General Information
- Sample ID
- OES014540
- Sample Name
- FUSCCTNBC194
- Subject type
- Human
Sample information
- Organism
- Homo sapiens
- Tissue
- breast
- ATTRIBUTES
-
age_at_surgery 45 gender female dis_mol_type mRNA_subtype:LAR,iCluster_subtype:iC8,SNF_Subtype:NA dis_phenotype Intrinsic_Subtype:Other karyo_type CNA_Subtype:Low_CIN - Projects
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1
Project ID Project name Submitter Date OEP000155 Genomic and Transcriptomic Landscape of Triple-Negative Breast Cancers: Subtypes and Treatment Strategies. Ma, Ding 2018-08-10 - Experiments
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7
Experiment ID Experiment name Experiment type Experiment protocol Date OEX001582 RNAseq Transcriptomic RNA library preparation was performed as described in the Illumina TruSeq Stranded Total RNA LT sample preparation kit with Ribo-Zero Gold (Illumina Inc., San Diego, CA, USA). 2019-01-29 OEX001583 WES Genomic N/A 2019-01-29 OEX001584 OncoScan Array Microarray Genome-wide copy number analysis was performed using an OncoScan CNV Assay Kit (Affymetrix, Santa Clara, CA, USA) according to the manufacturer’s recommendations. 2019-01-29 OEX015784 Lipidomics_positive Metabolomic N/A 2022-01-28 OEX015785 Lipidomics_negative Metabolomic N/A 2022-01-28 OEX015786 Untargeted polar metabolomics_positive Metabolomic N/A 2022-01-28 OEX015787 Untargeted polar metabolomics_negative Metabolomic N/A 2022-01-28 - Runs
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16
Run ID Run Name Project Experiment Sample Data Date OER025957 Lib_FUSCCTNBC194_tumor OEP000155 OEX001582 OES014540 2 2019-01-29 OER026361 Lib_FUSCCTNBC194_tumor_WES OEP000155 OEX001583 OES014540 2 2019-01-29 OER026638 Lib_FUSCCTNBC194.peripheral-blood_WES OEP000155 OEX001583 OES014540 2 2019-01-29 OER026933 FUSCCTNBC194_tumor OEP000155 OEX001584 OES014540 2 2019-01-29 OER242594 FUSCCTNBC194_LIP_tumor_POS.wiff OEP000155 OEX015784 OES014540 1 2022-01-28 OER242916 FUSCCTNBC194_LIP_normal_POS.wiff OEP000155 OEX015784 OES014540 1 2022-01-28 OER243073 FUSCCTNBC194_LIP_tumor_NEG.wiff OEP000155 OEX015785 OES014540 1 2022-01-28 OER243395 FUSCCTNBC194_LIP_normal_NEG.wiff OEP000155 OEX015785 OES014540 1 2022-01-28 OER243552 FUSCCTNBC194_LIP_tumor_POS.wiff.scan OEP000155 OEX015784 OES014540 1 2022-01-28 OER243874 FUSCCTNBC194_LIP_normal_POS.wiff.scan OEP000155 OEX015784 OES014540 1 2022-01-28 OER244031 FUSCCTNBC194_LIP_tumor_NEG.wiff.scan OEP000155 OEX015785 OES014540 1 2022-01-28 OER244353 FUSCCTNBC194_LIP_normal_NEG.wiff.scan OEP000155 OEX015785 OES014540 1 2022-01-28 OER244512 FUSCCTNBC194_POL_tumor_POS.d.tar.gz OEP000155 OEX015786 OES014540 1 2022-01-29 OER244834 FUSCCTNBC194_POL_normal_POS.d.tar.gz OEP000155 OEX015786 OES014540 1 2022-01-29 OER244991 FUSCCTNBC194_POL_tumor_NEG.d.tar.gz OEP000155 OEX015787 OES014540 1 2022-01-29 OER245313 FUSCCTNBC194_POL_normal_NEG.d.tar.gz OEP000155 OEX015787 OES014540 1 2022-01-29
Author Information
- Create Date
- 2019-01-29
- Submission
- Ding Ma,Fudan University Shanghai Cancer Center