General Information
- Sample ID
- OES014676
- Sample Name
- FUSCCTNBC406
- Subject type
- Human
Sample information
- Organism
- Homo sapiens
- Tissue
- breast
- ATTRIBUTES
-
age_at_surgery 49 gender female dis_mol_type mRNA_subtype:BLIS,iCluster_subtype:iC4,SNF_Subtype:SC5 dis_phenotype Intrinsic_Subtype:Basal karyo_type CNA_Subtype:Chr13q34_amp - Projects
-
1
Project ID Project name Submitter Date OEP000155 Genomic and Transcriptomic Landscape of Triple-Negative Breast Cancers: Subtypes and Treatment Strategies. Ma, Ding 2018-08-10 - Experiments
-
7
Experiment ID Experiment name Experiment type Experiment protocol Date OEX001582 RNAseq Transcriptomic RNA library preparation was performed as described in the Illumina TruSeq Stranded Total RNA LT sample preparation kit with Ribo-Zero Gold (Illumina Inc., San Diego, CA, USA). 2019-01-29 OEX001583 WES Genomic N/A 2019-01-29 OEX001584 OncoScan Array Microarray Genome-wide copy number analysis was performed using an OncoScan CNV Assay Kit (Affymetrix, Santa Clara, CA, USA) according to the manufacturer’s recommendations. 2019-01-29 OEX015784 Lipidomics_positive Metabolomic N/A 2022-01-28 OEX015785 Lipidomics_negative Metabolomic N/A 2022-01-28 OEX015786 Untargeted polar metabolomics_positive Metabolomic N/A 2022-01-28 OEX015787 Untargeted polar metabolomics_negative Metabolomic N/A 2022-01-28 - Runs
-
10
Run ID Run Name Project Experiment Sample Data Date OER026102 Lib_FUSCCTNBC406_tumor OEP000155 OEX001582 OES014676 2 2019-01-29 OER026481 Lib_FUSCCTNBC406_tumor_WES OEP000155 OEX001583 OES014676 2 2019-01-29 OER026758 Lib_FUSCCTNBC406.peripheral-blood_WES OEP000155 OEX001583 OES014676 2 2019-01-29 OER027058 FUSCCTNBC406_tumor OEP000155 OEX001584 OES014676 2 2019-01-29 OER242777 FUSCCTNBC406_LIP_tumor_POS.wiff OEP000155 OEX015784 OES014676 1 2022-01-28 OER243256 FUSCCTNBC406_LIP_tumor_NEG.wiff OEP000155 OEX015785 OES014676 1 2022-01-28 OER243735 FUSCCTNBC406_LIP_tumor_POS.wiff.scan OEP000155 OEX015784 OES014676 1 2022-01-28 OER244214 FUSCCTNBC406_LIP_tumor_NEG.wiff.scan OEP000155 OEX015785 OES014676 1 2022-01-28 OER244695 FUSCCTNBC406_POL_tumor_POS.d.tar.gz OEP000155 OEX015786 OES014676 1 2022-01-29 OER245174 FUSCCTNBC406_POL_tumor_NEG.d.tar.gz OEP000155 OEX015787 OES014676 1 2022-01-29
Author Information
- Create Date
- 2019-01-29
- Submission
- Ding Ma,Fudan University Shanghai Cancer Center