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With development of functional genomics research, large-scale proteomics study is now widespread and presents significant challenges in data storage, exchange and analysis. Here we presented the IPED (Integrated Proteomics Exploring Database) platform dealing with processes information and result data of proteomics experiments. It was based on schema of proteome experimental data repository (PEDRo), and complied with general proteomics standard (GPS) drafted by proteomics standards committee of human proteome organization. In our work, three components were developed for IPED platform: IPED client editor, IPED server software, and IPED web interface. The client editor was used to generate extensible markup language (XML) data file satisfied with PEDRo and GPS schema; the server software was employed to parse XML data file and load information into core database; and the web interface was built for experimental result release, which provided a convenient graphic representation for data visiting. Given software convenience and data abundance, IPED is a powerful platform of data exchange and presents an important resource for proteomics community. In current release, IPED is available at http://www.biosino.org/iped2.
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