RS# (dbSNP) #AlleleID Name GeneSymbol LastEvaluated PhenotypeIDS PhenotypeList Origin Chromosome Start Flank 121434259 18324 NM_000268.3(NF2):c.169C>T (p.Arg57Ter) NF2 Jul 18, 2016 Human Phenotype Ontology:HP:0002858,MedGen:C0025286,Orphanet:ORPHA2495;MedGen:CN517202 Meningioma;not provided germline;somatic 22 29636805 TTTGATTTGGTGTGCCGGACTCTGGGGCTCCGAGAAACCTGGTTCTTTGGACTGCAGTACA -1 481233 NM_172349.2(NSD1):c.3964C>T (p.His1322Tyr) NSD1 Oct 04, 2017 MedGen:CN035106,OMIM:117550 Sotos syndrome 1 unknown 5 177256956 AATTTATCTTCTTTTGGCTTCTCAGGAATCCATACCTGTTTTGTATGTAAGCAGAGTGGGG 587781363 150621 NM_000051.3(ATM):c.8473C>T (p.Gln2825Ter) ATM Jul 31, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Ataxia-telangiectasia syndrome;Hereditary cancer-predisposing syndrome;not provided germline 11 108345797 GAGAAATATGAAGTCTTCATGGATGTTTGCCAAAATTTTCAACCAGTTTTCCGTTACTTCT 1057519501 362229 NM_003165.3(STXBP1):c.1006C>T (p.Gln336Ter) STXBP1 Dec 16, 2015 MedGen:C2677326,OMIM:612164 Early infantile epileptic encephalopathy 4 unknown 9 127672093 GACCTGTCCCAGATGCTGAAGAAGATGCCTCAGTACCAGAAAGAGCTCAGCAAGGTATGGC 797044929 205276 NM_000217.2(KCNA1):c.1202C>T (p.Ala401Val) KCNA1 Jul 30, 2013 MeSH:D030342,MedGen:C0950123 Inborn genetic diseases germline 12 4912580 TGTGTGCCATCGCTGGTGTGCTAACAATTGCCCTGCCCGTACCTGTCATTGTGTCCAATTT 104893884 22568 NM_004465.1(FGF10):c.577C>T (p.Arg193Ter) FGF10 Feb 01, 2005 MedGen:C0158667,OMIM:180920,Orphanet:ORPHA86815,SNOMED CT:22589009 Congenital absence of salivary gland germline 5 44305045 AAAGGAGCTCCAAGGAGAGGACAGAAAACACGAAGGAAAAACACCTCTGCTCACTTTCTTC -1 457078 NM_000238.3(KCNH2):c.2062C>T (p.Gln688Ter) KCNH2 Jun 16, 2017 MeSH:D008133,MedGen:C0023976,SNOMED CT:9651007 Long QT syndrome germline 7 150951004 CTGCGGGTGCGGGAGTTCATCCGCTTCCACCAGATCCCCAATCCCCTGCGCCAGCGCCTCG -1 478499 NM_002878.3(RAD51D):c.178C>T (p.Gln60Ter) RAD51D Jun 07, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 17 35118586 CTGGTTGCCCTGAGGCGGGTGCTGCTGGCTCAGTTCTCGGCTTTCCCCGTGAATGGCGCTG 80356774 24102 NM_001876.3(CPT1A):c.298C>T (p.Gln100Ter) CPT1A Sep 10, 2013 MedGen:C0342789,OMIM:255120,SNOMED CT:238001003 Carnitine palmitoyltransferase I deficiency germline 11 68807622 GTCTGTCTCCACAGCAACTGCATGTCCAGCCAGACGAAGAACGTGGTCAGCGGCGTGCTGT 1064794260 407780 NM_000264.4(PTCH1):c.2833C>T (p.Arg945Ter) PTCH1 Nov 22, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline 9 95459654 GCTGCCTCCCAGGCCAACATCCGGCCACACCGACCAGAATGGGTCCACGACAAAGCCGACT 398123888 100411 NM_004006.2(DMD):c.2419C>T (p.Gln807Ter) DMD May 06, 2013 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009;MedGen:C3668940,OMIM:302045;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Becker muscular dystrophy;Dilated cardiomyopathy 3B;Duchenne muscular dystrophy germline X 32491480 AATGCAGATAGCATCAAACAAGCCTCAGAACAACTGAACAGCCGGTGGATCGAATTCTGCC 104894538 22473 NM_002968.2(SALL1):c.967C>T (p.Gln323Ter) SALL1 Feb 15, 2004 MedGen:C1862683 Townes-Brocks-branchiootorenal-like syndrome germline 16 51141255 GTGAAACAGCTACCCCCAATCCAGCTACCTCAGAGCAGTTCTGGCAACACCATCATTCCAT 121434332 16725 NM_000528.3(MAN2B1):c.1915C>T (p.Gln639Ter) MAN2B1 Oct 01, 1998 MedGen:C0024748,OMIM:248500,Orphanet:ORPHA61,SNOMED CT:124466001 Deficiency of alpha-mannosidase germline 19 12652376 ATGAATCAGCAACTCCTGCTGCCTGTTCGCCAGACCTTCTTCTGGTAAGGGAAGATCACCA 132630262 26215 NM_000117.2(EMD):c.130C>T (p.Gln44Ter) EMD Jul 25, 2016 MedGen:CN069573,Orphanet:ORPHA98863;MedGen:CN517202 Emery-Dreifuss muscular dystrophy, X-linked;not provided germline;unknown X 154379737 TACGAGAAGAAGATCTTCGAGTACGAGACCCAGAGGCGGCGGCTCTCGCCCCCCAGCTCGT 137853310 26786 NM_001110556.1(FLNA):c.544C>T (p.Gln182Ter) FLNA Jan 11, 2010 MedGen:C1848213,OMIM:300049,OMIM:300537,SNOMED CT:448227009 Periventricular nodular heterotopia 1 germline X 154367920 CTCCTGGGCTGGATCCAGAACAAGCTGCCGCAGCTGCCCATCACCAACTTCAGCCGGGACT 587777490 143196 NM_001199835.1(SNX10):c.46C>T (p.Arg16Ter) SNX10 Jan 01, 2013 MedGen:C3554478,OMIM:615085 Osteopetrosis, autosomal recessive 8 germline 7 26360996 CCATTACAGGAATTTGTAAGTGTCTGGGTTCGAGATCCTAGGATTCAGAAGGAGGACTTCT 387907279 45772 NM_014967.4(FAN1):c.2245C>T (p.Arg749Ter) FAN1 Sep 13, 2012 MedGen:C3553774,OMIM:614817,Orphanet:ORPHA401996 Interstitial nephritis, karyomegalic germline 15 30925199 AGAACGGGACACCGCCTTTCACTGTATCAGCGAGCCGTGCGCCTGCGAGAGTCTCCGAGCT -1 481772 NM_004415.3(DSP):c.4999C>T (p.Gln1667Ter) DSP Dec 28, 2017 MedGen:CN517202 not provided germline 6 7581189 CTCTCTTCTGAGGTCGAGGCCCTGAGGCGGCAGTTACTCCAGGAACAGGAAAGTGTCAAAC 67120076 26039 NM_000531.5(OTC):c.674C>T (p.Pro225Leu) OTC May 09, 2016 MedGen:C0268542,OMIM:311250,Orphanet:ORPHA664,SNOMED CT:80908008;MedGen:CN517202 Ornithine carbamoyltransferase deficiency;not provided germline;inherited;unknown X 38408752 TTAAATTCTTCCTCCTTTAGGGTTATGAGCCGGATGCTAGTGTAACCAAGTTGGCAGAGCA 104893847 31075 NM_000406.2(GNRHR):c.959C>T (p.Pro320Leu) GNRHR Jul 01, 2004 Human Phenotype Ontology:HP:0000044,MedGen:C0271623,OMIM:146110,Orphanet:ORPHA181387,SNOMED CT:33927004 Hypogonadotropic hypogonadism 7 with or without anosmia germline 4 67740508 TCTTTGCCTTTTTAAACCCATGCTTTGATCCACTTATCTATGGATATTTTTCTCTGTGATT 863224999 213864 NM_004006.2(DMD):c.4729C>T (p.Arg1577Ter) DMD Apr 18, 2017 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001;MedGen:CN517202 Duchenne muscular dystrophy;not provided germline X 32380626 GAGAAATGCTTGAAATTGTCCCGTAAGATGCGAAAGGAAATGAATGTCTTGACAGAATGGC 267606718 15095 NM_001194998.1(CEP152):c.2959C>T (p.Arg987Ter) CEP152 Jul 09, 2010 MedGen:C3553886,OMIM:614852 Primary autosomal recessive microcephaly 9 germline 15 48756289 CAAGATTACCGGCAATTTTTAGATGATCACCGAAATAAAATTAATGAGGTGCTTGCGGCAG 121913601 29227 NM_000530.7(MPZ):c.233C>T (p.Ser78Leu) MPZ Jun 19, 2017 MedGen:C0270912,OMIM:118200,Orphanet:ORPHA101082,SNOMED CT:42986003;MedGen:C4016266;MedGen:C0751036,Orphanet:ORPHA65753,SNOMED CT:398040009;MedGen:CN517202 Charcot-Marie-Tooth disease, demyelinating, type 1b;Charcot-Marie-Tooth disease, type 1b, with focally folded myelin sheaths;Charcot-Marie-Tooth disease, type I;not provided germline 1 161307259 ACCAGCCCGAAGGGGGCAGAGATGCCATTTCGGTGAGTGCCTGGGGGAATCCTGGGGTTGG 773404494 229815 NM_033056.3(PCDH15):c.3358C>T (p.Arg1120Ter) PCDH15 Feb 24, 2015 MedGen:C1865885,OMIM:602083 Usher syndrome, type 1F germline 10 53938830 GATTCCCTGGAAGTGGTCCTTGCCAATCTCCGAGTTCCTTCAAAAAGTAAGTTATACTACT -1 433234 NM_000267.3(NF1):c.334C>T (p.Gln112Ter) NF1 Sep 14, 2016 MedGen:CN169374 not specified germline 17 31163231 ATGAGATTAGATGAAACGATGCTGGTCAAACAGTTGCTGCCAGAAATCTGCCATTTTCTTC 128626247 26295 NM_004006.2(DMD):c.4213C>T (p.Gln1405Ter) DMD Jan 01, 1994 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Duchenne muscular dystrophy germline X 32411772 GCTTATATTGCAGACAAGGTGGACGCAGCTCAAATGCCTCAGGAAGCCCAGGCAAGTACAT 80358419 65760 NM_000059.3(BRCA2):c.1261C>T (p.Gln421Ter) BRCA2 Sep 08, 2016 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome germline;somatic 13 32332739 ATACCCCTATTGCATATTTCTTCATGTGACCAAAATATTTCAGAAAAAGACCTATTAGACA -1 434539 NM_001256442.1(PRRT2):c.959C>T (p.Ala320Val) PRRT2 - MedGen:C1868682,OMIM:128200;Gene:81865,MedGen:C1853995,OMIM:605751 Dystonia 10;Seizures, benign familial infantile, 2 paternal 16 29814412 GCCGGGTAGCCAAGCTCTTAAGCATCGTGGCGCTGGTGGGGGGAGTCCTCATCATCATCGC 200053119 201795 NM_005506.3(SCARB2):c.361C>T (p.Arg121Ter) SCARB2 Mar 07, 2016 MedGen:C0751779,OMIM:254900,Orphanet:ORPHA163696;MedGen:CN517202 Epilepsy, progressive myoclonic 4, with or without renal failure;not provided germline 4 76181016 GCTGTTAGCAACAAGGCCTATGTTTTTGAACGAGACCAATCTGTTGGAGACCCTAAAATTG 387906689 38848 NM_005213.3(CSTA):c.256C>T (p.Gln86Ter) CSTA Oct 07, 2011 MedGen:C1842797,OMIM:607936 Exfoliative ichthyosis, autosomal recessive, ichthyosis bullosa of siemens-like germline 3 122341526 CAAAATGAGGACTTGGTACTTACTGGATACCAGGTTGACAAAAACAAGGATGACGAGCTGA 587784482 168985 NM_006009.3(TUBA1A):c.1148C>T (p.Ala383Val) TUBA1A Oct 31, 2014 Human Phenotype Ontology:HP:0002269,MedGen:C1837249;MedGen:C1969029,OMIM:611603,Orphanet:ORPHA102011 Abnormality of neuronal migration;Lissencephaly 3 de novo;germline 12 49185218 GAGCTGTGTGCATGCTGAGCAACACCACAGCCATTGCTGAGGCCTGGGCTCGCCTGGACCA 368085185 215173 NM_015909.3(NBAS):c.409C>T (p.Arg137Trp) NBAS Oct 18, 2015 MedGen:C3809651,OMIM:616483,Orphanet:ORPHA464724 Infantile liver failure syndrome 2 germline 2 15539327 GTTCCGAAAGACCCGAAACCCCAGTGGAGACGGGTAGCATGGAGTTACGATTGTACCCTAC 1060500759 397472 NM_020975.4(RET):c.2689C>T (p.Arg897Ter) RET Mar 13, 2017 MedGen:CN073359,Orphanet:ORPHA653,SNOMED CT:61808009 Multiple endocrine neoplasia, type 2 germline 10 43120162 AAGATGAAGATTTCGGATTTCGGCTTGTCCCGAGATGTTTATGAAGAGGATTCCTACGTGA 772229371 264988 NM_013275.5(ANKRD11):c.1801C>T (p.Arg601Ter) ANKRD11 Jul 07, 2017 MedGen:CN517202 not provided germline 16 89284741 CCAGTGAGGAAGAGGCAGGAGCACAGGAAGCGAGCCTCCCTGTCGGAGAAGAAGAGCCCCT 121913323 22494 NM_000455.4(STK11):c.508C>T (p.Gln170Ter) STK11 Jul 14, 2015 Gene:1243,MedGen:C1835047,OMIM:155600;MeSH:D009369,MedGen:C0027651,SNOMED CT:108369006 Cutaneous malignant melanoma 1;Neoplasm somatic 19 1220416 CTGATTGACGGCCTGGAGTACCTGCATAGCCAGGGCATTGTGCACAAGGACATCAAGCCGG 794726790 187829 NM_001165963.1(SCN1A):c.1516C>T (p.Gln506Ter) SCN1A Dec 20, 2014 MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002 Severe myoclonic epilepsy in infancy de novo 2 166045189 GAAAGAAGAAATCGGAGGAAGAAAAGAAAACAGAAAGAGCAGTCTGGTGGGGAAGAGAAAG 267607084 16150 NM_025137.3(SPG11):c.118C>T (p.Gln40Ter) SPG11 Nov 10, 2015 Gene:255,MedGen:C1865864,OMIM:602099;MedGen:C4225253,OMIM:616668,Orphanet:ORPHA466775;MedGen:C1858479,OMIM:604360,Orphanet:ORPHA2822 Amyotrophic lateral sclerosis type 5;Charcot-Marie-Tooth disease, axonal type 2X;Spastic paraplegia 11, autosomal recessive germline 15 44663530 TTGGTGCCAGTCCCCGCCGAGGCGATGGGGCAGCTCGGCTCCCGGGCGCAGCTGCGCACAC 926027867 424457 NM_171825.2(CAMK2A):c.635C>T (p.Pro212Leu) CAMK2A Jul 03, 2017 Human Phenotype Ontology:HP:0001249,MedGen:C1843367 Intellectual disability de novo 5 150251808 TCCTGTACATCCTGCTGGTTGGGTACCCCCCGTTCTGGGATGAGGACCAGCACCGCCTGTA 11543022 26114 NM_001128834.2(PLP1):c.44C>T (p.Pro15Leu) PLP1 Dec 01, 1989 Human Phenotype Ontology:HP:0003269,MedGen:C0205711,OMIM:312080,Orphanet:ORPHA702,SNOMED CT:64855000 Pelizaeus-Merzbacher disease germline X 103785621 AGTGCTGTGCAAGATGTCTGGTAGGGGCCCCCTTTGCTTCCCTGGTGGCCACTGGATTGTG 786203570 222618 NM_000267.3(NF1):c.5458C>T (p.Gln1820Ter) NF1 Jul 18, 2017 MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003 Neurofibromatosis, type 1 germline 17 31327751 TGGGAACTGTCACAGCCCGACTCTATCCCCCAACACACCAAGATTCGGCCAAAAGATGTCC 104893794 28089 NM_000539.3(RHO):c.511C>T (p.Pro171Ser) RHO May 15, 1994 MedGen:C3151001,OMIM:613731 Retinitis pigmentosa 4 germline 3 129531025 TGGGTCATGGCGCTGGCCTGCGCCGCACCCCCACTCGCCGGCTGGTCCAGGTAATGGCACT 397517963 228349 NM_206933.2(USH2A):c.1000C>T (p.Arg334Trp) USH2A Apr 27, 2015 MedGen:C1848634,OMIM:276901 Usher syndrome, type 2A germline 1 216325448 GCAGGAGACACAGCTGATAATAGAGTGTCACGGTTGAATCCTGAAGCCCATCCTCTCTCTT 72549326 31347 NM_006894.5(FMO3):c.458C>T (p.Pro153Leu) FMO3 Jun 14, 2016 Human Phenotype Ontology:HP:0003614,MedGen:C0342739,OMIM:602079,Orphanet:ORPHA468726,SNOMED CT:237959005 Trimethylaminuria germline 1 171107811 TAATGGTTTGTTCCGGACATCATGTGTATCCCAACCTACCAAAAGAGTCCTTTCCAGGTAA 137853071 22506 NM_002241.4(KCNJ10):c.889C>T (p.Arg297Cys) KCNJ10 Mar 21, 2016 MedGen:C2748572,OMIM:612780,Orphanet:ORPHA199343;MedGen:CN517202 SeSAME syndrome;not provided germline 1 160041644 GTGGAGTCCACCAGTGCCACCTGTCAGGTGCGCACTTCCTACCTGCCAGAGGAGATCCTTT 80338756 23301 NM_201380.3(PLEC):c.6328C>T (p.Arg2110Trp) PLEC Oct 04, 2017 MedGen:C0432317,OMIM:131950,Orphanet:ORPHA79401,SNOMED CT:398071000;MedGen:CN517202 Epidermolysis bullosa simplex, Ogna type;not provided germline 8 143924012 GAGCAGGCCGAGCTGGAGGCTGCGAGGCAGCGGCAGCTGGCGGCGGAGGAGGAGCGGCGGC 587783089 166462 NM_003159.2(CDKL5):c.700C>T (p.Gln234Ter) CDKL5 Aug 07, 2013 MedGen:CN517202 not provided germline X 18588099 CAGAAGGTGCTAGGACCACTTCCATCTGAGCAGATGAAGCTTTTCTACAGTAATCCTCGCT 28937282 25268 NM_000132.3(F8):c.1730C>T (p.Ser577Phe) F8 Feb 01, 1993 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154956979 TTGGCCCTCTCCTCATCTGCTACAAAGAATCTGTAGATCAAAGAGGAAACCAGGTGAGTTC 63751438 29295 NM_016835.4(MAPT):c.1852C>T (p.Pro618Ser) MAPT Dec 01, 2005 Human Phenotype Ontology:HP:0002145,MedGen:C0338451,OMIM:600274,Orphanet:ORPHA282,SNOMED CT:230270009;MedGen:CN517202 Frontotemporal dementia;not provided germline 17 46010388 TGTGGCTCAAAGGATAATATCAAACACGTCCCGGGAGGCGGCAGTGTGAGTACCTTCACAC 373462792 54936 NM_016239.3(MYO15A):c.8767C>T (p.Arg2923Ter) MYO15A Feb 04, 2015 MedGen:CN043648,Orphanet:ORPHA87884 Nonsyndromic hearing loss and deafness germline 17 18157209 CGCAGGAAGGTGGTGTACCTGGAGGAGCTGCGACGTAGAGGCCCCGACTTTGGTGTGTGCC 121908915 21400 NM_002977.3(SCN9A):c.4391C>T (p.Thr1464Ile) SCN9A Dec 07, 2006 MedGen:C1833661,OMIM:167400,Orphanet:ORPHA46348 Paroxysmal extreme pain disorder germline 2 166204439 TTTACCTTGGAGGTCAAGACATCTTTATGACAGAAGAACAGAAGAAATACTATAATGCAAT 755117226 389197 NM_000508.4(FGA):c.502C>T (p.Arg168Ter) FGA Sep 26, 2015 MedGen:C2584774,OMIM:202400,Orphanet:ORPHA98880 Afibrinogenemia, congenital germline 4 154587520 AATGTTAGAGCTCAGTTGGTTGATATGAAACGACTGGAGGTAAGTATGTGGCTGTGGTCCC 141945265 48394 NM_012472.5(LRRC6):c.574C>T (p.Gln192Ter) LRRC6 Nov 16, 2012 MedGen:C3543826,OMIM:614935 Ciliary dyskinesia, primary, 19 germline 8 132632819 AAACTCAAGGAAGAGGCTCAGAGGAAACACCAAGAAGAGGATAAAAATGAAGACAAGAGAA 104894902 26467 NM_001129765.1(NSDHL):c.628C>T (p.Gln210Ter) NSDHL Feb 14, 2000 MedGen:C0265267,OMIM:308050,Orphanet:ORPHA139,SNOMED CT:17608003 Child syndrome germline X 152865903 CCTCATGGCATTTTCGGCCCAAGGGACCCGCAGTTGGTACCCATCCTCATCGAGGCAGCCA 773317399 187657 NM_003673.3(TCAP):c.410C>T (p.Thr137Ile) TCAP Apr 21, 2015 MedGen:C1843791,OMIM:607487 Dilated cardiomyopathy 1N germline 17 39666015 GTGTGGACCGCCAGGAGGTGGCTGAGATCACAAAGCAGCTGCCCCCTGTGGTGCCTGTCAG 104894648 22895 NM_018488.3(TBX4):c.184C>T (p.Gln62Ter) TBX4 Jun 01, 2004 MedGen:C1840061,OMIM:147891,Orphanet:ORPHA1509 Ischiopatellar dysplasia germline 17 61456674 GCCGACGTCGTCGCCGCCGCCGCCGCGGAGCAGGTAGGGCTGCGCCAGCCGTCGGGTAGAA -1 469414 NM_001127221.1(CACNA1A):c.4429C>T (p.Gln1477Ter) CACNA1A Aug 07, 2017 MedGen:C4310716,OMIM:617106;MedGen:C1720416,OMIM:108500,Orphanet:ORPHA97,SNOMED CT:420932006 Epileptic encephalopathy, early infantile, 42;Episodic ataxia type 2 germline 19 13257514 AAGCATTCGGTGGACGCCACCTTTGAGAACCAGGGCCCCAGCCCCGGGTACCGCATGGAGA 121912593 17459 NM_001875.4(CPS1):c.130C>T (p.Gln44Ter) CPS1 Jan 01, 2007 MedGen:C0751753,OMIM:237300,Orphanet:ORPHA147,SNOMED CT:62522004 Congenital hyperammonemia, type I germline 2 210573301 CTAAGATTCATGCAACTGTTTCTTCAGGCACAGACAGCACACATTGTCCTGGAAGATGGAA 104894333 32876 NM_000486.5(AQP2):c.374C>T (p.Thr125Met) AQP2 Sep 01, 1998 MedGen:C4015884 Diabetes insipidus, nephrogenic, autosomal recessive germline 12 49954168 CTCTTCTCTGTCCCCAGCTCAGCAACAGCACGACGGCTGGCCAGGCGGTGACTGTGGAGCT 137852927 18425 NM_001166136.1(EVC2):c.3025C>T (p.Gln1009Ter) EVC2 Dec 01, 2002 MedGen:C0013903,OMIM:225500,Orphanet:ORPHA289,SNOMED CT:62501005 Chondroectodermal dysplasia germline 4 5576247 AGCAAGAGCCAGACATTACTGGAGCAACATCAGCAGTGGTATGCCGTGTGCCCCGTAGCAC 80338933 17521 NM_024577.3(SH3TC2):c.2860C>T (p.Arg954Ter) SH3TC2 Jul 27, 2017 MedGen:C0007959,Orphanet:ORPHA166,SNOMED CT:50548001;MedGen:C1866636,OMIM:601596,Orphanet:ORPHA99949;MedGen:C1866636,OMIM:601596,Orphanet:ORPHA99949;MedGen:CN043578;MedGen:C3150596,OMIM:613353;MedGen:C3150596,OMIM:613353;MedGen:CN239303;MedGen:CN517202 Charcot-Marie-Tooth disease;Charcot-Marie-Tooth disease, type 4C;Charcot-Marie-Tooth disease, type 4C;Charcot-Marie-Tooth disease, type IV;Mononeuropathy of the median nerve, mild;Mononeuropathy of the median nerve, mild;SH3TC2-Related Disorders;not provided biparental;germline;unknown 5 149026872 GAAATGGCATTGCTGTTTGGCTTAAGGCATCGACATCTAAAGAGTAAGTATGTCCCATGCT -1 461382 NM_000051.3(ATM):c.3673C>T (p.Gln1225Ter) ATM Jul 18, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005 Ataxia-telangiectasia syndrome germline 11 108282806 GATTATCTGGTTTTGGAATGGCTAAATCTTCAAGATACTGAATACAACTTATCTTCTTTTC 587777297 132056 NM_152305.2(POGLUT1):c.835C>T (p.Arg279Trp) POGLUT1 Jan 02, 2014 MedGen:C3810313,OMIM:615696 Dowling-degos disease 4 germline 3 119490588 TTTAATTTTCGAGGCGTAGCTGCAAGTTTCCGGTTTAAACACCTCTTCCTGTGTGGCTCAC 587778913 95212 NM_000249.3(MLH1):c.142C>T (p.Gln48Ter) MLH1 Jan 20, 2016 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:CN517202 Lynch syndrome;not provided germline 3 36996644 GCCAGTTTAGATGCAAAATCCACAAGTATTCAAGTGATTGTTAAAGAGGGAGGCCTGAAGT 1085307902 415562 NM_007294.3(BRCA1):c.376C>T (p.Gln126Ter) BRCA1 Aug 20, 2015 MedGen:CN517202 not provided germline 17 43104187 GAACATCTAAAAGATGAAGTTTCTATCATCCAAAGTATGGGCTACAGAAACCGTGCCAAAA 774005569 247581 NM_031307.3(PUS3):c.1303C>T (p.Arg435Ter) PUS3 Jul 25, 2016 MedGen:C4310745,OMIM:617051 Mental retardation, autosomal recessive 55 germline 11 125893928 TCCCGGATCCAGCATTTTGTACGTAGGGGACGAATTGAGCACCCACATTTATTCCATGAGG 74315369 27822 NM_003000.2(SDHB):c.79C>T (p.Arg27Ter) SDHB Jul 20, 2017 Human Phenotype Ontology:HP:0100723,MeSH:D046152,MedGen:C0238198,OMIM:606764,Orphanet:ORPHA44890;MedGen:C1708353,Orphanet:ORPHA29072;MedGen:C0027672,SNOMED CT:699346009;MedGen:C1861848,OMIM:115310;MedGen:C1861848,OMIM:115310;Human Phenotype Ontology:HP:0002666,MedGen:C0031511,OMIM:171300;Human Phenotype Ontology:HP:0002666,MedGen:C0031511,OMIM:171300 Gastrointestinal stroma tumor;Hereditary Paraganglioma-Pheochromocytoma Syndromes;Hereditary cancer-predisposing syndrome;Paragangliomas 4;Paragangliomas 4;Pheochromocytoma;Pheochromocytoma germline 1 17044882 TTTGTGAACTTTAAAAAATTTCAGGCCTCCCGAGGAGCCCAGACAGCTGCAGCCACAGCTC 1085307166 414093 NM_001204.6(BMPR2):c.124C>T (p.Q42*) BMPR2 - MedGen:C0152171,OMIM:178600,SNOMED CT:26174007 Primary pulmonary hypertension germline 2 202464856 CGGCTATGTGCGTTTAAAGATCCGTATCAGCAAGACCTTGGGATAGGTGAGAGTAGAATCT 267606878 16091 NM_022489.3(INF2):c.652C>T (p.Arg218Trp) INF2 Jan 01, 2010 MedGen:C2750475,OMIM:613237 Focal segmental glomerulosclerosis 5 germline 14 104703439 CCCGAGGACCTGCGCGCGCGCACCCAGCTGCGGAACGAGTTTATCGGTAAGCACCTGCCCT 886041149 264940 NM_000061.2(BTK):c.1573C>T (p.Arg525Ter) BTK Sep 29, 2016 MedGen:CN517202 not provided germline X 101354688 CACTGGTCTCTGTTTGCACTACAGGCAGCTCGAAACTGTTTGGTAAACGATCAAGGAGTTG 373075574 360002 NM_017547.3(FOXRED1):c.406C>T (p.Arg136Trp) FOXRED1 Nov 15, 2017 MedGen:C1838979,OMIM:252010;MedGen:CN517202 Mitochondrial complex I deficiency;not provided germline;inherited 11 126273068 CAGCTCTCCCTCTTTTCAGCCAGCTTTCTACGGAACATCAATGTAGGTGCAATGATATCCG -1 484616 NM_000051.3(ATM):c.6181C>T (p.Gln2061Ter) ATM Aug 11, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 11 108316096 CTCGAAACAGCAATCCCCTCATCAACACGCCAGGCAGGAATCATTCAGGTACATTTTTTCC 63750623 96458 NM_000251.2(MSH2):c.2470C>T (p.Gln824Ter) MSH2 Dec 25, 2014 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Hereditary cancer-predisposing syndrome;Lynch syndrome germline 2 47480707 TTCCCCAAATTTCTTATAGGTGTCTGTGATCAAAGTTTTGGGATTCATGTTGCAGAGCTTG 864309548 215123 NM_001271.3(CHD2):c.4921C>T (p.Gln1641Ter) CHD2 Sep 10, 2015 MedGen:C3809278,OMIM:615369 Epileptic encephalopathy, childhood-onset germline 15 93020026 CTTTCTTTTCCTGCAGATCGAGGAGACTGGCAGAGGGAAAGAAAGTTCAACTATGGTGGTG 864321629 216918 NM_004606.4(TAF1):c.3736C>T (p.Arg1246Trp) TAF1 Dec 03, 2015 MedGen:C4225418,OMIM:300966 Mental retardation, X-linked, syndromic 33 germline X 71398627 CAACATCGGGAAGAGATGCGAAAAGAACGGCGGAGGATTCAAGAGCAACTGAGGCGGCTTA 80338716 34367 NM_014251.2(SLC25A13):c.550C>T (p.Arg184Ter) SLC25A13 Jan 05, 2012 MedGen:C1853942,OMIM:605814,Orphanet:ORPHA247598 Neonatal intrahepatic cholestasis caused by citrin deficiency not provided 7 96193102 AGGACTGGGAGAGTCACAGCCATCGACTTCCGAGACATCATGGTCACCATCCGCCCCCATG 28929483 16792 NM_000251.2(MSH2):c.1865C>T (p.Pro622Leu) MSH2 Nov 14, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:C2936783,OMIM:120435 Hereditary cancer-predisposing syndrome;Lynch syndrome;Lynch syndrome I germline 2 47475130 CAAATGGAGCACCTGTTCCATATGTACGACCAGCCATTTTGGAGAAAGGACAAGGAAGAAT 104894621 23472 NM_000304.3(PMP22):c.215C>T (p.Ser72Leu) PMP22 Apr 21, 2017 MedGen:C0751036,Orphanet:ORPHA65753,SNOMED CT:398040009;MedGen:C0011195,OMIM:145900,Orphanet:ORPHA64748,SNOMED CT:111499002;MedGen:CN069174;MedGen:CN517202 Charcot-Marie-Tooth disease, type I;Dejerine-Sottas disease;Dejerine-Sottas syndrome, autosomal dominant;not provided germline 17 15239575 TGCAGTCTGTCCAGGCCACCATGATCCTGTCGATCATCTTCAGCATTCTGTCTCTGTTCCT 587777173 106766 NM_012229.4(NT5C2):c.85C>T (p.Arg29Ter) NT5C2 Jan 31, 2014 Gene:100322879,MedGen:C3888209,OMIM:613162 Spastic paraplegia 45, autosomal recessive germline 10 103174874 ATGGATAAGCATGCCCTGAAAAAGTATCGTCGAGAAGCCTATCATCGGTAAGTATTTTGTC 80358851 66685 NM_000059.3(BRCA2):c.6124C>T (p.Gln2042Ter) BRCA2 Oct 26, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline;unknown 13 32340479 GCTATACGTACTCCAGAACATTTAATATCCCAAAAAGGCTTTTCATATAATGTGGTAAATT 1057518900 360823 NM_002977.3(SCN9A):c.1642C>T (p.Arg548Ter) SCN9A Apr 21, 2015 Human Phenotype Ontology:HP:0007021,MedGen:C0344307 Pain insensitivity unknown 2 166284785 AGCATTCGTGGCTCCTTGTTTTCTGCAAGGCGAAGCAGCAGAACAAGTCTTTTTAGTTTCA 80358663 46445 NM_000059.3(BRCA2):c.4222C>T (p.Gln1408Ter) BRCA2 May 25, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline 13 32338577 GCATGTCATGGTAATACTTCAAATAAAGAACAGTTAACTGCTACTAAAACGGAGCAAAATA -1 457447 NM_000083.2(CLCN1):c.220C>T (p.Gln74Ter) CLCN1 Mar 10, 2017 MedGen:C0751360,OMIM:255700,SNOMED CT:20305008 Congenital myotonia, autosomal recessive form germline 7 143319794 CATCACAAAGAACAATTCTCAGACAGGGAGCAGGACATAGGGATGCCCAAGAAGACAGGCT 886039480 260102 NM_024675.3(PALB2):c.2368C>T (p.Gln790Ter) PALB2 May 06, 2017 MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C0015625,Orphanet:ORPHA84,SNOMED CT:30575002;MedGen:C1333600;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Familial cancer of breast;Fanconi anemia;Hereditary cancer;Hereditary cancer-predisposing syndrome;not provided germline;unknown 16 23629786 GGCAGCCCAGCAAAACCACATACCACCCTGCAAGTGTCAGGCAGGCAAGGACAACCTACCT 781764920 205718 NM_004168.3(SDHA):c.223C>T (p.Arg75Ter) SDHA Nov 02, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C3279992,OMIM:614165;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Paragangliomas 5;not provided germline 5 224432 GTGGTGGTAGGCGCTGGAGGGGCAGGCTTGCGAGCTGCATTTGGCCTTTCTGAGGCAGGGT 63750726 95433 NM_000249.3(MLH1):c.1961C>T (p.Pro654Leu) MLH1 Sep 16, 2015 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:CN517202 Lynch syndrome;not provided germline 3 37048581 ACAACTATGTGCCCCCTTTGGAGGGACTGCCTATCTTCATTCTTCGACTAGCCACTGAGGT 121918259 16913 NM_020376.3(PNPLA2):c.584C>T (p.Pro195Leu) PNPLA2 Nov 01, 2011 MedGen:C1853136,OMIM:610717,Orphanet:ORPHA98908 Neutral lipid storage disease with myopathy germline 11 822494 CCCCCTTCTCGGGCGAGAGTGACATCTGTCCGCAGGACAGCTCCACCAACATCCACGAGCT 387906875 39354 NM_004281.3(BAG3):c.367C>T (p.Arg123Ter) BAG3 May 27, 2017 MedGen:CN230736;MedGen:C3151293,OMIM:613881;EFO:EFO_0000407,Human Phenotype Ontology:HP:0001644,MedGen:C0007193,Orphanet:ORPHA217604,SNOMED CT:195021004;MedGen:CN517202 Cardiovascular phenotype;Dilated cardiomyopathy 1HH;Primary dilated cardiomyopathy;not provided germline 10 119670037 GTCTATCCCCAGCCTGGGATGCAGCGATTCCGAACTGAGGCGGCAGCAGCGGCTCCTCAGA -1 485829 NM_000044.4(AR):c.217C>T (p.Gln73Ter) AR Dec 08, 2003 MedGen:C0039585,OMIM:300068,SNOMED CT:12313004 Androgen resistance syndrome germline X 67545363 CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAGAGACTA 80358971 67007 NM_000059.3(BRCA2):c.7471C>T (p.Gln2491Ter) BRCA2 Sep 08, 2016 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome germline;somatic 13 32356463 ATTACAAGTCTTCAGAATGCCAGAGATATACAGGATATGCGAATTAAGAAGAAACAAAGGC 1057517657 359026 NM_032667.6(BSCL2):c.142C>T (p.Leu48Phe) BSCL2 Dec 08, 2016 MedGen:C1720863,OMIM:269700 Congenital generalized lipodystrophy type 2 germline 11 62705371 ATCCTCCTTTTGCTCTGGGTGTCTGTCTTCCTCTATGGCTCCTTCTACTATTCCTATATGC 397515466 76944 NM_018127.6(ELAC2):c.1267C>T (p.Leu423Phe) ELAC2 Aug 08, 2013 MedGen:C3809526,OMIM:615440,Orphanet:ORPHA369913 Combined oxidative phosphorylation deficiency 17 germline 17 13002311 AGTGTGCCCATGGTTCAGGGTGAATGCCTCCTCAAGTACCAGCTCCGTCCCAGGAGGGAGT 80356559 34245 NM_004085.3(TIMM8A):c.112C>T (p.Gln38Ter) TIMM8A Feb 06, 2003 MedGen:C0796074,OMIM:304700,Orphanet:ORPHA52368 Mohr-Tranebjaerg syndrome not provided X 101348553 CAAAAGCAGCGCTTCCAGCAGCTGGTGCACCAGATGACTGAACTTTGTTGGGTGAGGAGCC 766420907 391354 NM_001128425.1(MUTYH):c.1240C>T (p.Gln414Ter) MUTYH Sep 25, 2016 MedGen:C1837991,OMIM:608456,Orphanet:ORPHA247798 MYH-associated polyposis germline 1 45331503 TTCCCGTCCGTGACCTGGGAGCCCTCAGAGCAGCTTCAGCGCAAGGCCCTGCTGCAGGAAC 104894860 25529 NM_000202.7(IDS):c.514C>T (p.Arg172Ter) IDS Aug 14, 2017 MedGen:C0026705,OMIM:309900,SNOMED CT:70737009 Mucopolysaccharidosis, MPS-II germline X 149498301 TGTTATATTATTTTGTTTTGAAAGACATGTCGAGGGCCAGATGGAGAACTCCATGCCAACC 121918330 16157 NM_017875.3(SLC25A38):c.349C>T (p.Arg117Ter) SLC25A38 Jun 01, 2009 MedGen:C2673914,OMIM:205950,Orphanet:ORPHA255132 Anemia, sideroblastic, pyridoxine-refractory, autosomal recessive germline 3 39391513 ACTCTCTACTCTTTGAAGCAGTATTTCTTGCGAGGCCATCCCCCAACCGCCCTGGAGTCAG 1057520053 363661 NM_001197104.1(KMT2A):c.11230C>T (p.Arg3744Ter) KMT2A Dec 06, 2016 MedGen:CN517202 not provided de novo;germline 11 118519701 ATTGAGCAGCTGTCTGGTGCCAAGCACTGTCGAAATTACAAATTCCGTTTCCACAAGCCAG 80358807 66607 NM_000059.3(BRCA2):c.5791C>T (p.Gln1931Ter) BRCA2 Sep 08, 2016 MedGen:C2675520,OMIM:612555;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 2;Hereditary cancer-predisposing syndrome germline 13 32340146 TTTGCTGACATTCAGAGTGAAGAAATTTTACAACATAACCAAAATATGTCTGGATTGGAGA 121909012 22180 NM_000492.3(CFTR):c.2551C>T (p.Arg851Ter) CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline;unknown 7 117594990 CCAGCAGTGACTACATGGAACACATACCTTCGATATATTACTGTCCACAAGAGCTTAATTT 796052728 201918 NM_002397.4(MEF2C):c.43C>T (p.Arg15Cys) MEF2C Jan 03, 2017 MedGen:CN517202 not provided germline 5 88823746 AAGATTCAGATTACGAGGATTATGGATGAACGTAACAGACAGGTGAGTGGAGTAAACTTTT 886052321 344037 NM_021615.4(CHST6):c.892C>T (p.Gln298Ter) CHST6 Jun 14, 2016 MedGen:C1636149,OMIM:217800,Orphanet:ORPHA98969,SNOMED CT:418054005 Macular corneal dystrophy Type I germline 16 75478937 TACGCCTTCACTGGGCTCAGTCTCACGCCACAGCTCGAGGCCTGGATCCATAACATCACCC 1060502761 401133 NM_024675.3(PALB2):c.1435C>T (p.Gln479Ter) PALB2 Oct 11, 2016 MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006 Familial cancer of breast germline 16 23635111 TGCACAGGACAACCAAGTTCAAGAACCTCTCAGAAACTTCTCTCATTAACTAAAGTCAGCT 371214841 440178 NM_001080463.1(DYNC2H1):c.7966C>T (p.Arg2656Cys) DYNC2H1 Jun 01, 2017 MedGen:CN674505 Short-rib polydactyly syndrome type III maternal 11 103199354 TTCCCTGGAGGTTCACTTCTATTAGCAGGACGCAGTGGTGTAGGTCGTCGGACCATCACTT 928945364 486874 NM_001271208.1(NEB):c.11164C>T (p.Arg3722Ter) NEB Sep 09, 2016 MedGen:C0206157,Orphanet:ORPHA607,SNOMED CT:75072002 Nemaline myopathy germline 2 151617381 ACACCAGAAATCATGTTAGCCAAACTCAACCGAATAAACTACAGTGATGTAAGTAAACTGT 398123373 98863 NM_000426.3(LAMA2):c.3976C>T (p.Arg1326Ter) LAMA2 Jul 03, 2017 MedGen:C1263858,OMIM:607855,Orphanet:ORPHA258,SNOMED CT:111503008;MedGen:CN517202 Merosin deficient congenital muscular dystrophy;not provided germline 6 129316089 GATGATCCTCGAGTCCATAGAACTGTGACCCGAGAAGACTTCTTGGATATACTATATGATA -1 441805 NM_000296.3(PKD1):c.12028C>T (p.Gln4010Ter) PKD1 Oct 21, 2016 MedGen:CN517202 not provided germline 16 2090781 CAGGCTGCCCAGCAGCTACGCTTCGTGCGCCAGTGGTCCGTCTTTGGCAAGACATTATGCC 1057517700 359330 NM_000350.2(ABCA4):c.1834C>T (p.Gln612Ter) ABCA4 Jul 20, 2015 MedGen:CN517202 not provided germline 1 94062680 CGGTACATCTGGGGCGGGTTTGCCTATCTGCAGGACATGGTTGAACAGGGGATCACAAGGA 104894159 31789 NM_000399.4(EGR2):c.1225C>T (p.Arg409Trp) EGR2 Oct 18, 2012 MedGen:C1843247,OMIM:607678,Orphanet:ORPHA101084 Charcot-Marie-Tooth disease, demyelinating, type 1d germline 10 62813413 GCCTGTGACTACTGTGGCCGAAAGTTTGCCCGGAGTGATGAGAGGAAGCGCCACACCAAGA 77103971 76972 NM_006397.2(RNASEH2A):c.556C>T (p.Arg186Trp) RNASEH2A Mar 13, 2014 MedGen:C1835912,OMIM:610333 Aicardi Goutieres syndrome 4 germline 19 12810323 TCCAGGTGCCTGTTTTGCCCACAGGTGGCCCGGGACCAGGCCGTGAAGAAATGGCAGTTCG 119485089 20070 NM_022041.3(GAN):c.1447C>T (p.Gln483Ter) GAN Nov 01, 2000 MedGen:C1850386,OMIM:256850,Orphanet:ORPHA643,SNOMED CT:128207002 Giant axonal neuropathy germline 16 81365423 TTTGGGGGAGTCCGAAGTCGTGAGGACGCCCAGGGTAGCGAGATGGTAACTTGCAAGTCCG 119473038 19215 NM_014140.3(SMARCAL1):c.1756C>T (p.Arg586Trp) SMARCAL1 Jan 01, 2009 MedGen:C0877024,OMIM:242900,Orphanet:ORPHA1830 Schimke immunoosseous dysplasia germline 2 216447063 ATCCTGTTGTCGGGCACACCAGCCATGTCCCGGCCCGCAGAGCTCTACACGCAGATCATCG 28939085 19911 NM_000197.1(HSD17B3):c.695C>T (p.Ser232Leu) HSD17B3 May 01, 1994 MedGen:C0268296,OMIM:264300,Orphanet:ORPHA752,SNOMED CT:50658006 Testosterone 17-beta-dehydrogenase deficiency germline 9 96240885 CGTTGTAGGTGCTGACCCCATATGCTGTCTCGACTGCAATGACAAAGTATCTAAATACAAA 104894149 16833 NM_000102.3(CYP17A1):c.1039C>T (p.Arg347Cys) CYP17A1 Dec 01, 2002 MedGen:C3277851 Combined partial 17-alpha-hydroxylase/17,20-lyase deficiency germline 10 102832611 GGTTTCAGCCGCACACCAACTATCAGTGACCGTAACCGTCTCCTCCTGCTGGAGGCCACCA 138671904 482113 NM_003119.3(SPG7):c.1369C>T (p.Arg457Ter) SPG7 Aug 16, 2017 MedGen:CN517202 not provided germline 16 89544692 GACCATGTCATCGTCCTGGCGTCCACGAACCGAGCTGACATTTTGGACGGTGCTCTGATGA 876659539 233080 NM_000038.5(APC):c.3211C>T (p.Gln1071Ter) APC Aug 22, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 5 112838805 AAACAAAGTGAGCAAAGACAATCAAGGAATCAAAGTACAACTTATCCTGTTTATACTGAGA 376823689 214419 NM_004366.5(CLCN2):c.2386C>T (p.Gln796Ter) CLCN2 Sep 09, 2015 MedGen:C3810242,OMIM:615651,Orphanet:ORPHA363540 Leukoencephalopathy with ataxia germline 3 184352042 AGTGACTGCAAAATTGATCCTGCTCCCTTCCAGCTGGTGGAGCGGACCTCTTTGCACAAGG 869025314 223697 NM_173471.3(SLC25A26):c.305C>T (p.Ala102Val) SLC25A26 Oct 20, 2017 MedGen:C4225206,OMIM:616794,Orphanet:ORPHA466784 Combined oxidative phosphorylation deficiency 28 germline 3 66262055 AGGATATAATCAAATTTGTCTTTTAGGTTGCCTGCCTGATTCGAGTTCCATCTGAAGTGGT 746709222 205750 NM_018238.3(AGK):c.409C>T (p.Arg137Ter) AGK Sep 18, 2017 MedGen:C1859317,OMIM:212350,Orphanet:ORPHA1369;MedGen:CN517202 Cataract and cardiomyopathy;not provided germline;paternal 7 141614164 TTACATTTGTAGGTTGTTACTGGTGTTCTTCGACGAACAGATGAGGTGAGCATTAAAGAGT 28940872 18868 NM_000017.3(ACADS):c.1147C>T (p.Arg383Cys) ACADS Aug 14, 2017 MedGen:C0342783,OMIM:201470,Orphanet:ORPHA26792,SNOMED CT:124166007;MedGen:CN517202 Deficiency of butyryl-CoA dehydrogenase;not provided germline;unknown 12 120739356 GTGACAGAGATGCCGGCAGAGCGGCACTACCGCGACGCCCGCATCACTGAGATCTACGAGG 1057524391 375131 NM_152641.3(ARID2):c.2872C>T (p.Gln958Ter) ARID2 Jan 13, 2017 MedGen:CN517202 not provided germline 12 45850995 CTTGCTAATCCAGCAGCTCTTCCAGCTGGTCAGACAGTTCAGCTAACTGGACAACCTAACA -1 442146 NM_000435.2(NOTCH3):c.1261C>T (p.Arg421Cys) NOTCH3 Aug 27, 2014 MedGen:CN517202 not provided germline 19 15189106 ACGCAGGGCTCCTTCCTGTGCCAGTGCGGTCGTGGCTACACTGGACCTCGCTGTGAGACCG 180177182 200451 NM_000030.2(AGXT):c.205C>T (p.Gln69Ter) AGXT Nov 27, 2014 MedGen:C0268164,OMIM:259900,Orphanet:ORPHA93598,SNOMED CT:65520001 Primary hyperoxaluria, type I germline 2 240869209 GAGATCAAGGAAGGCATCCAGTACGTGTTCCAGACCAGGAACCCACTCACACTGGTCATCT 768831533 424477 NM_025145.6(CFAP43):c.4132C>T (p.Arg1378Ter) CFAP43 Jul 25, 2017 MedGen:CN349872,OMIM:617592 SPERMATOGENIC FAILURE 19 germline 10 104143452 TTGGTCTGGAATCATTTCTGCATGACAAGACGAGCAAAAGTGGAAAATGAACAGAAAGTAT 794728165 197808 NM_000138.4(FBN1):c.1090C>T (p.Arg364Ter) FBN1 Aug 17, 2017 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:CN517202 Marfan syndrome;not provided germline 15 48520716 ACCAAAATGCAGTGCTGCTGTGATGCCGGCCGATGCTGGTCTCCAGGGGTCACTGTCGCCC 587778992 95568 NM_000249.3(MLH1):c.2224C>T (p.Gln742Ter) MLH1 Jan 13, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Hereditary cancer-predisposing syndrome;Lynch syndrome germline 3 37050606 AAACATTTCACAGAAGATGGAAATATCCTGCAGCTTGCTAACCTGCCTGATCTATACAAAG 121913281 48304 NM_006218.3(PIK3CA):c.3139C>T (p.His1047Tyr) PIK3CA May 31, 2016 Human Phenotype Ontology:HP:0030078,MeSH:C538231,MedGen:C0152013;MedGen:C0007112;MedGen:C0278701;Human Phenotype Ontology:HP:0006744,MeSH:D018268,MedGen:C0206686,Orphanet:ORPHA1501;Human Phenotype Ontology:HP:0010796,MedGen:C0677865;Human Phenotype Ontology:HP:0011459,MedGen:C0152018,Orphanet:ORPHA70482;MeSH:D015179,MedGen:CN236642;Human Phenotype Ontology:HP:0100843,MeSH:D005909,MedGen:C0017636,SNOMED CT:63634009;MedGen:C2239176,OMIM:114550,Orphanet:ORPHA88673,SNOMED CT:187769009,SNOMED CT:25370001;MeSH:C562393,MedGen:C0151779,SNOMED CT:93655004;MedGen:C0153574,Orphanet:ORPHA213569;MedGen:C0153368;Human Phenotype Ontology:HP:0002885,MeSH:D008527,MedGen:C0025149,OMIM:155255,Orphanet:ORPHA616;MedGen:C1865285,OMIM:602501;Human Phenotype Ontology:HP:0030692,MeSH:D001932,MedGen:C0006118,SNOMED CT:126952004;Human Phenotype Ontology:HP:0100013,MeSH:D001943,MedGen:C1458155,Orphanet:ORPHA180250,SNOMED CT:126926005;Human Phenotype Ontology:HP:0030358,MeSH:D002289,MedGen:C0007131,SNOMED CT:254637007;MedGen:C0279663;Human Phenotype Ontology:HP:0006725,MedGen:C0281361;Human Phenotype Ontology:HP:0005584,MeSH:D002292,MedGen:C0007134,OMIM:605074,Orphanet:ORPHA217071,SNOMED CT:41607009;Human Phenotype Ontology:HP:0030359,MedGen:C0149782;MeSH:C535575,MedGen:C1168401,OMIM:275355,Orphanet:ORPHA67037;Human Phenotype Ontology:HP:0006740,MedGen:C0279680;MedGen:C0280630;MeSH:D002583,MedGen:CN236667 Adenocarcinoma of lung;Adenocarcinoma of prostate;Adenocarcinoma of stomach;Adrenocortical carcinoma;Brainstem glioma;Carcinoma of esophagus;Colorectal Neoplasms;Glioblastoma;Hepatocellular carcinoma;Malignant melanoma of skin;Malignant neoplasm of body of uterus;Malignant tumor of floor of mouth;Medulloblastoma;Megalencephaly cutis marmorata telangiectatica congenita;Neoplasm of brain;Neoplasm of the breast;Non-small cell lung cancer;Ovarian Serous Cystadenocarcinoma;Pancreatic adenocarcinoma;Renal cell carcinoma, papillary, 1;Squamous cell carcinoma of lung;Squamous cell carcinoma of the head and neck;Transitional cell carcinoma of the bladder;Uterine Carcinosarcoma;Uterine cervical neoplasms somatic 3 179234296 GAGTATTTCATGAAACAAATGAATGATGCACATCATGGTGGCTGGACAACAAAAATGGATT 119468010 18665 NM_000250.1(MPO):c.1705C>T (p.Arg569Trp) MPO Aug 18, 2016 MedGen:C0398595,OMIM:254600,Orphanet:ORPHA2587,SNOMED CT:129644003,SNOMED CT:234433009;MedGen:CN517202 Myeloperoxidase deficiency;not provided germline;paternal 17 58272835 CGTCAGAACCAAATTGCAGTGGATGAGATCCGGGAGCGATTGTTTGAGCAGGTCATGAGGA 1057520585 365204 NM_006015.4(ARID1A):c.1390C>T (p.Gln464Ter) ARID1A Apr 03, 2015 MedGen:CN517202 not provided germline 1 26731191 TATGGACAACAAGGCCCCAGCGGGTATGGTCAACAGGGCCAGACTCCATATTACAACCAGC 121908316 19652 NM_032383.4(HPS3):c.1189C>T (p.Arg397Trp) HPS3 Oct 11, 2012 MedGen:C3888001,OMIM:614072 Hermansky-Pudlak syndrome 3 germline 3 149150624 CTCAGTAACAACCTGCAGTGTTTCACTGTGCGGTGCAGTGCGGCGGCAGCTCGTGAGGAGG 368260932 45639 NM_001277115.1(DNAH11):c.8698C>T (p.Arg2900Ter) DNAH11 Dec 16, 2015 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244;MedGen:C2678473,OMIM:611884 Ciliary dyskinesia;Ciliary dyskinesia, primary, 7 germline 7 21749702 TTACAGGTAGATCTTGCCAATTTGTACATCCGAACTGGAGCCAAGAACATGCCCACTGTGT 886042045 264322 NM_000093.4(COL5A1):c.3397C>T (p.Arg1133Ter) COL5A1 Oct 14, 2016 MedGen:CN517202 not provided germline 9 134809213 GGCGAGAAAGGCCCACAAGGCCCAGCTGGCCGAGACGGTCTCCAGGGGCCTGTGGGGCTCC 398123708 100051 NM_003482.3(KMT2D):c.11692C>T (p.Gln3898Ter) KMT2D Jul 30, 2013 MedGen:CN030661,OMIM:147920 Kabuki syndrome 1 germline 12 49033013 AAACTGAGCGCTCAGCCCATGGGCTCTTTACAGCAGCTTCAGCAGCAGCAGCAGCTGCAAC 121434594 28997 NM_002880.3(RAF1):c.781C>T (p.Pro261Ser) RAF1 Oct 06, 2017 MeSH:D009634,MedGen:C0028326,Orphanet:ORPHA648,SNOMED CT:205824006;MedGen:C1969057,OMIM:611553;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN166718,Orphanet:ORPHA98733;MedGen:CN517202 Noonan syndrome;Noonan syndrome 5;Primary familial hypertrophic cardiomyopathy;Rasopathy;not provided germline;somatic 3 12604189 CTCTCCCAGAGGCAGAGGTCGACATCCACACCTAATGTCCACATGGTCAGCACCACCCTGC 369879957 200154 NM_000048.3(ASL):c.649C>T (p.Arg217Ter) ASL Sep 29, 2016 MedGen:CN517202 not provided germline 7 66087380 AATCCCCTGGGTGTGGACCGAGAGCTGCTCCGAGCAGGTGAGACGTCCTGCCCCTCCTCCC 748653573 227079 NM_001904.3(CTNNB1):c.2128C>T (p.Arg710Cys) CTNNB1 Aug 15, 2017 MedGen:CN321863,OMIM:617572;MedGen:C1851402,OMIM:133780 EXUDATIVE VITREORETINOPATHY 7;Exudative vitreoretinopathy 1 germline 3 41238067 ATTGGTGCCCAGGGAGAACCCCTTGGATATCGCCAGGATGGTATGTGTCTCATATTTCTCG 886038075 248937 NM_000059.3(BRCA2):c.2548C>T (p.Gln850Ter) BRCA2 Sep 08, 2016 MedGen:C2675520,OMIM:612555 Breast-ovarian cancer, familial 2 germline 13 32336903 ATGAGAGTAGCATCACCTTCAAGAAAGGTACAATTCAACCAAAACACAAATCTAAGAGTAA 202193201 15077 NM_001201543.1(FAM161A):c.1567C>T (p.Arg523Ter) FAM161A Oct 18, 2016 MedGen:C1853734,OMIM:606068 Retinitis pigmentosa 28 germline;unknown 2 61839437 CCTCCCGTGCCCACGGTATCTTCCAGAGGACGAGAACAAGCCGTAAGGTAAGTAAGTAGGA 72554645 209250 NM_000052.6(ATP7A):c.2383C>T (p.Arg795Ter) ATP7A Nov 20, 2017 MedGen:C0022716,OMIM:309400,Orphanet:ORPHA565,SNOMED CT:59178007;MedGen:CN517202 Menkes kinky-hair syndrome;not provided germline X 78013089 CCTATGCTGTTTGTGTTTATTGCACTAGGCCGATGGCTGGAACATATAGCAAAGGTAAAGT -1 479651 NM_058216.2(RAD51C):c.277C>T (p.Gln93Ter) RAD51C Jan 06, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 17 58695062 AAGAAGTGTACAGCACTGGAACTTCTTGAGCAGGAGCATACCCAGGGCTTCATAATCACCT 587776977 59815 NM_001242896.1(DEPDC5):c.982C>T (p.Arg328Ter) DEPDC5 Apr 13, 2016 Gene:50987,MedGen:C1858477,OMIM:604364 Epilepsy, familial focal, with variable foci 1 germline 22 31802739 GATAAGCACTACATCAACCGCAACTTTGACCGAACTGGGCAGATGTCAGTGGTGATCACGC 1131692216 424330 NM_000527.4(LDLR):c.1744C>T (p.Leu582Phe) LDLR Mar 30, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline;not applicable 19 11116897 AGTGGCCGCCTCTACTGGGTTGACTCCAAACTTCACTCCATCTCAAGCATCGATGTCAACG 67418243 103043 NM_000531.5(OTC):c.274C>T (p.Arg92Ter) OTC - MedGen:CN517202 not provided unknown X 38369853 TTAGGCATGATTTTTGAGAAAAGAAGTACTCGAACAAGATTGTCTACAGAAACAGGTAAGT 193919340 19014 NM_015120.4(ALMS1):c.8164C>T (p.Arg2722Ter) ALMS1 Oct 01, 2007 MedGen:C0268425,OMIM:203800,Orphanet:ORPHA64,SNOMED CT:63702009 Alstrom syndrome germline 2 73490120 TTTACTACCTCCATCACTTTTTCATCTCACCGACATTCTAAATGCATTTCCAATTCCTCTG 387906668 38784 NM_001111035.2(ACP5):c.266C>T (p.Thr89Ile) ACP5 Feb 01, 2011 MedGen:C1842763,OMIM:607944 Spondyloenchondrodysplasia with immune dysregulation germline 19 11576839 AGGCCTGCCCTATCTGTTTGCTACAGGAGACCTTTGAGGACGTATTCTCTGACCGCTCCCT 121918386 32926 NM_000384.2(APOB):c.6253C>T (p.Arg2085Ter) APOB Jun 15, 1989 MedGen:C1862596,Orphanet:ORPHA426,SNOMED CT:60193003 Familial hypobetalipoproteinemia germline 2 21010615 GAGACCTTGCAAGAATATTTTGAGAGGAATCGACAAACCATTATAGTTGTACTGGAAAACG 113993973 34189 NM_002863.4(PYGL):c.280C>T (p.Arg94Ter) PYGL May 17, 2011 MedGen:C0017925,OMIM:232700,Orphanet:ORPHA369,SNOMED CT:237971004,SNOMED CT:29291001 Glycogen storage disease, type VI not provided 14 50937801 TATTACCTCTCTCTGGAATTTTACATGGGCCGAACATTACAGAACACCATGATCAACCTCG 267608663 153540 NM_003159.2(CDKL5):c.2593C>T (p.Gln865Ter) CDKL5 Mar 13, 2014 MedGen:C1839333,OMIM:300672 Early infantile epileptic encephalopathy 2 de novo;germline X 18628467 TCAGATCCCCGCTTCCAGCCCTTAACAGCTCAACAAACCAAAAATTCCTTCTCAGAAATTC 181860632 202934 NM_002693.2(POLG):c.3139C>T (p.Arg1047Trp) POLG Oct 09, 2017 MedGen:CN517202 not provided germline 15 89319065 CAGTGGAAGAAGTGGGAGGTGGTTGCTGAACGGGCATGGAAGGGGGGCACAGAGTCAGAAA 587783695 168909 NM_003482.3(KMT2D):c.15061C>T (p.Arg5021Ter) KMT2D Jan 02, 2014 MedGen:CN030661,OMIM:147920 Kabuki syndrome 1 germline 12 49026905 GAGTTTATGGAGCAGCTTGGCACAGCCTTGCGACCTGACAAGGTACCGCGAGACATGCGTC 587777198 106832 NM_006612.5(KIF1C):c.505C>T (p.Arg169Trp) KIF1C Mar 06, 2014 MedGen:C1969796,OMIM:611302,Orphanet:ORPHA397946 Ataxia, spastic, 2, autosomal recessive germline 17 5002539 AACCCCAAGAGTCGGGGTTCTCTGCGGGTCCGGGAGCACCCCATCCTGGGCCCGTACGTGC 121912869 32399 NM_001844.4(COL2A1):c.625C>T (p.Arg209Ter) COL2A1 Nov 09, 2017 MedGen:C2020284,OMIM:108300;MedGen:CN517202 Stickler syndrome type 1;not provided germline 12 47995904 TCTGTTCCGATGCAGGGCCCCATGGGACCTCGAGGACCTCCAGGCCCTGCAGGTGCTCCTG 587783685 168920 NM_003482.3(KMT2D):c.12592C>T (p.Arg4198Ter) KMT2D Aug 22, 2013 MedGen:CN030661,OMIM:147920 Kabuki syndrome 1 germline 12 49032113 GTTGGAATCATGCCTACGGTGGGTCAGCTTCGAGCACAGCTCCAAGGAGTCCTGGCCAAAA 376788209 424479 NM_025145.6(CFAP43):c.253C>T (p.Arg85Trp) CFAP43 Jul 25, 2017 MedGen:CN349872,OMIM:617592 SPERMATOGENIC FAILURE 19 germline 10 104230656 ATCCCCTGTGAAGTTGTGGCTTTTTCTGACCGGAAGCTAAAACCTCTCATCTACGTATACA -1 428130 NM_032638.4(GATA2):c.1084C>T (p.Arg362Ter) GATA2 Sep 24, 2015 MedGen:CN118027 Leukemia, acute myeloid, susceptibility to germline 3 128481878 TGTCAGACGACAACCACCACCTTATGGCGCCGAAACGCCAACGGGGACCCTGTCTGCAACG 773740590 481337 NM_020732.3(ARID1B):c.4009C>T (p.Arg1337Ter) ARID1B Sep 08, 2017 MedGen:CN029606,OMIM:135900;MedGen:CN517202 Coffin-Siris syndrome 1;not provided de novo;germline 6 157196311 CAGCAGTTTCCCTATGGAGCCAGTTACGACCGAAGGTGAGTATTTTTTAAGATGACAATAT 727503912 177085 NM_003494.3(DYSF):c.5266C>T (p.Gln1756Ter) DYSF Feb 20, 2017 MedGen:C1850889,OMIM:253601,Orphanet:ORPHA268;MedGen:C1850808,OMIM:254130,Orphanet:ORPHA45448;MedGen:CN517202 Limb-girdle muscular dystrophy, type 2B;Miyoshi muscular dystrophy 1;not provided germline 2 71667441 GTGGAGGAGCGTCTGGCTCTGCATGTGCTTCAGCAGCAGGGCCTGGTCCCGGAGCACGTGG 121913303 132350 NM_000321.2(RB1):c.1654C>T (p.Arg552Ter) RB1 Sep 15, 2017 MedGen:C0027672,SNOMED CT:699346009;Human Phenotype Ontology:HP:0009919,MeSH:D012175,MedGen:C0035335,OMIM:180200,Orphanet:ORPHA790 Hereditary cancer-predisposing syndrome;Retinoblastoma germline;somatic 13 48381402 TTGACAAGAGAAATGATAAAACATTTAGAACGATGTGAACATCGAATCATGGAATCCCTTG 587783478 169267 NM_004380.2(CREBBP):c.316C>T (p.Gln106Ter) CREBBP Jun 27, 2013 MedGen:C0035934,OMIM:180849,Orphanet:ORPHA353277,SNOMED CT:45582004 Rubinstein-Taybi syndrome germline 16 3850779 CAGCAGGGCCTGGGTGGCCAGGCTCAAGGGCAGCCGAACAGTGCTAACATGGCCAGCCTCA 34667348 28657 NM_000293.2(PHKB):c.1969C>T (p.Gln657Ter) PHKB Jun 14, 2016 MedGen:C0268147,Orphanet:ORPHA370,SNOMED CT:235908005;MedGen:C0543514,OMIM:261750,Orphanet:ORPHA79240 Glycogen phosphorylase kinase deficiency;Glycogen storage disease IXb germline 16 47650919 GGAGGAGTCAAAGTTCATGTGGATCGTCTACAGGTAGCCTTCTGATTTTCAGTATGCATCT 104894608 21733 NM_005450.4(NOG):c.668C>T (p.Pro223Leu) NOG Mar 01, 1999 Human Phenotype Ontology:HP:0100264,MedGen:C1861385,OMIM:185800,Orphanet:ORPHA3250 Cushing's symphalangism germline 17 56594891 AGCGCTGCGGCTGGATTCCCATCCAGTACCCCATCATTTCCGAGTGCAAGTGCTCGTGCTA 587779350 132700 NM_001111283.2(IGF1):c.292C>T (p.Arg98Trp) IGF1 - MedGen:C1837475,OMIM:608747,Orphanet:ORPHA73272 Insulin-like growth factor I deficiency germline 12 102419619 CAGACAGGCATCGTGGATGAGTGCTGCTTCCGGAGCTGTGATCTAAGGAGGCTGGAGATGT 863225362 214662 NM_000038.5(APC):c.487C>T (p.Gln163Ter) APC Jul 18, 2017 MedGen:CN240755;MedGen:C2713442,OMIM:175100;MedGen:CN517202 Familial adenomatous polyposis;Familial adenomatous polyposis 1;not provided germline;unknown 5 112775693 AAGGAAAAAGACTGGTATTACGCTCAACTTCAGAATCTCACTAAAAGAATAGATAGTCTTC 74315432 20286 NM_014588.5(VSX1):c.496C>T (p.Arg166Trp) VSX1 May 01, 2002 MedGen:C1835677,OMIM:148300 Keratoconus 1 germline 20 25079443 TCCCCCACCTTGGGCAAGAGGAAGAAGCGGCGGCACAGGTATAGGGCCAGGCAGTCCCCTC -1 472522 NM_000465.3(BARD1):c.1744C>T (p.Gln582Ter) BARD1 Feb 29, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 2 214745788 CTTATAGGCAGTGGGCTGTCTTCAGAACAACAGAAAATGCTCAGTGAGCTTGCAGTAATTC 587784286 169373 NM_000430.3(PAFAH1B1):c.730C>T (p.Gln244Ter) PAFAH1B1 Feb 08, 2013 MedGen:C1843916,OMIM:607432 Lissencephaly 1 germline 17 2674118 AGAGAATGGGTACGTATGGTACGGCCAAATCAAGATGGCACTCTGATAGCCAGCTGTTCCA 60580541 29552 NM_170707.3(LMNA):c.1586C>T (p.Ala529Val) LMNA Sep 01, 2005 MedGen:C0432291,OMIM:248370,Orphanet:ORPHA2457,SNOMED CT:109419009;MedGen:CN517202 Mandibuloacral dysostosis;not provided germline 1 156137210 CCTGGGGCTGCGGGAACAGCCTGCGTACGGCTCTCATCAACTCCACTGGGGAAGTAAGTAG 121434256 18349 NM_000383.3(AIRE):c.415C>T (p.Arg139Ter) AIRE Nov 30, 2016 MedGen:C0085859,OMIM:240300,Orphanet:ORPHA3453,SNOMED CT:11244009;MedGen:CN517202 Polyglandular autoimmune syndrome, type 1;not provided germline;unknown 21 44287085 CCCACCAAGAGGAAGGCCTCAGAAGAGGCTCGAGCTGCCGCGCCAGCAGCCCTGACTCCAA 786204536 186985 NM_000018.3(ACADVL):c.685C>T (p.Arg229Ter) ACADVL Feb 02, 2016 MedGen:C3887523,OMIM:201475,Orphanet:ORPHA26793,SNOMED CT:237996001,SNOMED CT:237997005;MedGen:CN517202 Very long chain acyl-CoA dehydrogenase deficiency;not provided germline;unknown 17 7222014 CCCTCAAGCGGGTCAGATGCAGCCTCCATCCGAACCTCTGCTGTGCCCAGCCCCTGTGGAA 281865118 20552 NM_014363.5(SACS):c.7504C>T (p.Arg2502Ter) SACS Sep 03, 2015 MedGen:C1849140,OMIM:270550,Orphanet:ORPHA98 Spastic ataxia Charlevoix-Saguenay type germline;unknown 13 23336372 GTAGCAGTAAAACTAGGAGCAGTCCCAAAGCGACACAAAGCCTTAGAAAGATATGCATCCA 61751296 15338 NM_000552.4(VWF):c.7603C>T (p.Arg2535Ter) VWF Jun 26, 2016 MedGen:CN517202;MedGen:C1264041,Orphanet:ORPHA166096,SNOMED CT:128108002 not provided;von Willebrand disease type 3 germline 12 5969337 GAGAACCCCTGCCTCATCAATGAGTGTGTCCGAGTGAAGGAGGAGGTCTTTATACAACAAA 749066913 31908 NM_000031.5(ALAD):c.165-11C>T ALAD Jan 01, 2004 MedGen:C0268328,OMIM:612740,Orphanet:ORPHA95157,SNOMED CT:64081000 Porphobilinogen synthase deficiency germline 9 113391634 GGACCTGCCTTCCTTCAACCCCTCTACCCACACCCACACAGGTATGGTGTGAAGCGGCTGG 63749795 95218 NM_000249.3(MLH1):c.1459C>T (p.Arg487Ter) MLH1 Jun 07, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0009405,Orphanet:ORPHA443090;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Hereditary nonpolyposis colon cancer;Lynch syndrome;not provided germline;unknown 3 37028833 TCTGATGTGGAAATGGTGGAAGATGATTCCCGAAAGGAAATGACTGCAGCTTGTACCCCCC -1 439324 NM_130838.2(UBE3A):c.1444C>T (p.Arg482Ter) UBE3A Sep 06, 2017 MedGen:CN517202 not provided germline 15 25370670 TATGACAATAGAATTCGCATGTACAGTGAACGAAGAATCACTGTTCTCTACAGCTTAGTTC 35878526 46992 NM_024312.4(GNPTAB):c.832C>T (p.Gln278Ter) GNPTAB May 10, 2012 MedGen:C0086647,OMIM:252900,Orphanet:ORPHA79269,SNOMED CT:41572006 Mucopolysaccharidosis, MPS-III-A not provided 12 101771097 CTTCTAAAACTGAATAACCCCAAGGATTTTCAAGAATTGAATAAGCAAACTAAGAAGAACA 886039429 259674 NM_005595.4(NFIA):c.361C>T (p.Arg121Cys) NFIA Mar 20, 2017 MedGen:CN517202 not provided germline 1 61088482 AAAGGCAAGATGCGAAGAATTGACTGCCTCCGCCAGGCAGATAAAGTCTGGAGGTTGGACC 587783268 167720 NM_018136.4(ASPM):c.7612C>T (p.Gln2538Ter) ASPM Feb 08, 2013 MedGen:C1837501,OMIM:608716 Primary autosomal recessive microcephaly 5 germline 1 197101639 ATCAGACAATGGCATTCTGCTGTGGTTATTCAGGCTGCATATAAAGGAATGAAAGCAAGAC 28933383 33979 NM_000217.2(KCNA1):c.677C>T (p.Thr226Met) KCNA1 Aug 16, 2012 MedGen:C1719788,OMIM:160120,Orphanet:ORPHA37612,SNOMED CT:421182009 Episodic ataxia type 1 not provided 12 4912055 TCTTCACAGACCCCTTCTTCATCGTGGAAACGCTGTGTATCATCTGGTTCTCCTTCGAGCT 143441644 187092 NM_016035.4(COQ4):c.718C>T (p.Arg240Cys) COQ4 Oct 19, 2017 MedGen:C4225392,OMIM:616276,Orphanet:ORPHA457185;MedGen:CN517202 Coenzyme Q10 deficiency, primary, 7;not provided germline;maternal 9 128333565 CCATGTGTCCTCAACCTGTACTATGAGCGGCGCTGGGAGCAGTCCCTGAGGGCTCTGCGGG 1057519338 362081 NM_015365.2(AMMECR1):c.502C>T (p.Arg168Ter) AMMECR1 Jan 25, 2018 MedGen:C4310810,OMIM:300990 Midface hypoplasia, hearing impairment, elliptocytosis, and nephrocalcinosis germline;maternal X 110264571 AGCCCACTGTTTGTAACATGGAAGATTGGTCGAGACAAAAGATTACGTGGATGCATAGGTA 121965085 26899 NM_000260.3(MYO7A):c.1996C>T (p.Arg666Ter) MYO7A Jan 15, 2014 MedGen:C1568247,OMIM:276900,Orphanet:ORPHA231169;MedGen:C1848638 Usher syndrome, type 1;Usher syndrome, type 1B germline 11 77174816 CTGCGGTACTCAGGAATGATGGAGACCATCCGAATCCGCCGAGCTGGCTACCCCATCCGCT 267607046 15229 NM_001017995.2(SH3PXD2B):c.127C>T (p.Arg43Trp) SH3PXD2B Feb 12, 2010 MedGen:C1855305,OMIM:249420,Orphanet:ORPHA137834 Frank Ter Haar syndrome germline 5 172422445 TGGTCCAGCGGCTCCACCGAGGCCATTTACCGGCGCTACAGCAAGTTTTTTGACCTCCAGG 794728381 197234 NM_000238.3(KCNH2):c.2026C>T (p.Gln676Ter) KCNH2 Feb 02, 2014 MedGen:CN517202 not provided germline 7 150951040 CTGTACTCGGGCACAGCCCGCTACCACACACAGATGCTGCGGGTGCGGGAGTTCATCCGCT 796053248 201157 NM_006516.2(SLC2A1):c.667C>T (p.Arg223Trp) SLC2A1 Aug 11, 2017 MedGen:C3149117;MedGen:CN517202 GLUT1 deficiency syndrome 1, autosomal recessive;not provided germline 1 42929885 TTCCTGCTCATCAACCGCAACGAGGAGAACCGGGCCAAGAGTGGTACGGGCATGGCCCTGC 562139820 397593 NM_001080463.1(DYNC2H1):c.10606C>T (p.Arg3536Ter) DYNC2H1 Jun 01, 2017 MedGen:C0265275,Orphanet:ORPHA474,SNOMED CT:75049004;MedGen:CN674505 Jeune thoracic dystrophy;Short-rib polydactyly syndrome type III germline;unknown 11 103257731 AGTTTGGCTGCTTTTCTCCGACTTTTCCAACGAGCTCTACAAAACAAACAGGTAAGCTGTT 1064793890 406930 NM_004415.3(DSP):c.8014C>T (p.Gln2672Ter) DSP Jul 13, 2015 MedGen:CN517202 not provided germline 6 7585276 CACCCAACCACGGGCCAGAAGCTGTCACTTCAGGACGCAGTCTCCCAGGGTGTGATTGACC 118203893 24591 m.5877C>T MT-TY Oct 01, 2001 MedGen:C0022541,OMIM:530000,Orphanet:ORPHA480 Kearns Sayre syndrome somatic MT 5877 CTGTCTTTAGATTTACAGTCCAATGCTTCACTCAGCCATTTTACCTCACCCCCACTGATGT 587777419 137062 NM_139242.3(MTFMT):c.73C>T (p.Gln25Ter) MTFMT Mar 01, 2014 MedGen:C3554182,OMIM:614947,Orphanet:ORPHA319524 Combined oxidative phosphorylation deficiency 15 germline 15 65029541 CATGGCGCCAGGCGTGGGAGGCCGAGTCCCCAGTGGCGAGCACTGGCCCGACTCGGCTGGG 45469298 58805 NM_000548.4(TSC2):c.1831C>T (p.Arg611Trp) TSC2 Apr 18, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1860707,OMIM:613254;MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Tuberous sclerosis 2;Tuberous sclerosis syndrome;not provided germline 16 2070570 AGCTACACCCTGCCAATCGCGAGCAGCATCCGGCTGCAGGTATGGTGGCTGGGGTTGCGCA 121434287 18576 NM_130849.3(SLC39A4):c.599C>T (p.Pro200Leu) SLC39A4 Jul 01, 2002 MedGen:C0221036,OMIM:201100,Orphanet:ORPHA37,SNOMED CT:37702000 Hereditary acrodermatitis enteropathica germline 8 144415295 TCAGGAGCGGGTCTTGCTTCCACGCCTTGCCGAGCCCTCAGTACTTCGTGGACTTTGTGTT 28919570 38853 NM_000616.4(CD4):c.793C>T (p.Arg265Trp) CD4 Sep 01, 1993 MedGen:C3151379,OMIM:613949 Okt4 epitope deficiency germline 12 6816241 GACCTGAAGAACAAGGAAGTGTCTGTAAAACGGGTTACCCAGGACCCTAAGCTCCAGATGG 72653793 426934 NM_001171.5(ABCC6):c.2419C>T (p.Arg807Trp) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16177623 TGTAACTTCTACCCCTTCCCTGCCCAGACACGGATTCTCGTGACGCACGCACTCCACATCC 769350713 429646 NM_001211.5(BUB1B):c.340C>T (p.Arg114Ter) BUB1B Oct 12, 2016 MedGen:CN031748,OMIM:257300 Mosaic variegated aneuploidy syndrome 1 germline 15 40170637 AGAGCTGTAGAAGCACTACAAGGAGAAAAACGATATTATAGTGATCCTCGATTTCTCAATC 587783455 168630 NM_017780.3(CHD7):c.7252C>T (p.Arg2418Ter) CHD7 Apr 18, 2017 MedGen:C0265354,OMIM:214800,Orphanet:ORPHA138,SNOMED CT:47535005 CHARGE association germline 8 60856532 GAAATTGAGGCCGAAAGAGCTGCCAAGAGGCGAAATCTCATGGAGATGGTTGCCCAGCTTC 1057518414 359925 NM_003070.4(SMARCA2):c.3484C>T (p.Arg1162Cys) SMARCA2 Dec 06, 2016 MedGen:CN517202 not provided germline 9 2115849 CAGGATCTGCAGGCCCAAGACCGAGCTCACCGCATCGGGCAGCAGAACGAGGTCCGGGTAC 797045584 207085 NM_032682.5(FOXP1):c.1507C>T (p.Arg503Ter) FOXP1 Jan 09, 2017 MedGen:C3150923,OMIM:613670;MedGen:CN517202 Mental retardation with language impairment and with or without autistic features;not provided germline 3 70976964 AACTGGTTCACACGAATGTTTGCTTACTTCCGACGCAACGCGGCCACGTGGAAGGTAAGCT 587783698 168904 NM_003482.3(KMT2D):c.15844C>T (p.Arg5282Ter) KMT2D Feb 08, 2013 MedGen:CN030661,OMIM:147920 Kabuki syndrome 1 germline 12 49024887 GCTGCCATGAGAAAAGAGGCTGACATGCTGCGACTCTTCCCTGAGTATCTGAAGGGCGAGG 267606623 24149 NM_001287174.1(ABCC8):c.134C>T (p.Pro45Leu) ABCC8 Aug 01, 2007 MedGen:C1833104,OMIM:606176,Orphanet:ORPHA99885 Permanent neonatal diabetes mellitus germline 11 17476643 CGCACGTCTTCCTACTCTTCATCACCTTCCCCATCCTCTTCATTGGTGAGTGCGCGCAGCG 121913569 29329 NM_000426.3(LAMA2):c.3718C>T (p.Gln1240Ter) LAMA2 Apr 03, 2013 MedGen:C1263858,OMIM:607855,Orphanet:ORPHA258,SNOMED CT:111503008 Merosin deficient congenital muscular dystrophy germline 6 129315638 TTGGAACCTTTTTATTGGAAACTTCCAGAACAATTTGAAGGAAAGAAGGTAAGCACAAGAA 28940314 17088 NM_152443.2(RDH12):c.146C>T (p.Thr49Met) RDH12 Dec 15, 2005 MedGen:C2675186,OMIM:612712 Leber congenital amaurosis 13 germline 14 67724550 GCAAGGTAGTGGTGATCACTGGCGCCAACACGGGCATTGGCAAGGAGACGGCCAGAGAGCT 34315806 404644 NM_002111.8(HTT):c.3785C>T (p.Thr1262Met) HTT Apr 15, 2017 MedGen:CN643601,OMIM:617435 Lopes-Maciel-Rodan syndrome germline 4 3160307 CCAAGGTCACGCTGGATCTTCAGAACAGCACGGAAAAGTTTGGAGGGTTTCTCCGCTCAGC 797045046 205793 NM_000516.5(GNAS):c.34C>T (p.Gln12Ter) GNAS Oct 07, 2014 Human Phenotype Ontology:HP:0000852,MedGen:C0033806,OMIM:103580,Orphanet:ORPHA97593;MedGen:C0033835,OMIM:612463,Orphanet:ORPHA79445,SNOMED CT:237659007 Pseudohypoparathyroidism type 1A;Pseudopseudohypoparathyroidism germline 20 58891760 GGCTGCCTCGGGAACAGTAAGACCGAGGACCAGCGCAACGAGGAGAAGGCGCAGCGTGAGG 180177184 200456 NM_000030.2(AGXT):c.242C>T (p.Ser81Leu) AGXT Nov 27, 2014 MedGen:C0268164,OMIM:259900,Orphanet:ORPHA93598,SNOMED CT:65520001 Primary hyperoxaluria, type I germline 2 240869246 GGAACCCACTCACACTGGTCATCTCTGGCTCGGGACACTGTGCCCTGGAGGCCGCCCTGGT 879254898 246151 NM_000527.4(LDLR):c.1426C>T (p.Pro476Ser) LDLR Mar 25, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11113602 GACACCGTCATCAGCAGAGACATCCAGGCCCCCGACGGGCTGGCTGTGGACTGGATCCACA 398123478 99225 NM_000543.4(SMPD1):c.1624C>T (p.Arg542Ter) SMPD1 Aug 30, 2012 MedGen:C0268243,OMIM:607616,Orphanet:ORPHA77293,SNOMED CT:39390005 Niemann-Pick disease, type B germline 11 6394335 ATACCGCACTGGCAGCTTCTCTACAGGGCTCGAGAAACCTATGGGCTGCCCAACACACTGC 749995448 187134 NM_021956.4(GRIK2):c.592C>T (p.Arg198Ter) GRIK2 Mar 01, 2015 MedGen:C1970198,OMIM:611092 Mental retardation, autosomal recessive 6 germline 6 101676673 CTCATCAAAGCTCCATCAAGGTATAATCTTCGACTCAAAATTCGTCAGTTACCTGCTGATA 121913003 31865 NM_001927.3(DES):c.1216C>T (p.Arg406Trp) DES Feb 10, 2017 MedGen:C1832370,OMIM:601419,Orphanet:ORPHA98909;MedGen:CN517202 Myofibrillar myopathy 1;not provided germline;unknown 2 219421532 ATGGCCCTGGATGTGGAGATTGCCACCTACCGGAAGCTGCTGGAGGGAGAGGAGAGCCGGT 397514744 75288 NM_022114.3(PRDM16):c.872C>T (p.Pro291Leu) PRDM16 Jul 11, 2013 MedGen:CN178850 Dilated cardiomyopathy 1LL germline 1 3402986 ACGAGTGCAAGGACTGCGAGCGGATGTTCCCCAACAAGTACAGGTGCCACGCCCTCCTCTG 121912561 23621 NM_004999.3(MYO6):c.2545C>T (p.Arg849Ter) MYO6 Apr 15, 2008 MedGen:C1853441,OMIM:606346 Deafness, autosomal dominant 22 germline 6 75886881 GGTCTGGTTAAGGTGGGCACACTGAAAAAACGACTTGATAAATTTAATGAGGTAGTCAGTG 121434489 23120 NM_000430.3(PAFAH1B1):c.22C>T (p.Arg8Ter) PAFAH1B1 Mar 31, 2014 MedGen:C1843916,OMIM:607432;MedGen:C1848201,Orphanet:ORPHA99796 Lissencephaly 1;Subcortical band heterotopia germline;unknown 17 2638310 ACAGCCAAGATGGTGCTGTCCCAGAGACAACGAGATGAACTGTAAGTTTCTTTGTTTTGTG 397515509 76428 m.4025C>T MT-ND1 Sep 19, 2013 Human Phenotype Ontology:HP:0001112,MedGen:C0917796,OMIM:535000,Orphanet:ORPHA104,SNOMED CT:58610003 Leber's optic atrophy not provided MT 4025 ACATTATTATAATAAACACCCTCACCACTACAATCTTCCTAGGAACAACATATGACGCACT 28937907 19148 NM_138694.3(PKHD1):c.4991C>T (p.Ser1664Phe) PKHD1 Mar 01, 2002 MedGen:C0085548,OMIM:263200,Orphanet:ORPHA731,SNOMED CT:28770003 Autosomal recessive polycystic kidney disease germline 6 52024819 AGGCCTTTACCCCAGAATTGATCTCTATTTCTCAGAGCGATGACATCTTAACCTTTGCAGT 193922185 44706 NM_000138.4(FBN1):c.1948C>T (p.Arg650Cys) FBN1 Sep 19, 2016 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:CN517202;MedGen:CN169374 Marfan syndrome;not provided;not specified germline 15 48505037 TTCCCTGGACTGGCTGTGGGTCTGGATGGCCGTGTGTGTGTTGGTAAGAAAACATCATGGC 587777621 153714 NM_001759.3(CCND2):c.841C>T (p.Pro281Ser) CCND2 Aug 08, 2016 MedGen:C4014742,OMIM:615938 Megalencephaly-polymicrogyria-polydactyly-hydrocephalus syndrome 3 germline 12 4299980 TCGGAGGATGAACTGGACCAAGCCAGCACCCCTACAGACGTGCGGGATATCGACCTGTGAG 748394238 264085 NM_201548.4(CERKL):c.1012C>T (p.Arg338Ter) CERKL Mar 21, 2016 MedGen:CN517202 not provided germline 2 181548741 GGAAGAACTTTGGCTCTGGCAGAAAAATATCGATGGATGTCCCCTAACCAACGGAGAGATT 121909131 22630 NM_000085.4(CLCNKB):c.371C>T (p.Pro124Leu) CLCNKB Oct 01, 1997 MedGen:C1846343,OMIM:607364,Orphanet:ORPHA93605 Bartter syndrome type 3 germline 1 16047917 CTGCCCACCCCCGCCAAGGTTCTGGAATCCCGGAGGTGAAGACCATGTTGGCGGGTGTGGT 1135402755 424954 NM_173543.2(DZIP1L):c.463C>T (p.Gln155Ter) DZIP1L Aug 07, 2017 MedGen:CN381221,OMIM:617610 POLYCYSTIC KIDNEY DISEASE 5 germline 3 138103509 CGGCGTCGCAAGATGATCAGCACCCTGCAGCAGCTGCTAATGCAGACAGGCACCCACAGCT -1 444496 NM_003995.3(NPR2):c.2761C>T (p.Arg921Ter) NPR2 Jul 20, 2017 MedGen:CN517202 not provided germline 9 35808557 GCTTACATGGTGGTATCTGGCCTCCCAGGCCGAAATGGTCAACGCCATGCACCAGAAATTG 756908183 186682 NM_000128.3(F11):c.400C>T (p.Gln134Ter) F11 Jun 26, 2016 MedGen:C0015523,OMIM:612416,Orphanet:ORPHA329,SNOMED CT:49762007 Hereditary factor XI deficiency disease germline;unknown 4 186274190 AACTATAACAGCTCAGTTGCCAAGAGTGCTCAAGAATGCCAAGAAAGATGCACGGATGACG 80359247 67579 NM_000059.3(BRCA2):c.9883C>T (p.Gln3295Ter) BRCA2 Nov 01, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145;MedGen:CN517202 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome;not provided germline 13 32398396 CCCATTTGTACATTTGTTTCTCCGGCTGCACAGAAGGCATTTCAGCCACCAAGGAGTTGTG -1 444733 NM_001197104.1(KMT2A):c.7438C>T (p.Arg2480Ter) KMT2A Jul 12, 2017 MedGen:CN517202 not provided germline 11 118503330 GAGGTTTTGACTCCTGAGTATATGGGCCAACGACCATGTAACAATGTTTCTTCTGATAAGA 137852472 25371 NM_000132.3(F8):c.6956C>T (p.Pro2319Leu) F8 Oct 01, 1991 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154837697 TCACACCTGTGGTGAACTCTCTAGACCCACCGTTACTGACTCGCTACCTTCGAATTCACCC 1057518216 360346 NM_000346.3(SOX9):c.1180C>T (p.Arg394Ter) SOX9 Jun 29, 2017 MedGen:C1861922,OMIM:114290,Orphanet:ORPHA140,SNOMED CT:74928006;MedGen:CN517202 Camptomelic dysplasia;not provided germline 17 72124037 ACGCTGAGCAGCGAGCCGGGCCAGTCCCAGCGAACGCACATCAAGACGGAGCAGCTGAGCC 397514623 48455 NM_015295.2(SMCHD1):c.2068C>T (p.Pro690Ser) SMCHD1 Dec 18, 2012 Gene:2490,MedGen:C1834671,OMIM:158901 Facioscapulohumeral muscular dystrophy 2 germline 18 2707567 ACATTAATATGCTGGTTTCATAACAGGCTCCCTGATAGATTGTCAGTAACTTGGCCTGAAG 398124561 102456 NM_000056.4(BCKDHB):c.1016C>T (p.Ser339Leu) BCKDHB Apr 22, 2015 MedGen:C0024776,OMIM:248600,SNOMED CT:27718001 Maple syrup urine disease germline 6 80273199 ACGAGGCTCCCTTGACAGGCGGCTTTGCATCGGAAATCAGCTCTACAGTTCAGGTAGAGTA -1 453998 NM_000038.5(APC):c.5341C>T (p.Gln1781Ter) APC May 11, 2017 MedGen:C2713442,OMIM:175100 Familial adenomatous polyposis 1 germline 5 112840935 AAACCAACTTCACCAGTAAAACCTATACCACAAAATACTGAATATAGGACACGTGTAAGAA -1 482207 NM_175914.4(HNF4A):c.514C>T (p.Gln172Ter) HNF4A Jun 05, 2017 MedGen:CN517202 not provided germline 20 44414594 ATCGCAGATGTGTGTGAGTCCATGAAGGAGCAGCTGCTGGTTCTCGTTGAGTGGGCCAAGT -1 451498 NM_000179.2(MSH6):c.1423C>T (p.Gln475Ter) MSH6 Jul 14, 2017 MedGen:C0009405,Orphanet:ORPHA443090 Hereditary nonpolyposis colon cancer germline 2 47799406 GCATTTGGCCGTTATTCAGATTCCCTGGTGCAGAAGGGCTATAAAGTAGCACGAGTGGAAC 72559722 186816 NM_001287174.1(ABCC8):c.2509C>T (p.Arg837Ter) ABCC8 Jun 24, 2016 MedGen:C1257959,OMIM:256450,SNOMED CT:360339005;MedGen:CN517202 Persistent hyperinsulinemic hypoglycemia of infancy;not provided germline;unknown 11 17412716 GGCATCAACCTGTCTGGTGGTCAACGCCAGCGAATCAGTGTGGCCCGAGCCCTCTACCAGC 796052335 203268 NM_001042432.1(CLN3):c.949C>T (p.Gln317Ter) CLN3 Apr 18, 2014 MedGen:CN517202 not provided germline 16 28482340 TTTTTCTGGAACACTTCCCTGAGTCACGCTCAGCAATACCGCTGGTAAGAGGAGCGAGGGC 9924755 426928 NM_001171.5(ABCC6):c.2490C>T (p.Ala830=) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16177552 TGATTGGATCATAGTGCTGGCAAATGGGGCCATCGCAGAGATGGGTTCCTACCAGGAGCTT 773446161 362131 NM_000520.5(HEXA):c.316C>T (p.Gln106Ter) HEXA Jun 17, 2014 MedGen:C0039373,OMIM:272800,Orphanet:ORPHA845,SNOMED CT:111385000 Tay-Sachs disease germline 15 72356555 GTTGTCTCTGTAGTCACACCTGGATGTAACCAGCTTCCTACTTTGGAGTCAGTGGAGAATT 769455 32890 NM_000041.3(APOE):c.487C>T (p.Arg163Cys) APOE Nov 01, 1992 MedGen:C0020479,OMIM:617347,Orphanet:ORPHA412,SNOMED CT:398796005;MedGen:C0020479,OMIM:617347,Orphanet:ORPHA412,SNOMED CT:398796005 Familial type 3 hyperlipoproteinemia;Familial type 3 hyperlipoproteinemia germline 19 44908783 GTGCGCCTCGCCTCCCACCTGCGCAAGCTGCGTAAGCGGCTCCTCCGCGATGCCGATGACC -1 426477 NM_006306.3(SMC1A):c.2272C>T (p.Arg758Ter) SMC1A Jun 01, 2017 MedGen:CN517202 not provided germline X 53403818 ATTAATGATATCAAGAGGATCATTCAGAGCCGAGAGAGGGAAATGAAAGACTTGAAGGAGA 113905529 51543 NM_000138.4(FBN1):c.493C>T (p.Arg165Ter) FBN1 Feb 13, 2017 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:CN517202 Marfan syndrome;not provided germline 15 48596328 CTCAATGGAGGAAGGTGTGTGGCCCCAAATCGATGTGCATGCACTTACGGATTTACTGGAC 863224650 420474 NM_000264.4(PTCH1):c.1804C>T (p.Arg602Ter) PTCH1 Jan 28, 2015 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 9 95469856 TTTCCTGCAATTCTCAGCATGGATTTATATCGACGCGAGGACAGGAGACTGGATATTTTCT 80356519 21435 NM_001457.3(FLNB):c.2452C>T (p.Arg818Ter) FLNB Oct 09, 2008 MedGen:C1848934,OMIM:272460,Orphanet:ORPHA3275 Spondylocarpotarsal synostosis syndrome germline 3 58110138 ACAGTCAAATATGTGCCTCCTGCTGCTGGGCGATACACTATCAAAGTTCTCTTTGCATCTC 104893755 28642 NM_001122757.2(POU1F1):c.889C>T (p.Arg297Trp) POU1F1 Aug 01, 2005 MedGen:C2751608,OMIM:613038 Pituitary hormone deficiency, combined 1 germline 3 87259959 TGGTTTTGCAACCGGAGGCAGAGAGAAAAACGGGTGAAAACAAGTCTGAATCAGAGTTTAT 137852623 24478 NM_000023.3(SGCA):c.850C>T (p.Arg284Cys) SGCA Mar 16, 2017 MedGen:C2936332,OMIM:608099,Orphanet:ORPHA62;MedGen:CN517202 Limb-girdle muscular dystrophy, type 2D;not provided germline;unknown 17 50170245 TTCTTCTGCCCACCCACTGAGGCCCCAGACCGTGACTTCTTGGTGGATGCTCTGGTCACCC -1 424467 NM_172079.2(CAMK2B):c.416C>T (p.Pro139Leu) CAMK2B Dec 08, 2017 Human Phenotype Ontology:HP:0001249,MedGen:C1843367;MedGen:CN679648,OMIM:617799 