Pathway ID	Description	GeneNumber	ProteinNumber
04010	MAPK signaling pathway	163	186
04510	Focal adhesion	158	219
04810	Regulation of actin cytoskeleton	157	203
04060	Cytokine-cytokine receptor interaction	131	143
01430	Cell Communication	114	166
04020	Calcium signaling pathway	110	131
04360	Axon guidance	102	122
04910	Insulin signaling pathway	97	110
04530	Tight junction	96	111
04514	Cell adhesion molecules (CAMs)	89	191
04310	Wnt signaling pathway	89	103
00230	Purine metabolism	81	92
04080	Neuroactive ligand-receptor interaction	80	90
04670	Leukocyte transendothelial migration	77	93
04512	ECM-receptor interaction	76	125
04630	Jak-STAT signaling pathway	76	81
04650	Natural killer cell mediated cytotoxicity	74	141
04540	Gap junction	73	79
04110	Cell cycle	72	77
04120	Ubiquitin mediated proteolysis	68	73
04912	GnRH signaling pathway	65	73
04610	Complement and coagulation cascades	65	104
04660	T cell receptor signaling pathway	62	71
04916	Melanogenesis	62	69
05222	Small cell lung cancer	61	88
04640	Hematopoietic cell lineage	61	78
04012	ErbB signaling pathway	60	67
05215	Prostate cancer	60	67
03010	Ribosome	57	63
04520	Adherens junction	57	75
04730	Long-term depression	57	65
00190	Oxidative phosphorylation	56	59
05214	Glioma	55	62
00010	Glycolysis / Gluconeogenesis	55	66
01030	Glycan structures - biosynthesis 1	55	60
04720	Long-term potentiation	55	62
05210	Colorectal cancer	55	57
04620	Toll-like receptor signaling pathway	55	61
04210	Apoptosis	54	61
04070	Phosphatidylinositol signaling system	54	58
04350	TGF-beta signaling pathway	54	59
05212	Pancreatic cancer	53	56
00500	Starch and sucrose metabolism	51	57
05220	Chronic myeloid leukemia	50	52
04664	Fc epsilon RI signaling pathway	48	49
03320	PPAR signaling pathway	48	59
05211	Renal cell carcinoma	48	50
05218	Melanoma	46	51
04370	VEGF signaling pathway	46	53
00240	Pyrimidine metabolism	45	49
04920	Adipocytokine signaling pathway	45	51
05130	Pathogenic Escherichia coli infection - EHEC	43	51
05131	Pathogenic Escherichia coli infection - EPEC	43	51
04612	Antigen processing and presentation	42	111
04115	p53 signaling pathway	42	46
05223	Non-small cell lung cancer	41	41
04662	B cell receptor signaling pathway	40	46
00350	Tyrosine metabolism	40	44
05120	Epithelial cell signaling in Helicobacter pylori infection	40	48
00071	Fatty acid metabolism	39	41
00980	Metabolism of xenobiotics by cytochrome P450	39	39
05213	Endometrial cancer	39	42
02010	ABC transporters - General	37	41
00380	Tryptophan metabolism	37	38
05221	Acute myeloid leukemia	36	38
00620	Pyruvate metabolism	35	41
05219	Bladder cancer	34	36
00051	Fructose and mannose metabolism	34	39
00280	Valine, leucine and isoleucine degradation	34	37
00561	Glycerolipid metabolism	34	42
00562	Inositol phosphate metabolism	33	37
04930	Type II diabetes mellitus	32	40
00564	Glycerophospholipid metabolism	31	34
00640	Propanoate metabolism	31	35
04150	mTOR signaling pathway	30	32
00260	Glycine, serine and threonine metabolism	30	33
00330	Arginine and proline metabolism	29	31
05110	Cholera - Infection	29	32
04940	Type I diabetes mellitus	29	94
00310	Lysine degradation	29	32
05320	Autoimmune thyroid disease	28	93
00790	Folate biosynthesis	27	28
00340	Histidine metabolism	27	28
05330	Allograft rejection	27	91
00120	Bile acid biosynthesis	27	28
05217	Basal cell carcinoma	27	27
00480	Glutathione metabolism	27	28
00650	Butanoate metabolism	27	27
05040	Huntington's disease	26	27
00590	Arachidonic acid metabolism	26	28
01510	Neurodegenerative Diseases	26	35
00970	Aminoacyl-tRNA biosynthesis	25	27
04330	Notch signaling pathway	25	28
04340	Hedgehog signaling pathway	25	25
03420	Nucleotide excision repair	24	24
00251	Glutamate metabolism	23	24
00052	Galactose metabolism	23	29
00530	Aminosugars metabolism	22	25
05332	Graft-versus-host disease	22	86
01032	Glycan structures - degradation	22	26
00220	Urea cycle and metabolism of amino groups	22	24
00410	beta-Alanine metabolism	21	21
00020	Citrate cycle (TCA cycle)	21	23
00252	Alanine and aspartate metabolism	21	21
