General Information
- Sample ID
- OES014763
- Sample Name
- FUSCCTNBC179
- Subject type
- Human
Sample information
- Organism
- Homo sapiens
- Tissue
- breast
- ATTRIBUTES
-
age_at_surgery 71 gender female dis_mol_type mRNA_subtype:BLIS,iCluster_subtype:iC1,SNF_Subtype:SC2 dis_phenotype Intrinsic_Subtype:Basal karyo_type CNA_Subtype:Chr13q34_amp - Projects
-
1
Project ID Project name Submitter Date OEP000155 Genomic and Transcriptomic Landscape of Triple-Negative Breast Cancers: Subtypes and Treatment Strategies. Ma, Ding 2018-08-10 - Experiments
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7
Experiment ID Experiment name Experiment type Experiment protocol Date OEX001582 RNAseq Transcriptomic RNA library preparation was performed as described in the Illumina TruSeq Stranded Total RNA LT sample preparation kit with Ribo-Zero Gold (Illumina Inc., San Diego, CA, USA). 2019-01-29 OEX001583 WES Genomic N/A 2019-01-29 OEX001584 OncoScan Array Microarray Genome-wide copy number analysis was performed using an OncoScan CNV Assay Kit (Affymetrix, Santa Clara, CA, USA) according to the manufacturer’s recommendations. 2019-01-29 OEX015784 Lipidomics_positive Metabolomic N/A 2022-01-28 OEX015785 Lipidomics_negative Metabolomic N/A 2022-01-28 OEX015786 Untargeted polar metabolomics_positive Metabolomic N/A 2022-01-28 OEX015787 Untargeted polar metabolomics_negative Metabolomic N/A 2022-01-28 - Runs
-
17
Run ID Run Name Project Experiment Sample Data Date OER026211 Lib_FUSCCTNBC179_normal OEP000155 OEX001582 OES014763 2 2019-01-29 OER026212 Lib_FUSCCTNBC179_tumor OEP000155 OEX001582 OES014763 2 2019-01-29 OER026354 Lib_FUSCCTNBC179_tumor_WES OEP000155 OEX001583 OES014763 2 2019-01-29 OER026631 Lib_FUSCCTNBC179.peripheral-blood_WES OEP000155 OEX001583 OES014763 2 2019-01-29 OER027002 FUSCCTNBC179_tumor OEP000155 OEX001584 OES014763 2 2019-01-29 OER242729 FUSCCTNBC179_LIP_tumor_POS.wiff OEP000155 OEX015784 OES014763 1 2022-01-28 OER242901 FUSCCTNBC179_LIP_normal_POS.wiff OEP000155 OEX015784 OES014763 1 2022-01-28 OER243208 FUSCCTNBC179_LIP_tumor_NEG.wiff OEP000155 OEX015785 OES014763 1 2022-01-28 OER243380 FUSCCTNBC179_LIP_normal_NEG.wiff OEP000155 OEX015785 OES014763 1 2022-01-28 OER243687 FUSCCTNBC179_LIP_tumor_POS.wiff.scan OEP000155 OEX015784 OES014763 1 2022-01-28 OER243859 FUSCCTNBC179_LIP_normal_POS.wiff.scan OEP000155 OEX015784 OES014763 1 2022-01-28 OER244166 FUSCCTNBC179_LIP_tumor_NEG.wiff.scan OEP000155 OEX015785 OES014763 1 2022-01-28 OER244338 FUSCCTNBC179_LIP_normal_NEG.wiff.scan OEP000155 OEX015785 OES014763 1 2022-01-28 OER244647 FUSCCTNBC179_POL_tumor_POS.d.tar.gz OEP000155 OEX015786 OES014763 1 2022-01-29 OER244819 FUSCCTNBC179_POL_normal_POS.d.tar.gz OEP000155 OEX015786 OES014763 1 2022-01-29 OER245126 FUSCCTNBC179_POL_tumor_NEG.d.tar.gz OEP000155 OEX015787 OES014763 1 2022-01-29 OER245298 FUSCCTNBC179_POL_normal_NEG.d.tar.gz OEP000155 OEX015787 OES014763 1 2022-01-29
Author Information
- Create Date
- 2019-01-29
- Submission
- Ding Ma,Fudan University Shanghai Cancer Center