Intellectual disability;MENTAL RETARDATION, AUTOSOMAL DOMINANT 54 de novo;germline 7 44243526 GCACCCTTGTGCCGGTCACCTCCCTGCAGCCGGAGAACCTGCTTCTGGCCAGCAAGTGCAA 121908924 21694 NM_005677.3(COLQ):c.943C>T (p.Arg315Ter) COLQ Nov 04, 2016 MedGen:C1864233,OMIM:603034,Orphanet:ORPHA98915;MedGen:CN517202 Endplate acetylcholinesterase deficiency;not provided germline 3 15458197 GGGGAATCTGTGTATGGGCCCAGTTCCCCGCGAGTTCCTGTGGTAAGGCTTTCTGGGAGAA 387906512 27251 NM_000490.4(AVP):c.56C>T (p.Ala19Val) AVP Feb 01, 1998 Human Phenotype Ontology:HP:0000863,MedGen:C0687720,OMIM:125700,Orphanet:ORPHA178029,SNOMED CT:45369008 Neurohypophyseal diabetes insipidus germline 20 3084619 GCTTCCTCGGCCTACTGGCCTTCTCCTCCGCGTGCTACTTCCAGAACTGCCCGAGGGGCGG 781252161 214172 NM_001080522.2(CC2D2A):c.1558C>T (p.Arg520Ter) CC2D2A Jun 14, 2016 Human Phenotype Ontology:HP:0002335,MedGen:C0431399,Orphanet:ORPHA475,SNOMED CT:253175003,SNOMED CT:716997004;MedGen:C2676788,OMIM:612285;MedGen:C0265215,Orphanet:ORPHA564,SNOMED CT:29076005 Joubert syndrome;Joubert syndrome 9;Meckel-Gruber syndrome germline;unknown 4 15533284 ATAAAAGTTTGGAAAGAGATGAAATCCCTTCGAGAGTTCCAGAGATTTACAAATACTCCCT 121913612 29196 NM_005373.2(MPL):c.1904C>T (p.Pro635Leu) MPL Jun 01, 2008 MedGen:C1327915,OMIM:604498,Orphanet:ORPHA3319 Congenital amegakaryocytic thrombocytopenia germline 1 43352768 CCTACCTACCACTAAGCTATTGGCAGCAGCCTTGAGGACAGGCTCCTCACTCCCAGTTCCC 121912852 32498 NM_000094.3(COL7A1):c.7411C>T (p.Arg2471Ter) COL7A1 Oct 21, 2016 MedGen:C0079474,OMIM:226600,SNOMED CT:48528004;MedGen:CN517202 Recessive dystrophic epidermolysis bullosa;not provided germline 3 48570304 GGAGACCCTGGAGTAGGGCTGCCTGGGCCCCGAGGCGAGCGTGGGGAGCCAGGCATCCGGG 886039343 259846 NM_004415.3(DSP):c.268C>T (p.Gln90Ter) DSP May 01, 2017 MedGen:C1843896,OMIM:607450;MedGen:CN517202 Arrhythmogenic right ventricular cardiomyopathy, type 8;not provided germline 6 7555815 GACTGCTTGATGCGAGCAGAGCTCATCGTGCAGCCTGTAAGCTTTCCCTGTTCCCATCGCT 794727511 193635 NM_016180.4(SLC45A2):c.856C>T (p.Gln286Ter) SLC45A2 Jan 22, 2015 MedGen:C1847836,OMIM:606574,Orphanet:ORPHA79435 Oculocutaneous albinism type 4 germline 5 33963723 AATGGTTACGTAAATCCAGAGCTGGCAATGCAGGGAGCAAAAAACAAAAATCATGCTGAAC -1 483201 NM_000465.3(BARD1):c.2143C>T (p.Gln715Ter) BARD1 Jul 05, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 2 214728867 AGAAAGCCCAAGCCAGACAGTGACGTGACTCAGACCATCAATACAGTCGCATACCATGCGA 794726870 190189 NM_138395.3(MARS2):c.424C>T (p.Arg142Trp) MARS2 Jun 01, 2015 MedGen:C4225329,OMIM:616430,Orphanet:ORPHA447954 Combined oxidative phosphorylation deficiency 25 germline 2 197705829 TGCACAGATTTCATCCGCACCACGGAGGCCCGGCACCGGGTGGCTGTGCAGCACTTCTGGG 587781682 151069 NM_000143.3(FH):c.697C>T (p.Arg233Cys) FH Aug 14, 2017 MedGen:C0342770,OMIM:606812,Orphanet:ORPHA24,SNOMED CT:237983002;MedGen:C0027672,SNOMED CT:699346009;Human Phenotype Ontology:HP:0007437,MedGen:C1708350,OMIM:150800,Orphanet:ORPHA523;MedGen:CN517202 Fumarase deficiency;Hereditary cancer-predisposing syndrome;Multiple cutaneous leiomyomas;not provided germline 1 241508644 AAAGAGTTTGCACAGATCATCAAGATTGGACGTACTCATACTCAGGATGCTGTTCCACTTA 28940895 18131 NM_000487.5(ARSA):c.1229C>T (p.Thr410Ile) ARSA Jul 01, 2001 MedGen:C0751279,Orphanet:ORPHA309271,SNOMED CT:24326000 Metachromatic leukodystrophy, adult type germline 22 50625446 CCCCCTCCCCAGGCTCTGCCCACAGTGATACCACTGCAGACCCTGCCTGCCACGCCTCCAG 118192224 34613 NM_172107.3(KCNQ2):c.1288C>T (p.Pro430Ser) KCNQ2 Mar 31, 2016 MedGen:C1852587,OMIM:121200 Benign familial neonatal seizures 1 germline 20 63419632 CCGTGCAGAGGGCCCCTGTGTGGATGCTGCCCCGGACGCTCTAGGTACCGCGGAACACGCC 80356947 70087 NM_007294.3(BRCA1):c.514C>T (p.Gln172Ter) BRCA1 Jul 21, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome germline 17 43099808 GTGAGAACTCTGAGGACAAAGCAGCGGATACAACCTCAAAAGACGTCTGTCTACATTGAAT 397514364 36351 NM_000060.4(BTD):c.485C>T (p.Ala162Val) BTD Dec 04, 2012 MedGen:C0220754,OMIM:253260,Orphanet:ORPHA79241,SNOMED CT:8808004 Biotinidase deficiency not provided 3 15644341 TCTAGGTGCTCCAGCGCCTGAGTTGTATGGCCATCAGGGGAGATATGTTCTTGGTGGCCAA 121918670 27726 NM_000549.4(TSHB):c.205C>T (p.Gln69Ter) TSHB Sep 01, 2001 MedGen:C0271789,OMIM:275100,Orphanet:ORPHA90674,SNOMED CT:82598004 Secondary hypothyroidism germline 1 115034015 AAACTGTTTCTTCCCAAATATGCTCTGTCCCAGGATGTTTGCACATATAGAGACTTCATCT 794728416 197373 NM_000238.3(KCNH2):c.31C>T (p.Gln11Ter) KCNH2 Feb 15, 2012 MedGen:CN517202 not provided germline 7 150977883 ATGCCGGTGCGGAGGGGCCACGTCGCGCCGCAGAACACCTTCCTGGACACCATCATCCGCA 199473161 78626 NM_198056.2(SCN5A):c.2440C>T (p.Arg814Trp) SCN5A Jul 06, 2017 MedGen:C1142166,Orphanet:ORPHA130,SNOMED CT:418818005;MedGen:CN230736;EFO:EFO_0000407,Human Phenotype Ontology:HP:0001644,MedGen:C0007193,Orphanet:ORPHA217604,SNOMED CT:195021004;MedGen:CN517202 Brugada syndrome;Cardiovascular phenotype;Primary dilated cardiomyopathy;not provided germline 3 38586038 GGTCCCCTCCTCTTCCTCCTTCCCCAGCTGCGGGTCTTCAAGCTGGCCAAATCATGGCCCA 879255031 246345 NM_000527.4(LDLR):c.1813C>T (p.Leu605=) LDLR Mar 25, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline;not applicable 19 11116966 CGGAAGACCATCTTGGAGGATGAAAAGAGGCTGGCCCACCCCTTCTCCTTGGCCGTCTTTG 199422227 25525 NM_000202.7(IDS):c.1327C>T (p.Arg443Ter) IDS Dec 13, 2012 MedGen:C0026705,OMIM:309900,SNOMED CT:70737009 Mucopolysaccharidosis, MPS-II germline;maternal X 149483072 AGAGAAGGCAAGAACCTTCTGAAGCATTTTCGATTCCGTGACTTGGAAGAGGATCCGTACC -1 481838 NM_003165.3(STXBP1):c.1075C>T (p.Gln359Ter) STXBP1 Jun 27, 2017 MedGen:CN517202 not provided germline 9 127673226 CACCTTGCTGAGGACTGTATGAAGCATTACCAAGGCACCGTAGACAAACTCTGCCGAGTGG 145119918 259934 NM_147191.1(MMP21):c.1372C>T (p.Arg458Ter) MMP21 Mar 08, 2016 MedGen:CN517202 not provided germline 10 125767570 CCAAGTCCCCTAGACACGGCGTTTTATGACCGAAGACAGAAGTTAATTTACTTCTTCAAGG 148617572 186706 NM_138694.3(PKHD1):c.10444C>T (p.Arg3482Cys) PKHD1 Aug 05, 2016 MedGen:C0085548,OMIM:263200,Orphanet:ORPHA731,SNOMED CT:28770003 Autosomal recessive polycystic kidney disease germline;unknown 6 51659682 TGCTTCATGGATCAAACTCCTCAAGTTTTGCGCTTTTTTCTATTGGGGAACAAAAGTACCT 192732174 98814 NM_000404.3(GLB1):c.442C>T (p.Arg148Cys) GLB1 Jul 08, 2013 MedGen:C0268272,OMIM:230600,Orphanet:ORPHA79256,SNOMED CT:18756002;MedGen:C0268273,OMIM:230650,Orphanet:ORPHA79257;MedGen:C0268271,OMIM:230500,Orphanet:ORPHA79255,SNOMED CT:238026007;MedGen:C0086652,OMIM:253010,Orphanet:ORPHA309310,SNOMED CT:238044004 GM1 gangliosidosis type 2;Gangliosidosis GM1 type 3;Infantile GM1 gangliosidosis;Mucopolysaccharidosis, MPS-IV-B germline 3 33068245 TGGCTGCTAGAGAAAGAGTCTATTCTTCTCCGCTCCTCCGACCCAGGTAGGTTGTTACAGA 187930476 406825 NM_005670.3(EPM2A):c.163C>T (p.Gln55Ter) EPM2A Jun 29, 2015 MedGen:CN517202 not provided germline 6 145735336 ACCGCGGCGGGCGACGGGGCCCTGGCCCTGCAGGAGCCGGGCCTGTGGCTCGGGGAGGTGG 267606939 33498 NM_024411.4(PDYN):c.643C>T (p.Arg215Cys) PDYN Nov 12, 2010 MedGen:C1853250,OMIM:610245,Orphanet:ORPHA101108 Spinocerebellar ataxia 23 germline 20 1980445 AAACGCTATGGGGGCTTCTTGCGGCGCATTCGTCCCAAGCTCAAGTGGGACAACCAGAAGC -1 455058 NM_002890.2(RASA1):c.2707C>T (p.Arg903Ter) RASA1 May 09, 2017 MedGen:C1842180,OMIM:608354,Orphanet:ORPHA137667 Capillary malformation-arteriovenous malformation germline 5 87383729 TCCCTCCCATTCAGTGGTTTTGTTTTTCTTCGACTCATCTGTCCTGCCATCCTGAATCCAC -1 431323 NM_012160.4(FBXL4):c.316C>T (p.Gln106Ter) FBXL4 Nov 16, 2017 MedGen:C3809592,OMIM:615471,Orphanet:ORPHA369897 Mitochondrial DNA depletion syndrome 13 (encephalomyopathic type) germline 6 98926673 GTGTTTCGAACTTATGGGACATGGTGGGATCAGTGTCCTAGTGCTTCCTTGCCATTCAAGA 111033848 36448 NM_000155.3(GALT):c.25C>T (p.Gln9Ter) GALT Jun 28, 2016 MedGen:C0268151,OMIM:230400,Orphanet:ORPHA79239,SNOMED CT:124354006 Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase unknown 9 34646729 GGCCTCATGTCGCGCAGTGGAACCGATCCTCAGCAACGCCAGCAGGCGTCAGAGGCGGACG 121913015 31838 NM_000281.3(PCBD1):c.292C>T (p.Gln98Ter) PCBD1 Oct 01, 2014 MedGen:C1849700,OMIM:264070,Orphanet:ORPHA1578 Hyperphenylalaninemia, BH4-deficient, D germline 10 70883973 CGGGACATAAACCTGGCCAGCTTCATCGAACAAGTAGCAGTGTCCATGACATAGACCCTGC 587782750 152540 NM_004360.4(CDH1):c.1921C>T (p.Gln641Ter) CDH1 Oct 06, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 16 68822210 ACACACGGGGCGAGTGCCAACTGGACCATTCAGTACAACGACCCAAGTGGGTACCTGAGTT 555811074 440115 NM_052844.3(WDR34):c.544C>T (p.Arg182Trp) WDR34 Jun 01, 2017 MedGen:C0265275,Orphanet:ORPHA474,SNOMED CT:75049004 Jeune thoracic dystrophy paternal 9 128636919 ACTGGCTCTGTGGTGGCCTGTGCCTACGGCCGGTGAGTGGCAGCGGGGCAGGTGAGGGGCA 1060499834 390701 NM_000348.3(SRD5A2):c.211C>T (p.Gln71Ter) SRD5A2 Oct 30, 2015 MedGen:C0268297,OMIM:264600,Orphanet:ORPHA753,SNOMED CT:57514000 3-Oxo-5 alpha-steroid delta 4-dehydrogenase deficiency paternal 2 31580690 TTCGCGGTGCCCGCGGGGATCCTCGCCCGGCAGCCCCTCTCCCTCTTCGGGCCACCTGGGA 151340616 27174 NM_000387.5(SLC25A20):c.496C>T (p.Arg166Ter) SLC25A20 May 01, 1999 MedGen:C0342791,OMIM:212138,Orphanet:ORPHA159,SNOMED CT:238003000 Carnitine acylcarnitine translocase deficiency germline 3 48862581 GCAAAGAAGCTGTACCAGGAGTTTGGGATCCGAGGCATCTACAAAGGGACTGTGCTTACCC 773729410 194345 NM_001128227.2(GNE):c.829C>T (p.Arg277Trp) GNE May 19, 2016 MedGen:C1833373,OMIM:600737;MedGen:C0342853,OMIM:269921,Orphanet:ORPHA3166,SNOMED CT:238051008 Inclusion body myopathy 2;Sialuria germline 9 36236865 ACATTGGATGCACTTATCTCATTTAACAAGCGGACCCTAGTCCTGTTTCCAAATATTGACG 28942071 18945 NM_000520.5(HEXA):c.1510C>T (p.Arg504Cys) HEXA Apr 18, 2014 MedGen:CN068774;MedGen:C0039373,OMIM:272800,Orphanet:ORPHA845,SNOMED CT:111385000 Gm2-gangliosidosis, chronic;Tay-Sachs disease germline;unknown 15 72345462 ACATTTGCCTATGAACGTTTGTCACACTTCCGCTGTGAATTGCTGAGGTAAGCAAGCTGTG 63750909 94668 NM_000179.2(MSH6):c.1444C>T (p.Arg482Ter) MSH6 Jun 13, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0009405,Orphanet:ORPHA443090;MedGen:C1833477,OMIM:614350;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Hereditary nonpolyposis colon cancer;Hereditary nonpolyposis colorectal cancer type 5;Lynch syndrome;not provided germline;unknown 2 47799427 TCCCTGGTGCAGAAGGGCTATAAAGTAGCACGAGTGGAACAGACTGAGACTCCAGAAATGA 119103271 17292 NM_000265.5(NCF1):c.271C>T (p.Gln91Ter) NCF1 Dec 01, 2006 MedGen:C1856251,OMIM:233700 Chronic granulomatous disease, autosomal recessive cytochrome b-positive, type 1 germline 7 74779298 TTTGACGGGCAGCGGGCCGCCGAGAACCGCCAGGGCACACTTACCGAGTACTGCAGCACGC 587782446 152126 NM_024675.3(PALB2):c.1258C>T (p.Gln420Ter) PALB2 May 11, 2017 MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C0027672,SNOMED CT:699346009 Familial cancer of breast;Hereditary cancer-predisposing syndrome germline 16 23635288 GTTAGAACAACACGAAGCATGTCCAATTGCCAGAGGAAAGTAGCCGTGGAGGCTGTCATTC 267607158 27696 NM_001256850.1(TTN):c.12157C>T (p.Gln4053Ter) TTN Feb 22, 2002 MedGen:C1858763,OMIM:604145 Dilated cardiomyopathy 1G germline 2 178740125 AAAAGAGAGCCCGTGGCAATAAAGAAAGTGCAGGAGGTACAGGGAAGGGACCTTCTTTCTA 398122965 96871 NM_001199107.1(TBC1D24):c.724C>T (p.Arg242Cys) TBC1D24 Jan 01, 2018 MedGen:C1857345,OMIM:220500;MedGen:C3809173,OMIM:615338,Orphanet:ORPHA352596;MedGen:CN517202 Digitorenocerebral syndrome;Early infantile epileptic encephalopathy 16;not provided germline 16 2496872 TTCCTGGTGGAGGGCTACAAGGTGCTGTACCGCGTGGCGCTGGCCATCCTCAAGTTCTTCC 121909138 22629 NM_004070.3(CLCNKA):c.778C>T (p.Gln260Ter) CLCNKA Mar 01, 2008 MedGen:C2751312,OMIM:613090 Bartter syndrome, type 4b germline 1 16027432 TTCCGGCTCCTGGCAGTCTTCAACAGCGAGCAGGGTGAGCCCCCTGGGCTGCCTGACCCTG 886042000 264380 NM_006766.4(KAT6A):c.3505C>T (p.Arg1169Ter) KAT6A Oct 23, 2017 MedGen:C4225396,OMIM:616268,Orphanet:ORPHA457193;MedGen:CN517202 Mental retardation, autosomal dominant 32;not provided germline;paternal 8 41934715 AAACCAATCCACTGGAAGAAAAGACCTGGTCGAAAACCAGGATTTAAGTTGAGTCGGGAAA 104894192 20053 NM_021926.3(ALX4):c.736C>T (p.Gln246Ter) ALX4 Jan 01, 2001 MedGen:C1865044,OMIM:609597 Parietal foramina 2 germline 11 44275389 ACCCACTACCCAGACGTGTATGCGCGGGAACAGCTGGCCATGAGGACAGACCTCACTGAGG 45465195 58402 NM_000548.4(TSC2):c.3094C>T (p.Arg1032Ter) TSC2 May 25, 2017 MedGen:C1860707,OMIM:613254;MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000;MedGen:CN517202 Tuberous sclerosis 2;Tuberous sclerosis syndrome;not provided germline 16 2079159 CTCACGGAAACCTGTCTGGACATGATGGCTCGATACGTCTTCTCCAACTTCACGGCTGTCC 121909153 22822 NM_000288.3(PEX7):c.694C>T (p.Arg232Ter) PEX7 Mar 03, 2016 MedGen:C1859133,OMIM:215100,Orphanet:ORPHA309789;MedGen:CN517202 Rhizomelic chondrodysplasia punctata type 1;not provided germline;unknown 6 136869950 AGTTTGAGAGGCTGGGACTTAAGGAATGTACGACAACCAGTGTTTGAACTTCTTGGTCATA 886041718 265033 NM_020717.3(SHROOM4):c.3739C>T (p.Gln1247Ter) SHROOM4 Apr 21, 2016 MedGen:CN517202 not provided germline X 50607403 GGCATTGGTGGGCTTTGGAGGACATCGGGACAGGAAGCCACTGAATCCGCCAAGTAAGTAC 121912845 32490 NM_000094.3(COL7A1):c.5096C>T (p.Pro1699Leu) COL7A1 Dec 01, 2002 MedGen:C4015945 Epidermolysis bullosa, pretibial, autosomal recessive germline 3 48580301 CATCTGGACCCAAGGGTGACCGTGGGGAGCCGGTGAGTAGGGCTGGTGTCCTGGGCTCAGA 878853123 237482 NM_001567.3(INPPL1):c.2071C>T (p.Arg691Trp) INPPL1 Jan 08, 2013 MedGen:C0432219,OMIM:258480,Orphanet:ORPHA2746,SNOMED CT:254068007 Opsismodysplasia inherited 11 72233471 GTCCGGACCAATGTGCCCTCATGGTGTGACCGGATTCTGTGGAAATCCTACCCTGAAACTC -1 433018 NM_022650.2(RASA1):c.1003C>T (p.Arg335Ter) RASA1 Sep 16, 2016 MedGen:CN169374 not specified germline 5 87363428 GCCCAACTTATTTATTTTGAAAGCGAAAAACGAGCTACCAAACCAAAAGGATTAATAGATC 111033725 36548 NM_000155.3(GALT):c.556C>T (p.His186Tyr) GALT Jan 27, 2016 MedGen:C0268151,OMIM:230400,Orphanet:ORPHA79239,SNOMED CT:124354006;MedGen:CN517202 Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase;not provided germline 9 34648163 GCCATGATGGGCTGTTCTAACCCCCACCCCCACTGCCAGGTAAGGGTGTCAGGGGCTCCAG -1 446680 NM_000377.2(WAS):c.961C>T (p.Arg321Ter) WAS Aug 21, 2017 MedGen:CN517202 not provided germline X 48688689 GAGCCACTTCCGCCGCCCCCACCGCCATCTCGAGGAGGGAACCAGCTCCCCCGGCCCCCTA 267606955 33463 NM_016341.3(PLCE1):c.3736C>T (p.Arg1246Ter) PLCE1 Jul 01, 2010 MedGen:C1853124,OMIM:610725 Nephrotic syndrome, type 3 germline 10 94259072 CTGTTTGATGTCTATGCAGTGCCCTGCAACCGATCTGGCTCCGAGTCAGCCCCACTCTACA 398123942 100497 NM_004006.2(DMD):c.3580C>T (p.Gln1194Ter) DMD May 06, 2013 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009;MedGen:C3668940,OMIM:302045;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Becker muscular dystrophy;Dilated cardiomyopathy 3B;Duchenne muscular dystrophy germline X 32454685 GATTTTGAATATAAAACTCCAGATGAATTACAGAAAGCAGTTGAAGAGATGAAGGTAAAAA 113994102 20340 NM_004715.4(CTDP1):c.863+389C>T CTDP1 Mar 16, 2015 MedGen:C1858726,OMIM:604168 Congenital Cataracts, Facial Dysmorphism, and Neuropathy germline 18 79710825 CTCAGCCTCCCAAAGTGTTGGGATTACAGGCATGAGCCACTGCACCCGGCCTAGAGCAGTA 121964986 27019 NM_000481.3(AMT):c.574C>T (p.Gln192Ter) AMT Jun 01, 2000 Human Phenotype Ontology:HP:0008288,MedGen:C0751748,OMIM:605899,Orphanet:ORPHA407,SNOMED CT:237939006 Non-ketotic hyperglycinemia germline 3 49419382 GGCCCAGGCCCCACTGCAGCCCAGGTACTACAGGCCGGCGTGGCAGATGACCTGAGGAAAC 397507447 47625 NM_024312.4(GNPTAB):c.1123C>T (p.Arg375Ter) GNPTAB Jun 15, 2017 MedGen:CN239375;MedGen:C2673377,OMIM:252500,Orphanet:ORPHA576 GNPTAB-Related Disorders;I cell disease germline 12 101770182 TTTGTTTGTTGTTGTTAAAAGGATGTTTTTCGAAATTTGAGCCACTTGCCTACCTTTAGTT 875989786 227705 NM_205768.2(ZBTB18):c.1183C>T (p.Gln395Ter) ZBTB18 Oct 04, 2017 MeSH:D030342,MedGen:C0950123;Gene:100190984,MedGen:C2676727,OMIM:612337 Inborn genetic diseases;Mental retardation, autosomal dominant 22 de novo;germline 1 244054957 AACAAGGTCTTCCCCAGCCCCCACATCCTGCAGATCCACCTGAGCACGCACTTCCGCGAGC 371642222 431970 NM_014141.5(CNTNAP2):c.3046C>T (p.Arg1016Ter) CNTNAP2 Sep 07, 2017 MedGen:C2750246 Pitt-Hopkins-like syndrome 1 germline 7 148217323 GGTGCATTTTTTGAAGAAGGGATGTGGCTACGATATAACTTTCAGGCACCAGCAACAAATG 267606854 16862 NM_013296.4(GPSM2):c.379C>T (p.Arg127Ter) GPSM2 Jun 04, 2016 MedGen:CN206424,Orphanet:ORPHA90636;MedGen:C1858695,OMIM:604213,Orphanet:ORPHA314597 Autosomal recessive non-syndromic sensorineural deafness type DFNB;Chudley-McCullough syndrome germline 1 108897592 AATTTTGACGAAGCCATAGTTTGTTGTCAGCGACACCTAGATATTTCCAGAGAGCTTAATG 1057524017 368344 NM_004100.4(EYA4):c.1537C>T (p.Gln513Ter) EYA4 Dec 13, 2016 MedGen:CN517202 not provided germline 6 133515356 CTTGGCCCTGCCAAGAGGGATGCCTGGCTACAGTTAAGGGCAGAGATTGAAGGTCTGACAG 74315414 28454 NM_000311.4(PRNP):c.313C>T (p.Pro105Ser) PRNP Dec 18, 2008 MedGen:C0162534,Orphanet:ORPHA56970;MedGen:C0017495,OMIM:137440,Orphanet:ORPHA356,SNOMED CT:67155006 Genetic prion diseases;Gerstmann-Straussler-Scheinker syndrome germline 20 4699533 ACCCACAGTCAGTGGAACAAGCCGAGTAAGCCAAAAACCAACATGAAGCACATGGCTGGTG -1 485734 NM_001204399.1(PITX2):c.148C>T (p.Gln50Ter) PITX2 Jan 02, 2018 Human Phenotype Ontology:HP:0000558,MedGen:C0265341,SNOMED CT:47507006 Rieger syndrome germline 4 110621268 AGGCGGCAGCGGACTCACTTTACCAGCCAGCAGCTCCAGGAGCTGGAGGCCACTTTCCAGA 61749715 26880 NM_004992.3(MECP2):c.674C>T (p.Pro225Leu) MECP2 Apr 26, 2016 MedGen:C1968550,OMIM:300055;MedGen:C0035372,OMIM:312750,Orphanet:ORPHA778,SNOMED CT:68618008 Mental retardation, X-linked, syndromic 13;Rett syndrome germline;unknown X 154031154 AAAGTCCTGGGAAGCTCCTTGTCAAGATGCCTTTTCAAACTTCGCCAGGGGGCAAGGCTGA 746235533 233887 NM_000051.3(ATM):c.67C>T (p.Arg23Ter) ATM Oct 19, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline 11 108227691 CGTCAACTAGAACATGATAGAGCTACAGAACGAAAGGTAGTAAATTACTTAAATTCAATTT -1 480767 NM_006180.4(NTRK2):c.2159C>T (p.Thr720Ile) NTRK2 Jan 22, 2018 MedGen:C3151303,OMIM:613886 Obesity, hyperphagia, and developmental delay germline 9 84955504 ACTTTGGGATGTCCCGGGACGTGTACAGCACTGACTACTACAGGGTGAGTAGCTGTGCAGA 119103245 17369 NM_033071.3(SYNE1):c.22156C>T (p.Gln7386Ter) SYNE1 Jul 01, 2007 MedGen:C1853116,OMIM:610743,Orphanet:ORPHA88644 Spinocerebellar ataxia, autosomal recessive 8 germline 6 152213737 TCTTTCAGCAAGTTGCAGTCATTTTTGCTACAACATCAGACTTTCTTGGAAAAATGTGAAA 111033739 36560 NM_001258332.1(GALT):c.274C>T (p.Arg92Cys) GALT Feb 14, 2017 MedGen:C0268151,OMIM:230400,Orphanet:ORPHA79239,SNOMED CT:124354006;MedGen:CN169374 Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase;not specified germline 9 34648370 GCCAGCAGTTTCCTGCCAGATATTGCCCAGCGTGAGGAGCGATCTCAGCAGGCCTATAAGA 121912508 29467 NM_000238.3(KCNH2):c.1744C>T (p.Arg582Cys) KCNH2 Jul 31, 2017 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MeSH:D008133,MedGen:C0023976,SNOMED CT:9651007;MedGen:C3150943,OMIM:613688;MedGen:CN517202 Congenital long QT syndrome;Long QT syndrome;Long QT syndrome 2;not provided germline 7 150951649 GGCAACATGGAGCAGCCACACATGGACTCACGCATCGGCTGGCTGCACAACCTGGGCGACC 587784338 169781 NM_003560.3(PLA2G6):c.1754C>T (p.Thr585Ile) PLA2G6 Feb 08, 2013 Human Phenotype Ontology:HP:0012675,MedGen:C4021076 Iron accumulation in brain germline 22 38116200 CTGCCTCATTTCTCTCCAGGGTGATGCTGACAGGGACACTGTCTGACCGGCAGCCGGCTGA 886041581 265172 NM_005120.2(MED12):c.5125C>T (p.Arg1709Ter) MED12 Feb 26, 2016 MedGen:CN517202 not provided germline X 71136380 CCACTCTCTTGGGGCTGGTTTGGAACAGTCCGAGTGGACCGGCGAGTGGCTCGAGGAGAGG 972579811 359220 NM_002016.1(FLG):c.5230C>T (p.Gln1744Ter) FLG Oct 13, 2016 MedGen:CN517202 not provided germline 1 152309656 GTGTCAGCCCACGGACAGGCTGGGCCCCATCAGCAGAGCCACCAAGAGTCCACACGTGGCC 886044718 141316 NM_005676.4(RBM10):c.448C>T (p.Gln150Ter) RBM10 Jan 01, 2014 MedGen:C1839463,OMIM:311900,Orphanet:ORPHA2886 TARP syndrome germline X 47173143 TATCTCCCCGTATAGATCCGTGGCCAGCTGCAGTCGCACGGCGTGCAAGCACGGGAGGTTC 766209297 198430 NM_004572.3(PKP2):c.1162C>T (p.Arg388Trp) PKP2 Jun 18, 2015 MedGen:C0349788,Orphanet:ORPHA247,SNOMED CT:253528005,SNOMED CT:281170005;MedGen:CN517202 Arrhythmogenic right ventricular cardiomyopathy;not provided germline 12 32868935 CAGCACGAGTGCTTCCAGAAATCTGAAGCTCGGAAGAGGGTGAGTGTCATCTTCAGTCCAT 137852452 25339 NM_000132.3(F8):c.5953C>T (p.Arg1985Ter) F8 Apr 01, 1994 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154903951 ATTCATTTCAGTGGACATGTGTTCACTGTACGAAAAAAAGAGGAGTATAAAATGGCACTGT 797045873 208822 NM_001184880.1(PCDH19):c.490C>T (p.Gln164Ter) PCDH19 May 20, 2014 MedGen:C1848137,OMIM:300088,Orphanet:ORPHA101039 Early infantile epileptic encephalopathy 9 germline X 100408108 TACGATCCAGACTCAGGAAGCTTTGGCGTGCAGACTTACGAGCTCACGCCCAACGAGCTGT 111033688 45908 NM_000155.3(GALT):c.394C>T (p.His132Tyr) GALT Dec 04, 2012 MedGen:C0268151,OMIM:230400,Orphanet:ORPHA79239,SNOMED CT:124354006 Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase not provided 9 34647848 CCGTCACCACCCAGTAAGGTCATGTGCTTCCACCCCTGGTCGGATGTAACGCTGCCACTCA 398124247 101367 NM_007171.3(POMT1):c.793C>T (p.Arg265Ter) POMT1 Mar 27, 2017 MedGen:CN033898,OMIM:236670;MedGen:CN517202 Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type a, 1;not provided germline 9 131510287 CAGGTCTGTGTGTTCTGTCACTTGCTCGCCCGAGCAGTGGCTTTGCTGGTCATCCCGGTCG 1057520589 375155 NM_004380.2(CREBBP):c.2659C>T (p.Gln887Ter) CREBBP Apr 02, 2015 MedGen:CN517202 not provided germline 16 3770791 ATGACTCCTCCCCAGCCAGCAGCTCCCACTCAGCCATCAACTCCTGTGTCGTCTTCCGGGC -1 462028 NM_005055.4(RAPSN):c.370C>T (p.Gln124Ter) RAPSN Aug 16, 2016 MedGen:C4225367,OMIM:616326;MedGen:C1276035,OMIM:208150,SNOMED CT:401138005 Myasthenic syndrome, congenital, 11, associated with acetylcholine receptor deficiency;Pena-Shokeir syndrome type I germline 11 47447973 GGTACCAGGGCAGGTGCCCAGCTCGGAGGCCAGGTCAGCCTGAGCATGGGCAATGCCTTCC 869312842 226611 NM_006734.3(HIVEP2):c.2905C>T (p.Gln969Ter) HIVEP2 Jul 20, 2015 MedGen:CN517202 not provided germline 6 142771834 ACAGGCACAGGCCTCTCCCGCAGCCCCAGCCAAGAAAGCAACTTGTCCCACAGCTCCAGTT 1131691733 421682 NM_017780.3(CHD7):c.310C>T (p.Gln104Ter) CHD7 Sep 24, 2015 MedGen:CN517202 not provided germline 8 60741742 CCTGGGAACGGACTCGCGTCTCCGCACTCGCAGTATCACACCCCTCCCGTTCCTCAGGTGC 367543031 51255 NM_000057.3(BLM):c.3847C>T (p.Gln1283Ter) BLM Feb 06, 2017 MedGen:C0005859,OMIM:210900,Orphanet:ORPHA125,SNOMED CT:4434006 Bloom syndrome germline 15 90809232 AAATATGGTGCGGAAGTGATTTCAGTATTACAGAAATACTCTGAATGGACATCGCCAGGTT 267606735 21087 NM_004273.4(CHST3):c.422C>T (p.Thr141Met) CHST3 Apr 01, 2009 MedGen:C1840471,OMIM:143095 Spondyloepiphyseal dysplasia with congenital joint dislocations germline 10 72007453 CCCGGCGCCACGTGCTGCTCATGGCCACCACGCGCACCGGCTCCTCGTTCGTGGGCGAGTT 28942108 18015 NM_000271.4(NPC1):c.2932C>T (p.Arg978Cys) NPC1 Jun 13, 2016 MedGen:C3179455,OMIM:257220;MedGen:CN517202 Niemann-Pick disease type C1;not provided germline;unknown 18 23538651 TCTCCGCCAGTGGTTGACCCTGCCTGCGTTCGCTGCAGGCCTCTGACTCCGGAAGGCAAAC 867410737 446893 NM_001687.4(ATP5F1D):c.245C>T (p.Pro82Leu) ATP5F1D Jun 01, 2017 Human Phenotype Ontology:HP:0011925,MedGen:C4020737 Decreased activity of mitochondrial ATP synthase complex inherited 19 1242559 CCCACGTGCCCACGCTGCAGGTCCTGCGGCCGGGGCTGGTCGTGGTGCATGCAGAGGACGG 780320724 413171 NM_001110219.2(GJB6):c.119C>T (p.Ala40Val) GJB6 Dec 22, 2016 MedGen:C2675237,OMIM:612643 Deafness, autosomal dominant 3b germline 13 20223362 TTTTCCGAGTCATGATCCTCGTGGTGGCTGCCCAGGAAGTGTGGGGTGACGAGCAAGAGGA 143492730 226292 NM_212552.2(BOLA3):c.136C>T (p.Arg46Ter) BOLA3 Dec 22, 2017 MedGen:C3280378,OMIM:614299,Orphanet:ORPHA401874 Multiple mitochondrial dysfunctions syndrome 2 germline 2 74145222 GTGACCCAAATTCTCAAAGAAAAGTTTCCACGAGCTACAGCTATAAAAGTCACTGACATTT -1 425905 NM_001197104.1(KMT2A):c.3190C>T (p.Arg1064Ter) KMT2A Jun 08, 2017 MedGen:CN517202 not provided germline 11 118476838 CAAGAAAGTGACTCATCAGAGACCTCTGTGCGAGGACCCCGGATTAAACATGTCTGCAGAA 119462981 18278 NM_007171.3(POMT1):c.907C>T (p.Gln303Ter) POMT1 Nov 01, 2002 MedGen:CN033898,OMIM:236670 Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type a, 1 germline 9 131510401 CCCCACGACCAAATCATGTCCAGTGCCTTCCAGGCCAGCTTAGAGGTAAGTAAGCAGTGGG 137854453 31762 NM_000501.3(ELN):c.1621C>T (p.Arg541Ter) ELN Sep 01, 2017 Human Phenotype Ontology:HP:0004381,MedGen:C0003499,OMIM:185500,Orphanet:ORPHA3193,SNOMED CT:268185002;MedGen:CN517202 Supravalvar aortic stenosis;not provided germline 7 74060184 GCTGCCAAGGTGGCTGCCAAAGCCCAGCTCCGTGAGTGCCTCGCCCACCTTTCTCTCCTCT 779803851 259752 NM_001041.3(SI):c.5110C>T (p.Arg1704Ter) SI Jun 16, 2016 MedGen:CN517202 not provided germline 3 164987225 GGGTAAAATTATATATTTCTTTCTTATAGTCGACAAAAACACATGAAGCTCATTGTTGCTG 869312903 226714 NM_001135599.2(TGFB2):c.988C>T (p.Arg330Cys) TGFB2 Oct 27, 2016 MedGen:C3553762,OMIM:614816;MedGen:CN517202 Loeys-Dietz syndrome 4;not provided de novo;germline 1 218436119 GAGTCACAACAGACCAACCGGCGGAAGAAGCGTGCTTTGGATGCGGCCTATTGCTTTAGGT 529008617 152318 NM_001128425.1(MUTYH):c.1214C>T (p.Pro405Leu) MUTYH Jun 22, 2017 MedGen:C0699790,OMIM:114500,SNOMED CT:269533000;MedGen:C0027672,SNOMED CT:699346009;MedGen:C1837991,OMIM:608456,Orphanet:ORPHA247798;MedGen:CN517202 Carcinoma of colon;Hereditary cancer-predisposing syndrome;MYH-associated polyposis;not provided germline;unknown 1 45331529 CAGGTCTGCTGGCAGGACTGTGGGAGTTCCCGTCCGTGACCTGGGAGCCCTCAGAGCAGCT 786201801 182404 NM_000038.5(APC):c.4621C>T (p.Gln1541Ter) APC Jul 12, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 5 112840215 AATGACAATGGGAATGAAACAGAATCAGAGCAGCCTAAAGAATCAAATGAAAACCAAGAGA 587783682 168926 NM_003482.3(KMT2D):c.11290C>T (p.Gln3764Ter) KMT2D Feb 08, 2013 MedGen:CN030661,OMIM:147920 Kabuki syndrome 1 germline 12 49033415 CAGCAGCAACAGCAGCAGGGTCCTGGAGTACAGACAAACCAAGCTCTGGGTCCCAAGCCCC 587777178 106801 NM_006767.3(LZTR1):c.2062C>T (p.Arg688Cys) LZTR1 Mar 04, 2014 MedGen:C3810283,OMIM:615670 Schwannomatosis 2 unknown 22 20995865 CGGCCAGCCCACAAGGCTATCCTGGCCGCCCGCTCCAGGTGGGTGGGGGCTGGACAGGAGG 368313959 362591 NM_016023.3(OTUD6B):c.433C>T (p.Arg145Ter) OTUD6B Jan 22, 2018 MedGen:CN235126;MedGen:CN243958,OMIM:617452;Human Phenotype Ontology:HP:0001249,MedGen:C1843367;MedGen:C0014544,Orphanet:ORPHA166463;MedGen:CN517202 Dysmorphic features;Intellectual developmental disorder with dysmorphic facies, seizures, and distal limb anomalies;Intellectual disability;Seizure Disorders;not provided germline 8 91078383 TAGGAAAAGAAAGCTGCATTGGAAAAGGAGCGAGAAGAACGGATAGCTGAAGCTGAAATTG 387906606 38593 NM_000093.4(COL5A1):c.3184C>T (p.Arg1062Ter) COL5A1 Mar 27, 2017 MedGen:C0268335,OMIM:130000,Orphanet:ORPHA287,SNOMED CT:20766005,SNOMED CT:83470009;MedGen:CN517202 Ehlers-Danlos syndrome, classic type;not provided germline 9 134805044 CCTCCAGGATTACGTGGTTTCCCTGGGGACCGAGGGCTTCCTGGTCCAGTGGTGAGTGAGA 104894793 26529 NM_006579.2(EBP):c.523C>T (p.Gln175Ter) EBP Oct 02, 2000 MedGen:C0282102,OMIM:302960,Orphanet:ORPHA35173 Chondrodysplasia punctata 2 X-linked dominant germline X 48528287 TACTTCCTGACAGAGCACCGCGACGGATTCCAGCACGGAGAGCTGGGCCACCCTCTCTACT 765432081 421907 NM_000545.6(HNF1A):c.475C>T (p.Arg159Trp) HNF1A Sep 29, 2015 MedGen:CN517202 not provided germline 12 120988981 AACAAGGGCACTCCCATGAAGACGCAGAAGCGGGCCGCCCTGTACACCTGGTACGTCCGCA 878854957 261597 NM_007294.3(BRCA1):c.5161C>T (p.Gln1721Ter) BRCA1 Dec 20, 2016 MedGen:C2676676,OMIM:604370;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 1;Hereditary cancer-predisposing syndrome germline 17 43063365 GTCTTTTCTATGATCTCTTTAGGGGTGACCCAGTCTATTAAAGAAAGAAAAATGCTGAATG 25403 51465 NM_000138.4(FBN1):c.184C>T (p.Arg62Cys) FBN1 Jan 14, 2016 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:CN517202 Marfan syndrome;not provided germline 15 48613073 TTTTGTTTTAGACCCAATGTCTGTGGATCACGTTATAATGCTTACTGTTGCCCTGGATGGA 119488099 20477 NM_005097.3(LGI1):c.406C>T (p.Arg136Trp) LGI1 Jan 12, 2015 MedGen:C1838062,OMIM:600512,Orphanet:ORPHA101046;MedGen:CN517202 Epilepsy, lateral temporal lobe, autosomal dominant;not provided germline 10 93777592 AACATCAAGTCAATTTCAAGACATACTTTCCGGGGACTAAAGTCATTAATTCACTTGTAAG 748459670 194664 NM_001844.4(COL2A1):c.3106C>T (p.Arg1036Ter) COL2A1 Oct 03, 2017 MedGen:C2020284,OMIM:108300;MedGen:CN517202 Stickler syndrome type 1;not provided germline 12 47978015 GGCCTGACGGGTCCTGCAGGTGAACCTGGACGAGAGGTGAGCAGTGAGACCCCCTGGGGTG 886041037 199915 NM_000417.2(IL2RA):c.301C>T (p.Gln101Ter) IL2RA Feb 01, 2007 MedGen:C1853392,OMIM:606367,Orphanet:ORPHA169100 Interleukin 2 receptor, alpha, deficiency of germline 10 6024310 ACGAAACAAGTGACACCTCAACCTGAAGAACAGAAAGAAAGGAAAACCACAGAAATGCAAA 781939614 446881 NM_003846.2(PEX11B):c.277C>T (p.Arg93Ter) PEX11B Jun 26, 2016 MedGen:C3554055,OMIM:614920 Peroxisome biogenesis disorder 14B de novo 1 145916914 AGATTCTGCATCACTGTTAGTCACCTCAATCGAGCCTTGTACTTCGCCTGTGACAATGTCC 121912951 32167 NM_080680.2(COL11A2):c.3991C>T (p.Arg1331Ter) COL11A2 Jan 01, 2005 MedGen:C0432210,OMIM:215150,SNOMED CT:254060000 Otospondylomegaepiphyseal dysplasia germline 6 33167822 GGTCCTGCTGGCTCGCCTGGTTCCGAGGGGCGACAAGGAGGGAAGGGAGCCAAGGTGAGGG 80100937 17889 NM_020184.3(CNNM4):c.1690C>T (p.Gln564Ter) CNNM4 Feb 01, 2009 MedGen:C1857588,OMIM:217080,Orphanet:ORPHA1021 Cone-rod dystrophy amelogenesis imperfecta germline 2 96799065 TCTCTTCTCTCTCCTCCTACAGAGGTCTCTCAGTTTAGCCCCTCCCTGATATCAGAGAAGA 62638214 20879 NM_000843.3(GRM6):c.1861C>T (p.Arg621Ter) GRM6 Mar 29, 2005 MedGen:C1850362,OMIM:257270;MedGen:CN517202 Congenital stationary night blindness, type 1B;not provided germline 5 178986393 AACAACACGCCCATCGTCCGGGCCTCGGGCCGAGAGCTCAGCTACGTCCTCCTCACCGGCA -1 471986 NM_005198.4(CHKB):c.400C>T (p.Gln134Ter) CHKB Feb 16, 2017 MedGen:C1865233,OMIM:602541,Orphanet:ORPHA280671 Muscular dystrophy, congenital, megaconial type germline 22 50581796 GCCATACTTGCGGAGCGGTCGCTGGGGCCCCAGCTGTACGGAGTCTTCCCAGAGGGCCGGC 886043792 272277 NM_000263.3(NAGLU):c.694C>T (p.Gln232Ter) NAGLU Jun 04, 2016 MedGen:C0086648,OMIM:252920,Orphanet:ORPHA79270,SNOMED CT:59990008 Mucopolysaccharidosis, MPS-III-B germline 17 42538685 CTTCTGTTCCTCCAGCACCGGGTCCTGGACCAGATGCGCTCCTTCGGCATGACCCCAGTGC 104894069 16218 NM_000497.3(CYP11B1):c.124C>T (p.Pro42Ser) CYP11B1 Oct 02, 2015 Human Phenotype Ontology:HP:0008258,MedGen:C0001627,Orphanet:ORPHA418,SNOMED CT:237751000;MedGen:C0268292,OMIM:202010,Orphanet:ORPHA90795,SNOMED CT:124214007 Congenital adrenal hyperplasia;Deficiency of steroid 11-beta-monooxygenase germline 8 142879690 CCCAGGACAGTGCTGCCCTTTGAAGCCATGCCCCGGCGTCCAGGCAACAGGTGGCTGAGGC 121909668 31263 NM_004960.3(FUS):c.1561C>T (p.Arg521Cys) FUS Aug 31, 2010 MedGen:C1842675,OMIM:608030 Amyotrophic lateral sclerosis type 6 germline 16 31191418 TTTTTTTGCAGGGGTGAGCACAGACAGGATCGCAGGGAGAGGCCGTATTAATTAGCCTGGC 886039560 260334 NM_005183.3(CACNA1F):c.148C>T (p.Arg50Ter) CACNA1F Feb 16, 2016 MedGen:CN517202 not provided germline X 49231805 AGTGGGGCATCAGGCCTAGGGACCCCTAAGCGAAGAAACCAGCACAGCAAGCACAAGACAG 118203955 16239 NM_020381.3(PDSS2):c.964C>T (p.Gln322Ter) PDSS2 Jun 07, 2016 MedGen:C3553358,OMIM:614652 Coenzyme Q10 deficiency, primary, 3 germline 6 107210483 AATCTAAACTCAGCTCCTGTAGTCTTACATCAGGAATTTCTTGGAAGAGATTTGTGGATTA 1057518410 359539 NM_014159.6(SETD2):c.4774C>T (p.Arg1592Ter) SETD2 Dec 05, 2016 MedGen:CN517202 not provided germline 3 47106062 GAGGTACTCGATCATAAAGAGTTTAAAGCTCGAGTGAAGGAGTATGCACGAAACAAAAACA 72552735 21458 NM_003060.3(SLC22A5):c.1433C>T (p.Pro478Leu) SLC22A5 Dec 04, 2012 MedGen:C0342788,OMIM:212140,Orphanet:ORPHA158,SNOMED CT:21764004 Renal carnitine transport defect germline 5 132392598 CAGCATCCCGCCTGGGCAGCATCCTGTCTCCCTACTTCGTTTACCTTGGTAAGTCCCATGA 80356544 19665 NM_021830.4(TWNK):c.1370C>T (p.Thr457Ile) TWNK Jul 22, 2010 MedGen:C1849096,OMIM:271245,Orphanet:ORPHA1186;MedGen:C3151513,OMIM:251880,Orphanet:ORPHA279934 Mitochondrial DNA depletion syndrome 7 (hepatocerebral type);Mitochondrial DNA-depletion syndrome 3, hepatocerebral germline 10 100989770 GCAATGTGAGACTAGCCCGGGTCATGCTGACACAGTTTGCCGAGGGGCGGCTGGAAGATCA 794727208 192022 NM_007171.3(POMT1):c.1864C>T (p.Arg622Ter) POMT1 Feb 09, 2015 MedGen:C1836373,OMIM:609308,Orphanet:ORPHA86812;MedGen:CN033898,OMIM:236670 Limb-girdle muscular dystrophy-dystroglycanopathy, type C1;Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type a, 1 germline 9 131521445 CTGCTGTCCTTGTGGTACCTGCTCCGACGGCGAAGAAATGTCCATGACCTCCCTCAGGGTT 397515485 77869 NM_005334.2(HCFC1):c.344C>T (p.Ala115Val) HCFC1 Sep 05, 2013 MedGen:C0796208,OMIM:309541,Orphanet:ORPHA369962 Mental retardation 3, X-linked germline X 153964283 GGTTCAGTCTCCAGGTCTTGATTTTGCAGGCGAGCCGGTGGGAGTGGAAGAGACTCAAAGC 387906964 39603 NM_024513.3(FYCO1):c.2206C>T (p.Gln736Ter) FYCO1 Jun 10, 2011 MedGen:C1864908,OMIM:610019 Cataract, autosomal recessive congenital 2 germline 3 45967128 CGGCACAGAGAGCTTAGGGCTCTCGAGAGCCAGTGCCAGCAGCAGACCCAGCTGATTGAGG 119477053 19724 NM_033305.2(VPS13A):c.622C>T (p.Arg208Ter) VPS13A Nov 01, 2002 MedGen:C0393576,OMIM:200150,Orphanet:ORPHA2388 Choreoacanthocytosis germline 9 77213240 ACATCTAATAAATTTTATTTTCAGTTAATCCGATTGGATAACCTGTTTGCCTATTGGAATG 886039388 259649 NM_006147.3(IRF6):c.226C>T (p.Pro76Ser) IRF6 Aug 27, 2015 MedGen:CN517202 not provided germline 1 209796501 AAGTACCAGGAAGGGGTGGATGACCCTGACCCAGCTAAATGGAAGGCCCAGCTGCGCTGTG 137852996 20001 NM_018136.4(ASPM):c.349C>T (p.Arg117Ter) ASPM Sep 01, 2009 MedGen:C1837501,OMIM:608716 Primary autosomal recessive microcephaly 5 germline 1 197144049 TCTGTTAACTGGACACCACTCAAAGAAGGCCGAGTAAGAGAGATTATGACATTTCTTGTAA 281875333 38554 NM_001101.4(ACTB):c.586C>T (p.Arg196Cys) ACTB Apr 03, 2017 MedGen:C1855722,OMIM:243310,OMIM:608578,Orphanet:ORPHA2995;MedGen:CN517202 Baraitser-Winter syndrome 1;not provided germline 7 5528497 ACTGACTACCTCATGAAGATCCTCACCGAGCGCGGCTACAGCTTCACCACCACGGCCGAGC 121912504 29459 NM_000238.3(KCNH2):c.1682C>T (p.Ala561Val) KCNH2 Jun 30, 2017 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MeSH:D008133,MedGen:C0023976,SNOMED CT:9651007;MedGen:C3150943,OMIM:613688;MedGen:CN517202 Congenital long QT syndrome;Long QT syndrome;Long QT syndrome 2;not provided germline 7 150951711 TCTTGCTCATGTGCACCTTTGCGCTCATCGCGCACTGGCTAGCCTGCATCTGGTACGCCAT 104894659 18298 NM_000529.2(MC2R):c.601C>T (p.Arg201Ter) MC2R Jul 01, 1994 MedGen:C4049650,OMIM:202200 ACTH resistance germline 18 13884918 TGCCTCTATGTGCACATGTTCCTGCTGGCTCGATCCCACACCAGGAAGATCTCCACCCTCC -1 481803 NM_000127.2(EXT1):c.913C>T (p.Gln305Ter) EXT1 Mar 22, 2017 MedGen:CN517202 not provided germline 8 118110134 CTCACCACCTGCAAGCATGGCAAAGACTGGCAAAAGCACAAGGATTCTCGCTGTGACAGAG 200427211 415785 NM_001193416.2(DDX3X):c.1493C>T (p.Thr498Ile) DDX3X May 15, 2017 MedGen:CN517202 not provided germline X 41346406 GCTCAGGAAAAAGCCCAATTTTAGTGGCTACAGCAGTATGTATAAACATCTTTCTTTTATT 119103229 16948 NM_000411.6(HLCS):c.1522C>T (p.Arg508Trp) HLCS Nov 01, 2001 MedGen:C0268581,OMIM:253270,Orphanet:ORPHA79242 Holocarboxylase synthetase deficiency germline 21 36765170 ATGTTTCCCACTGTGGCCTGTGTTCCAGGACGGGGAGGGAATGTGTGGCTGAGCCCTGTGG 886041918 264720 NM_015295.2(SMCHD1):c.1030C>T (p.Arg344Ter) SMCHD1 Aug 12, 2016 MedGen:CN517202 not provided germline 18 2694683 TACTTGAAAAATTATTTCCACCTTTGGACACGACAGTTAGCGTAAGTAATTATATTTGGCT 1057524248 378303 NM_001039590.2(USP9X):c.643C>T (p.Arg215Ter) USP9X Jan 04, 2017 MedGen:CN517202 not provided germline X 41137011 GATGAACTCTTTGCTCGTTCTCCAGATCCTCGATCACCAAAGGTGTGTTGGTTTGTTATTT 879255584 205713 NM_001830.3(CLCN4):c.2152C>T (p.Arg718Trp) CLCN4 Mar 22, 2016 MedGen:CN232948 CLCN4-related disorder de novo X 10220837 ACTCCGATGGAAACGGTGGTGGATATCTTCCGGAAACTGGGGCTTCGGCAGTGCCTGGTGA 1060499974 398266 NM_130799.2(MEN1):c.1243C>T (p.Arg415Ter) MEN1 Mar 15, 2017 MedGen:C0027672,SNOMED CT:699346009;MeSH:D018761,MedGen:C0025267,OMIM:131100,Orphanet:ORPHA652,SNOMED CT:30664006;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Multiple endocrine neoplasia, type 1;not provided germline 11 64805141 CAGGACCCTGAGTGCTTCGCCCACCTGCTGCGATTCTACGACGGCATCTGCAAATGGGAGG 121434410 21385 NM_003690.4(PRKRA):c.665C>T (p.Pro222Leu) PRKRA Oct 01, 2014 MedGen:C2677567,OMIM:612067,Orphanet:ORPHA210571 Dystonia 16 germline 2 178436264 GATGTACTTGGCATTCCTTGAGGAATTCTCCTGGTGAAAAGATCAACTTACTGAAAAGAAG 33941377 44951 NM_000518.4(HBB):c.-137C>T HBB May 14, 2015 MedGen:C0472767,Orphanet:ORPHA231222,SNOMED CT:191189009;MedGen:C0005283,OMIM:613985,Orphanet:ORPHA848,SNOMED CT:65959000 Beta thalassemia intermedia;beta Thalassemia germline 11 5227158 TCACTTAGACCTCACCCTGTGGAGCCACACCCTAGGGTTGGCCAATCTACTCCCAGGAGCA 137854855 132465 NM_000428.2(LTBP2):c.1642C>T (p.Arg548Ter) LTBP2 - MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006 Marfan syndrome not provided 14 74551108 CGGCCACTGCCCCCAGCAGCACCCAGGCCTCGAGGACTGCTGGGCCGGTGTTACCTGAACA 150974575 173633 NM_001927.3(DES):c.1285C>T (p.Arg429Ter) DES Aug 04, 2016 Human Phenotype Ontology:HP:0003715,MedGen:C2678065,Orphanet:ORPHA593,SNOMED CT:699269005;MedGen:C1832370,OMIM:601419,Orphanet:ORPHA98909 Myofibrillar myopathy;Myofibrillar myopathy 1 germline 2 219423817 CCCATCCAGACCTACTCTGCCCTCAACTTCCGAGGTGAGTGTCTGCTGGCAGGCGGAGGCT 587777146 106547 NM_024790.6(CSPP1):c.652C>T (p.Gln218Ter) CSPP1 Feb 17, 2014 MedGen:C3810212,OMIM:615636 Joubert syndrome 21 germline 8 67095434 CCTTCAGAGGCATATGAAGAACTTCTGAACCAAAGACGACTAGAGGAGGACAGATACCGAC 141178995 172094 NM_002335.3(LRP5):c.3562C>T (p.Arg1188Trp) LRP5 Feb 21, 2018 Human Phenotype Ontology:HP:0006557,MedGen:C0158683,OMIM:174050,SNOMED CT:72925005;MedGen:CN818987,OMIM:617875 Congenital cystic disease of liver;POLYCYSTIC LIVER DISEASE 4 WITH OR WITHOUT KIDNEY CYSTS germline 11 68426112 GAGCGTGTGGAGAAGACCACCGGGGACAAGCGGACTCGCATCCAGGGCCGTGTCGCCCACC 397515486 77870 NM_005334.2(HCFC1):c.218C>T (p.Ala73Val) HCFC1 Dec 23, 2015 Human Phenotype Ontology:HP:0001249,MedGen:C1843367;MedGen:C0796208,OMIM:309541,Orphanet:ORPHA369962;MedGen:CN517202 Intellectual disability;Mental retardation 3, X-linked;not provided germline;maternal X 153964702 CCCCAGCAACCAACCAGTGGTTCATCCCAGCCGTGAGGGGGGACATTCCCCCTGGGTGTGC 730881411 179970 NM_000465.3(BARD1):c.448C>T (p.Arg150Ter) BARD1 Sep 08, 2017 MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Familial cancer of breast;Hereditary cancer-predisposing syndrome;not provided germline 2 214781426 AAGAATTCAATTAAAATGTGGTTTAGCCCTCGAAGTAAGAAAGTCAGATATGTTGTGAGTA 527236137 152890 NM_206933.2(USH2A):c.13010C>T (p.Thr4337Met) USH2A May 14, 2015 MedGen:C1848634,OMIM:276901 Usher syndrome, type 2A germline 1 215674901 CCACCTATAGCTATGCACTCCAAGCCTGCACGAGTGGAGGATGCTCCACCAGCAAACCCAC 121909490 22045 NM_002316.3(LMX1B):c.691C>T (p.Arg231Ter) LMX1B Nov 29, 2016 MedGen:C0027341,OMIM:161200,SNOMED CT:22199006;MedGen:CN517202 Nail-patella syndrome;not provided germline 9 126693273 CGACCCCGGACCATCCTCACCACGCAGCAGCGAAGAGCCTTCAAGGCCTCCTTCGAGGTCT 397507395 46684 NM_000059.3(BRCA2):c.7963C>T (p.Gln2655Ter) BRCA2 Sep 08, 2016 MedGen:C2675520,OMIM:612555 Breast-ovarian cancer, familial 2 germline 13 32362680 AGATGCCTAAGCCCAGAAAGGGTGCTTCTTCAACTAAAATACAGGCAAGTTTAAAGCATTA 121912553 29876 NM_000883.3(IMPDH1):c.568C>T (p.Arg190Trp) IMPDH1 Jan 01, 2006 MedGen:C1840284,OMIM:613837 Leber congenital amaurosis 11 germline 7 128400828 TGCACCCCAGAGTTCCAGGCCAACGAGGTGCGGAAGGTCAAGGCAAGTACCAGGCCTGTCC 1135401825 424694 NM_001304815.1(CIC):c.5701C>T (p.Gln1901Ter) CIC Aug 02, 2017 MedGen:CN368509,OMIM:617600 MENTAL RETARDATION, AUTOSOMAL DOMINANT 45 germline 19 42292173 AGCCCAGCCACACTCCCTGGACCCACCTCTCAGCCTCAGAAGGTCCTGTTGCCCTCCTCCA 121918609 27987 NM_003035.2(STIL):c.3715C>T (p.Gln1239Ter) STIL Sep 01, 2009 MedGen:C2675187,OMIM:612703 Primary autosomal recessive microcephaly 7 germline 1 47251285 AACCTTCGAACCGGGAAAGCAGAGTTCACTCAACATCCTGAGAAAGAAAATGAAGGGGACA 1057519573 362378 NM_032578.3(MYPN):c.3214C>T (p.Arg1072Ter) MYPN Feb 08, 2017 MedGen:CN240509,OMIM:617336 Nemaline myopathy 11, autosomal recessive germline 10 68197407 GACAAAGAGCCCCTACAGGAACGCTTTTTCCGACCACATTTCCTGCAGGCTCCTGGGGATA 80359058 67179 NM_000059.3(BRCA2):c.8140C>T (p.Gln2714Ter) BRCA2 Sep 08, 2016 MedGen:C2675520,OMIM:612555 Breast-ovarian cancer, familial 2 germline 13 32363342 TCTAGCAATAAAACTAGTAGTGCAGATACCCAAAAAGTGGCCATTATTGAACTTACAGATG 387906913 39443 NM_014339.6(IL17RA):c.850C>T (p.Gln284Ter) IL17RA Apr 01, 2011 MedGen:C3151402,OMIM:613953 Immunodeficiency 51 germline 22 17104729 CCCTTTTCCTGCCCTCTCTGCCCGCAGATCCAGCCCTTCTTCAGCAGCTGCCTCAATGACT 61750074 106210 NM_000552.4(VWF):c.4135C>T (p.Arg1379Cys) VWF Dec 08, 2016 MedGen:CN517202 not provided germline 12 6019283 TTCAGCAAGATCGACCGCCCTGAAGCCTCCCGCATCACCCTGCTCCTGATGGCCAGCCAGG 587778835 132307 NM_000321.2(RB1):c.2197C>T (p.His733Tyr) RB1 Sep 16, 2013 Human Phenotype Ontology:HP:0009919,MeSH:D012175,MedGen:C0035335,OMIM:180200,Orphanet:ORPHA790 Retinoblastoma somatic 13 48463821 ATCATTGTAACAGCATACAAGGATCTTCCTCATGCTGTTCAGGAGGTAGGTAATTTTCCAT 387906818 39169 NM_005257.5(GATA6):c.1366C>T (p.Arg456Cys) GATA6 Mar 01, 2014 Human Phenotype Ontology:HP:0030680,MedGen:C4049796;Human Phenotype Ontology:HP:0000776,MedGen:C0235833,Orphanet:ORPHA2140;MedGen:C1838780,OMIM:600001 Abnormality of cardiovascular system morphology;Congenital diaphragmatic hernia;Pancreatic agenesis and congenital heart disease de novo;germline 18 22181516 AACTGTCACACCACAACTACCACCTTATGGCGCAGAAACGCCGAGGGTGAACCCGTGTGCA 121912304 26630 NM_001363.4(DKC1):c.146C>T (p.Thr49Met) DKC1 Apr 27, 2015 MedGen:C1148551,OMIM:305000;MedGen:CN517202 Dyskeratosis congenita X-linked;not provided germline X 154765505 AACCTGAATCCAAAGTTGCTAAGTTGGACACGTCTCAGTGGCCCCTTTTGCTAAAGGTATG 121918278 17224 NM_022370.3(ROBO3):c.2317C>T (p.Gln773Ter) ROBO3 Mar 01, 2006 MedGen:C1846496,OMIM:607313,Orphanet:ORPHA2744 Gaze palsy, familial horizontal, with progressive scoliosis germline 11 124875581 CACCCTGGCCCAGCCCCCAGTGGCCCCCCACAGGGAGTGGCGGTGGCCTTGGGGGGTGATG 111033451 53895 NM_004004.5(GJB2):c.19C>T (p.Gln7Ter) GJB2 Feb 11, 2016 MedGen:C2673759,OMIM:220290;MedGen:CN043648,Orphanet:ORPHA87884 Deafness, autosomal recessive 1A;Nonsyndromic hearing loss and deafness germline;unknown 13 20189563 CCAGAGTAGAAGATGGATTGGGGCACGCTGCAGACGATCCTGGGGGGTGTGAACAAACACT -1 426490 NM_001145408.1(NONO):c.217C>T (p.Arg73Ter) NONO May 17, 2017 MedGen:CN517202 not provided germline X 71291841 AGAAAACCAGGAGAGAAGACCTTCACCCAACGAAGCCGTCTTTTTGTGGGAAATCTTCCTC 387906854 39268 NM_005902.3(SMAD3):c.335C>T (p.Ala112Val) SMAD3 Sep 02, 2011 MedGen:C3151087,OMIM:613795,Orphanet:ORPHA284984 Loeys-Dietz syndrome 3 germline 15 67165023 AGCTACGGGCCATGGAGCTGTGTGAGTTCGCCTTCAATATGAAGAAGGACGAGGTCTGCGT 587783457 168636 NM_017780.3(CHD7):c.7891C>T (p.Arg2631Ter) CHD7 Apr 04, 2017 MedGen:C0265354,OMIM:214800,Orphanet:ORPHA138,SNOMED CT:47535005;MedGen:CN517202 CHARGE association;not provided germline 8 60862256 CAGAAACCGAAACAGAAACGACATAGATGTCGAAACCCTAATAAATTGGATATAAACACTT 756854513 269221 NM_000426.3(LAMA2):c.4048C>T (p.Arg1350Ter) LAMA2 Nov 20, 2015 MedGen:C1263858,OMIM:607855,Orphanet:ORPHA258,SNOMED CT:111503008 Merosin deficient congenital muscular dystrophy germline 6 129316161 CTTATCAAAGCTACTTATGGAAATTTCATGCGACAAAGCAGGTAAACTCTAATAGAAAATA 281874682 47364 NM_000495.4(COL4A5):c.1883C>T (p.Pro628Leu) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108598805 GGCCTATGGGTCCCCCTGGTTTCGGCCCTCCAGGCCCAGTAGGTGAAAAAGGCATACAAGG 1064796882 411485 NM_001008537.2(NEXMIF):c.766C>T (p.Gln256Ter) NEXMIF Mar 16, 2017 MedGen:CN517202 not provided germline X 74743791 ACAGAAGAAGCTTTGCTTGCAAATTCCAATCAGGATTGGGGTTACTTCGAGACTTTTATTA 74315521 22442 NM_006941.3(SOX10):c.748C>T (p.Gln250Ter) SOX10 Dec 01, 2002 MedGen:C1836727,OMIM:609136,Orphanet:ORPHA163746 Peripheral demyelinating neuropathy, central dysmyelination, Waardenburg syndrome, and Hirschsprung disease germline 22 37974148 ACCCCTCCAACCACCCCGAAGACAGAGCTGCAGTCGGGCAAGGCAGACCCGAAGCGGGACG -1 482160 NM_005993.4(TBCD):c.988C>T (p.Gln330Ter) TBCD Nov 21, 2017 MedGen:CN517202 not provided germline 17 82805912 CGTGGCTGCCGATCTTTGGCTGCAAATCTGCAGCTCCTCACTCAGGGTCAGAGTGAGCAGA 727505104 176706 NM_144612.6(LOXHD1):c.3169C>T (p.Arg1057Ter) LOXHD1 May 15, 2014 MedGen:CN043648,Orphanet:ORPHA87884 Nonsyndromic hearing loss and deafness germline 18 46559495 TACGGCGAGGAGTATGGAGACACGGGCGAACGACCCCTGAAGAAGTCAGACAAGTCCAACA 104894952 24961 NM_003336.3(UBE2A):c.382C>T (p.Gln128Ter) UBE2A Sep 01, 2006 MedGen:C3275464,OMIM:300860,Orphanet:ORPHA163956 Syndromic mental retardation, Nascimento type, X-linked germline X 119583178 CCCAATAGTCCAGCAAACAGCCAGGCTGCTCAGCTGTACCAGGAGAACAAACGGGAATATG 762771340 420434 NM_014804.2(KIAA0753):c.943C>T (p.Gln315Ter) KIAA0753 Jun 21, 2017 MedGen:C0265275,Orphanet:ORPHA474,SNOMED CT:75049004;Human Phenotype Ontology:HP:0002335,MedGen:C0431399,Orphanet:ORPHA475,SNOMED CT:253175003,SNOMED CT:716997004 Jeune thoracic dystrophy;Joubert syndrome inherited;not applicable 17 6623043 GCTGCCCATCGAGGAGCCATTCGGGCCTTACAGATGTTTGTCACTCAGTTTACTGACCGAG 121909765 21828 NM_001360.2(DHCR7):c.866C>T (p.Thr289Ile) DHCR7 May 02, 2016 MedGen:C0175694,OMIM:270400,Orphanet:ORPHA818,SNOMED CT:43929004;MedGen:CN517202 Smith-Lemli-Opitz syndrome;not provided germline;unknown 11 71437909 TCTACGTGATTGACTTCTTCTGGAACGAAACCTGGTACCTGAAGACCATTGACATCTGCCA 863224471 213502 NM_000166.5(GJB1):c.547C>T (p.Arg183Cys) GJB1 Mar 28, 2017 MedGen:CN118851;MedGen:CN517202 Charcot-Marie-Tooth Neuropathy X;not provided germline X 71224254 TGCCCCAACACAGTGGACTGCTTCGTGTCCCGCCCCACCGAGAAAACCGTCTTCACCGTCT 63751099 96530 NM_000251.2(MSH2):c.28C>T (p.Gln10Ter) MSH2 Sep 05, 2013 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Lynch syndrome germline 2 47403219 GACATGGCGGTGCAGCCGAAGGAGACGCTGCAGTTGGAGAGCGCGGCCGAGGTCGGCTTCG 267608493 153555 NM_003159.2(CDKL5):c.532C>T (p.Arg178Trp) CDKL5 May 16, 2017 MedGen:CN128785;MedGen:C2748910,Orphanet:ORPHA3095;MedGen:C1839333,OMIM:300672;MedGen:C1839333,OMIM:300672;MedGen:CN517202 Angelman syndrome-like;Atypical Rett syndrome;Early infantile epileptic encephalopathy 2;Early infantile epileptic encephalopathy 2;not provided de novo;germline;unknown X 18584331 TACACAGAGTACGTTGCCACCAGATGGTATCGGTCCCCAGAACTCTTACTTGGGTGAGTTA 398124074 100710 NM_004006.2(DMD):c.8608C>T (p.Arg2870Ter) DMD Mar 16, 2017 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009;MedGen:C3668940,OMIM:302045;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Becker muscular dystrophy;Dilated cardiomyopathy 3B;Duchenne muscular dystrophy germline X 31479043 CCTGTAATCATGAGTACTCTTGAGACTGTACGAATATTTCTGACAGAGCAGCCTTTGGAAG 886039539 260225 NM_000214.2(JAG1):c.148C>T (p.Gln50Ter) JAG1 Jan 04, 2017 MedGen:CN517202 not provided germline 20 10672940 CTGTCCATGCAGAACGTGAACGGGGAGCTGCAGAACGGGAACTGCTGCGGCGGCGCCCGGA -1 446041 NM_001127221.1(CACNA1A):c.6400C>T (p.Arg2134Ter) CACNA1A Nov 03, 2017 MedGen:CN517202 not provided germline 19 13209441 CGTTCAGCCTCCGTGCTGGGCCCCAAGGCCCGACGCCTGGACGATTACTCGCTGGAGCGGG 727503979 177139 NM_003482.3(KMT2D):c.15256C>T (p.Arg5086Ter) KMT2D Jun 28, 2017 MedGen:CN030661,OMIM:147920;MedGen:CN517202 Kabuki syndrome 1;not provided germline 12 49026710 GCACTGATGAATGTGGAGGTTGCCCTGCACCGAGGACTGCTAACCAAGTGCTCCCTGTGCC 869025315 223698 NM_173471.3(SLC25A26):c.596C>T (p.Pro199Leu) SLC25A26 Feb 11, 2016 MedGen:C4225206,OMIM:616794,Orphanet:ORPHA466784 Combined oxidative phosphorylation deficiency 28 germline 3 66369505 CAGGTGGATTTGCCGCTGCAGTCACCACCCCTCTAGACGTGGCAAAGACAAGAATTACGCT 61748421 26867 NM_004992.3(MECP2):c.502C>T (p.Arg168Ter) MECP2 Jul 31, 2017 Human Phenotype Ontology:HP:0001249,MedGen:C1843367;MedGen:C1968550,OMIM:300055;MedGen:C0035372,OMIM:312750,Orphanet:ORPHA778,SNOMED CT:68618008;MedGen:C1968556,OMIM:300673,Orphanet:ORPHA209370;MedGen:CN517202 Intellectual disability;Mental retardation, X-linked, syndromic 13;Rett syndrome;Severe neonatal-onset encephalopathy with microcephaly;not provided de novo;germline;maternal;unknown X 154031326 ACGGTAACTGGGAGAGGGAGCCCCTCCCGGCGAGAGCAGAAACCACCTAAGAAGCCCAAAT 137854466 31478 NM_000138.4(FBN1):c.8326C>T (p.Arg2776Ter) FBN1 Aug 10, 2017 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:CN118826,Orphanet:ORPHA91387;MedGen:CN517202 Marfan syndrome;Thoracic aortic aneurysm and aortic dissection;not provided germline 15 48411280 TTCAATATTTCCCACGTCAGTAACAAGGTTCGAATCCTAGAACTCCTTCCAGCTCTTACAA 104893762 28648 NM_001122757.2(POU1F1):c.793C>T (p.Pro265Ser) POU1F1 Jun 01, 1998 MedGen:C2751608,OMIM:613038 Pituitary hormone deficiency, combined 1 germline 3 87260055 CTGGAGAGACACTTTGGAGAACAGAATAAACCTTCTTCTCAAGAGATCATGAGGATGGCTG 371427844 260065 NM_002225.3(IVD):c.1183C>T (p.Arg395Cys) IVD Feb 26, 2016 MedGen:CN517202 not provided germline 15 40418165 AATGGCTACATCAATGACTTTCCCATGGGCCGCTTTCTTCGAGATGCCAAGCTGTATGAGA 121908043 228164 NM_000527.4(LDLR):c.1216C>T (p.Arg406Trp) LDLR Mar 30, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11113307 GGCTCCATCGCCTACCTCTTCTTCACCAACCGGCACGAGGTCAGGAAGATGACGCTGGACC -1 446873 NM_001142966.2(GREB1L):c.3295C>T (p.Gln1099Ter) GREB1L Dec 18, 2017 MedGen:CN703737,OMIM:617805 RENAL HYPODYSPLASIA/APLASIA 3 germline 18 21496602 ACTGTTGCCCTGGACCTCAGCGGGAAGGAGCAGGAGAGAGCTGCTGTCAGTGAGAATGACT 397514640 48596 NM_000280.4(PAX6):c.112C>T (p.Arg38Trp) PAX6 Feb 22, 2013 MedGen:C0344542,OMIM:106210 Aniridia 1 germline 11 31802733 AAGATTGTAGAGCTAGCTCACAGCGGGGCCCGGCCGTGCGACATTTCCCGAATTCTGCAGG 137852893 17830 NM_000158.3(GBE1):c.784C>T (p.Arg262Cys) GBE1 Nov 15, 2016 MedGen:C1856304,Orphanet:ORPHA308670;MedGen:C1849722,OMIM:263570,Orphanet:ORPHA206583 Glycogen storage disease IV, congenital neuromuscular;Polyglucosan body disease, adult germline;maternal 3 81642989 CTTCTTTTTGCTGTGTTCTTCATTGTTAGCCGTTATGGAACACCTGAAGAGCTACAAGAAC 137852608 24518 NM_001298.2(CNGA3):c.1228C>T (p.Arg410Trp) CNGA3 Jul 01, 1998 MedGen:C1857618,OMIM:216900 Achromatopsia 2 germline 2 98396398 GGCTCCATGATCTCGAATATGAATGCCTCACGGGCAGAGTTCCAGGCCAAGATTGATTCCA -1 470077 NM_007194.3(CHEK2):c.247C>T (p.Gln83Ter) CHEK2 Jan 17, 2017 MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006 Familial cancer of breast germline 22 28734475 TCTATTCCTGAGGACCAAGAACCTGAGGACCAAGAACCTGAGGAGCCTACCCCTGCCCCCT 869025203 213912 NM_032682.5(FOXP1):c.1540C>T (p.Arg514Cys) FOXP1 Feb 16, 2017 MedGen:C3150923,OMIM:613670 Mental retardation with language impairment and with or without autistic features de novo;germline;not applicable 3 70972667 TCTCTTTTATACTTGCTGCAGAATGCAGTGCGTCATAATCTTAGTCTTCACAAGTGTTTTG 397515561 76605 NM_005982.3(SIX1):c.334C>T (p.Arg112Cys) SIX1 Jun 20, 2013 MedGen:C0265234,OMIM:113650,Orphanet:ORPHA107,SNOMED CT:290006 Melnick-Fraser syndrome not provided 14 60648856 CCCCTGGGCGCCGTGGGCAAATATCGGGTGCGCCGAAAATTTCCACTGCCGCGCACCATCT -1 452357 NM_145860.1(PDCD10):c.322C>T (p.Arg108Ter) PDCD10 Jun 15, 2017 MedGen:C1864040,OMIM:603285;MedGen:CN517202 Cerebral cavernous malformations 3;not provided germline 3 167695669 CCAGAATTCCAAGACCTAAACGAAAAGGCACGAGCACTTAAACAAATTCTCAGTAAGATCC 878853280 214799 NM_014334.3(FRRS1L):c.961C>T (p.Gln321Ter) FRRS1L Aug 25, 2016 Human Phenotype Ontology:HP:0002072,MedGen:C0008489,Orphanet:ORPHA306715;MedGen:C4310770,OMIM:616981;Human Phenotype Ontology:HP:0002448,MedGen:C1838578;Human Phenotype Ontology:HP:0001250,MedGen:C0036572 Chorea;Epileptic encephalopathy, early infantile, 37;Progressive encephalopathy;Seizures germline;inherited 9 109137529 GAAGACATTTTTATGCCATCAGCTGCCTATCAAACCTTCTCATCTCCATTTTGTTTGCTTC 63750973 33139 NM_000484.3(APP):c.2141C>T (p.Thr714Ile) APP Jan 25, 2005 MedGen:C1863052;MedGen:CN517202 Alzheimer disease, type 1;not provided germline 21 25891792 GACTCATGGTGGGCGGTGTTGTCATAGCGACAGTGATCGTCATCACCTTGGTGATGCTGAA 137853202 28243 NM_198843.2(SFTPB):c.742C>T (p.Arg248Cys) SFTPB Dec 01, 1995 MedGen:C1968602,OMIM:265120,Orphanet:ORPHA217563 Surfactant metabolism dysfunction, pulmonary, 1 germline 2 85663814 GCGCTAGCTGTGGCAGTGGCCCAGGTGTGCCGCGTGGTACCTCTGGTGGCGGGCGGCATCT 587776577 18539 NM_024426.4(WT1):c.1432+4C>T WT1 Mar 31, 2017 MedGen:C0268747,OMIM:256370,SNOMED CT:111406002,SNOMED CT:236383002;MedGen:C0950122,OMIM:136680,Orphanet:ORPHA347,SNOMED CT:445431000;MedGen:CN043611;MedGen:CN517202 Diffuse mesangial sclerosis;Frasier syndrome;Hereditary nephrotic syndrome;not provided germline 11 32391968 ACACCAGGACTCATACAGGTAAAACAAGTGCGTAAACTTTTCTTCACATTTATTTTTCATT 767713084 226968 NM_001242875.2(ELP2):c.1579C>T (p.Arg527Trp) ELP2 Dec 23, 2016 MeSH:D030342,MedGen:C0950123;MedGen:C4310641,OMIM:617270;MedGen:CN517202 Inborn genetic diseases;Mental retardation, autosomal recessive 58;not provided germline 18 36156574 TTTGTATCTGGAGCAGATGAAAAAGTTCTTCGGGTTTTTTCTGCACCTCGGAATTTTGTGG 121908255 21865 NM_005189.2(CBX2):c.293C>T (p.Pro98Leu) CBX2 May 01, 2009 MedGen:C2751317,OMIM:613080 46,XY sex reversal, type 5 germline 17 79783736 AGCCAACTTCTCCTTTATCTTTCCAGGAACCCGATGCTCCCTCCAAATCCAAGTCCAGCAG 281865104 34670 NM_181507.1(HPS5):c.2593C>T (p.Arg865Ter) HPS5 Aug 02, 2017 MedGen:C3888004,OMIM:614074 Hermansky-Pudlak syndrome 5 germline 11 18287659 TTGTATGAAAAGTTTGGGGAGTCTGCTCTTCGATCCTTAATCAAGTTCTTTCCATCCATTT 878853865 242637 NM_000267.3(NF1):c.1381C>T (p.Arg461Ter) NF1 Aug 29, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Neurofibromatosis, type 1;not provided de novo;germline 17 31206360 GTGCAAGGTTGTGGAGCACACCCAGCAATACGAATGGCACCGGTAAGATAAATCACGAATT 387906843 39241 NM_002878.3(RAD51D):c.556C>T (p.Arg186Ter) RAD51D Sep 27, 2017 MedGen:C3280345,OMIM:614291;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 4;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline;unknown 17 35106406 TTCCAGATGCTGGATGTGCTGCAGGAGCTCCGAGGCACTGTGGCCCAGCAGGTGAGCCTGC 121918354 22642 NM_000299.3(PKP1):c.910C>T (p.Gln304Ter) PKP1 Oct 01, 1997 MedGen:C1858302,OMIM:604536,Orphanet:ORPHA158668 Ectodermal dysplasia skin fragility syndrome germline 1 201317635 GACCTCCTCCGCAGCCCCAACCAGAACGTCCAGCAGGCCGCGGCAGGGGCCCTGCGCAACC 199469662 44121 NM_006726.4(LRBA):c.5047C>T (p.Arg1683Ter) LRBA Jul 06, 2012 MedGen:C3553512,OMIM:614700,Orphanet:ORPHA445018 Common variable immunodeficiency 8, with autoimmunity germline 4 150828304 TCAAAAAACGTCAATGTGAAAGACATTCTCCGAAGCTTGGTTAACATACCAGCAGATGGAG 121908578 21210 NM_004328.4(BCS1L):c.550C>T (p.Arg184Cys) BCS1L Oct 06, 2016 MedGen:C4016851;MedGen:C1852372,OMIM:124000;MedGen:CN517202 Bjornstad syndrome with mild mitochondrial complex III deficiency;Mitochondrial complex III deficiency;not provided germline 2 218661848 TCTGAATGGCGTCCCTTTGGCTATCCACGCCGCCGGCGACCACTGAATTCTGTGGTTCTAC 765468034 230729 NM_016239.3(MYO15A):c.5896C>T (p.Arg1966Ter) MYO15A Jun 08, 2015 MedGen:CN043648,Orphanet:ORPHA87884 Nonsyndromic hearing loss and deafness germline 17 18142826 CGGTCCCTGGTACACGCATACGTGAGCCGCCGACGCTATCTCAAGGTATAGGCCCTACCCT 748089700 358799 NM_004168.3(SDHA):c.1534C>T (p.Arg512Ter) SDHA Oct 27, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C3279992,OMIM:614165;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Paragangliomas 5;not provided germline;unknown 5 240459 GCTGATGGAAGCATAAGAACATCGGAACTGCGACTCAGCATGCAGAAGGTAAGAGCCTGGA 80356595 34692 NM_194248.2(OTOF):c.2887C>T (p.Arg963Ter) OTOF Apr 26, 2011 MedGen:C1832828,OMIM:601071 Deafness, autosomal recessive 9 not provided 2 26476018 TTCCCCACAGAGAAGCAGGCGTTCCAGCTCCGAGCGCACATGTACCAGGCCCGCAGCCTCT 797045969 207916 NM_024698.5(SLC25A22):c.418C>T (p.Gln140Ter) SLC25A22 Sep 07, 2017 MedGen:C0270855,OMIM:609304,Orphanet:ORPHA1935,SNOMED CT:44423001;MedGen:CN517202 Early myoclonic encephalopathy;not provided germline 11 792722 GAGACAGCAGCCTCTTTGTCCCCAGCCGCCCAGAGGAAGATCCTGGCTGCCCAGGGCCAGC 559979281 214737 NR_023343.1(RNU4ATAC):n.13C>T RNU4ATAC Nov 02, 2015 Gene:57788,MedGen:C1846059,OMIM:616651,Orphanet:ORPHA353298 Roifman syndrome germline 2 121530892 CCAGGGACTTTCTATTATAACCATCCTTTTCTTGGGGTTGCGCTACTGTCCAATGAGCGCA 786202023 184620 NM_001042492.2(NF1):c.3208C>T (p.Gln1070Ter) NF1 Jun 18, 2014 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 17 31232083 TTTTTTTTTTTTTTTTTCAGAGATTTGGACCAGGCAAGCATGGAAGCAGTAGTTTCACTTC 781368899 195475 NM_138694.3(PKHD1):c.10219C>T (p.Gln3407Ter) PKHD1 May 23, 2014 MedGen:C0085548,OMIM:263200,Orphanet:ORPHA731,SNOMED CT:28770003 Autosomal recessive polycystic kidney disease germline 6 51659907 CAATTTCTGATGCAAGGATTCATCTGCAAACAGACTGACCAAGTGGTCCTAATTCTTGATA 201257588 409576 NM_001199107.1(TBC1D24):c.58C>T (p.Gln20Ter) TBC1D24 Jan 30, 2017 MedGen:CN517202 not provided germline 16 2496206 GTGGACAAAGACAAGATGGACGCTGCCATCCAGGACCTGGGGCCCAAGGAGCTGAGCTGCA 118203631 58047 NM_000368.4(TSC1):c.2074C>T (p.Arg692Ter) TSC1 Feb 23, 2017 MedGen:C0005684,OMIM:109800,Orphanet:ORPHA157980,SNOMED CT:399326009;MedGen:C1854465,OMIM:191100;MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000;MedGen:CN517202 Malignant tumor of urinary bladder;Tuberous sclerosis 1;Tuberous sclerosis syndrome;not provided germline 9 132903785 TCTCCTCCTTCAGATGAGATCCGCACCCTCCGAGACCAGTTGCTTTTACTGCACAACCAGT 398123721 100076 NM_003482.3(KMT2D):c.14710C>T (p.Arg4904Ter) KMT2D Feb 08, 2013 MedGen:CN030661,OMIM:147920 Kabuki syndrome 1 germline 12 49027256 TATACCTACAATGTCTCCAATCTGGATGTGCGACAGCTCTCGGCCCCACCTCCTGAAGAAC 137852766 23785 NM_000076.2(CDKN1C):c.139C>T (p.Gln47Ter) CDKN1C Mar 01, 1999 MedGen:C0004903,OMIM:130650,Orphanet:ORPHA116,SNOMED CT:81780002 Beckwith-Wiedemann syndrome germline 11 2885351 GTGGACCACGAGGAGCTGAGCCGCGAGCTGCAGGCCCGCCTGGCCGAGCTGAACGCCGAGG 754051090 244007 NM_002437.4(MPV17):c.106C>T (p.Gln36Ter) MPV17 May 31, 2016 MedGen:C1850406,OMIM:256810,Orphanet:ORPHA255229 Navajo neurohepatopathy inherited 2 27313074 CTGATGGGCCTGGGTGACATTATCTCACAGCAGCTGGTGGAGAGGCGGGGTCTGCAGGAAC 72558451 103227 NM_000531.5(OTC):c.808C>T (p.Gln270Ter) OTC - MedGen:CN517202 not provided unknown X 38408966 TTAATTACAGACACTTGGATAAGCATGGGACAAGAAGAGGAGAAGAAAAAGCGGCTCCAGG 63750114 95517 NM_000249.3(MLH1):c.2101C>T (p.Gln701Ter) MLH1 Sep 05, 2013 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Lynch syndrome germline 3 37049015 ATATCTGAGGAGTCGACCCTCTCAGGCCAGCAGGTACAGTGGTGATGCACACTGGCACCCC 179363889 79109 NM_000383.3(AIRE):c.1616C>T (p.Pro539Leu) AIRE Feb 25, 2016 MedGen:C0085859,OMIM:240300,Orphanet:ORPHA3453,SNOMED CT:11244009;MedGen:CN517202 Polyglandular autoimmune syndrome, type 1;not provided germline;unknown 21 44297705 TGCAGTGGGCCATCCAGAGCATGGCCCGTCCGGCGGCCCCCTTCCCCTCCTGACCCCAGAT 775080726 439495 NM_153223.3(CEP120):c.1646C>T (p.Ala549Val) CEP120 Nov 06, 2017 MedGen:CN593637,OMIM:617761 JOUBERT SYNDROME 31 germline 5 123385068 AAATGAGTAAAGATTTACTTCTGGGAATTGCGAGAATCCAGCTTTCTAACATCTTGTCTTC 137852433 25281 NM_000132.3(F8):c.1988C>T (p.Ala663Val) F8 Oct 01, 1991 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154947823 TGGCATACTGGTACATTCTAAGCATTGGAGCACAGACTGACTTCCTTTCTGTCTTCTTCTC 1060500122 397489 NM_000314.6(PTEN):c.445C>T (p.Gln149Ter) PTEN Nov 23, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1959582,OMIM:601728,Orphanet:ORPHA306498 Hereditary cancer-predisposing syndrome;PTEN hamartoma tumor syndrome germline 10 87933204 TTATTACATCGGGGCAAATTTTTAAAGGCACAAGAGGCCCTAGATTTCTATGGGGAAGTAA 377357931 213812 NM_014845.5(FIG4):c.1141C>T (p.Arg381Ter) FIG4 Jan 16, 2014 MedGen:C1970011,OMIM:611228,Orphanet:ORPHA139515 Charcot-Marie-Tooth disease, type 4J germline 6 109760253 ACTGAAAATGTTTAATTTTTGATAAAGGAACGAGAGAAAAGAAAGCATGAAAGAATTCTGA 587777167 106652 NM_012414.3(RAB3GAP2):c.1276C>T (p.Arg426Cys) RAB3GAP2 May 01, 2013 MedGen:C0796037,OMIM:212720,Orphanet:ORPHA1387 Martsolf syndrome germline 1 220191279 ACTTCCCTTTACCTCTGTCTCTAAGGGTACCGCGACGCACAAATTGGATGGATTCAAACTG 747993448 181710 NM_001128425.1(MUTYH):c.544C>T (p.Arg182Cys) MUTYH Sep 14, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1837991,OMIM:608456,Orphanet:ORPHA247798;MedGen:CN517202 Hereditary cancer-predisposing syndrome;MYH-associated polyposis;not provided germline;unknown 1 45332795 CAACTCTGGGCTGGCCTGGGCTACTATTCTCGTGGCCGGCGGCTGCAGGAGGGAGCTCGGA 80358631 66218 NM_000059.3(BRCA2):c.3871C>T (p.Gln1291Ter) BRCA2 Sep 08, 2016 MedGen:C2675520,OMIM:612555 Breast-ovarian cancer, familial 2 germline;unknown 13 32338226 AAAACTGTAAGTGAAAAAAATAATAAATGCCAACTGATATTACAAAATAATATTGAAATGA 76871093 24203 NM_000344.3(SMN1):c.821C>T (p.Thr274Ile) SMN1 Jul 31, 2017 MedGen:C0152109,OMIM:253400,Orphanet:ORPHA83419,SNOMED CT:54280009;MedGen:C0393538,OMIM:253550,Orphanet:ORPHA83418,SNOMED CT:128212001;MedGen:CN517202 Kugelberg-Welander disease;Spinal muscular atrophy, type II;not provided germline 5 70946163 TAATTTCATGGTACATGAGTGGCTATCATACTGGCTATTATATGGTAAGTAATCACTCAGC 587778773 76731 NM_000142.4(FGFR3):c.791C>T (p.Thr264Met) FGFR3 Sep 26, 2013 MedGen:C0410529,OMIM:146000,Orphanet:ORPHA429,SNOMED CT:205468002 Hypochondroplasia not provided 4 1801886 TCCTGCAGGCGGGGCTGCCGGCCAACCAGACGGCGGTGCTGGGCAGCGACGTGGAGTTCCA -1 481274 NM_001288653.1(CLTC):c.2681C>T (p.Pro894Leu) CLTC Feb 02, 2018 MedGen:CN787270,OMIM:617854 MENTAL RETARDATION, AUTOSOMAL DOMINANT 56 germline 17 59677061 CCAAAATCTACATAGACAGTAATAACAACCCGGAGAGATTTCTTCGTGAAAATCCCTACTA 1085307150 414076 NM_001204.6(BMPR2):c.28C>T (p.Arg10Trp) BMPR2 - MedGen:C0152171,OMIM:178600,SNOMED CT:26174007 Primary pulmonary hypertension germline 2 202377502 GGGATGACTTCCTCGCTGCAGCGGCCCTGGCGGGTGCCCTGGCTACCATGGACCATCCTGC 748529285 206735 NM_018136.4(ASPM):c.10060C>T (p.Arg3354Ter) ASPM Jul 23, 2015 MedGen:C1837501,OMIM:608716 Primary autosomal recessive microcephaly 5 germline 1 197088357 GATATACTATTGGAGCTTTTGCAGATATACCGAGAAAAGCCTGGTAATAAAGTTGCAGACA 373273223 200708 NM_024741.2(ZNF408):c.1363C>T (p.His455Tyr) ZNF408 Jun 11, 2013 MedGen:C4225316,OMIM:616468 Exudative vitreoretinopathy 6 germline 11 46705063 GCCTTTGCCCGCCGGCCCTCCCTGCGGCTGCATCGCAAGACCCACCAGGTGCCAGCTGCCC 121908538 21017 NM_003850.2(SUCLA2):c.850C>T (p.Arg284Cys) SUCLA2 Mar 01, 2007 MedGen:C2749864,OMIM:612073,Orphanet:ORPHA1933 Mitochondrial DNA depletion syndrome 5 (encephalomyopathic with or without methylmalonic aciduria) germline 13 47954510 AAGATCAATTTTGACTCTAATTCAGCCTATCGCCAAAAGAAAATCTTTGATCTACAGGACT 28937882 20065 NM_020638.2(FGF23):c.535C>T (p.Arg179Trp) FGF23 Nov 20, 2015 MedGen:C0342642,OMIM:193100,Orphanet:ORPHA89937,SNOMED CT:237889002;MedGen:CN517202 Autosomal dominant hypophosphatemic rickets;not provided germline 12 4370564 TTCAACACCCCCATACCACGGCGGCACACCCGGAGCGCCGAGGACGACTCGGAGCGGGACC 373585652 100252 NM_003494.3(DYSF):c.610C>T (p.Arg204Ter) DYSF Nov 02, 2016 MedGen:C1850889,OMIM:253601,Orphanet:ORPHA268;MedGen:C1850808,OMIM:254130,Orphanet:ORPHA45448 Limb-girdle muscular dystrophy, type 2B;Miyoshi muscular dystrophy 1 germline;unknown 2 71513868 CCGCCCCACTACCCCGGGATCAAAAGAAAGCGAAGTGCGCCTACATCTAGAAAGCTGCTGT 752362727 214282 NM_153704.5(TMEM67):c.1321C>T (p.Arg441Cys) TMEM67 Feb 23, 2015 Human Phenotype Ontology:HP:0002335,MedGen:C0431399,Orphanet:ORPHA475,SNOMED CT:253175003,SNOMED CT:716997004;MedGen:C1853153,OMIM:610688;Human Phenotype Ontology:HP:0001562,MedGen:C0079924;Human Phenotype Ontology:HP:0000107,MedGen:C0022679 Joubert syndrome;Joubert syndrome 6;Oligohydramnios;Renal cyst unknown 8 93786255 AGCAACTCTGGAAAGTGGCTTCTAACTCGGCGCATTTTCTTAGTGGATGCAGTAAGTGGAC 786202500 181840 NM_000465.3(BARD1):c.496C>T (p.Gln166Ter) BARD1 Jul 20, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline 2 214781378 TATGTTGTGAGTAAAGCTTCAGTGCAAACCCAGCCTGCAATAAAAAAAGATGCAAGTGCTC 