05216	Thyroid cancer	21	28
03050	Proteasome	21	23
00510	N-Glycan biosynthesis	21	24
04740	Olfactory transduction	21	26
03030	DNA replication	20	21
04742	Taste transduction	20	26
00860	Porphyrin and chlorophyll metabolism	19	19
00360	Phenylalanine metabolism	19	19
04320	Dorso-ventral axis formation	19	20
01031	Glycan structures - biosynthesis 2	19	21
04130	SNARE interactions in vesicular transport	19	20
00030	Pentose phosphate pathway	18	24
00450	Selenoamino acid metabolism	18	19
00710	Carbon fixation	18	22
03022	Basal transcription factors	18	18
05010	Alzheimer's disease	18	26
05310	Asthma	17	18
00600	Sphingolipid metabolism	17	22
00150	Androgen and estrogen metabolism	17	17
00903	Limonene and pinene degradation	17	17
03410	Base excision repair	17	18
00591	Linoleic acid metabolism	15	15
00632	Benzoate degradation via CoA ligation	15	16
00512	O-Glycan biosynthesis	15	16
03430	Mismatch repair	15	17
00565	Ether lipid metabolism	14	16
00100	Biosynthesis of steroids	14	14
00624	1- and 2-Methylnaphthalene degradation	13	13
00960	Alkaloid biosynthesis II	13	14
00531	Glycosaminoglycan degradation	13	15
00271	Methionine metabolism	13	15
04614	Renin-angiotensin system	13	15
00910	Nitrogen metabolism	13	15
00641	3-Chloroacrylic acid degradation	13	13
00760	Nicotinate and nicotinamide metabolism	13	17
05020	Parkinson's disease	13	19
05030	Amyotrophic lateral sclerosis (ALS)	13	15
00361	gamma-Hexachlorocyclohexane degradation	12	13
00630	Glyoxylate and dicarboxylate metabolism	12	14
00272	Cysteine metabolism	12	13
00511	N-Glycan degradation	12	15
00930	Caprolactam degradation	12	12
05050	Dentatorubropallidoluysian atrophy (DRPLA)	11	16
05060	Prion disease	11	12
00720	Reductive carboxylate cycle (CO2 fixation)	11	11
00670	One carbon pool by folate	10	13
00534	Heparan sulfate biosynthesis	10	10
04950	Maturity onset diabetes of the young	10	12
00532	Chondroitin sulfate biosynthesis	9	9
00602	Glycosphingolipid biosynthesis - neo-lactoseries	9	10
00062	Fatty acid elongation in mitochondria	9	9
04140	Regulation of autophagy	8	8
00521	Streptomycin biosynthesis	8	11
00440	Aminophosphonate metabolism	8	8
03020	RNA polymerase	8	8
00626	Naphthalene and anthracene degradation	8	8
00053	Ascorbate and aldarate metabolism	8	8
01040	Biosynthesis of unsaturated fatty acids	8	8
00770	Pantothenate and CoA biosynthesis	8	8
00040	Pentose and glucuronate interconversions	7	7
00533	Keratan sulfate biosynthesis	7	8
04710	Circadian rhythm	7	9
00363	Bisphenol A degradation	7	7
00740	Riboflavin metabolism	7	8
00290	Valine, leucine and isoleucine biosynthesis	7	8
00603	Glycosphingolipid biosynthesis - globoseries	7	7
00604	Glycosphingolipid biosynthesis - ganglioseries	7	8
00563	Glycosylphosphatidylinositol(GPI)-anchor biosynthesis	7	8
00072	Synthesis and degradation of ketone bodies	6	6
00680	Methane metabolism	6	8
00460	Cyanoamino acid metabolism	6	8
00592	alpha-Linolenic acid metabolism	6	6
00140	C21-Steroid hormone metabolism	6	6
00920	Sulfur metabolism	6	6
00400	Phenylalanine, tyrosine and tryptophan biosynthesis	6	6
00625	Tetrachloroethene degradation	5	5
00900	Terpenoid biosynthesis	5	5
03060	Protein export	5	6
00750	Vitamin B6 metabolism	5	7
00520	Nucleotide sugars metabolism	4	5
00950	Alkaloid biosynthesis I	4	4
00430	Taurine and hypotaurine metabolism	4	4
00061	Fatty acid biosynthesis	4	5
00232	Caffeine metabolism	4	4
00940	Phenylpropanoid biosynthesis	3	3
00791	Atrazine degradation	3	3
00830	Retinol metabolism	3	4
00130	Ubiquinone biosynthesis	3	3
00730	Thiamine metabolism	3	3
00550	Peptidoglycan biosynthesis	3	4
00281	Geraniol degradation	3	3
00643	Styrene degradation	3	3
00401	Novobiocin biosynthesis	3	3
00031	Inositol metabolism	2	3
00471	D-Glutamine and D-glutamate metabolism	2	2
00601	Glycosphingolipid biosynthesis - lactoseries	2	3
00300	Lysine biosynthesis	2	2
00660	C5-Branched dibasic acid metabolism	1	1
00627	1,4-Dichlorobenzene degradation	1	1
00902	Monoterpenoid biosynthesis	1	1
00364	Fluorobenzoate degradation	1	1
00780	Biotin metabolism	1	2