General Information
Project ID
OEP000099
Project Name
High-fidelity base editing mediated by Cpf1-cytidine deaminase fusion
Description
C-to-T base editing mediated by CRISPR/Cas9 base editors (BEs) needs a GC-rich PAM and the editing fidelity is compromised by unwanted indels and non-C-to-T substitutions. We developed CRISPR/Cpf1-based BEs to recognize a T-rich PAM and induce efficient C-to-T editing with few indels and/or non-C-to-T substitutions. The requirement of editing fidelity in therapeutic-related trials necessitates the development of CRISPR/Cpf1-based BEs which also facilitates base editing in AT-rich regions.
Used ID
NODEP00371765  
Project information
Experiments
1
Experiment ID
Experiment name
Experiment type
Create Date
OEX000100
NODEX_LI_1801251910
Genomic
2018-01-25
Samples
82
Sample ID
Sample Name
Sample Subject Type
Organism
Tissue
Create Date
OES002822
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002823
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002824
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002825
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002826
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002827
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002828
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002829
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002830
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002831
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002832
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002833
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002834
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002835
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002836
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002837
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002838
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002839
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002840
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002841
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002842
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002843
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002844
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002845
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002846
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002847
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002848
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002849
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002850
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002851
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002852
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002853
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002854
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002855
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002856
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002857
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002858
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002859
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002860
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002861
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002862
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002863
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002864
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002865
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002866
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002867
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002868
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002869
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002870
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002871
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002872
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002873
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002874
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002875
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002876
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002877
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002878
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002879
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002880