749083759 421167 NM_002016.1(FLG):c.10969C>T (p.Arg3657Ter) FLG Sep 08, 2015 MedGen:CN517202 not provided germline 1 152303917 GCTTCATCTGCAGTCAGAGACAGTGGACACCGAGGGTCCAGTGGTAGTCAGGCCAGTGACA 1131691647 421198 NM_001005337.2(PKP1):c.1840C>T (p.Gln614Ter) PKP1 Oct 14, 2015 MedGen:CN517202 not provided germline 1 201324946 GTGCCCCAACTCGTTCCTCTCCCAGGGAACCAGGTGTTCCCGGAGGTGACCAGGCTCCTCA 869312668 225815 NM_001005463.2(EBF3):c.530C>T (p.Pro177Leu) EBF3 Feb 07, 2017 MedGen:C4310618,OMIM:617330 Hypotonia, ataxia, and delayed development syndrome de novo;germline 10 129957282 AGAAAAGTTGTGGCAATAGAAACGAAACGCCCTCAGACCCTGTAATCATTGACAGGTAAGG 28929469 33061 NM_000488.3(SERPINC1):c.166C>T (p.Arg56Cys) SERPINC1 Oct 07, 2016 MedGen:C0272375,OMIM:613118,Orphanet:ORPHA82,SNOMED CT:36351005;MedGen:CN517202 Antithrombin III deficiency;not provided germline 1 173914795 GACATTCCCATGAATCCCATGTGCATTTACCGCTCCCCGGAGAAGAAGGCAACTGAGGATG 72653743 426873 NM_001171.5(ABCC6):c.3427C>T (p.Gln1143Ter) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16163072 GGCAGCACAGTGGTCCGGGCATTCCGAACCCAGGCCCCCTTTGTGGCTCAGAACAATGCTC 281865008 47667 NM_024312.4(GNPTAB):c.3061C>T (p.Gln1021Ter) GNPTAB May 10, 2012 MedGen:C2673377,OMIM:252500,Orphanet:ORPHA576 I cell disease not provided 12 101761201 TCTCAAGTCTTTGATGAAGTTGATACAGATCAATCTGGTGTCTTGTCTGACAGAGAAATCC 104894708 19833 NM_181882.2(PRX):c.3208C>T (p.Arg1070Ter) PRX Nov 01, 2012 MedGen:C3540453,OMIM:614895,Orphanet:ORPHA99952;MedGen:C0011195,OMIM:145900,Orphanet:ORPHA64748,SNOMED CT:111499002 Charcot-Marie-Tooth disease, demyelinating, type 4f;Dejerine-Sottas disease germline;inherited 19 40395144 AAGCTGAAGATGCCTTCCTTTGGGCTGGCTCGAGGGAAGGAAGCAGAAGTTCAAGGTGATC 1131690865 420569 NM_000321.2(RB1):c.2104C>T (p.Gln702Ter) RB1 Sep 18, 2013 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 13 48459831 TATGAACTCATGAGAGACAGGCATTTGGACCAAGTAAGAAAATCAAGCACTTCACCTTCTC -1 481212 NM_017780.3(CHD7):c.925C>T (p.Gln309Ter) CHD7 Oct 27, 2017 MedGen:C0265354,OMIM:214800,Orphanet:ORPHA138,SNOMED CT:47535005 CHARGE association unknown 8 60742357 GTCCCCTCTCCTACTATAAACAACTCAGGGCAGTATTCTCGATATCCTTACAGTAACCTAA 369656775 237796 NM_016111.3(TELO2):c.779C>T (p.Pro260Leu) TELO2 Jun 17, 2016 MedGen:C4310778,OMIM:616954 You-Hoover-Fong syndrome germline 16 1497457 GCGTCTGCTGGCGCCTGGTGGAGCAAGTGCCGGACCGGGCCATGGAGGCTGTGCTGACCGG 104894074 24071 NM_002052.4(GATA4):c.155C>T (p.Ser52Phe) GATA4 May 15, 2005 MedGen:C1842778,OMIM:607941 Atrial septal defect 2 germline 8 11708467 CGCGGGTGCCCTCCTCCGTGCTGGGCCTGTCCTACCTCCAGGGCGGAGGCGCGGGCTCTGC 121918185 15947 NM_000181.3(GUSB):c.1069C>T (p.Arg357Ter) GUSB Nov 01, 2014 MedGen:C0085132,OMIM:253220,Orphanet:ORPHA584;MedGen:C0455988,OMIM:236750,Orphanet:ORPHA363999,SNOMED CT:276509008 Mucopolysaccharidosis type VII;Non-immune hydrops fetalis germline 7 65974701 GGGTCACTTGGCTCTGCTATCTCCTAGATCCGAGGGAAGGGCTTCGACTGGCCGCTGCTGG 398122939 65653 NM_018684.3(ZC4H2):c.601C>T (p.Pro201Ser) ZC4H2 May 02, 2013 MedGen:C0796200,OMIM:314580,Orphanet:ORPHA3454 Wieacker syndrome germline X 64917857 TCATGTCACCAGCAAATTCACCGGAATGCACCTATATGCCCTCTTTGCAAGGCCAAGAGTC 730881333 180387 NM_000051.3(ATM):c.538C>T (p.Gln180Ter) ATM Sep 07, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:CN517202 Ataxia-telangiectasia syndrome;not provided germline 11 108243994 GTGTACTTCAGGCTCTATCTGAAACCTTCACAAGATGTTCATAGAGTTTTAGTGGCTAGAA 1034327724 455810 NM_001010892.2(RSPH4A):c.1453C>T (p.Arg485Ter) RSPH4A Apr 05, 2017 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244 Ciliary dyskinesia germline 6 116628160 CCTTTCCCAGGAAATGAGAGTAATTATTTACGAGCACAAATTGCCCGAATTTCAGCAGGAA 267607022 21226 NM_001014.4(RPS10):c.337C>T (p.Arg113Ter) RPS10 Aug 01, 2013 MedGen:C2750081,OMIM:613308 Diamond-Blackfan anemia 9 germline 6 34421793 GGTTTGATTTACATAGGTCTGGAGGGTGAGCGACCTGCGAGACTCACAAGAGGGGAAGCTG 28940286 17440 NM_001024943.1(ASL):c.1153C>T (p.Arg385Cys) ASL Feb 02, 2017 MedGen:C0268547,OMIM:207900,Orphanet:ORPHA23,SNOMED CT:41013004 Argininosuccinate lyase deficiency germline;unknown 7 66092566 ATCTTCCTCCCTGGCACCCAGATGCCATTCCGCCAGGCCCACGAGGCCTCCGGGAAAGCTG 777652245 264397 NM_017780.3(CHD7):c.5029C>T (p.Arg1677Ter) CHD7 Jun 09, 2016 MedGen:CN517202 not provided germline 8 60845042 CTGATCACACCCACAGCGGATGGCCAGACTCGAGCCTTGGTCAACCATTCCGGTAGGTCTC 1057516953 357529 NM_000441.1(SLC26A4):c.281C>T (p.Thr94Ile) SLC26A4 Jun 10, 2016 MedGen:C0271829,OMIM:274600,Orphanet:ORPHA705,SNOMED CT:70348004 Pendred's syndrome unknown 7 107663412 TGCTTAGTGACGTCATTTCGGGAGTTAGTACTGGGCTAGTGGCCACGCTGCAAGGTAAGAT 121912496 29563 NM_170707.3(LMNA):c.745C>T (p.Arg249Trp) LMNA Oct 19, 2017 MedGen:C0410190,OMIM:181350,Orphanet:ORPHA98853,SNOMED CT:240072005;MedGen:C2750785,OMIM:613205,Orphanet:ORPHA157973;MedGen:CN517202 Benign scapuloperoneal muscular dystrophy with cardiomyopathy;Congenital muscular dystrophy, LMNA-related;not provided germline 1 156134910 AGCCGGCTGGCGGATGCGCTGCAGGAACTGCGGGCCCAGCATGAGGACCAGGTGGAGCAGT 29001637 28054 NM_000539.3(RHO):c.1039C>T (p.Pro347Ser) RHO Nov 26, 1996 MedGen:C3151001,OMIM:613731 Retinitis pigmentosa 4 germline 3 129533710 GTGTCCAAGACGGAGACGAGCCAGGTGGCCCCGGCCTAAGACCTGCCTAGGACTCTGTGGC 104893952 23494 NM_001453.2(FOXC1):c.67C>T (p.Gln23Ter) FOXC1 Feb 01, 2001 MedGen:C2678503,OMIM:602482 Axenfeld-Rieger syndrome type 3 germline 6 1610512 CTGGGAGTGGTGCCCTACCTCGGCGGCGAGCAGAGCTACTACCGCGCGGCGGCCGCGGCGG 113994143 17136 NM_000920.3(PC):c.1351C>T (p.Arg451Cys) PC Jul 21, 2011 MedGen:C0034341,OMIM:266150,SNOMED CT:87694001 Pyruvate carboxylase deficiency germline 11 66863791 ACCAAGATGAGCAGGGCCCTTGCGGAGTTCCGCGTCCGAGGTGTGAAGGTGAGAGGCTGCA 56699480 29553 NM_170707.3(LMNA):c.1477C>T (p.Gln493Ter) LMNA Jan 22, 2018 MedGen:C1834653,OMIM:159001,Orphanet:ORPHA264;MedGen:CN517202 Limb-girdle muscular dystrophy, type 1B;not provided germline 1 156137017 TTCCCACCAAAGTTCACCCTGAAGGCTGGGCAGGTGGTGACGGTGAGTGGCAGGGCGCTTG -1 433055 NM_000118.3(ENG):c.1306C>T (p.Gln436Ter) ENG Feb 24, 2017 MedGen:C0039445,OMIM:187300,Orphanet:ORPHA774,SNOMED CT:21877004;MedGen:CN169374 Osler hemorrhagic telangiectasia syndrome;not specified germline;somatic 9 127819627 GTGGTCAATATCCTGTCGAGCTCATCACCACAGCGGGTGAGATGGACAGTCACGTGCTAAC 759363072 407938 NM_004329.2(BMPR1A):c.730C>T (p.Arg244Ter) BMPR1A Aug 23, 2016 MedGen:CN517202 not provided germline 10 86917188 ATTCAGATGGTCCGGCAAGTTGGTAAAGGCCGATATGGAGAAGTATGGATGGGCAAATGGC 797045058 205744 NM_022455.4(NSD1):c.7966C>T (p.Gln2656Ter) NSD1 Mar 20, 2014 MedGen:CN035106,OMIM:117550 Sotos syndrome 1 de novo 5 177295334 GCACAGTCTTGCTGGTCTGCTGGGAGCACACAGACATTGGCACAGACTTGCTGGTCTCTTG 202100019 406034 NM_006463.5(STAMBP):c.938C>T (p.Thr313Ile) STAMBP Mar 24, 2017 MedGen:CN517202 not provided germline 2 73850446 AGCAAAGTGCTGGGTCTGATTACTGCAACACAGAGAACGAAGAAGAACTTTTCCTCATACA 886040711 261415 NM_000059.3(BRCA2):c.7501C>T (p.Gln2501Ter) BRCA2 Oct 18, 2016 MedGen:C2675520,OMIM:612555;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 2;Hereditary cancer-predisposing syndrome germline 13 32356493 CAGGATATGCGAATTAAGAAGAAACAAAGGCAACGCGTCTTTCCACAGCCAGGCAGTCTGT 863225387 214580 NM_000251.2(MSH2):c.1237C>T (p.Gln413Ter) MSH2 Jul 01, 2014 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline;unknown 2 47429902 GATTGTTACCGACTCTATCAGGGTATAAATCAACTACCTAATGTTATACAGGCTCTGGAAA 80338672 17818 NM_000158.3(GBE1):c.1543C>T (p.Arg515Cys) GBE1 Aug 30, 2013 MedGen:C1856301;MedGen:C0017923,OMIM:232500,SNOMED CT:11179002;MeSH:D030342,MedGen:C0950123 Glycogen storage disease IV, classic hepatic;Glycogen storage disease, type IV;Inborn genetic diseases germline 3 81578000 GTCCTGACTCCTTTTACTCCAGTTATTGATCGTGGAATACAGCTTCATAAAATGATTCGAC -1 482012 NM_015335.4(MED13L):c.3469C>T (p.Gln1157Ter) MED13L Jan 02, 2018 MedGen:CN517202 not provided germline 12 115991485 CTTTACATCCCCGATTCTTCCAATGAGGACCAGTACCGCTGTACCTGTGGGTTTAGTGCGA 398122405 94424 NM_001256865.1(DNAJC6):c.2200C>T (p.Gln734Ter) DNAJC6 Nov 21, 2013 MedGen:C3809811,OMIM:615528 Parkinson disease 19a, juvenile-onset germline 1 65406052 CCTCAGCCCAGCATGCCCCACTCCTCTCCCCAGAACCGACCCAACTACAACGTGAGCTTCT 121908607 21152 NM_176806.3(MOCS2):c.16C>T (p.Gln6Ter) MOCS2 Nov 22, 2001 MedGen:C1854989,OMIM:252160,Orphanet:ORPHA308393 Molybdenum cofactor deficiency, complementation group B germline 5 53109714 GCTGTCCTAGGCGGGATGGTGCCGCTGTGCCAGGTAAGGGTGGCGGGTGTGCGTGCGGGCC 397514622 48451 NM_001170961.1(IGSF1):c.2588C>T (p.Ser863Phe) IGSF1 Dec 01, 2012 MedGen:C3550963,OMIM:300888,Orphanet:ORPHA329235 Hypothyroidism, central, and testicular enlargement germline X 131276974 GCTGCCGATATTATGACTTTTCTATCTGGTCTGAGCCCAGCGACCCTGTGGAGCTCGTGGT 121918419 31088 NM_021957.3(GYS2):c.736C>T (p.Arg246Ter) GYS2 Aug 01, 1998 MedGen:C1855861,OMIM:240600,Orphanet:ORPHA2089 Hypoglycemia with deficiency of glycogen synthetase in the liver germline 12 21568952 AGGCAGATTTACCACCGGTACTGCATGGAGCGAGCTTCCGTTCATTGCGCTCACGTGTTCA 796052515 201901 NM_000816.3(GABRG2):c.1336C>T (p.Arg446Trp) GABRG2 May 02, 2013 MedGen:CN517202 not provided germline 5 162153300 ATCCGCATTGCCAAAATGGACTCCTATGCTCGGATCTTCTTCCCCACTGCCTTCTGCCTGT 879255260 205421 NM_000445.4(PLEC):c.1486C>T (p.Gln496Ter) PLEC Jan 14, 2014 MedGen:C1856934,OMIM:226730,Orphanet:ORPHA79403 Epidermolysis bullosa junctionalis with pyloric atresia germline 8 143933210 CTCAAGGATGGACGGCACCCGCAGGGCGAGCAGATGTACCGCAGGTGGGCCCCGCCCTGCC 587777444 141321 NM_000414.3(HSD17B4):c.1538C>T (p.Pro513Leu) HSD17B4 Mar 18, 2014 MedGen:C0685838,OMIM:233400,Orphanet:ORPHA2855,SNOMED CT:93466004 Gonadal dysgenesis with auditory dysfunction, autosomal recessive inheritance germline 5 119525250 CTTTGTACCGCCTCAGTGGAGACTGGAATCCCTTACACATTGATCCTAACTTTGCTAGTCT 587782400 152065 NM_004329.2(BMPR1A):c.817C>T (p.Arg273Ter) BMPR1A Sep 07, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0345893,OMIM:174900,Orphanet:ORPHA329971,SNOMED CT:9273005;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Juvenile polyposis syndrome;not provided germline 10 86917275 TTCTTTACCACTGAAGAAGCCAGCTGGTTTCGAGAAACAGAAATCTACCAAACTGTGCTAA 794727279 192405 NM_001128227.2(GNE):c.79C>T (p.Arg27Ter) GNE May 22, 2016 MedGen:C1833373,OMIM:600737 Inclusion body myopathy 2 germline 9 36249370 CAGGAACTCTATTTTAAGAACCTCTCAAAACGAAACAAGCAAATCATGGAGAAGAATGGAA 587783712 168963 NM_003482.3(KMT2D):c.3553C>T (p.Gln1185Ter) KMT2D Feb 08, 2013 MedGen:CN030661,OMIM:147920 Kabuki syndrome 1 germline 12 49050035 ACAGCAGGGCAGGGCTCACCATGTGAAGAACAGGAAGAGCCACGTGCACCGGTGGCCCCCA 748416758 456937 NM_001458.4(FLNC):c.6976C>T (p.Arg2326Ter) FLNC Jun 29, 2017 MedGen:CN239310 Dilated Cardiomyopathy, Dominant germline 7 128854661 AAGGTGCGGGCCGGAGGCACAGGGCTGGAGCGAGGTGTGGCCGGCGTGCCAGGTAAGGGGC 886040193 261679 NM_007294.3(BRCA1):c.4066C>T (p.Gln1356Ter) BRCA1 Oct 18, 2016 MedGen:C2676676,OMIM:604370 Breast-ovarian cancer, familial 1 germline 17 43091465 GAAAGAGGAACGGGCTTGGAAGAAAATAATCAAGAAGAGCAAAGCATGGATTCAAACTTAG 104894698 29870 NM_005543.3(INSL3):c.304C>T (p.Arg102Cys) INSL3 Sep 01, 2003 Human Phenotype Ontology:HP:0000028,MedGen:C0010417,OMIM:219050 Cryptorchidism, unilateral or bilateral germline 19 17816946 CAGCCCCTGCCCCAGACCTCTCACCATCACCGCCACCACCGTGCAGCTGCCACCAACCCTG 730882249 181423 NM_004722.3(AP4M1):c.952C>T (p.Arg318Ter) AP4M1 Dec 01, 2014 Human Phenotype Ontology:HP:0012444,MedGen:C0235946;Human Phenotype Ontology:HP:0003429,MedGen:C0544820;Human Phenotype Ontology:HP:0001263,MedGen:C4020875;Human Phenotype Ontology:HP:0002079,MedGen:C0344482;Human Phenotype Ontology:HP:0000252,MedGen:C0424688;MedGen:C2752008,OMIM:612936 Brain atrophy;CNS hypomyelination;Global developmental delay;Hypoplasia of the corpus callosum;Microcephaly;Spastic paraplegia 50, autosomal recessive germline 7 100105981 TCATCCAGGCTCCAGGTTTATCTAAAGTTGCGATGTGACCTGCTCTCAAAGAGGTAAGAGT 201065226 199958 NM_000098.2(CPT2):c.370C>T (p.Arg124Ter) CPT2 Oct 02, 2017 MedGen:C1833511,OMIM:600649,Orphanet:ORPHA228305;MedGen:C1833518,OMIM:608836,Orphanet:ORPHA228308;MedGen:C1833508,OMIM:255110,Orphanet:ORPHA228302;MedGen:CN517202 Carnitine palmitoyltransferase II deficiency, infantile;Carnitine palmitoyltransferase II deficiency, lethal neonatal;Carnitine palmitoyltransferase II deficiency, myopathic, stress-induced;not provided germline;unknown 1 53210044 GGACCCTGGTTTGATATGTACCTATCTGCTCGAGACTCCGTTGTTCTGAACTTTAATCCAT 587776960 59478 NM_001001937.1(ATP5F1A):c.985C>T (p.Arg329Cys) ATP5F1A May 15, 2013 MedGen:C3808899,OMIM:615228 Mitochondrial complex v (atp synthase) deficiency, nuclear type 4 germline 18 46087199 GTTGCTTACCGTCAGATGTCTCTGTTGCTCCGCCGACCCCCTGGTCGTGAGGCCTATCCTG 121908409 20237 NM_054027.4(ANKH):c.14C>T (p.Pro5Leu) ANKH Oct 01, 2002 MedGen:C0856830,OMIM:118600 Chondrocalcinosis 2 germline 5 14871434 AGCCCACGGCGGGGACTATGGTGAAATTCCCGGCGCTCACGCACTACTGGCCCCTGATCCG 397518460 94271 NM_013335.3(GMPPA):c.295C>T (p.Arg99Ter) GMPPA Oct 03, 2013 MedGen:C3809738,OMIM:615510 Alacrima, achalasia, and mental retardation syndrome germline 2 219501903 CTAGGCACAGGGGGTGGTCTTTACCATTTTCGAGACCAGATCCTGGCTGGGAGCCCCGAGG 111033737 36562 NM_000155.3(GALT):c.610C>T (p.Arg204Ter) GALT Sep 03, 2014 MedGen:C0268151,OMIM:230400,Orphanet:ORPHA79239,SNOMED CT:124354006 Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase germline;unknown 9 34648379 TTCCTGCCAGATATTGCCCAGCGTGAGGAGCGATCTCAGCAGGCCTATAAGAGTCAGCATG 104894927 25590 NM_006915.2(RP2):c.358C>T (p.Arg120Ter) RP2 Jan 01, 2015 Human Phenotype Ontology:HP:0000556,MedGen:C0854723,Orphanet:ORPHA71862,SNOMED CT:314407005;MedGen:C2681923,OMIM:312600 Retinal dystrophy;Retinitis pigmentosa 2 unknown X 46853731 TGCACATTAGCCTGCCAACAATTTCGTGTGCGAGATTGTAGAAAGCTGGAAGTCTTTTTGT 121908002 18878 NM_016123.3(IRAK4):c.877C>T (p.Gln293Ter) IRAK4 Dec 01, 2006 MedGen:C1843256,OMIM:607676,Orphanet:ORPHA70592 IRAK4 deficiency germline 12 43778238 CTTTCTTGGCACATGAGATGCAAGATTGCTCAGGGTGCAGCTAATGGCATCAATTTTCTAC 876658166 235282 NM_024675.3(PALB2):c.1378C>T (p.Gln460Ter) PALB2 Apr 07, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 16 23635168 AATTTAAACCTTTCCAATGAGGAAACTGACCAAAGTGAAATTAGGATGTCTGGCACATGCA 1057519296 361799 NM_138773.3(SLC25A46):c.425C>T (p.Thr142Ile) SLC25A46 Jan 14, 2017 MedGen:C4225302,OMIM:616505 NEUROPATHY, HEREDITARY MOTOR AND SENSORY, TYPE VIB germline 5 110746309 ATGCTCAGCATTACCATCTCACTCCATTTACAGTCATCAATATTATGTACAGTTTCAACAA 180177097 132093 NM_024675.3(PALB2):c.1027C>T (p.Gln343Ter) PALB2 Aug 04, 2017 MedGen:CN068448;MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C0027672,SNOMED CT:699346009;MedGen:C3150547,OMIM:613348 Breast cancer, susceptibility to;Familial cancer of breast;Hereditary cancer-predisposing syndrome;Pancreatic cancer 3 germline 16 23635519 ACCTACAATAACTTACCAGCAAATGAAAACCAAAACTTAAAAGAACAAAATCAAACAGAGA 397514763 75612 NM_002295.5(RPSA):c.172C>T (p.Leu58Phe) RPSA May 24, 2013 MedGen:C1849084,OMIM:271400 Asplenia, isolated congenital germline 3 39408644 ATCATAAATCTCAAGAGGACCTGGGAGAAGCTTCTGCTGGCAGCTCGTGCAATTGTTGCCA 1085307371 414333 NM_001204.6(BMPR2):c.1969C>T (p.Q657*) BMPR2 - MedGen:C0152171,OMIM:178600,SNOMED CT:26174007 Primary pulmonary hypertension germline 2 202555634 CAGTCAATTGGGCCAACCCCTGTCTGCTTACAGCTGACAGAAGAAGACTTGGAAACCAACA 267606751 15470 NM_020312.3(COQ9):c.730C>T (p.Arg244Ter) COQ9 Jun 07, 2016 MedGen:C3553374,OMIM:614654,Orphanet:ORPHA319678 Coenzyme Q10 deficiency, primary, 5 germline 16 57459583 GTTTCTTTACAGTTTAACTGGTACACCCGCCGAGCCATGCTGGCTGCCATCTACAACACAA 370879515 269903 NM_000486.5(AQP2):c.763C>T (p.Gln255Ter) AQP2 Jan 21, 2016 MedGen:C1563705,OMIM:304800 Nephrogenic diabetes insipidus, X-linked germline 12 49955555 GATTGGGAGGAGCGCGAGGTGCGACGGCGGCAGTCGGTGGAGCTGCACTCGCCGCAGAGCC 587778787 76758 NM_000784.3(CYP27A1):c.1402C>T (p.Pro468Ser) CYP27A1 Aug 01, 2013 MedGen:C0238052,OMIM:213700,Orphanet:ORPHA909,SNOMED CT:63246000 Cholestanol storage disease not provided 2 218814683 CCCAGGATCCAGCACCCATTTGGCTCTGTGCCCTTTGGCTATGGGGTCCGGGCCTGCCTGG 746681765 359147 NM_138773.3(SLC25A46):c.1018C>T (p.Arg340Cys) SLC25A46 Jan 14, 2017 MedGen:C4225302,OMIM:616505 NEUROPATHY, HEREDITARY MOTOR AND SENSORY, TYPE VIB germline 5 110761543 ATACTTTACCCATTGGAAACAGTTTTGCACCGCCTTCACATTCAAGGAACACGCACAATAA 80338908 24332 NM_000459.4(TEK):c.2545C>T (p.Arg849Trp) TEK Aug 23, 2012 MedGen:C1838437,OMIM:600195,Orphanet:ORPHA2451 Multiple Cutaneous and Mucosal Venous Malformations unknown 9 27206762 CTTAAGGCGCGCATCAAGAAGGATGGGTTACGGATGGATGCTGCCATCAAAAGAATGAAAG 267606648 33299 NM_013411.4(AK2):c.307C>T (p.Arg103Trp) AK2 Jan 01, 2009 MedGen:C0272167,OMIM:267500,Orphanet:ORPHA33355,SNOMED CT:111584000 Reticular dysgenesis germline 1 33021616 AAAAATGGTTTTCTTCTGGATGGCTTCCCTCGGACTGTGAGGCAGGCAGAAATGGTGGGTA 147103714 98502 NM_000182.4(HADHA):c.157C>T (p.Arg53Ter) HADHA Jun 02, 2017 MedGen:CN074230,OMIM:609016;MedGen:C0342786,OMIM:609015,SNOMED CT:237999008 Long-chain 3-hydroxyacyl-CoA dehydrogenase deficiency;Mitochondrial trifunctional protein deficiency germline 2 26238957 TATGGAGTCAAAGGGGATGTGGCAGTTGTTCGAATTAACTCTCCCAATTCAAAGGTATCTC 121912601 17384 NM_016341.3(PLCE1):c.1477C>T (p.Arg493Ter) PLCE1 Dec 01, 2006 MedGen:C1853124,OMIM:610725 Nephrotic syndrome, type 3 germline 10 94132444 CTTCTCAGTACTTTTGGAGGATCCACTGGACGAATGATGCTGAAAGGTAATGCCTGAAATT 587783490 169235 NM_004380.2(CREBBP):c.4078C>T (p.Arg1360Ter) CREBBP Feb 08, 2013 MedGen:C0035934,OMIM:180849,Orphanet:ORPHA353277,SNOMED CT:45582004 Rubinstein-Taybi syndrome germline 16 3740454 AATCACCCTGAAGCCGGGGAGGTTTTTGTCCGAGTGGTGGCCAGCTCAGACAAGACGGTGG 74315379 27453 NM_001001430.2(TNNT2):c.421C>T (p.Arg141Trp) TNNT2 May 30, 2017 Human Phenotype Ontology:HP:0001638,MedGen:C0878544,Orphanet:ORPHA167848,SNOMED CT:85898001;MedGen:C1861864,OMIM:115195;MedGen:C1832243,OMIM:601494;EFO:EFO_0000407,Human Phenotype Ontology:HP:0001644,MedGen:C0007193,Orphanet:ORPHA217604,SNOMED CT:195021004;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Cardiomyopathy;Familial hypertrophic cardiomyopathy 2;Left ventricular noncompaction 6;Primary dilated cardiomyopathy;Primary familial hypertrophic cardiomyopathy;not provided germline 1 201364336 CGGGCAGAGCGGGCCGAGCAGCAGCGCATCCGGAATGAGCGGGAGAAGGAGCGGCAGAACC 199624796 152914 NM_022089.3(ATP13A2):c.490C>T (p.Arg164Trp) ATP13A2 - MedGen:C1847640,OMIM:606693,Orphanet:ORPHA306674 Parkinson disease 9 biparental;inherited 1 17004399 CTCCTCTCTCCCACCCAGAAGCGGGTGCTGCGGTATTACCTCTTCCAGGGCCAGCGCTATA 104886213 35941 NM_000495.4(COL4A5):c.3181C>T (p.Gln1061Ter) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108626284 GGACAACCTGGCTCCCCAGGATTACCTGGACAGAAAGGCGACAAAGGTGATCCTGGTATTT 886041858 264073 NM_015025.3(MYT1L):c.1699C>T (p.Arg567Ter) MYT1L Jul 18, 2016 MedGen:CN517202 not provided germline 2 1912024 GGGCATGTCAACAGCAACAGGAACTCCCACCGAAGGTAAGCCACGCGTGGGTCACTGGTGT 80338708 33997 NM_000303.2(PMM2):c.710C>T (p.Thr237Met) PMM2 Aug 24, 2017 MedGen:C0349653,OMIM:212065,Orphanet:ORPHA79318,SNOMED CT:277893002;MedGen:CN517202 Carbohydrate-deficient glycoprotein syndrome type I;not provided germline;unknown 16 8847794 TGGGCTACTCCGTGACAGCGCCTGAGGACACGCGCAGGATCTGTGAACTGCTGTTCTCCTA 28939679 22550 NM_002496.3(NDUFS8):c.236C>T (p.Pro79Leu) NDUFS8 Jul 22, 2016 MedGen:C1838979,OMIM:252010;MedGen:CN517202 Mitochondrial complex I deficiency;not provided germline 11 68033147 GCATGACCCTGAGCTACCTGTTCCGGGAACCGGCCACCATCAACTACCCGTTCGAGAAGGG 754391973 226531 NM_001142763.1(PCDH15):c.2986C>T (p.Arg996Ter) PCDH15 Aug 28, 2015 MedGen:C1832845,OMIM:601067 Usher syndrome, type 1D germline 10 53961790 GTGGAAGAAGATTCTGGAAGAGTAATAACACGAGTCAATCTTAATGAAGAACCTACAACAA 104894101 33302 NM_000476.2(AK1):c.382C>T (p.Arg128Trp) AK1 Jun 15, 1989 MedGen:C2675459,OMIM:612631,Orphanet:ORPHA86817 Adenylate kinase deficiency, hemolytic anemia due to germline 9 127868455 GTGGACGCAGGCCCTGAGACCATGACCCAGCGGCTCTTGAAACGTGGAGAGACCAGCGGGC 200561967 223315 NM_018297.3(NGLY1):c.622C>T (p.Gln208Ter) NGLY1 Jan 07, 2016 MedGen:C3808991,OMIM:615273,Orphanet:ORPHA404454 Congenital disorder of deglycosylation inherited 3 25751134 ATTCCGGTCCAAGAACTAAAAAGGAAATCACAAGAAAAGTTATCGAGAGCTAGAAAATTGG -1 458293 NM_004260.3(RECQL4):c.925C>T (p.Gln309Ter) RECQL4 Apr 21, 2017 MedGen:C0265308,OMIM:218600,Orphanet:ORPHA1225,SNOMED CT:77608001 Baller-Gerold syndrome germline 8 144516194 CCAGGGGAACCTGTACAGGCACAGCCACCTCAGCCCTGCAGCAGCCCATCGAACCCCAGGT -1 432100 NM_001008537.2(NEXMIF):c.964C>T (p.Arg322Ter) NEXMIF Sep 13, 2017 MedGen:C3806730,OMIM:300912,Orphanet:ORPHA85277 Mental retardation, X-linked 98 germline X 74743593 ATTCGATATGAATCCTTTCAGGACAATGTTCGAGACAAGACTACTCTTTTGATGCAGGAAG 777668842 214252 NM_001134831.1(AHI1):c.1267C>T (p.Gln423Ter) AHI1 Sep 07, 2015 Human Phenotype Ontology:HP:0002335,MedGen:C0431399,Orphanet:ORPHA475,SNOMED CT:253175003,SNOMED CT:716997004;MedGen:C1837713,OMIM:608629;MedGen:CN517202 Joubert syndrome;Joubert syndrome 3;not provided germline;unknown 6 135455811 TTAAAATCAAGACTTCCAGAGTGGGAAGAACAAATTGTATTTAATGAAAATTTTCCCTATT 80359210 67493 NM_000059.3(BRCA2):c.9376C>T (p.Gln3126Ter) BRCA2 Nov 08, 2016 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome germline 13 32394808 CCTCATATGTTAATTGCTGCAAGCAACCTCCAGTGGCGACCAGAATCCAAATCAGGCCTTC 201620629 185944 NM_004608.3(TBX6):c.844C>T (p.Arg282Ter) TBX6 Nov 15, 2015 MedGen:C1852521,OMIM:122600 Spondylocostal dysostosis 5 germline 16 30086847 TCATCATCACCACCACTGTTCCCCAGGGAGCGAGACGCCCGTGTGAAGAGGAAACTGCGGG 869312833 226507 NM_015100.3(POGZ):c.3001C>T (p.Arg1001Ter) POGZ Mar 23, 2016 MedGen:C4225351,OMIM:616364,Orphanet:ORPHA468678;MedGen:CN517202 White-sutton syndrome;not provided germline 1 151406034 CAGGCAGCTGAACACTTCCGAAATCCCCAGCGACGTATTCGCCGTTGGCTTCGACGTTTCC 769896492 214064 NM_000287.3(PEX6):c.1930C>T (p.Arg644Trp) PEX6 Oct 01, 2015 MedGen:C4225267,OMIM:616617 Heimler syndrome 2 germline 6 42966813 GATCTCTATGCCCTTCTGACCCACAGCAGCCGGGCAGCCTGCACCAGGATCAAGAACTCAG 119456964 17677 NM_153240.4(NPHP3):c.3340C>T (p.Gln1114Ter) NPHP3 Apr 01, 2008 MedGen:C2673883,OMIM:208540,Orphanet:ORPHA294415 Renal-hepatic-pancreatic dysplasia germline 3 132684784 TTTTGGGATTGTGTTCACAGAACAGCTGACCAGTTTCTGAAGCGTTCCTTAGAAATGAGGG 767215758 188057 NM_002485.4(NBN):c.1030C>T (p.Gln344Ter) NBN Sep 21, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0398791,OMIM:251260,Orphanet:ORPHA647,SNOMED CT:234638009;MedGen:C0398791,OMIM:251260,Orphanet:ORPHA647,SNOMED CT:234638009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Microcephaly, normal intelligence and immunodeficiency;Microcephaly, normal intelligence and immunodeficiency;not provided germline;maternal;paternal;unknown 8 89958819 AAGACAACAACTCCAGGACCAAGCCTTTCACAAGGCGTGTCAGTTGATGAAAAACTAATGC 397514686 57811 NM_032415.5(CARD11):c.2833C>T (p.Gln945Ter) CARD11 May 01, 2013 MedGen:C3554686,OMIM:615206,Orphanet:ORPHA357237 Immunodeficiency 11 germline 7 2915243 CTGGACGCCACCAAGCTCTTGACTGAGAAGCAGGAAGGTACATGGGGACCGCCTGGCCCCT 104894267 31731 NM_130799.2(MEN1):c.1378C>T (p.Arg460Ter) MEN1 Nov 23, 2016 MedGen:C0027672,SNOMED CT:699346009;MeSH:D018761,MedGen:C0025267,OMIM:131100,Orphanet:ORPHA652,SNOMED CT:30664006;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Multiple endocrine neoplasia, type 1;not provided germline 11 64804789 CAGGTGCGGCAGAAGGTGCGCATAGTGAGCCGAGAGGCCGAGGCGGCCGAGGCCGAGGAGC 80338855 34126 NM_001360.2(DHCR7):c.506C>T (p.Ser169Leu) DHCR7 Jun 14, 2015 MedGen:C0175694,OMIM:270400,Orphanet:ORPHA818,SNOMED CT:43929004 Smith-Lemli-Opitz syndrome unknown 11 71441347 TTGCAAACGCTCATCTCCTGTCCTGGTTCTCGCCCACCATCATCTTCGACAACTGGATCCC 121912759 32822 NM_000342.3(SLC4A1):c.2603C>T (p.Pro868Leu) SLC4A1 Jul 15, 1993 MedGen:C4015904 Acanthocytosis due to band 3 ht germline 17 44251211 CCCTGCCCTTCGTCCTCATCCTCACTGTGCCGCTGCGGCGCGTCCTGCTGCCGCTCATCTT 768090444 267496 NM_000070.2(CAPN3):c.2242C>T (p.Arg748Ter) CAPN3 May 23, 2016 MedGen:C1869123,OMIM:253600,Orphanet:ORPHA267 Limb-girdle muscular dystrophy, type 2A germline 15 42410645 CAGTCCGGCACCATCAACAGCTACGAGATGCGAAATGCAGTCAACGACGCAGGTGCTGAGA 730880544 179309 NM_000256.3(MYBPC3):c.1522C>T (p.Gln508Ter) MYBPC3 Sep 01, 2016 MedGen:CN517202 not provided germline 11 47342680 ACCTTCAAATACCGGTTCAAGAAGGACGGGCAGAGACACCACCTGATCATCAACGAGGCCA 398123532 99360 NM_001005741.2(GBA):c.625C>T (p.Arg209Cys) GBA Jul 18, 2012 MedGen:C1961835,OMIM:230800,SNOMED CT:62201009 Gaucher's disease, type 1 germline 1 155238270 CTGATTCACCGAGCCCTGCAGTTGGCCCAGCGTCCCGTTTCACTCCTTGCCAGCCCCTGGA -1 440239 NM_004766.2(COPB2):c.760C>T (p.Arg254Cys) COPB2 Dec 07, 2017 MedGen:CN677079,OMIM:617800 MICROCEPHALY 19, PRIMARY, AUTOSOMAL RECESSIVE germline 3 139373800 GTATTTACATTGTTCTTTTTAGGAACAGTACGTATTTGGCATTCAAGCACCTACCGGCTTG -1 485409 NM_007194.3(CHEK2):c.100C>T (p.Gln34Ter) CHEK2 Feb 21, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 22 28734622 AGCGTTACCCAGTCCCAAGGCTCCTCCTCACAGTCCCAGGGCATATCCAGCTCCTCTACCA 72657321 240040 NM_001277115.1(DNAH11):c.4438C>T (p.Arg1480Ter) DNAH11 Mar 22, 2017 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244 Ciliary dyskinesia germline 7 21620016 ACCATGAAGTTTTCTTACGAAGTTCACTATCGAACAGGCATTCCATTACTAAAGTCTGATG 370627877 267083 NM_001101426.3(ISPD):c.643C>T (p.Gln215Ter) ISPD Aug 19, 2015 MedGen:C3553330,OMIM:614643 Congenital muscular dystrophy-dystroglycanopathy with brain and eye anomalies, type A7 germline 7 16376133 CGTGCCAGACACAGAGCAAGTGAAATGCCCCAAGCTTTTCTATTTGATGTGATTTATGAAG 28942096 18429 NM_147196.2(TMIE):c.241C>T (p.Arg81Cys) TMIE Sep 01, 2002 MedGen:C1832992,OMIM:600971 Deafness, autosomal recessive 6 germline 3 46709155 GTCATCACGCTGTGCTGTGTCTTCAACTGTCGTGTGCCACGGACCCGGAAGGAGATCGAAG 369384363 48460 NM_001080414.3(CCDC88C):c.934C>T (p.Arg312Ter) CCDC88C Dec 18, 2012 MedGen:C0020255,OMIM:236600,SNOMED CT:230745008 Hydrocephalus germline 14 91338121 GCGGCAGACGCCCGGTCTGCTCGTGCCTATCGAGACGAGCTGGATTCCCTGCGGGAGAAGG 141577476 152364 NM_000535.6(PMS2):c.88C>T (p.Gln30Ter) PMS2 Oct 06, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Lynch syndrome;not provided germline 7 6005967 CGGAAGTCAGTCCATCAGATTTGCTCTGGGCAGGTGGTACTGAGTCTAAGCACTGCGGTAA 587777138 106538 NM_024790.6(CSPP1):c.2320C>T (p.Arg774Ter) CSPP1 Jan 02, 2014 MedGen:C3810212,OMIM:615636 Joubert syndrome 21 germline 8 67158540 GAAGAAAGACGGCTTGCAGAACAGAGGGCACGAATTCAGCAGGAGTATGAAGAGGAACAGG 768384031 232143 NM_007194.3(CHEK2):c.205C>T (p.Gln69Ter) CHEK2 Jan 05, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline 22 28734517 ACACTGAGCTCCTTAGAGACAGTGTCCACTCAGGAACTCTATTCTATTCCTGAGGACCAAG 794726730 187817 NM_001165963.1(SCN1A):c.2134C>T (p.Arg712Ter) SCN1A Jul 14, 2017 MedGen:C0393706,Orphanet:ORPHA1934;MedGen:C1858673,OMIM:604403;MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002;MedGen:CN517202 Early infantile epileptic encephalopathy;Generalized epilepsy with febrile seizures plus, type 2;Severe myoclonic epilepsy in infancy;not provided de novo;germline 2 166042334 GACTTTCTAGAAGATCCTTCCCAAAGGCAACGAGCAATGAGTATAGCCAGCATTCTAACAA 786205703 188295 NM_001242896.1(DEPDC5):c.418C>T (p.Gln140Ter) DEPDC5 Apr 13, 2016 Gene:50987,MedGen:C1858477,OMIM:604364 Epilepsy, familial focal, with variable foci 1 germline 22 31778103 AATAACTTGTGTGTGTATTCTTTCAGAGCACAGGCTGGTGAACTGTGGGTTAAGAATGAGA 104894629 21562 NM_018129.3(PNPO):c.685C>T (p.Arg229Trp) PNPO Apr 15, 2005 MedGen:C1864723,OMIM:610090,Orphanet:ORPHA79096 Pyridoxal 5'-phosphate-dependent epilepsy germline 17 47946681 TGGCAAGGTCAAACCAACCGCCTGCATGACCGGATAGTCTTTCGGCGGGGCCTACCCACAG 774294963 481748 NM_014845.5(FIG4):c.793C>T (p.Arg265Ter) FIG4 Dec 26, 2017 MedGen:CN517202 not provided germline 6 109741461 CTTGATTTCCAAGAGCTGTTGATCTATGGACGACCAGTGTATGTCACTCTAATAGCTAGAA 63750857 96471 NM_000251.2(MSH2):c.2536C>T (p.Gln846Ter) MSH2 Sep 05, 2013 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Lynch syndrome germline 2 47480773 TTCCCTAAGCATGTAATAGAGTGTGCTAAACAGAAAGCCCTGGAACTTGAGGAGTTTCAGT 5030858 15616 NM_000277.2(PAH):c.1222C>T (p.Arg408Trp) PAH Aug 07, 2017 MedGen:C0031485,OMIM:261600,Orphanet:ORPHA716,SNOMED CT:154735006;MedGen:CN517202 Phenylketonuria;not provided germline;unknown 12 102840493 GGTCTTAGGAACTTTGCTGCCACAATACCTCGGCCCTTCTCAGTTCGCTACGACCCATACA 768521444 444003 NM_004415.3(DSP):c.250C>T (p.Arg84Ter) DSP Aug 17, 2017 MedGen:CN517202 not provided germline 6 7555797 CTGCTGCAGAACTGCTCCGACTGCTTGATGCGAGCAGAGCTCATCGTGCAGCCTGTAAGCT 886037841 244104 NM_001161563.2(TNIK):c.538C>T (p.Arg180Ter) TNIK Jul 26, 2016 MedGen:C4310755,OMIM:617028 Mental retardation, autosomal recessive 54 germline 3 171188803 GTGGACTTTGGAGTCAGTGCTCAGCTTGATCGAACAGTGGGCAGGAGGAATACTTTCATTG 587777872 166441 NM_017696.2(MCM9):c.394C>T (p.Arg132Ter) MCM9 Dec 04, 2014 MedGen:C4015409,OMIM:616185,Orphanet:ORPHA444048;MedGen:C2749126,OMIM:311360 Ovarian dysgenesis 4;Premature ovarian failure 1 germline;inherited 6 118924038 CACTTTTTATCTGTCACTGGGACAGTGATTCGAACAAGTCTGGTGAAGGTTCTGGAGTTTG 121909078 22384 NM_004637.5(RAB7A):c.385C>T (p.Leu129Phe) RAB7A Mar 01, 2003 MedGen:C1833219,OMIM:600882,Orphanet:ORPHA99936;MedGen:CN517202 Charcot-Marie-Tooth disease, axonal, type 2b;not provided germline 3 128806576 CCATTTGTTGTGTTGGGAAACAAGATTGACCTCGAAAACAGACAAGTAAGTACCAACGATG 368631447 433515 NM_001080463.1(DYNC2H1):c.10163C>T (p.Pro3388Leu) DYNC2H1 Jun 01, 2017 MedGen:CN674505;MedGen:CN169374 Short-rib polydactyly syndrome type III;not specified germline;maternal;paternal;unknown 11 103253384 CAACAAGAAACCCAAATCCTTTTATTCCACCGGATGCAGCTTCCATTGTTACTGAGGTTAA 776800006 446212 NM_001042472.2(ABHD12):c.874C>T (p.Arg292Ter) ABHD12 Oct 16, 2017 MedGen:CN517202 not provided germline 20 25306909 AAATGGTTTCCATCTTGTCTCCAGATATATCGATACTTCCCTGGGTTTGACTGGTTCTTCC 137853218 31040 NM_002890.2(RASA1):c.853C>T (p.Arg285Ter) RASA1 May 01, 2008 MedGen:C2675370 Capillary malformation without arteriovenous malformation germline 5 87333291 TTCTAGCCAGTAGAAGATAGAAGGCGTGTACGAGCTATTCTACCTTACACAAAAGTACCAG 876659900 233487 NM_000535.6(PMS2):c.2137C>T (p.Gln713Ter) PMS2 Dec 27, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 7 5982861 ACGGACGAGAAGTATAACTTCGAGATGCTGCAGCAGCACACCGTGCTCCAGGGGCAGAGGC 104893918 19130 NM_000112.3(SLC26A2):c.2144C>T (p.Ala715Val) SLC26A2 Feb 01, 1996 MedGen:C1850554,OMIM:256050,Orphanet:ORPHA56304 Atelosteogenesis type 2 germline 5 149981737 AAAACCTTCTCTTCTATAGTGTGTATGAAGCGATGGCTTTTGCAGAAGTATCTAAAAATCA 61755806 28203 NM_000322.4(PRPH2):c.647C>T (p.Pro216Leu) PRPH2 May 20, 2015 MedGen:C1842475,OMIM:608133;MedGen:CN517202 Retinitis pigmentosa 7;not provided germline 6 42704546 TGGACGGCGTCCCTTTCAGCTGCTGCAATCCTAGCTCGCCACGGCCCTGCATCCAGTATCA 80356683 29594 NM_005562.2(LAMC2):c.283C>T (p.Arg95Ter) LAMC2 Jun 06, 2015 MedGen:C0079683,OMIM:226700,Orphanet:ORPHA79404,SNOMED CT:400140006 Junctional epidermolysis bullosa gravis of Herlitz germline;unknown 1 183215467 ACCTTGTGGGTTTCAGGTTCTCTTAGTGCTCGATGTGACAACTCCGGACGGTGCAGCTGTA 398123126 98273 NM_000048.3(ASL):c.544C>T (p.Arg182Ter) ASL Mar 28, 2017 MedGen:C0268547,OMIM:207900,Orphanet:ORPHA23,SNOMED CT:41013004;MedGen:CN517202 Argininosuccinate lyase deficiency;not provided germline 7 66086763 GCTTCCCACAGCCACGCCGTGGCACTGACCCGAGACTCTGAGCGGCTGCTGGAGGTGCGGA 180177356 71289 NM_017890.4(VPS13B):c.2074C>T (p.Arg692Ter) VPS13B May 26, 2015 MedGen:C0265223,OMIM:216550,Orphanet:ORPHA193,SNOMED CT:56604005;MedGen:CN517202 Cohen syndrome;not provided germline 8 99156609 TTCCAGTCTCTTCGGCCTTTGCCATCCATTCGAATATTGGTGGATAAAATTAATCTGGAAC 121913618 29178 NM_002470.3(MYH3):c.2014C>T (p.Arg672Cys) MYH3 May 01, 2006 MedGen:C0265224,OMIM:193700,SNOMED CT:52616002 Freeman-Sheldon syndrome germline 17 10641318 AATTTAAGAACTACTCACCCTCATTTTGTGCGTTGTATAATTCCCAATGAAACCAAAACTC 886043247 270133 NM_000321.2(RB1):c.1510C>T (p.Gln504Ter) RB1 Jan 28, 2016 Human Phenotype Ontology:HP:0009919,MeSH:D012175,MedGen:C0035335,OMIM:180200,Orphanet:ORPHA790 Retinoblastoma germline 13 48381258 TTTTTTTTTTCATTTTTAGGAAGTACATCTCAGAATCTTGATTCTGGAACAGATTTGTCTT 1064793000 404656 NM_015318.3(ARHGEF18):c.1522C>T (p.Arg508Ter) ARHGEF18 Apr 07, 2017 MedGen:CN241844,OMIM:617433 Retinitis pigmentosa 78 germline 19 7462259 ATGGGCGGCCTCGAAGACCTGCCCCAGCCCCGAGGCCTATTCCGTGGAGGGGACCCATCCG 281860290 46969 NM_018713.2(SLC30A10):c.922C>T (p.Gln308Ter) SLC30A10 Aug 30, 2012 OMIM:613280 Hypermanganesemia with dystonia 1 not provided 1 219918291 CTTATCAAGGAGACCGCTGCCATTCTGCTACAGATGGTCCCAAAAGGAGTCAACATGGAAG 587777876 165480 NM_000166.5(GJB1):c.77C>T (p.Ser26Leu) GJB1 Dec 30, 2016 MedGen:CN118851;MedGen:C0393808,OMIM:302800,Orphanet:ORPHA101075,SNOMED CT:230552007;MedGen:CN517202 Charcot-Marie-Tooth Neuropathy X;X-linked hereditary motor and sensory neuropathy;not provided germline X 71223784 ATTCTACTGCCATTGGCCGAGTATGGCTCTCGGTCATCTTCATCTTCAGAATCATGGTGCT 11570112 179222 NM_000256.3(MYBPC3):c.2992C>T (p.Gln998Ter) MYBPC3 Apr 21, 2014 MedGen:CN517202 not provided germline 11 47333924 GGGGAGCCTGTGAACCTTCTCATCCCTTTCCAGGTGGGACTGGCCCCCTTCCCTGTCCCCC 121909063 22061 NM_005422.2(TECTA):c.5668C>T (p.Arg1890Cys) TECTA Jun 01, 2006 MedGen:C1832187,OMIM:601543 Deafness, autosomal dominant 12 germline 11 121168135 AACAACACTGGCAACATCATCACCAGGGACCGCACGATCAATGTGGAATTTTCATGTGCTT 876661305 188288 NM_002582.3(PARN):c.529C>T (p.Gln177Ter) PARN May 01, 2015 MedGen:C4225347,OMIM:616371 Pulmonary fibrosis and/or bone marrow failure, telomere-related, 4 germline 16 14610669 TCAAAATGTCCTGTCACGATTCCTGAGGATCAAAAGAAGTTTATTGACCAAGTGGTGTAAG 863224993 213868 NM_004006.2(DMD):c.3427C>T (p.Gln1143Ter) DMD Jun 30, 2012 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Duchenne muscular dystrophy germline X 32463444 GAACTTAACACTCAGTGGGATCACATGTGCCAACAGGTATAGACAATCTCTTTCACTGTGG 191295403 422115 NM_000303.2(PMM2):c.367C>T (p.Arg123Ter) PMM2 May 01, 2017 MedGen:CN517202 not provided germline 16 8811098 TTCATTCCCAGGGGTACTTTCATTGAATTCCGAAATGGGATGTTAAACGTGTCCCCTATTG 1057524677 375928 NM_001170629.1(CHD8):c.1690C>T (p.Arg564Ter) CHD8 Apr 30, 2017 MedGen:CN517202 not provided germline 14 21426154 GATGTGGAAGTCATGCCTGCACAGTCACCTCGAGAAGATGAAGAAAGCAGCATTCAGGTAA 80359159 46763 NM_000059.3(BRCA2):c.9076C>T (p.Gln3026Ter) BRCA2 Apr 18, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline 13 32379872 TCTAAAAGTAAATCTGAAAGAGCTAACATACAGTTAGCAGCGACAAAAAAAACTCAGTATC 771961377 186639 NM_000642.2(AGL):c.118C>T (p.Gln40Ter) AGL Sep 22, 2017 MedGen:C0017922,OMIM:232400,Orphanet:ORPHA308684,SNOMED CT:66937008;MedGen:CN517202 Glycogen storage disease type III;not provided germline;unknown 1 99861538 GAGCTACAGTTCCGATTAGGCCCAACTTTACAGGGAAAAGCAGTTACCGTGTATACAAATT 80356771 19334 NM_000157.3(GBA):c.1504C>T (p.Arg502Cys) GBA Aug 25, 2017 MedGen:C0268250,OMIM:230900,Orphanet:ORPHA77260,SNOMED CT:12246008;MedGen:C0017205,Orphanet:ORPHA355;MedGen:C1961835,OMIM:230800,SNOMED CT:62201009;MedGen:C3160718,OMIM:168600,SNOMED CT:49049000;MedGen:C0268251,OMIM:231000,Orphanet:ORPHA77261,SNOMED CT:5963005;MedGen:CN517202 Acute neuronopathic Gaucher's disease;Gaucher disease;Gaucher's disease, type 1;Parkinson disease, late-onset;Subacute neuronopathic Gaucher's disease;not provided germline;unknown 1 155235196 GATGGCTCTGCTGTTGTGGTCGTGCTAAACCGGTGAGGGCAATGGTGAGGTCTGGGAAGTG 104893804 27859 NM_003106.3(SOX2):c.163C>T (p.Gln55Ter) SOX2 May 01, 2006 MedGen:C1859773,OMIM:206900,Orphanet:ORPHA77298 Microphthalmia syndromic 3 germline 3 181712523 ATGAATGCCTTCATGGTGTGGTCCCGCGGGCAGCGGCGCAAGATGGCCCAGGAGAACCCCA 866242631 259918 NM_020822.2(KCNT1):c.1420C>T (p.Arg474Cys) KCNT1 Jul 03, 2017 MedGen:CN517202 not provided germline 9 135768847 CCACCCCGCCAGGACCACCAGACCATCCTGCGCGCCTGGGCCGTGAAGGACTTCGCCCCCA 1064796919 409348 NM_001145358.1(SIN3A):c.2689C>T (p.Arg897Ter) SIN3A Mar 16, 2017 MedGen:CN517202 not provided germline 15 75392404 TATGTCAACAACAACTGGTATATTTTTATGCGACTGCACCAGATTCTCTGCCTGAGGCTGC 104894061 16212 NM_000497.3(CYP11B1):c.953C>T (p.Thr318Met) CYP11B1 Jul 01, 2009 MedGen:C0268292,OMIM:202010,Orphanet:ORPHA90795,SNOMED CT:124214007 Deficiency of steroid 11-beta-monooxygenase germline 8 142876242 CTATGGAACTCACTGCAGGGAGCGTGGACACGGTCAGGCCGGCAACCAGCCCCACCCAGAG 387907115 40077 NM_015175.2(NBEAL2):c.6299C>T (p.Pro2100Leu) NBEAL2 Jul 17, 2011 MedGen:C0272302,OMIM:139090,SNOMED CT:51720005 Gray platelet syndrome germline 3 47004976 CAGCCCCTGCTCGGGTGGGTGGCCAGTTCCCCTGGGTCCTGCAGGACTACGTGTCCCCAAC -1 481214 NM_017780.3(CHD7):c.2440C>T (p.Gln814Ter) CHD7 Oct 27, 2017 MedGen:C0265354,OMIM:214800,Orphanet:ORPHA138,SNOMED CT:47535005 CHARGE association maternal 8 60801591 AAAATTATGAGCAGTCGTTCAGTAAAAAAGCAGGTGAGTGCCATTGGAGCCATTAAAATCT 281875329 38544 NM_001614.3(ACTG1):c.766C>T (p.Arg256Trp) ACTG1 Dec 02, 2015 MedGen:C3281235,OMIM:614583;MedGen:CN517202 Baraitser-Winter Syndrome 2;not provided germline 17 81511224 CAGGTCATCACCATTGGCAATGAGCGGTTCCGGTGTCCGGAGGCGCTGTTCCAGCCTTCCT 137852614 24505 NM_000211.4(ITGB2):c.533C>T (p.Pro178Leu) ITGB2 Mar 15, 1992 MedGen:C0272187 Leukocyte adhesion deficiency germline 21 44901700 TCGGGTCCTTCGTGGACAAGACCGTGCTGCCGTTCGTGAACACGCACCCTGATAAGCTGCG -1 434925 NM_000944.4(PPP3CA):c.1333C>T (p.Gln445Ter) PPP3CA Jan 22, 2018 MedGen:CN547334,OMIM:617711 EPILEPTIC ENCEPHALOPATHY, INFANTILE OR EARLY CHILDHOOD, 1 germline 4 101032273 GGAGTACTTTCTGGAGGGAAGCAAACCCTGCAAAGCGGTAAGCAGGCTGATGGGTATGACT 80358763 66524 NM_000059.3(BRCA2):c.5404C>T (p.Gln1802Ter) BRCA2 Sep 08, 2016 MedGen:C2675520,OMIM:612555 Breast-ovarian cancer, familial 2 germline 13 32339759 TCCAATGTAAAAGATGCAAATGCATACCCACAAACTGTAAATGAAGATATTTGCGTTGAGG 769116796 432403 NM_003506.3(FZD6):c.346C>T (p.Arg116Ter) FZD6 Nov 24, 2017 MedGen:CN865585;MedGen:CN517202 Wilms Tumor;not provided germline;somatic 8 103318758 TGCAAAAAATTAATTGACACTTTTGGGATCCGATGGCCTGAGGAGCTTGAATGTGACAGGT 587777327 132613 NM_001080517.2(SETD5):c.3001C>T (p.Arg1001Ter) SETD5 Apr 03, 2014 MedGen:C3810406,OMIM:615761,Orphanet:ORPHA404440 Mental retardation, autosomal dominant 23 germline 3 9470735 AATGCTATGCCTCGAGCAGATGGACTGTATCGAGGATCTCCTCTAGTGGGGGATAGGAAGC 121918600 27996 NM_001035.2(RYR2):c.13489C>T (p.Arg4497Cys) RYR2 Apr 27, 2017 MedGen:C1631597,Orphanet:ORPHA3286;MedGen:C4053736,OMIM:604772;MedGen:CN517202 Catecholaminergic polymorphic ventricular tachycardia;Catecholaminergic polymorphic ventricular tachycardia type 1;not provided germline 1 237791441 AATGTTTTTCACCCTCAGAACTATTTTGCTCGCAACTTTTACAACATGAGAATGTTAGCCT 121434306 16863 NM_005767.5(LPAR6):c.463C>T (p.Gln155Ter) LPAR6 Mar 01, 2008 MedGen:C1848435,OMIM:278150 Hypotrichosis 8 germline 13 48411961 ATCGGAGGAAGTGCACCCGCCGTTTTTGTTCAGTCTACCCACTCTCAGGGTAACAATGCCT 863223532 209960 NM_000118.3(ENG):c.247C>T (p.Gln83Ter) ENG Aug 26, 2014 MedGen:CN517202 not provided germline 9 127829800 CAGGGCCCGTCACAGCTGGAGCTGACTCTCCAGGCATCCAAGCAAAATGGCACCTGGCCCC 121908006 18874 NM_000017.3(ACADS):c.973C>T (p.Arg325Trp) ACADS Aug 03, 2017 MedGen:C0342783,OMIM:201470,Orphanet:ORPHA26792,SNOMED CT:124166007;MedGen:CN517202 Deficiency of butyryl-CoA dehydrogenase;not provided germline 12 120738859 GCAGACATGGCCCTGGCCCTGGAGAGTGCCCGGCTGCTGACCTGGCGCGCTGCCATGCTGA 727503861 177254 NM_017780.3(CHD7):c.1369C>T (p.Gln457Ter) CHD7 Dec 11, 2013 MedGen:C0265354,OMIM:214800,Orphanet:ORPHA138,SNOMED CT:47535005 CHARGE association germline 8 60742801 CAGAGGAATATGGGCCCCAGAAACATGCAGCAGTCTCGTCCATTTATAGGCATGTCCTCGG 587776415 153696 NM_024675.3(PALB2):c.2074C>T (p.Gln692Ter) PALB2 Aug 28, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline 16 23630080 TCACATCCCAAAAGGCCAAACTCGCAAAGCCAGCATACAAAGACGGGCCTTTCTTCATCCA 121913331 239564 NM_000038.5(APC):c.3340C>T (p.Arg1114Ter) APC Jun 13, 2017 Human Phenotype Ontology:HP:0030078,MeSH:C538231,MedGen:C0152013;MeSH:D015179,MedGen:CN236642;MedGen:CN240755;MedGen:C2713442,OMIM:175100;MedGen:C0027672,SNOMED CT:699346009 Adenocarcinoma of lung;Colorectal Neoplasms;Familial adenomatous polyposis;Familial adenomatous polyposis 1;Hereditary cancer-predisposing syndrome germline;somatic 5 112838934 TCACGGGGAGCCAATGGTTCAGAAACAAATCGAGTGGGTTCTAATCATGGAATTAATCAAA 121917929 79397 NM_006920.4(SCN1A):c.1177C>T (p.Arg393Cys) SCN1A Aug 11, 2017 MedGen:C0393706,Orphanet:ORPHA1934;MedGen:C1858673,OMIM:604403;MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002;MedGen:CN517202 Early infantile epileptic encephalopathy;Generalized epilepsy with febrile seizures plus, type 2;Severe myoclonic epilepsy in infancy;not provided germline;unknown 2 166046970 TAATTCTGATATTTTTGTTTGCAGACATTACGTGCTGCTGGGAAAACGTACATGATATTTT 193929374 33928 NM_000162.3(GCK):c.1133C>T (p.Ala378Val) GCK Jul 05, 2011 MedGen:C1833104,OMIM:606176,Orphanet:ORPHA99885 Permanent neonatal diabetes mellitus not provided 7 44145617 GCCGCGCCTGCGAGAGCGTGTCTACGCGCGCTGCGCACATGTGCTCGGCGGGGCTGGCGGG 766169193 373190 NM_013382.5(POMT2):c.1762C>T (p.Arg588Ter) POMT2 Jan 11, 2017 MedGen:CN517202 not provided germline 14 77280044 CGCTTCTCAGGGGTCAATGACACAGATTTCCGAGTCTATCTGCTTGGCAACCCGGTGAGTG 76353203 32943 NM_000040.2(APOC3):c.55C>T (p.Arg19Ter) APOC3 Jun 12, 2015 MedGen:C0010068;MedGen:C3151467,OMIM:614028;MedGen:CN517202 Coronary heart disease;Hyperalphalipoproteinemia 2;not provided germline 11 116830637 GTTGCCCTCCTGGCGCTCCTGGCCTCTGCCCGTAAGCACTTGGTGGGACTGGGCTGGGGGC 769327864 193658 NM_001276378.1(LZTFL1):c.271C>T (p.Arg91Ter) LZTFL1 Feb 12, 2015 MedGen:C3714980,OMIM:615994 Bardet-Biedl syndrome 17 germline 3 45835591 CTACAGACAGACATCTCTGAACTTGAAAACCGGTAATAAAATTTGAACTTGCAACTGTGAC 751517725 214288 NM_153704.5(TMEM67):c.2290C>T (p.Arg764Ter) TMEM67 Feb 23, 2015 MedGen:C1853153,OMIM:610688 Joubert syndrome 6 unknown 8 93803652 TTTTATGAGAGATTTATAGAAGATAAAATTCGACAGTTCGTTGATTTATGCTCTATGAGTA 781371665 481844 NM_000368.4(TSC1):c.2380C>T (p.Gln794Ter) TSC1 Jan 10, 2018 MedGen:CN517202 not provided germline 9 132902616 CATGACCGAGAGGAATTCTACAACCAGAGCCAGGAATTACAGGTATAAACTGCAGCACCAG 878854417 243879 NM_020760.3(HECW2):c.3988C>T (p.Arg1330Trp) HECW2 Jan 10, 2018 MedGen:C4310643,OMIM:617268 Neurodevelopmental disorder with hypotonia, seizures, and absent language germline 2 196225800 CACCAGTATTTGTTGGATGCCTTCTTCACACGGCCCTTTTATAAGGCTCTTCTCAGAATGT 121434545 32654 NM_000070.2(CAPN3):c.328C>T (p.Arg110Ter) CAPN3 Apr 07, 1995 MedGen:C1869123,OMIM:253600,Orphanet:ORPHA267 Limb-girdle muscular dystrophy, type 2A germline 15 42384501 TTTGTTTCACAGGAAATTTGCGAGAATCCCCGATTTATCATTGATGGAGCCAACAGAACTG 750831299 211549 NM_007103.3(NDUFV1):c.365C>T (p.Pro122Leu) NDUFV1 Mar 26, 2013 MedGen:CN517202 not provided germline 11 67609490 ATCTGGTGGTGAACGCAGACGAGGGGGAGCCGGGCACCTGCAAGGACCGGGAGATCTTACG 121908661 21308 NM_002335.3(LRP5):c.1282C>T (p.Arg428Ter) LRP5 Nov 16, 2001 MedGen:C0432252,OMIM:259770,Orphanet:ORPHA2788,SNOMED CT:254112001 Osteoporosis with pseudoglioma germline 11 68386582 CCCGATGGCATCGCGGTCGACTGGGTGGCCCGAAACCTCTACTGGACCGACACGGGCACGG 1085307466 415621 NM_000455.4(STK11):c.904C>T (p.Gln302Ter) STK11 May 02, 2017 MedGen:CN517202 not provided germline 19 1221990 TACGAACCGGCCAAGAGGTTCTCCATCCGGCAGATCCGGCAGCACAGGTGAGCGGCCCCTG 606231153 19946 NM_022458.3(LMBR1):c.423+4909C>T LMBR1 Jul 01, 2009 MedGen:C1868114,OMIM:174500,Orphanet:ORPHA93336 Polydactyly, preaxial II germline 7 156791480 TCCCTTTTGGCAAACTTACATAAAAGTGACCTTGTACTGTATTTTATGACCAGATGACTTT 779422412 410166 NM_000789.3(ACE):c.412C>T (p.Gln138Ter) ACE Mar 10, 2017 MedGen:CN517202 not provided germline 17 63478093 GGCTCTGCCAACCTGCCCCTGGCTAAGCGGCAGCAGGTGGGCTGAGGGCTGAGGCAGAGCT 72558435 103197 NM_000531.5(OTC):c.725C>T (p.Thr242Ile) OTC - MedGen:CN517202 not provided unknown X 38408883 ACCAGCGTGTTTATGTATGCTAGAATGGTACCAAGCTGTTGCTGACAAATGATCCATTGGA 397516894 53977 NM_004333.4(BRAF):c.1720C>T (p.His574Tyr) BRAF Apr 02, 2013 MedGen:C1275081,Orphanet:ORPHA1340,SNOMED CT:403770008 Cardio-facio-cutaneous syndrome germline 7 140754208 TTCAGTTACTTACACGCCAAGTCAATCATCCACAGAGACCTCAAGAGTAATAGTATCCTTC 72653703 426925 NM_001171.5(ABCC6):c.2524C>T (p.Gln842Ter) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16177518 GCAGAGATGGGTTCCTACCAGGAGCTTCTGCAGAGGAAGGGGGCCCTCATGTGTCTTCTGG 397509338 70425 NM_007294.3(BRCA1):c.928C>T (p.Gln310Ter) BRCA1 Oct 18, 2016 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome germline 17 43094603 GAAAAGGCTGAATTCTGTAATAAAAGCAAACAGCCTGGCTTAGCAAGGAGCCAACATAACA 886041411 264537 NM_020529.2(NFKBIA):c.25C>T (p.Gln9Ter) NFKBIA Mar 12, 2016 MedGen:CN517202 not provided germline 14 35404620 CGCGCCATGTTCCAGGCGGCCGAGCGCCCCCAGGAGTGGGCCATGGAGGGCCCCCGCGACG 772468452 454545 NM_005732.3(RAD50):c.2116C>T (p.Arg706Ter) RAD50 Jun 05, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 5 132595719 GAAGTCATCAGTGATTTGCAGTCTAAACTGCGACTTGCTCCAGATAAACTCAAGTCAACAG 119481076 19914 NM_000197.1(HSD17B3):c.608C>T (p.Ala203Val) HSD17B3 Jan 23, 2015 MedGen:C0033804;MedGen:C0268296,OMIM:264300,Orphanet:ORPHA752,SNOMED CT:50658006 Pseudohermaphroditism;Testosterone 17-beta-dehydrogenase deficiency germline 9 96244393 GCCTCAGGTGTCTCTCCTTCTTGCTCCAGGCGTTTGTGTGCGCATTTTCCAAGGCCCTGCA 267607095 33445 NM_024592.4(SRD5A3):c.424C>T (p.Arg142Ter) SRD5A3 Jul 23, 2010 MedGen:C3150191,OMIM:612379,Orphanet:ORPHA324737 Congenital disorder of glycosylation type 1Q germline 4 55364133 GTGCTAGTATTTCTGTGGCTGCACAGCTTACGAAGACTCTTCGAGTGCCTCTACGTCAGTG 121913598 29224 NM_000530.7(MPZ):c.131C>T (p.Ser44Phe) MPZ Mar 26, 2015 MedGen:C1843251,OMIM:607677;MedGen:C0270912,OMIM:118200,Orphanet:ORPHA101082,SNOMED CT:42986003 Charcot-Marie-Tooth disease type 2I;Charcot-Marie-Tooth disease, demyelinating, type 1b germline 1 161307361 CCGACAGGGAGGTCCATGGTGCTGTGGGCTCCCGGGTGACCCTGCACTGCTCCTTCTGGTC 755253527 390687 NM_000152.4(GAA):c.1082C>T (p.Pro361Leu) GAA Oct 06, 2016 MedGen:C0017921,OMIM:232300,Orphanet:ORPHA365,SNOMED CT:124462004,SNOMED CT:237967002 Glycogen storage disease, type II germline 17 80108495 CATGAAGTCGGCGTTGGCCTGCAGGATACCCGTTCATGCCGCCATACTGGGGCCTGGGCTT 587777451 141333 NM_022068.3(PIEZO2):c.8056C>T (p.Arg2686Cys) PIEZO2 Jun 04, 2014 MedGen:C0796033,OMIM:248700,Orphanet:ORPHA2461 Marden-Walker syndrome de novo;germline 18 10671730 TCAGTTGTCCTTGTGATTGGGAAATTTGTCCGTGAATTCTTCAGTGGGATTTCTCACTCCA 386833986 71189 NM_007035.3(KERA):c.835C>T (p.Arg279Ter) KERA Apr 21, 2016 MedGen:C1857574,OMIM:217300 Cornea plana 2 germline 12 91055447 CTGTCGCACAATCAACTCACAAAGGTTCCCCGAATCAGTGCTCATCTGCAGCACCTTCACC 397514665 48772 NM_002335.3(LRP5):c.731C>T (p.Thr244Met) LRP5 Mar 14, 2013 MedGen:C0432252,OMIM:259770,Orphanet:ORPHA2788,SNOMED CT:254112001 Osteoporosis with pseudoglioma germline 11 68363791 AGGGCAGCCTGACGCACCCCTTCGCCCTGACGCTCTCCGGGGACACTCTGTACTGGACAGA 587777662 153792 NM_001288767.1(ARMC5):c.2062C>T (p.Arg688Trp) ARMC5 Jun 06, 2014 MedGen:C4014803,OMIM:615954 Acth-independent macronodular adrenal hyperplasia 2 germline 16 31464800 TTCGTGCGCAGCTATGGCGCGGCGCTGCTGCGGGCCTGGCTGGTGCTGGGGGTGGCGCCTG 587779139 96384 NM_000251.2(MSH2):c.2152C>T (p.Gln718Ter) MSH2 Apr 07, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Lynch syndrome;not provided germline 2 47476513 ATCTTAGCCCGAGTAGGGGCTGGTGACAGTCAATTGAAAGGAGTCTCCACGTTCATGGCTG 869312955 226901 NM_006772.2(SYNGAP1):c.3718C>T (p.Arg1240Ter) SYNGAP1 Oct 01, 2013 MeSH:D030342,MedGen:C0950123 Inborn genetic diseases germline 6 33446710 ACCAGCAAAATCCTGATGCAGTATCAGGCCCGACTGGAGCAGAGTGAGAAGAGGCTAAGGC 137854588 25962 NM_000397.3(CYBB):c.217C>T (p.Arg73Ter) CYBB Apr 07, 2016 MedGen:C1844376,OMIM:306400;MedGen:CN517202 Chronic granulomatous disease, X-linked;not provided germline X 37783565 AACTGCATGCTGATTCTCTTGCCAGTCTGTCGAAATCTGCTGTCCTTCCTCAGGGGTTCCA 886042478 267020 NM_000070.2(CAPN3):c.245C>T (p.Pro82Leu) CAPN3 Apr 04, 2017 MedGen:C1869123,OMIM:253600,Orphanet:ORPHA267;MedGen:CN517202 Limb-girdle muscular dystrophy, type 2A;not provided germline 15 42360050 AAGTTCTTTATGTGGACCCTGAGTTCCCACCGGATGAGACCTCTCTCTTTTATAGCCAGAA 104894391 31679 NM_000115.4(EDNRB):c.601C>T (p.Arg201Ter) EDNRB Mar 15, 2002 MedGen:C1838099,OMIM:600501 ABCD syndrome germline 13 77903356 AAATACAATTCTATTTTTATCTTCAGATATCGAGCTGTTGCTTCTTGGAGTAGAATTAAAG 72554640 209229 NM_000052.6(ATP7A):c.1933C>T (p.Arg645Ter) ATP7A Feb 08, 2013 MedGen:C0022716,OMIM:309400,Orphanet:ORPHA565,SNOMED CT:59178007 Menkes kinky-hair syndrome germline X 78011239 GATCGGTCAGCAAGTCACTTAGATCATAAACGAGAAATAAGACAGTAAGTACTTTGGAGTG 387907274 45746 NM_004960.3(FUS):c.868C>T (p.Gln290Ter) FUS Aug 10, 2012 MedGen:C3539195,OMIM:614782 Tremor, hereditary essential, 4 germline 16 31189158 GATAATTCAGACAACAACACCATCTTTGTGCAAGGCCTGGGTGAGAATGTTACAATTGAGT 1057520647 378193 NM_000167.5(GK):c.514C>T (p.Arg172Ter) GK Apr 15, 2015 MedGen:CN517202 not provided germline X 30694499 AGAAAAGTTCAAAAGGCCGTTGAAGAAAAACGAGCTCTTTTTGGGACTATTGATTCATGGC 748010262 185680 NM_030813.5(CLPB):c.1772C>T (p.Ala591Val) CLPB Sep 14, 2016 MedGen:C4225393,OMIM:616271,Orphanet:ORPHA445038 3-methylglutaconic aciduria with cataracts, neurologic involvement, and neutropenia germline 11 72294125 CAGGCATGCTTCTATCTGACCCATCTCAGGCCAAGCAAAGGCACAACATCACGCTGCTCTG 587777302 132073 NM_199189.2(MATR3):c.460C>T (p.Pro154Ser) MATR3 Mar 30, 2014 MedGen:C3807521,OMIM:606070 Amyotrophic lateral sclerosis 21 germline 5 139307875 CAGCTTAAAAGGAGGAGAACTGAAGAAGGCCCTACCTTGAGTTATGGTAGAGATGGCAGAT 794729144 198196 NM_001134363.2(RBM20):c.1183C>T (p.Gln395Ter) RBM20 Oct 27, 2014 MedGen:CN517202 not provided germline 10 110781792 GACCAGGCGTTGCTATCTGTGCGGCCCCTGCAGGCTCATGAGCTGAACGACTTTCACGGTG 145192716 361787 NM_016011.3(MECR):c.772C>T MECR Jan 07, 2017 MedGen:C4310634,OMIM:617282 Dystonia, childhood-onset, with optic atrophy and basal ganglia abnormalities germline 1 29200574 TTTGTTGTTTTCCAGGACATGCCCCAGCCACGGCTTGCTCTCAACTGTGTTGGTGGGAAAA 794726760 187726 NM_001165963.1(SCN1A):c.4997C>T (p.Ser1666Phe) SCN1A Jan 01, 2018 MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002 Severe myoclonic epilepsy in infancy de novo 2 165992278 TCCGCACGCTGCTCTTTGCTTTGATGATGTCCCTTCCTGCGTTGTTTAACATCGGCCTCCT 199690076 195771 NM_001177317.1(SLC34A3):c.575C>T (p.Ser192Leu) SLC34A3 Sep 30, 2017 MedGen:C0342645,OMIM:241530,SNOMED CT:237891005 Autosomal recessive hypophosphatemic bone disease germline;maternal 9 137233223 CTCTCTGCGGCCACAGGGCTTTCAGCGGCTCGGCGGTGCACGGGATCTTCAACTGGCTCAC 727503940 259817 NM_000806.5(GABRA1):c.640C>T (p.Arg214Cys) GABRA1 Mar 10, 2015 MedGen:CN517202 not provided germline 5 161882638 CGCTCAGTGGTTGTAGCAGAAGATGGATCACGTCTAAACCAGTATGACCTTCTTGGACAAA 104886207 35929 NM_000495.4(COL4A5):c.3046C>T (p.Gln1016Ter) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108625734 GGTCCCAAAGGTAACCCTGGTCTCCCTGGACAGCCAGGTCTTATAGGACCTCCTGGACTTA 587777448 141327 NM_022168.3(IFIH1):c.2335C>T (p.Arg779Cys) IFIH1 Jan 05, 2016 MedGen:C3888244,OMIM:615846;MedGen:CN517202 Aicardi-goutieres syndrome 7;not provided germline 2 162273914 AATGAACAAAAAGAAGTCATTAGTAAATTTCGCACTGGAAAAATAAATCTGCTTATCGCTA 121964890 27255 NM_000490.4(AVP):c.260C>T (p.Ser87Phe) AVP Nov 01, 1998 Human Phenotype Ontology:HP:0000863,MedGen:C0687720,OMIM:125700,Orphanet:ORPHA178029,SNOMED CT:45369008 Neurohypophyseal diabetes insipidus germline 20 3083039 AGGAGAACTACCTGCCGTCGCCCTGCCAGTCCGGCCAGAAGGCGTGCGGGAGCGGGGGCCG 780441716 410863 NM_001396.4(DYRK1A):c.691C>T (p.Arg231Ter) DYRK1A Feb 14, 2017 MedGen:CN517202 not provided germline 21 37490201 TCAGTGCATTTGAAACGCCACTTTATGTTTCGAAACCATCTCTGTTTAGTTTTTGAAATGC 758543580 361216 NM_207036.1(TCF12):c.1876C>T (p.Arg626Ter) TCF12 May 01, 2016 MedGen:C3715051,OMIM:615314 Craniosynostosis 3 paternal 15 57273160 GATATTAATGAAGCATTCAAAGAGCTTGGCCGAATGTGTCAGCTTCACTTGAAGAGTGAAA 137852852 17714 NM_182760.3(SUMF1):c.1033C>T (p.Arg345Cys) SUMF1 Mar 01, 2011 MedGen:C0268263,OMIM:272200,Orphanet:ORPHA585,SNOMED CT:54898003 Multiple sulfatase deficiency germline 3 4362236 CTCTCTACACAGTCTTATTGTTACAGGTATCGCTGTGCTGCTCGGAGCCAGAACACACCTG 397514510 48076 NM_001567.3(INPPL1):c.1975C>T (p.Pro659Ser) INPPL1 Feb 04, 2013 MedGen:C0432219,OMIM:258480,Orphanet:ORPHA2746,SNOMED CT:254068007 Opsismodysplasia germline 11 72233098 TCCTTAGGTGAGGAGGAGATCTCCTTCCCACCCACCTACCGCTATGAGCGGGGTTCCCGGG -1 470871 NM_033453.3(ITPA):c.304C>T (p.Gln102Ter) ITPA Aug 09, 2017 MedGen:C1840173,OMIM:613850 Inosine triphosphatase deficiency germline 20 3218525 AGCCCTCACTGCCCACCCGCAGGTCTCCACCAGCTCCTGGCCGGGTTCGAGGACAAGTCAG 104894023 29026 NM_000230.2(LEP):c.313C>T (p.Arg105Trp) LEP Mar 30, 2004 MedGen:C3554224,OMIM:614962,Orphanet:ORPHA66628 Leptin deficiency or dysfunction germline 7 128254572 ATCCAAATATCCAACGACCTGGAGAACCTCCGGGATCTTCTTCACGTGCTGGCCTTCTCTA 1085307500 414831 NM_021007.2(SCN2A):c.3703C>T (p.Arg1235Ter) SCN2A Apr 26, 2017 MedGen:CN517202 not provided germline 2 165370153 CAGGCCTTTGAAGATATATACATTGAGCAGCGAAAAACCATTAAGACCATGTTAGAATATG 1057518907 361065 NM_001077488.3(GNAS):c.85C>T (p.Gln29Ter) GNAS May 29, 2014 Human Phenotype Ontology:HP:0001156,MedGen:CN001088;Human Phenotype Ontology:HP:0100543,MedGen:C0683322;Human Phenotype Ontology:HP:0002901,MedGen:C0020598;Human Phenotype Ontology:HP:0001513,MedGen:C1963185;Human Phenotype Ontology:HP:0000311,MedGen:C1856468;Human Phenotype Ontology:HP:0004322,MedGen:C0349588;Human Phenotype Ontology:HP:0001482,MedGen:C0151811;Human Phenotype Ontology:HP:0001281,MedGen:C0039621 Brachydactyly syndrome;Cognitive impairment;Hypocalcemia;Obesity;Round face;Short stature;Subcutaneous nodule;Tetany unknown 20 58891811 CAGCGTGAGGCCAACAAAAAGATCGAGAAGCAGCTGCAGAAGGACAAGCAGGTCTACCGGG 144023803 359454 NM_000094.3(COL7A1):c.1732C>T (p.Arg578Ter) COL7A1 Aug 30, 2017 MedGen:C0079474,OMIM:226600,SNOMED CT:48528004;MedGen:CN517202 Recessive dystrophic epidermolysis bullosa;not provided germline;maternal 3 48590721 GGGCTTAGCTACACTGTGCGGGTGTCTGCTCGAGTGGGTCCCCGTGAGGGCAGTGCCAGTG 387906619 38628 NM_000791.3(DHFR):c.238C>T (p.Leu80Phe) DHFR Feb 11, 2011 MedGen:C3151205,OMIM:613839,Orphanet:ORPHA319651 Megaloblastic anemia due to dihydrofolate reductase deficiency germline 5 80649393 GGTAGAATTAATTTAGTTCTCAGCAGAGAACTCAAGTAAGTACCTTAACATAAATTCACCA 387906938 39533 NM_014762.3(DHCR24):c.307C>T (p.Arg103Cys) DHCR24 Sep 01, 2011 MedGen:C1865596,OMIM:602398,Orphanet:ORPHA35107 Desmosterolosis germline 1 54883698 GGGCGCCCTGGCTGGCTCACTGTCTCACTACGTGTCGGGAAGTACAAGAAGACACACAAAA 121913327 15840 NM_000038.5(APC):c.4012C>T (p.Gln1338Ter) APC Mar 22, 2016 MedGen:C0699790,OMIM:114500,SNOMED CT:269533000;MeSH:D015179,MedGen:CN236642;MedGen:C2713442,OMIM:175100 Carcinoma of colon;Colorectal Neoplasms;Familial adenomatous polyposis 1 germline;somatic;unknown 5 112839606 CAGCACCCTAGAACCAAATCCAGCAGACTGCAGGGTTCTAGTTTATCTTCAGAATCAGCCA 80357260 69792 NM_007294.3(BRCA1):c.4183C>T (p.Gln1395Ter) BRCA1 Jul 24, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline;unknown 17 43090946 CTATCCTCTCAGAGTGACATTTTAACCACTCAGGTAAAAAGCGTGTGTGTGTGTGCACATG 121912603 17387 NM_016341.3(PLCE1):c.4846C>T (p.Gln1616Ter) PLCE1 Dec 01, 2006 MedGen:C1853124,OMIM:610725 Nephrotic syndrome, type 3 germline 10 94283840 CCTGAAAATAAATCATGTAATGACAAGCTTCAGTTTGAATATAATGAAGAAATCCCAAAGA -1 439900 NM_000441.1(SLC26A4):c.226C>T (p.Pro76Ser) SLC26A4 Jul 01, 2017 Human Phenotype Ontology:HP:0011387,MedGen:C1863752,OMIM:600791 Enlarged vestibular aqueduct germline 7 107663357 AAGACTCTTGTGCCCATCTTGGAGTGGCTCCCCAAATACCGAGTCAAGGAATGGCTGCTTA 80358429 65789 NM_000059.3(BRCA2):c.1414C>T (p.Gln472Ter) BRCA2 Sep 08, 2016 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome germline 13 32332892 GAAACAGTGGTAAATAAGAGAGATGAAGAGCAGCATCTTGAATCTCATACAGACTGCATTC 587777089 102940 NM_014754.2(PTDSS1):c.805C>T (p.Pro269Ser) PTDSS1 Jan 01, 2014 MedGen:C0432269,OMIM:151050,Orphanet:ORPHA2658,SNOMED CT:1393001 Lenz-Majewski hyperostosis syndrome germline 8 96304092 AAGATCAAGAGAGCTGTTCTGCAGTTCACTCCTGCTAGCTGGACCTATGTTCGATGGTTTG 869320709 227146 NM_000409.4(GUCA1A):c.250C>T (p.Leu84Phe) GUCA1A Apr 12, 2016 MedGen:C1865869,OMIM:602093 Cone dystrophy 3 germline 6 42178328 ATGGAGTACGTGGCAGCGCTCAGCTTGGTCCTCAAGGGGAAGGTGGAACAGAAGCTCCGCT 368790049 76721 NM_194248.2(OTOF):c.5815C>T (p.Arg1939Trp) OTOF Apr 26, 2011 MedGen:C1832828,OMIM:601071 Deafness, autosomal recessive 9 not provided 2 26460204 CTCTGCGCTCTCTACCCTTCATACTCCAGCCGGCCCGACACGAGCTTCATCTGGTTCCTGA 587776931 48264 NM_020699.3(GATAD2B):c.1408C>T (p.Gln470Ter) GATAD2B Nov 15, 2012 MedGen:C3554448,OMIM:615074,Orphanet:ORPHA363686 Mental retardation, autosomal dominant 18 germline 1 153813261 CGGCTGAAAAATGCATTTGTGAAAGCCCTACAGCAGGAACAGGTAAGAATTCTGACTGCTC 121912876 32407 NM_001844.4(COL2A1):c.823C>T (p.Arg275Cys) COL2A1 Oct 01, 2009 MedGen:C1836683,OMIM:609162,Orphanet:ORPHA137678 Czech dysplasia metatarsal type germline 12 47994041 GAACACCTCCACTTTGGATTGCAGGGTGCTCGTGGTTTCCCAGGAACCCCAGGCCTTCCTG 121908464 20870 NM_005682.6(ADGRG1):c.1693C>T (p.Arg565Trp) ADGRG1 Sep 27, 2016 MedGen:C1847352,OMIM:606854,Orphanet:ORPHA101070;MedGen:CN517202 Polymicrogyria, bilateral frontoparietal;not provided germline 16 57661707 CCTCCTGCCTTTGCCCGCAGGTGCTGGATCCGGGACTCCCTGGTCAGCTACATCACCAACC 1060505021 404633 NM_000368.4(TSC1):c.610C>T (p.Arg204Cys) TSC1 Apr 11, 2017 MedGen:C1846385,OMIM:607341,Orphanet:ORPHA268994 Focal cortical dysplasia type II somatic 9 132921872 ATGTACCCTTGCAACTTCGTCTCCTTTTTGCGTTCTCATTACAGTATGAAAGAAAACCTGG 753101269 268035 NM_001277115.1(DNAH11):c.9706C>T (p.Arg3236Ter) DNAH11 Oct 08, 2015 MedGen:C2678473,OMIM:611884 Ciliary dyskinesia, primary, 7 germline 7 21786732 CTGGCTCCTCGGGGAAGAGTGCCCAAAGACCGAAGTTGGAAAGCAGCTAAAGTCTTCATGG 118203542 57958 NM_000368.4(TSC1):c.1525C>T (p.Arg509Ter) TSC1 May 18, 2017 MedGen:C1846385,OMIM:607341,Orphanet:ORPHA268994;MedGen:C0751674,OMIM:606690,Orphanet:ORPHA538,SNOMED CT:73017001;MedGen:C0005684,OMIM:109800,Orphanet:ORPHA157980,SNOMED CT:399326009;MedGen:C1854465,OMIM:191100;MedGen:C1854465,OMIM:191100;MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000;MedGen:CN517202 Focal cortical dysplasia type II;Lymphangiomyomatosis;Malignant tumor of urinary bladder;Tuberous sclerosis 1;Tuberous sclerosis 1;Tuberous sclerosis syndrome;not provided germline;unknown 9 132906053 CCTCGAGGAGGCTTTGACTCTCCCTTTTACCGAGACAGTCTCCCAGGTTCTCAGCGGAAGA 727503762 150326 NM_031229.3(RBCK1):c.553C>T (p.Gln185Ter) RBCK1 Dec 01, 2012 MedGen:C4014605,OMIM:615895,Orphanet:ORPHA397937 Polyglucosan body myopathy 1 with or without immunodeficiency germline 20 419439 CCCGGGGTCCCCCAGGAACCCGGACGGGGGCAGCCAGATGCAGTGCCTGAGCCCCCACCGG 886039523 259900 NM_017780.3(CHD7):c.151C>T (p.Gln51Ter) CHD7 Jun 15, 2016 MedGen:CN517202 not provided germline 8 60741583 ATGCCAATAGACCAAGGCTTTGCCTCTTTACAGCCATCCCTTCATCATCCTTCAACTAATC 387906862 39319 NM_002420.5(TRPM1):c.1870C>T (p.Arg624Cys) TRPM1 Mar 18, 2016 MedGen:C2750747,OMIM:613216 Congenital stationary night blindness, type 1C germline 15 31042102 GAGCTGATGGTGTGGGCAGTGCTGATGAAACGCCAGAAAATGGCAGTGTTCCTCTGGCAGC 749633059 264774 NM_004782.3(SNAP29):c.85C>T (p.Arg29Ter) SNAP29 Sep 01, 2016 MedGen:CN517202 not provided germline 22 20859195 GGCGCCCGGCCGGCCCCTTGGAGGGACGCCCGAGACCTCCCCGACGGGCCCGACGCGCCCG 766090540 263991 NM_015284.3(SZT2):c.4225C>T (p.Arg1409Ter) SZT2 Mar 04, 2016 MedGen:CN517202 not provided germline 1 43430098 TACTTCTTCTATTGCCCTCCATCCAGCAGGCGAGAAGTGAGTGGCTCTCTTCCTTACCTCT 121912821 32551 NM_020549.4(CHAT):c.1493C>T (p.Ser498Leu) CHAT Feb 13, 2001 MedGen:C0393929,OMIM:254210,SNOMED CT:230670003 Familial infantile myasthenia germline 10 49649618 CCCCGGAAATTCAAGGCCACTTAGCCTCCTCGGCAGAAAAACTTCAACGGTAAGGATAACC 201196733 268974 NM_031885.3(BBS2):c.1864C>T (p.Arg622Ter) BBS2 Jun 27, 2017 MedGen:C0752166,OMIM:209900,Orphanet:ORPHA110,SNOMED CT:5619004;MedGen:C2936863,OMIM:615981;MedGen:CN517202 Bardet-Biedl syndrome;Bardet-Biedl syndrome 2;not provided germline;unknown 16 56497013 GCTGATATGGCTGATCATTCTAATTTGATCCGAAGTTTGCTGGTCGGAGCTGAGGATGCTC 28941785 17978 NM_001902.5(CTH):c.200C>T (p.Thr67Ile) CTH Jun 14, 2016 MedGen:C0220993,OMIM:219500,Orphanet:ORPHA212,SNOMED CT:13003007 Cystathioninuria germline 1 70415987 GTTTTGAATATAGCCGTTCTGGAAATCCCACTAGGAATTGCCTTGAAAAAGCAGTGGCAGC 201714423 441051 NM_000083.2(CLCN1):c.1129C>T (p.Arg377Ter) CLCN1 Oct 31, 2016 MedGen:CN517202 not provided germline 7 143331615 TATCTGCATCGCCAAGTCATGCTCGGTGTCCGAAAGCACAAGGCCCTCAGCCAGTTTCTTG 397514874 75759 NM_000368.4(TSC1):c.2128C>T (p.Gln710Ter) TSC1 Aug 31, 2017 MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000;MedGen:CN517202 Tuberous sclerosis syndrome;not provided germline 9 132903731 AACCAGTTACTCTATGAGCGTTTTAAGAGGCAGCAGCATGCCCTCCGGAACAGGCGGCTCC 201967266 246148 NM_000527.4(LDLR):c.1420C>T (p.Gln474Ter) LDLR Mar 25, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11113596 TCCTATGACACCGTCATCAGCAGAGACATCCAGGCCCCCGACGGGCTGGCTGTGGACTGGA 104894787 26252 NM_004006.2(DMD):c.10108C>T (p.Arg3370Ter) DMD Oct 25, 2016 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009;MedGen:C3668940,OMIM:302045;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Becker muscular dystrophy;Dilated cardiomyopathy 3B;Duchenne muscular dystrophy germline X 31178784 CCCTTTTAGACTACATCAGGAGAAGATGTTCGAGACTTTGCCAAGGTACTAAAAAACAAAT 137852915 18139 NM_005670.3(EPM2A):c.322C>T (p.Arg108Cys) EPM2A Oct 01, 2005 MedGen:C0751783,OMIM:254780,Orphanet:ORPHA501,SNOMED CT:230425004 Lafora disease germline 6 145686276 CTTGTTCTAGGCAATGGACCTCATCATGACCGTTGCTGTACTTACAATGAAAACAACTTGG 886039494 260118 NM_020988.2(GNAO1):c.625C>T (p.Arg209Cys) GNAO1 Sep 28, 2017 MedGen:C0393706,Orphanet:ORPHA1934;MedGen:CN244050,OMIM:617493;MedGen:CN517202 Early infantile epileptic encephalopathy;Neurodevelopmental disorder with involuntary movements;not provided germline 16 56336762 CTGTTTGACGTCGGAGGCCAGCGATCTGAACGCAAGAAGTGGATCCATTGCTTCGAGGACG 727503844 177178 NM_004006.2(DMD):c.2956C>T (p.Gln986Ter) DMD Nov 10, 2015 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009;MedGen:C3668940,OMIM:302045;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001;MedGen:CN517202 Becker muscular dystrophy;Dilated cardiomyopathy 3B;Duchenne muscular dystrophy;not provided germline X 32468704 TGTATTTAAAAAATTGTTTTTTAGGCTTTACAAAGTTCTCTGCAAGAGCAACAAAGTGGCC 587783541 169907 NM_178151.2(DCX):c.304C>T (p.Arg102Cys) DCX Feb 08, 2013 Human Phenotype Ontology:HP:0002282,MedGen:C0008519 Heterotopia germline X 111410095 TCTGACAACATCAACCTGCCTCAGGGAGTGCGTTACATTTACACCATTGATGGATCCAGGA 1057517944 360048 NM_000020.2(ACVRL1):c.1435C>T (p.Arg479Ter) ACVRL1 Mar 26, 2017 MedGen:C1838163,OMIM:600376;MedGen:C0039445,OMIM:187300,Orphanet:ORPHA774,SNOMED CT:21877004;MedGen:C1832529;MedGen:CN517202;MedGen:CN169374 Hereditary hemorrhagic telangiectasia type 2;Osler hemorrhagic telangiectasia syndrome;Pulmonary arterial hypertension related to hereditary hemorrhagic telangiectasia;not provided;not specified germline;somatic 12 51920816 CGGGAGTGCTGGTACCCAAACCCCTCTGCCCGACTCACCGCGCTGCGGATCAAGAAGACAC 397518485 94347 NM_147686.3(TRAF3IP2):c.1580C>T (p.Thr527Ile) TRAF3IP2 Oct 17, 2013 MedGen:C3714992,OMIM:615527 Candidiasis, familial, 8 germline 6 111559523 AGGAGCATGTGCCCACCTGGCTTCAGAACACTCATGTCTACAGCTGGCCCAAGAATAAAAA 137852673 24144 