General Information
- Sample ID
- OES014753
- Sample Name
- FUSCCTNBC116
- Subject type
- Human
Sample information
- Organism
- Homo sapiens
- Tissue
- breast
- ATTRIBUTES
-
age_at_surgery 72 gender female dis_mol_type mRNA_subtype:LAR,iCluster_subtype:iC3,SNF_Subtype:SC7 dis_phenotype Intrinsic_Subtype:Basal karyo_type CNA_Subtype:Chr8p21_del - Projects
-
1
Project ID Project name Submitter Date OEP000155 Genomic and Transcriptomic Landscape of Triple-Negative Breast Cancers: Subtypes and Treatment Strategies. Ma, Ding 2018-08-10 - Experiments
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7
Experiment ID Experiment name Experiment type Experiment protocol Date OEX001582 RNAseq Transcriptomic RNA library preparation was performed as described in the Illumina TruSeq Stranded Total RNA LT sample preparation kit with Ribo-Zero Gold (Illumina Inc., San Diego, CA, USA). 2019-01-29 OEX001583 WES Genomic N/A 2019-01-29 OEX001584 OncoScan Array Microarray Genome-wide copy number analysis was performed using an OncoScan CNV Assay Kit (Affymetrix, Santa Clara, CA, USA) according to the manufacturer’s recommendations. 2019-01-29 OEX015784 Lipidomics_positive Metabolomic N/A 2022-01-28 OEX015785 Lipidomics_negative Metabolomic N/A 2022-01-28 OEX015786 Untargeted polar metabolomics_positive Metabolomic N/A 2022-01-28 OEX015787 Untargeted polar metabolomics_negative Metabolomic N/A 2022-01-28 - Runs
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17
Run ID Run Name Project Experiment Sample Data Date OER026190 Lib_FUSCCTNBC116_normal OEP000155 OEX001582 OES014753 2 2019-01-29 OER026191 Lib_FUSCCTNBC116_tumor OEP000155 OEX001582 OES014753 2 2019-01-29 OER026317 Lib_FUSCCTNBC116_tumor_WES OEP000155 OEX001583 OES014753 2 2019-01-29 OER026594 Lib_FUSCCTNBC116.peripheral-blood_WES OEP000155 OEX001583 OES014753 2 2019-01-29 OER027007 FUSCCTNBC116_tumor OEP000155 OEX001584 OES014753 2 2019-01-29 OER242584 FUSCCTNBC116_LIP_tumor_POS.wiff OEP000155 OEX015784 OES014753 1 2022-01-28 OER242909 FUSCCTNBC116_LIP_normal_POS.wiff OEP000155 OEX015784 OES014753 1 2022-01-28 OER243063 FUSCCTNBC116_LIP_tumor_NEG.wiff OEP000155 OEX015785 OES014753 1 2022-01-28 OER243388 FUSCCTNBC116_LIP_normal_NEG.wiff OEP000155 OEX015785 OES014753 1 2022-01-28 OER243542 FUSCCTNBC116_LIP_tumor_POS.wiff.scan OEP000155 OEX015784 OES014753 1 2022-01-28 OER243867 FUSCCTNBC116_LIP_normal_POS.wiff.scan OEP000155 OEX015784 OES014753 1 2022-01-28 OER244021 FUSCCTNBC116_LIP_tumor_NEG.wiff.scan OEP000155 OEX015785 OES014753 1 2022-01-28 OER244346 FUSCCTNBC116_LIP_normal_NEG.wiff.scan OEP000155 OEX015785 OES014753 1 2022-01-28 OER244502 FUSCCTNBC116_POL_tumor_POS.d.tar.gz OEP000155 OEX015786 OES014753 1 2022-01-29 OER244827 FUSCCTNBC116_POL_normal_POS.d.tar.gz OEP000155 OEX015786 OES014753 1 2022-01-29 OER244981 FUSCCTNBC116_POL_tumor_NEG.d.tar.gz OEP000155 OEX015787 OES014753 1 2022-01-29 OER245306 FUSCCTNBC116_POL_normal_NEG.d.tar.gz OEP000155 OEX015787 OES014753 1 2022-01-29
Author Information
- Create Date
- 2019-01-29
- Submission
- Ding Ma,Fudan University Shanghai Cancer Center