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002881
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002882
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002883
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002884
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002885
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002886
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002887
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002888
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002889
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002890
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002891
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002892
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002893
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002894
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002895
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002896
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002897
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002898
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002899
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002900
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002901
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002902
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
OES002903
NODES_LI_1801251910
Cell line
Homo sapiens
293FT cells
2018-01-25
Runs
164
Run ID
Run Name
Experiment
Sample
Data Num
Create Date
OER009194
NODER_LI_1801251910
OEX000100
OES002822
1
2018-01-25
OER009195
NODER_LI_1801251910
OEX000100
OES002822
1
2018-01-25
OER009196
NODER_LI_1801251910
OEX000100
OES002823
1
2018-01-25
OER009197
NODER_LI_1801251910
OEX000100
OES002823
1
2018-01-25
OER009198
NODER_LI_1801251910
OEX000100
OES002824
1
2018-01-25
OER009199
NODER_LI_1801251910
OEX000100
OES002824
1
2018-01-25
OER009200
NODER_LI_1801251910
OEX000100
OES002825
1
2018-01-25
OER009201
NODER_LI_1801251910
OEX000100
OES002825
1
2018-01-25
OER009202
NODER_LI_1801251910
OEX000100
OES002826
1
2018-01-25
OER009203
NODER_LI_1801251910
OEX000100
OES002826
1
2018-01-25
OER009204
NODER_LI_1801251910
OEX000100
OES002827
1
2018-01-25
OER009205
NODER_LI_1801251910
OEX000100
OES002827
1
2018-01-25
OER009206
NODER_LI_1801251910
OEX000100
OES002828
1
2018-01-25
OER009207
NODER_LI_1801251910
OEX000100
OES002828
1
2018-01-25
OER009208
NODER_LI_1801251910
OEX000100
OES002829
1
2018-01-25
OER009209
NODER_LI_1801251910
OEX000100
OES002829
1
2018-01-25
OER009210
NODER_LI_1801251910
OEX000100
OES002830
1
2018-01-25
OER009211
NODER_LI_1801251910
OEX000100
OES002830
1
2018-01-25
OER009212
NODER_LI_1801251910
OEX000100
OES002831
1
2018-01-25
OER009213
NODER_LI_1801251910
OEX000100
OES002831
1
2018-01-25
OER009214
NODER_LI_1801251910
OEX000100
OES002832
1
2018-01-25
OER009215
NODER_LI_1801251910
OEX000100
OES002832
1
2018-01-25
OER009216
NODER_LI_1801251910
OEX000100
OES002833
1
2018-01-25
OER009217
NODER_LI_1801251910
OEX000100
OES002833
1
2018-01-25
OER009218
NODER_LI_1801251910
OEX000100
OES002834
1
2018-01-25
OER009219
NODER_LI_1801251910
OEX000100
OES002834
1
2018-01-25
OER009220
NODER_LI_1801251910
OEX000100
OES002835
1
2018-01-25
OER009221
NODER_LI_1801251910
OEX000100
OES002835
1
2018-01-25
OER009222
NODER_LI_1801251910
OEX000100
OES002836
1
2018-01-25
OER009223
NODER_LI_1801251910
OEX000100
OES002836
1
2018-01-25
OER009224
NODER_LI_1801251910
OEX000100
OES002837
1
2018-01-25
OER009225
NODER_LI_1801251910
OEX000100
OES002837
1
2018-01-25
OER009226
NODER_LI_1801251910
OEX000100
OES002838
1
2018-01-25
OER009227
NODER_LI_1801251910
OEX000100
OES002838
1
2018-01-25
OER009228
NODER_LI_1801251910
OEX000100
OES002839
1
2018-01-25
OER009229
NODER_LI_1801251910
OEX000100
OES002839
1
2018-01-25
OER009230
NODER_LI_1801251910
OEX000100
OES002840
1
2018-01-25
OER009231
NODER_LI_1801251910
OEX000100
OES002840
1
2018-01-25
OER009232
NODER_LI_1801251910
OEX000100
OES002841
1
2018-01-25
OER009233
NODER_LI_1801251910
OEX000100
OES002841
1
2018-01-25
OER009234
NODER_LI_1801251910
OEX000100
OES002842
1
2018-01-25
OER009235
NODER_LI_1801251910
OEX000100
OES002842
1
2018-01-25
OER009236
NODER_LI_1801251910
OEX000100
OES002843
1
2018-01-25
OER009237
NODER_LI_1801251910
OEX000100
OES002843
1
2018-01-25
OER009238
NODER_LI_1801251910
OEX000100
OES002844
1
2018-01-25
OER009239
NODER_LI_1801251910
OEX000100
OES002844
1
2018-01-25