NM_000352.4(ABCC8):c.4135C>T (p.Arg1379Cys) ABCC8 Mar 01, 2016 Human Phenotype Ontology:HP:0005978,MedGen:C0011860,OMIM:125853,Orphanet:ORPHA181376,SNOMED CT:44054006;MedGen:C1833104,OMIM:606176,Orphanet:ORPHA99885;MedGen:C1835887,OMIM:610374 Diabetes mellitus type 2;Permanent neonatal diabetes mellitus;Transient neonatal diabetes mellitus 2 germline 11 17395915 CTTCTCTCTTTCCAGATCGGGATCTGCGGCCGCACCGGCAGTGGGAAGTCCTCCTTCTCTC 587783795 170063 NM_000252.2(MTM1):c.1456C>T (p.Arg486Ter) MTM1 Feb 08, 2013 MedGen:C0410203,OMIM:310400,Orphanet:ORPHA596,SNOMED CT:46804001 Severe X-linked myotubular myopathy germline X 150660473 GGTACTTTCTTATTCAACTGTGAATCTGCTCGAGAAAGACAGGTGAGTTAAAATGCTATTT 267607077 22967 NM_014014.4(SNRNP200):c.3260C>T (p.Ser1087Leu) SNRNP200 Jan 01, 2015 Human Phenotype Ontology:HP:0000547,MeSH:D012174,MedGen:C0035334,OMIM:268000,Orphanet:ORPHA791,SNOMED CT:28835009;MedGen:C1835895,OMIM:610359 Retinitis pigmentosa;Retinitis pigmentosa 33 germline;unknown 2 96287968 AACAGTGGGAATGCTGCTTCTTTGCTTAGTCGGCTGGCCGGTTGATGCGAGCGATATTTGA 118203917 15680 NM_001136194.1(FASTKD2):c.1294C>T (p.Arg432Ter) FASTKD2 Sep 01, 2008 MedGen:C0268237,OMIM:220110,Orphanet:ORPHA254905,SNOMED CT:67434000 Hepatic failure, early-onset, and neurologic disorder due to cytochrome C oxidase deficiency germline 2 206774264 ATCCTCATTTTATTTGAAAACCTTGGCTTTCGACCTGTTGGTTTAATGGACCTGTTTATGA 767570081 359724 NM_032119.3(ADGRV1):c.11410C>T (p.Arg3804Ter) ADGRV1 Jun 02, 2015 MedGen:CN517202 not provided germline 5 90755015 AACACCACCACTCTTCAGTTACAAATAGCTCGAGATAAAGGACTACTTGGGGATATTGCCA 121907909 18533 NM_024426.4(WT1):c.1372C>T (p.Arg458Ter) WT1 Jul 03, 2017 MedGen:C0950121,OMIM:194080,Orphanet:ORPHA220,SNOMED CT:236385009;MedGen:C0950122,OMIM:136680,Orphanet:ORPHA347,SNOMED CT:445431000;MedGen:C0950122,OMIM:136680,Orphanet:ORPHA347,SNOMED CT:445431000;MedGen:CN033288,OMIM:194070;MedGen:CN033288,OMIM:194070;Gene:100528024,MedGen:C0206115,OMIM:194072,Orphanet:ORPHA893,SNOMED CT:4135001;MedGen:CN517202 Drash syndrome;Frasier syndrome;Frasier syndrome;Wilms tumor 1;Wilms tumor 1;Wilms tumor, aniridia, genitourinary anomalies, and mental retardation syndrome;not provided germline;unknown 11 32392032 GTGAAACCATTCCAGTGTAAAACTTGTCAGCGAAAGTTCTCCCGGTCCGACCACCTGAAGA 11555096 26907 NM_000137.2(FAH):c.1021C>T (p.Arg341Trp) FAH Sep 14, 2016 MedGen:C4017342;MedGen:C0268490,OMIM:276700,Orphanet:ORPHA882,SNOMED CT:124536006,SNOMED CT:410056006;MedGen:CN517202 Fumarylacetoacetase pseudodeficiency;Tyrosinemia type I;not provided germline 15 80180184 ACTCACCACTCTGTCAACGGCTGCAACCTGCGGCCGGGGGACCTCCTGGCTTCTGGGACCA 118192147 76860 NM_000540.2(RYR1):c.14659C>T (p.His4887Tyr) RYR1 May 11, 2010 MedGen:C0751951,OMIM:117000,Orphanet:ORPHA597,SNOMED CT:43152001;MedGen:CN517202 Central core disease;not provided unknown 19 38584955 TGTGCTCCCCTCCCTCAGTGTTACCTGTTTCACATGTACGTGGGTGTCCGGGCTGGCGGAG 773359554 59544 NM_001256240.1(PGAP2):c.46C>T (p.Arg16Trp) PGAP2 Apr 04, 2013 Gene:100689013,MedGen:C3280153,OMIM:614207 Hyperphosphatasia with mental retardation syndrome 3 germline 11 3811305 CTACCACTGGATCGGGATGGGACCCTGGTACGGCTCCGCTTCACCATGGTGGCCCTGGTCA 146538906 39622 NM_147127.4(EVC2):c.2653C>T (p.Arg885Ter) EVC2 Sep 01, 2011 MedGen:C0013903,OMIM:225500,Orphanet:ORPHA289,SNOMED CT:62501005 Chondroectodermal dysplasia germline 4 5618531 GTTCTGCTGCAGCAATTTCAGACTGCGTGGCGAGAAGCAGAGTTCGTGAAGCTGGACCAGG 886044332 274259 NM_025114.3(CEP290):c.2668C>T (p.Gln890Ter) CEP290 Aug 08, 2016 MedGen:C1857780,OMIM:610188 Joubert syndrome 5 germline 12 88106824 GCAGAAAATAGTAGGAAAATTACTGTTTTGCAAGTGAATGAAAAATCACTTATAAGGCAAT 397514511 48078 NM_001567.3(INPPL1):c.1201C>T (p.Arg401Trp) INPPL1 Feb 04, 2013 MedGen:C0432219,OMIM:258480,Orphanet:ORPHA2746,SNOMED CT:254068007 Opsismodysplasia germline 11 72230799 GCCCCTGAGTGGCTGCTGTTCCCCCAGAAGCGGGAGGCCTTCTGCCAGCTGTTGCAGCTCA 140813121 44257 NM_000066.3(C8B):c.820C>T (p.Arg274Ter) C8B Sep 01, 2009 MedGen:C3151080,OMIM:613789 Complement component 8 deficiency type 2 germline 1 56949599 TTTGAACTTGGCATCAGTAGTCAAAGTGATCGAGGCAAACACTATATTAGGAGAACCAAAC 61750643 105319 NM_000350.2(ABCA4):c.6112C>T (p.Arg2038Trp) ABCA4 Jan 01, 2016 MeSH:C535804,MedGen:C1855465,OMIM:248200;MedGen:CN517202 Stargardt disease 1;not provided germline 1 94005476 ACAGGACGAGAACATCTTTACCTTTATGCCCGGCTTCGAGGTGTACCAGCAGAAGAAATCG 119455952 17691 NM_152281.2(GORAB):c.859C>T (p.Arg287Ter) GORAB Dec 01, 2008 MedGen:C0432255,OMIM:231070,Orphanet:ORPHA2078,SNOMED CT:254116003 Geroderma osteodysplastica germline 1 170552136 CTTTGTACGATCATACAGCAAAATGAGCTCCGAAAGGCCAAGAAGTTGGAGGAGTTGATGC 185919705 94338 NM_152336.3(AGBL1):c.3220C>T (p.Arg1074Ter) AGBL1 Oct 03, 2013 MedGen:C3809798,OMIM:615523 Corneal dystrophy, Fuchs endothelial, 8 germline 15 86674435 GAGGAGGACGCTCTGGACCAGCACCTCCAACGGTAAGATGCTCCCAAGGGCTCAGAGAAAT 74598136 19363 NM_001005741.2(GBA):c.1319C>T (p.Pro440Leu) GBA Jun 04, 1999 MedGen:C1961835,OMIM:230800,SNOMED CT:62201009 Gaucher's disease, type 1 germline 1 155235750 CCAATTGGGTGCGTAACTTTGTCGACAGTCCCATCATTGTAGACATCACCAAGGACACGTT 267607517 77344 NM_002055.4(GFAP):c.1148C>T (p.Thr383Ile) GFAP Jan 08, 2015 MedGen:C0270726,OMIM:203450,Orphanet:ORPHA58,SNOMED CT:81854007;MedGen:CN517202 Alexander's disease;not provided germline 17 44910638 TTTCTTTCAGGATCACCATTCCCGTGCAGACCTTCTCCAACCTGCAGATTCGAGGTCAGTA 182923857 99242 NM_000709.3(BCKDHA):c.1036C>T (p.Arg346Cys) BCKDHA Aug 25, 2013 MedGen:C0024776,OMIM:248600,SNOMED CT:27718001 Maple syrup urine disease germline 19 41423038 CACAGCACCAGTGACGACAGTTCAGCGTACCGCTCGGTGGATGAGGTCAATTACTGGGATA 120074127 18032 NM_000543.4(SMPD1):c.1327C>T (p.Arg443Ter) SMPD1 May 24, 2016 MedGen:C0268242,OMIM:257200,Orphanet:ORPHA77292,SNOMED CT:52165006;MedGen:C0268243,OMIM:607616,Orphanet:ORPHA77293,SNOMED CT:39390005;MedGen:CN517202 Niemann-Pick disease, type A;Niemann-Pick disease, type B;not provided germline;unknown 11 6393680 TGTCTGAAGAGCTGGAGCTGGAATTATTACCGAATTGTAGCCAGGTAGGACGGAGATGAGG 587777501 143227 NM_021147.4(CCNO):c.961C>T (p.Gln321Ter) CCNO Sep 03, 2015 MedGen:C4014534,OMIM:615872;MedGen:C0022521,OMIM:244400,Orphanet:ORPHA98861,SNOMED CT:42402006 Ciliary dyskinesia, primary, 29;Kartagener syndrome germline 5 55231467 GCGGCGCTGGAGGACTGTATGGGCAAGTTGCAGCTGCTGGTGGCCATAAACAGTACTTCCT 796052118 200887 NM_031924.5(RSPH3):c.1192C>T (p.Arg398Ter) RSPH3 Jul 02, 2015 MedGen:C4225311,OMIM:616481 Ciliary dyskinesia, primary, 32 germline 6 158980867 CACAACGAGACATCACAAAAAATCGCCGCCCGAGCATTTGCACAGCGTTACCTGGCTGACC 121434337 17098 NM_152443.2(RDH12):c.464C>T (p.Thr155Ile) RDH12 Dec 15, 2005 MedGen:C2675186,OMIM:612712 Leber congenital amaurosis 13 germline 14 67726996 TGGCTCTCCTCACAGGCCACTTCCTCCTCACCTACCTGCTCCTGGAGCGGCTAAAGGTGTC 757782702 421065 NM_000051.3(ATM):c.850C>T (p.Gln284Ter) ATM Nov 05, 2015 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 11 108244975 TCTTTAAAAGAAGTCATTATTGAATTATTTCAACTGCAAATTTATATCCATCATCCGAAAG 200177031 485963 NM_001145079.1(COG6):c.511C>T (p.Arg171Ter) COG6 Feb 22, 2018 MedGen:C3553230,OMIM:614576,Orphanet:ORPHA464443 Congenital disorder of glycosylation type 2L germline 13 39677550 CAACTGACTTCTGATGAAATGAGTCTTCTCCGAGGTACAAGAGAAGGACCCATTACTGAGG 727504410 176124 NM_000138.4(FBN1):c.6886C>T (p.Gln2296Ter) FBN1 Jan 29, 2016 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006 Marfan syndrome germline 15 48428457 CAATAAAATCAAACAGATGAGAATGAATGTCAGACGAAGCCAGGGATCTGTGAGAATGGGC 1057520569 364847 NM_006147.3(IRF6):c.352C>T (p.Gln118Ter) IRF6 Mar 19, 2015 MedGen:CN517202 not provided germline 1 209796375 GTGAAGATATATCAAGTGTGTGACATCCCTCAGCCCCAGGGCTCGATCATTAACCCAGGTG 387907365 59493 NM_002290.4(LAMA4):c.2828C>T (p.Pro943Leu) LAMA4 Jul 31, 2007 MedGen:C3808935,OMIM:615235 Dilated cardiomyopathy 1JJ germline 6 112140887 GAAAACATGGAAAGGTGTTTTTAACAGTCCCGAGTCTAAGTAGCACAGCAGAGGAAAAGTT 121909017 22194 NM_000492.3(CFTR):c.1475C>T (p.Ser492Phe) CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline;unknown 7 117559546 TTAAGCACAGTGGAAGAATTTCATTCTGTTCTCAGTTTTCCTGGATTATGCCTGGCACCAT 34599082 33435 NM_002036.3(ACKR1):c.265C>T (p.Arg89Cys) ACKR1 Jun 01, 2001 na DUFFY BLOOD GROUP SYSTEM, FY(bwk) PHENOTYPE germline 1 159205704 GTCCTCTTCATGCTTTTCAGACCTCTCTTCCGCTGGCAGCTCTGCCCTGGCTGGCCTGTCC 387906887 39375 NM_006059.3(LAMC3):c.1156C>T (p.Gln386Ter) LAMC3 Jun 01, 2011 MedGen:C3279875,OMIM:614115,Orphanet:ORPHA280640 Cortical malformations, occipital germline 9 131039043 CCGCGGATGCCATGCCAGCCCTGTGACTGCCAGTCGGCAGGTGAGTGGACTCCACATCCCC 397515848 51592 NM_000138.4(FBN1):c.7180C>T (p.Arg2394Ter) FBN1 Jul 05, 2011 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006 Marfan syndrome germline 15 48427591 GTGGCTTTCAAGAAACTCTGTCCCCATGGCCGAGGATTCATGACCAATGGAGCAGGTACTT 199476101 23246 NM_001009944.2(PKD1):c.5764C>T (p.Gln1922Ter) PKD1 Jul 01, 1999 MedGen:C0085413,OMIM:173900,SNOMED CT:28728008 Polycystic kidney disease, adult type germline 16 2109403 GCTGCCGGCTCAGCTGTCACCTTCCGCCTGCAGGTCGGCGGGGCCAACCCCGAGGTGCTCC 878854594 241050 NM_003002.3(SDHD):c.361C>T (p.Gln121Ter) SDHD Jun 30, 2017 MedGen:C1868633,OMIM:168000 Paragangliomas 1 germline 11 112094851 GTTACTGACTATGTTCATGGGGATGCCTTGCAGAAAGCTGCCAAGGCAGGGCTTTTGGCAC 964711006 440181 NM_001080463.1(DYNC2H1):c.7984C>T (p.Arg2662Trp) DYNC2H1 Jun 01, 2017 MedGen:CN674506;MedGen:CN674505 Short-rib polydactyly syndrome type I;Short-rib polydactyly syndrome type III unknown 11 103199372 CTATTAGCAGGACGCAGTGGTGTAGGTCGTCGGACCATCACTTCTTTAGTCAGTCACATGC 199472844 78120 NM_000238.3(KCNH2):c.164C>T (p.Ser55Leu) KCNH2 Sep 15, 2011 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MedGen:CN517202 Congenital long QT syndrome;not provided germline 7 150974854 ACGACGGCTTCTGCGAGCTGTGCGGCTACTCGCGGGCCGAGGTGATGCAGCGACCCTGCAC 137852471 25369 NM_000132.3(F8):c.6865C>T (p.Gln2289Ter) F8 Jan 01, 1995 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154860467 TTCCTCATCTCCAGCAGTCAAGATGGCCATCAGTGGACTCTCTTTTTTCAGAATGGCAAAG 1060501082 400216 NM_000138.4(FBN1):c.2089C>T (p.Gln697Ter) FBN1 May 15, 2016 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006 Marfan syndrome germline 15 48503811 AGCACTGAGTATGCATTTGGGGAACCTTGCCAGCCGTGTCCTGCACAGAATTCAGGTATGT -1 442707 NM_172362.2(KCNH1):c.1465C>T (p.Leu489Phe) KCNH1 Aug 22, 2017 MedGen:CN517202 not provided germline 1 210804164 TTCTTTTGCTCCTCCTCCTCACCTCTAGCACTTCTCTATGCCACCATCTTCGGGAATGTGA 875989879 227917 NM_017780.3(CHD7):c.6292C>T (p.Arg2098Ter) CHD7 Mar 29, 2016 MedGen:C0265354,OMIM:214800,Orphanet:ORPHA138,SNOMED CT:47535005 CHARGE association de novo 8 60853017 CCAGAGTGGTGGGAGTGTGGACGGCATGACCGAGACTTGCTGGTTGGTGCTGCTAAACACG 886044837 269319 NM_000202.7(IDS):c.1591C>T (p.Gln531Ter) IDS Nov 23, 2015 MedGen:C0026705,OMIM:309900,SNOMED CT:70737009 Mucopolysaccharidosis, MPS-II germline X 149482808 GAACTGTATTTTGTGGATTCTGACCCATTGCAGGATCACAATATGTATAATGATTCCCAAG 797045947 206782 NM_006642.4(SDCCAG8):c.481C>T (p.Gln161Ter) SDCCAG8 Apr 09, 2015 MedGen:C3150877,OMIM:613615 Senior-Loken syndrome 7 germline 1 243286332 CAAGTAGTTGTGCTTGAAAACGAAGGGCTCCAGCAACAGCTAAAATCTCAAAGACAAGAGG 60035576 38719 NM_000421.3(KRT10):c.1300C>T (p.Gln434Ter) KRT10 Apr 01, 2006 Human Phenotype Ontology:HP:0007475,MedGen:C0079153,OMIM:113800,Orphanet:ORPHA312,SNOMED CT:254167000;MedGen:CN517202 Bullous ichthyosiform erythroderma;not provided germline 17 40819590 GAAACCGAGTGCCAGAATACTGAATACCAACAACTCCTGGATATTAAGATCCGACTGGAGA 387907191 40338 NM_017755.5(NSUN2):c.1114C>T (p.Gln372Ter) NSUN2 May 04, 2012 MedGen:C1970199,OMIM:611091 Mental retardation, autosomal recessive 5 germline 5 6611067 GTGGTTCTGCAGGTAATGACGAAAGATGGGCAGTGGTTTACAGACTGGGACGCTGTTCCTC 72555372 15980 NM_000404.3(GLB1):c.1051C>T (p.Arg351Ter) GLB1 Jul 01, 2000 MedGen:C1968747 GM1-gangliosidosis, type I, with cardiac involvement germline 3 33046137 GGGGACCTCACTGAGAAGTATTTTGCTCTGCGAAACATCATCCAGAAGGTGGGTGCTTTGT 863223792 209442 NM_003238.3(TGFB2):c.895C>T (p.Arg299Trp) TGFB2 Feb 06, 2017 MedGen:C3553762,OMIM:614816;MedGen:CN517202 Loeys-Dietz syndrome 4;not provided germline 1 218436110 TACAGACTTGAGTCACAACAGACCAACCGGCGGAAGAAGCGTGCTTTGGATGCGGCCTATT 137852841 17720 NM_031443.3(CCM2):c.319C>T (p.Gln107Ter) CCM2 Nov 30, 2016 MedGen:C1864041,OMIM:603284;MedGen:CN517202 Cerebral cavernous malformations 2;not provided germline 7 45064493 AGAGCCCACCAGCTTCCGGGACACTTGACTCAGGAGCACGATGCTGTGCTCAGCCTGTCTG 758026399 231821 NM_000431.3(MVK):c.643C>T (p.Arg215Ter) MVK Nov 16, 2015 MedGen:CN517202 not provided germline 12 109586765 CACTGGTTTTTCTCTTTAGGAGGAGCCCTCCGATACCATCAAGGGAAGATTTCATCCTTAA 1057519455 362145 NM_203290.3(POLR1C):c.88C>T (p.Pro30Ser) POLR1C - MedGen:C4225305,OMIM:616494 Leukodystrophy, hypomyelinating, 11 germline 6 43517324 CCTTTGCTCTAGGTCCATACTACTGACTTTCCCGGTAACTATTCCGGTTATGATGATGCCT 886042421 266790 NM_033071.3(SYNE1):c.21721C>T (p.Gln7241Ter) SYNE1 Aug 14, 2015 MedGen:C2751807,OMIM:612998;MedGen:C1853116,OMIM:610743,Orphanet:ORPHA88644 Emery-Dreifuss muscular dystrophy 4, autosomal dominant;Spinocerebellar ataxia, autosomal recessive 8 germline 6 152219113 TTTCTCCATGAGCTGGGAGAGCAACTGAAGCAACAAGTGGATGCTTCCGCAGCATCAGCTA 80356517 34132 NM_001457.3(FLNB):c.1945C>T (p.Arg649Ter) FLNB Apr 01, 2015 MedGen:C1848934,OMIM:272460,Orphanet:ORPHA3275 Spondylocarpotarsal synostosis syndrome inherited 3 58108461 GAGACTTACTATCTGCCTTTGCTTCAGGTTCGAGCATACGGGCCAGGTTTGGAGAAATCTG 137852649 24239 NM_001609.3(ACADSB):c.763C>T (p.Leu255Phe) ACADSB Feb 01, 2006 MedGen:C1864912,OMIM:610006,Orphanet:ORPHA79157,SNOMED CT:444838008 Deficiency of 2-methylbutyryl-CoA dehydrogenase germline 10 123043127 CATATAGGGAAACCTGAAAACAAATTGGGGCTCAGAGCTTCTTCCACCTGCCCGTTAACAT 1060503288 427299 NM_000038.5(APC):c.4405C>T (p.Gln1469Ter) APC - MedGen:CN240755 Familial adenomatous polyposis germline 5 112839999 ACTGCTGAAAAGAGAGAGAGTGGACCTAAGCAAGCTGCAGTAAATGCTGCAGTTCAGAGGG 373764886 181524 NM_017831.3(RNF125):c.488C>T (p.Ser163Leu) RNF125 Mar 11, 2015 MedGen:C4015710,OMIM:616260 Tenorio syndrome germline 18 32045716 TGCTGGATCATTGTATTACTCATCACAGATCGGAACGGAGGCCTGTGGTAAGGATTTTTGT 766028970 443706 NM_006846.3(SPINK5):c.2215C>T (p.Gln739Ter) SPINK5 Sep 11, 2017 MedGen:CN517202 not provided germline 5 148118539 CGTGATGCTGATGGCAAATCGTACAACAATCAGTGTACCATGTGTAAAGCAAAATTGTAAG 121913659 29095 NM_007103.3(NDUFV1):c.1268C>T (p.Thr423Met) NDUFV1 May 18, 2017 MedGen:C1838979,OMIM:252010;MedGen:CN517202 Mitochondrial complex I deficiency;not provided germline;maternal;unknown 11 67612225 GGGAGATCAGCAAGCAGATAGAAGGCCATACGATTTGTGCTCTGGGTGACGGGGCCGCCTG 137852978 19509 NM_177438.2(DICER1):c.2830C>T (p.Arg944Ter) DICER1 May 03, 2017 MedGen:CN072455,OMIM:601200;MedGen:C0027672,SNOMED CT:699346009;Human Phenotype Ontology:HP:0100528,MedGen:C1266144,Orphanet:ORPHA64742 DICER1-related pleuropulmonary blastoma cancer predisposition syndrome;Hereditary cancer-predisposing syndrome;Pleuropulmonary blastoma germline 14 95106198 TTTAGATATCGCAATTTTGATCAGCCTCATCGATTTTATGTAGCTGATGTGTACACTGATC -1 425340 NM_001100.3(ACTA1):c.821C>T (p.Ala274Val) ACTA1 Jun 22, 2017 MedGen:CN517202 not provided germline 1 229431890 CCCCGCCGCGGTCCCCAGGTATGGAGTCGGCGGGCATTCACGAGACCACCTACAACAGCAT 1114167307 247356 NM_021954.3(GJA3):c.56C>T (p.Thr19Met) GJA3 Jul 29, 2016 Human Phenotype Ontology:HP:0000519,MedGen:C1842324 Congenital cataract inherited 13 20143233 GACTCTTAGAAAATGCACAGGAGCACTCCACGGTCATCGGCAAGGTTTGGCTGACCGTGCT -1 434159 NM_000384.2(APOB):c.13135C>T (p.Gln4379Ter) APOB - MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 2 21002287 GAAGCTTCTCAAGAGTTACAGCAGATCCATCAATACATTATGGCCCTTCGTGAAGAATATT 387906802 39130 NM_000445.4(PLEC):c.6955C>T (p.Arg2319Ter) PLEC Jan 25, 2011 MedGen:C2931072,OMIM:226670,Orphanet:ORPHA257 Epidermolysa bullosa simplex and limb girdle muscular dystrophy germline 8 143923055 CGGCTGAGTGTGGCGGCCCAAGAGGCTGCGCGACTGCGGCAGCTGGCAGAGGAGGACCTGG 80356520 21436 NM_001457.3(FLNB):c.4819C>T (p.Arg1607Ter) FLNB Oct 09, 2008 MedGen:C1848934,OMIM:272460,Orphanet:ORPHA3275 Spondylocarpotarsal synostosis syndrome germline 3 58136126 GACGACATCCCACTTTCTCCTTATCGCATCCGAGCCACACAGACGGGTGATGCCAGCAAGT 267607128 27473 NM_000363.4(TNNI3):c.61C>T (p.Arg21Cys) TNNI3 Nov 01, 2005 MedGen:C1860752,OMIM:613690 Familial hypertrophic cardiomyopathy 7 germline 19 55157097 GAACCTCGCCCTGCACCAGCCCCAATCAGACGCCGCTCCTCCAACTACCGCGCTTATGCCA 939722027 440216 NM_014714.3(IFT140):c.70C>T (p.His24Tyr) IFT140 Jun 01, 2017 MedGen:C0265275,Orphanet:ORPHA474,SNOMED CT:75049004 Jeune thoracic dystrophy paternal 16 1607197 GCAGCAGGGTCACCCTCATTTATCAGCTGGCACCCTGTCCATCCATTCTTGGCAGTTGCTT 1060500357 402194 NM_000267.3(NF1):c.2848C>T (p.Gln950Ter) NF1 Aug 04, 2016 MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003 Neurofibromatosis, type 1 germline 17 31229463 ACCATCAGCAAGTTTTTTGACTCCCAAGGACAGGTAAAGTGTTCTCTTATTTTTCACCTTT 797044747 194799 NM_000169.2(GLA):c.661C>T (p.Gln221Ter) GLA Jul 11, 2014 Human Phenotype Ontology:HP:0001071,MedGen:C0002986,OMIM:301500,Orphanet:ORPHA324,SNOMED CT:16652001 Fabry disease germline X 101398925 TTTTCACAGCCCAATTATACAGAAATCCGACAGTACTGCAATCACTGGCGAAATTTTGCTG 1057519589 362423 NM_018713.2(SLC30A10):c.460C>T (p.Gln154Ter) SLC30A10 Feb 09, 2017 OMIM:613280 Hypermanganesemia with dystonia 1 germline 1 219927981 TGCCTCCGGGGACGCAGTCGCCGCCTGCAGCAGCGGCAGCAGCTGGCGGAGGGCTGTGTCC 397509247 70157 NM_007294.3(BRCA1):c.5266C>T (p.Gln1756Ter) BRCA1 Oct 18, 2016 MedGen:C2676676,OMIM:604370 Breast-ovarian cancer, familial 1 germline 17 43057063 CACCAAGGTCCAAAGCGAGCAAGAGAATCCCAGGACAGAAAGGTAAAGCTCCCTCCCTCAA 132630266 26193 NM_000390.3(CHM):c.877C>T (p.Arg293Ter) CHM Dec 12, 2017 Human Phenotype Ontology:HP:0001139,MedGen:C0008525,OMIM:303100,Orphanet:ORPHA180,SNOMED CT:75241009;MedGen:CN517202 Choroideremia;not provided germline X 85957918 AATAGCAAACAACTTACTATGGTAGAAAAGCGAATGCTAATGAAATTTCTTACATTTTGTA 797045201 206606 NM_024531.4(SLC52A2):c.865C>T (p.Leu289=) SLC52A2 Mar 17, 2015 MedGen:C3553538,OMIM:614707 Brown-Vialetto-Van Laere syndrome 2 germline 8 144360357 CTGCTGGGCCTGTTGGCCGCCACCAACGCGCTGACCAATGGCGTGCTGCCTGCCGTGCAGA 187063864 247519 NM_007255.2(B4GALT7):c.421C>T (p.Arg141Trp) B4GALT7 Dec 22, 2017 MedGen:C1869122,OMIM:130070,Orphanet:ORPHA75496;MedGen:CN517202 Ehlers-Danlos syndrome progeroid type;not provided germline 5 177607309 CCAGCCTTGCCCACCCTGCACAGGTTCAACCGGGCAGCGCTCATCAACGTGGGCTTCCTGG 377153250 232383 NM_000465.3(BARD1):c.1216C>T (p.Arg406Ter) BARD1 Jul 12, 2017 MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C0027672,SNOMED CT:699346009 Familial cancer of breast;Hereditary cancer-predisposing syndrome germline 2 214780658 CCTTCTACATTAAGTAGTTCAAGTTACAGGCGAGTGATGTCTAGTCCCTCAGCAATGAAGC 80356476 21403 NM_002977.3(SCN9A):c.2572C>T (p.Leu858Phe) SCN9A Aug 26, 2008 MedGen:C0014805,OMIM:133020,Orphanet:ORPHA90026,SNOMED CT:403390002 Primary erythromelalgia unknown 2 166277252 ATTGGTAACTCAGTAGGGGCTCTAGGTAACCTCACCTTAGTGTTGGCCATCATCGTCTTCA 1114167319 247441 NM_003483.4(HMGA2):c.193C>T (p.Gln65Ter) HMGA2 - Gene:140821,MedGen:C0175693,OMIM:180860,Orphanet:ORPHA813,SNOMED CT:15069006 Russell-Silver syndrome de novo 12 65828082 AGCAAAAACAAGAGTCCCTCTAAAGCAGCTCAAAAGGTGAGATTTCTCAAGTCAAGCTCTC 398124478 102281 NM_138694.3(PKHD1):c.2341C>T (p.Arg781Ter) PKHD1 Dec 07, 2017 MedGen:C0085548,OMIM:263200,Orphanet:ORPHA731,SNOMED CT:28770003 Autosomal recessive polycystic kidney disease germline;maternal 6 52048558 TCTGGACTGGTCCTGGTGACGACACAGAGACGACAGCGGACAAGTCCACCTCTAGGAGGAC 104886286 36096 NM_000495.4(COL4A5):c.4687C>T (p.Arg1563Ter) COL4A5 Jan 25, 2017 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917;MedGen:CN517202 Alport syndrome, X-linked recessive;not provided germline X 108692924 AAGGGCCAGAGCATCCAGCCATTCATTAGTCGGTAAGGCATTGATTTAGCTGTGACTTTTA 1064797027 407633 NM_007327.3(GRIN1):c.1955C>T (p.Ala652Val) GRIN1 Mar 21, 2017 MedGen:CN517202 not provided germline 9 137162681 TCATCGTGGCCTCCTACACCGCCAACCTGGCGGCCTTCCTGGTGCTGGACCGGCCGGAGGA 141913727 376530 NM_002734.4(PRKAR1A):c.535C>T (p.Gln179Ter) PRKAR1A Jun 04, 2015 MedGen:C0406810,Orphanet:ORPHA1359;MedGen:CN517202 Carney complex;not provided germline;unknown 17 68524944 GATGAAGGGGATAACTTCTATGTGATTGATCAAGGAGAGACGGATGTAAGATTTACCAATA 199422209 33004 NM_001127701.1(SERPINA1):c.1178C>T (p.Pro393Leu) SERPINA1 Sep 09, 2016 MedGen:C0221757,OMIM:613490,Orphanet:ORPHA60,SNOMED CT:30188007;na Alpha-1-antitrypsin deficiency;PI M(HEERLEN) germline;unknown 14 94378528 CTATCCCCCCCGAGGTCAAGTTCAACAAACCCTTTGTCTTCTTAATGATTGAACAAAATAC 146579504 170943 NM_030777.3(SLC2A10):c.691C>T (p.Arg231Trp) SLC2A10 Oct 06, 2014 MedGen:C1859726,OMIM:208050,Orphanet:ORPHA3342;MedGen:CN517202 Arterial tortuosity syndrome;not provided germline 20 46725727 CTCTTCAGGGCACGCGATAACATGCGAGGCCGGACCACAGTGGGCCTGGGGCTGGTGCTCT 754914260 185692 NM_005215.3(DCC):c.823C>T (p.Arg275Ter) DCC Jul 03, 2017 MedGen:C0175754,OMIM:217990,Orphanet:ORPHA200;MedGen:C1834870,OMIM:157600 Corpus callosum agenesis;Mirror movements 1 germline 18 52923832 GGCTATCCTCCACCAAGTTTTACCTGGTTACGAGGCGAGGAAGTCATCCAACTCAGGTATT 63750635 29301 NM_016835.4(MAPT):c.1910C>T (p.Ser637Phe) MAPT Mar 01, 2002 MedGen:C0236642,OMIM:172700,SNOMED CT:13092008;MedGen:CN517202 Pick's disease;not provided germline 17 46014286 ACAAACCAGTTGACCTGAGCAAGGTGACCTCCAAGTGTGGCTCATTAGGCAACATCCATCA 397516672 53372 NM_001399.4(EDA):c.730C>T (p.Arg244Ter) EDA Apr 22, 2015 Human Phenotype Ontology:HP:0007607,MedGen:C1706004,Orphanet:ORPHA238468;MedGen:CN517202 Hypohidrotic ectodermal dysplasia;not provided germline X 70029527 TTTGCAGGTGCTGCTGATAAAGCTGGAACTCGAGAAAACCAGGTTGGCTGGGGATTGCTCT 104893678 17079 NM_032146.5(ARL6):c.364C>T (p.Arg122Ter) ARL6 Sep 01, 2004 MedGen:C1859564,OMIM:600151 Bardet-Biedl syndrome 3 germline 3 97788004 TTATTTTCTCTTTTAGATATTAAACACCGTCGAATTCCAATCTTATTCTTTGCAAATAAAA 397514392 36386 NM_000060.4(BTD):c.896C>T (p.Ala299Val) BTD Dec 04, 2012 MedGen:C0220754,OMIM:253260,Orphanet:ORPHA79241,SNOMED CT:8808004 Biotinidase deficiency not provided 3 15644752 CTGTTGCCTTTGGCATCAACGTTCTGGCAGCTAATGTCCACCACCCAGTTCTGGGGATGAC 397515625 79352 NM_000394.3(CRYAA):c.61C>T (p.Arg21Trp) CRYAA Jan 09, 2015 MedGen:CN071376;Human Phenotype Ontology:HP:0000519,MedGen:C1842324 Cataract, autosomal dominant, multiple types, with microcornea;Congenital cataract germline;inherited 21 43169160 AAGCGCACCCTGGGGCCCTTCTACCCCAGCCGGCTGTTCGACCAGTTTTTCGGCGAGGGCC 121907924 18515 NM_000280.4(PAX6):c.613C>T (p.Gln205Ter) PAX6 Feb 20, 2017 MedGen:C1833797,OMIM:165550;MedGen:CN517202 Optic nerve hypoplasia, bilateral;not provided germline 11 31794699 GAAGATTCAGATGAGGCTCAAATGCGACTTCAGCTGAAGCGGAAGCTGCAAAGAAATAGAA 121909091 22320 NM_001005360.2(DNM2):c.1393C>T (p.Arg465Trp) DNM2 Jun 21, 2017 MedGen:CN221282;MedGen:C1834558,OMIM:160150,Orphanet:ORPHA169189;MedGen:CN517202 Myopathy, centronuclear;Myopathy, centronuclear, 1;not provided germline 19 10798543 GAGACAGAGCGAATCGTCACCACTTACATCCGGGAACGGGAGGGGAGAACGAAGGACCAGG 794728364 197300 NM_000238.3(KCNH2):c.1096C>T (p.Arg366Ter) KCNH2 Jan 03, 2017 MedGen:CN517202 not provided germline 7 150957323 CGTGAGATCATAGCACCTAAGATAAAGGAGCGAACCCACAATGTCACTGAGAAGGTCACCC -1 474701 NM_002485.4(NBN):c.2041C>T (p.Gln681Ter) NBN Aug 31, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 8 89946169 AATCCATCTGGCATAAATGATGATTATGGTCAACTAAAAAATTTCAAGAAATTCAAAAAGG 869025495 224184 NM_014625.3(NPHS2):c.353C>T (p.Pro118Leu) NPHS2 Sep 28, 2015 Human Phenotype Ontology:HP:0000093,MedGen:C0033687 Proteinuria germline 1 179564715 TTTCCCTGCTCTTCATCATCATGACCTTCCCTTTTTCCATCTGGTTCTGCGTAAAGGTGAG 387907313 45875 NM_006516.2(SLC2A1):c.694C>T (p.Arg232Cys) SLC2A1 May 15, 2014 MedGen:C3553859,OMIM:614847;MedGen:CN517202 Epilepsy, idiopathic generalized, susceptibility to, 12;not provided germline 1 42929766 CCTCCGGTCCCCCCAGTGCTAAAGAAGCTGCGCGGGACAGCTGACGTGACCCATGACCTGC 137853312 26800 NM_001110556.1(FLNA):c.3557C>T (p.Ser1186Leu) FLNA Nov 01, 2015 MedGen:C0265293,OMIM:305620,Orphanet:ORPHA1826,SNOMED CT:62803002;MedGen:CN517202 Frontometaphyseal dysplasia;not provided germline X 154360238 GGGAGGTGGGCCAATTCCAAGTGGACTGCTCGAGCGCGGGCAGCGCGGAGCTGACCATTGA 864622636 221821 NM_000077.4(CDKN2A):c.148C>T (p.Gln50Ter) CDKN2A Apr 14, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1512419;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Hereditary cutaneous melanoma;not provided germline 9 21974680 GCACCGAATAGTTACGGTCGGAGGCCGATCCAGGTGGGTAGAGGGTCTGCAGCGGGAGCAG -1 417139 NM_019098.4(CNGB3):c.301C>T (p.Gln101Ter) CNGB3 Mar 27, 2017 MedGen:C1849792,OMIM:262300 Achromatopsia 3 germline 8 86726568 GCAGCAGAACCAACTGGAACAGTGCCAGAGCAGAAGGAAATGGACCCCGGGAAAGAAGGTC 568609861 264724 NM_001942.3(DSG1):c.724C>T (p.Arg242Ter) DSG1 Feb 28, 2017 MedGen:CN517202 not provided germline 18 31333628 CAGTATGCTCTTGCTGTAAGAGGCTCTGACCGAGATGGCGGGGCAGATGGCATGTCAGCGG 377046630 195022 NM_025074.6(FRAS1):c.370C>T (p.Arg124Ter) FRAS1 Feb 04, 2015 MedGen:C0265233,OMIM:219000,SNOMED CT:204102004 Cryptophthalmos syndrome germline 4 78252452 AGTGTGTGCTCTTGCAATCATGGGGAAGTCCGATGTACCCCCCAACCATGCCCACCGCTGT 797044874 205228 NM_015265.3(SATB2):c.847C>T (p.Arg283Ter) SATB2 Oct 24, 2017 MeSH:D030342,MedGen:C0950123;MedGen:CN517202 Inborn genetic diseases;not provided germline 2 199349027 CACAGCCAAATTCACCACAGTACTCCAATCCGAAACCAAGTGCCCGCATTACAGCCCATCA -1 433019 NM_022650.2(RASA1):c.1504C>T (p.Arg502Ter) RASA1 Sep 26, 2016 MedGen:CN169374 not specified germline 5 87376416 TCCCAAGTATTTATGCGCTGCCAGTTGAGCCGATTACAGAAAGGGCATGCCACAGATGAAT 786203986 185671 NM_052867.3(NALCN):c.1768C>T (p.Leu590Phe) NALCN May 19, 2015 MedGen:C4225398,OMIM:616266 Congenital contractures of the limbs and face, hypotonia, and developmental delay de novo;germline 13 101176371 TTTCATTGTTATTTCACCATTTTATAGATCCTCCTGAGTTTGTTTGTTGCTGTTATTTTGG -1 482043 NM_014252.3(SLC25A15):c.22C>T (p.Gln8Ter) SLC25A15 Nov 16, 2017 MedGen:CN517202 not provided germline 13 40793248 TGGGCAAACATGAAATCCAATCCTGCTATCCAGGCTGCCATTGACCTCACAGCGGGGGCTG 398123017 51188 NM_016434.3(RTEL1):c.2920C>T (p.Arg974Ter) RTEL1 Jun 16, 2016 MedGen:C0265965,Orphanet:ORPHA1775,SNOMED CT:74911008;MedGen:C3554656,OMIM:615190;MedGen:C1800706,OMIM:178500,Orphanet:ORPHA79126,SNOMED CT:28168000 Dyskeratosis congenita;Dyskeratosis congenita, autosomal recessive, 5;Idiopathic fibrosing alveolitis, chronic form germline;inherited 20 63693211 TTTGAGGAGGTCTGTATCCAGCTGACAGGACGAGGCTGTGGCTATCGGCCTGAGCACAGCA 1057520734 369983 NM_017780.3(CHD7):c.1123C>T (p.Gln375Ter) CHD7 May 12, 2015 MedGen:CN517202 not provided germline 8 60742555 CAGCCCATCCACCCCAGTGGCTCACTTAACCAAATGAACACACAAACTATGCATCCTTCAC 923052172 360079 NM_002834.4(PTPN11):c.1051C>T (p.Arg351Ter) PTPN11 Jul 23, 2015 MedGen:CN517202 not provided germline 12 112477974 TTTTGGCGGATGGTGTTCCAAGAAAACTCCCGAGTGATTGTCATGACAACGAAAGAAGTGG 387906686 38843 NM_021007.2(SCN2A):c.788C>T (p.Ala263Val) SCN2A Jun 05, 2017 MedGen:C1843140,OMIM:607745,Orphanet:ORPHA140927;MedGen:C3150987,OMIM:613721;Human Phenotype Ontology:HP:0200134,MedGen:C0543888;MedGen:CN517202 Benign familial neonatal-infantile seizures;Early infantile epileptic encephalopathy 11;Epileptic encephalopathy;not provided de novo;germline 2 165310413 TCTTGACTGTGTTCTGTCTAAGCGTGTTTGCGCTAATAGGATTGCAGTTGTTCATGGGCAA 532757890 188955 NM_004826.3(ECEL1):c.1210C>T (p.Arg404Cys) ECEL1 Jun 01, 2016 MedGen:C3554415,OMIM:615065,Orphanet:ORPHA329457;MedGen:CN517202 Arthrogryposis, distal, type 5d;not provided germline 2 232484198 CCCAGGGTCCTGCACAACTACCTGGTGTGGCGCGTGGTGGTGGTCCTGAGTGAACACCTGT 794729277 199168 NM_001256850.1(TTN):c.55198C>T (p.Gln18400Ter) TTN Aug 12, 2013 MedGen:CN517202 not provided germline 2 178591698 ACAAACTTAGAGTGTGTGGTTACTGGACTACAACAAGGAAAGACCTATAGATTCCGTGTAA 587777576 150465 NM_022168.3(IFIH1):c.1114C>T (p.Leu372Phe) IFIH1 Jul 03, 2014 MedGen:C3888244,OMIM:615846 Aicardi-goutieres syndrome 7 germline 2 162282558 CATTTTTTTAAGGTACTGCTAGTTGAACAGCTCTTCCGCAAGGAGTTCCAACCATTTTTGA 587779774 132666 NM_001101.4(ACTB):c.359C>T (p.Thr120Ile) ACTB Sep 17, 2015 MedGen:C1855722,OMIM:243310,OMIM:608578,Orphanet:ORPHA2995 Baraitser-Winter syndrome 1 germline 7 5529165 TGAACCCCAAGGCCAACCGCGAGAAGATGACCCAGGTGAGTGGCCCGCTACCTCTTCTGGT -1 483643 NM_004656.3(BAP1):c.1174C>T (p.Gln392Ter) BAP1 Jul 11, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 3 52404529 GGCCGCAGCCGAGTTCCAGTCCGCCCACCCCAGCAGTACTCAGATGATGAGGATGACTATG 746887949 424412 NM_003901.3(SGPL1):c.1513C>T (p.Arg505Ter) SGPL1 Jul 21, 2017 MedGen:CN339707,OMIM:617575 NEPHROTIC SYNDROME 14 germline 10 70876608 CGAGTAGCTATACAATTCCTAAAGGACATTCGAGAATCTGTCACTCAAATCATGAAGAATC 775946081 239732 NM_001369.2(DNAH5):c.8029C>T (p.Arg2677Ter) DNAH5 Jul 31, 2017 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244 Ciliary dyskinesia germline 5 13793710 TGTCTTTTGTAGGTTACGAATGAGATAGTGCGACAGCTGATGGAACAAAATGGATTCTATA 749341977 488000 NM_004646.3(NPHS1):c.802C>T (p.Arg268Ter) NPHS1 Jul 14, 2016 MedGen:C0403399,OMIM:256300,Orphanet:ORPHA839,SNOMED CT:197601003 Finnish congenital nephrotic syndrome germline 19 35849274 GGACAGAGCTTGGAGCTGCCGTGCGTGGCCCGAGGGGGTAATCCCTTAGCCACACTGCAGT 767707248 259728 NM_173076.2(ABCA12):c.178C>T (p.Arg60Ter) ABCA12 Apr 06, 2016 MedGen:CN517202 not provided germline 2 215064205 GTTTTTTTAATTTTAGGTTACCTCGCACCTCGAAACCTTCCTAGTACTGGATTCTTTCCAT 886043831 272452 NM_000346.3(SOX9):c.1249C>T (p.Gln417Ter) SOX9 Jun 16, 2016 MedGen:C1861922,OMIM:114290,Orphanet:ORPHA140,SNOMED CT:74928006 Camptomelic dysplasia germline 17 72124106 TACAGCGAGCAGCAGCAGCACTCGCCCCAACAGATCGCCTACAGCCCCTTCAACCTCCCAC 730880297 178850 NM_000888.4(ITGB6):c.1846C>T (p.Arg616Ter) ITGB6 Feb 13, 2015 MedGen:C4015557,OMIM:616221 Amelogenesis imperfecta, type IH germline 2 160126416 AACCCTGGAGCCTCAGGACCAACCTGTGAACGATGTCCTACCTGTGGTGACCCCTGTAACT 876659802 236459 NM_000546.5(TP53):c.833C>T (p.Pro278Leu) TP53 May 31, 2016 Human Phenotype Ontology:HP:0030078,MeSH:C538231,MedGen:C0152013;Human Phenotype Ontology:HP:0011459,MedGen:C0152018,Orphanet:ORPHA70482;MeSH:D015179,MedGen:CN236642;MedGen:C0027672,SNOMED CT:699346009;MeSH:C562393,MedGen:C0151779,SNOMED CT:93655004;MedGen:C0153574,Orphanet:ORPHA213569;Human Phenotype Ontology:HP:0006775,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:ORPHA29073,SNOMED CT:109989006,SNOMED CT:55921005;Human Phenotype Ontology:HP:0030692,MeSH:D001932,MedGen:C0006118,SNOMED CT:126952004;Human Phenotype Ontology:HP:0100013,MeSH:D001943,MedGen:C1458155,Orphanet:ORPHA180250,SNOMED CT:126926005;MedGen:C0279663;Human Phenotype Ontology:HP:0006725,MedGen:C0281361;Human Phenotype Ontology:HP:0030359,MedGen:C0149782;MeSH:C535575,MedGen:C1168401,OMIM:275355,Orphanet:ORPHA67037;Human Phenotype Ontology:HP:0006739,MedGen:C0553723 Adenocarcinoma of lung;Carcinoma of esophagus;Colorectal Neoplasms;Hereditary cancer-predisposing syndrome;Malignant melanoma of skin;Malignant neoplasm of body of uterus;Multiple myeloma;Neoplasm of brain;Neoplasm of the breast;Ovarian Serous Cystadenocarcinoma;Pancreatic adenocarcinoma;Squamous cell carcinoma of lung;Squamous cell carcinoma of the head and neck;Squamous cell carcinoma of the skin germline;somatic 17 7673787 ACAGCTTTGAGGTGCGTGTTTGTGCCTGTCCTGGGAGAGACCGGCGCACAGAGGAAGAGAA 121909084 22347 NM_004560.3(ROR2):c.550C>T (p.Arg184Cys) ROR2 Sep 01, 2005 MedGen:C1849334,OMIM:268310,Orphanet:ORPHA1507 Robinow syndrome, autosomal recessive germline 9 91737463 TGCCAGCCTTACCGGGGAATTGCCTGTGCACGCTTCATTGGCAACCGGACCATTTATGTGG 763481375 259723 NM_173076.2(ABCA12):c.2140C>T (p.Arg714Ter) ABCA12 Mar 16, 2017 MedGen:CN517202 not provided germline 2 215011631 TTTGTCTCACAGGCAATGTACAGAAGCAACCGAATGAACACACCACAAGGATCATTTAGCA 1057520746 365423 NM_000969.4(RPL5):c.535C>T (p.Arg179Ter) RPL5 Jun 03, 2015 MedGen:CN517202 not provided germline 1 92837463 AAATATGAATAACTTTATTTTAGTACCAAACGATTCCCTGGTTATGATTCTGAAAGCAAGG 121908665 21314 NM_002335.3(LRP5):c.1708C>T (p.Arg570Trp) LRP5 Nov 16, 2001 MedGen:C0432252,OMIM:259770,Orphanet:ORPHA2788,SNOMED CT:254112001 Osteoporosis with pseudoglioma germline 11 68403606 TGGACTGACTGGCAGCGCCGCAGCATCGAGCGGGTGCACAAGGTCAAGGCCAGCCGGGACG 376128990 215031 NM_052845.3(MMAB):c.571C>T (p.Arg191Trp) MMAB Oct 20, 2016 MedGen:C1855102,OMIM:251110,Orphanet:ORPHA79311;MedGen:CN517202 Methylmalonic aciduria cblB type;not provided germline 12 109561053 GCGCTGCATTTCTGCCGGGCCGTGTGCCGCCGGGCCGAGAGACGGTAAGAGGGCTGGAGAG 387906977 39649 NM_014679.4(CEP57):c.241C>T (p.Arg81Ter) CEP57 Jun 01, 2011 MedGen:C3279843,OMIM:614114 Mosaic variegated aneuploidy syndrome 2 germline 11 95812970 TCTGCTCTTAAGAATCTTCAAGATAAGATTCGACGCTTGGAACTTGAGAGGATTCAGGCAG 782308324 232151 NM_001456.3(FLNA):c.7231C>T (p.Arg2411Ter) FLNA Jan 08, 2016 MedGen:CN517202 not provided germline X 154350109 ACCCACATCCCTGGAAGCCCCTTCAAGATCCGAGTTGGGGAGCCTGGGCATGGAGGGGACC 138228629 264740 NM_018451.4(CENPJ):c.1696C>T (p.Arg566Ter) CENPJ Dec 30, 2015 MedGen:CN517202 not provided germline 13 24906342 TCTCTTCAGAAAAAGTTAGAGACTTGGGAACGAGAAAAGGAAAAGGAAAATTTGGAATTAG 121918540 22897 NM_006949.3(STXBP2):c.1430C>T (p.Pro477Leu) STXBP2 Sep 01, 2010 MedGen:C2751293,OMIM:613101 Hemophagocytic lymphohistiocytosis, familial, 5 germline 19 7646322 AGCCCACCTATCAGCTGTCCCGCTGGACCCCGGTCATCAAGGATGTAATGGAGGTACTGGG 104894546 33357 NM_001614.3(ACTG1):c.791C>T (p.Pro264Leu) ACTG1 Nov 01, 2003 MedGen:C1858172,OMIM:604717 Deafness, autosomal dominant 20 germline 17 81511199 GGTTCCGGTGTCCGGAGGCGCTGTTCCAGCCTTCCTTCCTGGGTAGGTGTTGTGAGCTAAA 121917715 28869 NM_000168.5(GLI3):c.1486C>T (p.Gln496Ter) GLI3 Oct 01, 1997 MedGen:C0265306,OMIM:175700,SNOMED CT:32985001 Greig cephalopolysyndactyly syndrome germline 7 42023479 GGCTGCGCGAGGGAGTTCGACACCCAAGAGCAGCTTGTGCACGTAAGTGGATGGTATTCAG 28942097 18430 NM_147196.2(TMIE):c.250C>T (p.Arg84Trp) TMIE Jun 01, 2009 MedGen:C1832992,OMIM:600971 Deafness, autosomal recessive 6 germline 3 46709164 CTGTGCTGTGTCTTCAACTGTCGTGTGCCACGGACCCGGAAGGAGATCGAAGCCCGGTACC 398123275 98585 NM_000252.2(MTM1):c.70C>T (p.Arg24Ter) MTM1 Feb 27, 2013 MedGen:C0410203,OMIM:310400,Orphanet:ORPHA596,SNOMED CT:46804001 Severe X-linked myotubular myopathy germline X 150596504 CTGATGCATCTGTTTTGTTTCTAGACGTCTCGAGATGGAGTCAATCGAGATCTCACTGAGG 17860403 22803 NM_032977.3(CASP10):c.853C>T (p.Leu285Phe) CASP10 Sep 08, 2011 MedGen:C1858968,OMIM:603909 Autoimmune lymphoproliferative syndrome, type 2A germline 2 201208114 GTGTACAGGATGAATCGGAACCACAGAGGCCTCTGTGTCATTGTCAACAACCACAGCTTTA 45544633 175594 NM_000257.3(MYH7):c.4498C>T (p.Arg1500Trp) MYH7 Oct 03, 2016 Human Phenotype Ontology:HP:0001638,MedGen:C0878544,Orphanet:ORPHA167848,SNOMED CT:85898001;Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569 Cardiomyopathy;Hypertrophic cardiomyopathy germline 14 23417174 GAGTCCCTGGAACATCTGGAGACCTTCAAGCGGGAGAACAAAAACCTGCAGGGTGTGCTGG 180177091 132277 NM_024675.3(PALB2):c.751C>T (p.Gln251Ter) PALB2 Sep 30, 2016 MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Familial cancer of breast;Hereditary cancer-predisposing syndrome;not provided germline 16 23635795 AATTTCACCAGGGCGACTACAGTTCCTTTACAGACTCTATCAGATAGCGGTAGTAGTCAGC 104894289 28183 NM_000448.2(RAG1):c.1186C>T (p.Arg396Cys) RAG1 Mar 14, 2017 MedGen:C1801959,OMIM:603554,Orphanet:ORPHA39041,SNOMED CT:307650006;MedGen:CN517202 Histiocytic medullary reticulosis;not provided germline 11 36574490 TTTGTGCACATTAATAAAGGGGGCCGGCCCCGCCAACATCTTCTGTCGCTGACTCGGAGAG 797044832 204284 NM_020533.2(MCOLN1):c.235C>T (p.Gln79Ter) MCOLN1 Jul 30, 2015 MedGen:C0238286,OMIM:252650,Orphanet:ORPHA578,SNOMED CT:111384001 Mucolipidosis type IV germline 19 7525164 CAAGTGGTCAAGATCCTGGTGGTCACGGTGCAGGTGAGGCCAGCCAAGCAGGGGCCCCAGC -1 487755 NM_000053.3(ATP7B):c.3247C>T (p.Leu1083Phe) ATP7B Nov 21, 2016 MedGen:C0019202,OMIM:277900,Orphanet:ORPHA905,SNOMED CT:88518009 Wilson disease germline 13 51942551 CCTCTTCCTCTCTTTCCACCTTCCCAGGAACTTGGAACAGAGACCTTGGGATACTGCACGG 587779399 106586 NM_000147.4(FUCA1):c.790C>T (p.Arg264Ter) FUCA1 - MedGen:C0016788,OMIM:230000,Orphanet:ORPHA349,SNOMED CT:64716005 Fucosidosis inherited 1 23854539 CCTCCTTAGGATGAGGTGGTAGTAAATGACCGATGGGGTCAGAACTGTTCCTGTCACCATG 786204969 187614 NM_003159.2(CDKL5):c.1375C>T (p.Gln459Ter) CDKL5 Mar 13, 2014 MedGen:C2748910,Orphanet:ORPHA3095 Atypical Rett syndrome de novo X 18604299 GAAAGCTCTCAAAGCAAAGCTGGGACACTGCAGCCCAATGAAAAGCAGAGTCGGCATAGCT 754368658 216922 NM_002582.3(PARN):c.1045C>T (p.Arg349Trp) PARN Nov 01, 2015 MedGen:C4225356,OMIM:616353 Dyskeratosis congenita, autosomal recessive 6 germline 16 14584383 AACAACACATCCCTTGCGGAATTGGAAAAGCGGTTAAAAGAGACACCTTTCAACCCTCCTA 121964865 27354 NM_001014796.2(DDR2):c.2138C>T (p.Thr713Ile) DDR2 Jun 01, 2010 MedGen:C1849011,OMIM:271665,Orphanet:ORPHA93358 Spondylometaepiphyseal dysplasia short limb-hand type germline 1 162776225 CTCTTAATTTTGTTCACCGAGATCTGGCCACACGAAACTGTTTAGTGGGTAAGAACTACAC 11544803 15768 NM_014402.4(UQCRQ):c.134C>T (p.Ser45Phe) UQCRQ Jun 16, 2015 MedGen:C3554607,OMIM:615159;MedGen:CN517202 Mitochondrial complex III deficiency, nuclear type 4;not provided germline 5 132867015 TCCCCAATGTTCTGCGCCGCATTCGGGAGTCTTTCTTTCGCGTGGTGCCGCGTGAGTGCCT 398123711 100056 NM_003482.3(KMT2D):c.12406C>T (p.Gln4136Ter) KMT2D Nov 19, 2012 MedGen:CN030661,OMIM:147920 Kabuki syndrome 1 germline 12 49032299 GAGGCCTCATCTGTGCCCCACCTGCTGGCTCAGCCCTCTGTTTCCTTAGGGGATCAGCCTG 886039866 262393 NM_001065.3(TNFRSF1A):c.463C>T TNFRSF1A Oct 01, 2016 MedGen:C0004943,OMIM:109650,Orphanet:ORPHA117,SNOMED CT:310701003 Behcet's syndrome germline 12 6333376 AATTGCAGCCTCTGCCTCAATGGGACCGTGCACCTCTCCTGTGAGCGCAGCTCTCCTGAGG 387907208 40611 NM_005691.3(ABCC9):c.3460C>T (p.Arg1154Trp) ABCC9 Jul 11, 2017 MedGen:C1837839,OMIM:608569;MedGen:C0795905,OMIM:239850,Orphanet:ORPHA1517 Dilated cardiomyopathy 1O;Hypertrichotic osteochondrodysplasia de novo;germline 12 21842327 GTTGCCTTTTATTTTATCCAGAAATACTTTCGGGTTGCCTCTAAGTAAGTAAAACAGCATC 121918267 17185 NM_133433.3(NIPBL):c.5167C>T (p.Arg1723Ter) NIPBL Jun 27, 2013 MedGen:CN029798,OMIM:122470 Cornelia de Lange syndrome 1 germline 5 37020615 ACTGGCCAAATTATGCATCGAGCTGAAAACCGAAAAAAGTTTCTTAGAAGCATTATCAAAA -1 447543 NM_024529.4(CDC73):c.376C>T (p.Arg126Ter) CDC73 Jul 25, 2017 Human Phenotype Ontology:HP:0006780,MedGen:C0687150,OMIM:608266,Orphanet:ORPHA143,SNOMED CT:255037004 Parathyroid carcinoma germline 1 193135542 TTATTTACTTCTCTTTCTTTTATAGTCAAACGAGCTGCAGATGAAGTTTTAGCAGAAGCAA 864321717 217281 NM_006086.3(TUBB3):c.1138C>T (p.Arg380Cys) TUBB3 Aug 01, 2016 MedGen:C2748801,OMIM:600638;MedGen:CN517202 Fibrosis of extraocular muscles, congenital, 3a, with or without extraocular involvement;not provided germline 16 89935589 AACAGCACGGCCATCCAGGAGCTGTTCAAGCGCATCTCCGAGCAGTTCACGGCCATGTTCC 104894080 19239 NM_018972.2(GDAP1):c.715C>T (p.Leu239Phe) GDAP1 Nov 11, 2016 MedGen:C1842983,OMIM:607831,Orphanet:ORPHA101097;MedGen:C1842197,OMIM:608340,Orphanet:ORPHA217055;MedGen:C1859198,OMIM:214400,Orphanet:ORPHA99948;Human Phenotype Ontology:HP:0003236,MedGen:C0241005,OMIM:123320;Human Phenotype Ontology:HP:0003155,MedGen:C0750857;Human Phenotype Ontology:HP:0003477,MedGen:C1263857;Human Phenotype Ontology:HP:0001271,MedGen:C0152025;Human Phenotype Ontology:HP:0000763,MedGen:C0151313;MedGen:CN517202 Charcot-Marie-Tooth disease type 2K;Charcot-Marie-Tooth disease, recessive intermediate A;Charcot-Marie-Tooth disease, type 4A;Creatine phosphokinase, elevated serum;Elevated alkaline phosphatase;Peripheral axonal neuropathy;Polyneuropathy;Sensory neuropathy;not provided germline;unknown 8 74364005 CTCTAATTAGAAGAGGGCCAGCAACCTTGGCTCTGCGGTGAATCCTTCACCCTGGCAGACG 28936703 22731 NM_003865.2(HESX1):c.509C>T (p.Ser170Leu) HESX1 Jan 01, 2001 MedGen:C4016761 Septooptic dysplasia, mild germline 3 57198246 GTGCAAAACTGAAAAGGTCCCATAGAGAATCACAGTTTCTAATGGCGAAAAAAAATTTCAA 121434254 18346 NM_000383.3(AIRE):c.769C>T (p.Arg257Ter) AIRE Feb 06, 2017 MedGen:C0085859,OMIM:240300,Orphanet:ORPHA3453,SNOMED CT:11244009;MedGen:CN517202 Polyglandular autoimmune syndrome, type 1;not provided germline;unknown 21 44289773 CGCAGCAGCAGTGGCCCGAAGCCTCTGGTTCGAGCCAAGGGAGCCCAGGGCGCTGCCCCCG 398122419 94579 NM_133645.2(MTO1):c.1307C>T (p.Thr436Ile) MTO1 Nov 01, 2013 MedGen:C3553529,OMIM:614702,Orphanet:ORPHA314637 Combined oxidative phosphorylation deficiency 10 germline 6 73480777 GACTCTTCTTTGCTGGACAGATCAATGGCACCACTGGTTATGAGGAAGCTGCAGCTCAAGT 121917759 27650 NM_005343.3(HRAS):c.437C>T (p.Ala146Val) HRAS May 31, 2016 Human Phenotype Ontology:HP:0004808,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:ORPHA519,SNOMED CT:17788007;Human Phenotype Ontology:HP:0030078,MeSH:C538231,MedGen:C0152013;MedGen:C0278701;MeSH:D015179,MedGen:CN236642;MedGen:C0587248,OMIM:218040,Orphanet:ORPHA3071,SNOMED CT:309776008;Human Phenotype Ontology:HP:0006775,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:ORPHA29073,SNOMED CT:109989006,SNOMED CT:55921005;MeSH:D002583,MedGen:CN236667 Acute myeloid leukemia;Adenocarcinoma of lung;Adenocarcinoma of stomach;Colorectal Neoplasms;Costello syndrome;Multiple myeloma;Uterine cervical neoplasms germline;somatic 11 533466 GCTACGGCATCCCCTACATCGAGACCTCGGCCAAGACCCGGCAGGTGAGGCAGCTCTCCAC -1 457065 NM_194456.1(KRIT1):c.1417C>T (p.Gln473Ter) KRIT1 Jun 13, 2017 MedGen:C1861784,OMIM:116860 Cerebral cavernous malformation germline 7 92222048 TTATAAAAGGAATGATGTTTTTCAGGCCTTCAACTCAAACCATATCATAAACCCTTGCAAC 104886071 35666 NM_000495.4(COL4A5):c.796C>T (p.Arg266Ter) COL4A5 Jul 20, 2017 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917;MedGen:CN517202 Alport syndrome, X-linked recessive;not provided germline X 108580548 CCTACTACTGCATAGGGACTTCCTGGTGACCGAGGGCCTCCTGGACCTCCAGGGATACGTG 281874661 35725 NM_000495.4(COL4A5):c.1219C>T (p.Gln407Ter) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108591111 GGCCCTCCTGGATTTCCTGGAGAAAGGGGTCAGAAAGGTGATGAAGGACCACCTGGAATTT 121434559 31965 NM_000942.4(PPIB):c.451C>T (p.Gln151Ter) PPIB Feb 17, 2011 MedGen:C1850169,OMIM:259440;MedGen:CN517202 Osteogenesis imperfecta type 9;not provided germline;unknown 15 64156802 GCCAACGCAGGCAAAGACACCAACGGCTCCCAGTTCTTCATCACGACAGTCAAGACAGCCT 587781359 150617 NM_005359.5(SMAD4):c.1345C>T (p.Gln449Ter) SMAD4 Sep 20, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 18 51076674 GATTTGCGTCAGTGTCATCGACAGATGCAGCAGCAGGCGGCTACTGCACAAGCTGCAGCAG 138726443 65594 NM_002016.1(FLG):c.7339C>T (p.Arg2447Ter) FLG Oct 30, 2017 MedGen:CN517202 not provided germline 1 152307547 GGAAGACAAGGATCCCACCACAAGCAGGCACGAGACAGCTCCAGGCACTCAACGTCCCAAG 794726867 190185 NM_000921.4(PDE3A):c.1340C>T (p.Ala447Val) PDE3A Jun 01, 2015 Gene:8080,MedGen:C1862170,OMIM:112410,Orphanet:ORPHA1276 Brachydactyly with hypertension germline 12 20616300 TTTCTTCCACTTGGACCACCACCACCTCGGCCACAGGTCTACCCACCTTGGAGCCTGCACC 1057519292 361794 NM_022089.3(ATP13A2):c.364C>T (p.Gln122Ter) ATP13A2 Feb 01, 2017 MedGen:C4310662,OMIM:617225 Spastic paraplegia 78, autosomal recessive germline 1 17004805 ACCTGCTTCCCCAGCCTGGAGCCGTCCCCACAGTCCCAGGCAGAGGATGGCCGGAGCCAGG 199473456 67751 NM_000218.2(KCNQ1):c.674C>T (p.Ser225Leu) KCNQ1 May 22, 2017 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MeSH:D008133,MedGen:C0023976,SNOMED CT:9651007;MedGen:CN517202 Congenital long QT syndrome;Long QT syndrome;not provided germline 11 2571394 TGGGCTCCAAGGGGCAGGTGTTTGCCACGTCGGCCATCAGGTGCGTCTGTGCCACAAGCTC 1057521106 365926 NM_000090.3(COL3A1):c.811C>T (p.Arg271Ter) COL3A1 Jan 03, 2017 MedGen:CN517202 not provided germline 2 188991016 GTTTTATACATTTCCTAGGGCTTCGATGGACGAAATGGAGAAAAGGGTGAAACAGGTGCTC 61753184 105442 NM_000372.4(TYR):c.229C>T (p.Arg77Trp) TYR May 15, 2015 MedGen:C0268494,OMIM:203100,Orphanet:ORPHA79431,SNOMED CT:6483008;MedGen:CN517202 Tyrosinase-negative oculocutaneous albinism;not provided germline;paternal 11 89178182 CCTCAATTTCCCTTCACAGGGGTGGATGACCGGGAGTCGTGGCCTTCCGTCTTTTATAATA 375781731 203609 NM_007254.3(PNKP):c.490C>T (p.Gln164Ter) PNKP Aug 01, 2013 MedGen:CN517202 not provided germline 19 49865135 CTAGTGTTCACCGCAGCTGGGGTGAAACCCCAGGGCAAGGTGAGGGCCACGCCGAGGGCTG 867038717 374842 NM_002693.2(POLG):c.2125C>T (p.Arg709Ter) POLG Dec 14, 2016 MedGen:CN517202 not provided germline 15 89323847 GTGGAGGCTGAGGCCAAGATGGAGAACTTGCGAGCTGCAGTGCCAGGTCAACCCCTAGCTC 119103263 17315 NM_014874.3(MFN2):c.280C>T (p.Arg94Trp) MFN2 Mar 21, 2017 Human Phenotype Ontology:HP:0008066,MedGen:C0241054;Human Phenotype Ontology:HP:0000682,MedGen:C4021800;Human Phenotype Ontology:HP:0000164,MedGen:C0262444;Human Phenotype Ontology:HP:0002293,MedGen:C1860137;MedGen:CN043576;MedGen:C1836485,OMIM:609260,Orphanet:ORPHA99947;Human Phenotype Ontology:HP:0004325,MedGen:CN003826;Human Phenotype Ontology:HP:0002460,MedGen:C1864696;Human Phenotype Ontology:HP:0003457,MedGen:C0476403;Human Phenotype Ontology:HP:0001508,MedGen:C0231246;MedGen:C0393807,OMIM:601152,Orphanet:ORPHA90120,SNOMED CT:128203003;Human Phenotype Ontology:HP:0000953,MedGen:C0162834,Orphanet:ORPHA79375;Human Phenotype Ontology:HP:0000252,MedGen:C0424688;Human Phenotype Ontology:HP:0008404,MedGen:C0221260;Human Phenotype Ontology:HP:0100699,MedGen:C0008767;Human Phenotype Ontology:HP:0004552,MedGen:C3806301;Human Phenotype Ontology:HP:0004322,MedGen:C0349588;MedGen:CN517202 Abnormal blistering of the skin;Abnormality of dental enamel;Abnormality of the teeth;Alopecia of scalp;Charcot-Marie-Tooth disease, type 2;Charcot-Marie-Tooth disease, type 2A2A;Decreased body weight;Distal muscle weakness;EMG abnormality;Failure to thrive;Hereditary motor and sensory neuropathy with optic atrophy;Hyperpigmentation of the skin;Microcephaly;Nail dystrophy;Scarring;Scarring alopecia of scalp;Short stature;not provided germline;unknown 1 11992659 AAAGTGAGAGGCATCAGTGAGGTGCTGGCTCGGAGGCACATGAAAGTGGCTTTTTTTGGCC 587783047 166261 NM_004360.4(CDH1):c.187C>T (p.Arg63Ter) CDH1 Mar 30, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1708349,OMIM:137215,Orphanet:ORPHA26106 Hereditary cancer-predisposing syndrome;Hereditary diffuse gastric cancer germline 16 68801693 CCTGCAGTGAATTTTGAAGATTGCACCGGTCGACAAAGGACAGCCTATTTTTCCCTCGACA 74315442 23435 NM_000100.3(CSTB):c.202C>T (p.Arg68Ter) CSTB Jun 14, 2016 MedGen:C0751785,OMIM:254800,Orphanet:ORPHA308,SNOMED CT:230423006 Unverricht-Lundborg syndrome germline 21 43774297 CACGTCGGCGACGAGGACTTCGTACACCTGCGAGTGTTCCAATCTCTCCCTCATGAAAACA 200503569 98707 NM_000303.2(PMM2):c.323C>T (p.Ala108Val) PMM2 Jul 05, 2017 MedGen:C0349653,OMIM:212065,Orphanet:ORPHA79318,SNOMED CT:277893002;MedGen:CN517202 Carbohydrate-deficient glycoprotein syndrome type I;not provided germline 16 8806383 ATTTAATCAACTACTGTCTGAGCTACATTGCGAAAATTAAACTCCCGAAGAAGAGGTGGGT 121912933 32230 NM_000093.4(COL5A1):c.2374C>T (p.Arg792Ter) COL5A1 Jun 01, 2000 MedGen:C0268335,OMIM:130000,Orphanet:ORPHA287,SNOMED CT:20766005,SNOMED CT:83470009 Ehlers-Danlos syndrome, classic type germline 9 134774901 CCCCAGGGTCCGATTGGCTACCCAGGTCCTCGAGGAGTCAAGGTGAGAGAGACTCACGCCA 727503253 175612 NM_000257.3(MYH7):c.2710C>T (p.Arg904Cys) MYH7 Feb 18, 2016 MedGen:C1834481,OMIM:613426;EFO:EFO_0000407,Human Phenotype Ontology:HP:0001644,MedGen:C0007193,Orphanet:ORPHA217604,SNOMED CT:195021004 Dilated cardiomyopathy 1S;Primary dilated cardiomyopathy germline 14 23424119 GAACAAGACAACCTGGCAGATGCTGAGGAGCGCTGTGATCAGCTGATCAAAAACAAGATTC 769518471 429204 NM_000352.4(ABCC8):c.2992C>T (p.Arg998Ter) ABCC8 Nov 25, 2015 MedGen:C1257959,OMIM:256450,SNOMED CT:360339005;MedGen:CN517202 Persistent hyperinsulinemic hypoglycemia of infancy;not provided germline 11 17407058 ATGCTGCACCAGCGTGCTGAGATCCCATGGCGAGCCTGCGCCAAGTACCTGTCCTCCGCCG 1057523601 373889 NM_001271.3(CHD2):c.4999C>T (p.Gln1667Ter) CHD2 Dec 06, 2016 MedGen:CN517202 not provided germline 15 93020104 TGGGGAAGCGACAGGCACCATCAGTATGAGCAGCACTGGTACAAGGACCACCATTATGGGG 397516463 52805 NM_001001430.2(TNNT2):c.388C>T (p.Arg130Cys) TNNT2 Jul 11, 2017 MedGen:CN230736;MedGen:C1861864,OMIM:115195;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Cardiovascular phenotype;Familial hypertrophic cardiomyopathy 2;Primary familial hypertrophic cardiomyopathy;not provided germline 1 201364369 GTGGGCTTTGCCTCTTCTCCTTAGGAGAGACGTCGGGCAGAGCGGGCCGAGCAGCAGCGCA 587777420 137078 NM_015509.3(NECAP1):c.142C>T (p.Arg48Ter) NECAP1 Dec 01, 2014 MedGen:C4014430,OMIM:615833 Early infantile epileptic encephalopathy 21 germline 12 8089982 TTAGACCAGCCTGATTGGACTGGTCGCCTCCGAATCACTTCAAAAGGGAAGACTGCCTATA 104894909 26465 NM_001129765.1(NSDHL):c.314C>T (p.Ala105Val) NSDHL Feb 01, 2011 MedGen:C0265267,OMIM:308050,Orphanet:ORPHA139,SNOMED CT:17608003 Child syndrome germline X 152858816 TGAAAGGTGTAAACACAGTTTTCCACTGTGCGTCACCCCCACCATCCAGTAACAACAAGGA 104894428 19378 NM_014239.3(EIF2B2):c.512C>T (p.Ser171Phe) EIF2B2 Jun 01, 2003 MedGen:C1847967,Orphanet:ORPHA99853 Ovarioleukodystrophy germline 14 75004815 CCAATGAGGTGATCATGACCATTGGCTTCTCCCGAACAGTAGAGGCCTTCCTCAAAGAGGC 750922282 434502 NM_205768.2(ZBTB18):c.1390C>T (p.Arg464Cys) ZBTB18 Oct 04, 2017 Gene:100190984,MedGen:C2676727,OMIM:612337 Mental retardation, autosomal dominant 22 germline 1 244055164 AAGAGCTTCCAGTACTCGCACAACCTGAGCCGCCATGCCGTGGTGCACACCCGCGAGAAGC 121913344 151858 NM_000546.5(TP53):c.916C>T (p.Arg306Ter) TP53 Sep 18, 2017 MeSH:D015179,MedGen:CN236642;MeSH:D006258,MedGen:C0018671,Orphanet:ORPHA290849;MedGen:C0027672,SNOMED CT:699346009;MedGen:C0085390,Orphanet:ORPHA524,SNOMED CT:428850001;MedGen:CN517202 Colorectal Neoplasms;Head and Neck Neoplasms;Hereditary cancer-predisposing syndrome;Li-Fraumeni syndrome;not provided germline;somatic 17 7673704 CACCACGAGCTGCCCCCAGGGAGCACTAAGCGAGGTAAGCAAGCAGGACAAGAAGCGGTGG 72653170 32386 NM_000088.3(COL1A1):c.3040C>T (p.Arg1014Cys) COL1A1 May 19, 2017 MedGen:C0020497,OMIM:114000,Orphanet:ORPHA1310,SNOMED CT:24752008;MedGen:CN517202 Infantile cortical hyperostosis;not provided germline 17 50188908 GGATTGGCTGGACCCCCTGGTGAATCTGGACGTGAGGTGAGCAGTCCCCAGCCCCCATGCC 1057518956 360918 NM_030751.5(ZEB1):c.973C>T (p.Arg325Ter) ZEB1 Jan 14, 2014 Human Phenotype Ontology:HP:0000501,MedGen:C1962986;Human Phenotype Ontology:HP:0007915,MedGen:C0339284,Orphanet:ORPHA98973,SNOMED CT:29504002;Human Phenotype Ontology:HP:0000572,MedGen:C3665386 Glaucoma;Polymorphous corneal dystrophy;Visual loss unknown 10 31520308 TCTCTTTCAGCATCACCAGGCAGTCCCACACGACCACAGATACGGCAAAAGATAGAGAATA 776686983 455431 NM_001369.2(DNAH5):c.2224C>T (p.Arg742Ter) DNAH5 Aug 07, 2017 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244 Ciliary dyskinesia germline 5 13900241 TCTCCACTGGCAACTTCCCTCTTCCAGAAACGAGATAGATACAAAAGGAACTTCAGTAACA 786201066 181940 NM_000251.2(MSH2):c.1351C>T (p.Gln451Ter) MSH2 Feb 14, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline;unknown 2 47445622 ACTGATCTTCGTTCTGACTTCTCCAAGTTTCAGGAAATGATAGAAACAACTTTAGATATGG 74315401 28434 NM_000311.4(PRNP):c.305C>T (p.Pro102Leu) PRNP Dec 18, 2008 MedGen:C0162534,Orphanet:ORPHA56970;MedGen:C0017495,OMIM:137440,Orphanet:ORPHA356,SNOMED CT:67155006 Genetic prion diseases;Gerstmann-Straussler-Scheinker syndrome germline 20 4699525 GAGGTGGCACCCACAGTCAGTGGAACAAGCCGAGTAAGCCAAAAACCAACATGAAGCACAT 886041459 264989 NM_006086.3(TUBB3):c.689C>T (p.Ser230Leu) TUBB3 Jul 06, 2016 MedGen:CN517202 not provided germline 16 89935140 CCACCTACGGGGACCTCAACCACCTGGTATCGGCCACCATGAGCGGAGTCACCACCTCCTT 1114167547 419645 NM_000038.5(APC):c.3571C>T (p.Gln1191Ter) APC Mar 14, 2013 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline;unknown 5 112839165 TTAAAATATGCCACAGATATTCCTTCATCACAGAAACAGTCATTTTCATTCTCAAAGAGTT 724159973 172098 NM_052874.4(STX1B):c.166C>T (p.Gln56Ter) STX1B Dec 01, 2014 MedGen:C4015395,OMIM:616172 Generalized epilepsy with febrile seizures plus, type 9 germline 16 31001133 CTGTCGGAGGATGTGGAGCAGGTGAAAAAACAGCATAGCGCCATCCTGGCCGCACCCAACC 120074154 17864 NM_017890.4(VPS13B):c.10888C>T (p.Gln3630Ter) VPS13B Jul 01, 2004 MedGen:C0265223,OMIM:216550,Orphanet:ORPHA193,SNOMED CT:56604005 Cohen syndrome germline 8 99854202 GAAAGAGGACCCATCTTCACCACTGCGAGGCAGCTTGTGCACGCCCTGGCAATGCACTATG 398123999 100584 NM_004006.2(DMD):c.583C>T (p.Arg195Ter) DMD Apr 18, 2017 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009;MedGen:C3668940,OMIM:302045;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001;MedGen:CN517202 Becker muscular dystrophy;Dilated cardiomyopathy 3B;Duchenne muscular dystrophy;not provided germline X 32809559 AGTGTGGTTTGCCAGCAGTCAGCCACACAACGACTGGAACATGCATTCAACATCGCCAGAT 132630280 26115 NM_001128834.2(PLP1):c.467C>T (p.Thr156Ile) PLP1 Jan 01, 1991 Human Phenotype Ontology:HP:0003269,MedGen:C0205711,OMIM:312080,Orphanet:ORPHA702,SNOMED CT:64855000 Pelizaeus-Merzbacher disease germline X 103787811 CATGTCAATCATTTTAGTTTGTGGGCATCACCTATGCCCTGACCGTTGTGTGGCTCCTGGT 869312806 226373 NM_004174.3(SLC9A3):c.932C>T (p.Ala311Val) SLC9A3 Oct 06, 2016 MedGen:CN515063,OMIM:616868 Diarrhea 8, secretory sodium, congenital germline 5 484520 CCGAGATGCTGTCGCTGTCGGCCATCCTCGCGTGAGTCCCTCCCACACACGCGAGCTTCTC 60343255 77357 NM_002055.4(GFAP):c.208C>T (p.Arg70Trp) GFAP Jan 08, 2015 MedGen:C0270726,OMIM:203450,Orphanet:ORPHA58,SNOMED CT:81854007;MedGen:CN517202 Alexander's disease;not provided germline 17 44915279 GCTGGCTTCAAGGAGACCCGGGCCAGTGAGCGGGCAGAGATGATGGAGCTCAATGACCGCT 121909227 22866 NM_000314.6(PTEN):c.640C>T (p.Gln214Ter) PTEN Jan 03, 2017 MedGen:C0265326,OMIM:153480,Orphanet:ORPHA109;MedGen:C0027672,SNOMED CT:699346009;MedGen:C1854416,OMIM:605309,Orphanet:ORPHA210548 Bannayan-Riley-Ruvalcaba syndrome;Hereditary cancer-predisposing syndrome;Macrocephaly/autism syndrome germline;tested-inconclusive 10 87957858 TACTGGTATGTATTTAACCATGCAGATCCTCAGTTTGTGGTCTGCCAGCTAAAGGTGAAGA 878854485 238783 NM_002354.2(EPCAM):c.133C>T (p.Gln45Ter) EPCAM Feb 01, 2016 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Lynch syndrome germline 2 47373519 GCCGTAAACTGCTTTGTGAATAATAATCGTCAATGCCAGTGTACTTCAGTTGGTGCACAAA 755310507 259634 NM_000702.3(ATP1A2):c.2500C>T (p.Arg834Ter) ATP1A2 Aug 11, 2016 MedGen:CN517202 not provided germline 1 160136307 GCTGAGAGTGATATCATGAAGCGGCAGCCACGAAACTCCCAGACGGACAAGCTGGTGAATG 72554620 21139 NM_004820.4(CYP7B1):c.1162C>T (p.Arg388Ter) CYP7B1 Feb 15, 2017 MedGen:C3151147,OMIM:613812,Orphanet:ORPHA79302;MedGen:C1849115,OMIM:270800,Orphanet:ORPHA100986 Bile acid synthesis defect, congenital, 3;Spastic paraplegia 5A not provided 8 64604753 CTCAGTTCAGAGACCGGGGACTACTGTGTGCGAAAGGGAGACTTGGTAGCCATCTTTCCTC 28931610 31880 NM_004415.3(DSP):c.7096C>T (p.Arg2366Cys) DSP Feb 01, 2002 MedGen:C1843292,OMIM:607655,Orphanet:ORPHA293165 Skin fragility woolly hair syndrome germline 6 7584358 AAGGAACTCATCGAAAAGGGCCACGGTATTCGCTTATTAGAAGCACAGATCGCAACCGGGG 886041830 247753 NM_001429.3(EP300):c.3163C>T (p.Arg1055Ter) EP300 Jul 01, 2016 MedGen:C3150941,OMIM:613684,Orphanet:ORPHA353284;MedGen:CN517202 Rubinstein-Taybi syndrome 2;not provided germline;unknown 22 41155015 TTTTTTTAAGTTTTCAAACCAGAAGAACTACGACAGGCACTGATGCCAACTTTGGAGGCAC 121908617 21082 NM_004273.4(CHST3):c.664C>T (p.Arg222Trp) CHST3 Oct 01, 2010 MedGen:C1840471,OMIM:143095 Spondyloepiphyseal dysplasia with congenital joint dislocations germline 10 72007695 GAGGACCACCTGACTCAGTTCATGTTCCGCCGGGGCTCCAGCCGCTCCCTGTGCGAGGACC 1003869920 431574 NM_206933.2(USH2A):c.13576C>T (p.Arg4526Ter) USH2A Jan 01, 2015 Human Phenotype Ontology:HP:0000547,MeSH:D012174,MedGen:C0035334,OMIM:268000,Orphanet:ORPHA791,SNOMED CT:28835009 Retinitis pigmentosa unknown 1 215674335 GGGGGTATTTTGAGTCCTCTTGTCAAAGATCGAACCAGCCCCTCAGCACCCTCAGGGATGG 80338758 26559 NM_005120.2(MED12):c.2881C>T (p.Arg961Trp) MED12 Jan 27, 2016 Human Phenotype Ontology:HP:0001999,MedGen:C0424503;Human Phenotype Ontology:HP:0001274,MedGen:C1837248;Human Phenotype Ontology:HP:0011304,MedGen:C0426891;MedGen:C0220769,OMIM:305450,SNOMED CT:49984004;Human Phenotype Ontology:HP:0001263,MedGen:C4020875;Human Phenotype Ontology:HP:0002023,MedGen:C0003466,OMIM:207500,SNOMED CT:204731006;Human Phenotype Ontology:HP:0001249,MedGen:C1843367 Abnormal facial shape;Agenesis of corpus callosum;Broad thumb;FG syndrome;Global developmental delay;Imperforate anus;Intellectual disability germline;unknown X 71127367 CTGTGTGGCGTCGTGAAGCATGGGATGAACCGGTCCGATGGCTCCTCTGCAGAGCGCTGTA 886041876 265043 NM_031407.6(HUWE1):c.9208C>T (p.Arg3070Cys) HUWE1 Jan 18, 2017 MedGen:C2678046,OMIM:300706,Orphanet:ORPHA85328;MedGen:CN517202 Mental retardation, X-linked, syndromic, turner type;not provided de novo;germline X 53551078 ACCTTCATCCAGACTCTGCCCTCAGACCTGCGCCGTAGTGTCCTAGAGGATATGGAGGACA 587777854 166310 NM_006702.4(PNPLA6):c.3295C>T (p.Arg1099Cys) PNPLA6 Oct 01, 2014 MedGen:C1859093,OMIM:215470,Orphanet:ORPHA1180 Boucher Neuhauser syndrome germline 19 7558861 GACCCCCCTGGCCCCACAGCGGACATCGCCCGCAGCATGGGTGCCAAAACGGTCATCGCCA 199473538 78298 NM_000238.3(KCNH2):c.2467C>T (p.Arg823Trp) KCNH2 Dec 25, 2015 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MeSH:D008133,MedGen:C0023976,SNOMED CT:9651007 Congenital long QT syndrome;Long QT syndrome germline 7 150948981 GCAAGGCCTGGCAAGTCGAACGGGGATGTGCGGGCCCTCACCTACTGTGACCTACACAAGA 121918212 16105 NM_018122.4(DARS2):c.1837C>T (p.Leu613Phe) DARS2 Apr 01, 2007 MedGen:C1970180,OMIM:611105,Orphanet:ORPHA137898 Leukoencephalopathy with Brainstem and Spinal Cord Involvement and Lactate Elevation germline 1 173857604 GCCTTCCCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAGATTCTGTCCCTC 267606673 26833 NM_000052.6(ATP7A):c.2981C>T (p.Thr994Ile) ATP7A Mar 12, 2010 MedGen:C1845359,OMIM:300489,Orphanet:ORPHA139557 Distal spinal muscular atrophy, X-linked 3 germline X 78029314 TAATACGATTTGCTTTCCAAGCCTCTATCACAGTTCTGTGTATTGCATGTCCCTGTTCACT 104895081 17583 NM_000243.2(MEFV):c.800C>T (p.Thr267Ile) MEFV Feb 10, 2016 MedGen:C0031069,OMIM:249100,Orphanet:ORPHA342,SNOMED CT:12579009 Familial Mediterranean fever germline 16 3254268 CAGAAATTCTCCTGACTCTAGAGGAAAAGACAGCTGCGAATCTGGACTCGGCAACAGAACC 587780071 133274 NM_000546.5(TP53):c.580C>T (p.Leu194Phe) TP53 May 31, 2016 Human Phenotype Ontology:HP:0030078,MeSH:C538231,MedGen:C0152013;MeSH:D015179,MedGen:CN236642;Human Phenotype Ontology:HP:0100843,MeSH:D005909,MedGen:C0017636,SNOMED CT:63634009;MedGen:C2239176,OMIM:114550,Orphanet:ORPHA88673,SNOMED CT:187769009,SNOMED CT:25370001;Human Phenotype Ontology:HP:0030692,MeSH:D001932,MedGen:C0006118,SNOMED CT:126952004;Human Phenotype Ontology:HP:0100013,MeSH:D001943,MedGen:C1458155,Orphanet:ORPHA180250,SNOMED CT:126926005;MedGen:C0279663;Human Phenotype Ontology:HP:0006725,MedGen:C0281361;MeSH:C535575,MedGen:C1168401,OMIM:275355,Orphanet:ORPHA67037;Human Phenotype Ontology:HP:0006740,MedGen:C0279680;MeSH:D002583,MedGen:CN236667;MedGen:CN517202 Adenocarcinoma of lung;Colorectal Neoplasms;Glioblastoma;Hepatocellular carcinoma;Neoplasm of brain;Neoplasm of the breast;Ovarian Serous Cystadenocarcinoma;Pancreatic adenocarcinoma;Squamous cell carcinoma of the head and neck;Transitional cell carcinoma of the bladder;Uterine cervical neoplasms;not provided germline;somatic 17 7674951 TTGCTCTTAGGTCTGGCCCCTCCTCAGCATCTTATCCGAGTGGAAGGAAATTTGCGTGTGG -1 473413 NM_000249.3(MLH1):c.589C>T (p.Gln197Ter) MLH1 Jan 30, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 3 37012011 TCCTTGTGTCTTCTGCTGTTTGTTTATCAGCAAGGAGAGACAGTAGCTGATGTTAGGACAC 116840819 33934 NM_000166.5(GJB1):c.223C>T (p.Arg75Trp) GJB1 May 10, 2016 MedGen:C0393808,OMIM:302800,Orphanet:ORPHA101075,SNOMED CT:230552007;MedGen:CN517202 X-linked hereditary motor and sensory neuropathy;not provided germline X 71223930 TATGACCAATTCTTCCCCATCTCCCATGTGCGGCTGTGGTCCCTGCAGCTCATCCTAGTTT 80358232 20718 NM_001169109.1(SCO2):c.674C>T (p.Ser225Phe) SCO2 Nov 01, 1999 MedGen:C1858424,OMIM:604377,Orphanet:ORPHA1561 Cardioencephalomyopathy, fatal infantile, due to cytochrome c oxidase deficiency germline 22 50523738 ATGAGGACCAGGACTACATCGTGGACCACTCCATTGCCATCTACCTGCTCAACCCTGACGG 746165168 239824 NM_004168.3(SDHA):c.1054C>T (p.Arg352Ter) SDHA Oct 24, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1855008,OMIM:252011,Orphanet:ORPHA3208;MedGen:C3279992,OMIM:614165 Hereditary cancer-predisposing syndrome;Mitochondrial complex II deficiency;Paragangliomas 5 germline 5 233635 GTGGTGTCTCGGTCCATGACTCTGGAGATCCGAGAAGGAAGGTGCGTGTGATTTACCACCA 369517993 76482 NM_000187.3(HGD):c.140C>T (p.Ser47Leu) HGD Aug 22, 2013 MedGen:C0002066,OMIM:203500,Orphanet:ORPHA56 Alkaptonuria not provided 3 120674937 ACAATCTCTATGCTGAGCAGCTCTCAGGATCGGCTTTCACTTGTCCACGGAGCACCAATAA 281875188 38971 NM_003070.4(SMARCA2):c.2648C>T (p.Pro883Leu) SMARCA2 Feb 26, 2012 MedGen:C1303073,OMIM:601358,Orphanet:ORPHA3051,SNOMED CT:401046009;MedGen:CN517202 Nicolaides-Baraitser syndrome;not provided germline 9 2086950 CCCCCAGAAGGATCCTCTTGACTGGGACCCCGCTGCAGAATAAGCTCCCTGAACTCTGGGC 201780665 452209 NM_181426.1(CCDC39):c.1795C>T (p.Arg599Ter) CCDC39 Jun 03, 2017 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244 Ciliary dyskinesia germline 3 180642072 AAACAGCAATTATACACAGCAATGGAAGAGCGAACTGAAGAAATCAAGGTTCATAAAACAA -1 444735 NM_001197104.1(KMT2A):c.10171C>T (p.Gln3391Ter) KMT2A Jul 25, 2017 MedGen:CN517202 not provided germline 11 118506063 ATAAGCAATCTTTTAATCAAAGCTAGCCAGCAGAGCCTGGGGATTCAGGACCAGCCTGTGG 104886241 35984 NM_000495.4(COL4A5):c.3538C>T (p.Gln1180Ter) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108666579 GGTCAAGATGGTATTCCTGGACCAGCTGGACAGAAGGGTGAACCAGGTGCTGTAGTTTTTC 374621913 358524 NM_000199.3(SGSH):c.697C>T (p.Arg233Ter) SGSH Jul 17, 2017 MedGen:C0086647,OMIM:252900,Orphanet:ORPHA79269,SNOMED CT:41572006;MedGen:C0026706,SNOMED CT:88393000 Mucopolysaccharidosis, MPS-III-A;Sanfilippo syndrome germline;unknown 17 80213852 CCTTACTTCGTCCCCAACACCCCGGCAGCCCGAGCCGACCTGGCCGCTCAGTACACCACCG 119480072 19950 NM_145693.3(LPIN1):c.1162C>T (p.Arg388Ter) LPIN1 Oct 01, 2008 MedGen:C1849386,OMIM:268200 Myoglobinuria, acute recurrent, autosomal recessive germline 2 11783834 TGACTTGAGCCATTTGCCGTTTTAGATAAACGAAGCCGACATCTTGGTGCTGACGGCGTCT 1060500716 404124 NM_001456.3(FLNA):c.3668C>T (p.Pro1223Leu) FLNA Jun 29, 2017 MedGen:C0265293,OMIM:305620,Orphanet:ORPHA1826,SNOMED CT:62803002;MedGen:C0025237,OMIM:309350,Orphanet:ORPHA2484,SNOMED CT:13449007;MedGen:C1844696,OMIM:304120,Orphanet:ORPHA90652,SNOMED CT:42432003;MedGen:C1848213,OMIM:300049,OMIM:300537,SNOMED CT:448227009 Frontometaphyseal dysplasia;Melnick-Needles syndrome;Oto-palato-digital syndrome, type II;Periventricular nodular heterotopia 1 germline X 154360127 GTGATGGCACGCACACCATTACCTACATTCCCCTCTGCCCCGGGGCCTACACCGTCACCAT 776529713 474964 NM_000136.2(FANCC):c.946C>T (p.Gln316Ter) FANCC Aug 08, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 9 95125136 GATGGGGCCCTGGAAATCATAGCCACTATTCAGGTGTTTACGCAGTGCTTTGTAGAAGCTC -1 432083 NM_014112.4(TRPS1):c.1105C>T (p.Gln369Ter) TRPS1 Jan 24, 2017 MedGen:C0432233,OMIM:190350,SNOMED CT:254091006 Trichorhinophalangeal dysplasia type I germline 8 115604864 TCATCCACCGAATTAGAACAACATTTTCTTCAGACTCACCCAAACAAAATAAAAGCTTCTC 193922803 136930 NM_000540.2(RYR1):c.7063C>T (p.Arg2355Trp) RYR1 Nov 15, 2017 Human Phenotype Ontology:HP:0003789,MedGen:C1850674,OMIM:255320,Orphanet:ORPHA98905;MedGen:CN517202 Minicore myopathy;not provided germline;paternal;unknown 19 38499670 AGCGTGGAGGAGAACGCCAATGTGGTGGTGCGGCTGCTCATCCGGAAGCCTGAGTGCTTCG 121907916 18505 NM_000280.4(PAX6):c.607C>T (p.Arg203Ter) PAX6 Feb 07, 2018 MedGen:C0344542,OMIM:106210;MedGen:C0344542,OMIM:106210;Human Phenotype Ontology:HP:0000659,MedGen:C0344559,OMIM:604229,SNOMED CT:204153003 Aniridia 1;Aniridia 1;Irido-corneo-trabecular dysgenesis de novo;germline;maternal;unknown 11 31794705 AACGGAGAAGATTCAGATGAGGCTCAAATGCGACTTCAGCTGAAGCGGAAGCTGCAAAGAA 267606700 15322 NM_001159772.1(CANT1):c.896C>T (p.Pro299Leu) CANT1 Nov 01, 2009 MedGen:C4012146,OMIM:251450 Desbuquois dysplasia 1 germline 17 78993860 GTGACACGCTGCAGCGCTGGTTCTTCCTGCCGCGCCGCGCCAGCCAGGAGCGCTACAGCGA 137852609 24497 NM_000211.4(ITGB2):c.1777C>T (p.Arg593Cys) ITGB2 Mar 01, 1990 MedGen:C0272187 Leukocyte adhesion deficiency germline 21 44889376 CTGAACCCGCGGCGTGTTGAGTGTAGTGGTCGTGGCCGGTGCCGCTGCAACGTATGCGAGT 371387815 183051 NM_000314.6(PTEN):c.892C>T (p.Gln298Ter) PTEN Jun 09, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline 10 87960984 GAAAAAGTAGAAAATGGAAGTCTATGTGATCAAGAAATCGATAGCATTTGCAGTATAGAGC 267606866 15122 NM_021828.4(HPSE2):c.1516C>T (p.Arg506Ter) HPSE2 Aug 22, 2013 MedGen:C0403555,OMIM:236730,SNOMED CT:236533008 Ochoa syndrome germline 10 98482733 TCCATTACACTTTTTATCATCAACTTGCATCGATCAAGAAAGAAAATCAAGCTGGCTGGGA 137852966 19594 NM_153638.3(PANK2):c.832C>T (p.Arg278Cys) PANK2 Aug 01, 2001 MedGen:C2751506 Neurodegeneration with brain iron accumulation 1, atypical germline 20 3908129 CTCGAGCTGAAGGACCTGACTCTGTGTGGACGCAAAGGCAATCTGCACTTTATACGCTTTC 80338721 34360 NM_014251.2(SLC25A13):c.1078C>T (p.Arg360Ter) SLC25A13 Jan 05, 2012 MedGen:C1853942,OMIM:605814,Orphanet:ORPHA247598 Neonatal intrahepatic cholestasis caused by citrin deficiency not provided 7 96184376 GATCTTGTAAAAACTCGAATGCAGAACCAACGATCAACTGGCTCTTTTGTGGGAGAACTCA 199469707 40137 NM_001044385.2(TMEM237):c.52C>T (p.Arg18Ter) TMEM237 Oct 05, 2012 Human Phenotype Ontology:HP:0002335,MedGen:C0431399,Orphanet:ORPHA475,SNOMED CT:253175003,SNOMED CT:716997004;MedGen:C3280766,OMIM:614424 Joubert syndrome;Joubert syndrome 14 germline 2 201640915 AATTTATTTTTTCCGCCACAGCGTCCTCCACGAGCTCTTCCACCTGTGCCAAGGTAAAAAT 201363394 480576 NM_000062.2(SERPING1):c.1198C>T (p.Arg400Cys) SERPING1 Jan 10, 2018 MedGen:C2717906,OMIM:106100,SNOMED CT:234619000 Hereditary angioedema type 1 germline 11 57611885 AAGTTCCAGCCCACTCTCCTAACACTACCCCGCATCAAAGTGACGACCAGCCAGGATATGC 149105551 404915 NM_002016.1(FLG):c.5392C>T (p.Arg1798Ter) FLG Feb 23, 2017 MedGen:CN517202 not provided germline 1 152309494 GGAAGACAAAGATCCCGCCACGAGCAGGCACGAGACAGCTCCAGGCACTCAGCGTCCCAAG 755806668 473713 NM_000038.5(APC):c.2656C>T (p.Gln886Ter) APC Jun 24, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 5 112838250 CGAGGTTTGCAGATCTCCACCACTGCAGCCCAGATTGCCAAAGTCATGGAAGAAGTGTCAG 397517889 57195 NM_170707.3(LMNA):c.1129C>T (p.Arg377Cys) LMNA Jun 28, 2017 MedGen:CN043576;EFO:EFO_0000407,Human Phenotype Ontology:HP:0001644,MedGen:C0007193,Orphanet:ORPHA217604,SNOMED CT:195021004;MedGen:CN517202 Charcot-Marie-Tooth disease, type 2;Primary dilated cardiomyopathy;not provided germline 1 156136093 CTGGCCCTGGACATGGAGATCCACGCCTACCGCAAGCTCTTGGAGGGCGAGGAGGAGAGGT 587777036 76337 NM_004426.2(PHC1):c.2974C>T (p.Leu992Phe) PHC1 Dec 01, 2014 Human Phenotype Ontology:HP:0001249,MedGen:C1843367;MedGen:C3809431,OMIM:615414;MedGen:C0431350 Intellectual disability;Primary autosomal recessive microcephaly 11;Primary microcephaly germline 12 8939418 AGTGCCATGAACATCAAGCTGGGCCCTGCCCTCAAGATCTGCGCCAAGATAAATGTCCTCA 104893850 29920 NM_002448.3(MSX1):c.577C>T (p.Gln193Ter) MSX1 Aug 01, 2004 MedGen:C3489529,OMIM:106600 Selective tooth agenesis 1 germline 4 4862808 CAGCTGCTGGCGCTGGAGCGCAAGTTCCGCCAGAAGCAGTACCTGTCCATCGCCGAGCGCG 587779467 106905 NM_000090.3(COL3A1):c.3847C>T (p.Gln1283Ter) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189010201 TATTCAGGAGAATACTGGGTTGACCCTAACCAAGGATGCAAATTGGATGCTATCAAGGTAT 193922955 40422 NM_001165928.3(DAG1):c.575C>T (p.Thr192Met) DAG1 May 13, 2011 MedGen:C3151184,OMIM:613818,Orphanet:ORPHA280333;MedGen:CN517202 Limb-girdle muscular dystrophy-dystroglycanopathy, type C9;not provided germline;unknown 3 49531086 GTGCTGCGGATGAACCTGTGACTGTTTTGACGGTGATTTTGGATGCCGACCTCACCAAGAT 587779380 97521 NM_001166419.1(HDAC8):c.356C>T (p.Thr119Met) HDAC8 Dec 02, 2014 MedGen:C3550903,OMIM:300882 Cornelia de Lange syndrome 5 de novo;germline X 72567970 TTGACTATGCAGCAGCTATAGGAGGGGCTACGATCACAGCTGCCCAATGCCTGATTGACGG 111426349 27565 NM_004612.3(TGFBR1):c.1459C>T (p.Arg487Trp) TGFBR1 Sep 30, 2016 MedGen:C2697932,Orphanet:ORPHA60030,SNOMED CT:446263001;MedGen:C2697933,OMIM:609192;MedGen:CN118826,Orphanet:ORPHA91387;MedGen:CN517202 Loeys-Dietz syndrome;Loeys-Dietz syndrome 1;Thoracic aortic aneurysm and aortic dissection;not provided germline 9 99149252 GCCAATGGAGCAGCTAGGCTTACAGCATTGCGGATTAAGAAAACATTATCGCAACTCAGTC 375422404 264191 NM_000128.3(F11):c.1489C>T (p.Arg497Ter) F11 Apr 26, 2016 MedGen:CN517202 not provided germline 4 186286423 AACCACGATTTTTTAAATTTAGATTCTCAACGACCCATATGCCTGCCTTCCAAAGGAGATA 199474789 39949 NM_000267.3(NF1):c.4168C>T (p.Leu1390Phe) NF1 Jun 30, 2017 MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003;MedGen:C2931482,OMIM:601321,Orphanet:ORPHA638;MedGen:CN517202 Neurofibromatosis, type 1;Neurofibromatosis-Noonan syndrome;not provided germline 17 31258401 AGCATCGGTGCAGTAGGAAGTGCCATGTTCCTCAGATTTATCAATCCTGCCATTGTCTCAC -1 488156 NM_006772.2(SYNGAP1):c.739C>T (p.Gln247Ter) SYNGAP1 Dec 08, 2016 MedGen:C2675473,OMIM:612621 Mental retardation, autosomal dominant 5 de novo 6 33435590 GCCGAAAGAGACAAATGGATTGAGAATCTGCAGCGGGCAGTAAAGCCCAACAAGGTATTGG 1060501880 402169 NM_000135.2(FANCA):c.2749C>T (p.Arg917Ter) FANCA Sep 28, 2016 MedGen:C0015625,Orphanet:ORPHA84,SNOMED CT:30575002 Fanconi anemia germline 16 89764919 GCCCTCTCTCTCTGGACACACAGAACCTTCCGAGAGGTGTTGAAAGAGGAAGATGTTCACG 863225454 214848 NM_016218.3(POLK):c.410C>T (p.Ser137Phe) POLK Jul 08, 2013 Human Phenotype Ontology:HP:0012125,MedGen:C0376358,OMIM:176807,SNOMED CT:399068003 Malignant tumor of prostate somatic 5 75573739 TTTTTTCCATGTGGTCAATTTTCTTTCAGTCTACTTCAAATTACCATGCAAGGAGATTTGG 28937568 22519 NM_001540.4(HSPB1):c.452C>T (p.Thr151Ile) HSPB1 Jun 01, 2004 MedGen:C2608087,OMIM:608634 Distal hereditary motor neuronopathy type 2B germline 7 76304007 CGTCCAGGCTGCCCCCCGGTGTGGACCCCACCCAAGTTTCCTCCTCCCTGTCCCCTGAGGG 747900131 454630 NM_001369.2(DNAH5):c.1432C>T (p.Arg478Ter) DNAH5 Apr 19, 2017 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244 Ciliary dyskinesia germline 5 13913847 TATATTTTTGGAAAATTCGAAACTTTTCACCGACGCCTTGCCAAGATAATAGACATCTTTA 200826424 247426 NM_018191.3(RCBTB1):c.973C>T (p.His325Tyr) RCBTB1 Nov 01, 2016 na;Human Phenotype Ontology:HP:0000547,MeSH:D012174,MedGen:C0035334,OMIM:268000,Orphanet:ORPHA791,SNOMED CT:28835009 RETINAL DYSTROPHY WITH EXTRAOCULAR ANOMALIES;Retinitis pigmentosa germline 13 49549530 GGTCAGTCCGTGATCCTCCCGCACCTCACCCACTTCTCCTGCACCGACGACGTGTTTGCCT 587784339 169779 NM_003560.3(PLA2G6):c.1903C>T (p.Arg635Ter) PLA2G6 Mar 30, 2017 Human Phenotype Ontology:HP:0012675,MedGen:C4021076;MedGen:CN517202 Iron accumulation in brain;not provided germline 22 38115658 CCCCTAGACCAGCTGGTGTGGCGGGCGGCCCGAAGCAGCGGGGCAGCTCCTACTTACTTCC 142947311 474222 NM_005732.3(RAD50):c.2014C>T (p.Gln672Ter) RAD50 Apr 21, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 5 132595617 GCCACAGCAGTTTACTCCCAGTTCATTACTCAGCTAACAGACGAAAACCAGTCATGTTGCC 104894657 18300 NM_000529.2(MC2R):c.382C>T (p.Arg128Cys) MC2R Jul 01, 1994 MedGen:C4049650,OMIM:202200 ACTH resistance germline 18 13885137 ATCTTCAGCCTGTCTGTGATTGCTGCGGACCGCTACATCACCATCTTCCACGCACTGCGGT 80357211 70429 NM_007294.3(BRCA1):c.949C>T (p.Gln317Ter) BRCA1 Sep 08, 2016 MedGen:C2676676,OMIM:604370 Breast-ovarian cancer, familial 1 germline 17 43094582 AAAAGCAAACAGCCTGGCTTAGCAAGGAGCCAACATAACAGATGGGCTGGAAGTAAGGAAA 137853591 28669 NM_000294.2(PHKG2):c.433C>T (p.His145Tyr) PHKG2 May 01, 2000 MedGen:C2751643,OMIM:613027,Orphanet:ORPHA264580 Glycogen storage disease IXc germline 16 30753434 CGGTCTCTGCTGGAAGCAGTGAGCTTTCTCCATGCCAACAACATTGTGCATCGAGATCTGA 104893901 24044 NM_004387.3(NKX2-5):c.508C>T (p.Gln170Ter) NKX2-5 Nov 10, 2016 MedGen:C1862388,OMIM:108900 Atrial septal defect 7 with or without atrioventricular conduction defects germline 5 173233036 CAGCGGTACCTGTCGGCCCCCGAACGCGACCAGCTGGCCAGCGTGCTGAAACTCACGTCCA 121918624 27928 NM_006920.5(SCN1A):c.664C>T (p.Arg222Ter) SCN1A Jan 01, 2018 MedGen:C1858673,OMIM:604403;MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002;MedGen:CN517202 Generalized epilepsy with febrile seizures plus, type 2;Severe myoclonic epilepsy in infancy;not provided de novo;germline;unknown 2 166052882 GTCTCGGCATTGAGAACATTCAGAGTTCTCCGAGCATTGAAGACGATTTCAGTCATTCCAG 1057518644 361294 NM_152419.2(HGSNAT):c.1360C>T (p.Gln454Ter) HGSNAT Mar 01, 2016 MedGen:C0086649,OMIM:252930,Orphanet:ORPHA79271,SNOMED CT:75238000 Mucopolysaccharidosis, MPS-III-C inherited 8 43192413 CGCCTGCTGCTGGGAGACGATCACCTTTACCAGCACCCATCTTCTGCTGTGAGTGAGACTC 886043155 269850 NM_001305581.1(LRMDA):c.256C>T (p.Arg86Ter) LRMDA Jan 21, 2016 MedGen:C3808786,OMIM:615179 Albinism, oculocutaneous, type VII germline 10 76036132 AGACTGCATACCTTAACCCTCAACAAGAACCGAATATCCTTTCCTCTGCCCGCTGCCCCCA 764409952 484230 NM_000051.3(ATM):c.2734C>T (p.Gln912Ter) ATM Oct 02, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 11 108268505 AAGTTCTTGTGTTTGTGTGTAACTACTGCTCAGACCAATACTGTGTCCTTTAGGGCAGCTG 794727198 191971 NM_000182.4(HADHA):c.1918C>T (p.Gln640Ter) HADHA Nov 24, 2014 MedGen:CN074230,OMIM:609016;MedGen:C0342786,OMIM:609015,SNOMED CT:237999008 Long-chain 3-hydroxyacyl-CoA dehydrogenase deficiency;Mitochondrial trifunctional protein deficiency germline 2 26192392 CGTAAATCTGGGAAGGGCTTTTACATCTATCAGGAGGGTGTGAAGAGGAAGGATTTGAATT 727502769 172189 NM_005360.4(MAF):c.173C>T (p.Thr58Ile) MAF Apr 01, 2016 MedGen:C1832812,OMIM:601088,Orphanet:ORPHA477668;MedGen:CN517202 Ayme-gripp syndrome;not provided germline 16 79599730 GTCTCATCGCCGGGGGCTCGCTGTCCTCCACCCCCATGAGCACGCCGTGCAGCTCGGTGCC 1131691668 422219 NM_030632.2(ASXL3):c.3106C>T (p.Arg1036Ter) ASXL3 Sep 29, 2017 MedGen:C3809650,OMIM:615485,Orphanet:ORPHA352577;MedGen:CN517202 Bainbridge-Ropers syndrome;not provided de novo;germline 18 33742954 AAGAGCCAACCAGTCTCCAAACCTGAGTCTCGAGCATCCACTAGCACATCTGTCAGTGGCG 786205748 188554 NM_000719.6(CACNA1C):c.1552C>T (p.Arg518Cys) CACNA1C Jul 12, 2017 MeSH:D008133,MedGen:C0023976,SNOMED CT:9651007;MedGen:CN517202 Long QT syndrome;not provided germline 12 2566465 CGGTGGAATCGGTTCTGCAGAAGGAAGTGCCGCGCCGCAGTCAAGTCTAATGTCTTCTACT 398123418 99035 NM_000487.5(ARSA):c.986C>T (p.Thr329Ile) ARSA Nov 26, 2012 MedGen:C0023522,OMIM:250100,Orphanet:ORPHA512,SNOMED CT:396338004 Metachromatic leukodystrophy germline 22 50626057 GACTGACCAGCCTCCTGCCCCCAGGCGTGACCCACGAGCTGGCCAGCTCCCTGGACCTGCT 587777673 153829 NM_005876.4(SPEG):c.4276C>T (p.Arg1426Ter) SPEG Aug 07, 2014 MedGen:C4014814,OMIM:615959 Myopathy, centronuclear, 5 germline 2 219473732 TGACCTCCCTGTCATGTGTCCCCTAGCTGCCGAGGGGCCCTCCTAGAGGCACGGGCCGGTG 777483913 269707 NM_000070.2(CAPN3):c.1309C>T (p.Arg437Cys) CAPN3 Apr 18, 2017 MedGen:C1869123,OMIM:253600,Orphanet:ORPHA267 Limb-girdle muscular dystrophy, type 2A germline 15 42399607 CAGACCTGGACAGTGTCTGTGAACGAGGGCCGCTGGGTACGGGGTTGCTCTGCCGGAGGCT 72558455 103233 NM_000531.5(OTC):c.835C>T (p.Gln279Ter) OTC - MedGen:CN517202 not provided unknown X 38408993 GGACAAGAAGAGGAGAAGAAAAAGCGGCTCCAGGCTTTCCAAGGTTACCAGGTTACAATGA 63751180 104069 NM_002087.3(GRN):c.1252C>T (p.Arg418Ter) GRN Aug 07, 2015 MedGen:CN517202 not provided germline 17 44352087 TACACGTGTGTAGCTGAGGGGCAGTGTCAGCGAGGAAGCGAGATCGTGGCTGGACTGGAGA 768825050 205036 NM_022406.3(XRCC4):c.673C>T (p.Arg225Ter) XRCC4 Jul 23, 2015 MedGen:C4225288,OMIM:616541 Short stature, microcephaly, and endocrine dysfunction germline 5 83204849 ACTGCAATCTGTTCTGAAATGACTGCTGACCGAGATCCAGTCTATGATGAGAGTACTGATG -1 477752 NM_004360.4(CDH1):c.529C>T (p.Gln177Ter) CDH1 Mar 14, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 16 68808565 GAAAAAGGCCCATTTCCTAAAAACCTGGTTCAGGTAGAGAAAGAAGTTCTCTGTTTCTCTG 768134055 367160 NM_053025.3(MYLK):c.2119C>T (p.Gln707Ter) MYLK Mar 21, 2015 MedGen:CN517202 not provided germline 3 123708719 GCCTGGAACAGCGCTGGAGAGGTCCGCACCCAGGCCGTGCTCACGGTACAAGGTGAGGCTG 587777387 136552 NM_001615.3(ACTG2):c.769C>T (p.Arg257Cys) ACTG2 Nov 04, 2016 MedGen:C0238062,Orphanet:ORPHA2978;MeSH:D030342,MedGen:C0950123;Human Phenotype Ontology:HP:0000021,MedGen:C1855311;MedGen:C1835084,OMIM:155310,Orphanet:ORPHA2241;MedGen:CN517202 Chronic intestinal pseudoobstruction;Inborn genetic diseases;Megacystis;Visceral myopathy;not provided de novo;germline;maternal 2 73914835 CAGGTTATCACCATTGGCAATGAGCGCTTCCGCTGCCCTGAGACCCTCTTCCAGCCTTCCT 145665129 16118 NM_015272.4(RPGRIP1L):c.2413C>T (p.Arg805Ter) RPGRIP1L Feb 23, 2015 MedGen:C1857662,OMIM:216360,Orphanet:ORPHA1454;MedGen:C1969053,OMIM:611560 COACH syndrome;Joubert syndrome 7 germline;unknown 16 53645895 ACAATAAGATGTTGCAACCACCTGCAGTCCCGAGCAAGCCACCTGCAGCCACACCCATATG -1 431883 NM_000382.2(ALDH3A2):c.103C>T (p.Gln35Ter) ALDH3A2 Jun 01, 2017 MedGen:C0037231,OMIM:270200,Orphanet:ORPHA816,SNOMED CT:111303009 Sjögren-Larsson syndrome germline 17 19649074 CAGCAGCTGGAGGCCCTGCGGAGGATGGTGCAGGAGCGCGAGAAGGATATCCTGACGGCCA 387907077 39942 NM_015338.5(ASXL1):c.2773C>T (p.Gln925Ter) ASXL1 Jun 26, 2011 MedGen:C0796232,OMIM:605039 C-like syndrome germline 20 32435485 TCCAGAGAACACATACCATCTGTTGAGCCCCAGGTTGGAGAGGAGTGGGAGAAAGCTGCTC 267608241 191328 NM_000287.3(PEX6):c.2440C>T (p.Arg814Ter) PEX6 Apr 13, 2015 MedGen:C3553936,OMIM:614862 Peroxisome biogenesis disorder 4a (zellweger) germline 6 42965712 GAACTGGACTCTTTGGCCCCAAGCCGGGGGCGAAGTGGAGATTCTGGAGGAGTGATGGACA 869312746 226221 NM_014625.3(NPHS2):c.115C>T (p.Gln39Ter) NPHS2 Jan 01, 2016 MedGen:C1868672,OMIM:600995,Orphanet:ORPHA656 Nephrotic syndrome, idiopathic, steroid-resistant unknown 1 179575750 GCCGAGAGGAGCGGCGGAGGCCGCGGGCGCCAGGAGGCTGGGCCCGAGCCGTCGGGCTCCG 762909359 196419 NM_004946.2(DOCK2):c.3970C>T (p.Gln1324Ter) DOCK2 Jun 18, 2015 MedGen:C4225328,OMIM:616433,Orphanet:ORPHA447737 Immunodeficiency 40 germline 5 170047513 GCAACAAACCTTGTTTTCTTCCTTTAGATCCAGCAGGCAAAATTCTATGAAAGCATCATGA 727503776 178386 NM_006306.3(SMC1A):c.121C>T (p.Leu41Phe) SMC1A Dec 02, 2014 MedGen:C1854630,OMIM:605130,Orphanet:ORPHA319182 Wiedemann-Steiner syndrome maternal X 53415158 CTCGTCCCTCTTCCCTTAGGTAAGTCAAATCTCATGGATGCCATCAGCTTTGTGCTAGGTG 121917889 26710 NM_005333.4(HCCS):c.649C>T (p.Arg217Cys) HCCS Aug 18, 2011 MedGen:C0796070,OMIM:309801 Linear skin defects with multiple congenital anomalies 1 germline X 11121652 CCTTTTGATAGGCACGATTGGATCATAAACCGTTGCGGGACAGAAGTTAGATATGTGATTG 886042091 265300 NM_003494.3(DYSF):c.3478C>T (p.Gln1160Ter) DYSF Sep 28, 2016 MedGen:C1850889,OMIM:253601,Orphanet:ORPHA268;MedGen:C1850808,OMIM:254130,Orphanet:ORPHA45448;MedGen:CN517202 Limb-girdle muscular dystrophy, type 2B;Miyoshi muscular dystrophy 1;not provided germline 2 71590246 AACCGCTACCATCTACGCTGCTACATGTACCAGGCCCGGGACCTGGCTGCGATGGACAAGG 137852920 18440 NM_015102.4(NPHP4):c.2044C>T (p.Arg682Ter) NPHP4 Dec 01, 2014 MedGen:CN228268;Human Phenotype Ontology:HP:0000789,MedGen:C0021359;MedGen:C1847013,OMIM:606966 Cerebello-oculo-renal syndrome (nephronophthisis, oculomotor apraxia and cerebellar abnormalities);Infertility;Nephronophthisis 4 germline 1 5904716 TTCTACCGCTTCCCACCCGCAACGACGCCACGACTGCAGCTGGTCCAGCTGGATGAGGCCG 878854990 238765 NM_014946.3(SPAST):c.1378C>T (p.Arg460Cys) SPAST Oct 09, 2016 MedGen:C1866855,OMIM:182601,Orphanet:ORPHA100985 Spastic paraplegia 4, autosomal dominant germline 2 32136933 AGAAGAGAAGGGGAGCACGATGCTAGTAGACGCCTAAAAACTGAATTTCTAATAGAATTTG 770558150 207022 NM_015120.4(ALMS1):c.6436C>T (p.Arg2146Ter) ALMS1 Sep 10, 2016 MedGen:C0268425,OMIM:203800,Orphanet:ORPHA64,SNOMED CT:63702009;MedGen:C0268425,OMIM:203800,Orphanet:ORPHA64,SNOMED CT:63702009 Alstrom syndrome;Alstrom syndrome germline 2 73452960 CCAACAGCTCTTCCTAGTTCCTTTTCACATCGAGAGAAACCAGATATTTTCTATCAAAAGG 794727607 194226 NM_001844.4(COL2A1):c.2530C>T (p.Gln844Ter) COL2A1 Jan 28, 2015 MedGen:C2020284,OMIM:108300 Stickler syndrome type 1 germline 12 47980649 TCCTCCTTCCCATTATAGGGTGCTGATGGCCAGCCTGGGGCCAAGGGTGAGCAAGGAGAGG 587781576 150922 NM_005732.3(RAD50):c.643C>T (p.Gln215Ter) RAD50 Sep 17, 2013 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 5 132579953 GAATATCAAATGGAACTAAAATATCTGAAGCAATATAAGGAAAAAGCTTGTGAGATTCGTG 587777682 153864 NM_019105.6(TNXB):c.12214C>T (p.Arg4072Cys) TNXB Aug 01, 2013 MedGen:C1848029,OMIM:606408,Orphanet:ORPHA230839 Ehlers-Danlos-like syndrome due to tenascin-X deficiency germline 6 32042353 GTGCCCCCACTTGCTTCCCAGGTGTTCCAGCGCCGCATGGATGGACAGACAGACTTCTGGA 779702016 361745 NM_003245.3(TGM3):c.1351C>T (p.Gln451Ter) TGM3 Jan 05, 2017 MedGen:C4310649,OMIM:617251 Uncombable hair syndrome 2 germline 20 2332019 TCCCACCACACAGGCTCTGACCAGGAAAGACAAGTGTTCCAAAAGGCTTTGGGGAAACTTA 397515753 51450 NM_000138.4(FBN1):c.1051C>T (p.Gln351Ter) FBN1 Sep 13, 2012 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006 Marfan syndrome germline 15 48520755 ACAAACGGGCGCTGCTCTAACCAGCTGCCACAGTCCATAACCAAAATGCAGTGCTGCTGTG 754637179 214306 NM_019892.5(INPP5E):c.944C>T (p.Pro315Leu) INPP5E Feb 23, 2015 Human Phenotype Ontology:HP:0002335,MedGen:C0431399,Orphanet:ORPHA475,SNOMED CT:253175003,SNOMED CT:716997004 Joubert syndrome unknown 9 136434127 CACCACATGCTCCCTCCTTCCAGGAGCTCCCGCCCAGCCTGGACGAGTTCCTGCTCCCAGC 121908968 21992 NM_016239.3(MYO15A):c.3685C>T (p.Gln1229Ter) MYO15A Nov 01, 2001 MedGen:C1838263,OMIM:600316 Deafness, autosomal recessive 3 germline 17 18124558 CACGGGGAGGATGGTGTGGAGGACATGACACAGCTGGAGTGAGTGGGCAGGGCCGGCGGGG 730881121 178951 NM_001001430.2(TNNT2):c.239C>T (p.Pro80Leu) TNNT2 Oct 14, 2014 MedGen:CN517202 not provided germline 1 201365635 TCATGCCCAACTTGGTGCCTCCCAAGATCCCCGATGGAGAGAGAGTGGACTTTGATGTAAG 863224504 212499 NM_001369.2(DNAH5):c.9502C>T (p.Arg3168Ter) DNAH5 Apr 01, 2016 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244 Ciliary dyskinesia germline 5 13770852 GAGAAGTGTGTTGATTATTTTCAGAGATTCCGACGTTCTACCCACGTGACGCCCAAATCAT 62645904 105472 NM_000372.4(TYR):c.832C>T (p.Arg278Ter) TYR Jul 25, 2016 MedGen:C0268494,OMIM:203100,Orphanet:ORPHA79431,SNOMED CT:6483008;MedGen:CN517202 Tyrosinase-negative oculocutaneous albinism;not provided germline 11 89191214 TGAGGGTGTTTTGTACAGATTGTCTGTAGCCGATTGGAGGAGTACAACAGCCATCAGTCTT 587783841 170001 NM_000252.2(MTM1):c.614C>T (p.Pro205Leu) MTM1 Feb 08, 2013 MedGen:C0410203,OMIM:310400,Orphanet:ORPHA596,SNOMED CT:46804001 Severe X-linked myotubular myopathy germline X 150641354 GTGACACTTACCCTGCTCTTTTGGTGGTTCCGTATCGTGCCTCAGATGATGACCTCCGGAG 1135401791 424673 NM_015339.4(ADNP):c.517C>T (p.Arg173Ter) ADNP Jan 06, 2017 MedGen:C4014538,OMIM:615873,Orphanet:ORPHA404448 Helsmoortel-van der aa syndrome de novo 20 50894197 GCTGTTTATTACTGTAAGAAGTGCACTTACCGAGATCCTCTTTATGAAATAGTTAGGAAGC 80358370 105829 NM_133433.3(NIPBL):c.7327C>T (p.Gln2443Ter) NIPBL Feb 08, 2013 MedGen:CN029798,OMIM:122470 Cornelia de Lange syndrome 1 germline 5 37057249 GACAATCTAGCCTGTTTTCCATACCAGACACAGGAAGAGCCGTTGTTTATAATGCATCATA -1 426360 NM_001396.4(DYRK1A):c.601C>T (p.Gln201Ter) DYRK1A May 08, 2017 MedGen:CN517202 not provided germline 21 37486551 AAGAACAAGAAGGCTTTTCTGAATCAAGCACAGATAGAAGTGCGACTTCTTGAGCTCATGA 80358214 31122 NM_002065.6(GLUL):c.970C>T (p.Arg324Cys) GLUL Nov 03, 2005 MedGen:C1864910,OMIM:610015,Orphanet:ORPHA71278 Glutamine deficiency, congenital germline 1 182384557 GCTGGTGTAGCCAATCGTAGCGCCAGCATACGCATTCCCCGGACTGTTGGCCAGGAGAAGA 72551353 27306 NM_000463.2(UGT1A1):c.1124C>T (p.Ser375Phe) UGT1A1 Feb 01, 1994 MedGen:C0010324,OMIM:218800,Orphanet:ORPHA79234 Crigler Najjar syndrome, type 1 germline 2 233768259 TGACCCGTGCCTTTATCACCCATGCTGGTTCCCATGGTGTTTATGAAAGCATATGCAATGG 587777208 107272 NM_001013703.3(EIF2AK4):c.3448C>T (p.Arg1150Ter) EIF2AK4 Feb 01, 2014 MedGen:C0340848,OMIM:234810,SNOMED CT:234161007 Familial pulmonary capillary hemangiomatosis germline 15 40008067 GAACGTGTGTTCAGGCCGCGCAAGTTAGATCGATTTCATCCCAAAGAACTTCTGGAGTGTG 63750006 96059 NM_000251.2(MSH2):c.1255C>T (p.Gln419Ter) MSH2 Sep 05, 2013 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:CN517202 Lynch syndrome;not provided germline;unknown 2 47429920 CAGGGTATAAATCAACTACCTAATGTTATACAGGCTCTGGAAAAACATGAAGGTAACAAGT 527236036 152911 NM_004830.3(MED23):c.3988C>T (p.Arg1330Ter) MED23 - MedGen:C3280265,OMIM:614249 Mental retardation, autosomal recessive 18 inherited 6 131587798 AACTTAAAACCAGCTTTAAAACTTCGTCTTCGATTCATCACACACATTAGCAAGATGGAGC 28931591 32539 NM_000744.6(CHRNA4):c.851C>T (p.Ser284Leu) CHRNA4 Jun 11, 2014 MedGen:C1838049,OMIM:600513;MedGen:CN517202 Epilepsy, nocturnal frontal lobe, type 1;not provided germline 20 63350560 AGATCACGCTGTGCATCTCCGTGCTGCTGTCGCTCACCGTCTTCCTGCTGCTCATCACCGA 797045658 207952 NM_003482.3(KMT2D):c.11845C>T (p.Gln3949Ter) KMT2D Jun 06, 2014 MedGen:CN030661,OMIM:147920 Kabuki syndrome 1 germline 12 49032860 CAGCTTCAACAACAGCAGCAGCAACAGCTTCAACAGCAGCAACAGCAGCTACAACAGCAAC 193922135 44476 NM_000074.2(CD40LG):c.31C>T (p.Arg11Ter) CD40LG Dec 05, 2016 MedGen:C0398689,OMIM:308230,Orphanet:ORPHA101088;MedGen:CN169374 Immunodeficiency with hyper IgM type 1;not specified germline X 136648279 ATGATCGAAACATACAACCAAACTTCTCCCCGATCTGCGGCCACTGGACTGCCCATCAGCA 121434420 21793 NM_004572.3(PKP2):c.235C>T (p.Arg79Ter) PKP2 Sep 15, 2017 MedGen:C0349788,Orphanet:ORPHA247,SNOMED CT:253528005,SNOMED CT:281170005;MedGen:C1836906,OMIM:609040;MedGen:CN230736;MedGen:CN517202 Arrhythmogenic right ventricular cardiomyopathy;Arrhythmogenic right ventricular cardiomyopathy, type 9;Cardiovascular phenotype;not provided germline 12 32879021 AATATTTGCTTGATTGCAGGAAATCTTCACCGAACCAGCAGTGTTCCTGAGTATGTCTACA 1114167559 419629 NM_000038.5(APC):c.2701C>T (p.Gln901Ter) APC Jul 08, 2014 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 5 112838295 ATGGAAGAAGTGTCAGCCATTCATACCTCTCAGGAAGACAGAAGTTCTGGGTCTACCACTG 119471023 19169 NM_022081.5(HPS4):c.649C>T (p.Arg217Ter) HPS4 Oct 11, 2012 MedGen:C3484357,OMIM:614073 Hermansky-Pudlak syndrome 4 germline 22 26468571 CCCTCCCTCACCGCCAAGGTCCTGCTTCACCGAACAGCACCTCAGGAGCAGGTATTGTAAA 587783371 167938 NM_003688.3(CASK):c.880C>T (p.Gln294Ter) CASK Feb 08, 2013 MedGen:C2677903,OMIM:300749,Orphanet:ORPHA163937 Mental retardation and microcephaly with pontine and cerebellar hypoplasia germline X 41636613 TACAAGATTCATCTTCCAGAAACAGTAGAGCAGCTGAGGAAATTCAATGCAAGGAGGAAAC 771809901 211704 NM_005262.2(GFER):c.373C>T (p.Gln125Ter) GFER Sep 26, 2012 MedGen:CN517202 not provided germline 16 1984861 GCCTACTACCCCGACCTGCCCACCCCAGAACAGCAGCAAGACATGGCCCAGTTCATACATT 587777092 102943 NM_052844.3(WDR34):c.1061C>T (p.Thr354Met) WDR34 Feb 10, 2014 MedGen:C3810200,OMIM:615633 Short-rib thoracic dysplasia 11 with or without polydactyly germline 9 128634842 GCTTTGACCCTAGGCTGTTCATTCTGGGCACGGAAGGCGGCTTCCCGCTCAAGTGTTCCCT 62653623 153515 NM_003159.2(CDKL5):c.175C>T (p.Arg59Ter) CDKL5 Mar 13, 2014 MedGen:C2748910,Orphanet:ORPHA3095;MedGen:C1839333,OMIM:300672 Atypical Rett syndrome;Early infantile epileptic encephalopathy 2 de novo;germline;unknown X 18575383 GAAAATGAAGAAGTCAAAGAAACGACTTTACGAGAGCTTAAAATGCTTCGGACTCTCAAGC 281865486 47577 NM_004614.4(TK2):c.133C>T (p.Gln45Ter) TK2 Dec 06, 2012 MedGen:C3149750,OMIM:609560 Mitochondrial DNA depletion syndrome 2 not provided 16 66549001 ACTGATTTCCTTTCTTTTGTAGATAAAGAACAGGAAAAAGAGAAAAAATCAGTGGTAAGTC 62654864 168447 NM_133433.3(NIPBL):c.5482C>T (p.Arg1828Ter) NIPBL Feb 08, 2013 MedGen:CN029798,OMIM:122470 Cornelia de Lange syndrome 1 germline 5 37022298 GGACGATTGATGGATAATTCGACTAGTGTCCGAGAAGCAGCAGTAGAATTACTAGGTCGAT -1 443922 NM_020732.3(ARID1B):c.2362C>T (p.Gln788Ter) ARID1B Jul 26, 2017 MedGen:CN517202 not provided germline 6 157110552 CATCCCGCCTTGAGCCAGTCACCAATGCCACAGGAAAGAGGTTCGTCTCCAGTTCATGTCT 104894464 188074 NM_021728.3(OTX2):c.289C>T (p.Arg97Ter) OTX2 Sep 01, 2013 MedGen:C1864690,OMIM:610125,Orphanet:ORPHA178364 Microphthalmia syndromic 5 germline 14 56802340 TCTTTCCCTTCCAAGGTATGGTTTAAGAATCGAAGAGCTAAGTGCCGCCAACAACAGCAAC 121918206 16098 NM_018122.4(DARS2):c.787C>T (p.Arg263Ter) DARS2 Apr 01, 2007 MedGen:C1970180,OMIM:611105,Orphanet:ORPHA137898 Leukoencephalopathy with Brainstem and Spinal Cord Involvement and Lactate Elevation germline 1 173838206 TTTCTCAATTGTAGATATTTTCAGGTTGCCCGATGTTATCGAGATGAAGGTTCAAGACCAG 201361100 195172 NM_004006.2(DMD):c.8656C>T (p.Gln2886Ter) DMD Apr 07, 2017 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009;MedGen:C3668940,OMIM:302045;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Becker muscular dystrophy;Dilated cardiomyopathy 3B;Duchenne muscular dystrophy germline X 31478995 CAGCCTTTGGAAGGACTAGAGAAACTCTACCAGGAGCCCAGAGGTAATTGAATGTGGAACT 587782087 452431 NM_000249.3(MLH1):c.979C>T (p.Gln327Ter) MLH1 Jun 05, 2017 MedGen:C0009405,Orphanet:ORPHA443090 Hereditary nonpolyposis colon cancer germline 3 37020404 CTGCACGAGGAGAGCATCCTGGAGCGGGTGCAGCAGCACATCGAGAGCAAGCTCCTGGGCT 150022116 44258 NM_000066.3(C8B):c.361C>T (p.Arg121Ter) C8B Sep 01, 2009 MedGen:C3151080,OMIM:613789 Complement component 8 deficiency type 2 germline 1 56956799 GTTACCAACAGACCATGCGGAAGTCAAGTGCGATGTGAAGGCTTTGTGTGTGCACAGACAG 794726838 187820 NM_001165963.1(SCN1A):c.1970C>T (p.Pro657Leu) SCN1A Dec 20, 2014 MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002 Severe myoclonic epilepsy in infancy de novo 2 166043742 GCAATGGTGTGGTTTCCTTGGTTGGTGGACCTTCAGTTCCTACATCGCCTGTTGGACAGCT 1060503526 394265 NM_000297.3(PKD2):c.973C>T (p.Arg325Ter) PKD2 Sep 20, 2016 MedGen:CN119611;MedGen:CN517202;MedGen:CN169374 Polycystic kidney disease, autosomal dominant;not provided;not specified germline 4 88038380 CTGTTAGGGGTTCCACGAATACGGCAACTCCGAGTCAGAAATGGATCCTGCTCTATCCCCC 202193096 185948 NM_004608.3(TBX6):c.434C>T (p.Pro145Leu) TBX6 Jan 22, 2015 MedGen:C1852521,OMIM:122600 Spondylocostal dysostosis 5 germline 16 30089130 CCCGCTACTTGTTTCTTCTGGATGTGATTCCGGTGGATGGGGCTCGCTACCGCTGGCAGGG 121913059 31597 NM_000186.3(CFH):c.3628C>T (p.Arg1210Cys) CFH Jul 01, 2015 MedGen:C1853147,OMIM:610698;MedGen:C2749604,OMIM:235400;MedGen:C0398777,OMIM:609814,Orphanet:ORPHA200421,SNOMED CT:234622003 Age-related macular degeneration 4;Atypical hemolytic-uremic syndrome 1;Factor H deficiency germline 1 196747245 GTGTGTAAACGGGGATATCGTCTTTCATCACGTTCTCACACATTGCGAACAACATGTTGGG 104894202 31995 NM_001885.2(CRYAB):c.451C>T (p.Gln151Ter) CRYAB Dec 01, 2003 MedGen:C1837317,OMIM:608810,Orphanet:ORPHA399058 Alpha-B crystallinopathy germline 11 111908841 GGGGTCCTCACTGTGAATGGACCAAGGAAACAGGTCTCTGGCCCTGAGCGCACCATTCCCA 199472944 38732 NM_000238.3(KCNH2):c.1841C>T (p.Ala614Val) KCNH2 Dec 30, 2016 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MeSH:D008133,MedGen:C0023976,SNOMED CT:9651007;MedGen:C3150943,OMIM:613688;MedGen:CN517202 Congenital long QT syndrome;Long QT syndrome;Long QT syndrome 2;not provided germline 7 150951552 GCCCCTCCATCAAGGACAAGTATGTGACGGCGCTCTACTTCACCTTCAGCAGCCTCACCAG 397514519 48114 NM_000557.4(GDF5):c.1195C>T (p.Arg399Cys) GDF5 Oct 01, 2010 MedGen:C3554446,OMIM:615072 Brachydactyly, type a1, c germline 20 35434220 GGCAAGCGACCCAGCAAGAACCTTAAGGCTCGCTGCAGTCGGAAGGCACTGCATGTCAACT 1064796677 404950 NM_170707.3(LMNA):c.1078C>T (p.Gln360Ter) LMNA Jun 02, 2017 MedGen:CN517202 not provided germline 1 156136042 GCAAGGATGCAGCAGCAGCTGGACGAGTACCAGGAGCTTCTGGACATCAAGCTGGCCCTGG 587781213 165768 NM_130838.1(UBE3A):c.1972C>T (p.Gln658Ter) UBE3A Feb 14, 2014 MedGen:C0162635,OMIM:105830,Orphanet:ORPHA72,SNOMED CT:76880004 Angelman syndrome germline 15 25355984 AATGTGGAAGATGACATGATGATCACTTTCCAGATATCACAGACAGATCTTTTTGGTAACC 28931585 32815 NM_000342.3(SLC4A1):c.2608C>T (p.Arg870Trp) SLC4A1 Jun 01, 2001 MedGen:C2675212,OMIM:612653 Spherocytosis type 4 germline 17 44251206 CCCTTCGTCCTCATCCTCACTGTGCCGCTGCGGCGCGTCCTGCTGCCGCTCATCTTCAGGA 80358374 105815 NM_133433.3(NIPBL):c.3445C>T (p.Arg1149Ter) NIPBL Feb 08, 2013 MedGen:CN029798,OMIM:122470 Cornelia de Lange syndrome 1 germline 5 37000513 AGGAGTTCAGGTGGTGGTCGTTATCGAAACCGAAGTCCGTCAGATTCTGACATGGAAGATT 745870321 440139 NM_001080463.1(DYNC2H1):c.4267C>T (p.Arg1423Cys) DYNC2H1 Jun 01, 2017 MedGen:CN674505 Short-rib polydactyly syndrome type III paternal;unknown 11 103158916 ATTTTTTGTTTCTATTTTTATTAGGAAAAACGCTCAGCATTCCCAAGATTTTATTTTATTG 1057519505 362275 NM_003156.3(STIM1):c.1276C>T (p.Arg426Cys) STIM1 Feb 02, 2017 MedGen:C2748557,OMIM:612783,Orphanet:ORPHA317430 Immune dysfunction with T-cell inactivation due to calcium entry defect 2 germline 11 4083300 CTGAGCGAGGTGACAGCAGCATTGCGGGAGCGCCTGCACCGCTGGCAACAGATCGAGATCC 201079485 371260 NM_052968.4(APOA5):c.289C>T (p.Gln97Ter) APOA5 Feb 01, 2017 MedGen:CN517202 not provided germline 11 116790940 CAGGACCCGGTGGGCATGCGGCGGCAGCTGCAGGAGGAGTTGGAGGAGGTGAAGGCTCGCC 63751127 94736 NM_000179.2(MSH6):c.2194C>T (p.Arg732Ter) MSH6 Sep 18, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0009405,Orphanet:ORPHA443090;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Hereditary nonpolyposis colon cancer;Lynch syndrome;not provided germline 2 47800177 TCTGGTGCTATCTTCACCAAAGCCTATCAACGAATGGTGCTAGATGCAGTGACATTAAACA 886043496 271070 NM_004006.2(DMD):c.4174C>T (p.Gln1392Ter) DMD Mar 29, 2016 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Becker muscular dystrophy;Duchenne muscular dystrophy germline X 32411811 ATCCAGGAGTCCCTCACATTCATTGACAAGCAGTTGGCAGCTTATATTGCAGACAAGGTGG 1057516095 354012 NM_172107.3(KCNQ2):c.827C>T (p.Thr276Ile) KCNQ2 Jun 23, 2017 MedGen:C3150986,OMIM:613720,Orphanet:ORPHA439218;MedGen:CN517202 Early infantile epileptic encephalopathy 7;not provided germline 20 63439698 TAGAGCCTGCGGTCCCACAGATCACGCTGACCACCATTGGCTACGGGGACAAGTACCCCCA 387907057 39890 NM_015346.3(ZFYVE26):c.5422C>T (p.Gln1808Ter) ZFYVE26 Oct 06, 2009 MedGen:C1849128,OMIM:270700,Orphanet:ORPHA100996 Spastic paraplegia 15 germline 14 67772109 GTGCCCCCAGCGACACCCCCTGCCAGGCACCAGTGGGTACCGGATGAGACTGAGAGTATCT 769603091 482093 NM_153603.3(COG7):c.1321C>T (p.Gln441Ter) COG7 Jan 10, 2018 MedGen:CN517202 not provided germline 16 23413536 AGGTATGTGTCTGATTTCACCAGCACTCTCCAGTCCATACGAAAGAAGTGCAAACTGGACC 397515559 76601 NM_005629.3(SLC6A8):c.1661C>T (p.Pro554Leu) SLC6A8 Aug 18, 2011 MedGen:C1845862,OMIM:300352,Orphanet:ORPHA52503 Creatine deficiency, X-linked not provided X 153694783 CGCTGGTCTACAACAACACCTACGTGTACCCGTGGTGGGGTGAGGCCATGGGCTGGGCCTT 121917851 24180 NM_000370.3(TTPA):c.400C>T (p.Arg134Ter) TTPA Jul 08, 2014 MedGen:C1848533,OMIM:277460,Orphanet:ORPHA96;MedGen:C4016662 Ataxia with vitamin E deficiency;Ataxia, Friedreich-like, with isolated vitamin E deficiency germline;unknown 8 63066056 CCCAAAGTTTTTACAGCTTATGACGTATTTCGAGTAAGTCTAATCACATCCGAGCTTATTG -1 482100 NM_004380.2(CREBBP):c.2071C>T (p.Gln691Ter) CREBBP Aug 01, 2017 MedGen:CN517202 not provided germline 16 3778053 AACCAGCCAGCCTTACCAGCCCCGGGGGCTCAGCCCCCTGTGATTCCACAGGCACAACCTG 74315462 18103 NM_000487.5(ARSA):c.413C>T (p.Pro138Leu) ARSA Jan 01, 1994 MedGen:C4017094 Metachromatic leukodystrophy, severe germline 22 50627218 TTGGGGTGGGGCCTGAGGGGGCCTTCCTGCCCCCCCATCAGGGCTTCCATCGATTTCTAGG 377449975 434315 NM_000527.4(LDLR):c.1835C>T (p.Ala612Val) LDLR - MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11116988 AAAAGAGGCTGGCCCACCCCTTCTCCTTGGCCGTCTTTGAGGTGTGGCTTACGTACGAGAT 772791252 415700 NM_000411.6(HLCS):c.1693C>T (p.Arg565Ter) HLCS Apr 14, 2017 MedGen:CN517202 not provided germline 21 36759829 GTGCAGATTTCCCTTTAGGATATCAACTTACGAGTGAAGTGGCCCAACGATATTTATTACA 62645917 105431 NM_000372.4(TYR):c.1204C>T (p.Arg402Ter) TYR Jul 14, 2016 MedGen:C0268494,OMIM:203100,Orphanet:ORPHA79431,SNOMED CT:6483008;MedGen:CN517202 Tyrosinase-negative oculocutaneous albinism;not provided germline 11 89284792 TTCCTCTGCAGTATTTTTGAGCAGTGGCTCCGAAGGCACCGTCCTCTTCAAGAAGTTTATC 104893950 18137 NM_005670.3(EPM2A):c.721C>T (p.Arg241Ter) EPM2A Jun 07, 2017 MedGen:C0751783,OMIM:254780,Orphanet:ORPHA501,SNOMED CT:230425004;MedGen:CN517202 Lafora disease;not provided germline 6 145627691 CATGTGTGCTGTGCTTTCCCCACCGCAGGCCGAGTACAGATGCTGCCCCAGGCGGTGTGCC -1 433263 NM_000267.3(NF1):c.7054C>T (p.Gln2352Ter) NF1 Mar 24, 2017 MedGen:CN169374 not specified germline 17 31343063 ATCCGGAATCCTCTGGAGTGGCACTGCAAGCAAATGGATCATTTTGTTGGACTCAATTTCA 886041106 263871 NM_003482.3(KMT2D):c.11770C>T (p.Gln3924Ter) KMT2D Nov 18, 2016 MedGen:CN030661,OMIM:147920 Kabuki syndrome 1 de novo 12 49032935 CAGCAGCAGCAGCAGCAGCTACAACAGCAACAGCAACTTCAGCAGCAACAGCTTCAACAGC 80356758 15883 NM_012463.3(ATP6V0A2):c.2293C>T (p.Gln765Ter) ATP6V0A2 Sep 23, 2010 MedGen:C0268355,OMIM:219200,Orphanet:ORPHA357058,SNOMED CT:73856006 Cutis laxa with osteodystrophy germline 12 123754537 AGGCTCTGGGCGCTTAGCCTGGCTCACGCACGTAAGTTCCTGCTTAGACCTGCAGTTCCCA 104893835 23099 NM_004625.3(WNT7A):c.874C>T (p.Arg292Cys) WNT7A Aug 01, 2006 MedGen:C1848651,OMIM:276820 Ulna and fibula absence of with severe limb deficiency germline 3 13819120 CCGGTGACCGGCAGTGTGGGCACCCAGGGCCGCGCCTGCAACAAGACGGCTCCCCAGGCCA 1064795256 405882 NM_000179.2(MSH6):c.1714C>T (p.Gln572Ter) MSH6 Jul 06, 2016 MedGen:CN517202 not provided germline 2 47799697 GATACTTCACTGGGAAAGTTTTTCATAGGTCAGTTTTCAGATGATCGCCATTGTTCGAGAT 776043976 264572 NM_000070.2(CAPN3):c.1342C>T (p.Arg448Cys) CAPN3 Apr 27, 2017 MedGen:C1869123,OMIM:253600,Orphanet:ORPHA267;MedGen:CN517202 Limb-girdle muscular dystrophy, type 2A;not provided germline 15 42399640 TGGGTACGGGGTTGCTCTGCCGGAGGCTGCCGCAACTTCCCAGGTGGGAGATGCTCTTGAT 876660980 232113 NM_000214.2(JAG1):c.703C>T (p.Arg235Ter) JAG1 Apr 07, 2016 MedGen:C1956125,OMIM:118450;MedGen:CN517202 Alagille syndrome 1;not provided germline 20 10656450 CGCCCTTCTCTGTTTTTTACAGCTATTTGCCGACAAGGCTGCAGTCCTAAGCATGGGTCTT 113994168 33876 NM_000018.3(ACADVL):c.779C>T (p.Thr260Met) ACADVL Dec 30, 2016 MedGen:C3887523,OMIM:201475,Orphanet:ORPHA26793,SNOMED CT:237996001,SNOMED CT:237997005;MedGen:CN517202 Very long chain acyl-CoA dehydrogenase deficiency;not provided germline;unknown 17 7222203 ACAGTAATGGGGGCCTAGCAGACATCTTCACGGTCTTTGCCAAGACACCAGTTACAGATCC 587783292 167760 NM_018136.4(ASPM):c.9454C>T (p.Arg3152Ter) ASPM Jun 26, 2014 MedGen:C1837501,OMIM:608716;MedGen:CN517202 Primary autosomal recessive microcephaly 5;not provided germline 1 197091032 AAAATTCTATGTTTTAAACAGAGATGGTTTCGAGCAAGATTACAAGAAAAGAGATTTATTC 886040159 261713 NM_007294.3(BRCA1):c.3679C>T (p.Gln1227Ter) BRCA1 Oct 18, 2016 MedGen:C2676676,OMIM:604370 Breast-ovarian cancer, familial 1 germline 17 43091852 TCTAGTGAGGATGAAGAGCTTCCCTGCTTCCAACACTTGTTATTTGGTAAAGTAAACAATA 199932303 170218 NM_012275.2(IL36RN):c.304C>T (p.Arg102Trp) IL36RN Nov 25, 2014 MedGen:C0343055,OMIM:614204,Orphanet:ORPHA247353 Pustular psoriasis, generalized germline 2 113062513 GCCAAGGAATCCAAGAGCTTCACCTTCTACCGGCGGGACATGGGGCTCACCTCCAGCTTCG 63749999 94812 NM_000179.2(MSH6):c.3103C>T (p.Arg1035Ter) MSH6 Jun 22, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0009405,Orphanet:ORPHA443090;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Hereditary nonpolyposis colon cancer;Lynch syndrome;not provided germline 2 47801086 AGGGATGTATCATTGAAGGACTGCATGCGGCGACTGTTCTATAACTTTGATAAAAATTACA 121909205 22938 NM_000350.2(ABCA4):c.52C>T (p.Arg18Trp) ABCA4 Jan 01, 2016 MeSH:C535804,MedGen:C1855465,OMIM:248200;MedGen:CN517202 Stargardt disease 1;not provided germline 1 94120994 CAGCTTTTGCTCTGGAAGAACTGGACCCTGCGGAAAAGGCAAAAGGTAACAGTTACTGTCT 373428259 182551 NM_005732.3(RAD50):c.1237C>T (p.Gln413Ter) RAD50 May 23, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 5 132588872 AGACAAGAAGGGGAAGCAAAAACTGCCAACCAACTGATGGCAAGTATTTTGAAATACAGTA 143457874 259767 NM_000094.3(COL7A1):c.8440C>T (p.Arg2814Ter) COL7A1 Jul 19, 2017 MedGen:C0079474,OMIM:226600,SNOMED CT:48528004;MedGen:CN517202 Recessive dystrophic epidermolysis bullosa;not provided germline 3 48565636 TGCCAGGGCCAGTTCATCGCATCTGGATCACGTGAGTAGTTTTCTACTCCCAGAACTTTCT -1 449009 NM_001271208.1(NEB):c.2920C>T (p.Arg974Ter) NEB Nov 03, 2016 MedGen:C1850569,OMIM:256030 Nemaline myopathy 2 germline 2 151682685 TTTGGGTCCTTAGAAATGGAAAAGGCAAAGCGAGCTTCAGACATCCTCAATGAGGTAAAGC 794727861 195662 NM_004006.2(DMD):c.565C>T (p.Gln189Ter) DMD Mar 16, 2015 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Becker muscular dystrophy;Duchenne muscular dystrophy germline X 32809577 GACCTATTTGACTGGAATAGTGTGGTTTGCCAGCAGTCAGCCACACAACGACTGGAACATG 200309328 176122 NM_000138.4(FBN1):c.8080C>T (p.Arg2694Ter) FBN1 Aug 03, 2017 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:CN118826,Orphanet:ORPHA91387;MedGen:CN517202 Marfan syndrome;Marfan syndrome;Thoracic aortic aneurysm and aortic dissection;not provided germline 15 48412715 AGGCACTGTGTTTCTGGAATGGGCATGGGCCGAGGAAACCCAGAGCCACCTGTCAGTGGTG 879255404 246863 NM_015100.3(POGZ):c.3259C>T (p.Arg1087Ter) POGZ Aug 10, 2017 MedGen:CN517202 not provided germline;unknown 1 151405776 CTGCGGCACCACCTGACTCCCCATGCCCGGCGAGCTGTGGCCCACACCCTACCTAAGGATG 148297332 271929 NM_014363.5(SACS):c.12028C>T (p.Gln4010Ter) SACS Apr 15, 2016 MedGen:C1849140,OMIM:270550,Orphanet:ORPHA98 Spastic ataxia Charlevoix-Saguenay type germline 13 23331848 GGAAGATTGCAGTTACTCTTGTCTTCTGAACAGTTCATTACAGGACTGATTAGAATTATGA 1057519289 361791 NM_022089.3(ATP13A2):c.3418C>T (p.Gln1140Ter) ATP13A2 Feb 01, 2017 MedGen:C4310662,OMIM:617225 Spastic paraplegia 78, autosomal recessive germline 1 16986346 CCTCCCTGCCCTTTGCAGAGCGTGCTAGACCAGTGCCTCCCCGCCTGCCTGCGCCGCCTCC -1 425715 NM_183050.3(BCKDHB):c.995C>T (p.Pro332Leu) BCKDHB Jul 07, 2017 MedGen:C0024776,OMIM:248600,SNOMED CT:27718001;MedGen:CN517202 Maple syrup urine disease;not provided germline 6 80273178 CAGGGCGACTGCTAATCAGTCACGAGGCTCCCTTGACAGGCGGCTTTGCATCGGAAATCAG 113994055 20987 NM_003907.2(EIF2B5):c.583C>T (p.Arg195Cys) EIF2B5 Jun 01, 2003 MedGen:C1847967,Orphanet:ORPHA99853 Ovarioleukodystrophy germline 3 184137974 TTCAAGGAGTCATCCCCCAGCCACCCAACTCGTTGCCACGAAGACAATGTGGTAGTGGCTG 878853824 238823 NM_000251.2(MSH2):c.790C>T (p.Gln264Ter) MSH2 Aug 18, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Lynch syndrome;not provided germline 2 47412558 AATAGTGCTGTATTGCCAGAAATGGAGAATCAGGTACATGGATTATAAATGTGAATTACAA 398124119 100811 NM_004369.3(COL6A3):c.175C>T (p.Arg59Ter) COL6A3 Nov 01, 2017 MedGen:CN029274,OMIM:158810;MedGen:CN033863,OMIM:254090;MedGen:CN517202 Bethlem myopathy 1;Ullrich congenital muscular dystrophy 1;not provided germline 2 237395121 ACCATTGGAGAGGAACATTTCCAACTTGTTCGAGAGTTTCTATATGATGTTGTAAAATCCT 267607078 33431 NM_018013.3(SOBP):c.1981C>T (p.Arg661Ter) SOBP Nov 12, 2010 MedGen:C3150924,OMIM:613671 Mental retardation, anterior maxillary protrusion, and strabismus germline 6 107634825 GACGGCGTCATCGACCTGACCGTGGGCCACCGAGCCCGGCTGCACAACGTGATCCACCGCG 267607554 57260 NM_170707.3(LMNA):c.961C>T (p.Arg321Ter) LMNA Sep 01, 2016 EFO:EFO_0000407,Human Phenotype Ontology:HP:0001644,MedGen:C0007193,Orphanet:ORPHA217604,SNOMED CT:195021004;MedGen:CN517202 Primary dilated cardiomyopathy;not provided germline 1 156135925 CTTCAGCTGGCAGCCAAGGAGGCGAAGCTTCGAGACCTGGAGGACTCACTGGCCCGTGAGC 398122957 94563 NM_024582.4(FAT4):c.11455C>T (p.Arg3819Ter) FAT4 Dec 03, 2013 MedGen:C3809875,OMIM:615546 Van Maldergem syndrome 2 germline 4 125452471 GGCCCATGTCAGAATGGAGGGAGCTGTCTACGAAGATTGGCTGTGAGCTCCGTATTAAAAA 746661607 445143 NM_000059.3(BRCA2):c.6298C>T (p.Gln2100Ter) BRCA2 Mar 03, 2017 MedGen:CN517202 not provided germline 13 32340653 CATAGTCTTCACTATTCACCTACGTCTAGACAAAATGTATCAAAAATACTTCCTCGTGTTG 104894810 25470 NM_000166.5(GJB1):c.424C>T (p.Arg142Trp) GJB1 Jul 18, 2016 MedGen:CN118851;MedGen:C0393808,OMIM:302800,Orphanet:ORPHA101075,SNOMED CT:230552007;MedGen:CN517202 Charcot-Marie-Tooth Neuropathy X;X-linked hereditary motor and sensory neuropathy;not provided germline X 71224131 TGGTGGACCTATGTCATCAGCGTGGTGTTCCGGCTGTTGTTTGAGGCCGTCTTCATGTATG 267607185 27000 NM_014425.4(INVS):c.2719C>T (p.Arg907Ter) INVS Apr 01, 2009 MedGen:C1865872,OMIM:602088,SNOMED CT:444558002 Infantile nephronophthisis germline 9 100292976 GAGCTCCGACTGCAGATAATTCAGAGAGAACGAAGGAGGAAGGAGCTGTTTCGCAAAAAGA 886039496 259946 NM_005097.3(LGI1):c.931C>T (p.Arg311Ter) LGI1 Aug 27, 2015 MedGen:CN517202 not provided germline 10 93797060 CAGCTGTTTGGTGGCTCTCACATCTATAAGCGAGACAGTTTTGCAAATAAATTCATAAAAA 104894753 25883 NM_000054.4(AVPR2):c.1009C>T (p.Arg337Ter) AVPR2 May 16, 2016 MedGen:C1563705,OMIM:304800;MedGen:CN517202 Nephrogenic diabetes insipidus, X-linked;not provided germline X 153906621 TCTTTCAGCAGCAGCGTGTCCTCAGAGCTGCGAAGCTTGCTCTGCTGTGCCCGGGGACGCA 121918161 16014 NM_032322.3(RNF135):c.727C>T (p.Gln243Ter) RNF135 Aug 01, 2007 MedGen:C3280095,OMIM:614192,Orphanet:ORPHA137634 Macrocephaly, macrosomia, facial dysmorphism syndrome germline 17 30997289 CCGTCTTCCTCCTCATGCCCATTGCCTGACCAGAGCCACCCTGCACTCAGGAGAGCTTCTC 181969865 263785 NM_005993.4(TBCD):c.2314C>T (p.Arg772Cys) TBCD Nov 16, 2016 MedGen:C4310671,OMIM:617193 Encephalopathy, progressive, early-onset, with brain atrophy and thin corpus callosum germline 17 82924992 GCTGAGCTTCGGAACCCCGAGGAGATGACTCGCTGTGGCTTCTCGTTGGCCTTGGGCGCCC 562767308 481834 NM_021224.5(ZNF462):c.3202C>T (p.Arg1068Ter) ZNF462 Nov 17, 2017 MedGen:CN517202 not provided germline 9 106927114 GCTTCCTACTTTAGGATCCAGAAAACTATGCGAATGGTGTCTGTGGACAGGGGCTCTGCCC 121912420 29994 NM_000185.3(SERPIND1):c.1385C>T (p.Pro462Leu) SERPIND1 Jan 01, 2001 MedGen:C0398626,OMIM:612356,SNOMED CT:234468009 Heparin cofactor II deficiency germline 22 20786951 CCACCACTGTGACCACGGTGGGGTTCATGCCGCTGTCCACCCAAGTCCGCTTCACTGTCGA 587783548 169899 NM_178151.2(DCX):c.386C>T (p.Ser129Leu) DCX Aug 07, 2013 Human Phenotype Ontology:HP:0002282,MedGen:C0008519 Heterotopia germline X 111401309 TTGCCTTAGGGGAAAGCTATGTCTGTTCCTCAGACAACTTCTTTAAAAAGGTGGAGTACAC -1 481862 NM_000494.3(COL17A1):c.3046C>T (p.Gln1016Ter) COL17A1 Dec 05, 2017 MedGen:CN517202 not provided germline 10 104038430 TCTATCAGCAGCTCTGGCCAGGAGATTCAGCAGTACATCTCTGAGTACATGCAGAGTGAGT 746797123 260446 NM_198428.2(BBS9):c.1759C>T (p.Arg587Ter) BBS9 Jun 27, 2016 MedGen:C1859567,OMIM:615986 Bardet-Biedl syndrome 9 unknown 7 33367832 GTAATGGGTTTTCACTTCTTAGGAGGTGCTCGAATTACTGTTCTTGCTTCCAAAACTTCTC 869038795 259712 NM_001256850.1(TTN):c.76114C>T (p.Arg25372Ter) TTN Jan 24, 2017 MedGen:C1858763,OMIM:604145;MedGen:C1838244,OMIM:600334,Orphanet:ORPHA609;MedGen:C1861065,OMIM:613765;MedGen:C1863599,OMIM:603689,Orphanet:ORPHA178464;MedGen:C1837342,OMIM:608807,Orphanet:ORPHA140922;MedGen:C2673677,OMIM:611705,Orphanet:ORPHA289377;MedGen:CN517202 Dilated cardiomyopathy 1G;Distal myopathy Markesbery-Griggs type;Familial hypertrophic cardiomyopathy 9;Hereditary myopathy with early respiratory failure;Limb-girdle muscular dystrophy, type 2J;Myopathy, early-onset, with fatal cardiomyopathy;not provided germline 2 178565095 TGCCAAATAAGCAACTACATTGTAGAGAAGCGAGATACAACCACCACCACTTGGCACATGG 1060501494 395141 NM_022455.4(NSD1):c.6487C>T (p.Gln2163Ter) NSD1 Dec 17, 2016 MedGen:C0004903,OMIM:130650,Orphanet:ORPHA116,SNOMED CT:81780002 Beckwith-Wiedemann syndrome germline 5 177293855 TTTTCAGGGAAATGGGAATGTCCGTGGCATCAGTGTGACATCTGCGGGAAGGAAGCAGCCT 121917704 28877 NM_005247.2(FGF3):c.310C>T (p.Arg104Ter) FGF3 Sep 20, 2012 MedGen:C1853144,OMIM:610706,Orphanet:ORPHA90024 Deafness with labyrinthine aplasia microtia and microdontia (LAMM) germline 11 69816334 GGGCGGTACCTGGCCATGAACAAGAGGGGACGACTCTATGCTTCGGTGAGTCCAGGCTGTC 104895219 27375 NM_001065.3(TNFRSF1A):c.236C>T (p.Thr79Met) TNFRSF1A Nov 15, 2016 MedGen:C1275126,OMIM:142680,Orphanet:ORPHA32960,SNOMED CT:403833009;MedGen:CN517202 TNF receptor-associated periodic fever syndrome (TRAPS);not provided germline 12 6333823 ACAATGACTGTCCAGGCCCGGGGCAGGATACGGACTGCAGGGAGTGTGAGAGCGGCTCCTT 760905589 205046 NM_001080508.2(TBX18):c.1570C>T (p.His524Tyr) TBX18 Aug 06, 2015 Gene:7945,MedGen:C1840451,OMIM:143400 Multicystic renal dysplasia, bilateral germline 6 84736939 CATCAGGGTTCCTATAATACTTTTAGATTACACAGCCCCTGTGCACTATATGGATATAACT 199469628 106407 NM_017415.2(KLHL3):c.1019C>T (p.Ala340Val) KLHL3 - Gene:7830,MedGen:C1449844,OMIM:145260,Orphanet:ORPHA757,SNOMED CT:15689008 Pseudohypoaldosteronism, type 2 germline 5 137639862 TTGCTGAGCTTCCTTCCAGAAGATGCAGAGCAGGTGAGCAGCCTCCCAGTTCTGCAAGCTG 121908370 20185 NM_005709.3(USH1C):c.91C>T (p.Arg31Ter) USH1C Jan 01, 2001 MedGen:C1848604,OMIM:276904 Usher syndrome, type 1C germline 11 17533268 GCAGAGAAGGACTATCTCTATGATGTGCTGCGAATGTACCACCAGTAAGTGTGCTGGGTCC 63750936 96152 NM_000251.2(MSH2):c.1477C>T (p.Gln493Ter) MSH2 May 08, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Hereditary cancer-predisposing syndrome;Lynch syndrome germline 2 47463121 GAAATAATGAATGACTTGGAAAAGAAGATGCAGTCAACATTAATAAGTGCAGCCAGAGATC 63751274 96629 NM_000251.2(MSH2):c.643C>T (p.Gln215Ter) MSH2 Sep 05, 2013 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Lynch syndrome germline 2 47410370 GAGACTGCTGGAGACATGGGGAAACTGAGACAGGTAAGCAAATTGAGTCTAGTGATAGAGG 796052119 200889 NM_031924.5(RSPH3):c.1105C>T (p.Arg369Ter) RSPH3 Jul 02, 2015 MedGen:C4225311,OMIM:616481 Ciliary dyskinesia, primary, 32 germline 6 158982502 GAAGTTCAACGACTTGAAGAGCAAGAGAGGCGACACCGAGAAGAAAAAGTATATATAATTA 371886102 481745 NM_000046.4(ARSB):c.571C>T (p.Arg191Ter) ARSB Nov 01, 2017 MedGen:CN517202 not provided germline 5 78964535 TGTACATTAATTGACGCTCTGAATGTCACACGATGTGCTCTTGATTTTCGAGATGGCGAAG 137852771 23771 NM_000182.4(HADHA):c.1678C>T (p.Arg560Ter) HADHA Sep 01, 1996 MedGen:C0342786,OMIM:609015,SNOMED CT:237999008 Mitochondrial trifunctional protein deficiency germline 2 26194581 TGTCTTGCGCCCATGATGTCTGAAGTCATCCGAATCCTCCAGGTTGGTATTGCTCTCCAGA 267606711 29842 NM_001039933.2(CD79B):c.241C>T (p.Gln81Ter) CD79B Sep 03, 2007 MedGen:C3150207,OMIM:612692 Agammaglobulinemia 6, autosomal recessive germline 17 63930266 GCCTCCGGCAATGTGAGCTGGCTCTGGAAGCAGGAGATGGACGAGAATCCCCAGCAGCTGA 764791523 264839 NM_003119.3(SPG7):c.679C>T (p.Arg227Ter) SPG7 May 06, 2016 MedGen:CN517202 not provided germline 16 89526389 GCAAATATTGACAAGTTTGAAGAGAAGCTTCGAGCAGCTGAAGATGAGCTGAATATCGAGG 879255280 245206 NM_005631.4(SMO):c.1234C>T (p.Leu412Phe) SMO Jul 28, 2016 MedGen:C0795915,OMIM:601707 Craniofacial malformations, asymmetric, with polysyndactyly and abnormal skin and gut development somatic 7 129206557 GGCTTCGTGCTGGCCCCAATCGGCCTGGTGCTCATCGTGGGAGGCTACTTCCTCATCCGAG 147321712 76712 NM_194248.2(OTOF):c.4483C>T (p.Arg1495Ter) OTOF Jan 13, 2015 MedGen:C1832828,OMIM:601071;Human Phenotype Ontology:HP:0000365,MedGen:C0018772 Deafness, autosomal recessive 9;Hearing impairment unknown 2 26466731 CCGAGCAATGACCCCATCAATGTGCTGGTCCGAGTCTATGTGGTCCGGGTGAGACTCCCGT 875989942 434341 NM_000527.4(LDLR):c.2312-3C>T LDLR - MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11128005 GACCTGGGCCTCACTCTTGCTTCTCTCCTGCAGCTCTGGGCGACGTTGCTGGCAGAGGAAA 121918696 27596 NM_001252634.1(THRB):c.958C>T (p.Arg320Cys) THRB Oct 20, 2010 MedGen:C2937288,OMIM:188570 Thyroid hormone resistance, generalized, autosomal dominant germline 3 24127685 ATGGAGATCATGTCCCTTCGCGCTGCTGTGCGCTATGACCCAGAAAGTGAGACTTTAACCT 796053359 202297 NM_003165.3(STXBP1):c.703C>T (p.Arg235Ter) STXBP1 Sep 09, 2016 MedGen:C2677326,OMIM:612164;MedGen:CN517202 Early infantile epileptic encephalopathy 4;not provided germline 9 127666205 AAGGCACGCTCCCAGCTCCTGATCCTGGATCGAGGCTTTGACCCCAGCTCCCCTGTGCTCC 797045013 205018 NM_014191.3(SCN8A):c.2300C>T (p.Thr767Ile) SCN8A Jul 01, 2014 MedGen:C3281191,OMIM:614558 Early infantile epileptic encephalopathy 13 de novo 12 51751523 TAGCCATCACCATCTGCATCGTCCTGAATACACTGTTTATGGCAATGGAGCACCATCCTAT 730881815 473167 NM_000179.2(MSH6):c.1030C>T (p.Gln344Ter) MSH6 Mar 06, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 2 47799013 AAGAATACTTTGAGAGCTTTCTCTGCCCCTCAAAATTCTGAATCCCAAGCCCACGTTAGTG -1 477758 NM_024675.3(PALB2):c.682C>T (p.Gln228Ter) PALB2 Apr 01, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 16 23635864 GAAGACAGTGTATTAATTCCACCAACTGCCCAACCAGAAAAAGGTGTTGATACATTCCTAA -1 457473 NM_000083.2(CLCN1):c.2419C>T (p.Gln807Ter) CLCN1 Oct 18, 2016 MedGen:C0751360,OMIM:255700,SNOMED CT:20305008 Congenital myotonia, autosomal recessive form germline 7 143350387 TCCTCTGGCTGACAGATTGAGGCCTGGGAGCAGGAGCAGCTGAGCCAGCCTGTCTGTTTTG 727504145 177431 NM_006363.5(SEC23B):c.1489C>T (p.Arg497Cys) SEC23B Jan 23, 2014 MedGen:CN517202 not provided germline 20 18542380 TATCAGCACTCCAGCACCCAGAGACGCATCCGCGTGACCACCATCGCCCGAAAGTAAGCAG 397516662 53360 NM_001399.4(EDA):c.457C>T (p.Arg153Cys) EDA Jun 08, 2016 Human Phenotype Ontology:HP:0007607,MedGen:C1706004,Orphanet:ORPHA238468;MedGen:CN517202 Hypohidrotic ectodermal dysplasia;not provided germline X 69957087 GAAAAGCCATACTCTGAAGAAGAAAGTAGGCGTGTTCGCCGCAATAAAAGAAGCAAAAGCA 886041228 264800 NM_002734.4(PRKAR1A):c.46C>T (p.Arg16Ter) PRKAR1A May 04, 2017 MedGen:C2607929,OMIM:160980;MedGen:CN517202 Carney complex, type 1;not provided germline 17 68515445 ACCGCCGCCAGTGAGGAGGCACGCAGCCTTCGAGAATGTGAGCTCTACGTCCAGAAGCATA 387906971 39623 NM_006445.3(PRPF8):c.6353C>T (p.Ser2118Phe) PRPF8 Dec 02, 2011 MedGen:C1838702,OMIM:600059 Retinitis pigmentosa 13 germline 17 1653558 AGAATGTGCTTAAGAAGTTCATCTGCATATCTGACCTTCGGGCCCAAGTGAGTAAGTGGAC 863224983 213878 NM_004006.2(DMD):c.1663C>T (p.Gln555Ter) DMD May 31, 2013 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Duchenne muscular dystrophy germline X 32573786 AGATGGACAGAAGACCGCTGGGTTCTTTTACAAGACATCCTTCTCAAATGGCAACGTCTTA 764091969 205165 NM_015631.5(TCTN3):c.877C>T (p.Gln293Ter) TCTN3 Aug 22, 2014 MedGen:C0406727,OMIM:258860,SNOMED CT:239031000 Orofacial-digital syndrome IV germline 10 95686506 TCCTAGGTTCCAAGAAGCATGACTGATCCACAGAATATGGAGGTATGATGCTGTTGTACCA 267606638 18193 NM_139057.3(ADAMTS17):c.760C>T (p.Gln254Ter) ADAMTS17 Nov 01, 2009 MedGen:C2750787,OMIM:613195,Orphanet:ORPHA363992 Weill-Marchesani-like syndrome germline 15 100281258 ATGGTGCAGTACCACGGGGCCGAGGCCGCCCAGAGGTTCATCCTGACCGTCATGAACATGG -1 481566 NM_002016.1(FLG):c.3010C>T (p.Gln1004Ter) FLG Jul 31, 2017 MedGen:CN517202 not provided germline 1 152311876 GGTCACGGGCACTCTGCAGACAGCTCCAGACAATCAGGAACTCCTCACGCAGAGACTTCCT 121907893 18552 NM_144585.3(SLC22A12):c.650C>T (p.Thr217Met) SLC22A12 May 23, 2002 MedGen:C0473219,OMIM:220150,SNOMED CT:236478009 Familial renal hypouricemia germline 11 64593548 CCTTTGCCGTGGCAGGCGTCATGATGAACACGGGCACTCTCCGTAGGTCTCTGACCTGGCG 398123371 98857 NM_000426.3(LAMA2):c.2962C>T (p.Gln988Ter) LAMA2 Jun 04, 2013 MedGen:C1263858,OMIM:607855,Orphanet:ORPHA258,SNOMED CT:111503008 Merosin deficient congenital muscular dystrophy germline 6 129297790 GACTGTGAAGAGAGTGGACAATGTTGGTGCCAACCTGGAGTCACAGGGAAGAAATGTGACC 200793488 424340 NM_000527.4(LDLR):c.2230C>T (p.Arg744Ter) LDLR Mar 30, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11123263 ACAGCCGTAAGGACACAGCACACAACCACCCGACCTGTTCCCGACACCTCCCGGCTGCCTG 398124348 101827 NM_019109.4(ALG1):c.1079C>T (p.Ala360Val) ALG1 Feb 06, 2014 MeSH:D030342,MedGen:C0950123;MedGen:CN517202 Inborn genetic diseases;not provided germline 16 5082565 TGACCCACCCCTCTTGCCTAGCAGGGTCGGCGGACCTGGGTGTCTGTCTGCACACGTCCTC 63750200 96258 NM_000251.2(MSH2):c.1777C>T (p.Gln593Ter) MSH2 Jun 19, 2017 MedGen:C0009405,Orphanet:ORPHA443090;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Hereditary nonpolyposis colon cancer;Lynch syndrome germline 2 47475042 TATTTTTATACAGGCTATGTAGAACCAATGCAGACACTCAATGATGTGTTAGCTCAGCTAG 137852861 16889 NM_001193311.1(SUGCT):c.535C>T (p.Arg179Ter) SUGCT Nov 01, 2008 MedGen:C0342873,OMIM:231690,Orphanet:ORPHA35706,SNOMED CT:238070003 Glutaryl-CoA oxidase deficiency germline 7 40237664 GGGTATGGTCAGACAGGTCCAATTTCTCAGCGAGCTGGTTATGATGCTGTTGCCTCGGCTG 121917819 22036 NM_001264.4(CDSN):c.643C>T (p.Gln215Ter) CDSN Jun 01, 2003 MedGen:C1840299,OMIM:146520,Orphanet:ORPHA90368 Hypotrichosis 2 germline 6 31116972 TCCAGCAGTGGCCAAAGCGTCAGCTCCAACCAGCGTCCCTGTAGTTCGGACATCCCCGACT 794729198 198602 NM_001127660.1(MFN2):c.746C>T (p.Ser249Phe) MFN2 Sep 17, 2015 MedGen:C1836485,OMIM:609260,Orphanet:ORPHA99947 Charcot-Marie-Tooth disease, type 2A2A germline;unknown 1 11999025 ACTTCTTCCACAAGGTGAGTGAGCGTCTCTCCCGGCCAAACATCTTCATCCTGAACAACCG 267607512 77340 NM_002055.4(GFAP):c.1126C>T (p.Arg376Trp) GFAP Jan 08, 2015 MedGen:C0270726,OMIM:203450,Orphanet:ORPHA58,SNOMED CT:81854007;MedGen:CN517202 Alexander's disease;not provided germline 17 44911237 TACAGGAAGCTGCTAGAGGGCGAGGAGAACCGGTGAGCCCTCATCACAGCCCCTGGGGAAG 397514683 51205 NM_016938.4(EFEMP2):c.679C>T (p.Arg227Cys) EFEMP2 Apr 26, 2013 MedGen:C3280798,OMIM:614437 Autosomal recessive cutis laxa type 1B germline 11 65869905 TGCTTCAACTCCTATGGGACCTTCCTGTGTCGCTGCCACCAGGGCTATGAGCTGCATCGGG 542420576 187779 NM_001165963.1(SCN1A):c.3106C>T (p.Gln1036Ter) SCN1A Dec 20, 2014 MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002 Severe myoclonic epilepsy in infancy de novo 2 166036371 GTGAAAAGAAAAATATATGAATTTATTCAACAGTCCTTCATTAGGAAACAAAAGATTTTAG 879255309 246794 NM_000059.3(BRCA2):c.3883C>T (p.Gln1295Ter) BRCA2 Apr 04, 2017 MedGen:C0677776,Orphanet:ORPHA145;Human Phenotype Ontology:HP:0100013,MeSH:D001943,MedGen:C1458155,Orphanet:ORPHA180250,SNOMED CT:126926005;MedGen:CN517202 Hereditary breast and ovarian cancer syndrome;Neoplasm of the breast;not provided germline 13 32338238 GAAAAAAATAATAAATGCCAACTGATATTACAAAATAATATTGAAATGACTACTGGCACTT 111033345 52517 NM_000307.4(POU3F4):c.499C>T (p.Arg167Ter) POU3F4 Jun 10, 2008 MedGen:CN043648,Orphanet:ORPHA87884 Nonsyndromic hearing loss and deafness germline X 83508823 GCCTCTGCACAGAGCCTGCACCCGGTGCTCCGAGAGCCCCCGGATCACGGCGAACTGGGCT 121918040 28557 NM_000297.3(PKD2):c.2224C>T (p.Arg742Ter) PKD2 Dec 20, 2016 MedGen:C2751306,OMIM:613095;MedGen:CN517202;MedGen:CN169374 Polycystic kidney disease 2;not provided;not specified germline 4 88065479 GGAGGAGGCAAGTTAAACTTTGACGAACTTCGACAAGATCTCAAAGGGTGAGAATCATGCT 80359818 31157 NM_006516.2(SLC2A1):c.376C>T (p.Arg126Cys) SLC2A1 Jan 20, 2017 MedGen:C1832855,OMIM:601042,Orphanet:ORPHA53583;MedGen:C3553859,OMIM:614847;MedGen:CN030711,OMIM:606777;MedGen:C3149117;MedGen:C1842534,OMIM:612126,Orphanet:ORPHA98811;MedGen:CN517202 Dystonia 9;Epilepsy, idiopathic generalized, susceptibility to, 12;GLUT1 deficiency syndrome 1;GLUT1 deficiency syndrome 1, autosomal recessive;GLUT1 deficiency syndrome 2;not provided germline 1 42930766 GGCAAGTCCTTTGAGATGCTGATCCTGGGCCGCTTCATCATCGGTGTGTACTGCGGCCTGA 59616921 18036 NM_000226.3(KRT9):c.487C>T (p.Arg163Trp) KRT9 Jun 27, 2016 Human Phenotype Ontology:HP:0007559,MedGen:C1721006,OMIM:144200,Orphanet:ORPHA2199;MedGen:C1840427;MedGen:CN517202 Epidermolytic palmoplantar keratoderma;Palmoplantar keratoderma, epidermolytic, with knuckle pads;not provided germline 17 41571506 GAGAAGAGCACCATGCAGGAACTCAATTCTCGGCTGGCCTCTTACTTGGATAAGGTGCAGG 200777850 480556 NM_007327.3(GRIN1):c.649C>T (p.Arg217Trp) GRIN1 Feb 22, 2018 na NEURODEVELOPMENTAL DISORDER WITH HYPERKINETIC MOVEMENTS WITHOUT SEIZURES, AUTOSOMAL RECESSIVE germline 9 137149087 CTGCTGATGGAGGCGAAAGAGCTGGAGGCCCGGGTCATCATCCTTTCTGCCAGGTGAGGCT 141576417 419594 NM_000038.5(APC):c.607C>T (p.Gln203Ter) APC May 23, 2017 MedGen:C2713442,OMIM:175100;MedGen:C0027672,SNOMED CT:699346009 Familial adenomatous polyposis 1;Hereditary cancer-predisposing syndrome germline 5 112780865 GCAAGGCAAATCAGAGTTGCGATGGAAGAACAACTAGGTACCTGCCAGGATATGGAAAAAC 17848368 22618 NM_003356.3(UCP3):c.208C>T (p.Arg70Trp) UCP3 Sep 02, 2008 MedGen:C4016768 Obesity, severe, and type II diabetes germline 11 74006298 GGCGTGCTGGGCACCATCCTGACCATGGTGCGGACTGAGGGTCCCTGCAGCCCCTACAATG 587777214 108177 NM_001040436.2(YARS2):c.1078C>T (p.Arg360Ter) YARS2 Dec 17, 2013 MedGen:C3150802,OMIM:613561 Myopathy, lactic acidosis, and sideroblastic anemia 2 germline 12 32750744 GCAGCAGAAGTAACAAAGCTTGTTCATGGACGAGAAGGATTGGATTCTGCTAAAAGGTAGT 439898 76478 NM_000157.3(GBA):c.475C>T (p.Arg159Trp) GBA Jan 15, 2014 MedGen:C0017205,Orphanet:ORPHA355;MedGen:C1961835,OMIM:230800,SNOMED CT:62201009 Gaucher disease;Gaucher's disease, type 1 germline 1 155238630 TTTTCTGTAGGAATCGGATATAACATCATCCGGGTACCCATGGCCAGCTGTGACTTCTCCA 863225064 213972 NM_020964.2(EPG5):c.7447C>T (p.Arg2483Ter) EPG5 Nov 16, 2017 MedGen:C1855772,OMIM:242840,Orphanet:ORPHA1493 Absent corpus callosum cataract immunodeficiency germline;inherited 18 45855683 CTTCTGACCTCTCCCTAATGCCTAAGGTTCCGAGTGGTTGCCCGAAGCATGGCTGCCTTCC 119103262 433691 NM_014874.3(MFN2):c.493C>T (p.His165Tyr) MFN2 Jan 26, 2017 MedGen:CN169374 not specified germline 1 11997315 CTCTGCCATCAGACTGTGAACCAGCTGGCCCATGCCCTCCACCAGGACAAGCAGCTCCATG 797044942 205301 NM_001042492.2(NF1):c.4729C>T (p.Gln1577Ter) NF1 - MeSH:D030342,MedGen:C0950123 Inborn genetic diseases germline 17 31265233 TAATTACTCTGTTATTTTTCTTTTAGGCATCAGGTACATGAAAAAGAAGAATTCAAGGCTT 199422304 38856 NM_198253.2(TERT):c.2701C>T (p.Arg901Trp) TERT May 10, 2012 MedGen:C1857144,OMIM:224230;MedGen:C3151444 Dyskeratosis congenita autosomal recessive 1;Dyskeratosis congenita, autosomal recessive, 4 germline 5 1264546 GTCCCTGAGTATGGCTGCGTGGTGAACTTGCGGAAGACAGTGGTGAACTTCCCTGTAGAAG 121918015 28719 NM_000478.5(ALPL):c.323C>T (p.Pro108Leu) ALPL Aug 01, 2003 MedGen:C1840322,Orphanet:ORPHA247685 Odontohypophosphatasia germline 1 21563135 TGCAGACGTACAACACCAATGCCCAGGTCCCTGACAGTGCCGGCACCGCCACCGCCTACCT 763364977 486887 NM_001271208.1(NEB):c.24559C>T (p.Arg8187Ter) NEB Jul 28, 2016 MedGen:C0206157,Orphanet:ORPHA607,SNOMED CT:75072002 Nemaline myopathy germline 2 151496308 ACTCCTTTAGCTGTCACTCCCGAGATGGAGCGAGTCAAACACAATCAAGAAAATATTAGCT 121918731 27538 NM_000359.2(TGM1):c.919C>T (p.Arg307Trp) TGM1 Aug 01, 2001 MedGen:C3536797,OMIM:242300 Autosomal recessive congenital ichthyosis 1 germline 14 24259769 GTGCTGGATGCCTGCTTATACATCCTGGACCGGCGGGGGATGCCATATGGAGGCCGTGGAG 747319628 314093 NM_000553.4(WRN):c.2959C>T (p.Arg987Ter) WRN Feb 03, 2017 MedGen:C0043119,OMIM:277700,Orphanet:ORPHA902,SNOMED CT:51626007 Werner syndrome germline 8 31132498 TTTGGAATTGGGCTTCCAATTTTATTTCTCCGAGGATCTGTAAGTATATATCTGTGAATTC 387906933 39518 NM_033517.1(SHANK3):c.1606C>T (p.Arg536Trp) SHANK3 Apr 27, 2010 MedGen:C3151380,OMIM:613950 Schizophrenia 15 germline 22 50698797 GAGGAAGTGCAGATGAGGCAGCATGACACACGGCCTGGTGAGTGACCCCACGGCTCCCCGG 767664526 222930 NM_005879.2(TRAIP):c.553C>T (p.Arg185Ter) TRAIP Jan 29, 2016 MedGen:C4225212,OMIM:616777 Seckel syndrome 9 germline 3 49841890 AGCCAGCGCCCTGAGGTGGAGGAGATGATCCGAGACATGGGTGTGGGACAGTCAGCGGTGG 121434292 18583 NM_130849.3(SLC39A4):c.283C>T (p.Arg95Cys) SLC39A4 Jun 01, 2003 MedGen:C0221036,OMIM:201100,Orphanet:ORPHA37,SNOMED CT:37702000 Hereditary acrodermatitis enteropathica germline 8 144416001 GGCCCGGTCCTGGAGGCCAGGTACGTCGCCCGCCTCAGTGCCGCCGCCGTCCTGTACCTCA 121918113 32841 NM_004320.4(ATP2A1):c.592C>T (p.Arg198Ter) ATP2A1 Oct 01, 1996 MedGen:C1832918,OMIM:601003,Orphanet:ORPHA53347 Brody myopathy germline 16 28887236 ATCAAACACACGGAGCCCGTTCCTGACCCCCGAGCTGTCAACCAGGACAAGAAGAACATGC 869025366 224249 NM_001204.6(BMPR2):c.439C>T (p.Arg147Ter) BMPR2 Aug 31, 2015 MedGen:C0152171,OMIM:178600,SNOMED CT:26174007;MedGen:CN517202 Primary pulmonary hypertension;not provided germline 2 202513739 TTTCTTTTAGGTCCACCTCATTCATTTAACCGAGATGAGACAATAATCATTGCTTTGGCAT 398124181 101060 NM_004737.5(LARGE1):c.1102C>T (p.Gln368Ter) LARGE1 Nov 15, 2012 MedGen:CN517202 not provided germline 22 33381948 GTGCAGCTGTCAGACCACACCCGCTCCGAGCAGTGCTACAGAGACGTGTCTGATCTAAAGG 121918389 32933 NM_000384.2(APOB):c.4429C>T (p.Gln1477Ter) APOB Apr 14, 1992 MedGen:C1862596,Orphanet:ORPHA426,SNOMED CT:60193003 Familial hypobetalipoproteinemia germline 2 21012439 GCTTCAGTTCATTTGGACTCCAAAAAGAAACAGCATTTGTTTGTCAAAGAAGTCAAGATTG 180177111 132156 NM_024675.3(PALB2):c.2323C>T (p.Gln775Ter) PALB2 Aug 03, 2017 MedGen:CN068448;MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast cancer, susceptibility to;Familial cancer of breast;Hereditary cancer-predisposing syndrome;not provided germline;unknown 16 23629831 GACTCAGTCTGTCTTGCCAGTGATACTAAACAATTCGACAGTTCAGGCAGCCCAGCAAAAC 770810694 441560 NM_000486.5(AQP2):c.277C>T (p.Gln93Ter) AQP2 Jul 25, 2017 MedGen:CN517202 not provided germline 12 49951107 GTTCTCCGAGCCGCCTTCTACGTGGCTGCCCAGCTGCTGGGGGCTGTGGCCGGAGCCGCTC 137854448 31782 NM_001972.3(ELANE):c.416C>T (p.Pro139Leu) ELANE Nov 30, 2015 MedGen:C1859966,OMIM:202700;MedGen:CN517202 Severe congenital neutropenia autosomal dominant;not provided germline 19 855613 TCAACGCCAACGTGCAGGTGGCCCAGCTGCCGGCTCAGGGACGCCGCCTGGGCAACGGGGT 797045195 206616 NM_033409.3(SLC52A3):c.955C>T (p.Pro319Ser) SLC52A3 Mar 17, 2015 MedGen:CN029849,OMIM:211530 Brown-Vialetto-Van Laere syndrome 1 germline 20 763616 TTCGTCAACGCGCTCACCAACGGCATGCTGCCCTCTGTGCAGACCTACTCCTGCCTGTCCT 991738444 409070 NM_001170629.1(CHD8):c.4414C>T (p.Arg1472Ter) CHD8 Jul 24, 2015 MedGen:CN517202 not provided germline 14 21400569 CGAGATATTTTATCTCATGGACGCTTCAAGCGACGTATGACTGAACGAGATGTGGAGACCA 776851287 392666 NM_000465.3(BARD1):c.526C>T (p.Gln176Ter) BARD1 May 26, 2016 MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006 Familial cancer of breast germline 2 214781348 CAGCCTGCAATAAAAAAAGATGCAAGTGCTCAGCAAGACTCATATGAATTTGTTTCCCCAA 587783182 167587 NM_139058.2(ARX):c.1111C>T (p.Arg371Ter) ARX Feb 25, 2013 MedGen:CN517202 not provided germline X 25010268 CTGGCCATGAGGCTGGACTTGACCGAGGCCCGAGTCCAGGTGAGCTGCACAACAGAGGGAA 587777574 150458 NM_001301339.1(CHCHD10):c.176C>T (p.Ser59Leu) CHCHD10 Apr 14, 2015 MedGen:C4014648,OMIM:615911;MedGen:C4015513,OMIM:616209,Orphanet:ORPHA457050 Frontotemporal dementia and/or amyotrophic lateral sclerosis 2;Myopathy, isolated mitochondrial, autosomal dominant germline 22 23767459 CGACCACGGCCGCAGGGGTAGCCGTGGGCTCGGCTGTGGGACACGTCATGGGCAGCGCCCT 587783590 169851 NM_178151.2(DCX):c.814C>T (p.Arg272Ter) DCX May 23, 2016 Human Phenotype Ontology:HP:0002282,MedGen:C0008519;MedGen:CN517202 Heterotopia;not provided germline X 111331036 AGCTGTCTGTGTCCTTTTGCCCCAGAATGCCGAGTCATGAAGGGAAACCCATCAGCCACAG 767409395 415589 NM_000152.4(GAA):c.118C>T (p.Arg40Ter) GAA Apr 11, 2017 MedGen:C0017921,OMIM:232300,Orphanet:ORPHA365,SNOMED CT:124462004,SNOMED CT:237967002;MedGen:CN517202 Glycogen storage disease, type II;not provided germline 17 80104704 ATCCTACTCCATGATTTCCTGCTGGTTCCCCGAGAGCTGAGTGGCTCCTCCCCAGTCCTGG 72656314 32376 NM_000088.3(COL1A1):c.3421C>T (p.Arg1141Ter) COL1A1 Jun 30, 2015 MeSH:D010013,MedGen:C0029434,Orphanet:ORPHA666,SNOMED CT:78314001;MedGen:C0023931,OMIM:166200,SNOMED CT:385482004 Osteogenesis imperfecta;Osteogenesis imperfecta type I germline 17 50187486 CCCTCTGGAGCCTCTGGTCCTGCTGGTCCCCGAGTAAGTCATGCCTTCTCTCTCCTCTTCC 63751426 96578 NM_000251.2(MSH2):c.478C>T (p.Gln160Ter) MSH2 Jun 30, 2017 MedGen:C0009405,Orphanet:ORPHA443090;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Hereditary nonpolyposis colon cancer;Lynch syndrome germline 2 47410205 GTTAAAATGTCCGCAGTTGATGGCCAGAGACAGGTTGGAGTTGGGTATGTGGATTCCATAC 