OER009240
NODER_LI_1801251910
OEX000100
OES002845
1
2018-01-25
OER009241
NODER_LI_1801251910
OEX000100
OES002845
1
2018-01-25
OER009242
NODER_LI_1801251910
OEX000100
OES002846
1
2018-01-25
OER009243
NODER_LI_1801251910
OEX000100
OES002846
1
2018-01-25
OER009244
NODER_LI_1801251910
OEX000100
OES002847
1
2018-01-25
OER009245
NODER_LI_1801251910
OEX000100
OES002847
1
2018-01-25
OER009246
NODER_LI_1801251910
OEX000100
OES002848
1
2018-01-25
OER009247
NODER_LI_1801251910
OEX000100
OES002848
1
2018-01-25
OER009248
NODER_LI_1801251910
OEX000100
OES002849
1
2018-01-25
OER009249
NODER_LI_1801251910
OEX000100
OES002849
1
2018-01-25
OER009250
NODER_LI_1801251910
OEX000100
OES002850
1
2018-01-25
OER009251
NODER_LI_1801251910
OEX000100
OES002850
1
2018-01-25
OER009252
NODER_LI_1801251910
OEX000100
OES002851
1
2018-01-25
OER009253
NODER_LI_1801251910
OEX000100
OES002851
1
2018-01-25
OER009254
NODER_LI_1801251910
OEX000100
OES002852
1
2018-01-25
OER009255
NODER_LI_1801251910
OEX000100
OES002852
1
2018-01-25
OER009256
NODER_LI_1801251910
OEX000100
OES002853
1
2018-01-25
OER009257
NODER_LI_1801251910
OEX000100
OES002853
1
2018-01-25
OER009258
NODER_LI_1801251910
OEX000100
OES002854
1
2018-01-25
OER009259
NODER_LI_1801251910
OEX000100
OES002854
1
2018-01-25
OER009260
NODER_LI_1801251910
OEX000100
OES002855
1
2018-01-25
OER009261
NODER_LI_1801251910
OEX000100
OES002855
1
2018-01-25
OER009262
NODER_LI_1801251910
OEX000100
OES002856
1
2018-01-25
OER009263
NODER_LI_1801251910
OEX000100
OES002856
1
2018-01-25
OER009264
NODER_LI_1801251910
OEX000100
OES002857
1
2018-01-25
OER009265
NODER_LI_1801251910
OEX000100
OES002857
1
2018-01-25
OER009266
NODER_LI_1801251910
OEX000100
OES002858
1
2018-01-25
OER009267
NODER_LI_1801251910
OEX000100
OES002858
1
2018-01-25
OER009268
NODER_LI_1801251910
OEX000100
OES002859
1
2018-01-25
OER009269
NODER_LI_1801251910
OEX000100
OES002859
1
2018-01-25
OER009270
NODER_LI_1801251910
OEX000100
OES002860
1
2018-01-25
OER009271
NODER_LI_1801251910
OEX000100
OES002860
1
2018-01-25
OER009272
NODER_LI_1801251910
OEX000100
OES002861
1
2018-01-25
OER009273
NODER_LI_1801251910
OEX000100
OES002861
1
2018-01-25
OER009274
NODER_LI_1801251910
OEX000100
OES002862
1
2018-01-25
OER009275
NODER_LI_1801251910
OEX000100
OES002862
1
2018-01-25
OER009276
NODER_LI_1801251910
OEX000100
OES002863
1
2018-01-25
OER009277
NODER_LI_1801251910
OEX000100
OES002863
1
2018-01-25
OER009278
NODER_LI_1801251910
OEX000100
OES002864
1
2018-01-25
OER009279
NODER_LI_1801251910
OEX000100
OES002864
1
2018-01-25
OER009280
NODER_LI_1801251910
OEX000100
OES002865
1
2018-01-25
OER009281
NODER_LI_1801251910
OEX000100
OES002865
1
2018-01-25
OER009282
NODER_LI_1801251910
OEX000100
OES002866
1
2018-01-25
OER009283
NODER_LI_1801251910
OEX000100
OES002866
1
2018-01-25
OER009284
NODER_LI_1801251910
OEX000100
OES002867
1
2018-01-25
OER009285
NODER_LI_1801251910
OEX000100
OES002867
1
2018-01-25
OER009286
NODER_LI_1801251910
OEX000100
OES002868
1
2018-01-25
OER009287
NODER_LI_1801251910
OEX000100
OES002868
1
2018-01-25
OER009288
NODER_LI_1801251910
OEX000100
OES002869
1
2018-01-25
OER009289
NODER_LI_1801251910
OEX000100
OES002869
1
2018-01-25
OER009290
NODER_LI_1801251910
OEX000100
OES002870
1
2018-01-25
OER009291
NODER_LI_1801251910
OEX000100
OES002870
1
2018-01-25
OER009292
NODER_LI_1801251910
OEX000100
OES002871
1
2018-01-25
OER009293
NODER_LI_1801251910
OEX000100
OES002871
1
2018-01-25
OER009294
NODER_LI_1801251910
OEX000100
OES002872
1
2018-01-25
OER009295
NODER_LI_1801251910
OEX000100
OES002872
1
2018-01-25
OER009296
NODER_LI_1801251910
OEX000100
OES002873
1
2018-01-25
OER009297
NODER_LI_1801251910
OEX000100
OES002873
1
2018-01-25
OER009298
NODER_LI_1801251910
OEX000100
OES002874
1
2018-01-25
OER009299
NODER_LI_1801251910
OEX000100
OES002874
1
2018-01-25
OER009300
NODER_LI_1801251910
OEX000100
OES002875
1
2018-01-25
OER009301
NODER_LI_1801251910
OEX000100
OES002875
1
2018-01-25
OER009302
NODER_LI_1801251910
OEX000100
OES002876
1
2018-01-25
OER009303
NODER_LI_1801251910
OEX000100
OES002876
1
2018-01-25
OER009304
NODER_LI_1801251910
OEX000100
OES002877
1
2018-01-25
OER009305
NODER_LI_1801251910
OEX000100
OES002877
1
2018-01-25
OER009306
NODER_LI_1801251910
OEX000100
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Author Information
Create Date
2018-01-25
Last Modified
2022-05-07
Submission
Li Yang
CAS-MPG Partner Institute for Computational Biology