397515631 86128 NM_002608.3(PDGFB):c.433C>T (p.Gln145Ter) PDGFB Sep 01, 2011 MedGen:C3809645,OMIM:615483 Idiopathic basal ganglia calcification 5 germline 22 39231645 AACAACCGCAACGTGCAGTGCCGCCCCACCCAGGTGCAGCTGCGACCTGTCCAGGTGCGTA 121918349 22669 NM_003394.3(WNT10B):c.994C>T (p.Arg332Trp) WNT10B Sep 01, 2008 MedGen:C2749665,OMIM:225300 Split-hand/foot malformation 6 germline 12 48966271 CCCACTATGGGCTCCCCAGGGACAAGGGGCCGGGCCTGCAACAAGACCAGCCGCCTGTTGG 367682612 404876 NM_013296.4(GPSM2):c.1093C>T (p.Arg365Ter) GPSM2 Jul 22, 2015 MedGen:CN517202 not provided germline 1 108904155 GTTGGGGATAAAAGTGGTGAACTAACAGCACGACTTAATCTCTCAGACCTTCAAATGGTTC -1 447473 NM_003000.2(SDHB):c.502C>T (p.Gln168Ter) SDHB Jul 03, 2017 MedGen:C1861848,OMIM:115310 Paragangliomas 4 germline 1 17027787 AAGAAGAAGGATGAATCTCAGGAAGGCAAGCAGCAGTATCTGCAGTCCATAGAAGAGCGTG 713993044 171847 NM_004527.3(MEOX1):c.250C>T (p.Gln84Ter) MEOX1 Sep 28, 2013 MedGen:C1859209,OMIM:214300 Klippel-Feil syndrome 2, autosomal recessive germline 17 43661285 CTGCCCCAGGAGGAGCACATCTTCACTGAGCAGCACCCCGCTTTCCCACAGTCCCCCAACT 761651320 415107 NM_000048.3(ASL):c.637C>T (p.Arg213Ter) ASL Aug 03, 2017 MedGen:C0268547,OMIM:207900,Orphanet:ORPHA23,SNOMED CT:41013004;MedGen:CN517202 Argininosuccinate lyase deficiency;not provided germline 7 66087368 GCCATTGCAGGCAATCCCCTGGGTGTGGACCGAGAGCTGCTCCGAGCAGGTGAGACGTCCT 397514643 48633 NM_004625.3(WNT7A):c.664C>T (p.Arg222Trp) WNT7A Nov 01, 2010 MedGen:C1848651,OMIM:276820 Ulna and fibula absence of with severe limb deficiency germline 3 13819330 AAGACGTGCTGGACCACACTGCCACAGTTTCGGGAGCTGGGCTACGTGCTCAAGGACAAGT 63750042 96420 NM_000251.2(MSH2):c.226C>T (p.Gln76Ter) MSH2 May 08, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Lynch syndrome;not provided germline;unknown 2 47408415 TTTTTTTTTTTTTAAGGAGCAAAGAATCTGCAGAGTGTTGTGCTTAGTAAAATGAATTTTG 119462978 17925 NM_032531.3(KIRREL3):c.118C>T (p.Arg40Trp) KIRREL3 Dec 01, 2008 MedGen:C2675487,OMIM:612581 Mental retardation, autosomal dominant 4 germline 11 126562850 GTGCTGGGCTACATGGCCAAGGACAAGTTTCGGAGAATGAATGAAGGTCAGTGAGAACCTC 72653173 44584 NM_000088.3(COL1A1):c.3076C>T (p.Arg1026Ter) COL1A1 May 25, 2017 MeSH:D010013,MedGen:C0029434,Orphanet:ORPHA666,SNOMED CT:78314001;MedGen:C0023931,OMIM:166200,SNOMED CT:385482004;MedGen:CN517202 Osteogenesis imperfecta;Osteogenesis imperfecta type I;not provided germline 17 50188765 GGGGCTCCTGGTGCCGAAGGTTCCCCTGGACGAGACGGTTCTCCTGGCGCCAAGGTAAGAT 121918446 28594 NM_000212.2(ITGB3):c.718C>T (p.Arg240Trp) ITGB3 Jun 01, 1992 MedGen:C0040015,OMIM:273800,Orphanet:ORPHA849,SNOMED CT:32942005 Glanzmann thrombasthenia germline 17 47286363 AATGAGGAAGTGAAGAAGCAGAGTGTGTCACGGAACCGAGATGCCCCAGAGGGTGGCTTTG 199422216 16768 NM_001099287.1(NIPAL4):c.433C>T (p.Arg145Ter) NIPAL4 Jan 05, 2017 MedGen:C2677065,OMIM:612281;MedGen:CN517202 Autosomal recessive congenital ichthyosis 6;not provided germline 5 157463303 AGCGTCATCCTCAAGAAGAAAGGCCTCTTGCGACTCGTGGCCACGGGAGCCACTCGAGCTG 397516153 52080 NM_000257.3(MYH7):c.2513C>T (p.Pro838Leu) MYH7 Dec 15, 2016 MedGen:C3495498,OMIM:192600;MedGen:C0340429,Orphanet:ORPHA217635,SNOMED CT:233878008 Familial hypertrophic cardiomyopathy 1;Familial restrictive cardiomyopathy germline 14 23424935 CCTGGATGAAGCTCTACTTCAAGATCAAGCCGCTGCTGAAGAGTGCAGAAAGAGAGAAGGA 80358305 21331 NM_002335.3(LRP5):c.433C>T (p.Leu145Phe) LRP5 Mar 14, 2013 MedGen:C4016838;MedGen:C0432252,OMIM:259770,Orphanet:ORPHA2788,SNOMED CT:254112001 Exudative vitreoretinopathy 4, autosomal dominant;Osteoporosis with pseudoglioma germline 11 68348188 GCCAACCTCAATGGCACATCCCGGAAGGTGCTCTTCTGGCAGGACCTTGACCAGCCGAGGG 200286768 48429 NM_139242.3(MTFMT):c.994C>T (p.Arg332Ter) MTFMT Jun 01, 2015 MedGen:C3554182,OMIM:614947,Orphanet:ORPHA319524;MedGen:C1838951;MedGen:CN517202 Combined oxidative phosphorylation deficiency 15;Leigh syndrome due to mitochondrial complex I deficiency;not provided germline 15 65003238 TTTGCCCTTTAGGATGGTTGGATTGGTGTTCGATCAGTGATGCTCAAGAAATCACTAACAG 587783699 168903 NM_003482.3(KMT2D):c.15943C>T (p.Gln5315Ter) KMT2D Sep 19, 2013 MedGen:CN030661,OMIM:147920 Kabuki syndrome 1 germline 12 49024687 TGCCCACAGCTGCCCGGGGTGGAGAGCTGTCAAAACTATTTATTCCGCTATGGGCGCCACC 267606814 18255 NM_001079802.1(FKTN):c.919C>T (p.Arg307Ter) FKTN Jun 13, 2017 MedGen:CN355827;MedGen:C0410174,OMIM:253800,Orphanet:ORPHA272,SNOMED CT:111502003;MedGen:CN517202 Congenital muscular dystrophy-dystroglycanopathy with brain and eye anomalies, type A4;Fukuyama congenital muscular dystrophy;not provided germline;unknown 9 105617967 AAAAATTTAATCTTCTTTTTAGGATGGTATCGACAATGCAACATTATTCCTTATAGCAAAG 397508926 69090 NM_007294.3(BRCA1):c.1969C>T (p.Gln657Ter) BRCA1 Oct 18, 2016 MedGen:C2676676,OMIM:604370 Breast-ovarian cancer, familial 1 germline 17 43093562 AGTGAAGAGATAAAGAAAAAAAAGTACAACCAAATGCCAGTCAGGCACAGCAGAAACCTAC 104894161 31791 NM_000399.4(EGR2):c.1075C>T (p.Arg359Trp) EGR2 May 09, 2017 MedGen:C1843247,OMIM:607678,Orphanet:ORPHA101084;MedGen:C0751036,Orphanet:ORPHA65753,SNOMED CT:398040009;MedGen:C0011195,OMIM:145900,Orphanet:ORPHA64748,SNOMED CT:111499002;MedGen:C4016028;MedGen:CN517202 Charcot-Marie-Tooth disease, demyelinating, type 1d;Charcot-Marie-Tooth disease, type I;Dejerine-Sottas disease;Dejerine-sottas neuropathy, autosomal dominant;not provided germline 10 62813563 CGGCGGTTCTCCCGCTCTGACGAGCTGACACGGCACATCCGAATCCACACTGGGCATAAGC 878852982 236889 NM_018946.3(NANS):c.709C>T (p.Arg237Cys) NANS Jun 20, 2017 MedGen:C1864872,OMIM:610442,Orphanet:ORPHA168454 Spondyloepimetaphyseal dysplasia Genevieve type germline 9 98080921 GCAGTGGCTCTGGGGGCCAAGGTGTTGGAACGTCACATAACTTTGGACAAGACCTGGAAGG 1057516106 353997 NM_172107.3(KCNQ2):c.1051C>T (p.Leu351Phe) KCNQ2 Mar 31, 2016 MedGen:C1852587,OMIM:121200 Benign familial neonatal seizures 1 germline 20 63433876 CAGTCGGCCTGGAGATTCTACGCCACCAACCTCTCGCGCACAGACCTGCACTCCACGTGGC 746488412 48331 NM_001271885.1(AAGAB):c.154C>T (p.Arg52Ter) AAGAB Nov 01, 2012 Gene:619540,MedGen:C1835662,OMIM:148600 Keratosis palmoplantaris papulosa germline 15 67231868 GATGACTTCCCAGAATCTACAGGAGTAAAGCGAATTGTCCAAGCCCTGAATGCCAATGTGT 786202918 183044 NM_000314.6(PTEN):c.733C>T (p.Gln245Ter) PTEN Mar 01, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1959582,OMIM:601728,Orphanet:ORPHA306498 Hereditary cancer-predisposing syndrome;PTEN hamartoma tumor syndrome germline;unknown 10 87957951 GAAGACAAGTTCATGTACTTTGAGTTCCCTCAGCCGTTACCTGTGTGTGGTGATATCAAAG -1 446003 NM_176787.4(PIGN):c.661C>T (p.Arg221Ter) PIGN Jul 27, 2017 MedGen:CN517202 not provided germline 18 62148227 TTAGGAATAGATACAAACGGACATGCTCATCGACCATCCTCGAGGTAATTTAATATTGTGT 780302064 427654 NM_170707.3(LMNA):c.1588C>T (p.Leu530Phe) LMNA Feb 08, 2013 MeSH:D009136,MedGen:C0026850,Orphanet:ORPHA98473 Muscular dystrophy germline 1 156137212 TGGGGCTGCGGGAACAGCCTGCGTACGGCTCTCATCAACTCCACTGGGGAAGTAAGTAGGC 144547521 36745 NM_003060.3(SLC22A5):c.1193C>T (p.Pro398Leu) SLC22A5 Dec 30, 2015 MedGen:C0342788,OMIM:212140,Orphanet:ORPHA158,SNOMED CT:21764004;MedGen:CN517202 Renal carnitine transport defect;not provided germline;unknown 5 132390830 TGTTGGCCTGGCTGCTGCTGCAATATTTGCCCCGGCGCTATTCCATGGCCACTGCCCTCTT 886039269 259374 NM_001242896.1(DEPDC5):c.3994C>T (p.Arg1332Ter) DEPDC5 Apr 13, 2016 Gene:50987,MedGen:C1858477,OMIM:604364 Epilepsy, familial focal, with variable foci 1 germline 22 31879713 TCCTATGCAAGTAGGCACAGCTCCTTTAGCCGAAGTTTTGGAGGACGGAGCCAGGCGGCAG 869025316 223700 NM_032504.1(UNC80):c.5098C>T (p.Pro1700Ser) UNC80 Mar 29, 2016 MedGen:C4225203,OMIM:616801 Hypotonia, infantile, with psychomotor retardation and characteristic facies 2 germline 2 209918616 TCCGTCCCAATGTTTGACCCACCGTGGGTTCCTCAGTGCAGCGGGAGTGTCCAGGACCCCA 367757240 485716 NM_001252634.1(THRB):c.1312C>T (p.Arg438Cys) THRB Jan 28, 2014 MedGen:C2937288,OMIM:188570 Thyroid hormone resistance, generalized, autosomal dominant germline 3 24122958 CTGCGGATGATAGGAGCCTGCCATGCCAGCCGCTTCCTGCACATGAAGGTGGAATGCCCCA 886041186 264158 NM_000094.3(COL7A1):c.553C>T (p.Arg185Ter) COL7A1 Nov 17, 2016 MedGen:CN517202 not provided germline 3 48593231 ATCAAGAATGCTGACCCTGAGGAGCTGAAGCGAGTTGCCTCACAGCCCACCAGTGACTTCT 151344513 46948 NM_006796.2(AFG3L2):c.1961C>T (p.Thr654Ile) AFG3L2 May 17, 2011 MedGen:C1853249,OMIM:610246,Orphanet:ORPHA101109 Spinocerebellar ataxia 28 germline 18 12340220 CTGGTGCTCAAGATGACTTGAGAAAAGTAACTCAGAGTGCATATGCCCAAGTGAGTATATG 756898971 224974 NM_015073.2(SIPA1L3):c.4489C>T (p.Arg1497Ter) SIPA1L3 Jan 27, 2017 MedGen:C4225182,OMIM:616851 Cataract 45 germline 19 38192203 TTTGGGCAACCGAGGTTGAGGGCATCCCTCCGAGACCTCCGGTCACCACGGAAGAACTACA 116840773 23321 NM_033337.2(CAV3):c.137C>T (p.Ala46Val) CAV3 Jan 25, 2016 MedGen:C3280443,OMIM:614321;MedGen:C1832560;MedGen:CN517202 Distal myopathy, Tateyama type;Rippling muscle disease 2;not provided germline 3 8745548 CCCTGCAGGTGGATTTTGAAGACGTGATCGCAGAGCCTGTGGGCACCTACAGCTTTGACGG 63750951 96269 NM_000251.2(MSH2):c.181C>T (p.Gln61Ter) MSH2 Feb 17, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0009405,Orphanet:ORPHA443090;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Hereditary nonpolyposis colon cancer;Lynch syndrome;not provided germline;unknown 2 47403372 CTGCTGGCCGCCCGGGAGGTGTTCAAGACCCAGGGGGTGATCAAGTACATGGGGCCGGCAG 387907316 45898 NM_006282.3(STK4):c.349C>T (p.Arg117Ter) STK4 Apr 12, 2012 MedGen:C3553943,OMIM:614868,Orphanet:ORPHA314689 T-cell immunodeficiency, recurrent infections, and autoimmunity with or without cardiac malformations germline 20 44981932 GCTGGTTCTGTATCTGATATCATTCGATTACGAAATAAAACGGTAGGTTTACCTTCTAGAA 28931573 32948 NM_000039.2(APOA1):c.589C>T (p.Arg197Cys) APOA1 Nov 05, 2003 na APOLIPOPROTEIN A-I (MILANO) germline 11 116836023 CTGGCCCCCTACAGCGACGAGCTGCGCCAGCGCTTGGCCGCGCGCCTTGAGGCTCTCAAGG 121434230 18461 NM_006147.3(IRF6):c.1186C>T (p.Pro396Ser) IRF6 Jan 01, 2003 MedGen:C0175697,OMIM:119300,SNOMED CT:79261008 Van der Woude syndrome germline 1 209788638 ACCTGTGTTCTGTGTCCTGAACAGGTCATTCCAGTAGTGGCTCGGATGATCTACGAGATGT 574660186 178478 NM_001267550.2(TTN):c.67495C>T (p.Arg22499Ter) TTN Jun 06, 2017 MedGen:C1858763,OMIM:604145;MedGen:C1838244,OMIM:600334,Orphanet:ORPHA609;MedGen:C1861065,OMIM:613765;MedGen:C1863599,OMIM:603689,Orphanet:ORPHA178464;MedGen:C1837342,OMIM:608807,Orphanet:ORPHA140922;MedGen:C2673677,OMIM:611705,Orphanet:ORPHA289377;EFO:EFO_0000407,Human Phenotype Ontology:HP:0001644,MedGen:C0007193,Orphanet:ORPHA217604,SNOMED CT:195021004;MedGen:CN517202 Dilated cardiomyopathy 1G;Distal myopathy Markesbery-Griggs type;Familial hypertrophic cardiomyopathy 9;Hereditary myopathy with early respiratory failure;Limb-girdle muscular dystrophy, type 2J;Myopathy, early-onset, with fatal cardiomyopathy;Primary dilated cardiomyopathy;not provided germline 2 178579702 GATTTCCTGACTGAAGAAAATAAGTGGCAACGAGTTATGAAATCCTTAAGCCTACAGTACT 879253815 214551 NM_000532.4(PCCB):c.493C>T (p.Arg165Trp) PCCB - Human Phenotype Ontology:HP:0003353,MedGen:C0268579,OMIM:606054,Orphanet:ORPHA35 Propionic acidemia germline 3 136262015 GTGATTGGGCTGAATGACTCTGGGGGAGCACGGATCCAAGAAGGAGTGGAGTCTTTGGCTG 113994128 16145 NM_000642.2(AGL):c.1222C>T (p.Arg408Ter) AGL Sep 06, 2012 MedGen:C1968739;MedGen:C0017922,OMIM:232400,Orphanet:ORPHA308684,SNOMED CT:66937008 Glycogen storage disease IIIa;Glycogen storage disease type III germline 1 99875394 AATTGCCTTTTGGGAAATGTGTTTTATGAACGACTGGCTGGCCATGGTCCAAAACTAGGAC 281865548 39932 NM_018081.2(WRAP53):c.1192C>T (p.Arg398Trp) WRAP53 May 10, 2012 MedGen:C3151442,OMIM:613988 Dyskeratosis congenita, autosomal recessive, 3 germline 17 7702770 CAGGATGCTGAGCTCCTGTGCTGGGATCTCCGGCAGTCTGGTTACCCACTGTGGTCCCTGG 104894715 19828 NM_181882.2(PRX):c.1102C>T (p.Arg368Ter) PRX Feb 01, 2001 MedGen:CN069172 Autosomal recessive Dejerine-Sottas syndrome germline 19 40397250 CCCCGCCTTAGTTTTCCCCGATTTGGGGCTCGAGCAAAGGAAGTTGCTGAGGCCAAGGTAG 104894814 25474 NM_000166.5(GJB1):c.658C>T (p.Arg220Ter) GJB1 Mar 22, 2017 MedGen:CN118851;MedGen:C0393808,OMIM:302800,Orphanet:ORPHA101075,SNOMED CT:230552007;MedGen:CN517202 Charcot-Marie-Tooth Neuropathy X;X-linked hereditary motor and sensory neuropathy;not provided germline X 71224365 GTGTACCTCATCATCCGGGCCTGTGCCCGCCGAGCCCAGCGCCGCTCCAATCCACCTTCCC 1085307463 415696 NM_172107.3(KCNQ2):c.1093C>T (p.Arg365Ter) KCNQ2 May 02, 2017 MedGen:CN517202 not provided germline 20 63433834 GACCTGCACTCCACGTGGCAGTACTACGAGCGAACGGTCACCGTGCCCATGTACAGGTACC 587783227 167644 NM_018136.4(ASPM):c.2791C>T (p.Arg931Ter) ASPM Jan 12, 2018 MedGen:C1837501,OMIM:608716;MedGen:CN517202 Primary autosomal recessive microcephaly 5;not provided germline 1 197128635 GCTAGTAAAGAAATCCTTTTGGCTTTTTCACGAGATTTCCTAAGTGGTGAAGGTGACCTTT 121912604 17388 NM_016341.3(PLCE1):c.5560C>T (p.Gln1854Ter) PLCE1 Dec 01, 2006 MedGen:C1853124,OMIM:610725 Nephrotic syndrome, type 3 germline 10 94304583 GTTCTGTGGGACAAGAACTGCCCCATGTATCAGAAGTTTTCTCCACTAGAAAGAGATCTGG 137853293 28112 NM_000321.2(RB1):c.2359C>T (p.Arg787Ter) RB1 Mar 07, 2017 MedGen:C0027672,SNOMED CT:699346009;Human Phenotype Ontology:HP:0009919,MeSH:D012175,MedGen:C0035335,OMIM:180200,Orphanet:ORPHA790 Hereditary cancer-predisposing syndrome;Retinoblastoma germline;somatic 13 48465238 CCTACCTTGTCACCAATACCTCACATTCCTCGAAGCCCTTACAAGTTTCCTAGTTCACCCT 760714959 205533 NM_000494.3(COL17A1):c.3156C>T (p.Gly1052=) COL17A1 Apr 01, 2015 MedGen:C1852551,OMIM:122400,Orphanet:ORPHA293381 Epithelial recurrent erosion dystrophy germline 10 104037688 TCCCCCAGGACCTGTCACCACCATCACAGGCGAGACTTTCGACTACTCAGAGCTGGCAAGC 886042935 268970 NM_000321.2(RB1):c.2548C>T (p.Gln850Ter) RB1 Nov 25, 2015 Human Phenotype Ontology:HP:0009919,MeSH:D012175,MedGen:C0035335,OMIM:180200,Orphanet:ORPHA790 Retinoblastoma germline 13 48476728 TAGACTTCTGAGAAGTTCCAGAAAATAAATCAGATGGTATGTAACAGCGACCGTGTGCTCA 794728060 196821 NM_000090.3(COL3A1):c.4087C>T (p.Arg1363Ter) COL3A1 Aug 10, 2016 MedGen:CN517202 not provided germline 2 189010723 CATCTGGCATTCCTTCGACTTCTCTCCAGCCGAGCTTCCCAGAACATCACATATCACTGCA 121434219 18068 NM_000051.3(ATM):c.9139C>T (p.Arg3047Ter) ATM Oct 10, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C4017102;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Ataxia-telangiectasia syndrome;Ataxia-telangiectasia without immunodeficiency;Hereditary cancer-predisposing syndrome;not provided germline 11 108365476 CAGCAGGCCATAGACCCCAAAAATCTCAGCCGACTTTTCCCAGGATGGAAAGCTTGGGTGT -1 444924 NM_015335.4(MED13L):c.6418C>T (p.Gln2140Ter) MED13L Oct 16, 2017 MedGen:CN517202 not provided germline 12 115963489 GCTTCGCTGCATCACCACATTTCAGTAGCACAGACAGACGAACTTCTGCCTGCCAGGAATT 1060502788 401810 NM_024675.3(PALB2):c.1048C>T (p.Gln350Ter) PALB2 May 22, 2017 MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:CN517202 Familial cancer of breast;not provided germline 16 23635498 AATGAAAACCAAAACTTAAAAGAACAAAATCAAACAGAGAAATCTTTAAAATCTCCCAGTG 387907120 40096 NM_174917.4(ACSF3):c.1073C>T (p.Thr358Ile) ACSF3 Aug 14, 2011 MedGen:C3280314,OMIM:614265,Orphanet:ORPHA289504 Combined malonic and methylmalonic aciduria germline 16 89114434 GCCACACCCTGCTGGAGCGGTATGGCATGACCGAGATCGGCATGGCTCTGTCCGGGCCCCT 770505620 443610 NM_000128.3(F11):c.841C>T (p.Gln281Ter) F11 Oct 27, 2017 MedGen:CN517202 not provided germline 4 186280097 AAGAGCAAAGCTCTTTCTGGTTTCAGTCTACAAAGCTGCAGGCACAGCATCCCAGGTAAAC 137886900 47595 NM_004614.4(TK2):c.547C>T (p.Arg183Trp) TK2 Dec 06, 2012 MedGen:C3149750,OMIM:609560;MedGen:C4310734,OMIM:617069 Mitochondrial DNA depletion syndrome 2;Progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal recessive 3 germline 16 66517207 CCACGTATTCTTTTAACCTCAGTTTACCTTCGGACCAATCCTGAGACTTGTTACCAGAGGT 137852544 24971 NM_002764.3(PRPS1):c.569C>T (p.Ala190Val) PRPS1 Feb 21, 2017 MedGen:C1970827,OMIM:300661,Orphanet:ORPHA3222 Phosphoribosylpyrophosphate synthetase superactivity germline X 107645215 CCATTGCAGACAGGCTGAATGTGGACTTTGCCTTGATTCACAAAGAACGGAAGAAGGCCAA 150115958 188766 NM_145200.3(CABP4):c.646C>T (p.Arg216Ter) CABP4 Oct 01, 2013 MedGen:C1864877,OMIM:610427 Congenital stationary night blindness, type 2B germline 11 67457677 CTGGGGGTGCGAGAGCTGCGCATCGCCTTCCGAGAGGTGCGGAGTGTGGTGAGGTGGGCAG 267607157 27694 NM_001256850.1(TTN):c.2228C>T (p.Ala743Val) TTN Feb 22, 2002 MedGen:C1858763,OMIM:604145 Dilated cardiomyopathy 1G germline 2 178785990 TGGAGTACGGATATAAGGAACGCATTTCCGCCGCAAAGGTAGCTGAGCCTCCCCAACGTCC 121913116 31397 NM_000142.4(FGFR3):c.251C>T (p.Ser84Leu) FGFR3 Sep 26, 2013 MedGen:C0410529,OMIM:146000,Orphanet:ORPHA429,SNOMED CT:205468002 Hypochondroplasia germline 4 1799395 GGGTCAAGGATGGCACAGGGCTGGTGCCCTCGGAGCGTGTCCTGGTGGGGCCCCAGCGGCT 118203909 15690 NM_000130.4(F5):c.3481C>T (p.Arg1161Ter) F5 Sep 01, 2001 MedGen:C0015499,OMIM:227400,Orphanet:ORPHA326,SNOMED CT:4320005 Factor V deficiency germline 1 169541609 CCAGAGCTCAGTGAAATGCTTGAGTATGACCGAAGTCACAAGTCCTTCCCCACAGATATAA 866445127 235823 NM_001042492.2(NF1):c.7549C>T (p.Arg2517Ter) NF1 Feb 01, 2018 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003;MedGen:CN517202;MedGen:CN169374 Hereditary cancer-predisposing syndrome;Neurofibromatosis, type 1;not provided;not specified germline 17 31352348 ACCTATCCAACTGTCGGCCAGACCAGTCCCCGAGCCAGGAAATCCATGAGCCTGGACATGG 397514532 48144 NM_001139.2(ALOX12B):c.1642C>T (p.Arg548Trp) ALOX12B May 15, 2015 MedGen:C1855792,OMIM:242100;MedGen:CN517202 Autosomal recessive congenital ichthyosis 2;not provided germline 17 8075607 CAGGAAATATTTAAAGAGTGCCTCCTGGGGCGGGAGAGCTCAGGTATGGGCCTGGACACCT 387907024 39784 NM_018238.3(AGK):c.517C>T (p.Gln173Ter) AGK Feb 10, 2012 MedGen:C1859317,OMIM:212350,Orphanet:ORPHA1369 Cataract and cardiomyopathy germline 7 141615564 ACCCTCTTTGCCGAAAGTGGAAACAAAGTCCAGTAGGTTGTCAATGTGGGGAATTAGCATT -1 442110 NM_000435.2(NOTCH3):c.3226C>T (p.Arg1076Cys) NOTCH3 Jun 15, 2016 MedGen:CN517202 not provided germline 19 15180173 AGCTCCCACTACTGCGTGTGCCCAGAGGGCCGTACTGGTAGCCACTGTGAGCAGGAGGTGG 758316679 431811 NM_015600.4(ABHD12):c.193C>T (p.Arg65Ter) ABHD12 Jan 01, 2015 Human Phenotype Ontology:HP:0000556,MedGen:C0854723,Orphanet:ORPHA71862,SNOMED CT:314407005 Retinal dystrophy unknown 20 25339350 CTGACCTATTCATTGCTTTTCTCTTGCAGGCGAAAGGGCGTGTGGTTGCGCCTGAGGAAGA 137852272 25679 NM_000133.3(F9):c.484C>T (p.Arg162Ter) F9 Jul 01, 1990 MedGen:C0008533,OMIM:306900,Orphanet:ORPHA98879,SNOMED CT:41788008 Hereditary factor IX deficiency disease germline X 139548455 AAGGTGGTTTGCTCCTGTACTGAGGGATATCGACTTGCAGAAAACCAGAAGTCCTGTGAAC 199476084 23269 NM_004329.2(BMPR1A):c.715C>T (p.Gln239Ter) BMPR1A Jun 01, 2001 MedGen:C0345893,OMIM:174900,Orphanet:ORPHA329971,SNOMED CT:9273005 Juvenile polyposis syndrome germline 10 86917173 ACTATTGCCAAACAGATTCAGATGGTCCGGCAAGTTGGTAAAGGCCGATATGGAGAAGTAT 565203731 358141 NM_014363.5(SACS):c.11374C>T (p.Arg3792Ter) SACS Feb 23, 2017 MedGen:C1849140,OMIM:270550,Orphanet:ORPHA98 Spastic ataxia Charlevoix-Saguenay type germline;unknown 13 23332502 GCAGAAAAAAGGGAATTTCGTTTTCAGTTGCGAGGGGTTGCTTTTGTGATGGTAGAAGATG 1060501181 404297 NM_000328.2(RPGR):c.1366C>T (p.Gln456Ter) RPGR Aug 02, 2016 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244 Ciliary dyskinesia germline X 38297332 GTCTTTCCACGATGTTCTGAGAGAAACCTCCAAGAGAGTGTCTTATCTGAACAGGACCTCA 397514558 48266 NM_000138.4(FBN1):c.2920C>T (p.Arg974Cys) FBN1 Feb 17, 2017 MedGen:C1851286,OMIM:129600;MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:CN118826,Orphanet:ORPHA91387 Ectopia lentis, isolated, autosomal dominant;Marfan syndrome;Marfan syndrome;Thoracic aortic aneurysm and aortic dissection germline 15 48490013 GACGAGGAGTGCACCCTGCCTATTGCTGGCCGCCACCGCATGGACGCCTGCTGCTGCTCCG 606231299 167927 NM_003051.3(SLC16A1):c.937C>T (p.Arg313Ter) SLC16A1 Nov 25, 2014 MedGen:C4016683 Monocarboxylate transporter 1 deficiency, autosomal recessive germline 1 112917469 TCCATTCTGGCTTTTGTTGACATGGTAGCCCGACCATCTATGGGACTTGTAGCCAACACAA 797044824 204290 NM_020533.2(MCOLN1):c.514C>T (p.Arg172Ter) MCOLN1 Jul 13, 2017 MedGen:C0238286,OMIM:252650,Orphanet:ORPHA578,SNOMED CT:111384001 Mucolipidosis type IV germline;unknown 19 7526869 GGGCTTGCTCTCTGCCAGCGGTACTACCACCGAGGCCACGTGGACCCGGCCAACGACACAT 886041518 264789 NM_004380.2(CREBBP):c.6241C>T (p.Gln2081Ter) CREBBP Feb 09, 2016 MedGen:CN517202 not provided germline 16 3728806 CTGCGGACCCTGAAGTCGCCCAGCTCCCCTCAGCAGCAACAGCAGGTGCTGAACATTCTCA 137852856 17696 NM_198428.2(BBS9):c.1792C>T (p.Arg598Ter) BBS9 Dec 01, 2005 MedGen:C1859567,OMIM:615986 Bardet-Biedl syndrome 9 germline 7 33383668 GCATTTTTCCTTAATTTTTTTCTCTCAGAACGATATCGCATTCAGAGTGAACAATTTGAAG 864309572 215572 NM_001256214.1(ATP1A3):c.1006C>T (p.Pro336Ser) ATP1A3 May 05, 2015 MedGen:CN517202 not provided unknown 19 41984944 TTCCTCATCGGCATCATCGTGGCCAATGTCCCAGAGGGTCTGCTGGCCACTGTCACTGTAA 121918579 28142 NM_000283.3(PDE6B):c.892C>T (p.Gln298Ter) PDE6B Jan 01, 2015 Human Phenotype Ontology:HP:0000547,MeSH:D012174,MedGen:C0035334,OMIM:268000,Orphanet:ORPHA791,SNOMED CT:28835009;MedGen:C3151107,OMIM:613801 Retinitis pigmentosa;Retinitis pigmentosa 40 germline;unknown 4 654119 GACGTGTGGTCTGTGCTGATGGGAGAGTCCCAGCCGTACTCGGGCCCACGCACGCCTGATG 757075712 222997 NM_003201.2(TFAM):c.533C>T (p.Pro178Leu) TFAM Oct 17, 2016 MedGen:C4310690,OMIM:617156;MedGen:CN069134,Orphanet:ORPHA254871 Mitochondrial DNA depletion syndrome 15 (hepatocerebral type);Mitochondrial DNA depletion syndrome, hepatocerebral form germline;inherited 10 58390856 AAAGATTCCAAGAAGCTAAGGGTGATTCACCGCAGGTAAAGCTGAAATATATTTTTGTTTA 267606789 31578 NM_000129.3(F13A1):c.1984C>T (p.Arg662Ter) F13A1 Jul 15, 1994 Human Phenotype Ontology:HP:0040233,MedGen:C2750514,OMIM:613225 Factor xiii, a subunit, deficiency of germline 6 6151874 GAGTTTACCAATCCTTTAAAAGAAACCCTGCGAAATGTCTGGGTACACCTGGATGGTCCTG 137852973 19583 NM_032667.6(BSCL2):c.269C>T (p.Ser90Leu) BSCL2 Oct 23, 2017 MedGen:CN043576;MedGen:C2931276,Orphanet:ORPHA100998;MedGen:CN074197,OMIM:270685;MedGen:CN517202 Charcot-Marie-Tooth disease, type 2;Silver spastic paraplegia syndrome;Spastic paraplegia 17;not provided germline 11 62702493 CACTCTGCTCCTTCCCTGTTGCCAATGTCTCGCTGACTAAGGGTGGACGTGATCGGGTGAG 1131690986 420494 NM_000264.4(PTCH1):c.403C>T (p.Arg135Ter) PTCH1 Nov 19, 2015 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 9 95485866 TAAACCTGTACATATTTGTCAGTTGGAGGACGAGTAAGTCGTGAATTAAATTATACTCGCC -1 481417 NM_139242.3(MTFMT):c.91C>T (p.Arg31Ter) MTFMT Nov 08, 2017 MedGen:C3554182,OMIM:614947,Orphanet:ORPHA319524 Combined oxidative phosphorylation deficiency 15 germline 15 65029523 AGGCCGAGTCCCCAGTGGCGAGCACTGGCCCGACTCGGCTGGGAGGACTGCCGGGACTCCA 75239284 427276 NM_000038.5(APC):c.2995C>T (p.Gln999Ter) APC - MedGen:CN240755 Familial adenomatous polyposis germline 5 112838589 GATGATGAAAGTAAGTTTTGCAGTTATGGTCAATACCCAGCCGACCTAGCCCATAAAATAC 121912488 29569 NM_002292.3(LAMB2):c.736C>T (p.Arg246Trp) LAMB2 Nov 01, 2004 MedGen:C1836876,OMIM:609049,Orphanet:ORPHA2670 Pierson syndrome germline 3 49131129 GCCTCAGACCTGTTGAAGATCACCAACCTACGGGTGAACCTGACTCGTCTACACACGTTGG 137852293 25572 NM_000292.2(PHKA2):c.3341C>T (p.Thr1114Ile) PHKA2 Jul 24, 2017 MedGen:C2748941;MedGen:C0017927,OMIM:306000 Glycogen storage disease IXa2;Glycogen storage disease type IXa1 germline X 18894400 TGGTTGCCTGCCTGTCCCTTTGGTAGATGACCCCGCATGAGATCAAGTTTGCTGTCCATGT 28935475 26481 NM_001037811.2(HSD17B10):c.388C>T (p.Arg130Cys) HSD17B10 Oct 25, 2017 MedGen:C1845517,OMIM:300438,Orphanet:ORPHA391417 2-methyl-3-hydroxybutyric aciduria germline X 53432086 GTGAATCTCATGGGCACCTTCAATGTGATCCGCCTGGTGGCTGGTGAGATGGGCCAGAATG 1057519629 362598 NM_001199107.1(TBC1D24):c.1078C>T (p.Arg360Cys) TBC1D24 Jan 10, 2017 Human Phenotype Ontology:HP:0001300,MedGen:C0242422,Orphanet:ORPHA68402 Parkinsonism germline 16 2498332 ATGAGAGACATCTGGTCCTGGGTCCCCGAGCGCTTTGCCCTGTGCCAGCCCCTTCTGCTGT 587781239 165796 NM_130838.1(UBE3A):c.2480C>T (p.Pro827Leu) UBE3A Feb 14, 2014 MedGen:C0162635,OMIM:105830,Orphanet:ORPHA72,SNOMED CT:76880004 Angelman syndrome de novo 15 25339216 CTCATACTTGCTTTAATGTGCTTTTACTTCCGGAATACTCAAGCAAAGAAAAACTTAAAGA 797045332 209220 NM_000052.6(ATP7A):c.1639C>T (p.Arg547Ter) ATP7A Feb 08, 2013 MedGen:C0022716,OMIM:309400,Orphanet:ORPHA565,SNOMED CT:59178007 Menkes kinky-hair syndrome germline X 78003168 ATACAACCCCCAATGATAGCAGAGTTCATCCGAGAACTTGGATTTGGAGCCACTGTGATAG 398124072 100707 NM_004006.2(DMD):c.8443C>T (p.Gln2815Ter) DMD Apr 09, 2013 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Duchenne muscular dystrophy germline X 31496892 GACCAGTGGAAGCGTCTGCACCTTTCTCTGCAGGAACTTCTGGTGTGGCTACAGCTGAAAG 886041986 264815 NM_001258221.1(KCTD1):c.97C>T (p.His33Tyr) KCTD1 Sep 20, 2016 MedGen:CN517202 not provided germline 18 26501139 GCACAACTCACAAAATCCAATGCGCCTGTCCACATTGATGTGGGCGGCCACATGTACACCA 863225023 213814 NM_001540.4(HSPB1):c.523C>T (p.Gln175Ter) HSPB1 Jun 07, 2017 MedGen:C1847823,OMIM:606595,Orphanet:ORPHA99940;MedGen:CN517202 Charcot-Marie-Tooth disease type 2F;not provided germline 7 76304078 GTGGAGGCCCCCATGCCCAAGCTAGCCACGCAGTCCAACGAGATCACCATCCCAGTCACCT 794728231 197686 NM_000138.4(FBN1):c.4888C>T (p.Gln1630Ter) FBN1 Apr 01, 2014 MedGen:CN517202 not provided germline 15 48465622 GGAAAATGTATCAACACCTTTGGGAGTTTCCAGTGCCGCTGTCCAACCGGCTACTACCTGA 199939108 177037 NM_006363.5(SEC23B):c.1648C>T (p.Arg550Ter) SEC23B Jan 23, 2014 MedGen:CN517202 not provided germline 20 18543155 GAGGGGCCCGATGTGCTCCGGTGGCTGGACCGACAACTCATCCGACTGGTAAATTGGGGAC 786204931 187352 NM_000314.6(PTEN):c.367C>T (p.His123Tyr) PTEN Jun 28, 2017 MedGen:C1959582,OMIM:601728,Orphanet:ORPHA306498;MedGen:CN517202 PTEN hamartoma tumor syndrome;not provided germline 10 87933126 AGTGAAGATGACAATCATGTTGCAGCAATTCACTGTAAAGCTGGAAAGGGACGAACTGGTG 587784148 168221 NM_022455.4(NSD1):c.5431C>T (p.Arg1811Ter) NSD1 Feb 08, 2013 MedGen:CN035106,OMIM:117550 Sotos syndrome 1 germline 5 177269729 TCTAATGACTATTTGTGGACTCACCAGGCCCGAGTCTTCCCTTACATGGAGGGTGACGTGA 200708870 402521 NM_023036.4(DNAI2):c.883C>T (p.Arg295Ter) DNAI2 Jun 18, 2016 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244 Ciliary dyskinesia germline 17 74301064 TCCTCCCACCAGGTCATGTGGTGGGACATCCGAAAGATGAGCGAGCCCACTGAAGTTGTGA 17860424 22799 NM_001228.4(CASP8):c.793C>T (p.Arg265Trp) CASP8 Sep 26, 2002 MedGen:C1846545,OMIM:607271,Orphanet:ORPHA275517 Caspase-8 deficiency germline 2 201276908 ATCATCAACAATCACAATTTTGCAAAAGCACGGGAGAAAGTGCCCAAACTTCACAGCATTA 121912795 32592 NM_001822.5(CHN1):c.668C>T (p.Ala223Val) CHN1 Aug 08, 2008 MedGen:C0751083,OMIM:604356 Duane syndrome type 2 germline 2 174824478 TCAGAGGGCCACACTGGTGTGAATACTGTGCCAACTTTATGTGGGGTCTCATTGCTCAGGG 104894358 28530 NM_000217.2(KCNA1):c.1249C>T (p.Arg417Ter) KCNA1 Aug 16, 2012 MedGen:C1719788,OMIM:160120,Orphanet:ORPHA37612,SNOMED CT:421182009 Episodic ataxia type 1 germline 12 4912627 ATTGTGTCCAATTTCAACTATTTCTACCACCGAGAAACTGAGGGGGAAGAGCAGGCTCAGT 119103216 16972 NM_020166.4(MCCC1):c.1604C>T (p.Ser535Phe) MCCC1 Jun 01, 2001 MedGen:CN028786,OMIM:210200 3 Methylcrotonyl-CoA carboxylase 1 deficiency germline 3 183034068 TGAATTTTAAATTTTTTCTAGATCAATTCTCTCCATTTTCGTCTAGCAGTGGAAGAAGACT 121964963 15157 NM_000071.2(CBS):c.434C>T (p.Pro145Leu) CBS Jun 01, 1993 MedGen:CN068394 Homocystinuria, pyridoxine-responsive germline 21 43066260 CGCTGAAGCCCGGGGACACGATTATCGAGCCGACATCCGGGAACACCGGTGGGTGCCAGGC 1057519283 361780 NM_014727.2(KMT2B):c.1690C>T (p.Arg564Ter) KMT2B Feb 01, 2017 MedGen:C4310633,OMIM:617284 Dystonia 28, childhood-onset germline 19 35721037 CCCCCAAAGGTGGAGGTCTCACCTGTCCTGCGACCTCCCATTACCACCTCCCCACCTGTTC 724159948 171868 NM_001396.3(DYRK1A):c.763C>T (p.Arg255Ter) DYRK1A Jun 30, 2016 MedGen:C3276611;Human Phenotype Ontology:HP:0000490,MedGen:C0014306;Human Phenotype Ontology:HP:0011968,MedGen:C0232466;Human Phenotype Ontology:HP:0001249,MedGen:C1843367;MedGen:C3279839,OMIM:614104,Orphanet:ORPHA464306;Human Phenotype Ontology:HP:0000252,MedGen:C0424688;Human Phenotype Ontology:HP:0001250,MedGen:C0036572 Absent or delayed speech development;Deeply set eye;Feeding difficulties;Intellectual disability;Mental retardation, autosomal dominant 7;Microcephaly;Seizures de novo;germline 21 37490273 CTCTATGACTTGCTGAGAAACACCAATTTCCGAGGGGTCTCTTTGAACCTAACACGAAAGT 121913375 48858 NM_004333.4(BRAF):c.1796C>T (p.Thr599Ile) BRAF May 13, 2016 Human Phenotype Ontology:HP:0002861,MeSH:D008545,MedGen:C0025202,SNOMED CT:2092003;MeSH:D009369,MedGen:C0027651,SNOMED CT:108369006;MedGen:CN517202 Malignant melanoma;Neoplasm;not provided germline;somatic 7 140753339 CAGTAAAAATAGGTGATTTTGGTCTAGCTACAGTGAAATCTCGATGGAGTGGGTCCCATCA 863224979 213882 NM_004006.2(DMD):c.1324C>T (p.Gln442Ter) DMD Dec 16, 2014 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Duchenne muscular dystrophy germline X 32644139 GAATGCCTCAGGGTAGCTAGCATGGAAAAACAAAGCAAGTAAGTCCTTATTTGTTTTTAAT 104894006 31172 NM_000162.3(GCK):c.556C>T (p.Arg186Ter) GCK Apr 13, 2017 MedGen:C4016117;MedGen:CN517202 Diabetes mellitus, noninsulin-dependent, late-onset;not provided germline 7 44149992 GCAGAAGGGAACAATGTCGTGGGGCTTCTGCGAGACGCTATCAAACGGAGAGGGGTGAGGG 72653744 21611 NM_001171.5(ABCC6):c.3490C>T (p.Arg1164Ter) ABCC6 Aug 07, 2017 MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005;MedGen:CN517202 Pseudoxanthoma elasticum;not provided germline 16 16163009 GTAGATGAAAGCCAGAGGATCAGTTTCCCGCGACTGGTGGCTGACAGGTAGGAAGAGCCAG 121917780 27132 NM_000196.3(HSD11B2):c.622C>T (p.Arg208Cys) HSD11B2 Aug 01, 1995 MedGen:C2936861,OMIM:218030 Apparent mineralocorticoid excess germline 16 67436100 GAGCTGACCAAGGGCCTCCTGCCCCTGCTGCGCAGCTCAAGGGGCCGCATCGTGACTGTGG 797045176 205702 NM_001753.4(CAV1):c.424C>T (p.Gln142Ter) CAV1 May 19, 2015 MedGen:C2675861,OMIM:612526 Lipodystrophy, congenital generalized, type 3 de novo 7 116559174 CCATGCATTAAGAGCTTCCTGATTGAGATTCAGTGCATCAGCCGTGTCTATTCCATCTACG 121434376 17323 NM_015046.5(SETX):c.4087C>T (p.Arg1363Ter) SETX Mar 01, 2004 MedGen:C1853761,OMIM:606002 Spinocerebellar ataxia autosomal recessive 1 germline 9 132327511 CAGATCAGACCCAAATCACAAAAAAATAGACGAAGACTTTCTGATTGTGAAAGTACAGATG 886041889 264735 NM_013275.5(ANKRD11):c.7552C>T (p.Gln2518Ter) ANKRD11 Jul 21, 2016 MedGen:CN517202 not provided germline 16 89275110 CAGGAGGCCGTCCGGGGAAAGCTGCGTCTACAGCACAGCATCGAGCGGGTAAGTGGGCTGG 80358683 66327 NM_000059.3(BRCA2):c.4525C>T (p.Gln1509Ter) BRCA2 Sep 08, 2016 MedGen:C2675520,OMIM:612555 Breast-ovarian cancer, familial 2 germline 13 32338880 ACTGGAAATCAACTAGTGACCTTCCAGGGACAACCCGAACGTGATGAAAAGATCAAAGAAC 730882196 181419 NM_000405.4(GM2A):c.164C>T (p.Pro55Leu) GM2A Oct 21, 2016 MedGen:CN228274;MedGen:C0268275,OMIM:272750,Orphanet:ORPHA309246,SNOMED CT:71253000 Neurodegenerative illness progressing to crippling dystonia and death with relentless cerebral atrophy;Tay-Sachs disease, variant AB germline 5 151259837 CTGCGGTGATCAGAAGCCTGACTCTGGAGCCTGACCCCATCATCGTTCCTGGAAATGTGAC 397517255 54810 NM_015404.3(WHRN):c.1267C>T (p.Arg423Ter) WHRN Aug 04, 2010 MedGen:C1568249,OMIM:611383 Usher syndrome, type 2D germline 9 114424483 GTGACCCTGAGCAGCCTGGGGAACCAGACACGAGTGCTGCTGGAGGAGCAGGCTCGGCACC 121908357 19933 NM_003977.3(AIP):c.64C>T (p.Arg22Ter) AIP Jun 21, 2012 MedGen:C0346302,OMIM:102200,Orphanet:ORPHA96256,SNOMED CT:254957009 Somatotroph adenoma germline 11 67483222 GGGATCCAAAAACGTGTGATACAGGAAGGCCGAGGAGAGCTCCCGGACTTTCAAGATGGGA 137853319 26813 NM_001110556.1(FLNA):c.3872C>T (p.Pro1291Leu) FLNA Aug 15, 2007 Gene:2270,MedGen:C1845902,OMIM:300321 FG syndrome 2 germline X 154359839 ACGCCCGGGCTCTGACACAGACCGGAGGGCCGCACGTCAAGGCCCGTGTGGCCAACCCCTC 58064122 31206 NM_002055.4(GFAP):c.715C>T (p.Arg239Cys) GFAP Oct 27, 2017 MedGen:C0270726,OMIM:203450,Orphanet:ORPHA58,SNOMED CT:81854007;MedGen:CN517202 Alexander's disease;not provided germline 17 44913334 CCAGACCTCACCGCAGCCCTGAAAGAGATCCGCACGCAGTATGAGGCAATGGCGTCCAGCA 121909383 23631 NM_000339.2(SLC12A3):c.1046C>T (p.Pro349Leu) SLC12A3 Jan 01, 1996 MedGen:C0268450,OMIM:263800,Orphanet:ORPHA358,SNOMED CT:3188003 Familial hypokalemia-hypomagnesemia germline 16 56872737 CCTTCTTCGGAATGTTCTCCATCTTCTTCCCCTCGGCCACAGGCATCCTGGCAGGGGCCAA 587776991 70467 NM_001142864.3(PIEZO1):c.6380C>T (p.Thr2127Met) PIEZO1 May 09, 2013 Gene:10774,MedGen:C0272051,OMIM:194380,Orphanet:ORPHA3202,SNOMED CT:87994004 Xerocytosis germline 16 88719665 AGCTGCGGGCAGTGATGGACTGGGTGTGGACGGACACCACGCTGTCCCTGTCCAGCTGGAT 606231424 170960 NM_016026.3(RDH11):c.322C>T (p.Arg108Ter) RDH11 Dec 01, 2014 MedGen:C4015242,OMIM:616108,Orphanet:ORPHA436245 Retinal dystrophy, juvenile cataracts, and short stature syndrome germline;maternal 14 67692465 AAACTGGACCTGTCTGATACTAAGTCTATTCGAGCTTTTGCTAAGGGCTTCTTAGCTGGTA 121434494 23074 NM_005535.2(IL12RB1):c.637C>T (p.Arg213Trp) IL12RB1 Apr 18, 2013 MedGen:C4013949,OMIM:614891,Orphanet:ORPHA319552 Immunodeficiency 30 germline 19 18075812 AATGTGGCCCAGGAATTCCAGCTCCGACGACGGCAGCTGGGGAGCCAAGGAAGTTCCTGGA 397516827 49073 NM_002880.3(RAF1):c.776C>T (p.Ser259Phe) RAF1 May 13, 2016 MeSH:D009634,MedGen:C0028326,Orphanet:ORPHA648,SNOMED CT:205824006;MedGen:CN166718,Orphanet:ORPHA98733 Noonan syndrome;Rasopathy germline;somatic 3 12604194 GTTCCCTCTCCCAGAGGCAGAGGTCGACATCCACACCTAATGTCCACATGGTCAGCACCAC -1 488127 NM_201589.3(MAFA):c.191C>T (p.Ser64Phe) MAFA Mar 19, 2018 MedGen:C1578917,OMIM:147630 Islet cell adenomatosis germline 8 143430216 CGCTCAGCACGCCCTGCTCCTCCGTGCCCTCCTCGCCCAGCTTCTGCGCGCCCAGCCCGGG 886040220 261657 NM_007294.3(BRCA1):c.4270C>T (p.Gln1424Ter) BRCA1 Oct 18, 2016 MedGen:C2676676,OMIM:604370 Breast-ovarian cancer, familial 1 germline 17 43082491 CTAGAAGCTGTGTTAGAACAGCATGGGAGCCAGCCTTCTAACAGCTACCCTTCCATCATAA 370167241 206947 NM_004826.3(ECEL1):c.997C>T (p.Arg333Ter) ECEL1 Feb 10, 2017 MedGen:C3554415,OMIM:615065,Orphanet:ORPHA329457;MedGen:CN517202 Arthrogryposis, distal, type 5d;not provided germline 2 232484863 ATCACTGTGTCAGAGCATGACGACCTACGGCGAGATGTCAGCTCCATGTACAACAAGGTGA 121964973 15171 NM_000071.2(CBS):c.572C>T (p.Thr191Met) CBS Jun 05, 2017 Human Phenotype Ontology:HP:0002156,MedGen:C0019880;MedGen:C3150344,OMIM:236200;MedGen:CN068393;MedGen:CN517202 Homocystinuria;Homocystinuria due to CBS deficiency;Homocystinuria, pyridoxine-nonresponsive;not provided germline;unknown 21 43065481 TGCGGGCACTGGGGGCTGAGATTGTGAGGACGCCCACCAATGCCAGGTTCGACTCCCCGGA 875989913 228155 NM_000527.4(LDLR):c.1033C>T (p.Gln345Ter) LDLR Dec 16, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11110744 GGCTACGAGTGCCTGTGCCCCGACGGCTTCCAGCTGGTGGCCCAGCGAAGATGCGAAGGTG 886039413 260001 NM_130799.2(MEN1):c.292C>T (p.Arg98Ter) MEN1 Jul 29, 2016 MedGen:CN517202 not provided germline 11 64809818 GCCCTCTATGCCCGCTTCACCGCCCAGATCCGAGGCGCCGTCGACCTGTCCCTCTATCCTC 397509424 75123 NM_013334.3(GMPPB):c.64C>T (p.Pro22Ser) GMPPB Jul 11, 2013 MedGen:C3714932,OMIM:615352,Orphanet:ORPHA363623 Muscular dystrophy-dystroglycanopathy (limb-girdle), type c, 14 germline 3 49723663 ACGCGGCTACGGCCGCTGACGCTGAGCACCCCGAAGCCACTGGTGGACTTCTGCAATAAGC 62642913 108635 NM_000277.2(PAH):c.929C>T (p.Ser310Phe) PAH Jul 14, 2017 MedGen:C0031485,OMIM:261600,Orphanet:ORPHA716,SNOMED CT:154735006;MedGen:CN517202 Phenylketonuria;not provided germline 12 102846935 TCCCCCAATTACAGGAAATTGGCCTTGCCTCTCTGGGTGCACCTGATGAATACATTGAAAA 121912766 32741 NM_001202.5(BMP4):c.1037C>T (p.Ala346Val) BMP4 Mar 01, 2009 MedGen:C2677434,OMIM:600625 Orofacial cleft 11 germline 14 53950222 ACTGCCATGGGGACTGCCCCTTTCCACTGGCTGACCACCTCAACTCAACCAACCATGCCAT 1057517241 358654 NM_000383.3(AIRE):c.517C>T (p.Gln173Ter) AIRE Oct 25, 2016 MedGen:C0085859,OMIM:240300,Orphanet:ORPHA3453,SNOMED CT:11244009;MedGen:CN517202 Polyglandular autoimmune syndrome, type 1;not provided germline;unknown 21 44287570 CCCAAGAAGCCGGAGAGCAGCGCAGAGCAGCAGCGCCTTCCACTCGGGAACGGTGAGCGGG 118203913 15824 NM_052859.3(RFT1):c.199C>T (p.Arg67Cys) RFT1 Oct 01, 2009 MedGen:C2677590,OMIM:612015,Orphanet:ORPHA244310 Congenital disorder of glycosylation type 1N germline 3 53123791 ACCACCCTCTTCCTGGCCAGAGAGGCCTTCCGCAGAGCATGTCTCAGTGGGGGCACCCAGC 145489194 20004 NM_018136.4(ASPM):c.2389C>T (p.Arg797Ter) ASPM Sep 01, 2009 MedGen:C1837501,OMIM:608716 Primary autosomal recessive microcephaly 5 germline 1 197133380 ATTGAAATTGAAGCTAGGCGGTTAATTGTTCGAAAAGATAGACACCTATGGAAAGATGTGG 132630313 26075 NM_001399.4(EDA):c.466C>T (p.Arg156Cys) EDA May 23, 2017 MedGen:C0162359,OMIM:305100,SNOMED CT:239007005;MedGen:CN517202 Hypohidrotic X-linked ectodermal dysplasia;not provided germline X 69957096 TACTCTGAAGAAGAAAGTAGGCGTGTTCGCCGCAATAAAAGAAGCAAAAGCAATGAAGGAG 118204453 16022 NM_024782.2(NHEJ1):c.532C>T (p.Arg178Ter) NHEJ1 Jul 12, 2017 MedGen:C1969799,OMIM:611291,Orphanet:ORPHA169079;MedGen:CN517202 Severe combined immunodeficiency with microcephaly, growth retardation, and sensitivity to ionizing radiation;not provided germline 2 219146736 TTCTTTTTTCTGATCCTTCTTATTACAGATCGATTGAAGACAGAACCATTTGAAGAAAATT 104893781 28073 NM_000539.3(RHO):c.800C>T (p.Pro267Leu) RHO Oct 01, 1991 MedGen:C3151001,OMIM:613731 Retinitis pigmentosa 4 germline 3 129532636 TGGTCATCGCTTTCCTGATCTGCTGGGTGCCCTACGCCAGCGTGGCATTCTACATCTTCAC 118203914 15441 NM_000353.2(TAT):c.169C>T (p.Arg57Ter) TAT Oct 01, 1992 MedGen:C0268487,OMIM:276600,Orphanet:ORPHA28378 Tyrosinemia type 2 germline 16 71576247 GACATGGCCAAGAAAACTTTCAACCCCATCCGAGCCATTGTGGACAACATGAAGGTGAAAC 587777010 70569 NM_006494.3(ERF):c.1270C>T (p.Gln424Ter) ERF Mar 01, 2013 Human Phenotype Ontology:HP:0004443,MedGen:C1833340,OMIM:600775 Craniosynostosis 4 germline 19 42248842 GGGGCGCTAGCCCCACCGCCCCCGCCACCACAGATCAAGGTGGAGCCCATCTCGGAAGGCG 375323253 188067 NM_001572.3(IRF7):c.1261C>T (p.Gln421Ter) IRF7 Apr 24, 2015 MedGen:C4225358,OMIM:616345 Immunodeficiency 39 germline 11 613094 TCTTCAGAGCTGGTGGAATTCCGGGCACGGCAGCGCCGTGGCTCCCCACGCTATACCATCT 387906650 38741 NM_002382.4(MAX):c.223C>T (p.Arg75Ter) MAX Jun 27, 2017 MedGen:C1708353,Orphanet:ORPHA29072;MedGen:C0027672,SNOMED CT:699346009;MedGen:C3149711 Hereditary Paraganglioma-Pheochromocytoma Syndromes;Hereditary cancer-predisposing syndrome;Pheochromocytoma, susceptibility to germline 14 65077985 GACAAAGCCACAGAATATATCCAGTATATGCGAAGGAAAAACCACACACACCAGCAAGATA 202039305 264592 NM_002693.2(POLG):c.202C>T (p.Gln68Ter) POLG Jun 30, 2016 MedGen:CN517202 not provided germline 15 89333553 CAGCCGCAAGTGCTATCCTCGGAGGGCGGGCAGCTGCGGCACAACCCATTGGACATCCAGA 773643220 442418 NM_004006.2(DMD):c.5851C>T (p.Gln1951Ter) DMD Oct 24, 2016 MedGen:CN517202 not provided germline X 32342171 GCCGCAATGGCAGTGGAGCCAACTCAGATCCAGCTCAGCAAGCGCTGGCGGGAAATTGAGA 121917820 22037 NM_001264.4(CDSN):c.598C>T (p.Gln200Ter) CDSN Jun 01, 2003 MedGen:C1840299,OMIM:146520,Orphanet:ORPHA90368 Hypotrichosis 2 germline 6 31117017 TCCCAGCCTGGACAAAGCTCTTCCTCTTCCCAGACCTTTGGGGTATCCAGCAGTGGCCAAA 121912546 29890 NM_005515.3(MNX1):c.775C>T (p.Gln259Ter) MNX1 Dec 01, 1998 MedGen:C1531773,OMIM:176450,SNOMED CT:413936007 Currarino triad germline 7 157006556 ACCAGCCAGCAGCTGCTGGAGCTGGAGCACCAGTTCAAGCTCAACAAGTACCTGTCGCGGC 1057517701 359371 NM_000350.2(ABCA4):c.3403C>T (p.Gln1135Ter) ABCA4 Aug 04, 2016 MedGen:CN517202 not provided germline 1 94041328 CTCCTTGGGGACCGCATTGCCATCATTGCCCAGGGAAGGCTCTACTGCTCAGGCACCCCAC 111033618 25066 NM_000206.2(IL2RG):c.664C>T (p.Arg222Cys) IL2RG Dec 15, 1997 MedGen:C1706416,OMIM:312863 Combined immunodeficiency, X-linked germline X 71109321 AGTGTGGATGGGCAGAAACGCTACACGTTTCGTGTTCGGAGCCGCTTTAACCCACTCTGTG 727504777 174459 NM_032119.3(ADGRV1):c.12631C>T (p.Arg4211Ter) ADGRV1 Oct 11, 2013 MedGen:C1854237,OMIM:605472 Usher syndrome, type 2C germline 5 90778008 TTTGCTGAAACATCAGGAAAACTGACAATGCGAGACGAACAGTCTGCAGTCATTGTAGTAA 587777879 165481 NM_000166.5(GJB1):c.790C>T (p.Arg264Cys) GJB1 - MedGen:C0393808,OMIM:302800,Orphanet:ORPHA101075,SNOMED CT:230552007 X-linked hereditary motor and sensory neuropathy germline X 71224497 GAGCAGGATGGCTCCCTGAAAGACATACTGCGCCGCAGCCCTGGCACCGGGGCTGGGCTGG 121913595 29220 NM_000530.7(MPZ):c.371C>T (p.Thr124Met) MPZ Feb 09, 2017 MedGen:C0007959,Orphanet:ORPHA166,SNOMED CT:50548001;MedGen:C1843153,OMIM:607736,Orphanet:ORPHA99943;MedGen:C0270912,OMIM:118200,Orphanet:ORPHA101082,SNOMED CT:42986003;MedGen:CN517202 Charcot-Marie-Tooth disease;Charcot-Marie-Tooth disease type 2J;Charcot-Marie-Tooth disease, demyelinating, type 1b;not provided germline 1 161306785 TACACAACCTAGACTACAGTGACAATGGCACGTTCACTTGTGACGTCAAAAACCCTCCAGA -1 485850 NM_000044.4(AR):c.2437C>T (p.Leu813Phe) AR Apr 25, 2016 MedGen:C0039585,OMIM:300068,SNOMED CT:12313004 Androgen resistance syndrome germline X 67721951 CAGGAATTCCTGTGCATGAAAGCACTGCTACTCTTCAGCATTAGTAAGTGCCTAGAAGTGC 606231416 171268 NM_001519.3(BRF1):c.677C>T (p.Ser226Leu) BRF1 Jan 05, 2015 MedGen:C4015495,OMIM:616202,Orphanet:ORPHA444072;MedGen:CN221667 Cerebellofaciodental syndrome;cerebellar-facial-dental syndrome germline 14 105241282 GGGACTGGATGCACACAGGCCGGCGCCCCTCGGGCCTCTGCGGAGCAGGTACAGCGGGCCC 387907237 44234 NM_016098.3(MPC1):c.289C>T (p.Arg97Trp) MPC1 Jul 06, 2012 MedGen:C3553607,OMIM:614741,Orphanet:ORPHA447784 Mitochondrial pyruvate carrier deficiency germline 6 166365990 AATGAAGTAGCCCAGCTCATCCAGGGAGGGCGGCTTATCAAACACGAGTAAGCAGATTTCA 777354267 181497 NM_004064.4(CDKN1B):c.206C>T (p.Pro69Leu) CDKN1B Nov 01, 2010 MedGen:C1970712,OMIM:610755,Orphanet:ORPHA276152 Multiple endocrine neoplasia, type 4 germline 12 12718045 AGTGGAATTTCGATTTTCAGAATCACAAACCCCTAGAGGGCAAGTACGAGTGGCAAGAGGT 121909512 33385 NM_000080.3(CHRNE):c.422C>T (p.Pro141Leu) CHRNE Jul 01, 1996 MedGen:C4225369,OMIM:616324 Myasthenic syndrome, congenital, 4b, fast-channel germline 17 4902010 ACGAGGGCGGCTCCGTGACGTGGCTGCCTCCGGCCATCTACCGCAGCGTCTGCGCAGTGGA 128626241 26286 NM_004006.2(DMD):c.1489C>T (p.Gln497Ter) DMD Nov 01, 1993 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Duchenne muscular dystrophy germline X 32595870 CCTTTAAAACATTTTATCTTTCAGGTGCTTCAAGAAGATCTAGAACAAGAACAAGTCAGGG 72558463 103243 NM_000531.5(OTC):c.904C>T (p.His302Tyr) OTC - MedGen:CN517202 not provided unknown X 38411898 AAAGTTGCTGCCTCTGACTGGACATTTTTACACTGCTTGCCCAGAAAGCCAGAAGAAGTGG 104895530 16628 NM_001127255.1(NLRP7):c.1294C>T (p.Arg432Ter) NLRP7 Aug 01, 2009 MedGen:C2931618,OMIM:231090,Orphanet:ORPHA254685 Hydatidiform mole germline 19 54939525 GGCCTGTGGGCGCAGATGTCCGTGTTCCACCGAGAGGACCTGGAAAGGCTCGGGGTGCAGG 730880294 178839 NM_001145392.1(TSEN2):c.691C>T (p.Gln231Ter) TSEN2 Jun 01, 2013 MedGen:C2676466,OMIM:612389 Pontocerebellar hypoplasia type 2B germline 3 12503644 TGTTGCTGCAAACAAGATGCTCTCATCCTCCAGCGTGGCCTTCATCATGAAGACGGCAGCC 149806989 357620 NM_000466.2(PEX1):c.547C>T (p.Arg183Ter) PEX1 Oct 11, 2016 MedGen:CN168921,OMIM:601539;MedGen:C0043459,OMIM:214100,Orphanet:ORPHA912,SNOMED CT:88469006 Peroxisome biogenesis disorder 1B;Zellweger syndrome unknown 7 92517968 ACCAAACTCCTTATTCAGCCAAAGACACGCCGAGCCAAAGAGAATACATTTTCAAAAGCTG 137852286 25567 NM_000292.2(PHKA2):c.2296C>T (p.Gln766Ter) PHKA2 Jan 01, 1995 MedGen:C0017927,OMIM:306000 Glycogen storage disease type IXa1 germline X 18908865 GGTGACGTGGACTGTGAGAAGCTGGTTGAGCAGCTAAAAGATTGTTCGAACCTACAGGACC 587777396 136563 NM_002641.3(PIGA):c.355C>T (p.Arg119Trp) PIGA Aug 23, 2017 MedGen:C3275508,OMIM:300868,Orphanet:ORPHA300496;MedGen:CN517202 Multiple congenital anomalies-hypotonia-seizures syndrome 2;not provided germline X 15331576 AGTCTGCCATTGCTCAGGTACATATTTGTTCGGGAGAGAGTCACGATAATCCATTCACATA 387906418 24597 m.5545C>T MT-TW Jun 15, 2008 MedGen:C4016630 Encephalocardiomyopathy, mitochondrial germline MT 5545 AATTTAGGTTAAATACAGACCAAGAGCCTTCAAAGCCCTCAGTAAGTTGCAATACTTAATT 121918228 16652 NM_014780.4(CUL7):c.4333C>T (p.Arg1445Ter) CUL7 Jan 23, 2018 MedGen:C1848862,OMIM:273750;MedGen:CN517202 Three M syndrome 1;not provided germline 6 43038949 CACCCTGCCCTTGAGCGAGGCTCACAGAGGCGACTGCAGTGGACGTGGCTGGGCTGGGCTG 397508012 67354 NM_000059.3(BRCA2):c.8821C>T (p.Gln2941Ter) BRCA2 Oct 18, 2016 MedGen:C2675520,OMIM:612555 Breast-ovarian cancer, familial 2 germline 13 32379383 AATCACAGGCAAATGTTGAATGATAAGAAACAAGCTCAGATCCAGTTGGAAATTAGGAAGG 121913305 132295 NM_000321.2(RB1):c.1735C>T (p.Arg579Ter) RB1 Oct 05, 2017 MedGen:C0027672,SNOMED CT:699346009;Human Phenotype Ontology:HP:0009919,MeSH:D012175,MedGen:C0035335,OMIM:180200,Orphanet:ORPHA790;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Retinoblastoma;not provided germline;somatic 13 48453032 TTATTTGATCTTATTAAACAATCAAAGGACCGAGAAGGACCAACTGATCACCTTGAATCTG 587777069 94429 NM_032229.2(SLITRK6):c.1240C>T (p.Gln414Ter) SLITRK6 Nov 24, 2014 MedGen:C1857342,OMIM:221200 Deafness and myopia germline 13 85795269 GAAGGATCGTTTATGAACCTAACGAGATTACAAAAACTCTATCTAAATGGTAACCACCTGA 398122559 96928 NM_000059.3(BRCA2):c.6487C>T (p.Gln2163Ter) BRCA2 Mar 08, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 2;Hereditary cancer-predisposing syndrome;not provided germline 13 32340842 CCATATCTCTCTCAATTTCAACAAGACAAACAACAGTTGGTATTAGGAACCAAAGTGTCAC 587783592 169849 NM_178151.2(DCX):c.907C>T (p.Arg303Ter) DCX May 16, 2017 Human Phenotype Ontology:HP:0002282,MedGen:C0008519;MedGen:CN517202 Heterotopia;not provided germline X 111330943 ACTTCAGCCAAGAGCCCTGGTCCTATGCGCCGAAGCAAGTCTCCAGCTGACTCAGGTAACG 398123513 99288 NM_000709.3(BCKDHA):c.964C>T (p.Gln322Ter) BCKDHA Jan 21, 2013 MedGen:C0024776,OMIM:248600,SNOMED CT:27718001 Maple syrup urine disease germline 19 41422739 GAGGCCCGACGGCGGGCTGTGGCAGAGAACCAGCCCTTCCTCATCGAGGCCATGACCTACA 587783505 169215 NM_004380.2(CREBBP):c.5821C>T (p.Gln1941Ter) CREBBP Oct 10, 2013 MedGen:C0035934,OMIM:180849,Orphanet:ORPHA353277,SNOMED CT:45582004 Rubinstein-Taybi syndrome germline 16 3729226 ACCACGGTGTCCACAGGGAAGCCTACCAGCCAGGTGCCGGCCCCCCCACCCCCGGCCCAGC 587777591 152756 NM_020745.3(AARS2):c.1561C>T (p.Arg521Ter) AARS2 Sep 08, 2017 MedGen:C3279793,OMIM:614096,Orphanet:ORPHA319504;MedGen:C4014588,OMIM:615889 Combined oxidative phosphorylation deficiency 8;Leukoencephalopathy, progressive, with ovarian failure germline;paternal 6 44305072 GACGACAGCCCCAAGTACAACTACTCCCTGCGACCCAGCGGAAGTTATGGTGAGAGCCTGG 145945630 182313 NM_000038.5(APC):c.70C>T (p.Arg24Ter) APC Aug 04, 2017 MedGen:CN240755;MedGen:C2713442,OMIM:175100;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202;MedGen:CN169374 Familial adenomatous polyposis;Familial adenomatous polyposis 1;Hereditary cancer-predisposing syndrome;not provided;not specified germline;unknown 5 112754960 GAGGCACTGAAGATGGAGAACTCAAATCTTCGACAAGAGCTAGAAGATAATTCCAATCATC 28936396 23568 NM_000178.3(GSS):c.373C>T (p.Arg125Cys) GSS Nov 01, 1996 Human Phenotype Ontology:HP:0003343,MedGen:C0398746,OMIM:266130,Orphanet:ORPHA289846,SNOMED CT:234589002 Gluthathione synthetase deficiency germline 20 34942606 TCCCCACAGACTGTGTTCCTGGGCCTGAATCGCTCAGACTACATGTTCCAGCGCAGCGCAG 776749939 198652 NM_003900.4(SQSTM1):c.1160C>T (p.Pro387Leu) SQSTM1 Jan 18, 2017 MedGen:C4225326,OMIM:616437;MedGen:CN517202 Frontotemporal dementia and/or amyotrophic lateral sclerosis 3;not provided germline 5 179833777 TGAAGGAAGCTGCCTTGTACCCACATCTCCCGCCAGGCAAGTGAACCAAGAGGTTTTGTAC 121434344 17072 NM_017780.3(CHD7):c.2501C>T (p.Ser834Phe) CHD7 Oct 01, 2008 MedGen:C0265354,OMIM:214800,Orphanet:ORPHA138,SNOMED CT:47535005;MedGen:C3552136 CHARGE association;Hypogonadotropic hypogonadism 5 without anosmia germline 8 60816389 TTTCAAGGATATTGTTTTGTTCTTTCAGCTCTTATCTTCATTGTCAGTGGGCATCTATAGA 863223454 210097 NM_000093.4(COL5A1):c.4282C>T (p.Gln1428Ter) COL5A1 Jul 01, 2014 MedGen:CN517202 not provided germline 9 134818707 CCTCCTGGGAAGACTGGCCCCATCGGCCCCCAGGGGGCCCCTGGGAAGCCCGGACCGGATG 375717077 48081 NM_005327.4(HADH):c.706C>T (p.Arg236Ter) HADH Mar 01, 2011 MedGen:C1864948,OMIM:609975 Hyperinsulinemic hypoglycemia, familial, 4 germline 4 108027757 TACCTCATGGAAGCAATCAGGCTGTATGAACGAGGTATCCTTCTGACCCAGGCCAGGAGCA 111033260 19972 NM_033056.3(PCDH15):c.733C>T (p.Arg245Ter) PCDH15 Oct 18, 2017 MedGen:C1836027,OMIM:609533;MedGen:C1568247,OMIM:276900,Orphanet:ORPHA231169;MedGen:C1832845,OMIM:601067;MedGen:C1865885,OMIM:602083;MedGen:C1865885,OMIM:602083;MedGen:C1847089,OMIM:606943;MedGen:CN517202 Deafness, autosomal recessive 23;Usher syndrome, type 1;Usher syndrome, type 1D;Usher syndrome, type 1F;Usher syndrome, type 1F;Usher syndrome, type 1G;not provided germline;unknown 10 54317414 CAGGACCGTGCCCAAAATCTGAATGAGAGGCGAACCACCACCACCACTCTCACAGTGGATG 869312692 225859 NM_001356.4(DDX3X):c.619C>T (p.Gln207Ter) DDX3X Jul 01, 2015 MedGen:C4085582,OMIM:300958,Orphanet:ORPHA457260 Mental retardation, X-linked 102 de novo X 41343291 CTTACTCGTTATACTCGCCCAACTCCAGTGCAAAAGCATGCTATTCCTATTATCAAAGAGA 781590560 198119 NM_001927.3(DES):c.634C>T (p.Arg212Ter) DES Nov 03, 2014 MedGen:CN517202 not provided germline 2 219420150 GAAGAAGCAGAGAACAATTTGGCTGCCTTCCGAGCGGTGAGTGCCCTTCTTTTCCCCTTGC 562890289 375819 NM_003119.3(SPG7):c.1447C>T (p.Gln483Ter) SPG7 Mar 07, 2017 MedGen:C0037773,Orphanet:ORPHA685,SNOMED CT:39912006;MedGen:CN517202 Hereditary spastic paraplegia;not provided germline;inherited 16 89544770 CGGCACGTCTTCATTGATCTCCCCACGCTGCAGGTCAGAGCCAGGATCCCAGCCTCTCCCA 397507411 46735 NM_000059.3(BRCA2):c.8695C>T (p.Gln2899Ter) BRCA2 Nov 01, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN169374 Breast-ovarian cancer, familial 2;Familial cancer of breast;Hereditary cancer-predisposing syndrome;not specified germline 13 32376732 GCACTAACAAGACAGCAAGTTCGTGCTTTGCAAGATGGTGCAGAGCTTTATGAAGCAGTGA 121909118 22417 NM_005506.3(SCARB2):c.862C>T (p.Gln288Ter) SCARB2 Mar 17, 2017 MedGen:C0751779,OMIM:254900,Orphanet:ORPHA163696;MedGen:CN517202 Epilepsy, progressive myoclonic 4, with or without renal failure;not provided germline 4 76174276 TATATTACTTTCAGTGACTATGAGAGTGTACAGGGACTGCCTGCCTTTCGGTATAAAGTTC 119478058 19809 NM_030943.3(AMN):c.122C>T (p.Thr41Ile) AMN Mar 01, 2003 MedGen:C4016948 Megaloblastic anemia 1, Norwegian type germline 14 102923789 ACGTCGCAGCCAACTGGAGCCAGAACCGGACCCCGTGCGCCGGCGGCGCCGTTGAGTTCCC 63751221 45212 NM_000249.3(MLH1):c.298C>T (p.Arg100Ter) MLH1 Sep 08, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0009405,Orphanet:ORPHA443090;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:C1333991,OMIM:609310;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Hereditary nonpolyposis colon cancer;Lynch syndrome;Lynch syndrome II;not provided germline;unknown 3 37001045 GATTTAGCCAGTATTTCTACCTATGGCTTTCGAGGTGAGGTAAGCTAAAGATTCAAGAAAT 587780226 133611 NM_032043.2(BRIP1):c.1315C>T (p.Arg439Ter) BRIP1 Sep 18, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline 17 61799125 AATATAAGGAAGAAAGATCATGAACCCCTACGAGCTGTGTGCTGTAGCCTCATTAAGTAAG 121918339 18148 NM_139319.2(SLC17A8):c.632C>T (p.Ala211Val) SLC17A8 Jun 26, 2015 MedGen:C1854158,OMIM:605583 Deafness, autosomal dominant 25 germline 12 100396373 CAGCCTGCCATGGGATGTGGAGTAAGTGGGCACCACCTTTGGAGAGAAGCCGACTGGCCAC 61754425 153352 NM_004992.3(MECP2):c.55C>T (p.Gln19Ter) MECP2 Feb 15, 2011 MedGen:C0035372,OMIM:312750,Orphanet:ORPHA778,SNOMED CT:68618008 Rett syndrome de novo X 154032529 AGGGAAGAAAAGTCAGAAGACCAGGACCTCCAGGGCCTCAAGGACAAACCCCTCAAGTTTA 387906641 38723 NM_004523.3(KIF11):c.1159C>T (p.Arg387Ter) KIF11 Feb 10, 2012 MedGen:C1835265,OMIM:152950,Orphanet:ORPHA2526 Microcephaly with or without chorioretinopathy, lymphedema, or mental retardation germline 10 92621415 GAGTATACGGAGGAGATAGAACGTTTAAAACGAGATCTTGCTGCAGCCCGTGAGAAAAATG -1 446549 NM_000425.4(L1CAM):c.1267C>T (p.Gln423Ter) L1CAM Jul 27, 2017 MedGen:CN517202 not provided germline X 153869520 TTGCTGGCCAATGCCTACATCTACGTTGTCCGTGAGTGCCCTCCCTTCCTTACCTCCTAAC 878853226 237616 NM_004086.2(COCH):c.1159C>T (p.Leu387Phe) COCH Feb 16, 2016 MedGen:C1832425,OMIM:601369 Deafness, autosomal dominant 9 germline 14 30885994 AGTGTTGGAGATAGCAATTTCCGCCTCATGCTTGAATTTGTTTCCAACATAGCCAAGACTT 118204050 15791 NM_015346.3(ZFYVE26):c.1477C>T (p.Gln493Ter) ZFYVE26 Apr 01, 2008 MedGen:C1849128,OMIM:270700,Orphanet:ORPHA100996 Spastic paraplegia 15 germline 14 67802241 GCTCCAGTCCCTGAGCACCTGAGCCAGTGTCAGAACCTGACACTCTACCAGGGCTTCTGTG 757966746 237361 NM_001161766.1(AHCY):c.209C>T (p.Pro70Leu) AHCY May 19, 2014 MedGen:CN517202 not provided germline 20 34294083 CGGCGGCTGCCATTGCCAAGGCTGGCATTCCGGGTAAGTCCTGCTTGCTTCTGAGACGTGG 398122360 94414 NM_006735.3(HOXA2):c.703C>T (p.Gln235Ter) HOXA2 Nov 22, 2013 MedGen:C2676772,OMIM:612290,Orphanet:ORPHA140963 Microtia, hearing impairment, and cleft palate germline 7 27101154 GAGGACGAGGAAGAGAAGACGCTCTTTGAGCAAGCCCTTAGCGTCTCTGGGGCCCTTCTGG 104893611 20226 NM_032545.3(CFC1):c.334C>T (p.Arg112Cys) CFC1 Nov 01, 2000 MedGen:C1854334,OMIM:605376 Heterotaxy, visceral, 2, autosomal germline 2 130597896 TTCTGCGTGTGCCCGGCCCACTTCACCGGCCGCTACTGCGAGCATGACCAGAGGCGCAGGT 397517337 55137 NM_022124.5(CDH23):c.5272C>T (p.Gln1758Ter) CDH23 Feb 20, 2012 MedGen:C1832845,OMIM:601067 Usher syndrome, type 1D germline 10 71779351 TATGAGGGACCATTTGAAGTCACTGAGGGCCAGCCGGGGCCCAGAGTGTGGACCTTCCTGG 797045209 207846 NM_000352.4(ABCC8):c.3544C>T (p.Arg1182Trp) ABCC8 Nov 24, 2014 MedGen:C1835887,OMIM:610374 Transient neonatal diabetes mellitus 2 germline 11 17404525 ATCGTGTGCTACTTCATCCAGAAGTACTTCCGGGTGGCGTCCAGGTGATGGCCTCAGGGGT -1 425975 NM_152641.3(ARID2):c.2758C>T (p.Gln920Ter) ARID2 May 25, 2017 MedGen:CN517202 not provided germline 12 45850881 GTGGTACAGCAGCCTATTCAACAACCACAGCAGCCAACCCAACAAAGCGTAGTGATTGTAA 80044281 16434 NM_018418.4(SPATA7):c.322C>T (p.Arg108Ter) SPATA7 Jun 14, 2016 MedGen:C1858677,OMIM:604232;MedGen:CN239422 Leber congenital amaurosis 3;SPATA7-Related Disorders germline 14 88416794 AAAGAGTTCAAATTAACTAAAACTGCAATGCGAGCCAATTATAAAAATAATTCCAAGTCAC 121965080 26890 NM_000260.3(MYO7A):c.634C>T (p.Arg212Cys) MYO7A Oct 10, 1995 MedGen:C1848638 Usher syndrome, type 1B germline 11 77156903 GCCAAGACCATCCGCAATGACAACTCAAGCCGTTTCGGAAAGTACATCGACATCCACTTCA 397514679 50325 NM_006950.3(SYN1):c.1663C>T (p.Gln555Ter) SYN1 Jun 01, 2013 MedGen:C1845343,OMIM:300491,Orphanet:ORPHA85294 Epilepsy, X-linked, with variable learning disabilities and behavior disorders germline X 47574321 GCAGCCCGCCCGCCCGCCTCTCCGTCTCCCCAGCGCCAGGCGGGCCCCCCACAGGCTACCC 118204097 16487 NM_000190.3(HMBS):c.463C>T (p.Gln155Ter) HMBS Oct 01, 1990 MedGen:C0162565,OMIM:176000,Orphanet:ORPHA79276,SNOMED CT:234422006 Acute intermittent porphyria germline 11 119090230 ACCAGCTCCCTGCGAAGAGCAGCCCAGCTGCAGAGAAAGTTCCCGCATCTGGAGTTCAGGA 370880399 214177 NM_001080522.2(CC2D2A):c.3055C>T (p.Arg1019Ter) CC2D2A Apr 07, 2017 MedGen:C2676788,OMIM:612285;MedGen:CN517202 Joubert syndrome 9;not provided germline;unknown 4 15563395 CTAAGCCTTTTCAAGCTGGCAGAACAAAAGCGACCACTGCGGCCAAGGAGAAAAGGTCGGA 730880586 179217 NM_000256.3(MYBPC3):c.3034C>T (p.Gln1012Ter) MYBPC3 May 24, 2017 MedGen:CN517202 not provided germline 11 47333713 CGGCCTCAGGTGACCTGGACCAAAGAGGGGCAGCCCCTGGCAGGCGAGGAGGTGAGCATCC 755800734 441131 NM_031443.3(CCM2):c.55C>T (p.Arg19Ter) CCM2 Aug 02, 2017 MedGen:CN517202 not provided germline 7 45038277 CTGCAGCCTGGAATTGTCTCGCCATTTAAACGAGTATTCCTAAAAGGTGAAAAGAGTAGAG 137852355 25125 NM_000132.3(F8):c.6682C>T (p.Arg2228Ter) F8 Nov 27, 1986 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154861759 ATGTTTGCCACCTGGTCTCCTTCAAAAGCTCGACTTCACCTCCAAGGGAGGAGTAATGCCT -1 481612 NM_021007.2(SCN2A):c.4591C>T (p.Gln1531Ter) SCN2A Jan 19, 2018 MedGen:CN517202 not provided germline 2 165386785 CAAGGAATGGTCTTTGATTTTGTAACCAAACAAGTCTTTGATATCAGCATCATGATCCTCA 121434404 21273 NM_016156.5(MTMR2):c.1444C>T (p.Gln482Ter) MTMR2 May 01, 2000 MedGen:C1832399,OMIM:601382,Orphanet:ORPHA99955 Charcot-Marie-Tooth disease, type 4B1 germline 11 95841652 GCAGATGCAGACAGATCGCCTGTTTTTCTTCAATTTATTGACTGTGTCTGGCAGATGACAA 886038001 249129 NM_007294.3(BRCA1):c.2599C>T (p.Gln867Ter) BRCA1 Nov 01, 2017 MedGen:C2676676,OMIM:604370;MedGen:CN517202 Breast-ovarian cancer, familial 1;not provided germline 17 43092932 TTGCAGAATACATTCAAGGTTTCAAAGCGCCAGTCATTTGCTCCGTTTTCAAATCCAGGAA 757415879 295241 NM_000094.3(COL7A1):c.5797C>T (p.Arg1933Ter) COL7A1 Jun 14, 2016 MedGen:C0079294,Orphanet:ORPHA303,SNOMED CT:254185007 Dystrophic epidermolysis bullosa germline 3 48576272 CTCCAGGGCCTCCCTGGAGAGCGTGGCCTGCGAGGAGAGCCTGGAAGTGTGCCGGTGAGCC 730881240 180185 NM_000038.5(APC):c.1987C>T (p.Gln663Ter) APC Dec 21, 2016 MedGen:C2713442,OMIM:175100;MedGen:CN517202 Familial adenomatous polyposis 1;not provided germline 5 112837581 AGGCAAATCCTAAGAGAGAACAACTGTCTACAAACTTTATTACAACACTTAAAATCTCATA 121917815 20029 NM_001177800.1(ADIPOQ):c.334C>T (p.Arg112Cys) ADIPOQ Oct 10, 2003 MedGen:C2675519 Hypoadiponectinemia germline 3 186854303 GGAGAACCTGGAGAAGGTGCCTATGTATACCGCTCAGCATTCAGTGTGGGATTGGAGACTT 114269482 36720 NM_003060.3(SLC22A5):c.695C>T (p.Thr232Met) SLC22A5 Jun 20, 2017 MedGen:C0342788,OMIM:212140,Orphanet:ORPHA158,SNOMED CT:21764004;MedGen:CN517202 Renal carnitine transport defect;not provided germline 5 132385370 TTGGCAAGTCAGTTCGTATAATATTCTCTACGTTAGGAGTGTGCATATTTTATGCATTTGG -1 448998 NM_001165963.2(SCN1A):c.4109C>T (p.Ala1370Val) SCN1A Jun 20, 2017 MedGen:C0393706,Orphanet:ORPHA1934 Early infantile epileptic encephalopathy germline 2 166002647 TTTTCAGCATCATGGGCGTAAATTTGTTTGCTGGCAAATTCTACCACTGTATTAACACCAC 118203996 16297 NM_001146289.1(P3H1):c.1102C>T (p.Arg368Ter) P3H1 Oct 02, 2014 MedGen:C1970458,OMIM:610915;MedGen:CN517202 Osteogenesis imperfecta type 8;not provided germline 1 42755616 TACCCTCAGAGTGCCAAGGAGTACCGACAGCGAAGCCTACTGGAAAAAGAACTGCTTTTCT 104893895 217218 NM_002449.4(MSX2):c.443C>T (p.Pro148Leu) MSX2 Oct 01, 2013 MedGen:C1858160,OMIM:604757 Craniosynostosis 2 germline 5 174729222 AACACAAGACCAATCGGAAGCCGCGCACGCCCTTTACCACATCCCAGCTCCTCGCCCTGGA 113422242 197789 NM_000138.4(FBN1):c.1693C>T (p.Arg565Ter) FBN1 Jan 06, 2017 MedGen:CN118826,Orphanet:ORPHA91387;MedGen:CN517202;MedGen:CN169374 Thoracic aortic aneurysm and aortic dissection;not provided;not specified germline 15 48510065 TGCGTGTGTAATGCGGGCTTTCATGTTACACGAGATGGGAAGAACTGTGAAGGTAATAATA 886040464 261174 NM_000059.3(BRCA2):c.3217C>T (p.Gln1073Ter) BRCA2 Aug 22, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 2;Hereditary cancer-predisposing syndrome germline 13 32337572 CAGTCAATTAATACTGTATCTGCACATTTACAGAGTAGTGTAGTTGTTTCTGATTGTAAAA 66616070 426957 NM_001171.5(ABCC6):c.2245C>T (p.Gln749Ter) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16182414 CCTGAGGGAATCCACACTTCAATTGGGGAGCAGGTGAGAGTTTGGGGGTCTTTTTGGGACA 62641228 17191 NM_017929.5(PEX26):c.292C>T (p.Arg98Trp) PEX26 Jun 02, 2016 MedGen:C3539168,OMIM:614872;MedGen:C3553951,OMIM:614873 Peroxisome biogenesis disorder 7A;Peroxisome biogenesis disorder 7B germline 22 18079935 GTGGGGATCCAGGCCCTGGCAGAAATGGATCGGTGGCAAGAAGTCCTCTCCTGGGTCCTTC 794728276 197596 NM_000138.4(FBN1):c.7624C>T (p.Gln2542Ter) FBN1 Jun 19, 2017 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:CN118826,Orphanet:ORPHA91387 Marfan syndrome;Thoracic aortic aneurysm and aortic dissection germline 15 48421633 ATCAATCTGTGCGGGTCTAAGGGCATTTGCCAGAACACTCCTGGAAGCTTCACCTGTGAAT 764952788 262112 NM_015247.2(CYLD):c.1327C>T (p.Gln443Ter) CYLD Sep 23, 2016 MedGen:C1851526,OMIM:132700 Cylindromatosis, familial germline 16 50779853 ATTGGCCACAGTCCACTTTCTCTGTCAGCCCAGTCTGTAATGGAAGAGCTAAACACTGCAC 876657678 230443 NM_000059.3(BRCA2):c.3187C>T (p.Gln1063Ter) BRCA2 Jul 06, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145;MedGen:CN517202 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome;not provided germline 13 32337542 TTAGATAATCAAAAGAAACTGAGCAAGCCTCAGTCAATTAATACTGTATCTGCACATTTAC 886037925 248738 NM_001033855.2(DCLRE1C):c.194C>T (p.Thr65Ile) DCLRE1C Sep 14, 2016 MedGen:C1865370,OMIM:602450 Severe combined immunodeficiency with sensitivity to ionizing radiation germline 10 14945157 TGAAGGTTTATCTATACTGTTCACCTGTGACTAAGGAGTTGTTGTTAACGAGCCCGAAATA 797045915 207445 NM_005045.3(RELN):c.5587C>T (p.Gln1863Ter) RELN Mar 07, 2015 MedGen:C0796089,OMIM:257320,Orphanet:ORPHA89844 Lissencephaly 2 germline 7 103557992 GATCTAGATTGTACAAATACAATGTATGTCCAGTTTTCACTTAGATTTATAGCAAAAAGTA 267607623 196476 NM_170707.3(LMNA):c.1057C>T (p.Gln353Ter) LMNA Aug 16, 2017 MedGen:CN230736;MedGen:CN043576;MedGen:CN517202 Cardiovascular phenotype;Charcot-Marie-Tooth disease, type 2;not provided germline 1 156136021 CGGGAGATGGCCGAGATGCGGGCAAGGATGCAGCAGCAGCTGGACGAGTACCAGGAGCTTC -1 445007 NM_001844.4(COL2A1):c.2101C>T (p.Arg701Ter) COL2A1 Oct 26, 2017 MedGen:CN517202 not provided germline 12 47982940 CACTTCTTGGTGTCTCTGCCGCAGGGTGAACGAGGTTTCCCAGGTGAACGTGGCTCTCCCG 121909323 23545 NM_001127221.1(CACNA1A):c.3832C>T (p.Arg1278Ter) CACNA1A Nov 25, 2014 MedGen:C1720416,OMIM:108500,Orphanet:ORPHA97,SNOMED CT:420932006 Episodic ataxia type 2 germline;paternal;unknown 19 13277122 CTCTCTTGCTTTTATCCCTTACAGGTGCTGCGATACTTTGACTACGTTTTTACAGGCGTCT -1 481816 NM_006766.4(KAT6A):c.3055C>T (p.Arg1019Ter) KAT6A Nov 15, 2017 MedGen:CN517202 not provided germline 8 41937553 TTCTCTATTAAACAGAAACCATTTCTCCACCGAAGGAGGAGAGTCCGAAAGCGCAAACACC 1021662947 484718 NM_024675.3(PALB2):c.3166C>T (p.Gln1056Ter) PALB2 Oct 09, 2015 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 16 23614039 CTGAAAAAGATGCACATTGATGATTCTTACCAAGCTTCAGTCTGTCACAAAGCCTATTCTG 765998048 259988 NM_004183.3(BEST1):c.604C>T (p.Arg202Trp) BEST1 May 26, 2016 MedGen:CN517202 not provided germline 11 61956966 TCAATGAAGGCGTGGCTTGGAGGTCGAATCCGGGACCCTATCCTGCTCCAGAGCCTGCTGA -1 431910 NM_020732.3(ARID1B):c.1960C>T (p.Gln654Ter) ARID1B Jun 30, 2017 MedGen:CN029606,OMIM:135900;MedGen:CN517202 Coffin-Siris syndrome 1;not provided de novo;germline 6 156935499 ATGTCTCAGGAAGGCTATGGAACTAGATCTCAACCTCCTCTGGCCCCCGGAAAACCTAACC 1057517686 227511 NM_001170535.2(ATAD3A):c.1582C>T (p.Arg528Trp) ATAD3A Nov 29, 2016 MedGen:C4310677,OMIM:617183;MedGen:CN517202 Harel-Yoon syndrome;not provided de novo;germline;unknown 1 1529299 GTCGCTCGGCTGACGGAGGGCATGTCGGGCCGGGAGATCGCTCAGCTGGCCGTGTCCTGGC -1 425312 NM_020699.3(GATAD2B):c.709C>T (p.Gln237Ter) GATAD2B Jun 27, 2017 MedGen:CN517202 not provided germline 1 153818060 TCTCGGCCTGGGGCCCAAGGGGTTGAACCTCAAAATTTGAGAACATTACAGGTATGTGACC 137852208 25822 NM_194277.2(FRMD7):c.1003C>T (p.Arg335Ter) FRMD7 Mar 01, 2011 MedGen:C1839580,OMIM:310700 Infantile nystagmus, X-linked germline X 132080053 AGGAAACATTACCCATCTCAGTACCATGAACGACAGTGCAGGTCCTCACCAGACCTCCTCT 121434505 23748 NM_021922.2(FANCE):c.355C>T (p.Gln119Ter) FANCE Nov 01, 2000 MedGen:C3160739,OMIM:600901 Fanconi anemia, complementation group E germline 6 35455853 CTGCCGGAAAGTGGGCTCCTCTCTGTGCTGCAGATTGCCCAGCAGGACCTAGCCCCTGACC 80356814 77772 NM_170707.3(LMNA):c.1908C>T (p.Ser636=) LMNA Apr 30, 2015 MedGen:C0007959,Orphanet:ORPHA166,SNOMED CT:50548001;MedGen:CN517202 Charcot-Marie-Tooth disease;not provided germline 1 156138697 CCGCAGTGTGGGGGGCAGTGGGGGTGGCAGCTTCGGGGACAATCTGGTCACCCGCTCCTAC 1064794207 409508 NM_001009944.2(PKD1):c.1687C>T (p.Gln563Ter) PKD1 Feb 22, 2017 MedGen:CN517202 not provided germline 16 2116564 CTGCAGGGACCCCTGACGCCTCTGGCACAGCAGGACGGCCTCTCAGCCCCGCACGAGCCCG 201803986 200652 NM_138413.3(HOGA1):c.107C>T (p.Ala36Val) HOGA1 Jun 14, 2016 MedGen:C0020501,Orphanet:ORPHA416,SNOMED CT:17901006;MedGen:C3150878,OMIM:613616,Orphanet:ORPHA93600 Primary hyperoxaluria;Primary hyperoxaluria, type III germline 10 97584810 CCTCAGGGGAGGGGAAGAAGGTGGACATTGCGGGTATCTACCCCCCTGTGACCACCCCCTT 758718347 229335 NM_032119.3(ADGRV1):c.7129C>T (p.Arg2377Ter) ADGRV1 Jun 23, 2015 MedGen:C1854237,OMIM:605472 Usher syndrome, type 2C germline 5 90692782 AGAAGTTCCTGTGCTAATATAACTGTCAGGCGAAGGTATATGAGATAGCTACTTGCCTCTG 281875234 40157 NM_001004334.3(GPR179):c.1807C>T (p.His603Tyr) GPR179 Feb 10, 2012 MedGen:C3281215,OMIM:614565;MedGen:CN517202 Congenital stationary night blindness, type 1E;not provided germline 17 38334016 CGCCCCAGGTTTGTGCTGGTTCCCTCTCTGCACCCGGACTGGACCCTCCTCCTCTTCTTCT 1135401799 424660 NM_000834.3(GRIN2B):c.1966C>T (p.Gln656Ter) GRIN2B Jan 06, 2017 MedGen:C4015316,OMIM:616139 Epileptic encephalopathy, early infantile, 27 de novo 12 13608647 TACACTGCCAACTTAGCTGCCTTCATGATCCAAGAGGAATATGTGGACCAGGTTTCTGGCC -1 441557 NM_000217.2(KCNA1):c.1214C>T (p.Pro405Leu) KCNA1 Dec 22, 2016 MedGen:CN517202 not provided germline 12 4912592 CTGGTGTGCTAACAATTGCCCTGCCCGTACCTGTCATTGTGTCCAATTTCAACTATTTCTA 387907311 45870 NM_014956.4(CEP164):c.1573C>T (p.Gln525Ter) CEP164 Oct 08, 2012 MedGen:C3541853,OMIM:614845 Nephronophthisis 15 germline 11 117381864 GCAGCCAGCCTCAGCCTGCAGCTGTCCCTCCAGAGGTAAGGATGAGGGGAAGCATCCTCAT 267607087 19843 NM_006415.3(SPTLC1):c.992C>T (p.Ser331Phe) SPTLC1 Oct 01, 2009 MedGen:CN068845 Neuropathy, hereditary sensory and autonomic, type I, severe germline 9 92047261 TGTCTTCATTTGTTTCTTCTCAGCGACTTTCCGGCCAGGGATACTGCTTTTCAGCTTCGTT 5030737 29391 NM_000242.2(MBL2):c.154C>T (p.Arg52Cys) MBL2 Aug 01, 2006 MedGen:C1835140,OMIM:614372 Mannose-binding protein deficiency germline 10 52771482 GGCATCAACGGCTTCCCAGGCAAAGATGGGCGTGATGGCACCAAGGGAGAAAAGGGGGAAC 751838040 209352 NM_000124.3(ERCC6):c.466C>T (p.Gln156Ter) ERCC6 Sep 09, 2016 MedGen:C0751038,OMIM:133540,Orphanet:ORPHA90322;MedGen:CN517202 Cockayne syndrome B;not provided germline 10 49530797 TCCCTAAGGCAAATCAATAAAATTATTGAACAGCTTAGCCCTCAAGCTGCCACCAGCAGAG 267606645 33297 NM_013411.4(AK2):c.556C>T (p.Arg186Cys) AK2 Jan 01, 2009 MedGen:C0272167,OMIM:267500,Orphanet:ORPHA33355,SNOMED CT:111584000 Reticular dysgenesis germline 1 33013345 TCAGATGATAATGAAAAGGCCTTGAAAATCCGCCTGCAAGCCTACCACACTCAAACCACCC 121918568 28195 NM_000448.2(RAG1):c.940C>T (p.Arg314Trp) RAG1 May 08, 2008 MedGen:C2673536,OMIM:233650,Orphanet:ORPHA157949 Combined cellular and humoral immune defects with granulomas germline 11 36574244 GTGGAGACCAACTGTAAGCATGTCTTTTGCCGGGTCTGCATTCTCAGATGCCTCAAAGTCA 121909502 33402 NM_000751.2(CHRND):c.866C>T (p.Ser289Phe) CHRND Jan 01, 2002 MedGen:C4225372,OMIM:616321 Myasthenic syndrome, congenital, 3a, slow-channel germline 2 232531397 CAGTGGCCATCTCGGTGCTCCTGGCTCAGTCTGTCTTCCTGCTGCTCATCTCCAAGCGTCT 886039745 260300 NM_000444.5(PHEX):c.1204C>T (p.Gln402Ter) PHEX Aug 29, 2016 MedGen:CN517202 not provided germline X 22114488 GTAATCCAGGGGACCACAACTTTGCTGCCTCAATGGGACAAATGTGTAAACTTTATTGAAA 797045054 205768 NM_031433.3(MFRP):c.958C>T (p.Gln320Ter) MFRP Feb 06, 2013 MedGen:C1970236,OMIM:611040,Orphanet:ORPHA251279 Microphthalmia, isolated 5 germline 11 119344332 GGCACTTTCTCTACTCCCAGCTACCTGCAGCAGTACCCTCACCAACTGGTAAGCACAGTGC 865985297 475719 NM_000051.3(ATM):c.1537C>T (p.Gln513Ter) ATM Jun 09, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 11 108251002 GAAAACTTTGGCTTACTTGGAGCCATAATTCAGGGTAGTTTAGTTGAGGTTGACAGAGAAT 120074126 18031 NM_000543.4(SMPD1):c.1267C>T (p.His423Tyr) SMPD1 Oct 26, 2016 MedGen:C0268242,OMIM:257200,Orphanet:ORPHA77292,SNOMED CT:52165006;MedGen:C0268243,OMIM:607616,Orphanet:ORPHA77293,SNOMED CT:39390005;MedGen:C0028064,SNOMED CT:58459009 Niemann-Pick disease, type A;Niemann-Pick disease, type B;Sphingomyelin/cholesterol lipidosis germline;unknown 11 6393620 ATTACCATCCTTAATTCTCCCTACTAGGTGCATATAATTGGCCACATTCCCCCAGGGCACT 886038797 258931 NM_000138.4(FBN1):c.7C>T (p.Arg3Ter) FBN1 Sep 01, 2017 MedGen:CN118826,Orphanet:ORPHA91387;MedGen:CN517202 Thoracic aortic aneurysm and aortic dissection;not provided germline 15 48644763 GGGAGCCGGTGGCGGCTCGGCATCATGCGTCGAGGGCGTCTGCTGGAGATCGCCCTGGGAT 34999973 30553 NM_000518.4(HBB):c.-140C>T HBB Nov 08, 2015 MedGen:C0472767,Orphanet:ORPHA231222,SNOMED CT:191189009;MedGen:C3841475;MedGen:C0005283,OMIM:613985,Orphanet:ORPHA848,SNOMED CT:65959000 Beta thalassemia intermedia;Beta-plus-thalassemia;beta Thalassemia germline;unknown 11 5227161 TCATCACTTAGACCTCACCCTGTGGAGCCACACCCTAGGGTTGGCCAATCTACTCCCAGGA 896979080 425630 NM_001135243.1(TCOF1):c.1990C>T (p.Gln664Ter) TCOF1 Jun 06, 2017 MedGen:CN517202 not provided germline 5 150376178 GCCAAGGTCGCCCCTGTGCGAGTGGGCACCCAAGCCCCCCGGAAAGCAGGAACTGCGACTT 121907938 19063 NM_000152.4(GAA):c.2173C>T (p.Arg725Trp) GAA Dec 15, 2016 MedGen:CN568813;MedGen:C0017921,OMIM:232300,Orphanet:ORPHA365,SNOMED CT:124462004,SNOMED CT:237967002 Glycogen storage disease II, adult form;Glycogen storage disease, type II germline;unknown 17 80113350 CAGGCCCACGTCGCGGGGGAGACCGTGGCCCGGCCCCTCTTCCTGGAGTGAGTGACCTAGG -1 414701 NM_015560.2(OPA1):c.1198C>T (p.Pro400Ser) OPA1 Apr 07, 2017 MedGen:C0751651,Orphanet:ORPHA68380 Mitochondrial diseases germline 3 193643430 GGACTACAGAGGATGGTGCTTGTTGACTTACCAGGTGTGATTAATGTAAGTATATACAAAA 151173406 39496 NM_019109.4(ALG1):c.826C>T (p.Arg276Trp) ALG1 Nov 01, 2010 MedGen:C2931005,OMIM:608540,Orphanet:ORPHA79327 Congenital disorder of glycosylation type 1K germline 16 5078842 GGGAGCGGGCTGGTGACGCGTCTCCGTGAGCGGCCAGCCCTGCTGGTCAGCAGCACGAGCT 121965049 15203 NM_000274.3(OAT):c.955C>T (p.His319Tyr) OAT Oct 15, 1989 Human Phenotype Ontology:HP:0012026,MedGen:C0599035,OMIM:258870,SNOMED CT:276426004 Ornithine aminotransferase deficiency germline 10 124401785 GACATCATGCTGACCATTAAGCCAGGGGAGCATGGGTCCACATACGGTGGCAATCCACTAG 797045752 207225 NM_133433.3(NIPBL):c.2521C>T (p.Arg841Ter) NIPBL Dec 03, 2014 MedGen:CN029798,OMIM:122470 Cornelia de Lange syndrome 1 germline 5 36985701 GAGCGACATCGAGGGGATCAGTCTAGGGTTCGAAGACCAGAAACATTGAGATCCTCTAGTA 267606713 26543 NM_003159.2(CDKL5):c.863C>T (p.Thr288Ile) CDKL5 Mar 13, 2014 MedGen:C1839333,OMIM:300672 Early infantile epileptic encephalopathy 2 germline;unknown X 18598499 TGAAGTTGGACCCAGCTGACAGATACTTGACAGAACAGTGTTTGAATCACCCTACATTTCA -1 433060 NM_000118.3(ENG):c.760C>T (p.Gln254Ter) ENG Jul 07, 2016 MedGen:CN169374 not specified germline 9 127825287 CCCGGGGATCTCGATGCCGTCCTCATCCTGCAGGGTCCCCCCTACGTGTCCTGGCTCATCG 369587937 131939 NM_015474.3(SAMHD1):c.1324C>T (p.Arg442Ter) SAMHD1 Mar 13, 2014 MedGen:C2749659,OMIM:612952 Aicardi Goutieres syndrome 5 germline 20 36905450 TACTCTACTGATCCCAAATTGAAAGACGCACGAGAGATTTTAAAACAAATTGAATACCGTA 398123278 98595 NM_000255.3(MUT):c.91C>T (p.Arg31Ter) MUT Dec 01, 2016 MedGen:C1855114,OMIM:251000;MedGen:CN517202 Methylmalonic aciduria due to methylmalonyl-CoA mutase deficiency;not provided germline 6 49459376 GAATCATCAGGCTCCAGGCTCATACAGCAACGACTTCTACACCAGCAACAGCCCCTTCACC 752550849 202058 NM_014141.5(CNTNAP2):c.1447C>T (p.Arg483Ter) CNTNAP2 Apr 27, 2017 MedGen:C1864887,OMIM:610042,Orphanet:ORPHA163681;MedGen:CN517202 Cortical dysplasia-focal epilepsy syndrome;not provided germline 7 147300239 ACCATCGATGGAGATGAAGCATCAGCAGTTCGAACTAATAGTCCCCTTCAAGTTAAAACTG 104886194 35906 NM_000495.4(COL4A5):c.2788C>T (p.Gln930Ter) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108622696 TTGATTTTAGGTGATGATGGCTTGCAGGGTCAGCCAGGACTTCCTGGCCCTACAGGAGAAA 1057518213 359594 NM_020732.3(ARID1B):c.1360C>T (p.Gln454Ter) ARID1B Nov 09, 2016 MedGen:CN517202 not provided germline 6 156779289 AGCGCGCCGCCGCCGCCGCCGTCGCAGCCCCAGTCCCAGGCGGCGGCGGCGGGGGCGGCGG 387906652 38750 NM_001257180.1(SLC20A2):c.1802C>T (p.Ser601Leu) SLC20A2 Jun 27, 2013 Gene:23706,MedGen:C0393590,OMIM:213600,Orphanet:ORPHA1980,SNOMED CT:110997000 Idiopathic basal ganglia calcification 1 germline 8 42417960 CTTTGCAATGTCTGCTCCCACAGGTGGGCTCGGTGGTGGCCGTGGGCTGGATCCGCTCCCG 387906651 38743 NM_002382.4(MAX):c.97C>T (p.Arg33Ter) MAX Apr 20, 2017 MedGen:C1708353,Orphanet:ORPHA29072;MedGen:C0027672,SNOMED CT:699346009;MedGen:C3149711 Hereditary Paraganglioma-Pheochromocytoma Syndromes;Hereditary cancer-predisposing syndrome;Pheochromocytoma, susceptibility to germline 14 65093782 GACAAACGGGCTCATCATAATGCACTGGAACGAAAACGTAGGGACCACATCAAAGACAGCT 58730926 29630 NM_000422.2(KRT17):c.280C>T (p.Arg94Cys) KRT17 Aug 15, 2016 MedGen:C1721007,OMIM:167210;Human Phenotype Ontology:HP:0012035,MedGen:C0259771,OMIM:184500,Orphanet:ORPHA841,SNOMED CT:109433009;MedGen:CN517202 Pachyonychia congenita 2;Steatocystoma multiplex;not provided germline 17 41624230 GAGAAGGCCACCATGCAGAACCTCAATGACCGCCTGGCCTCCTACCTGGACAAGGTGCGTG 201082169 481447 NM_138694.3(PKHD1):c.10174C>T (p.Gln3392Ter) PKHD1 Nov 23, 2017 MedGen:C0085548,OMIM:263200,Orphanet:ORPHA731,SNOMED CT:28770003 Autosomal recessive polycystic kidney disease germline 6 51659952 TTTTCTTTTATAGGTACATTTAGAGAAGAACAGAAATGTACATACCAATTTCTGATGCAAG 281865494 47593 NM_004614.4(TK2):c.416C>T (p.Ala139Val) TK2 Jan 11, 2016 MedGen:C3149750,OMIM:609560;MedGen:CN517202 Mitochondrial DNA depletion syndrome 2;not provided germline 16 66529027 TACGGTTGATGGAGAGGTCGATTCACAGCGCAAGATACATTTTTGTAGAAAACCTGTATAG 863225309 214679 NM_000038.5(APC):c.1297C>T (p.Gln433Ter) APC - MedGen:CN517202 not provided unknown 5 112819329 TGGCAGGAAGCTCATGAACCAGGCATGGACCAGGACAAAAATCCAAGTATGTTCTCTATAG -1 442792 NM_031844.2(HNRNPU):c.1681C>T (p.Gln561Ter) HNRNPU Oct 23, 2017 MedGen:CN517202 not provided germline 1 244856790 AAACTGAACACACTGTTGCAGAGAGCCCCCCAGTGTCTTGGGAAATTTATTGAGATTGCTG 1057517856 359727 NM_003165.3(STXBP1):c.1012C>T (p.Gln338Ter) STXBP1 Nov 17, 2016 MedGen:CN517202 not provided germline 9 127672099 TCCCAGATGCTGAAGAAGATGCCTCAGTACCAGAAAGAGCTCAGCAAGGTATGGCAGCCCC 398122729 97231 NM_000059.3(BRCA2):c.1642C>T (p.Gln548Ter) BRCA2 Nov 21, 2016 MedGen:C2675520,OMIM:612555;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 2;Hereditary cancer-predisposing syndrome germline 13 32333120 AGTGGACTGGAAATACATACTGTTTGCTCACAGAAGGAGGACTCCTTATGTCCAAATTTAA 1060499630 380469 NM_000143.3(FH):c.322C>T (p.Gln108Ter) FH Jan 17, 2017 Human Phenotype Ontology:HP:0007437,MedGen:C1708350,OMIM:150800,Orphanet:ORPHA523 Multiple cutaneous leiomyomas germline 1 241513659 ATCTTGAAGCGAGCGGCCGCTGAAGTAAACCAGGATTATGGTCTTGATCCAAAGATTGCTA 80338652 18848 NM_000081.3(LYST):c.3310C>T (p.Arg1104Ter) LYST Mar 23, 2017 MedGen:CN068762;MedGen:C0007965,OMIM:214500,Orphanet:ORPHA167,SNOMED CT:111396008;MedGen:CN517202 Chediak-Higashi syndrome, adult type;Chédiak-Higashi syndrome;not provided germline 1 235805826 CAAGAAAGTGAGACCTCACTTCAAAGTATACGACTTTTGGAAGCCCTTCTGGCCATTTGTC 397507617 65901 NM_000059.3(BRCA2):c.196C>T (p.Gln66Ter) BRCA2 Sep 08, 2016 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome germline 13 32319205 AATTACGAACCAAACCTATTTAAAACTCCACAAAGGAAACCATCTTATAATCAGCTGGCTT 121908544 20937 NM_000334.4(SCN4A):c.4342C>T (p.Arg1448Cys) SCN4A Mar 16, 2017 MedGen:CN074266,OMIM:170500;MedGen:C1868617,OMIM:168300;MedGen:CN517202 Hyperkalemic Periodic Paralysis Type 1;Paramyotonia congenita of von Eulenburg;not provided germline 17 63941940 CAGAAGTACTTCGTGTCACCCACGCTGTTCCGTGTGATCCGCCTGGCGCGGATTGGGCGTG 398123168 98367 NM_000143.3(FH):c.952C>T (p.His318Tyr) FH Jan 17, 2017 Human Phenotype Ontology:HP:0007437,MedGen:C1708350,OMIM:150800,Orphanet:ORPHA523;MedGen:CN517202 Multiple cutaneous leiomyomas;not provided germline 1 241504198 GCTCCGAATAAATTTGAAGCTCTGGCTGCTCATGACGCTCTGGTTGAGCTCAGTGGAGCCA 397514614 48428 NM_139242.3(MTFMT):c.374C>T (p.Ser125Leu) MTFMT Dec 03, 2012 MedGen:C3554182,OMIM:614947,Orphanet:ORPHA319524 Combined oxidative phosphorylation deficiency 15 germline 15 65026876 CTGGAGAATATGATGTTGGAGTAGTGGCTTCGTTTGGCCGACTTTTGAATGAGGCTCTTAT 63750261 96838 NM_000535.6(PMS2):c.703C>T (p.Gln235Ter) PMS2 Mar 11, 2014 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Hereditary cancer-predisposing syndrome;Lynch syndrome germline 7 5999110 GAAAATATCGGCTCTGTGTTTGGGCAGAAGCAGGTAGTGATGGCCGGTTACTTCAACGCCT 794728130 197112 NM_004415.3(DSP):c.6850C>T (p.Arg2284Ter) DSP Aug 04, 2016 MedGen:CN517202 not provided germline 6 7584112 ATTTATGAGGCCATGAAAATTGGCTTAGTCCGACCTGGTACTGCTCTGGAGTTGCTGGAAG 72555370 15983 NM_000404.3(GLB1):c.202C>T (p.Arg68Trp) GLB1 Jul 01, 2003 MedGen:C0268272,OMIM:230600,Orphanet:ORPHA79256,SNOMED CT:18756002 GM1 gangliosidosis type 2 germline 3 33072587 TCCCGTGTGCCCCGCTTCTACTGGAAGGACCGGCTGCTGAAGATGAAGATGGCTGGGCTGA 199472916 78116 NM_000238.3(KCNH2):c.1600C>T (p.Arg534Cys) KCNH2 Jan 19, 2017 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MeSH:D008133,MedGen:C0023976,SNOMED CT:9651007;MedGen:CN517202 Congenital long QT syndrome;Long QT syndrome;not provided germline 7 150951793 CTGAAGACTGCGCGGCTGCTGCGGCTGGTGCGCGTGGCGCGGAAGCTGGATCGCTACTCAG 121912979 31925 NM_000498.3(CYP11B2):c.814C>T (p.Gln272Ter) CYP11B2 Jul 01, 2004 MedGen:C3463917,OMIM:610600 Corticosterone methyloxidase type 2 deficiency germline 8 142914404 CCTGCTCCCTGGACAGGTGACAACTGTATCCAGAAAATCTACCAGGAACTGGCCTTCAACC 199472760 67600 NM_000218.2(KCNQ1):c.1024C>T (p.Leu342Phe) KCNQ1 Jul 06, 2011 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MedGen:CN517202 Congenital long QT syndrome;not provided germline 11 2583537 TTCTCTGTCTTTGCCATCTCCTTCTTTGCGCTCCCAGCGGTAGGTGCCCCGTGGGTGCGTT 199422236 24814 NM_004187.3(KDM5C):c.2080C>T (p.Arg694Ter) KDM5C Feb 01, 2005 MedGen:C1845243,OMIM:300534,Orphanet:ORPHA85279 Mental retardation, syndromic, Claes-Jensen type, X-linked germline X 53199140 AAATGCCCTTAGGGTATCACAGAGGCTGAGCGAGAGGCTTTCGAGCTGCTCCCAGATGATG 878853949 241759 NM_000321.2(RB1):c.2053C>T (p.Gln685Ter) RB1 Mar 06, 2016 MedGen:C0027672,SNOMED CT:699346009;Human Phenotype Ontology:HP:0009919,MeSH:D012175,MedGen:C0035335,OMIM:180200,Orphanet:ORPHA790 Hereditary cancer-predisposing syndrome;Retinoblastoma germline 13 48459780 GAATTAGAACATATCATCTGGACCCTTTTCCAGCACACCCTGCAGAATGAGTATGAACTCA 1057523999 368490 NM_032861.3(SERAC1):c.493C>T (p.Gln165Ter) SERAC1 Dec 16, 2016 MedGen:CN517202 not provided germline 6 158144415 ACAAAAGAAAATGCTTTTTCAATAGATTACCAGTATAGGATAATTGCTCAAGCCTGTGATC 121909295 23211 NM_000337.5(SGCD):c.493C>T (p.Arg165Ter) SGCD May 01, 1997 MedGen:C1832525,OMIM:601287,Orphanet:ORPHA219 Limb-girdle muscular dystrophy, type 2F germline 5 156595042 AATGAAGTGGTAGTAGGAGCTGAAAGATTACGAGTTTTAGGTAAGGAAACTTGAATCATTT 398123121 98257 NM_000038.5(APC):c.3982C>T (p.Gln1328Ter) APC Mar 08, 2017 MedGen:CN240755;MedGen:C2713442,OMIM:175100;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Familial adenomatous polyposis;Familial adenomatous polyposis 1;Hereditary cancer-predisposing syndrome;not provided germline 5 112839576 GATCCTGTGAGCGAAGTTCCAGCAGTGTCACAGCACCCTAGAACCAAATCCAGCAGACTGC 541024038 178806 NM_001242896.1(DEPDC5):c.2527C>T (p.Arg843Ter) DEPDC5 Apr 13, 2016 Gene:50987,MedGen:C1858477,OMIM:604364 Epilepsy, familial focal, with variable foci 1 germline 22 31843106 ATTATTATTTTTCTGTTAGGCCTTGTGTCCCGAAACCGCCCTGAGGAGGAGGACCAGTATT 786201040 182987 NM_004329.2(BMPR1A):c.1480C>T (p.Arg494Ter) BMPR1A Jul 01, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline 10 86923600 ACTGAACATCTCTTTACTTTTCAGTGTCTACGAGCAGTTTTGAAGCTAATGTCAGAATGCT 199476204 47862 NM_207352.3(CYP4V2):c.1348C>T (p.Gln450Ter) CYP4V2 Apr 12, 2012 MedGen:C1859486,OMIM:210370,Orphanet:ORPHA41751 Bietti crystalline corneoretinal dystrophy germline 4 186209215 CAGCCTGAGCGGTTCTTCCCCGAGAATGCACAAGGGCGCCATCCATATGCCTACGTGCCCT 104894371 17575 NM_001002020.2(PUS1):c.346C>T (p.Arg116Trp) PUS1 Jun 01, 2004 MedGen:C1838103,OMIM:600462 Myopathy, lactic acidosis, and sideroblastic anemia 1 germline 12 131932301 ATGAGGAAAATGTCCTTCCAGCGCTGCGCCCGGACAGACAAGGTGGGTGGTGGCCTTCTCT 397507525 48990 NM_002834.4(PTPN11):c.781C>T (p.Leu261Phe) PTPN11 Apr 03, 2017 MeSH:D009634,MedGen:C0028326,Orphanet:ORPHA648,SNOMED CT:205824006;MedGen:CN166718,Orphanet:ORPHA98733;MedGen:CN517202 Noonan syndrome;Rasopathy;not provided germline 12 112472968 TTCCAGACACTACAACAACAGGAGTGCAAACTTCTCTACAGCCGAAAAGAGGGTCAAAGGC 121918551 20086 NM_015665.5(AAAS):c.1288C>T (p.Leu430Phe) AAAS Dec 01, 2008 MedGen:C1856419 Achalasia-alacrima syndrome germline 12 53308095 AGGGTACAGGATGGTAAACCAGTCATCCTCCTTTTTCGCACTCGAAACAGCCCTGTGTTTG 876661062 231875 NM_000059.3(BRCA2):c.4651C>T (p.Gln1551Ter) BRCA2 Sep 03, 2015 MedGen:CN517202 not provided germline 13 32339006 AAAGTGAAAAACCTTTTTGATGAAAAAGAGCAAGGTACTAGTGAAATCACCAGTTTTAGCC 368796923 151096 NM_032043.2(BRIP1):c.1240C>T (p.Gln414Ter) BRIP1 Sep 25, 2017 MedGen:C1836860,OMIM:609054;MedGen:C0027672,SNOMED CT:699346009;Gene:6765,Human Phenotype Ontology:HP:0100615,MedGen:C0919267,OMIM:167000,SNOMED CT:123843001;MedGen:CN517202 Fanconi anemia, complementation group J;Hereditary cancer-predisposing syndrome;Neoplasm of ovary;not provided germline;unknown 17 61799200 GAATCAGCAAGTTACAGTGTAACAGAAGTTCAGCTTCGGTTTGCTCGGGATGAACTAGATA 886041251 264162 NM_003722.4(TP63):c.1027C>T (p.Arg343Trp) TP63 Jan 09, 2017 MedGen:CN517202 not provided germline 3 189868614 CAAGTCCTGGGCCGACGCTGCTTTGAGGCCCGGATCTGTGCTTGCCCAGGAAGAGACAGGA 118204008 16707 NM_000785.3(CYP27B1):c.1226C>T (p.Thr409Ile) CYP27B1 Jun 01, 2002 MedGen:C0268689,OMIM:264700,Orphanet:ORPHA289157,SNOMED CT:67049004 Vitamin D-dependent rickets, type 1 germline 12 57763798 TTTGTTTTCCTTTGCACCAGACGCTGGTCACTCTGTGTCACTATGCCACTTCAAGGGACCC 80338934 17522 NM_024577.3(SH3TC2):c.3325C>T (p.Arg1109Ter) SH3TC2 May 24, 2016 MedGen:C1866636,OMIM:601596,Orphanet:ORPHA99949;MedGen:CN517202 Charcot-Marie-Tooth disease, type 4C;not provided germline 5 149010272 CGCCACAGGCATCATGCAGTGGAGTACTACCGAGTAAGTCCAAGCTGTGCAGTTTGCTGAG -1 427639 NM_020699.3(GATAD2B):c.1429C>T (p.Gln477Ter) GATAD2B Jul 08, 2016 MedGen:C3554448,OMIM:615074,Orphanet:ORPHA363686 Mental retardation, autosomal dominant 18 germline 1 153812123 TGATGTGATGACTCCCAACAGGAAATTGAACAGCGATTACAGCAGCAGGCAGCCCTCTCCC 515726220 132059 NM_000406.2(GNRHR):c.842C>T (p.Thr281Ile) GNRHR Sep 01, 2012 Human Phenotype Ontology:HP:0000044,MedGen:C0271623,OMIM:146110,Orphanet:ORPHA181387,SNOMED CT:33927004 Hypogonadotropic hypogonadism 7 with or without anosmia germline 4 67740625 CATTTGCCACTTCATTTACTGTCTGCTGGACTCCCTACTATGTCCTAGGAATTTGGTATTG -1 456069 NM_004415.3(DSP):c.3133C>T (p.Arg1045Ter) DSP Mar 16, 2017 MedGen:C1843896,OMIM:607450 Arrhythmogenic right ventricular cardiomyopathy, type 8 germline 6 7579323 GAAGTTTTGGAAGAGGAGCTCAGACTGGCCCGAGATGCCAACTCGGAAAACTGTAATAAGA 1057519303 361820 NM_001128608.1(MAPKBP1):c.592C>T (p.Arg198Ter) MAPKBP1 May 22, 2017 MedGen:CN781300,OMIM:617271 Nephronophthisis 20 germline 15 41812609 GATTGCAGCTACTTTGTCACTGCAGGCAACCGACACATCAAATTCTGGTATCTCGATGACA 121434449 22374 NM_005144.4(HR):c.1837C>T (p.Arg613Ter) HR Aug 01, 1999 MedGen:C1859592,OMIM:209500,Orphanet:ORPHA86819 Atrichia with papular lesions germline 8 22123727 TGCCACCATGGACTCTTCAACACCCACTGGCGATGTCCCCGCTGCAGCCACCGGCTGTGTG 121918341 17544 NM_012431.2(SEMA3E):c.2108C>T (p.Ser703Leu) SEMA3E Jul 01, 2004 MedGen:C0265354,OMIM:214800,Orphanet:ORPHA138,SNOMED CT:47535005 CHARGE association germline 7 83367806 GGATGCCTTGTCCTGCTCAGAGTAGCATCTCGCAGGGAGCAAAACCATGGTACAAGGAATT 137852552 24911 NM_000451.3(SHOX):c.583C>T (p.Arg195Ter) SHOX Aug 18, 2011 MedGen:C1845118,OMIM:300582,Orphanet:ORPHA314795 Short stature, idiopathic, X-linked germline X 641037 TTGGGCACAGCCAACCACCTAGACGCCTGCCGAGTGGCACCCTACGTCAACATGGGAGCCT 587777743 166022 NM_001134665.2(TRMT10A):c.379C>T (p.Arg127Ter) TRMT10A Oct 01, 2013 MedGen:C4014997,OMIM:616033 Microcephaly, short stature, and impaired glucose metabolism 1 germline 4 99557386 GACATTAAGAAACTTCATAAGCAGATTCAACGATGTTACGCAGAAAACCGACGGGCACTGC 121908882 21495 NM_000369.2(TSHR):c.928C>T (p.Arg310Cys) TSHR Sep 19, 2013 MedGen:C3493776,OMIM:275200;MedGen:CN169374 Hypothyroidism, congenital, nongoitrous, 1;not specified germline 14 81142986 ATGTGTAATGAGAGCAGTATGCAGAGCTTGCGCCAGAGAAAATCTGTGAATGCCTTGAATA -1 437722 NM_000475.4(NR0B1):c.844C>T (p.Gln282Ter) NR0B1 Sep 26, 2017 MedGen:C0342482,OMIM:300200,SNOMED CT:237764004 Congenital adrenal hypoplasia, X-linked germline X 30308520 TTGCCCTGCTTCCAGGTGCTGCCCCTGGACCAGCAGCTGGTGCTGGTGCGCAACTGCTGGG 118204043 15544 NM_001010892.2(RSPH4A):c.1468C>T (p.Arg490Ter) RSPH4A May 27, 2017 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244;MedGen:C2675229,OMIM:612649 Ciliary dyskinesia;Ciliary dyskinesia, primary, 11 germline 6 116628175 GAGAGTAATTATTTACGAGCACAAATTGCCCGAATTTCAGCAGGAACCCACGTCAGTCCTC 372250159 188077 NM_198994.2(TGM6):c.331C>T (p.Arg111Cys) TGM6 Oct 21, 2014 MedGen:C3888031,OMIM:613908 Spinocerebellar ataxia 35 germline 20 2395343 CTCGCCAGCCCTCCCAGTGCTGTCATTGGCCGCTACCTGCTGAGCATCAGGCTTTCCTCTC 540217942 247511 NM_003504.4(CDC45):c.469C>T (p.Arg157Cys) CDC45 Oct 20, 2016 MedGen:C4310738,OMIM:617063 Meier-gorlin syndrome 7 germline 22 19483988 GACAGTGATGGGTCAGAGCCTTCTGAGAAGCGCACACGGTTAGAAGAGGTGAGTTTGGGTC 119477055 19719 NM_174916.2(UBR1):c.1537C>T (p.Gln513Ter) UBR1 Dec 01, 2005 MedGen:C0175692,OMIM:243800,SNOMED CT:75979009 Johanson-Blizzard syndrome germline 15 43048394 CGATCTTTTTTGAAGATTCTTACCTGTATGCAGGTATGATCATTTTTCTGTACATCAGTAA 1057517195 357983 NM_000543.4(SMPD1):c.557C>T (p.Pro186Leu) SMPD1 May 01, 2017 MedGen:C0268242,OMIM:257200,Orphanet:ORPHA77292,SNOMED CT:52165006;MedGen:C0268243,OMIM:607616,Orphanet:ORPHA77293,SNOMED CT:39390005 Niemann-Pick disease, type A;Niemann-Pick disease, type B germline;unknown 11 6391622 GGAACATCTCTTTGCCTACTGTGCCGAAGCCGCCCCCCAAACCCCCTAGCCCCCCAGCCCC -1 481487 NM_005149.2(TBX19):c.568C>T (p.Gln190Ter) TBX19 Oct 27, 2017 Human Phenotype Ontology:HP:0011748,MedGen:C0342388,OMIM:201400,SNOMED CT:237692001 ACTH deficiency germline 1 168293243 ATGGTAACAAACTGCTCCTTCCCTGAAACCCAGTTCATAGCCGTGACTGCCTATCAGAATG 768922431 182452 NM_000038.5(APC):c.6709C>T (p.Arg2237Ter) APC Feb 20, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline 5 112842303 GGCAGGACAATGATTCATATTCCAGGAGTTCGAAATAGCTCCTCAAGTACAAGTCCTGTTT 121912947 32163 NM_080680.2(COL11A2):c.3100C>T (p.Arg1034Cys) COL11A2 Dec 01, 1999 MedGen:C1866095,OMIM:601868 Deafness, autosomal dominant 13 germline 6 33171763 GGATCAGGGGGACCCATTGGTCCGCCAGGGCGCCCAGGCCCGCAGGGTCCCCCTGGAGCAG 121917720 28820 NM_006194.3(PAX9):c.139C>T (p.Arg47Trp) PAX9 Nov 01, 2007 MedGen:C1970291,OMIM:604625 Tooth agenesis, selective, 3 germline 14 36663031 ATCCGACCGTGTGACATCAGCCGCCAGCTACGGGTCTCGCACGGCTGCGTCAGCAAGATCC 386834152 71372 NM_025114.3(CEP290):c.1984C>T (p.Gln662Ter) CEP290 Feb 23, 2015 MedGen:C1857780,OMIM:610188;MedGen:C1970161,OMIM:611134 Joubert syndrome 5;Meckel syndrome type 4 unknown 12 88114488 AAAGAAATATTGCAAGCAATTAAGGAAATGCAGAAAGATCCTGATGTTAAAGGAGGAGAAA 886037684 248861 NM_177438.2(DICER1):c.2062C>T (p.R688*) DICER1 Aug 23, 2017 MedGen:CN072455,OMIM:601200;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 DICER1-related pleuropulmonary blastoma cancer predisposition syndrome;Hereditary cancer-predisposing syndrome;not provided germline;maternal 14 95112226 TATTTTCAGGGTCCACCAATGAGCTGTGTACGATTGGCTGAAAGAGTTGTAGCTCTCATTT 281875326 38539 NM_001614.3(ACTG1):c.464C>T (p.Ser155Phe) ACTG1 Sep 17, 2015 MedGen:C3281235,OMIM:614583;MedGen:CN517202 Baraitser-Winter Syndrome 2;not provided germline 17 81511526 CTGGGCGCACCACTGGCATTGTCATGGACTCTGGAGACGGGGTCACCCACACGGTGCCCAT 139004722 39503 NM_004278.3(PIGL):c.652C>T (p.Gln218Ter) PIGL Apr 06, 2012 MedGen:C1848392,OMIM:280000,Orphanet:ORPHA3474 Zunich neuroectodermal syndrome germline 17 16317900 CTCTTCGTGCTCAACAGCAAAGAAGTGGCACAGGCCAAGGTGAGGATTGTAAATTCCTGGA 727503057 175988 NM_000138.4(FBN1):c.1879C>T (p.Arg627Cys) FBN1 Jul 24, 2017 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:CN118826,Orphanet:ORPHA91387 Marfan syndrome;Marfan syndrome;Thoracic aortic aneurysm and aortic dissection germline 15 48505106 TGTGAAACCCCTGGGATCTGCATGAATGGGCGTTGCGTCAACACTGATGGCTCCTACAGAT 13297509 15436 NM_019892.5(INPP5E):c.1543C>T (p.Arg515Trp) INPP5E Sep 01, 2009 MedGen:CN119531,OMIM:213300 Joubert syndrome 1 germline 9 136431830 CTGCAGCACGACCAGCTCATCCGGGAGATGCGGAAAGGTGAGGGCCTGGGGGGGCGGGCAT 80357318 46112 NM_007294.3(BRCA1):c.3937C>T (p.Gln1313Ter) BRCA1 Oct 10, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline 17 43091594 TTGGAAGACTTGACTGCAAATACAAACACCCAGGATCCTTTCTTGATTGGTTCTTCCAAAC 794728197 197747 NM_000138.4(FBN1):c.2806C>T (p.Gln936Ter) FBN1 May 28, 2014 MedGen:CN517202 not provided germline 15 48492509 TGTGTTAACACTAGGGGGTCATTCAAGTGTCAGTGTCCCAGTGGAATGACTTTGGATGCCA 886041621 263969 NM_020699.3(GATAD2B):c.346C>T (p.Arg116Ter) GATAD2B Oct 04, 2016 MedGen:CN517202 not provided germline 1 153819725 TTTTTCCCTTTCTTGTCTAGTGAGCCAGAGCGAGGAAGGCTAACTCCCTCACCAGACATCA -1 439708 NM_005956.3(MTHFD1):c.806C>T (p.Thr269Ile) MTHFD1 Nov 21, 2017 MedGen:CN635903,OMIM:617780 COMBINED IMMUNODEFICIENCY AND MEGALOBLASTIC ANEMIA WITH OR WITHOUT HYPERHOMOCYSTEINEMIA germline 14 64424882 ACGAGGCCAAAGAGAGGGCGAGCTTCATCACTCCTGTTCCTGGCGGCGTAGGGCCCATGAC 121909125 22678 NM_003240.4(LEFTY2):c.940C>T (p.Arg314Ter) LEFTY2 Mar 01, 1999 MedGen:C1866091 Left-right axis malformations germline 1 225937602 CTGGCCTTCAATTGGCCATTTCTGGGGCCGCGACAGTGTATCGCCTCGGAGACTGCCTCGC 121909115 22514 NM_004425.3(ECM1):c.157C>T (p.Arg53Ter) ECM1 Mar 01, 2003 MedGen:C0023795,OMIM:247100,Orphanet:ORPHA530,SNOMED CT:38692000 Lipid proteinosis germline 1 150509696 TACGCAGCTCCCCCCTCCCCACCCCTATCCCGAAGCCTCCCCATGGATCACCCTGACTCCT 137852250 25642 NM_000133.3(F9):c.892C>T (p.Arg298Ter) F9 Apr 01, 1989 MedGen:C0008533,OMIM:306900,Orphanet:ORPHA98879,SNOMED CT:41788008 Hereditary factor IX deficiency disease germline X 139561577 GAACATACAGAGCAAAAGCGAAATGTGATTCGAATTATTCCTCACCACAACTACAATGCAG 137854560 15383 NM_000267.3(NF1):c.4084C>T (p.Arg1362Ter) NF1 Jul 25, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Neurofibromatosis, type 1;not provided germline;somatic;unknown 17 31249093 AGTTCCTCCTCAGAATTCCCCCCTCAACTTCGAAGTGTGTGCCACTGTTTATACCAGGTAT 864622615 222156 NM_130799.2(MEN1):c.1213C>T (p.Gln405Ter) MEN1 Nov 03, 2017 MeSH:D018761,MedGen:C0025267,OMIM:131100,Orphanet:ORPHA652,SNOMED CT:30664006;MedGen:CN517202;MedGen:CN169374 Multiple endocrine neoplasia, type 1;not provided;not specified germline 11 64805171 CAGGGCACCCAGAGCCAAGGTTCCGCCCTCCAGGACCCTGAGTGCTTCGCCCACCTGCTGC 398123701 100040 NM_003482.3(KMT2D):c.10819C>T (p.Gln3607Ter) KMT2D May 09, 2013 MedGen:CN030661,OMIM:147920 Kabuki syndrome 1 germline 12 49033886 AACAAGCAGCAGCAACAACAGCAGCAGCAGCAGCAACAACAGCAACAGCACTCAGCTGTGC 773356478 434977 NM_000059.3(BRCA2):c.2581C>T (p.Gln861Ter) BRCA2 May 27, 2016 MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009 Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome germline 13 32336936 TTCAACCAAAACACAAATCTAAGAGTAATCCAAAAAAATCAAGAAGAAACTACTTCAATTT 121909658 31282 NM_000145.3(FSHR):c.566C>T (p.Ala189Val) FSHR Jan 01, 2002 MedGen:C0949595,OMIM:233300 Ovarian dysgenesis 1 germline 2 48983125 AGAATGGGATTCAAGAAATACACAACTGTGCATTCAATGGAACCCAACTAGATGAGCTGTA 63749824 33196 NM_000021.3(PSEN1):c.236C>T (p.Ala79Val) PSEN1 Jul 12, 2017 MedGen:C3151038,OMIM:613737;MedGen:C1843013,OMIM:607822;MedGen:C1843013,OMIM:607822;Human Phenotype Ontology:HP:0002145,MedGen:C0338451,OMIM:600274,Orphanet:ORPHA282,SNOMED CT:230270009;MedGen:C0236642,OMIM:172700,SNOMED CT:13092008;MedGen:CN517202 Acne inversa, familial, 3;Alzheimer disease, type 3;Alzheimer disease, type 3;Frontotemporal dementia;Pick's disease;not provided germline 14 73170945 AAGATGAGGAGCTGACATTGAAATATGGCGCCAAGCATGTGATCATGCTCTTTGTCCCTGT 765123255 181726 NM_001128425.1(MUTYH):c.325C>T (p.Arg109Trp) MUTYH Sep 15, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C3272841;MedGen:C1837991,OMIM:608456,Orphanet:ORPHA247798;MedGen:CN517202 Hereditary cancer-predisposing syndrome;MUTYH-associated polyposis;MYH-associated polyposis;not provided germline;unknown 1 45333436 AGCCTGCTAAGCTGGTACGACCAAGAGAAACGGGACCTACCATGGAGAAGACGGGTAGGCA 886037626 32074 NM_004004.5(GJB2):c.-260C>T GJB2 Nov 01, 2007 MedGen:C2673759,OMIM:220290 Deafness, autosomal recessive 1A germline 13 20193020 GAGGCCGGGCGCGCTCCGCCCGCGGCGCCGCCCCCTCCGTAACTTTCCCAGTCTCCGAGGG 121434331 16724 NM_000528.3(MAN2B1):c.2278C>T (p.Arg760Ter) MAN2B1 Mar 02, 2017 MedGen:C0024748,OMIM:248500,Orphanet:ORPHA61,SNOMED CT:124466001 Deficiency of alpha-mannosidase germline;unknown 19 12649418 CAGCTCACCCCCAACCCCAGGCGGGATTATCGACCCACCTGGAAACTGAACCAGACGGAGC 63750245 45223 NM_000251.2(MSH2):c.1030C>T (p.Gln344Ter) MSH2 Sep 05, 2013 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Lynch syndrome germline 2 47416383 AAAACCCCTCAAGGACAAAGACTTGTTAACCAGTGGATTAAGCAGCCTCTCATGGATAAGA -1 453942 NM_002448.3(MSX1):c.661C>T (p.Gln221Ter) MSX1 Sep 29, 2016 MedGen:C0406735,OMIM:189500,Orphanet:ORPHA2228,SNOMED CT:400036004 Hypoplastic enamel-onycholysis-hypohidrosis syndrome germline 4 4862892 CTCACTGAGACGCAGGTGAAGATATGGTTCCAGAACCGCCGCGCCAAGGCAAAGAGACTAC 879253926 244485 NM_014845.5(FIG4):c.1207C>T (p.Gln403Ter) FIG4 Apr 29, 2015 MedGen:CN517202 not provided germline 6 109760319 GAACTTGTTGCTGCTGTGACCTATCTCAACCAATTTTTGCCTCCTGAGCACACTATTGTTT 121912985 31892 NM_014208.3(DSPP):c.133C>T (p.Gln45Ter) DSPP Feb 01, 2001 MedGen:C0205730,OMIM:125490,SNOMED CT:234969005 Dentinogenesis imperfecta - Shield's type II germline 4 87612186 CATCTCCTAGCAAGATCAAATGTGTCAGTACAGGTATAGGATGTAATATATTTCATTTTAT 587783392 168715 NM_018249.5(CDK5RAP2):c.5227C>T (p.Gln1743Ter) CDK5RAP2 Mar 06, 2013 MedGen:C1858108,OMIM:604804 Primary autosomal recessive microcephaly 3 germline 9 120402886 GACTATGAGGCCCTGCTCAAACAGATCAGCCAGGGACAGAGGCTCCTTGCTGAAATGGACA 587777038 76352 NM_052867.3(NALCN):c.1924C>T (p.Gln642Ter) NALCN Aug 01, 2013 MedGen:C3809454,OMIM:615419 Hypotonia, infantile, with psychomotor retardation and characteristic facies 1 germline 13 101144812 CGAATCTTTGAAAAATTTCCAAACAGACCTCAAATGGTGAAAATCTCAAAGCTTCCTTCAG 121913021 31824 NM_000400.3(ERCC2):c.1972C>T (p.Arg658Cys) ERCC2 Mar 01, 2001 MedGen:C1866504,OMIM:601675 Trichothiodystrophy 1, photosensitive germline 19 45352580 GAGAATGACTTTCTTACCTTCGATGCCATGCGCCACGCGGCCCAGTGTGTGGGTCGGGCCA 387907044 39853 NM_198525.2(KIF7):c.460C>T (p.Arg154Ter) KIF7 Jun 01, 2011 Gene:46,MedGen:C0796147,OMIM:200990,Orphanet:ORPHA36 Acrocallosal syndrome, Schinzel type germline 15 89649810 TCCTACCTGGAAGTGTACAAGGAGGAGTTCCGAGACCTGCTCGAGGTGGGCACTGCCAGCC 762521317 359154 NR_033426.1(ACAD9):n.887C>T ACAD9 Dec 12, 2016 MedGen:C1970173,OMIM:611126,Orphanet:ORPHA99901 Acyl-CoA dehydrogenase family, member 9, deficiency of germline 3 128896491 AGCAGAAAGCCAAATACTTGCCTAAACTGGCGTCCGGGGAGCACATTGCAGCCTTCTGCCT 886038080 248943 NM_000059.3(BRCA2):c.2905C>T (p.Gln969Ter) BRCA2 Jun 22, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome germline 13 32337260 GTAAAGCAGCATATAAAAATGACTCTAGGTCAAGATTTAAAATCGGACATCTCCTTGAATA 121434368 17123 NM_000159.3(GCDH):c.1247C>T (p.Thr416Ile) GCDH Nov 01, 1996 MedGen:C0268595,OMIM:231670,Orphanet:ORPHA25,SNOMED CT:360416003,SNOMED CT:76175005 Glutaric aciduria, type 1 germline 19 12899471 AACCGACTCTGTATTAATCTTGTCCAGGTACACATGACATTCACGCCCTGATCCTTGGGAG 587784396 167991 NM_006516.2(SLC2A1):c.748C>T (p.Gln250Ter) SLC2A1 Jan 10, 2014 MedGen:CN030711,OMIM:606777;MedGen:CN517202 GLUT1 deficiency syndrome 1;not provided germline 1 42929712 GACCTGCAGGAGATGAAGGAAGAGAGTCGGCAGATGATGCGGGAGAAGAAGGTCACCATCC 58912633 29549 NM_170707.3(LMNA):c.428C>T (p.Ser143Phe) LMNA Dec 01, 2007 MedGen:C2750785,OMIM:613205,Orphanet:ORPHA157973;MedGen:CN517202 Congenital muscular dystrophy, LMNA-related;not provided germline 1 156130688 GGCTGAAGGACCTGGAGGCTCTGCTGAACTCCAAGGAGGCCGCACTGAGCACTGCTCTCAG 119479064 19749 NM_006031.5(PCNT):c.8752C>T (p.Arg2918Ter) PCNT Feb 08, 2008 MedGen:C0432246,OMIM:210720,Orphanet:ORPHA2637 Microcephalic osteodysplastic primordial dwarfism type 2 germline 21 46435904 TCTTCTCTGTCTTTTTTCTGTTAACAACAGCGAGAATTAGAACTGCAGCGTCAGCGTGACT 768703749 214895 NM_000282.3(PCCA):c.1426C>T (p.Arg476Ter) PCCA Jan 01, 2012 Human Phenotype Ontology:HP:0003353,MedGen:C0268579,OMIM:606054,Orphanet:ORPHA35 Propionic acidemia germline 13 100309905 ATGGCAGATGCACTGGATAACTATGTTATTCGAGGTAAAAACAAAGATTTGCACTCGTTGG -1 482257 NM_007075.3(WDR45):c.577C>T (p.Gln193Ter) WDR45 Oct 18, 2017 MedGen:CN517202 not provided germline X 49075696 TCGTCTGCTCCATTCACGATCAATGCACATCAGAGTGACATAGCCTGTGTGTCTCTAAACC 587784346 169770 NM_003560.3(PLA2G6):c.2098C>T (p.Gln700Ter) PLA2G6 Feb 08, 2013 Human Phenotype Ontology:HP:0012675,MedGen:C4021076 Iron accumulation in brain germline 22 38113591 GTTGTCTCCCTGGGGACAGGGAGGTCCCCACAAGTGCCTGTGACCTGTGTGGATGTCTTCC -1 427641 NM_020699.3(GATAD2B):c.535C>T (p.Arg179Ter) GATAD2B Dec 01, 2015 MedGen:C3554448,OMIM:615074,Orphanet:ORPHA363686 Mental retardation, autosomal dominant 18 germline 1 153818853 CTGAGGGATGAGCTACGATTGGAAGAAGCCCGACTGGTCCTGTTAAAGAAACTGAGACAGA -1 431326 NM_012160.4(FBXL4):c.292C>T (p.Arg98Ter) FBXL4 Aug 10, 2017 MedGen:C3809592,OMIM:615471,Orphanet:ORPHA369897 Mitochondrial DNA depletion syndrome 13 (encephalomyopathic type) germline 6 98926697 TCTGGTGACTTTACTCAGACAGCTGTGTTTCGAACTTATGGGACATGGTGGGATCAGTGTC 119473034 19211 NM_014140.3(SMARCAL1):c.49C>T (p.Arg17Ter) SMARCAL1 Feb 01, 2002 MedGen:C0877024,OMIM:242900,Orphanet:ORPHA1830 Schimke immunoosseous dysplasia germline 2 216414753 GAGGAGCAGAGGAAAAAGATTGAAGAGAATCGACAAAAGGCTCTGGCCCGCAGAGCTGAGA -1 481644 NM_004238.2(TRIP12):c.3811C>T (p.Gln1271Ter) TRIP12 Nov 24, 2017 MedGen:CN517202 not provided germline 2 229793078 TTCAACACACATCAATTAAAATGCCAGTTACAAAGGCATCCAGACTGTGCAAATGTGAAGC 1057524408 379411 NM_001145408.1(NONO):c.103C>T (p.Gln35Ter) NONO Jan 19, 2017 MedGen:CN517202 not provided germline X 71290740 CAGCAGCAGCACCACCAGCAGCAACAGCAGCAGCCGCCACCACCGCCAATACCTGCAAATG 74315373 20994 NM_006996.2(SLC19A2):c.484C>T (p.Arg162Ter) SLC19A2 Jul 01, 1999 MedGen:C0342287,OMIM:249270,Orphanet:ORPHA49827,SNOMED CT:237617006 Megaloblastic anemia, thiamine-responsive, with diabetes mellitus and sensorineural deafness germline 1 169477478 GGCATGTACCAGAAAGTCACAAGTTACTGTCGAAGTGCCACTTTGGTGGGCTTTACAGTGG 886037802 226173 NM_000059.3(BRCA2):c.5206C>T (p.Gln1736Ter) BRCA2 Jun 21, 2017 MedGen:C0677776,Orphanet:ORPHA145;Human Phenotype Ontology:HP:0100013,MeSH:D001943,MedGen:C1458155,Orphanet:ORPHA180250,SNOMED CT:126926005 Hereditary breast and ovarian cancer syndrome;Neoplasm of the breast germline 13 32339561 GAAAATGACAAAAATCATCTCTCCGAAAAACAAGATACTTATTTAAGTAACAGTAGCATGT 74315510 20717 NM_001169109.1(SCO2):c.157C>T (p.Gln53Ter) SCO2 May 02, 2013 MedGen:C1858424,OMIM:604377,Orphanet:ORPHA1561;MedGen:C1837148,OMIM:608908 Cardioencephalomyopathy, fatal infantile, due to cytochrome c oxidase deficiency;Myopia 6 germline 22 50524255 CCTGCAGAGACAGGTGGGCAGGGCCAGCCCCAGGGCCCTGGGCTTCGAACCCGGCTGCTGA 104894799 26523 NM_006579.2(EBP):c.187C>T (p.Arg63Ter) EBP Jul 01, 1999 MedGen:C0282102,OMIM:302960,Orphanet:ORPHA35173 Chondrodysplasia punctata 2 X-linked dominant germline X 48523958 GCTGCGGTTGTCCCATTGGGGACTTGGCGGCGACTGTCCCTGTGCTGGTTTGCAGTGTGTG 118204049 15788 NM_015346.3(ZFYVE26):c.4312C>T (p.Arg1438Ter) ZFYVE26 Nov 02, 2016 MedGen:C1849128,OMIM:270700,Orphanet:ORPHA100996 Spastic paraplegia 15 germline;unknown 14 67782840 CGGGCCCTTCAGCTCACTGAAGTGTACGGGCGAGATGTGGACGATTTGAGCAGCATAAAGG 374322839 438534 NM_017807.3(OSGEP):c.838C>T (p.Arg280Cys) OSGEP Oct 26, 2017 MedGen:CN570505,OMIM:617729 GALLOWAY-MOWAT SYNDROME 3 germline 14 20447646 CAGGAGATGATGGCAACAATGTGCCAGGAACGTGGAGCCCGGCTTTTTGCTACAGATGAGA 794728228 197690 NM_000138.4(FBN1):c.4621C>T (p.Arg1541Ter) FBN1 Aug 01, 2017 MedGen:CN229799;MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:CN118826,Orphanet:ORPHA91387;MedGen:CN517202 Marfan Syndrome/Loeys-Dietz Syndrome/Familial Thoracic Aortic Aneurysms and Dissections;Marfan syndrome;Marfan syndrome;Thoracic aortic aneurysm and aortic dissection;not provided germline 15 48468064 TCTGGAAATTGCTATTTGGATATTCGACCTCGAGGAGACAATGGAGATACAGCCTGCAGCA 786205680 188158 NM_014423.3(AFF4):c.772C>T (p.Arg258Trp) AFF4 Aug 16, 2017 MedGen:C4085597,OMIM:616368,Orphanet:ORPHA444077;MedGen:CN517202 Chops syndrome;not provided germline 5 132934293 TCAATGTTACAGAAACCCACTGCCTATGTGCGGCCCATGGACGGACAGGAGTCCATGGAAC -1 478369 NM_000267.3(NF1):c.7702C>T (p.Gln2568Ter) NF1 Sep 13, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 17 31356986 GCAGAAACTCAGAGGATTTCCTCATCACAACAGCACCCACATTTACGTAAAGTTTCAGTGT 730881864 180279 NM_002485.4(NBN):c.2140C>T (p.Arg714Ter) NBN Oct 09, 2017 Gene:100310785,MedGen:C0023449,OMIM:613065,Orphanet:ORPHA513,SNOMED CT:91857003;Human Phenotype Ontology:HP:0001915,MedGen:C0002874,OMIM:609135,SNOMED CT:306058006;MedGen:C0027672,SNOMED CT:699346009;MedGen:C0398791,OMIM:251260,Orphanet:ORPHA647,SNOMED CT:234638009;MedGen:C0398791,OMIM:251260,Orphanet:ORPHA647,SNOMED CT:234638009;MedGen:CN517202 Acute lymphoid leukemia;Aplastic anemia;Hereditary cancer-predisposing syndrome;Microcephaly, normal intelligence and immunodeficiency;Microcephaly, normal intelligence and immunodeficiency;not provided germline;unknown 8 89943297 GGAGGATCAGATCTAATAGCTCATCATGCTCGAAAGAATACAGAACTAGAAGAGTGGCTAA 193922884 136830 NM_000540.2(RYR1):c.14645C>T (p.Thr4882Met) RYR1 Apr 19, 2017 MedGen:C0751951,OMIM:117000,Orphanet:ORPHA597,SNOMED CT:43152001;MedGen:CN517202 Central core disease;not provided germline;unknown 19 38580503 AACCTGACATGAAGTGTGATGACATGATGACGGTGAGCCCCTCCCCTAGCACTCTGGGACC 886041166 264409 NM_017780.3(CHD7):c.934C>T (p.Arg312Ter) CHD7 Aug 24, 2015 MedGen:CN517202 not provided germline 8 60742366 CCTACTATAAACAACTCAGGGCAGTATTCTCGATATCCTTACAGTAACCTAAATCAGGGAT 1085307451 414715 NM_138615.2(DHX30):c.2353C>T (p.Arg785Cys) DHX30 Dec 18, 2017 MedGen:CN703736,OMIM:617804;MedGen:CN517202 NEURODEVELOPMENTAL DISORDER WITH SEVERE MOTOR IMPAIRMENT AND ABSENT LANGUAGE;not provided de novo;germline 3 47848246 AATGTGATCCAGCGCCGGGGCCGGGCGGGCCGCTGCCAGTCCGGCTTTGCCTACCACTTGT 886037868 247748 NM_018014.3(BCL11A):c.154C>T (p.Gln52Ter) BCL11A Sep 08, 2016 MedGen:C4310833,OMIM:617101 Intellectual developmental disorder with persistence of fetal hemoglobin germline 2 60546202 GATCATGACCTCCTCACCTGTGGGCAGTGCCAGATGAACTTCCCATTGGGGGACATTCTTA 200440128 205749 NM_012160.4(FBXL4):c.64C>T (p.Arg22Ter) FBXL4 Nov 07, 2017 MedGen:C3809592,OMIM:615471,Orphanet:ORPHA369897;MedGen:CN517202 Mitochondrial DNA depletion syndrome 13 (encephalomyopathic type);not provided germline 6 98926925 ACCATGTTTTATTATATATGCCTTCGGCGCCGAGCCAGGACAGCTACAAGAGGAGAAATGA 121918542 21624 NM_002242.4(KCNJ13):c.484C>T (p.Arg162Trp) KCNJ13 Mar 01, 2013 MedGen:C1860405,OMIM:193230,Orphanet:ORPHA91496 Snowflake vitreoretinal degeneration germline 2 232768790 TATTTAGGTGCTTTTGTGGCGAAGATTGCCCGGCCAAAAAATCGAGCTTTTTCAATTCGCT 894292181 478042 NM_000267.3(NF1):c.1627C>T (p.Gln543Ter) NF1 Jun 02, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 17 31219104 GTCCCTCAGTCACACATGCCAGAGATTGCTCAGGAAGCAATGGAGGTAAGGGGAAAATGAA 398122978 97322 NM_024876.3(COQ8B):c.532C>T (p.Arg178Trp) COQ8B Jun 07, 2016 MedGen:C3809965,OMIM:615573 Nephrotic syndrome, type 9 germline 19 40705140 ATCAGCCCTCAGCTGCAGCACATCTTTGAGCGGGTCCGCCAGAGCGCCGACTTCATGCCCC 72549397 21635 NM_003742.2(ABCB11):c.3169C>T (p.Arg1057Ter) ABCB11 Dec 01, 1999 MedGen:C1866138,OMIM:601847 Progressive familial intrahepatic cholestasis 2 germline 2 168932421 TCAGCTGCACGCTTTTTTCAACTGCTGGACCGACAACCCCCAATCAGTGTATACAATACTG 1057519087 359167 NM_032793.4(MFSD2A):c.1016C>T (p.Ser339Leu) MFSD2A Jan 23, 2018 MedGen:C4225310,OMIM:616486 Primary autosomal recessive microcephaly 15 germline 1 39967632 CTTTAACCCCCTTTGTCCATCCACAGCTCTCGGCCACTTTAACCATTCCCATCTGGCAGTG 587776919 48091 NM_004826.3(ECEL1):c.1252C>T (p.Arg418Cys) ECEL1 Feb 04, 2013 MedGen:C3554415,OMIM:615065,Orphanet:ORPHA329457;MedGen:C3554415,OMIM:615065,Orphanet:ORPHA329457 Arthrogryposis, distal, type 5d;Arthrogryposis, distal, type 5d germline;inherited 2 232484156 GTCCTGAGTGAACACCTGTCCCCGCCATTCCGTGAGGCACTGCACGAGCTGGCACAGGAGA 786204777 187126 NM_005682.6(ADGRG1):c.10C>T (p.Gln4Ter) ADGRG1 Apr 17, 2014 MedGen:C1847352,OMIM:606854,Orphanet:ORPHA101070 Polymicrogyria, bilateral frontoparietal germline 16 57650297 GAGTGACTCCGTCGGAGGAAAATGACTCCCCAGTCGCTGCTGCAGACGACACTGTTCCTGC 587779815 132794 NM_000051.3(ATM):c.1339C>T (p.Arg447Ter) ATM Jul 29, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Ataxia-telangiectasia syndrome;Hereditary cancer-predisposing syndrome;not provided germline;unknown 11 108250804 ATGATACTATCTCAGCTTCTACCCCAACAGCGACATGGGGAACGTACACCATATGTGTTAC 145166656 415494 NM_000293.2(PHKB):c.307C>T (p.Arg103Ter) PHKB Mar 24, 2017 MedGen:CN517202 not provided germline 16 47502992 TAGTTTCATGAGTTATCTCTCTCACCCAGGCGAATTGATGATGACAAGGGAAGGACCCATG 121918173 15933 NM_000181.3(GUSB):c.1144C>T (p.Arg382Cys) GUSB Jan 13, 2013 MedGen:C0085132,OMIM:253220,Orphanet:ORPHA584;MedGen:C0455988,OMIM:236750,Orphanet:ORPHA363999,SNOMED CT:276509008 Mucopolysaccharidosis type VII;Non-immune hydrops fetalis germline 7 65974626 CTGCTTCGCTGGCTTGGTGCCAACGCTTTCCGTACCAGCCACTACCCCTATGCAGAGGAAG 1057516077 354031 NM_172107.3(KCNQ2):c.341C>T (p.Thr114Ile) KCNQ2 Mar 31, 2016 MedGen:C3150986,OMIM:613720,Orphanet:ORPHA439218 Early infantile epileptic encephalopathy 7 germline 20 63446793 TCTCCTGCCTCGTGCTGTCTGTGTTTTCCACCATCAAGGAGTATGAGAAGAGCTCGGAGGG 864309691 213992 NM_021954.3(GJA3):c.176C>T (p.Pro59Leu) GJA3 Apr 04, 2017 Human Phenotype Ontology:HP:0000519,MedGen:C1842324;MedGen:C1866078,OMIM:601885 Congenital cataract;Zonular pulverulent cataract 3 germline;unknown 13 20143113 AGTCAGACTTCACCTGCAACACCCAGCAGCCGGGCTGCGAGAACGTCTGCTACGACAGGGC 587778894 95146 NM_000249.3(MLH1):c.1171C>T (p.Gln391Ter) MLH1 Jul 07, 2015 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Lynch syndrome germline 3 37025769 CACCAGATGGTTCGTACAGATTCCCGGGAACAGAAGCTTGATGCATTTCTGCAGCCTCTGA 794727903 195881 NM_000350.2(ABCA4):c.880C>T (p.Gln294Ter) ABCA4 Oct 10, 2014 MedGen:C1858806,OMIM:604116;MeSH:C535804,MedGen:C1855465,OMIM:248200 Cone-rod dystrophy 3;Stargardt disease 1 germline 1 94080697 TTGCCCTAGTTTATCCATCGGCCGAGTATGCAGGACTTGCTGTGGGTGACCAGGCCCCTCA 45517119 58573 NM_000548.4(TSC2):c.658C>T (p.Gln220Ter) TSC2 Jul 21, 2017 MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000;MedGen:CN517202 Tuberous sclerosis syndrome;not provided germline 16 2056653 AGCCGTCTCCCTCTCCACCAGGTCTCCCTGCAGGTGCTGGACGCCGTGGTCTGCTACAACT 869312748 226241 NM_016343.3(CENPF):c.9280C>T (p.Arg3094Ter) CENPF Aug 25, 2017 MedGen:C1855705,OMIM:243605,OMIM:616369 Stromme syndrome germline 1 214663729 CCCAGAGAGGGCCTGAGGGTCAAGCGAGGCCGACTTGTCCCCAGCCCCAAAGCTGGACTGG 587780088 133302 NM_001128425.1(MUTYH):c.55C>T (p.Arg19Ter) MUTYH Aug 23, 2017 MedGen:C0699790,OMIM:114500,SNOMED CT:269533000;MedGen:C0027672,SNOMED CT:699346009;MedGen:C1837991,OMIM:608456,Orphanet:ORPHA247798;MedGen:CN517202 Carcinoma of colon;Hereditary cancer-predisposing syndrome;MYH-associated polyposis;not provided germline 1 45334493 TTTTTGTTTCAGGCCATCATGAGGAAGCCACGAGCAGCCGTGGGAAGTGGTCACAGGAAGC 61753046 105365 NM_000350.2(ABCA4):c.6658C>T (p.Gln2220Ter) ABCA4 Jan 03, 2018 Human Phenotype Ontology:HP:0000548,MedGen:C0730290;MeSH:C535804,MedGen:C1855465,OMIM:248200;MedGen:CN517202 Cone/cone-rod dystrophy;Stargardt disease 1;not provided germline;unknown 1 93997932 GTCTCCTCCTCCTCCCTGGCGAGGATCTTCCAGCTCCTCCTCTCCCACAAGGACAGCCTGC -1 427093 NM_001171.5(ABCC6):c.61C>T (p.Pro21Ser) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16221807 CCTCAGGTCTGGAACCAGACAGAGCCTGAACCTGCCGCCACCAGCCTGCTGAGCCTGTGCT 1057515421 223685 NM_005572.3(LMNA):c.1228C>T (p.Gln410Ter) LMNA Jan 01, 2015 MedGen:C1449563,OMIM:115200,Orphanet:ORPHA300751 Dilated cardiomyopathy 1A germline 1 156136284 GGCCGTGCTTCCTCTCACTCATCCCAGACACAGGGTGGGGGCAGCGTCACCAAAAAGCGCA 119489102 20463 NM_016938.4(EFEMP2):c.835C>T (p.Arg279Cys) EFEMP2 May 12, 2011 MedGen:C3280798,OMIM:614437;MedGen:CN033664,OMIM:219100 Autosomal recessive cutis laxa type 1B;Autosomal recessive cutis laxa type IA germline 11 65868522 TGCCCACAGGGTTACCAGCTGCTGGCCACACGCCTCTGCCAAGGTACAGGTTGCCCGGGTG 1085307472 414991 NM_005859.4(PURA):c.163C>T (p.Gln55Ter) PURA May 01, 2017 MedGen:CN517202 not provided germline 5 140114344 GGCGGCGGCGGCGGGGCCCCAGGGGGGCTGCAGCACGAGACGCAGGAGCTGGCCTCCAAGC 794729281 199078 NM_001256850.1(TTN):c.64327C>T (p.Arg21443Ter) TTN May 02, 2014 MedGen:CN517202 not provided germline 2 178577085 TCCTATATACTTGAAAAGAGAGAAACCAGCCGACTTTTGTGGACAGTGGTTTCTGAAGATA 121908026 18725 NM_000527.4(LDLR):c.530C>T (p.Ser177Leu) LDLR Oct 19, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000;MedGen:CN118841;MedGen:CN517202 Familial hypercholesterolemia;Familial hypercholesterolemias;not provided germline;inherited;not applicable 19 11105436 GCGACAACGACCCCGACTGCGAAGATGGCTCGGATGAGTGGCCGCAGCGCTGTAGGGGTCT 368278927 434170 NM_000384.2(APOB):c.10700C>T (p.Thr3567Met) APOB - MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 2 21006168 AACGCATATATTCCCTCTGGGAGCACAGTACGAAAAACCACTTACAGCTAGAGGGCCTCTT 148832260 243922 NM_022042.3(SLC26A1):c.1073C>T (p.Ser358Leu) SLC26A1 Jul 20, 2016 Human Phenotype Ontology:HP:0008672,MedGen:C1833683,OMIM:167030,SNOMED CT:444717006 Calcium oxalate urolithiasis germline 4 989866 TGGCCCTCGTGGCTGCCGCCTTCTCCATCTCGCTGGCGGAGATGTTCGCCCGCAGTCACGG 80357377 69340 NM_007294.3(BRCA1):c.2761C>T (p.Gln921Ter) BRCA1 Sep 08, 2016 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome germline 17 43092770 GGAAAGAATGAGTCTAATATCAAGCCTGTACAGACAGTTAATATCACTGCAGGCTTTCCTG 879253780 244081 NM_052965.3(TSEN15):c.346C>T (p.His116Tyr) TSEN15 Sep 26, 2016 MedGen:C4310757,OMIM:617026 Pontocerebellar hypoplasia, type 2f germline 1 184054856 GTGCCTACCCCCATCACTGCTTCCCTCAGCCATAACAGGTGAGCAGGTGATTTTGGTCTAA 151325121 39448 NM_173170.1(IL36RN):c.142C>T (p.Arg48Trp) IL36RN Sep 09, 2011 MedGen:C0343055,OMIM:614204,Orphanet:ORPHA247353 Pustular psoriasis, generalized germline 2 113062150 ACAGGTGAAGAGATCAGCGTGGTCCCCAATCGGTGGCTGGATGCCAGCCTGTCCCCCGTCA 886039547 259812 NM_006846.3(SPINK5):c.136C>T (p.Gln46Ter) SPINK5 Jul 19, 2016 MedGen:CN517202 not provided germline 5 148070377 TTTATGAAAAATGGAAAACTGTTCTGTCCCCAGGATAAGAAATTTTTTCAAAGTCTTGATG 80356547 24821 NM_003334.3(UBA1):c.1731C>T (p.Asn577=) UBA1 Sep 13, 2012 MedGen:C1844934,OMIM:301830,Orphanet:ORPHA1145 Arthrogryposis multiplex congenita, distal, X-linked germline X 47206103 CCTAGATGGCGTGGCCAATGCCCTGGACAACGTGGATGCCCGTGAGTTTGGAGGCGGGTGA 551472773 430596 NM_000487.5(ARSA):c.937C>T (p.Arg313Ter) ARSA Nov 02, 2016 MedGen:C0023522,OMIM:250100,Orphanet:ORPHA512,SNOMED CT:396338004 Metachromatic leukodystrophy germline 22 50626196 GGAAAGGGAACGACCTACGAGGGCGGTGTCCGAGAGCCTGCCTTGGCCTTCTGGCCAGGTC 999844958 453742 NM_172250.2(MMAA):c.1075C>T (p.Arg359Ter) MMAA Dec 22, 2016 MedGen:C1855109,OMIM:251100,Orphanet:ORPHA79310 Methylmalonic aciduria cblA type germline 4 145655252 ATGCTTGCCAGTGGGGAGCTGACTGCCAAACGACGGAAGCAACAGAAAGTTTGGATGTGGA 104893976 16736 NM_182548.3(LHFPL5):c.494C>T (p.Thr165Met) LHFPL5 Jul 01, 2006 MedGen:C1853223,OMIM:610265 Deafness, autosomal recessive 67 germline 6 35814627 GTGAGGTGCGGCGCATGTGTGGGGAGCAGACGGGCAAGTACACGCTGGGCCACTGCACCAT 886041844 264324 NM_024757.4(EHMT1):c.2704C>T (p.Arg902Ter) EHMT1 Jun 28, 2016 MedGen:CN517202 not provided germline 9 137800976 CTGCTGTCCAAGGGCTCTGACATCAACATCCGAGACAACGTAAGTTCGTCACACCCTCCCC 373909351 39735 NM_001023570.3(IQCB1):c.1465C>T (p.Arg489Ter) IQCB1 Jan 01, 2011 MedGen:C1836517,OMIM:609254 Senior-Loken syndrome 5 germline 3 121772659 AGTAGGGAGCTCCATGCCCAAGCTCAAGAACGACTGCAACACTACTTTATGGGCAGGGCCC 777751303 361523 NM_000435.2(NOTCH3):c.1819C>T (p.Arg607Cys) NOTCH3 Jul 31, 2016 MedGen:CN517202 not provided germline 19 15187126 TGCCTAGACCTGGTGGACAAGTACCTCTGCCGCTGCCCTTCTGGGACCACAGGTGGGACCG 115352435 249203 NM_133443.3(GPT2):c.1210C>T (p.Arg404Ter) GPT2 Sep 22, 2016 MedGen:C4225388,OMIM:616281,Orphanet:ORPHA477673 Mental retardation, autosomal recessive 49 germline 16 46922414 GCAGGAGAGGAGTCCTTTGAGCAATTCAGCCGAGTGAGTCCACTGTGATGCGTCTGCACCC 777696417 259620 NM_012134.2(LMOD1):c.1108C>T (p.Arg370Ter) LMOD1 Sep 15, 2016 MedGen:C1835084,OMIM:155310,Orphanet:ORPHA2241 Visceral myopathy inherited 1 201899905 GTGGTTAAGCTGTTCGCCTTGGCCAACACGCGAGCCGATGACCACGTGGCCTTTGCCATTG 118203908 15689 NM_000130.4(F5):c.2401C>T (p.Gln801Ter) F5 Jul 15, 2001 MedGen:C0015499,OMIM:227400,Orphanet:ORPHA326,SNOMED CT:4320005 Factor V deficiency germline 1 169542689 CTTGCAGAACCTCAGAAAGCCCCTTCTCACCAACAAGCCACCACAGCTGGTTCCCCACTGA 1085307410 414389 NM_000020.2(ACVRL1):c.853C>T (p.Leu285Phe) ACVRL1 - MedGen:C0152171,OMIM:178600,SNOMED CT:26174007 Primary pulmonary hypertension germline 12 51915305 CTCATCACGCACTACCACGAGCACGGCTCCCTCTACGACTTTCTGCAGAGACAGACGCTGG 121908390 20298 NM_015247.2(CYLD):c.2806C>T (p.Arg936Ter) CYLD Sep 23, 2016 MedGen:C1851526,OMIM:132700;MedGen:C1275122,OMIM:601606,Orphanet:ORPHA867,SNOMED CT:403825008;MedGen:C1857941,OMIM:605041,Orphanet:ORPHA79493 Cylindromatosis, familial;Familial multiple trichoepitheliomata;Spiegler-Brooke syndrome germline 16 50796443 TTGGACTCCAGGAGAATCCAAGGCTGTGCACGAAGACTGCTTTGTGATGCATATATGTGCA 773209126 237464 NM_000426.3(LAMA2):c.1303C>T (p.Arg435Ter) LAMA2 Aug 25, 2017 MedGen:CN117977;MedGen:CN517202 Laminin alpha 2-related dystrophy;not provided germline 6 129165672 GTCTGTGTCAAGGATGAGAAACATGCTCGACGAGGTGAGAGCTGCAGCAGAATGTCACTGC 587776966 59507 NM_024769.3(CLMP):c.664C>T (p.Arg222Ter) CLMP Jan 06, 2017 Human Phenotype Ontology:HP:0004389,MedGen:C0021847,OMIM:615237 Congenital short bowel syndrome germline;inherited 11 123083100 AACGAAGCTGGGAAGGAAAGCTGTGTGGTGCGAGTAACTGTACAGTGTAAGCATCCAAAGA 724159964 171925 NM_198271.4(LMOD3):c.1201C>T (p.Arg401Ter) LMOD3 Jan 05, 2015 MedGen:C4015360,OMIM:616165 Nemaline myopathy 10 germline 3 69119154 ACCAGGAATCAGGATAAACAAAGGCAGAAACGACAGGAAGAGCAAAAACAGCAGCAACTCA 606231226 31833 NM_001039350.2(DPP6):c.52-141059C>T DPP6 Apr 01, 2009 MedGen:C2751829,OMIM:612956 Ventricular fibrillation, paroxysmal familial, 2 germline 7 154305155 GGGCCGGGAGGCGGGCGAGGAGGCAGCGCGCATCACTCGGGTCCCCTTCCTGCACCCAGCC 797045003 205021 NM_001083962.1(TCF4):c.968C>T (p.Ala323Val) TCF4 May 19, 2014 MedGen:C1970431,OMIM:610954,Orphanet:ORPHA2896 Pitt-Hopkins syndrome de novo 18 55261488 GGGCAGCCGGCAGCTCCCAGACTGGAGATGCTCTGGGGAAAGCACTTGCTTCGGTGAGGAA 753160398 264637 NM_002693.2(POLG):c.2870C>T (p.Ala957Val) POLG May 26, 2016 MedGen:C0205710,OMIM:203700,Orphanet:ORPHA726,SNOMED CT:20415001;MedGen:CN517202 Progressive sclerosing poliodystrophy;not provided germline 15 89320877 AAATCTTCAACTACGGCCGCATCTATGGTGCTGGGCAGCCCTTTGCTGAGCGCTTACTAAT 864309547 215122 NM_001271.3(CHD2):c.4909C>T (p.Arg1637Ter) CHD2 Mar 07, 2017 MedGen:C3809278,OMIM:615369;MedGen:CN517202 Epileptic encephalopathy, childhood-onset;not provided germline 15 93020014 CATCAGATCATTCTTTCTTTTCCTGCAGATCGAGGAGACTGGCAGAGGGAAAGAAAGTTCA 77056664 427290 NM_000038.5(APC):c.3766C>T (p.Gln1256Ter) APC - MedGen:CN240755 Familial adenomatous polyposis germline 5 112839360 GCTGCCACTTGCAAAGTTTCTTCTATTAACCAAGAAACAATACAGACTTATTGTGTAGAAG 727504096 177240 NM_138694.3(PKHD1):c.370C>T (p.Arg124Ter) PKHD1 Mar 21, 2014 MedGen:C0085548,OMIM:263200,Orphanet:ORPHA731,SNOMED CT:28770003 Autosomal recessive polycystic kidney disease germline 6 52079920 CAGCTGGTAAGCAGTCCAAATCCAGGACCACGAGATAGCTGTACTTTCAAGGTGGGTTCTA 121909021 22211 NM_000492.3(CFTR):c.1046C>T (p.Ala349Val) CFTR Dec 08, 2016 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008;MedGen:CN169374 Cystic fibrosis;not specified germline 7 117540276 CCATCTCATTCTGCATTGTTCTGCGCATGGCGGTCACTCGGCAATTTCCCTGGGCTGTACA 745983207 247452 NM_006556.3(PMVK):c.412C>T (p.Arg138Ter) PMVK Jul 23, 2015 Human Phenotype Ontology:HP:0200044,MedGen:C0949506,OMIM:175800,Orphanet:ORPHA735,SNOMED CT:80432009 Porokeratosis of Mibelli germline 1 154926384 ACGGTCCGCGTTGTAGCGTTGGAGCAGAGCCGACAGCAGCGGGGCTGGGTGTTCACGCCAG 1131691652 422506 NM_000206.2(IL2RG):c.391C>T (p.Gln131Ter) IL2RG Sep 23, 2015 MedGen:CN517202 not provided germline X 71110567 GAGATCCACCTCTACCAAACATTTGTTGTTCAGCTCCAGGACCCACGGGAACCCAGGAGAC 587784170 168243 NM_022455.4(NSD1):c.5965C>T (p.Gln1989Ter) NSD1 Feb 08, 2013 MedGen:CN035106,OMIM:117550 Sotos syndrome 1 germline 5 177282537 GAAGAATGCAGAGCTCGAATTCGCTATGCTCAAGAACATGATATCACTAATTTCTATATGC 886041466 264697 NM_001079668.2(NKX2-1):c.637C>T (p.Gln213Ter) NKX2-1 Dec 31, 2015 MedGen:CN517202 not provided germline 14 36517847 GTGTACGAGCTGGAGCGACGCTTCAAGCAACAGAAGTACCTGTCGGCGCCGGAGCGCGAGC 1057517683 359136 NM_207421.4(PADI6):c.970C>T (p.Gln324Ter) PADI6 Dec 02, 2016 MedGen:C4310659,OMIM:617234 Preimplantation embryonic lethality 2 germline 1 17392121 AACTGGCTTCTCTCCCATGGCAGGGAGCTGCAGCTGCAGGGTTTTGTGGACACAGTGACGA 80357043 70032 NM_007294.3(BRCA1):c.5054C>T (p.Thr1685Ile) BRCA1 Oct 02, 2015 MedGen:C2676676,OMIM:604370 Breast-ovarian cancer, familial 1 germline 17 43067628 CTTTAACTAATCTAATTACTGAAGAGACTACTCATGTTGTTATGAAAACAGGTATACCAAG 863225152 214206 NM_023073.3(CPLANE1):c.8167C>T (p.Gln2723Ter) CPLANE1 Feb 23, 2015 MedGen:C3553264,OMIM:614615 Joubert syndrome 17 unknown 5 37153784 GCAATACAGAACATTGCTGAAAACATAGAACAGGATTTCCCCAAGCCTGAAATGCTAGATC 80357485 69485 NM_007294.3(BRCA1):c.3286C>T (p.Gln1096Ter) BRCA1 Mar 09, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 1;Hereditary cancer-predisposing syndrome;not provided germline 17 43092245 TTAGGGGTTTTGCAACCTGAGGTCTATAAACAAAGTCTTCCTGGAAGTAATTGTAAGCATC 104894855 26728 NM_004484.3(GPC3):c.595C>T (p.Arg199Ter) GPC3 Dec 05, 2016 MedGen:C0796154,OMIM:312870,Orphanet:ORPHA373,SNOMED CT:439143004;MedGen:CN517202 Simpson-Golabi-Behmel syndrome;not provided germline X 133753919 GATTCAGCCTTGGACATCAATGAGTGCCTCCGAGGAGCAAGACGTGACCTGAAAGTATTTG 1085307161 414088 NM_001204.6(BMPR2):c.88C>T (p.Q30*) BMPR2 - MedGen:C0152171,OMIM:178600,SNOMED CT:26174007 Primary pulmonary hypertension germline 2 202464820 TTTATTTCCTTTATTTTAGCTTCGCAGAATCAAGAACGGCTATGTGCGTTTAAAGATCCGT 151212477 89865 NM_004572.3(PKP2):c.1489C>T (p.Arg497Ter) PKP2 Jul 10, 2015 MedGen:C1836906,OMIM:609040 Arrhythmogenic right ventricular cardiomyopathy, type 9 germline 12 32843203 CAAGGCGGGCGGATCACGAGGTCAGGAGTTCGAGACCAGCCTGACCAACATGGTGAGACCC 80358557 46375 NM_000059.3(BRCA2):c.3109C>T (p.Gln1037Ter) BRCA2 Oct 16, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline;somatic 13 32337464 AGCAAAATGTTCTTCAAAGATATTGAAGAACAATATCCTACTAGTTTAGCTTGTGTTGAAA 767213728 432425 NM_001211.5(BUB1B):c.1648C>T (p.Arg550Ter) BUB1B Apr 30, 2014 MedGen:CN031748,OMIM:257300 Mosaic variegated aneuploidy syndrome 1 maternal 15 40202608 TCTTTTTCCAGTCCTCCTGCAGATCCCCCACGAGTTTTAGCTCAACGAAGACCCCTTGCAG 118203959 16174 NM_001142617.1(STRA6):c.1963C>T (p.Arg655Cys) STRA6 Mar 01, 2007 MedGen:C1832661,OMIM:601186,Orphanet:ORPHA2470 Microphthalmia syndromic 9 germline 15 74180121 CTGCTGCACAACCCAACCCTGCAGGTCTTCCGCAAGACGGCCCTGTTGGGTGCCAATGGTG 797045489 208269 NM_004380.2(CREBBP):c.3436C>T (p.Gln1146Ter) CREBBP Mar 20, 2015 MedGen:C0035934,OMIM:180849,Orphanet:ORPHA353277,SNOMED CT:45582004 Rubinstein-Taybi syndrome germline 16 3757982 TCCACCATCAAGCGGAAGCTGGACACAGGGCAATACCAAGAGCCCTGGCAGTACGTGGACG 45517337 58686 NM_000548.4(TSC2):c.4318C>T (p.Gln1440Ter) TSC2 Oct 19, 2017 MedGen:C1860707,OMIM:613254;MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000;MedGen:CN517202 Tuberous sclerosis 2;Tuberous sclerosis syndrome;not provided germline 16 2084540 TGGTCGGCCTCGGGCGAAGACAGTCGGGGCCAGCCCGAGGGTCCCTTGCCTTCCAGCTCCC 786204498 186771 NM_019098.4(CNGB3):c.112C>T (p.Gln38Ter) CNGB3 Mar 27, 2017 MedGen:C1849792,OMIM:262300 Achromatopsia 3 germline;unknown 8 86743516 GAAGAAGGCTCTCACCCAAGTAATCAGTCTCAGCAAACCACAGCACAGGTATGTCCTCTAC 869320802 227573 NM_001012614.1(CTBP1):c.991C>T (p.Arg331Trp) CTBP1 Jun 30, 2017 MedGen:CN517202 not provided germline 4 1213028 AGCTGTTCCTTCCTCCTGCATCTCCCAGGCCGGATCCCAGACAGCCTGAAGAACTGTGTCA 886043414 270764 NM_003482.3(KMT2D):c.5104C>T (p.Arg1702Ter) KMT2D Mar 02, 2016 MedGen:CN030661,OMIM:147920 Kabuki syndrome 1 germline 12 49044284 CTCCTCATAGGCATTGGTGGTTTCATGGTGCGACAGCGGAAATCCCACACACGCACGAAAA 267607225 15303 NM_178452.5(DNAAF1):c.811C>T (p.Arg271Ter) DNAAF1 Apr 04, 2017 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244;MedGen:C2750790,OMIM:613193 Ciliary dyskinesia;Ciliary dyskinesia, primary, 13 germline 16 84159744 ATTCCTAATTACAGAAGGACAGTCACTGTACGACTAAAGCACTTAACATACCTGGATGATA 104894070 16225 NM_000497.3(CYP11B1):c.281C>T (p.Pro94Leu) CYP11B1 Dec 01, 2016 Human Phenotype Ontology:HP:0008258,MedGen:C0001627,Orphanet:ORPHA418,SNOMED CT:237751000;MedGen:C0268292,OMIM:202010,Orphanet:ORPHA90795,SNOMED CT:124214007;MedGen:CN517202 Congenital adrenal hyperplasia;Deficiency of steroid 11-beta-monooxygenase;not provided germline 8 142879146 GAGGAGCAGGCATGGTGTGTGTGATGCTGCCGGAGGACGTGGAGAAGCTGCAACAGGTGGA 398123320 98726 NM_000314.6(PTEN):c.286C>T (p.Pro96Ser) PTEN Oct 19, 2017 MedGen:CN517202 not provided germline 10 87933045 GCACAATATCCTTTTGAAGACCATAACCCACCACAGCTAGAACTTATCAAACCCTTTTGTG 786203115 181687 NM_001128425.1(MUTYH):c.799C>T (p.Gln267Ter) MUTYH Aug 29, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1837991,OMIM:608456,Orphanet:ORPHA247798 Hereditary cancer-predisposing syndrome;MYH-associated polyposis germline 1 45332300 GCAGTGTTCCCTTCTTTTAGGGGTCTAGCCCAGCAGCTGGTGGACCCAGCCCGGCCAGGAG 751288871 198401 NM_004572.3(PKP2):c.1951C>T (p.Arg651Ter) PKP2 Jan 08, 2015 MedGen:CN517202 not provided germline 12 32822487 AACAACAAAAGTATTGGATGTTTTGGCAGTCGAAGCAGGAAAGTAAAAGAGGTATATTGGG 1131692045 423703 NM_003403.4(YY1):c.1030C>T (p.Gln344Ter) YY1 Jul 07, 2017 MedGen:CN303159,OMIM:617557 GABRIELE-DE VRIES SYNDROME germline 14 100276616 TTTGTTGAGAGTTCAAAACTAAAACGACACCAACTGGTTCATACTGGAGAGAAGCCCTTTC 730880377 178872 NM_173689.6(CRB2):c.1897C>T (p.Arg633Trp) CRB2 Jan 08, 2015 MedGen:C1857423,OMIM:219730,Orphanet:ORPHA443988 Ventriculomegaly with cystic kidney disease germline 9 123370950 CTGTGGACTCATTTCCGTTGCGACTGTGCCCGGCCCCATAGAGGTCCCACGTGCGCTGATG 794727176 191835 NM_022455.4(NSD1):c.5332C>T (p.Arg1778Ter) NSD1 Jul 25, 2017 MedGen:C0004903,OMIM:130650,Orphanet:ORPHA116,SNOMED CT:81780002;MedGen:CN035106,OMIM:117550 Beckwith-Wiedemann syndrome;Sotos syndrome 1 germline 5 177269630 AGGTGGTGGCCAGCTGAGATCTGCCATCCTCGAGCTGTTCCTTCCAACATTGATAAGATGA 189840848 40283 NM_182476.2(COQ6):c.484C>T (p.Arg162Ter) COQ6 Jun 07, 2016 MedGen:C3553349,OMIM:614650,Orphanet:ORPHA280406 Coenzyme Q10 deficiency, primary, 6 germline 14 73958149 TTTTTTTCCTCTCTTTTGACCTCCCCAGACCGAGTGACGGTTCTCTACAGGAGCAAAGCCA 878853009 237003 NM_025074.6(FRAS1):c.10948C>T (p.Gln3650Ter) FRAS1 Jan 30, 2015 MedGen:CN517202 not provided germline 4 78534471 GCATTTAGATTCCTGATACCCATTGCATTCCAGCAGACCAACCGCCCTGTGCCAGTTGTGT 797045090 205128 NM_002016.1(FLG):c.2143C>T (p.Gln715Ter) FLG Dec 30, 2014 MedGen:C0079584,OMIM:146700 Ichthyosis vulgaris germline 1 152312743 GGAGAAAGACATGGATCCCGCCACCAGCTCCAGTCAGCAGACAGCTCCAGACACTCAGGCA 763939668 231695 NM_000535.6(PMS2):c.7C>T (p.Arg3Ter) PMS2 Jan 23, 2017 MedGen:CN517202 not provided germline 7 6009013 CGAGGCGGATCGGGTGTTGCATCCATGGAGCGAGCTGAGAGCTCGAGGTGAGCGGGGCTCG 36209567 27115 NM_000131.4(F7):c.1061C>T (p.Ala354Val) F7 Jan 01, 2000 MedGen:C0015503,OMIM:227500,Orphanet:ORPHA327,SNOMED CT:37193007 Factor VII deficiency germline 13 113118668 GGGGCCAGCTGCTGGACCGTGGCGCCACGGCCCTGGAGCTCATGGTCCTCAACGTGCCCCG 146591309 431681 NM_000440.2(PDE6A):c.769C>T (p.Arg257Ter) PDE6A Jan 01, 2015 Human Phenotype Ontology:HP:0000547,MeSH:D012174,MedGen:C0035334,OMIM:268000,Orphanet:ORPHA791,SNOMED CT:28835009 Retinitis pigmentosa unknown 5 149931117 AAAGTCTTTGAAGAACTTACGGACATCGAACGACAGTTCCACAAAGCCCTGTACACAGTCC 121434514 16772 NM_015634.3(KIF1BP):c.268C>T (p.Arg90Ter) KIF1BP Jun 15, 2013 MedGen:C1321551,OMIM:182212,SNOMED CT:83092002 Shprintzen-Goldberg syndrome germline 10 68989100 GTGGTGGAGCCCGAGGGGCCCGTCGCCCAGCGAGCGGTGAGGCTGGCAGTCATCGAGTTCC 199473524 78188 NM_000238.3(KCNH2):c.1838C>T (p.Thr613Met) KCNH2 Mar 28, 2017 MedGen:CN230736;MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MeSH:D008133,MedGen:C0023976,SNOMED CT:9651007;MedGen:CN517202 Cardiovascular phenotype;Congenital long QT syndrome;Long QT syndrome;not provided germline 7 150951555 GCGGCCCCTCCATCAAGGACAAGTATGTGACGGCGCTCTACTTCACCTTCAGCAGCCTCAC 367543023 51241 NM_000057.3(BLM):c.2887C>T (p.His963Tyr) BLM Mar 28, 2013 MedGen:C0005859,OMIM:210900,Orphanet:ORPHA125,SNOMED CT:4434006 Bloom syndrome not provided 15 90790712 ATTGACAAACCGGACGTGCGATTTGTGATTCATGCATCTCTCCCTAAATCTGTGGAGGGTT -1 481643 NM_181457.3(PAX3):c.583C>T (p.Arg195Ter) PAX3 Jan 23, 2018 MedGen:CN517202 not provided germline 2 222294170 AAACACAGCATCGACGGCATCCTGAGCGAGCGAGGTAAGCGGTGGCGCCTTGGGCGGCGCA 606231454 171042 NM_001114748.1(TMEM240):c.239C>T (p.Thr80Met) TMEM240 Oct 01, 2014 MedGen:C1843891,OMIM:607454,Orphanet:ORPHA98773 Spinocerebellar ataxia 21 germline 1 1535723 TGGTGGACGCCTCCGAGAACTACTTTGTGACGGACAGTGTGACCAAGCAGGAGATCGACCT -1 432648 NM_000535.6(PMS2):c.709C>T (p.Gln237Ter) PMS2 May 22, 2017 MedGen:C0009405,Orphanet:ORPHA443090;MedGen:CN517202 Hereditary nonpolyposis colon cancer;not provided germline 7 5997420 CTGTGAATTTTTTTTTTTTTTTTTCAGTTGCAAAGCCTCATTCCTTTTGTTCAGCTGCCCC 1060500610 395471 NM_004415.3(DSP):c.4822C>T (p.Gln1608Ter) DSP May 11, 2017 MedGen:C1843896,OMIM:607450 Arrhythmogenic right ventricular cardiomyopathy, type 8 germline 6 7581012 CTGGAAGGCATGAGGAGGTCGCTGAAGGAGCAAGCCATCAAAATCACCAACCTGACCCAGC 786203443 184781 NM_001042492.2(NF1):c.8095C>T (p.Gln2699Ter) NF1 Nov 03, 2014 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 17 31358604 GTGTACCATGAAGAATCCCCACCACAATACCAAACATCTTACCTGCAAAGTAAATAAATGT 118192142 76872 NM_000540.2(RYR1):c.14440C>T (p.Leu4814Phe) RYR1 May 11, 2010 MedGen:C0751951,OMIM:117000,Orphanet:ORPHA597,SNOMED CT:43152001;MedGen:CN517202 Central core disease;not provided unknown 19 38580057 CACTACAACAACTTCTTCTTTGCTGCCCATCTCCTGGACATCGCCATGGGGGTCAAGACGC 774906736 399614 NM_014363.5(SACS):c.11707C>T (p.Arg3903Ter) SACS Jul 11, 2016 MedGen:C0037772 Spastic paraplegia germline 13 23332169 GTCAAGGTGAGGAGTGATCTCGAGAATGTACGAGACCTTGCGCTTTACCTCCCAAGCCAGG 111033623 25937 NM_002351.4(SH2D1A):c.163C>T (p.Arg55Ter) SH2D1A May 19, 2017 MedGen:C1868674,OMIM:308240;MedGen:C0549463,Orphanet:ORPHA2442 Lymphoproliferative syndrome 1, X-linked;X-Linked Lymphoproliferative Syndrome germline X 124365786 CACAGGTATCACGGTTACATTTATACATACCGAGTGTCCCAGACAGAAACAGGTTCTTGGA 879255583 205712 NM_001830.3(CLCN4):c.1664C>T (p.Ala555Val) CLCN4 Nov 15, 2016 MedGen:CN232948;MedGen:CN517202 CLCN4-related disorder;not provided de novo;germline X 10213768 GTCTGGAGTACATCGTGCCCCTGATGGCGGCGGCTGTGACCAGCAAGTGGGTAGCTGATGC 63750970 96529 NM_000251.2(MSH2):c.289C>T (p.Gln97Ter) MSH2 Sep 09, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:C2936783,OMIM:120435;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Lynch syndrome;Lynch syndrome I;not provided germline;unknown 2 47408478 TCTTTTGTAAAAGATCTTCTTCTGGTTCGTCAGTATAGAGTTGAAGTTTATAAGAATAGAG 398122741 97247 NM_000059.3(BRCA2):c.217C>T (p.Gln73Ter) BRCA2 Sep 08, 2016 MedGen:C2675520,OMIM:612555 Breast-ovarian cancer, familial 2 germline 13 32319226 AAAACTCCACAAAGGAAACCATCTTATAATCAGCTGGCTTCAACTCCAATAATATTCAAAG 727504304 176240 NM_024022.2(TMPRSS3):c.1192C>T (p.Gln398Ter) TMPRSS3 Aug 15, 2013 MedGen:CN043648,Orphanet:ORPHA87884 Nonsyndromic hearing loss and deafness germline 21 42376543 GGCTACCTGACGGGTGGCGTGGACAGCTGCCAGGTACGGGGCCGCAGCGGTGGGCGAGGCC 387906855 39270 NM_005902.3(SMAD3):c.788C>T (p.Pro263Leu) SMAD3 Jan 01, 2012 MedGen:C3151087,OMIM:613795,Orphanet:ORPHA284984 Loeys-Dietz syndrome 3 germline 15 67181370 CATCCATGACTGTGGATGGCTTCACCGACCCCTCCAATTCGGAGCGCTTCTGCCTAGGGCT 267606790 27125 NM_000131.4(F7):c.628C>T (p.Gln210Ter) F7 Aug 01, 2001 MedGen:C0015503,OMIM:227500,Orphanet:ORPHA327,SNOMED CT:37193007 Factor VII deficiency germline 13 113116822 ATTCTAGAAAAAAGAAATGCCAGCAAACCCCAAGGCCGAATTGTGGGGGGCAAGGTGTGCC 72645347 32382 NM_000088.3(COL1A1):c.934C>T (p.Arg312Cys) COL1A1 Dec 03, 2014 Human Phenotype Ontology:HP:0000978,MedGen:C0423798;MedGen:C0268335,OMIM:130000,Orphanet:ORPHA287,SNOMED CT:20766005,SNOMED CT:83470009;Human Phenotype Ontology:HP:0001030,MedGen:C0241181;Human Phenotype Ontology:HP:0001382,MedGen:C1844820 Bruising susceptibility;Ehlers-Danlos syndrome, classic type;Fragile skin;Joint hypermobility germline;unknown 17 50196337 GGCCCCCGTGGCCTGCCTGGTGAGAGAGGTCGCCCTGGAGCCCCTGGCCCTGCTGTAAGTA 121907986 18926 NM_000521.3(HEXB):c.850C>T (p.Arg284Ter) HEXB Oct 13, 2017 MedGen:C0036161,OMIM:268800,Orphanet:ORPHA796,SNOMED CT:23849003;MedGen:C0751490;MedGen:CN517202 Sandhoff disease;Sandhoff disease, infantile;not provided germline 5 74713584 GTGATTGAATATGCCAGATTACGAGGAATTCGAGTCCTGCCAGAATTTGATACCCCTGGGC 132630322 26064 NM_198270.3(NHS):c.1117C>T (p.Arg373Ter) NHS Jul 26, 2013 MedGen:C0796085,OMIM:302350,SNOMED CT:445257004;MedGen:CN517202 Nance-Horan syndrome;not provided germline X 17724370 GTTCATTCACAATCGGTACTACAGCGGAGACGAAAATTGAGGAGGAGGAAAACCATCTCGG 118204114 16512 NM_000190.3(HMBS):c.755C>T (p.Ala252Val) HMBS Dec 01, 1993 MedGen:C0162565,OMIM:176000,Orphanet:ORPHA79276,SNOMED CT:234422006 Acute intermittent porphyria germline 11 119092507 AGACTCTGCTTCGCTGCATCGCTGAAAGGGCCTTCCTGAGGCACCTGGTAGGGCCTGTGCT 281875238 38963 NM_003070.4(SMARCA2):c.3637C>T (p.Arg1213Trp) SMARCA2 Feb 26, 2012 MedGen:C1303073,OMIM:601358,Orphanet:ORPHA3051,SNOMED CT:401046009;MedGen:CN517202 Nicolaides-Baraitser syndrome;not provided germline 9 2116002 ATGTTTGACCAAAAGTCTTCAAGCCACGAGCGGAGGGCATTCCTGCAGGCCATCTTGGAGC 886042562 267371 NM_018849.2(ABCB4):c.2833C>T (p.Gln945Ter) ABCB4 Sep 09, 2015 MedGen:C1865643,OMIM:602347,Orphanet:ORPHA79305 Progressive familial intrahepatic cholestasis 3 germline 7 87411984 CACATCTATGGAATTACTTTTAGTATCTCACAAGCATTTATGTATTTTTCCTATGCCGGTT 757958943 432247 NM_004628.4(XPC):c.1243C>T (p.Arg415Ter) XPC Jun 19, 2017 MedGen:C2752147,OMIM:278720,SNOMED CT:25784009 Xeroderma pigmentosum, group C inherited 3 14158640 CCAGGAGACAAGCAGGAGAAGGCAACCCAGCGACGTCCGCATGGCCGGGAGCGGCGGGTGG 122445102 26771 NM_000489.4(ATRX):c.5131C>T (p.Pro1711Ser) ATRX Jan 01, 1996 MedGen:C4016452 Mental retardation-hypotonic facies syndrome, X-linked germline X 77633210 AAAGAAATATTTAACAAAGCTTTGGTTGATCCAGGTAAGGTATTAATAGACAGTGACATAA 587784199 168273 NM_022455.4(NSD1):c.6454C>T (p.Arg2152Ter) NSD1 Aug 12, 2015 MedGen:CN035106,OMIM:117550;MedGen:CN517202 Sotos syndrome 1;not provided germline 5 177292149 TACCACGCAGACTGTCTCAATCTGACCAAGCGACCAGCAGGTTGGTGCCAAAATCCATTTG -1 481799 NM_000127.2(EXT1):c.2101C>T (p.Arg701Ter) EXT1 Dec 13, 2017 MedGen:CN517202 not provided germline 8 117799852 CGTTGGGCTGACCCTGACCACTTTGCCCAGCGACAGAGCTGCATGAATACGTTTGCCAGCT -1 425544 NM_015560.2(OPA1):c.2197C>T (p.Arg733Ter) OPA1 May 09, 2017 MedGen:CN517202 not provided germline 3 193658917 AGGGTTATTCAACACAATGCTTTGGAAGACCGATCCATATCTGATAAACAGCAATGGGATG 398122974 97318 NM_133436.3(ASNS):c.1648C>T (p.Arg550Cys) ASNS Oct 18, 2016 Human Phenotype Ontology:HP:0002269,MedGen:C1837249;MedGen:C3809971,OMIM:615574,Orphanet:ORPHA391376 Abnormality of neuronal migration;Asparagine synthetase deficiency germline;maternal;unknown 7 97852297 AAGTGGATCAATGCCACTGACCCTTCTGCCCGCACGCTGACCCACTACAAGTCAGCTGTCA 398124058 100681 NM_004006.2(DMD):c.7894C>T (p.Gln2632Ter) DMD Oct 24, 2012 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009;MedGen:C3668940,OMIM:302045;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Becker muscular dystrophy;Dilated cardiomyopathy 3B;Duchenne muscular dystrophy germline X 31658123 AATCTATAGCAGTTGGCCAAAGACCTCCGCCAGTGGCAGACAAATGTAGATGTGGCAAATG 869025281 223019 NM_020771.3(HACE1):c.2242C>T (p.Arg748Ter) HACE1 Nov 30, 2017 MedGen:C4225215,OMIM:616756,Orphanet:ORPHA464282;MedGen:CN517202 Spastic paraplegia and psychomotor retardation with or without seizures;not provided germline 6 104750442 GCGGAGTACGTCCAGCTTGTTACTGAACTTCGAATGACAAGAGCCATTCAGCCTCAGATCA 1131692308 424521 NM_000280.4(PAX6):c.511C>T (p.Gln171Ter) PAX6 - MedGen:C0344542,OMIM:106210 Aniridia 1 de novo 11 31800703 GGTTGGTATCCGGGGACTTCGGTGCCAGGGCAACCTACGCAAGGTAAAACCCAAGCAGCCA 200275281 377641 NM_016941.3(DLL3):c.661C>T (p.Arg221Ter) DLL3 Dec 16, 2016 MedGen:CN517202 not provided germline 19 39504079 TCTGCCTCTCTGTCCCCCATAGTGGTGTGCCGAGCAGGCTGCAGCCCTGAGCATGGCTTCT 730880025 178365 NM_006000.2(TUBA4A):c.958C>T (p.Arg320Cys) TUBA4A Oct 22, 2014 MedGen:C4015512,OMIM:616208 Amyotrophic lateral sclerosis 22 with or without frontotemporal dementia germline 2 219250741 GGCAAGTACATGGCCTGCTGCCTGCTGTACCGTGGAGATGTGGTGCCCAAGGATGTCAACG 72554326 103025 NM_000531.5(OTC):c.205C>T (p.Gln69Ter) OTC - MedGen:CN517202 not provided unknown X 38367418 CTATCAGCAGATCTGAAATTTAGGATAAAACAGAAAGGAGAGGTATGTAACATTTTCTTTT 587777423 137085 NM_032237.4(POMK):c.325C>T (p.Gln109Ter) POMK Nov 20, 2014 MedGen:C3808964,OMIM:615249;MedGen:C4015184,OMIM:616094,Orphanet:ORPHA445110 Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type a, 12;Muscular dystrophy-dystroglycanopathy (limb-girdle), type c, 12 germline 8 43122149 GAGTGGAAGGAGCACAAAGTTGCACTCTCACAGCTCACCAGCCTGGAGATGAAAGATGATT 863223980 210706 NM_000143.3(FH):c.139C>T (p.Gln47Ter) FH Sep 28, 2017 MedGen:C0027672,SNOMED CT:699346009;Human Phenotype Ontology:HP:0007437,MedGen:C1708350,OMIM:150800,Orphanet:ORPHA523;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Multiple cutaneous leiomyomas;not provided germline 1 241517310 ATAGTGTTGTATTCTTGTCTTTAGGCAAGCCAAAATTCCTTCCGGATAGAATATGATACCT 276174913 46746 NM_000059.3(BRCA2):c.8869C>T (p.Gln2957Ter) BRCA2 Sep 08, 2016 MedGen:C2675520,OMIM:612555 Breast-ovarian cancer, familial 2 germline 13 32379431 GAAATTAGGAAGGCCATGGAATCTGCTGAACAAAAGGAACAAGGTTTATCAAGGGATGTCA 121434418 21595 NM_001203.2(BMPR1B):c.1456C>T (p.Arg486Trp) BMPR1B Oct 14, 2003 Human Phenotype Ontology:HP:0009372,MedGen:C1832702,OMIM:112600,Orphanet:ORPHA93396 Type A2 brachydactyly germline 4 95154620 CACAATCCTGCATCAAGGCTGACAGCCCTGCGGGTTAAGAAAACACTTGCCAAAATGTCAG 121908341 19752 NM_015166.3(MLC1):c.839C>T (p.Ser280Leu) MLC1 Apr 01, 2001 MedGen:C1858854,OMIM:604004,Orphanet:ORPHA2478 Megalencephalic leukoencephalopathy with subcortical cysts 1 germline 22 50068488 CGCTGCTGTTCACAGCCTCTGGATATCTGTCATTCAGCATCATGAGAATCGTGGAGATGTT 104894191 20052 NM_021926.3(ALX4):c.418C>T (p.Gln140Ter) ALX4 Jan 01, 2001 MedGen:C1865044,OMIM:609597 Parietal foramina 2 germline 11 44309645 AAGACGCCCCCGGACGGCAGCCTCAAACTCCAGGAAGGCAGCAGCGGCCACAGCGCGGCCT 886039756 260380 NM_024818.4(UBA5):c.181C>T (p.Arg61Ter) UBA5 Oct 06, 2016 MedGen:C4310700,OMIM:617132 Epileptic encephalopathy, early infantile, 44 germline 3 132665842 TTTGTTTTAAGCCGCTTGATGGCATTGAAACGAATGGGAATTGTAAGCGACTATGAGGTAT 186710233 47482 NM_000532.4(PCCB):c.1534C>T (p.Arg512Cys) PCCB May 17, 2012 Human Phenotype Ontology:HP:0003353,MedGen:C0268579,OMIM:606054,Orphanet:ORPHA35 Propionic acidemia not provided 3 136329940 GTGGATGACATCATCCAACCTTCTTCCACACGTGCCCGAATCTGCTGTGACCTGGATGTCT 886044647 275324 NM_173591.3(OTOGL):c.3076C>T (p.Gln1026Ter) OTOGL Sep 05, 2016 MedGen:C3554159,OMIM:614944 Deafness, autosomal recessive 84b germline 12 80302673 GGTTTTTTTCTGGAAAACAAATCTACCTACCAGCTTTGGAAGGCTGGTTACTATATAGTAG 1057519279 361776 NM_014727.2(KMT2B):c.1633C>T (p.Arg545Ter) KMT2B Dec 09, 2017 MedGen:C4310633,OMIM:617284 Dystonia 28, childhood-onset de novo;germline 19 35720980 CGCTCCTCCCGTGTCATCAAGACACCCCGGCGATTTATGGATGAAGACCCCCCCAAACCCC 121912769 32684 NM_000494.3(COL17A1):c.3676C>T (p.Arg1226Ter) COL17A1 Apr 25, 2017 MedGen:C0268374,OMIM:226650,Orphanet:ORPHA89840,SNOMED CT:33662006;MedGen:C2608084 Adult junctional epidermolysis bullosa;Epidermolysis bullosa, junctional, localisata variant not provided 10 104034711 CCTCCAGGACCTCCTGGTCCCCCAGGGCCTCGAGGGCCCCCGGGTGTCTCAGGAGCCCTGG 370596113 101600 NM_015506.2(MMACHC):c.481C>T (p.Arg161Ter) MMACHC Nov 02, 2016 MedGen:C1848561,OMIM:277400,Orphanet:ORPHA26;MedGen:CN517202 Methylmalonic acidemia with homocystinuria;not provided germline;unknown 1 45508847 CACCCCCGATTTGGGGGCTGGTTTGCCATCCGAGGGGTAGTGCTGCTGCCAGGGATAGAGG 797044934 205229 NM_020919.3(ALS2):c.4897C>T (p.Gln1633Ter) ALS2 May 28, 2013 MeSH:D030342,MedGen:C0950123 Inborn genetic diseases germline 2 201704160 CTCATTGAGGATCTAATGGACCCCTATCTTCAGCATGGGGAACAGGGTATAATGTTCACCA 780247476 208017 NM_014363.5(SACS):c.10906C>T (p.Arg3636Ter) SACS Feb 19, 2016 MedGen:C1849140,OMIM:270550,Orphanet:ORPHA98 Spastic ataxia Charlevoix-Saguenay type germline;unknown 13 23332970 GATATCCTTCTGCATCATATATTCCAAGAACGAATGGATTTGTTATCTGGAAATTTTCTGA 1060500242 402465 NM_000267.3(NF1):c.4495C>T (p.Gln1499Ter) NF1 Aug 03, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003 Hereditary cancer-predisposing syndrome;Neurofibromatosis, type 1 germline 17 31260496 CTACTCTGGAACAATCAGGAGAAAATTGGGCAGTATCTTTCCAGCAACAGGTAAGATTTCC 387906864 39324 NM_003560.3(PLA2G6):c.1354C>T (p.Gln452Ter) PLA2G6 Oct 12, 2010 MedGen:C2751842,OMIM:612953,Orphanet:ORPHA199351 Parkinson disease 14 germline 22 38126444 GCATGCCCTGCTCTGTGCCTCACAGAACTACAGGATCTCATGCACATCTCACGGGCCCGGA 758222990 362874 NM_004448.3(ERBB2):c.2686C>T (p.Arg896Cys) ERBB2 Oct 02, 2014 Human Phenotype Ontology:HP:0100013,MeSH:D001943,MedGen:C1458155,Orphanet:ORPHA180250,SNOMED CT:126926005 Neoplasm of the breast somatic 17 39725363 ATCAAGTGGATGGCGCTGGAGTCCATTCTCCGCCGGCGGTTCACCCACCAGAGTGATGTGT 114073621 426717 NM_005609.3(PYGM):c.1948C>T (p.Arg650Ter) PYGM Jan 12, 2016 MedGen:C0017924,OMIM:232600,Orphanet:ORPHA368,SNOMED CT:55912009 Glycogen storage disease, type V unknown 11 64751346 CGCCTCCGTGTCATCTTCCTGGAGAACTACCGAGTCTCACTGGCCGAGAAAGGTGGGTGCT 886229659 263818 NM_053025.3(MYLK):c.4459C>T (p.Arg1487Ter) MYLK Nov 03, 2016 MedGen:C3151077,OMIM:613780 Aortic aneurysm, familial thoracic 7 germline 3 123647384 CAGGTCTTTCGACTTGTAGAAAAGAAAACTCGAAAAGTCTGGGCAGGGAAGTTCTTCAAGG 587782705 152480 NM_000546.5(TP53):c.455C>T (p.Pro152Leu) TP53 Jul 31, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0085390,Orphanet:ORPHA524,SNOMED CT:428850001;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Li-Fraumeni syndrome;not provided germline;unknown 17 7675157 CTGTGCAGCTGTGGGTTGATTCCACACCCCCGCCCGGCACCCGCGTCCGCGCCATGGCCAT 80358532 46360 NM_000059.3(BRCA2):c.2818C>T (p.Gln940Ter) BRCA2 Aug 04, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline 13 32337173 TATGGAGACACAGGTGATAAACAAGCAACCCAAGTGTCAATTAAAAAAGATTTGGTTTATG 119103268 17320 NM_014874.3(MFN2):c.310C>T (p.Arg104Trp) MFN2 May 18, 2017 MedGen:C0007959,Orphanet:ORPHA166,SNOMED CT:50548001;MedGen:C4310725,OMIM:617087;MedGen:CN043576;MedGen:C1836485,OMIM:609260,Orphanet:ORPHA99947;MedGen:C1836485,OMIM:609260,Orphanet:ORPHA99947;MedGen:C0393807,OMIM:601152,Orphanet:ORPHA90120,SNOMED CT:128203003;MedGen:C0393807,OMIM:601152,Orphanet:ORPHA90120,SNOMED CT:128203003;MedGen:CN517202 Charcot-Marie-Tooth disease;Charcot-Marie-Tooth disease, axonal, autosomal recessive, type 2A2B;Charcot-Marie-Tooth disease, type 2;Charcot-Marie-Tooth disease, type 2A2A;Charcot-Marie-Tooth disease, type 2A2A;Hereditary motor and sensory neuropathy with optic atrophy;Hereditary motor and sensory neuropathy with optic atrophy;not provided de novo;germline;unknown 1 11992689 CGGAGGCACATGAAAGTGGCTTTTTTTGGCCGGTAAGTCCTTGAGGCACCCACCCTTTCTT 963717773 440152 NM_001080463.1(DYNC2H1):c.5984C>T (p.Ala1995Val) DYNC2H1 Jun 01, 2017 MedGen:C0265275,Orphanet:ORPHA474,SNOMED CT:75049004 Jeune thoracic dystrophy maternal;unknown 11 103177665 AATCAACGCTTTGGAGAATGTTAAGGGCTGCGCTTTGTAAAACTGGCAAAGTAGTGAAACA 61749423 105003 NM_000350.2(ABCA4):c.2041C>T (p.Arg681Ter) ABCA4 Jan 01, 2016 Human Phenotype Ontology:HP:0011504,MedGen:C0730330;MeSH:D057130,MedGen:C0339527,Orphanet:ORPHA65,SNOMED CT:193413001;MeSH:C535804,MedGen:C1855465,OMIM:248200;MedGen:CN517202 Bull's eye maculopathy;Leber congenital amaurosis;Stargardt disease 1;not provided germline;unknown 1 94060656 GTGAAGAGCATCGTCTTGGAGAAGGAGTTGCGACTGAAGGAGACCTTGAAAAATCAGGGTG 387906660 38760 NM_004333.4(BRAF):c.722C>T (p.Thr241Met) BRAF Sep 19, 2017 MedGen:CN029449,OMIM:115150,SNOMED CT:403770008;MedGen:C3150971,OMIM:613707;MedGen:C0684249,OMIM:211980,SNOMED CT:187875007;MeSH:D009634,MedGen:C0028326,Orphanet:ORPHA648,SNOMED CT:205824006;MedGen:C0041409,OMIM:163950;MedGen:C0041409,OMIM:163950;MedGen:C3150970,OMIM:613706;MedGen:C3150970,OMIM:613706;MedGen:CN166718,Orphanet:ORPHA98733;MedGen:CN517202 Cardiofaciocutaneous syndrome 1;LEOPARD syndrome 3;Lung cancer;Noonan syndrome;Noonan syndrome 1;Noonan syndrome 1;Noonan syndrome 7;Noonan syndrome 7;Rasopathy;not provided germline;unknown 7 140801550 TGTGATTTTTTACTTTGCAGGTACGAAAAACGTTTTTCACCTTAGCATTTTGTGACTTTTG 61750595 15336 NM_000552.4(VWF):c.4975C>T (p.Arg1659Ter) VWF Dec 01, 1992 MedGen:CN517202;MedGen:C1264039,OMIM:193400,Orphanet:ORPHA166078,SNOMED CT:128106003;MedGen:C1264041,Orphanet:ORPHA166096,SNOMED CT:128108002 not provided;von Willebrand disease type 1;von Willebrand disease type 3 germline 12 6018443 ATCCTCATCCAGGACTTTGAGACGCTCCCCCGAGAGGCTCCTGACCTGGTGCTGCAGAGGT 781409616 465844 NM_004360.4(CDH1):c.283C>T (p.Gln95Ter) CDH1 Jul 31, 2017 MedGen:C1708349,OMIM:137215,Orphanet:ORPHA26106 Hereditary diffuse gastric cancer germline 16 68801789 GTCAAAAGGCCTCTACGGTTTCATAACCCACAGATCCATTTCTTGGTCTACGCCTGGGACT 1057517143 358042 NM_024649.4(BBS1):c.871C>T (p.Gln291Ter) BBS1 Aug 12, 2016 MedGen:C0752166,OMIM:209900,Orphanet:ORPHA110,SNOMED CT:5619004 Bardet-Biedl syndrome unknown 11 66523496 CACCCCAAGTACTGCATCGAGCTGAGCGCCCAGCCTGTGGGACTTATCCGGGTACACAAGG 397518036 57757 NM_206933.2(USH2A):c.820C>T (p.Arg274Ter) USH2A Jul 26, 2012 MedGen:C1848634,OMIM:276901 Usher syndrome, type 2A germline 1 216327619 GAGCAGTTTGTCGGAAGAATGCAAGATTTTCGATTATACCAAGTGGCACTTACAAACAGGT -1 482267 NM_000216.3(ANOS1):c.1267C>T (p.Arg423Ter) ANOS1 Apr 03, 2017 MedGen:CN517202 not provided germline X 8554039 GGAATTCAAACACAACTCCCTTTTCAAAGACGACGACCCACTCGCCCGCTGGAAGTCGGAG 63750203 96286 NM_000251.2(MSH2):c.1885C>T (p.Gln629Ter) MSH2 Sep 05, 2013 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Lynch syndrome germline 2 47475150 TATGTACGACCAGCCATTTTGGAGAAAGGACAAGGAAGAATTATATTAAAAGCATCCAGGC 886040991 262655 NM_017780.3(CHD7):c.4393C>T (p.Arg1465Ter) CHD7 Feb 02, 2017 MedGen:C0265354,OMIM:214800,Orphanet:ORPHA138,SNOMED CT:47535005;MedGen:CN517202 CHARGE association;not provided germline 8 60838115 CTTTCCAAGAAAGAAATAGAGGATCTTCTACGAAAAGGGGCCTATGGTGCACTCATGGATG 137852775 23776 NM_000182.4(HADHA):c.871C>T (p.Arg291Ter) HADHA Jun 26, 2017 MedGen:CN074230,OMIM:609016;MedGen:C0342786,OMIM:609015,SNOMED CT:237999008 Long-chain 3-hydroxyacyl-CoA dehydrogenase deficiency;Mitochondrial trifunctional protein deficiency germline 2 26214490 CAGGTTTACAAAAAAGTGGAAGAAAAAGTGCGAAAGCAGACTAAAGGCCTTTATCCTGCAC 63750610 95427 NM_000249.3(MLH1):c.1943C>T (p.Pro648Leu) MLH1 Feb 22, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:C1333991,OMIM:609310;MedGen:C1321489,OMIM:158320,Orphanet:ORPHA587,SNOMED CT:403824007;MedGen:C0265325,OMIM:276300,Orphanet:ORPHA252202,SNOMED CT:61665008 Hereditary cancer-predisposing syndrome;Lynch syndrome;Lynch syndrome II;Muir-Torré syndrome;Turcot syndrome germline 3 37048563 GATTACCCCTTCTGATTGACAACTATGTGCCCCCTTTGGAGGGACTGCCTATCTTCATTCT 200737038 221765 NM_004820.4(CYP7B1):c.334C>T (p.Arg112Ter) CYP7B1 Oct 05, 2016 MeSH:D030342,MedGen:C0950123;MedGen:C0037772 Inborn genetic diseases;Spastic paraplegia germline 8 64616207 GTGATAAAAAATCATAAACAATTAAGCTTTCGAGTATTTTCTAATAAATTATTAGAGAAAG 121434518 19109 NM_015474.3(SAMHD1):c.445C>T (p.Gln149Ter) SAMHD1 Mar 13, 2014 MedGen:C2749659,OMIM:612952 Aicardi Goutieres syndrome 5 germline 20 36935093 CCTCAATTTCAACGTCTTCGATACATCAAACAGCTGGGAGGTGGTTACTATGTTTTTCCAG -1 430886 NM_000044.4(AR):c.1846C>T (p.Arg616Cys) AR Apr 22, 2016 MedGen:C0039585,OMIM:300068,SNOMED CT:12313004 Androgen resistance syndrome germline X 67686087 AAATTCCGAAGGAAAAATTGTCCATCTTGTCGTCTTCGGAAATGTTATGAAGCAGGGATGA 764500338 247765 NM_013417.3(IARS):c.1252C>T (p.Arg418Ter) IARS Aug 31, 2016 MedGen:C4310720,OMIM:617093 Growth retardation, intellectual developmental disorder, hypotonia, and hepatopathy germline 9 92269937 ATTTACAAAGCAGTGCCCAGCTGGTTTGTGCGAGTGGAGAACATGGTGGACCAGCTCCTAA 773774134 195413 NM_022132.4(MCCC2):c.568C>T (p.His190Tyr) MCCC2 Jan 06, 2016 MedGen:C1859499,OMIM:210210;MedGen:CN517202 3-methylcrotonyl CoA carboxylase 2 deficiency;not provided germline 5 71604412 CGACAAGCAGATGTGTTTCCAGATCGAGACCACTTTGGCCGTACATTCTATAATCAGGCAA 587777350 132654 NM_025132.3(WDR19):c.682C>T (p.Gln228Ter) WDR19 Aug 01, 2013 MedGen:C3280612,OMIM:614377 Nephronophthisis 13 germline 4 39205232 GAACCAGATAACCCAGCTGATCTTGAATTTCAGCAGGACTTTGGCAACATTGTCTGCTATA 369573693 97325 NM_024876.3(COQ8B):c.958C>T (p.Arg320Trp) COQ8B Jun 07, 2016 MedGen:C3809965,OMIM:615573 Nephrotic syndrome, type 9 germline 19 40700387 CCAGCCGTGGTTAAGGAGCTGTGCACGACACGGGTGCTGGGCATGGAGCTGGCTGGAGGGG 199682210 165910 NM_001291303.1(FAT4):c.12851C>T (p.Ser4284Phe) FAT4 Sep 01, 2014 MedGen:C4014939,OMIM:616006 Hennekam lymphangiectasia-lymphedema syndrome 2 germline 4 125487373 AGATTAAGAATGGCAAAGTATATTTTACATCCGATGCAGGAATTGCTGGGAAAGTGGAGAG 1057520306 380148 NM_177987.2(TUBB8):c.713C>T (p.Thr238Met) TUBB8 Mar 02, 2017 MedGen:C4225210,OMIM:616780 Oocyte maturation defect 2 germline 10 47679 TGGTGTCTGCTACCATGAGTGGGGTCACCACGTGCCTGCGCTTCCCGGGCCAGCTGAATGC 766590491 228320 NM_206933.2(USH2A):c.8740C>T (p.Arg2914Ter) USH2A Apr 24, 2015 MedGen:C1848634,OMIM:276901 Usher syndrome, type 2A germline 1 215867112 GTACACAACAGTGTGGGTTTTACACCGAGCCGAGAAGTGACTGTGACAACGTTAGCTGGTC 879255678 247653 NM_144997.6(FLCN):c.1429C>T (p.Arg477Ter) FLCN Apr 04, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0346010,OMIM:135150,Orphanet:ORPHA122,SNOMED CT:110985001;MedGen:CN517202;MedGen:CN169374 Hereditary cancer-predisposing syndrome;Multiple fibrofolliculomas;not provided;not specified germline 17 17215188 GTGACCAGTGGGAGCCCTGTAGCTGCAGACCGAGGTGGGTGCCCCCAGGCAGAGTGTCCTT 750531880 368399 NM_000404.3(GLB1):c.902C>T (p.Ala301Val) GLB1 Feb 02, 2017 MedGen:CN517202 not provided germline 3 33051895 CCTCCCTCTATGATATACTTGCCCGTGGGGCGAGTGTGAACTTGTGAGTGTTCATTGCCTG 387906570 32963 NM_000039.2(APOA1):c.67C>T (p.Gln23Ter) APOA1 Jan 01, 1994 MedGen:C0039292,OMIM:205400,Orphanet:ORPHA31150 Tangier disease germline 11 116837134 CCCTCAGGGAGCCAGGCTCGGCATTTCTGGCAGCAAGATGAACCCCCCCAGAGCCCCTGGG -1 424359 NM_003482.3(KMT2D):c.12304C>T (p.Gln4102Ter) KMT2D - MedGen:CN030661,OMIM:147920 Kabuki syndrome 1 de novo 12 49032401 CAGCCACCTCTGAGGCTTCCAGGACAACAGCAGCAGCAAGTTAGCCTGCTCCACACAGCAG 121908643 21370 NM_000050.4(ASS1):c.53C>T (p.Ser18Leu) ASS1 Feb 01, 1991 MedGen:C0175683,OMIM:215700,Orphanet:ORPHA187 Citrullinemia type I germline 9 130452281 TTCTGGCCTACAGTGGCGGCCTGGACACCTCGTGCATCCTCGTGTGGCTGAAGGAACAAGG 864309718 215754 NM_001143826.2(MAPRE2):c.325C>T (p.Gln109Ter) MAPRE2 Dec 03, 2015 MedGen:C4225225,OMIM:616734 Skin creases, congenital symmetric circumferential, 2 germline 18 35102003 GGACGTTTCCAGGACAACCTGGATTTTATTCAATGGTTTAAGAAATTCTATGATGCTAACT 28936701 22772 NM_000104.3(CYP1B1):c.1405C>T (p.Arg469Trp) CYP1B1 Oct 02, 2017 Human Phenotype Ontology:HP:0000557,MedGen:C0020302,OMIM:231300,Orphanet:ORPHA98976;MedGen:CN517202 Buphthalmos;not provided germline 2 38070949 AGAGTGATGATTTTTTCAGTGGGCAAAAGGCGGTGCATTGGCGAAGAACTTTCTAAGATGC -1 428185 NM_032806.5(POMGNT2):c.745C>T (p.Gln249Ter) POMGNT2 Sep 27, 2015 MedGen:C3553813,OMIM:614830 Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type a, 8 germline 3 43080687 ATCACTACCTGGTACCAGTATGGCTTTGTGCAGCCCCAGGGCCCGAAGGCCAACATCCTCG 587779067 95989 NM_000251.2(MSH2):c.1046C>T (p.Pro349Leu) MSH2 Jul 12, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Lynch syndrome;not provided germline 2 47416399 AAAGACTTGTTAACCAGTGGATTAAGCAGCCTCTCATGGATAAGAACAGAATAGAGGAGAG 387906981 39661 NM_025132.3(WDR19):c.3307C>T (p.Arg1103Ter) WDR19 Sep 12, 2013 MedGen:C3280616,OMIM:614378 Cranioectodermal dysplasia 4 germline 4 39268040 TTCCGCTTGTACATGGCTCTGAAGCAATACCGAGAAGCTGCCCAGACTGCCATCATCATTG 786202743 183176 NM_000051.3(ATM):c.2098C>T (p.Gln700Ter) ATM Mar 13, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Ataxia-telangiectasia syndrome;Hereditary cancer-predisposing syndrome;not provided germline 11 108254013 CTGGATCGCTGTCTTCTGGGATTATCAGAACAGCTTCTGAATAATTACTCATCTGAGGTGA 397514720 75084 NM_080605.3(B3GALT6):c.200C>T (p.Pro67Leu) B3GALT6 Jun 06, 2013 MedGen:C0432243,OMIM:271640,Orphanet:ORPHA93359,SNOMED CT:254100000 Spondyloepimetaphyseal dysplasia with joint laxity germline 1 1232478 CCTTCCTGGCAGTGCTGGTGGCCAGCGCGCCCCGCGCCGCCGAGCGCCGCAGCGTGATCCG -1 459509 NM_000368.4(TSC1):c.2524C>T (p.Gln842Ter) TSC1 Mar 16, 2017 MedGen:C1854465,OMIM:191100 Tuberous sclerosis 1 germline 9 132900816 TTTGGTTAGCTCTCAAACAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTTGAACAGGCAGC 367683258 211950 NM_018006.4(TRMU):c.718C>T (p.Arg240Ter) TRMU Apr 02, 2014 MedGen:CN517202 not provided germline 22 46352276 GACATGTTTGTTTTCCAGTATCTGCAGCCTCGACCTGGTCACTTTATTTCCATAGAAGACA 118203999 16285 NM_024675.3(PALB2):c.2962C>T (p.Gln988Ter) PALB2 May 12, 2015 MedGen:CN068448;MedGen:C1835817,OMIM:610832;MedGen:C0027672,SNOMED CT:699346009 Breast cancer, susceptibility to;Fanconi anemia, complementation group N;Hereditary cancer-predisposing syndrome germline 16 23623003 GTTAGTAGCAGTGGGACCCTTTCTGATCAACAAGTAGAAGTCATGACGTTTGCAGAAGATG 777327250 259938 NM_006077.3(MICU1):c.553C>T (p.Gln185Ter) MICU1 Oct 10, 2017 MedGen:CN517202 not provided germline 10 72508260 TGGGACCCATACATTCTATAGAAAATTTCCCAGGAACGAGAAAAATTTGCTGATGAAGGCA 61749704 153556 NM_003159.2(CDKL5):c.539C>T (p.Pro180Leu) CDKL5 Mar 13, 2014 MedGen:C1839333,OMIM:300672 Early infantile epileptic encephalopathy 2 unknown X 18584338 AGTACGTTGCCACCAGATGGTATCGGTCCCCAGAACTCTTACTTGGGTGAGTTACCGTCCC 797045016 205034 NM_022406.3(XRCC4):c.823C>T (p.Arg275Ter) XRCC4 Jul 01, 2015 MedGen:C4225288,OMIM:616541 Short stature, microcephaly, and endocrine dysfunction germline 5 83258607 GATATTGCACCAAGTAGAAAAAGGAGACAGCGAATGCAAAGAAATCTTGGGACAGAACCTA 7769409 27191 NM_000500.7(CYP21A2):c.1069C>T (p.Arg357Trp) CYP21A2 Jan 16, 2015 MedGen:C0852654,OMIM:201910;MedGen:C0852654,OMIM:201910 21-hydroxylase deficiency;21-hydroxylase deficiency germline;unknown 6 32040535 AATGCCACCATCGCCGAGGTGCTGCGCCTGCGGCCCGTTGTGCCCTTAGCCTTGCCCCACC 200180113 24572 NM_194442.2(LBR):c.1114C>T (p.Arg372Cys) LBR Jun 01, 2010 MedGen:C0748397,OMIM:613471,Orphanet:ORPHA779 Reynolds syndrome germline 1 225411411 GGAAATGCTGTCTATGATTTCTTCATTGGCCGTGAATTAAACCCTCGAATTGGTACTTTTG 587783405 170101 NM_003159.2(CDKL5):c.622C>T (p.Gln208Ter) CDKL5 May 06, 2014 MedGen:C1839333,OMIM:300672 Early infantile epileptic encephalopathy 2 germline X 18588021 GGCTGTATTCTTGGGGAGCTTAGCGATGGACAGCCTTTATTTCCTGGAGAAAGTGAAATTG 879254658 245760 NM_000527.4(LDLR):c.724C>T (p.Gln242Ter) LDLR Mar 30, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline;not applicable 19 11106594 GCTGTGGCCACCTGTCGCCCTGACGAATTCCAGTGCTCTGATGGAAACTGCATCCATGGCA -1 467952 NM_002878.3(RAD51D):c.343C>T (p.Gln115Ter) RAD51D Jul 28, 2017 MedGen:C3280345,OMIM:614291 Breast-ovarian cancer, familial 4 germline 17 35107368 ATTGTAGGAGGCCCAGGTAGCGGCAAAACTCAGGTACATGTGAGGCCAGCAGTCAGGAGGA 397509151 69806 NM_007294.3(BRCA1):c.4201C>T (p.Gln1401Ter) BRCA1 Aug 11, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 1;Hereditary cancer-predisposing syndrome germline 17 43082560 TTATCGTTTTTGAAGCAGAGGGATACCATGCAACATAACCTGATAAAGCTCCAGCAGGAAA 876659654 233440 NM_005732.3(RAD50):c.3787C>T (p.Gln1263Ter) RAD50 Jun 08, 2015 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 5 132642212 ATAAAAAGTCGCTCACAGCAGCGTAACTTCCAGCTTCTGGTAATCACTCATGATGAAGATT 397514508 48072 NM_001567.3(INPPL1):c.1976C>T (p.Pro659Leu) INPPL1 Feb 04, 2013 MedGen:C0432219,OMIM:258480,Orphanet:ORPHA2746,SNOMED CT:254068007 Opsismodysplasia germline;inherited 11 72233099 CCTTAGGTGAGGAGGAGATCTCCTTCCCACCCACCTACCGCTATGAGCGGGGTTCCCGGGA -1 425631 NM_001135243.1(TCOF1):c.3031C>T (p.Gln1011Ter) TCOF1 Jun 06, 2017 MedGen:CN517202 not provided germline 5 150388073 AGCGAGGATGAGGACGTGATCCCCGCTACACAGTGCTTGACTCCTGGTGAGCGCAGCCCTT 797045000 204998 NM_005045.3(RELN):c.2531C>T (p.Pro844Leu) RELN Aug 27, 2015 MedGen:C4225327,OMIM:616436 Epilepsy, familial temporal lobe, 7 germline 7 103630111 AGTTTGGAATTCAGTTCAGATGGTGGCAACCGTATCATTCTTCCCAGAGAGAAGATGTATG 1131691540 421988 NM_005249.4(FOXG1):c.676C>T (p.Gln226Ter) FOXG1 Aug 19, 2015 MedGen:CN517202 not provided germline 14 28767955 CCTTACTACCGCGAGAACAAGCAGGGCTGGCAGAACTCCATCCGCCACAATCTGTCCCTCA 397515546 76572 NM_002381.4(MATN3):c.359C>T (p.Thr120Met) MATN3 Jul 25, 2013 MedGen:C1846843,OMIM:607078,Orphanet:ORPHA93311 Multiple epiphyseal dysplasia 5 not provided 2 20006175 TCGACACTCTGGACATTGGGCCAGCCGACACGCGGGTGGCAGTGGTGAACTATGCTAGCAC 121908150 19413 NM_001243133.1(NLRP3):c.778C>T (p.Arg260Trp) NLRP3 Oct 02, 2017 MedGen:C0268390,OMIM:191900,Orphanet:ORPHA575,SNOMED CT:15123008;MedGen:C0343068,OMIM:120100,Orphanet:ORPHA47045,SNOMED CT:238687000;MedGen:CN517202 Familial amyloid nephropathy with urticaria AND deafness;Familial cold urticaria;not provided germline 1 247424227 AGGTTTGACTATCTGTTCTATATCCACTGTCGAGAGGTGAGCCTTGTGACACAGAGGAGCC 121434502 23402 NM_006267.4(RANBP2):c.1754C>T (p.Thr585Met) RANBP2 Dec 04, 2014 MedGen:C2675556,OMIM:608033,Orphanet:ORPHA88619 Encephalopathy, acute, infection-induced, 3, suceptibility to germline 2 108751993 TTGTACATTGGGCAGAATGCCTTCAGAAAACGGTGAGTTTTAAAGTATAAGCATTTTTAAA 876658694 236538 NM_005359.5(SMAD4):c.931C>T (p.Gln311Ter) SMAD4 Mar 04, 2015 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 18 51059892 TTAGGGCCTGTTCACAATGAGCTTGCATTCCAGCCTCCCATTTCCAATCATCCTGGTAAGT 132630293 26130 NM_001128834.2(PLP1):c.725C>T (p.Ala242Val) PLP1 Feb 03, 1998 MedGen:C4016483 Pelizaeus-Merzbacher disease, connatal germline X 103789361 AGTTCCAAATGACCTTCCACCTGTTTATTGCTGCATTTGTGGGGGCTGCAGCTACACTGGT 1057517675 359104 NM_002936.4(RNASEH1):c.554C>T (p.Ala185Val) RNASEH1 Jul 29, 2015 MedGen:C4225312,OMIM:616479,Orphanet:ORPHA329336 Progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal recessive 2 germline 2 3549068 GACTTCCTGGGCGGCAGACAAACCAAAGAGCGGAAATTCATGTAAGTTATCAGATACGTTT 1057519262 361735 NM_004341.4(CAD):c.1843-3C>T CAD Sep 08, 2017 MedGen:C4225320,OMIM:616457,Orphanet:ORPHA448010 Epileptic encephalopathy, early infantile, 50 germline;maternal 2 27226128 TGGCAGTGACCTCCATGGCACCCCCCTTCACAGGTGTGTAACATGGAGAACTTGGACCCAC 121908540 21003 NM_006996.2(SLC19A2):c.152C>T (p.Pro51Leu) SLC19A2 Mar 15, 2004 MedGen:C0342287,OMIM:249270,Orphanet:ORPHA49827,SNOMED CT:237617006 Megaloblastic anemia, thiamine-responsive, with diabetes mellitus and sensorineural deafness germline 1 169485615 GCTTCTTCGCCAGCCTCAGGCCGTCCGAGCCCTTCCTGACCCCGTACCTGCTGGGGCCGGA 587784421 170162 NM_006306.3(SMC1A):c.547C>T (p.Gln183Ter) SMC1A Feb 08, 2013 MedGen:C1802395,OMIM:300590,SNOMED CT:55016009 Congenital muscular hypertrophy-cerebral syndrome germline X 53413300 AAGGAAATGGTGAAGGCTGAAGAGGACACACAGTTTAATTACCATCGCAAGAAAAATATTG 119461975 17973 NM_002076.3(GNS):c.1168C>T (p.Gln390Ter) GNS Nov 01, 2007 MedGen:C0086650,OMIM:252940,Orphanet:ORPHA79272,SNOMED CT:15892005 Mucopolysaccharidosis, MPS-III-D germline 12 64728988 GACATTGCTGGCTACGACCTAAATAAGACACAGATGGATGGGATGTCCTTATTGCCCATTT 750896617 247574 NM_017947.3(MOCOS):c.2326C>T (p.Arg776Cys) MOCOS Jul 27, 2016 MedGen:C1863688,OMIM:603592,Orphanet:ORPHA93602 Xanthinuria type 2 germline 18 36260092 TTCTCACTGAAGGATCTCAGCTTGCGTTTTCGTGCCAATATTATTATCAATGGAAAAAGGG 587781269 150486 NM_007194.3(CHEK2):c.283C>T (p.Arg95Ter) CHEK2 Aug 09, 2017 MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Familial cancer of breast;Hereditary cancer-predisposing syndrome;not provided germline;unknown 22 28734439 CCTGAGGAGCCTACCCCTGCCCCCTGGGCTCGATTATGGGCCCTTCAGGATGGATTTGCCA 531650682 360191 NM_000359.2(TGM1):c.427C>T (p.Arg143Cys) TGM1 Jul 02, 2015 MedGen:CN517202 not provided germline 14 24261776 GAGTATGAGTACGACGAGCTGATAGTGCGCCGCGGGCAGCCTTTCCATATGCTCCTCCTCC 137852526 25040 NM_000425.4(L1CAM):c.719C>T (p.Pro240Leu) L1CAM May 01, 2006 MedGen:C1839909,OMIM:304100,Orphanet:ORPHA1497;MedGen:C0265216,OMIM:307000,Orphanet:ORPHA2182,SNOMED CT:71779008 Corpus callosum, partial agenesis of, X-linked;X-linked hydrocephalus syndrome germline X 153870475 TGGCAGCCAACAGCATGATTGACAGGAAGCCGCGCCTGCTCTTCCCCACCAACTCCAGCAG 267606710 20743 NM_012120.2(CD2AP):c.1834C>T (p.Arg612Ter) CD2AP Nov 01, 2007 MedGen:CN068928 Focal segmental glomerulosclerosis 3 germline 6 47612492 TTTGTTTTTAGGAAAGAACTGGAAAAACTGCGAAAAGATTTGGAAGAAGAGAAGACAATGA 587779884 132948 NM_000057.3(BLM):c.2695C>T (p.Arg899Ter) BLM Jul 31, 2017 MedGen:C0005859,OMIM:210900,Orphanet:ORPHA125,SNOMED CT:4434006;MedGen:CN517202 Bloom syndrome;not provided germline;unknown 15 90784953 GATTCAGGGATAATTTACTGCCTCTCCAGGCGAGAATGTGACACCATGGCTGACACGTTAC 121908436 20617 NM_014112.4(TRPS1):c.2795C>T (p.Ala932Val) TRPS1 Jan 24, 2017 MedGen:C0432233,OMIM:190350,SNOMED CT:254091006;MedGen:C1860823,OMIM:190351 Trichorhinophalangeal dysplasia type I;Trichorhinophalangeal syndrome type 3 germline 8 115418358 AGAATGCAAATGGCGGATATGTATGCAACGCGTGTGGCCTCTACCAGAAGCTTCACTCGGT 368817785 101434 NM_013382.5(POMT2):c.1417C>T (p.Arg473Ter) POMT2 Jun 25, 2014 MedGen:CN517202 not provided germline 14 77285548 TTTGGAAACCGGATCAAAGTGCTGAGAAGTCGAATTCGCTTCATCCATTTGGTCACAGGTT 193922107 44389 NM_000053.3(ATP7B):c.3659C>T (p.Thr1220Met) ATP7B May 18, 2017 MedGen:C0019202,OMIM:277900,Orphanet:ORPHA905,SNOMED CT:88518009;MedGen:CN517202 Wilson disease;not provided germline;unknown 13 51939091 AGAGCATGGGTGTGGACGTGGTTCTGATCACGGGGGACAACCGGAAGACAGCCAGAGCTAT 397516416 52674 NM_000441.1(SLC26A4):c.1336C>T (p.Gln446Ter) SLC26A4 Mar 27, 2014 Human Phenotype Ontology:HP:0011387,MedGen:C1863752,OMIM:600791;MedGen:C0271829,OMIM:274600,Orphanet:ORPHA705,SNOMED CT:70348004;MedGen:C0271829,OMIM:274600,Orphanet:ORPHA705,SNOMED CT:70348004 Enlarged vestibular aqueduct;Pendred's syndrome;Pendred's syndrome germline;unknown 7 107694475 CTTGCCCTGGGGAAGCTTCTGGAACCCTTGCAGAAGGTATAACCCTGCTTCTCTGCATACC 1057518496 359455 NM_015265.3(SATB2):c.868C>T (p.Gln290Ter) SATB2 Dec 01, 2016 MedGen:CN517202 not provided germline 2 199349006 ACTCCAATCCGAAACCAAGTGCCCGCATTACAGCCCATCATGAGCCCTGGTCTTCTTTCTC 369607332 213810 NM_003494.3(DYSF):c.3112C>T (p.Arg1038Ter) DYSF Jul 18, 2017 MedGen:C2931687,Orphanet:ORPHA207073;MedGen:C1850889,OMIM:253601,Orphanet:ORPHA268;MedGen:CN517202 Dysferlinopathy;Limb-girdle muscular dystrophy, type 2B;not provided germline 2 71570679 GTCCCTGCTGAGAAGATGTACTACACACACCGACGGCGGCGCTGGGTGCGCCTGCGCAGGA 121912637 20037 NM_021625.4(TRPV4):c.2396C>T (p.Pro799Leu) TRPV4 Jun 21, 2016 MedGen:C0265281,OMIM:156530,Orphanet:ORPHA2635,SNOMED CT:22764001;Human Phenotype Ontology:HP:0002652,MedGen:C0410528,SNOMED CT:105986008;MedGen:C3159322,OMIM:184095 Metatrophic dysplasia;Skeletal dysplasia;Spondyloepiphyseal dysplasia Maroteaux type germline;unknown 12 109784378 ACCAGAACTTGGGCATCATCAACGAGGACCCGGGCAAGAATGAGACCTACCAGTATTATGG 72650698 427042 NM_001171.5(ABCC6):c.1087C>T (p.Gln363Ter) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16202090 GCCGTGCTGATGTTCCTCTCAGCCTGCCTGCAAACGCTGTTTGAGCAGCAGAACATGTACA 193922402 44282 NM_000352.4(ABCC8):c.4306C>T (p.Arg1436Ter) ABCC8 Jan 29, 2015 MedGen:C3888018,Orphanet:ORPHA276525;MedGen:C1257959,OMIM:256450,SNOMED CT:360339005 Familial hyperinsulinism;Persistent hyperinsulinemic hypoglycemia of infancy germline;unknown 11 17395611 CAGGACCCCGTCCTCTTCAGCGGCACCATCCGGTGAGCCCCACCACCCCTCAGGCCCACCC 398124598 102508 NM_183050.3(BCKDHB):c.853C>T (p.Arg285Ter) BCKDHB Aug 22, 2014 MedGen:C0024776,OMIM:248600,SNOMED CT:27718001 Maple syrup urine disease germline;unknown 6 80203114 TTTTTCTCTTTATTTCAGGTTCATGTGATCCGAGAGGTAGCTTCCATGGCAAAAGAAAAGC 267606928 22140 NM_001008211.1(OPTN):c.1192C>T (p.Gln398Ter) OPTN May 13, 2010 MedGen:C3150692,OMIM:613435 Amyotrophic lateral sclerosis type 12 germline 10 13125989 GTGCTACAGATGACACACAACAAGCTTCTTCAAGAACATAATAATGCATTGAAAACAATTG 63159160 18834 NM_000372.4(TYR):c.649C>T (p.Arg217Trp) TYR Jul 22, 2016 MedGen:C0268494,OMIM:203100,Orphanet:ORPHA79431,SNOMED CT:6483008;MedGen:CN517202 Tyrosinase-negative oculocutaneous albinism;not provided germline 11 89178602 TTTCTGCCTTGGCATAGACTCTTCTTGTTGCGGTGGGAACAAGAAATCCAGAAGCTGACAG -1 479576 NM_001128849.1(SMARCA4):c.1666C>T (p.Gln556Ter) SMARCA4 May 30, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 19 10996285 AAGGACAAGCGCCTGGCCTACCTCTTGCAGCAGACAGACGAGTACGTGGCTAACCTCACGG 141656719 177281 NM_000070.2(CAPN3):c.1468C>T (p.Arg490Trp) CAPN3 Jun 27, 2017 MedGen:C1869123,OMIM:253600,Orphanet:ORPHA267;MedGen:CN517202 Limb-girdle muscular dystrophy, type 2A;not provided germline;unknown 15 42401754 TTCCTGGTGGCCCTGATGCAGAAGAACCGGCGGAAGGACCGGAAGCTAGGGGCCAGTCTCT 376493409 214327 NM_025114.3(CEP290):c.4882C>T (p.Gln1628Ter) CEP290 May 02, 2017 Human Phenotype Ontology:HP:0000618,MedGen:C0456909;Human Phenotype Ontology:HP:0001263,MedGen:C4020875;MedGen:C1857780,OMIM:610188;MedGen:CN517202 Blindness;Global developmental delay;Joubert syndrome 5;not provided germline;unknown 12 88083161 AAGCATTTTATTCGTCTGGCTGAGATGGAACAGACAGTAGCAGAACAAGATGACTCTCTTT 876659517 233044 NM_000038.5(APC):c.1873C>T (p.Gln625Ter) APC Aug 22, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline 5 112835080 TTTTTGGTTGGCACTCTTACTTACCGGAGCCAGACAAACACTTTAGCCATTATTGAAAGTG 538591733 132029 NM_012338.3(TSPAN12):c.146C>T (p.Thr49Met) TSPAN12 May 14, 2012 MedGen:C2750079,OMIM:613310 Exudative vitreoretinopathy 5 germline 7 120840030 TAAATAATGTTCTCACTTTAACTGCAGAAACGAGGTATACTTTATAATTATTGATTGAATT 151177114 422474 NM_017745.5(BCOR):c.1024C>T (p.Arg342Ter) BCOR May 05, 2017 MedGen:CN517202 not provided germline X 40074322 CTGTTGCCCCCCTCGCCTCGGCCGTCACCCCGAGTCCACCTTCCCACCCAGCCTGCTGCAG 122453121 26733 NM_004484.3(GPC3):c.1159C>T (p.Arg387Ter) GPC3 Apr 01, 2016 MedGen:C0796154,OMIM:312870,Orphanet:ORPHA373,SNOMED CT:439143004 Simpson-Golabi-Behmel syndrome germline X 133699902 CATGTAGAACATGAAGAAACCTTATCCAGCCGAAGAAGGTGAGAGGTTTCTTTTTTCTTTA 375113643 106544 NM_024790.6(CSPP1):c.658C>T (p.Arg220Ter) CSPP1 Feb 23, 2015 MedGen:C3810212,OMIM:615636 Joubert syndrome 21 germline;unknown 8 67095440 GAGGCATATGAAGAACTTCTGAACCAAAGACGACTAGAGGAGGACAGATACCGACAACTAG 111231312 51536 NM_000138.4(FBN1):c.4615C>T (p.Arg1539Ter) FBN1 Aug 30, 2017 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:CN118826,Orphanet:ORPHA91387;MedGen:CN118826,Orphanet:ORPHA91387;MedGen:CN517202 Marfan syndrome;Marfan syndrome;Thoracic aortic aneurysm and aortic dissection;Thoracic aortic aneurysm and aortic dissection;not provided germline 15 48468070 ACCCGCTCTGGAAATTGCTATTTGGATATTCGACCTCGAGGAGACAATGGAGATACAGCCT 886044763 237632 NM_000350.2(ABCA4):c.6647C>T (p.Ala2216Val) ABCA4 Jan 01, 2016 MeSH:C535804,MedGen:C1855465,OMIM:248200 Stargardt disease 1 germline;unknown 1 93997943 TCCAGTTCCAGGTCTCCTCCTCCTCCCTGGCGAGGATCTTCCAGCTCCTCCTCTCCCACAA 128624224 26346 NM_000033.3(ABCD1):c.1552C>T (p.Arg518Trp) ABCD1 Oct 15, 2013 MedGen:C0162309,OMIM:300100,Orphanet:ORPHA43,SNOMED CT:65389002 Adrenoleukodystrophy germline X 153740155 CCCAATGGCTGCGGCAAGAGCTCCCTGTTCCGGATCCTGGGTGGGCTCTGGCCCACGTACG 28940573 17685 NM_000391.3(TPP1):c.616C>T (p.Arg206Cys) TPP1 Feb 01, 2000 MedGen:C1876161,OMIM:204500,Orphanet:ORPHA228349 Ceroid lipofuscinosis neuronal 2 germline 11 6617046 CTGCATCTGGGGGTAACCCCCTCTGTGATCCGTAAGCGATACAACTTGACCTCACAAGACG 200056620 101351 NM_007171.3(POMT1):c.1153C>T (p.Gln385Ter) POMT1 Dec 13, 2017 MedGen:C3150415,OMIM:613155;MedGen:CN033898,OMIM:236670;MedGen:CN517202 Congenital muscular dystrophy-dystroglycanopathy with mental retardation, type B1;Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type a, 1;not provided germline;paternal 9 131513243 GGTCCCGACAGCACTGTGTCTTCCAGGCACCAGCTGGTGGTGAGCAGCCCTCCGAGACCTG 121908092 19318 NM_018648.3(NOP10):c.100C>T (p.Arg34Trp) NOP10 May 10, 2012 MedGen:C1857144,OMIM:224230 Dyskeratosis congenita autosomal recessive 1 germline 15 34342063 GGACAACAGACCTGCTCAGCCCATCCTGCTCGGTTCTCCCCAGATGACAAATACTCTCGAC 80357134 69569 NM_007294.3(BRCA1):c.34C>T (p.Gln12Ter) BRCA1 Feb 13, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145;MedGen:CN517202 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome;not provided germline;unknown 17 43124063 GATTTATCTGCTCTTCGCGTTGAAGAAGTACAAAATGTCATTAATGCTATGCAGAAAATCT -1 426745 NM_015335.4(MED13L):c.2059C>T (p.Gln687Ter) MED13L May 09, 2016 MedGen:C4225208,OMIM:616789,Orphanet:ORPHA369891 Mental retardation and distinctive facial features with or without cardiac defects de novo 12 116007590 AACAAACGGTTTAAAATCTGGCAAGACAAACAGCCCCAGTTGCAGCCACTCCACTTCCTTG 886040985 262648 NM_017780.3(CHD7):c.3205C>T (p.Arg1069Ter) CHD7 Oct 27, 2017 MedGen:C0265354,OMIM:214800,Orphanet:ORPHA138,SNOMED CT:47535005 CHARGE association de novo;germline 8 60823843 AATAATAATTCAGAGTTGTTCTTATAGGGTCGAGTGATAAAGGGGTCCTATAAGTTTCATG 752143061 434869 NM_024417.4(FDXR):c.916C>T (p.Arg306Cys) FDXR Oct 12, 2017 MedGen:CN533577,OMIM:617717 AUDITORY NEUROPATHY AND OPTIC ATROPHY germline 17 74864234 CAGGCATCGGCCTCCCGTGCCTGGGGCCTCCGCTTTTTCCGAAGCCCCCAGCAGGTGCTGC 864321712 217263 NM_172107.3(KCNQ2):c.319C>T (p.Leu107Phe) KCNQ2 - MedGen:C1852587,OMIM:121200 Benign familial neonatal seizures 1 de novo 20 63446815 GCCCCCAGGTTCCTCCTGGTTTTCTCCTGCCTCGTGCTGTCTGTGTTTTCCACCATCAAGG 63750792 95862 NM_000249.3(MLH1):c.83C>T (p.Pro28Leu) MLH1 May 03, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Hereditary cancer-predisposing syndrome;Lynch syndrome germline 3 36993630 GCATCGCGGCGGGGGAAGTTATCCAGCGGCCAGCTAATGCTATCAAAGAGATGATTGAGAA 104893880 19555 NM_006005.3(WFS1):c.676C>T (p.Gln226Ter) WFS1 Dec 01, 1998 MedGen:C0043207,OMIM:222300,Orphanet:ORPHA3463,SNOMED CT:70694009 Diabetes mellitus AND insipidus with optic atrophy AND deafness germline 4 6291961 CCAGGCCCCGTGCCCAAGTCCCTGCAGAAGCAGAGGCGCATGCTGGAGCGCCTGGTCAGCA 1057520738 364846 NM_006147.3(IRF6):c.454C>T (p.Gln152Ter) IRF6 May 14, 2015 MedGen:CN517202 not provided germline 1 209795344 GATGAAGAAGATGAGGAAGATGAGCTGGATCAGTCGCAGCACCATGTTCCCATCCAGGACA 587777105 102966 NM_001013703.3(EIF2AK4):c.3406C>T (p.Arg1136Ter) EIF2AK4 Feb 12, 2014 MedGen:C0340848,OMIM:234810,SNOMED CT:234161007 Familial pulmonary capillary hemangiomatosis germline 15 40007064 GTGGCAAGAAATAATATATTGAATTTAAAACGGTAAGAAACAATAGGAGATTCCATTTGGT 113090017 217181 NM_005123.3(NR1H4):c.526C>T (p.Arg176Ter) NR1H4 Dec 17, 2015 MedGen:C4310747,OMIM:617049;MedGen:C0268312,OMIM:211600,Orphanet:ORPHA172,SNOMED CT:74162007 Cholestasis, progressive familial intrahepatic, 5;Progressive intrahepatic cholestasis germline;inherited 12 100532538 GGGGGCAACTGTGTGATGGATATGTACATGCGAAGAAAGTGTCAAGAGTGTCGACTAAGGA 397514556 48260 NM_000834.4(GRIN2B):c.1658C>T (p.Pro553Leu) GRIN2B Aug 11, 2017 MedGen:C3151411,OMIM:613970 Mental retardation, autosomal dominant 6 germline 12 13611847 TGAGCACTGCTTTTTTCCCTTCCTCAGAGCCATTCAGCGCTGACGTATGGGTGATGATGTT 1114167445 361955 NM_020971.2(SPTBN4):c.1597C>T (p.Gln533Ter) SPTBN4 Jul 10, 2017 MedGen:CN251650,OMIM:617519;MedGen:CN517202 Myopathy, congenital, with neuropathy and deafness;not provided germline;inherited 19 40504064 CTTGTGGGTGCCCGGCGGACACGACTTGAGCAGAACCTTGCCCTGCAGAAGGTCTTCCAGG 397507860 66781 NM_000059.3(BRCA2):c.6490C>T (p.Gln2164Ter) BRCA2 May 26, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome germline;unknown 13 32340845 TATCTCTCTCAATTTCAACAAGACAAACAACAGTTGGTATTAGGAACCAAAGTGTCACTTG 756998312 263941 NM_002016.1(FLG):c.4786C>T (p.Gln1596Ter) FLG Apr 25, 2016 MedGen:CN517202 not provided germline 1 152310100 ACAAGCAGGCGCCAGGGATCCAGTGTTAGTCAGGACAGGGACAGTGAGGGACACTCAGAAG 61752067 24926 NM_000330.3(RS1):c.304C>T (p.Arg102Trp) RS1 Apr 28, 2017 MedGen:C0271091,OMIM:312700,Orphanet:ORPHA792,SNOMED CT:86923008;Human Phenotype Ontology:HP:0000556,MedGen:C0854723,Orphanet:ORPHA71862,SNOMED CT:314407005;MedGen:CN517202 Juvenile retinoschisis;Retinal dystrophy;not provided germline X 18647213 TGGTATTCTTCGTGGACTGCAAACAAGGCCCGGCTCAACAGTCAAGGCTTTGGGTAAGCAG 398124299 101610 NM_015560.2(OPA1):c.1669C>T (p.Arg557Ter) OPA1 Mar 15, 2017 MedGen:C0338508,OMIM:165500,Orphanet:ORPHA98672,SNOMED CT:2065009;MedGen:CN517202 Dominant hereditary optic atrophy;not provided germline 3 193647144 GCAGTATCAGACTGCTTTTGGAAAATGGTACGAGAGTCTGTTGAACAACAGGCTGATAGTT 137852428 25275 NM_000132.3(F8):c.1834C>T (p.Arg612Cys) F8 Mar 07, 2017 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008;MedGen:CN517202;MedGen:CN169374 Hereditary factor VIII deficiency disease;not provided;not specified germline X 154953961 CGAAGCTGGTACCTCACAGAGAATATACAACGCTTTCTCCCCAATCCAGCTGGAGTGCAGC 201785518 214881 NM_015114.2(ANKLE2):c.2344C>T (p.Gln782Ter) ANKLE2 Sep 25, 2014 Human Phenotype Ontology:HP:0000252,MedGen:C0424688;MedGen:C4225249,OMIM:616681 Microcephaly;Microcephaly 16, primary, autosomal recessive germline;maternal 12 132729818 AGAGACTTGTTAGAGCCTTCTCCCGCAGACCAACTCGGGAATGGCCACAGGAGGACAGAAA 137852815 26569 NM_003688.3(CASK):c.1915C>T (p.Arg639Ter) CASK Jul 07, 2016 MedGen:C2677903,OMIM:300749,Orphanet:ORPHA163937;MedGen:CN517202 Mental retardation and microcephaly with pontine and cerebellar hypoplasia;not provided germline X 41553843 GACCTCATCCCCTGTAAAGAAGCTGGCATTCGATTCAGAGTTGGTGACATCATCCAGATTA 63750316 95165 NM_000249.3(MLH1):c.1276C>T (p.Gln426Ter) MLH1 Jul 05, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Hereditary cancer-predisposing syndrome;Lynch syndrome germline 3 37025874 AAGACAGATATTTCTAGTGGCAGGGCTAGGCAGCAAGATGAGGAGATGCTTGAACTCCCAG 766920075 195148 NM_000426.3(LAMA2):c.7810C>T (p.Arg2604Ter) LAMA2 Aug 05, 2014 MedGen:C1263858,OMIM:607855,Orphanet:ORPHA258,SNOMED CT:111503008 Merosin deficient congenital muscular dystrophy germline 6 129486534 CGTCTGGAAGTGCATCTCTCCACAGGGGCACGAACAATGAGGAAAATTGTGATCAGACCAG 121908024 18722 NM_000527.4(LDLR):c.97C>T (p.Gln33Ter) LDLR Jun 04, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11100252 GTGGGCGACAGATGCGAAAGAAACGAGTTCCAGTGCCAAGACGGGAAATGCATCTCCTACA 121909224 22858 NM_000314.6(PTEN):c.388C>T (p.Arg130Ter) PTEN Oct 18, 2017 MedGen:C0265326,OMIM:153480,Orphanet:ORPHA109;MedGen:CN072330,OMIM:158350;MedGen:C0027672,SNOMED CT:699346009;MedGen:C1854416,OMIM:605309,Orphanet:ORPHA210548;Human Phenotype Ontology:HP:0030692,MeSH:D001932,MedGen:C0006118,SNOMED CT:126952004;MeSH:D010051,MedGen:CN236629;MedGen:C1959582,OMIM:601728,Orphanet:ORPHA306498;MedGen:CN517202;MedGen:CN169374 Bannayan-Riley-Ruvalcaba syndrome;Cowden syndrome 1;Hereditary cancer-predisposing syndrome;Macrocephaly/autism syndrome;Neoplasm of brain;Ovarian Neoplasms;PTEN hamartoma tumor syndrome;not provided;not specified de novo;germline;paternal;somatic;unknown 10 87933147 GCAGCAATTCACTGTAAAGCTGGAAAGGGACGAACTGGTGTAATGATATGTGCATATTTAT 762860653 213875 NM_004006.2(DMD):c.2368C>T (p.Gln790Ter) DMD Dec 31, 2013 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Duchenne muscular dystrophy germline X 32501767 GCCAGCAGATCAGCTCAGGCCCTGGTGGAACAGATGGTGAATGGTAATTACACGAGTTGAT 794726727 187766 NM_001165963.1(SCN1A):c.3730C>T (p.Gln1244Ter) SCN1A Dec 20, 2014 MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002 Severe myoclonic epilepsy in infancy de novo 2 166012258 TTATAGGCATTTGAAGATATATATATTGATCAGCGAAAGACGATTAAGACGATGTTGGAAT 886041473 264795 NM_000061.2(BTK):c.469C>T (p.Gln157Ter) BTK Dec 23, 2015 MedGen:CN517202 not provided germline X 101362612 TGGATCGATGGGCAGTATCTCTGCTGCTCTCAGACAGCCAAAAATGCTATGGGCTGCCAAA 587779097 96168 NM_000251.2(MSH2):c.1528C>T (p.Gln510Ter) MSH2 May 07, 2016 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Lynch syndrome germline 2 47466675 CTTGATTATCAAGGCTTGGACCCTGGCAAACAGATTAAACTGGATTCCAGTGCACAGTTTG 111033220 52668 NM_000441.1(SLC26A4):c.1229C>T (p.Thr410Met) SLC26A4 Jul 01, 2017 Human Phenotype Ontology:HP:0011387,MedGen:C1863752,OMIM:600791;Human Phenotype Ontology:HP:0011387,MedGen:C1863752,OMIM:600791;MedGen:C0271829,OMIM:274600,Orphanet:ORPHA705,SNOMED CT:70348004;MedGen:C0271829,OMIM:274600,Orphanet:ORPHA705,SNOMED CT:70348004;MedGen:CN517202 Enlarged vestibular aqueduct;Enlarged vestibular aqueduct;Pendred's syndrome;Pendred's syndrome;not provided germline;unknown 7 107690203 GTTTTGTGGCCACCACTGCTCTTTCCCGCACGGCCGTCCAGGAGAGCACTGGAGGAAAGAC 374950566 181683 NM_001128425.1(MUTYH):c.884C>T (p.Pro295Leu) MUTYH Jul 24, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1837991,OMIM:608456,Orphanet:ORPHA247798;MedGen:CN517202 Hereditary cancer-predisposing syndrome;MYH-associated polyposis;not provided germline 1 45332215 TAGGGGCCACAGTGTGTACCCCACAGCGCCCACTGTGCAGCCAGTGCCCTGTGGAGAGCCT 121909554 33055 NM_000488.3(SERPINC1):c.1273C>T (p.Arg425Cys) SERPINC1 Aug 30, 1988 MedGen:C0272375,OMIM:613118,Orphanet:ORPHA82,SNOMED CT:36351005 Antithrombin III deficiency germline 1 173904011 GCTGCAAGTACCGCTGTTGTGATTGCTGGCCGTTCGCTAAACCCCAACAGGGTGACTTTCA 121918127 15435 NM_019892.5(INPP5E):c.1879C>T (p.Gln627Ter) INPP5E Sep 01, 2009 MedGen:C1857802,OMIM:610156,Orphanet:ORPHA75858 MORM syndrome germline 9 136429731 GGAATTAAAAGACGGATTTCGAAGGAGATTCAGAGGCAGCAAGCACTACAGAGTCAGAACT 118203537 57953 NM_000368.4(TSC1):c.1498C>T (p.Arg500Ter) TSC1 Mar 21, 2017 MedGen:C1854465,OMIM:191100;MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000;MedGen:CN517202 Tuberous sclerosis 1;Tuberous sclerosis syndrome;not provided germline 9 132906080 ACCACAGCAGAGGCAGAGCCTGTGGTTCCTCGAGGAGGCTTTGACTCTCCCTTTTACCGAG 137854611 24430 NM_198056.2(SCN5A):c.2204C>T (p.Ala735Val) SCN5A Oct 06, 2016 MedGen:C1142166,Orphanet:ORPHA130,SNOMED CT:418818005;MedGen:CN029323,OMIM:601144 Brugada syndrome;Brugada syndrome 1 germline 3 38597787 TGTGCATCGTACTCAACACACTCTTCATGGCGCTGGAGCACTACAACATGACAAGTGAATT 760063197 359486 NM_000094.3(COL7A1):c.5047C>T (p.Arg1683Ter) COL7A1 Nov 17, 2016 MedGen:CN517202 not provided germline 3 48580586 GGAGACCAGGGAGATCCTGGAGAGGATGGACGAAATGTGAGTCCCAGCCTATGACTCCTCA 139675596 40180 NM_023073.3(CPLANE1):c.7477C>T (p.Arg2493Ter) CPLANE1 Jun 14, 2017 MedGen:C3553264,OMIM:614615 Joubert syndrome 17 germline;unknown 5 37165595 AAACTGAGGAGAAAACCAAATGTGACTTTTCGACCAGAGAATTCCATAATTAATAATGATG 1135401770 424614 NM_205768.2(ZBTB18):c.142C>T (p.Arg48Ter) ZBTB18 Aug 01, 2017 Gene:100190984,MedGen:C2676727,OMIM:612337 Mental retardation, autosomal dominant 22 de novo 1 244053916 CTGGTGGGAGATGCCCAGTTCCGAGCGCACCGAGCTGTACTGGCTTCATGCAGCATGTATT 886041291 264914 NM_001396.3(DYRK1A):c.787C>T (p.Arg263Ter) DYRK1A Oct 06, 2016 MedGen:CN517202 not provided germline 21 37490297 AATTTCCGAGGGGTCTCTTTGAACCTAACACGAAAGTTTGCGCAACAGATGTGCACTGCAC 104894908 26016 NM_000475.4(NR0B1):c.109C>T (p.Gln37Ter) NR0B1 Jan 01, 2003 MedGen:C0342482,OMIM:300200,SNOMED CT:237764004 Congenital adrenal hypoplasia, X-linked germline X 30309255 CCTGAGGCTCCAGAGACGCGGCTGGTGGATCAGTGCTGGGGCTGTTCGTGCGGCGATGAGC 1057521145 379729 NM_020436.4(SALL4):c.2491C>T (p.Arg831Ter) SALL4 Jan 23, 2017 MedGen:CN517202 not provided germline 20 51789112 GGTCGGAGCAGTCTCCCTTCCACGTTTATCCGAGCCCCGCCGACCTATGTCAAGGTTGAAG 587783535 169916 NM_178151.2(DCX):c.232C>T (p.Arg78Cys) DCX Feb 08, 2013 Human Phenotype Ontology:HP:0002282,MedGen:C0008519 Heterotopia germline X 111410167 ATTGTGTACGCTGTGTCCTCTGACCGTTTTCGCAGCTTTGACGCCTTGCTGGCTGACCTGA 199422238 24816 NM_004187.3(KDM5C):c.2296C>T (p.Arg766Trp) KDM5C Feb 15, 2008 MedGen:C1845243,OMIM:300534,Orphanet:ORPHA85279 Mental retardation, syndromic, Claes-Jensen type, X-linked germline X 53198836 CTTCCTGCCATGCTGCATAAGCTGAAGGTTCGGGCTGAGTCCTTTGACACCTGGGCCAACA 387906484 25896 NM_000276.3(OCRL):c.2530C>T (p.Arg844Ter) OCRL Apr 01, 1993 MedGen:C0028860,OMIM:309000,Orphanet:ORPHA534,SNOMED CT:79385002 Lowe syndrome germline X 129589905 AATGTTTTCCGTTACTTGATGGCATTCCTTCGAGAACTCTTAAAATTCTCTGAATACAATA 869320659 227110 NM_000206.2(IL2RG):c.676C>T (p.Arg226Cys) IL2RG Jan 27, 2017 MedGen:C1279481,OMIM:300400,SNOMED CT:203592006;MedGen:CN517202 X-linked severe combined immunodeficiency;not provided germline X 71109309 CAGAAACGCTACACGTTTCGTGTTCGGAGCCGCTTTAACCCACTCTGTGGAAGTGCTCAGC 797045202 206608 NM_024531.4(SLC52A2):c.1088C>T (p.Pro363Leu) SLC52A2 Mar 17, 2015 MedGen:C3553538,OMIM:614707 Brown-Vialetto-Van Laere syndrome 2 germline 8 144360676 TGATGGCGCTGGCAGTCCTGAGCCCCTGCCCGCCCCTGGTGGGCACCTCGGCGGGGGTGGT -1 443452 NM_001904.3(CTNNB1):c.337C>T (p.Gln113Ter) CTNNB1 Aug 29, 2017 MedGen:CN517202 not provided germline 3 41225049 TTAGATGAGGGCATGCAGATCCCATCTACACAGTTTGATGCTGCTCATCCCACTAATGTCC 199473682 39960 NM_025099.5(CTC1):c.3583C>T (p.Arg1195Ter) CTC1 Mar 09, 2012 MedGen:C2677299,OMIM:612199 Cerebroretinal microangiopathy with calcifications and cysts 1 germline 17 8228251 CCTTTCCTGACTCACGTGAACCCCAGGCTCCGATTGTCCTGCCTTTCTATCCGAGAGTCAG 199422165 34440 NM_018136.4(ASPM):c.4795C>T (p.Arg1599Ter) ASPM Feb 08, 2013 MedGen:C1837501,OMIM:608716 Primary autosomal recessive microcephaly 5 germline 1 197104456 TTTCAGGCACATGTAAGAAAACATCAACAACGACAGAAATATAAGAAGATGAAGAAAGCAG -1 482046 NM_001170629.1(CHD8):c.2626C>T (p.Arg876Ter) CHD8 Dec 26, 2017 MedGen:CN517202 not provided germline 14 21408416 GCCCCACTGTCCACAATTACTAACTGGGAGCGAGAATTTAATACATGGACAGAAATGAACA 387906616 38623 NM_000165.4(GJA1):c.31C>T (p.Leu11Phe) GJA1 Jun 01, 2011 MedGen:C0812437,OMIM:164200 Oculodentodigital dysplasia germline 6 121446878 ATGGGTGACTGGAGCGCCTTAGGCAAACTCCTTGACAAGGTTCAAGCCTACTCAACTGCTG 121964971 15169 NM_000071.2(CBS):c.1397C>T (p.Ser466Leu) CBS Aug 01, 2008 na HYPERHOMOCYSTEINEMIA, THROMBOTIC, CBS-RELATED germline 21 43058215 TGGGAATGGTGACGCTTGGGAACATGCTCTCGTCCCTGCTTGCCGGGAAGGTGCAGCCGTC 757027813 204021 NM_133499.2(SYN1):c.1264C>T (p.Arg422Ter) SYN1 Apr 15, 2013 MedGen:CN517202 not provided germline X 47575169 AACAAGATGGCTCAGGCCCTGCCCCGGCAGCGACAGCGGGATGCCTCCCCTGGCAGGGGCT 1057517793 360587 NM_000444.5(PHEX):c.1180C>T (p.Gln394Ter) PHEX May 27, 2016 MedGen:CN517202 not provided germline X 22114464 ATCTGGATCAATTATCTCCCACAGGTAATCCAGGGGACCACAACTTTGCTGCCTCAATGGG 878854224 243225 NM_001128849.1(SMARCA4):c.4339C>T (p.Arg1447Ter) SMARCA4 Feb 26, 2016 MedGen:C2750074,OMIM:613325 Rhabdoid tumor predisposition syndrome 2 germline 19 11041379 CGGCAGAAGAAATCATCACGGAAGCGCAAGCGAGACAGCGACGCCGGCTCCTCCACCCCGA 750586158 182646 NM_005732.3(RAD50):c.3598C>T (p.Arg1200Ter) RAD50 Jun 27, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 5 132638203 AAGGGAGACACAGCCTTGGATATGCGAGGACGATGCAGTGCTGGACAAAAGGCAGGTATCT 796053373 202328 NM_003165.3(STXBP1):c.1651C>T (p.Arg551Cys) STXBP1 Jan 18, 2017 MedGen:C2677326,OMIM:612164;MedGen:CN517202 Early infantile epileptic encephalopathy 4;not provided germline 9 127682509 ATCCTTGGGGGTGTGAGCCTGAATGAGATGCGCTGCGCCTACGAGGTGACCCAGGCCAACG 797045165 205686 NM_006767.3(LZTR1):c.850C>T (p.Arg284Cys) LZTR1 Jun 01, 2015 MedGen:C4225280,OMIM:616564 Noonan syndrome 10 germline 22 20991686 CTCCGGGGCTCCCCACCACCCCCGCAGCGGCGCTACGGGCATACCATGGTGGCCTTTGACC 9332960 428054 NM_000348.3(SRD5A2):c.16C>T (p.Gln6Ter) SRD5A2 Sep 22, 2017 MedGen:C0268297,OMIM:264600,Orphanet:ORPHA753,SNOMED CT:57514000;MedGen:CN517202 3-Oxo-5 alpha-steroid delta 4-dehydrogenase deficiency;not provided germline 2 31580885 GAGGAACACGGCGCGATGCAGGTTCAGTGCCAGCAGAGCCCAGTGCTGGCAGGCAGCGCCA 137853003 214844 NM_001142772.1(PCDH15):c.400C>T (p.Arg134Ter) PCDH15 Feb 26, 2016 MedGen:C1865885,OMIM:602083 Usher syndrome, type 1F inherited;unknown 10 54369194 AAAGTGGGCACTATTATCTACCATGAAGTGCGAATAGTGGTGAGAGACAGGAATGACAACT 121434316 16853 NM_152594.2(SPRED1):c.637C>T (p.Gln213Ter) SPRED1 Jul 01, 2009 MedGen:C1969623,OMIM:611431,Orphanet:ORPHA137605 Legius syndrome germline 15 38349476 GACATTCAGAGCAGAAGTATGGAATACGTACAGCGGCAAATATCCAAGGAATGTGGAAGCC 119478057 19811 NM_017429.2(BCO1):c.509C>T (p.Thr170Met) BCO1 Nov 01, 2007 MedGen:C2676023,OMIM:115300 Hypercarotenemia and vitamin a deficiency, autosomal dominant germline 16 81264677 ATCGTAAATACGTGGCGGTAAATCTGGCAACGTCACATCCCCATTATGATGAGGCTGGAAA 886041902 265036 NM_006306.3(SMC1A):c.1192C>T (p.Arg398Ter) SMC1A Jul 21, 2016 MedGen:CN517202 not provided germline X 53411823 ACCCTGGCCCAGGAGCTGGAGAAATTCAATCGAGACCAGAAAGCTGACCAGGACCGTCTGG 398124042 100658 NM_004006.2(DMD):c.7189C>T (p.Gln2397Ter) DMD Sep 12, 2013 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009;MedGen:C3668940,OMIM:302045;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Becker muscular dystrophy;Dilated cardiomyopathy 3B;Duchenne muscular dystrophy germline X 31836729 CAGCATTTGTACAAGGAAAAACCAGCCACTCAGCCAGTGAAGGTAATGAAGCAACCTCTAG 118204028 16531 NM_001039141.2(TRIOBP):c.889C>T (p.Gln297Ter) TRIOBP Jan 01, 2006 MedGen:C1853276,OMIM:609823 Deafness, autosomal recessive 28 germline 22 37723445 AGGGACACCTCCAGGGCCTCATCCACCCAACAGGAAATCTCCAGGGCCTCATCCACCCAAC 917070773 404603 NM_000271.4(NPC1):c.2713C>T (p.Gln905Ter) NPC1 Sep 16, 2016 MedGen:C3179455,OMIM:257220 Niemann-Pick disease type C1 germline 18 23539893 GAAGGGCACGACTACACTTCTTCCAAGGGGCAGAACATGGTGTGCGGCGGCATGGGCTGCA 386833851 71045 NM_004260.3(RECQL4):c.2476C>T (p.Arg826Ter) RECQL4 May 22, 2017 MedGen:C0265308,OMIM:218600,Orphanet:ORPHA1225,SNOMED CT:77608001;MedGen:C1849453,OMIM:266280,Orphanet:ORPHA3021;MedGen:C0032339,OMIM:268400,Orphanet:ORPHA2909,SNOMED CT:69093006 Baller-Gerold syndrome;Rapadilino syndrome;Rothmund-Thomson syndrome germline 8 144513126 ATGAAAGTTGCCCTGCAGGGCGAAGACCTGCGAGAGCTGCGCAGACATGTGCACGCCGACA 387907159 40236 NM_058216.2(RAD51C):c.397C>T (p.Gln133Ter) RAD51C Jul 31, 2017 MedGen:C3150659,OMIM:613399;MedGen:C3150653,OMIM:613390;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 3;Fanconi anemia, complementation group O;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline;unknown 17 58695182 ATTTGTGGTGCACCAGGTGTTGGAAAAACACAATTATGGTAAAATAAAGTGTTCTCCTTTT 786204017 185782 NM_005957.4(MTHFR):c.760C>T (p.Pro254Ser) MTHFR - MedGen:C1856058,OMIM:236250 Homocysteinemia due to MTHFR deficiency germline 1 11796226 ACCGACATGGGCATCACTTGCCCCATCGTCCCCGGGATCTTTCCCATCCAGGTGAGGGGCC 886038963 258920 NM_000138.4(FBN1):c.1807C>T (p.Gln603Ter) FBN1 Nov 21, 2014 MedGen:CN118826,Orphanet:ORPHA91387 Thoracic aortic aneurysm and aortic dissection germline 15 48508612 AGTTTTAAATGTATTTGCAAACCTGGATTCCAGCTGGCATCAGATGGACGTTATTGCAAAG 372781135 190179 NM_013328.3(PYCR2):c.355C>T (p.Arg119Cys) PYCR2 May 07, 2015 MedGen:C4225332,OMIM:616420 Leukodystrophy, hypomyelinating, 10 germline 1 225922043 ATGGCATTCCAGCCAGCCCCCAAAGTGATTCGCTGCATGACCAACACACCTGTGGTAGTGC 869025571 224674 NM_014159.6(SETD2):c.820C>T (p.Gln274Ter) SETD2 Oct 21, 2016 MedGen:C4085873,OMIM:616831 Luscan-lumish syndrome germline 3 47123816 GAAGAACACGTAACTCAAATATTGAATGAGCAAGCAGATATTTCCTCAAAAAAAGAAGATT 122456134 26654 NM_005183.3(CACNA1F):c.2905C>T (p.Arg969Ter) CACNA1F Jan 01, 2015 Human Phenotype Ontology:HP:0007642,MedGen:C0339535,Orphanet:ORPHA215,SNOMED CT:232061009;MedGen:C1848172,OMIM:300071 Congenital stationary night blindness;Congenital stationary night blindness, type 2A germline;unknown X 49218511 TCCAGCGCCATCTCGGTGGTGAAGATTCTGCGAGTACTCCGAGTACTGCGGCCCCTCCGAG 267608688 40119 NM_018082.5(POLR3B):c.1648C>T (p.Arg550Ter) POLR3B Aug 02, 2012 MedGen:C3280644,OMIM:614381 Hypomyelinating leukodystrophy 8, with or without oligodontia and/or hypogonadotropic hypogonadism germline 12 106433739 TTTTGCCTAGGTAACATCTTAGGTGTCATTCGAGACCACAAAAAGCTAGTGAATACATTTC 1064796669 407829 NM_001005463.2(EBF3):c.907C>T (p.Arg303Ter) EBF3 Mar 03, 2017 MedGen:CN517202 not provided germline 10 129867246 TTTTTGTAGCTGATAACTCCCCATGCCATCCGAGTCCAGACCCCGCCGAGGCACATTCCTG 121918547 20078 NM_015665.5(AAAS):c.934C>T (p.Arg312Ter) AAAS Nov 01, 2000 MedGen:C0271742,OMIM:231550,Orphanet:ORPHA869,SNOMED CT:45414006 Glucocorticoid deficiency with achalasia germline 12 53309158 ATCCTGGCTACCACTCCTTCAGCTGTCTTTCGGTGAGTGGGACAAGGATGGAGGGAGGGCA 111033297 53892 NM_004004.5(GJB2):c.169C>T (p.Gln57Ter) GJB2 May 18, 2017 MedGen:C2673759,OMIM:220290;MedGen:CN043648,Orphanet:ORPHA87884;MedGen:CN169374 Deafness, autosomal recessive 1A;Nonsyndromic hearing loss and deafness;not specified germline 13 20189413 GAGCAGGCCGACTTTGTCTGCAACACCCTGCAGCCAGGCTGCAAGAACGTGTGCTACGATC 397515337 15099 NM_006642.4(SDCCAG8):c.740+356C>T SDCCAG8 Jun 26, 2017 MedGen:C3889474,OMIM:615993 Bardet-Biedl syndrome 16 germline 1 243305133 GAGACCATCCTGGCCAACATGGTGAAACCCCGTTTCTACTAAAAATACAAAAATTAGCTGG 730881422 179951 NM_000465.3(BARD1):c.1996C>T (p.Gln666Ter) BARD1 Jul 27, 2017 MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Familial cancer of breast;Hereditary cancer-predisposing syndrome;not provided germline 2 214730416 GGTCCACGCAGAAGCAGGCTCAACAGAGAACAGCTGGTATTTTTCTTTTAATACAACTTTC 1057517681 359133 NM_207421.4(PADI6):c.1141C>T (p.Gln381Ter) PADI6 Dec 02, 2016 MedGen:C4310659,OMIM:617234 Preimplantation embryonic lethality 2 germline 1 17394041 AAGACAACGTCCTTGATCCTCGACACACCTCAGGCCGCCGATCTCGATGAGTTCCCCATGA 104894189 22285 NM_033022.3(RPS24):c.46C>T (p.Arg16Ter) RPS24 Jun 25, 2009 MedGen:C1857719,OMIM:610629 Diamond-Blackfan anemia 3 germline 10 78035394 ACTATCCGCACTAGAAAGTTCATGACCAACCGACTACTTCAGAGGAAACAAATGGTAAGGA 774847203 443651 NM_000038.5(APC):c.4831C>T (p.Gln1611Ter) APC May 16, 2017 MedGen:CN517202 not provided germline 5 112840425 TTACCTCCACCTGTGGCAAGGAAACCAAGTCAGCTGCCTGTGTACAAACTTCTACCATCAC 200712760 405037 NM_206933.2(USH2A):c.8167C>T (p.Arg2723Ter) USH2A Sep 18, 2017 MedGen:CN517202 not provided germline 1 215888482 GCTTGGGTAGAAGTTACCACAAGACCCTCACGACCTGCTGGGGTGCAGCCACCTGTGGTGA 769523686 475884 NM_000051.3(ATM):c.7921C>T (p.Gln2641Ter) ATM Sep 22, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 11 108332894 GCAAACTTAGATGCCACTCAGTGGAAGACTCAGAGAAGTATGTTTTTTTTAAAGAAGAAAC 5030857 98638 NM_000277.2(PAH):c.1208C>T (p.Ala403Val) PAH Jul 14, 2017 MedGen:C0031485,OMIM:261600,Orphanet:ORPHA716,SNOMED CT:154735006;MedGen:CN517202 Phenylketonuria;not provided germline;unknown 12 102840507 AAGCCTGTGGTTTTGGTCTTAGGAACTTTGCTGCCACAATACCTCGGCCCTTCTCAGTTCG 587784096 168155 NM_022455.4(NSD1):c.3091C>T (p.Arg1031Ter) NSD1 Apr 11, 2015 MedGen:CN035106,OMIM:117550;MedGen:CN517202 Sotos syndrome 1;not provided germline 5 177211490 TGTGGACGATCAAAGCCTTCATCCAAATTGCGAGATGCTTTTTCAGCCCAAATGGTAAAGA 587778872 79367 NM_020989.3(CRYGC):c.497C>T (p.Ser166Phe) CRYGC Jan 09, 2015 MedGen:C1852438,OMIM:604307;Human Phenotype Ontology:HP:0000519,MedGen:C1842324 Cataract, coppock-like;Congenital cataract unknown 2 208128231 ACTGGGGGGCCATGGATGCTAAGGCAGGCTCTTTGCGGAGAGTGGTGGATTTGTATTAAAA 267607070 21593 NM_001128844.1(SMARCA4):c.3565C>T (p.Arg1189Ter) SMARCA4 Feb 12, 2010 MedGen:C2750074,OMIM:613325 Rhabdoid tumor predisposition syndrome 2 germline 19 11033308 CTCTTCCCCCAGGACCTGCAAGCGCAGGACCGAGCCCACCGCATCGGGCAGCAGAACGAGG 111033746 36568 NM_000155.3(GALT):c.634C>T (p.Gln212Ter) GALT Dec 18, 2014 MedGen:C0268151,OMIM:230400,Orphanet:ORPHA79239,SNOMED CT:124354006 Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase germline;unknown 9 34648403 GAGGAGCGATCTCAGCAGGCCTATAAGAGTCAGCATGGAGAGCCCCTGCTAATGGAGTACA 864321626 216912 NM_006290.3(TNFAIP3):c.811C>T (p.Arg271Ter) TNFAIP3 Nov 07, 2017 MedGen:C4225218,OMIM:616744,Orphanet:ORPHA476102;MedGen:CN517202 Autoinflammatory syndrome, familial, Behcet-like;not provided germline 6 137877081 ACTTATGTATTATTTTTTTCCTTAGAAATCCGAGCTGTTCCACTTGTTAACAGAGACCGGG 370475970 414710 NM_005262.2(GFER):c.586C>T (p.Arg196Cys) GFER Apr 07, 2017 MedGen:C0751651,Orphanet:ORPHA68380 Mitochondrial diseases germline 16 1985996 TTCGACTGCTCAAAAGTGGATGAGCGCTGGCGCGACGGCTGGAAGGATGGCTCCTGTGACT 121913017 31819 NM_000400.3(ERCC2):c.2176C>T (p.Gln726Ter) ERCC2 Oct 01, 1994 MedGen:C0268138,OMIM:278730,SNOMED CT:68637004 Xeroderma pigmentosum, group D germline 19 45352223 GTGGCCAAGTACTTCCTGCGGCAGATGGCACAGCCCTTCCACCGGGTGAGGCCTGCGTCCC 116840805 23315 NM_033337.2(CAV3):c.314C>T (p.Pro105Leu) CAV3 Apr 15, 2012 MedGen:C1832567,OMIM:607801,Orphanet:ORPHA265;MedGen:C1832560;MedGen:CN517202 Limb-girdle muscular dystrophy, type 1C;Rippling muscle disease 2;not provided germline 3 8745725 TCTCCTTCTGCCACATCTGGGCGGTGGTGCCATGCATTAAGAGCTACCTGATCGAGATCCA 267606957 19887 NM_007254.3(PNKP):c.526C>T (p.Leu176Phe) PNKP Mar 01, 2010 MedGen:C3150667,OMIM:613402 Early infantile epileptic encephalopathy 10 germline 19 49864376 CAGGTGGCTGGCTTTGATCTGGACGGGACGCTCATCACCACACGCTCTGGGAAGGTCTTTC 754909135 362224 NM_018136.4(ASPM):c.5467C>T (p.Gln1823Ter) ASPM Apr 28, 2016 MedGen:C1837501,OMIM:608716 Primary autosomal recessive microcephaly 5 paternal 1 197103784 AGAGGTTATAAAGTACGCCAGCTAATCAAACAACAATCTATAGCTGCTCTTAAAATTCAGT 121908461 20878 NM_006790.2(MYOT):c.116C>T (p.Ser39Phe) MYOT May 05, 2017 MedGen:C1866785,OMIM:182920,Orphanet:ORPHA268129;MedGen:CN517202 Spheroid body myopathy;not provided germline 5 137870767 CCAGCTTCTCTAGCCAGACCAAACAGTCTTCCATTATCATCCAGCCCCGCCAGTGTACAGA 1057519484 362194 NM_153427.2(PITX2):c.191C>T (p.Pro64Leu) PITX2 Nov 18, 2014 MedGen:C3714873,OMIM:180500 Axenfeld-Rieger syndrome type 1 maternal 4 110621225 TGGAGGCCACTTTCCAGAGGAACCGCTACCCGGACATGTCCACACGCGAAGAAATCGCTGT -1 471931 NM_000044.4(AR):c.268C>T (p.Gln90Ter) AR Jul 17, 2017 MedGen:C0039585,OMIM:300068,SNOMED CT:12313004 Androgen resistance syndrome germline X 67545414 CAAGAGACTAGCCCCAGGCAGCAGCAGCAGCAGCAGGGTGAGGATGGTTCTCCCCAAGCCC 879255621 247485 NM_001145357.1(SIN3A):c.3310C>T (p.Arg1104Ter) SIN3A Aug 12, 2016 Gene:100502567,MedGen:C3150674,OMIM:613406 Witteveen-kolk syndrome germline 15 75380702 CCATCTTAGCGCTGGTCAGACTACGTGGAGCGATACATGAATTCAGATACTACCTCGCCTG 1060499668 384434 NM_017519.2(ARID1B):c.1735C>T (p.Gln579Ter) ARID1B Jun 01, 2016 MedGen:C1303073,OMIM:601358,Orphanet:ORPHA3051,SNOMED CT:401046009 Nicolaides-Baraitser syndrome de novo 6 156829419 GCCATGGCCGGAATGCAGTACCCTCAGCAGCAGGTTTGTGCTGGTCCCCCGACCCGCTGCT 121918168 15997 NM_000275.2(OCA2):c.1001C>T (p.Ala334Val) OCA2 Jan 01, 2000 MedGen:C0268495,OMIM:203200,Orphanet:ORPHA79432,SNOMED CT:26336006 Tyrosinase-positive oculocutaneous albinism germline 15 28014819 GCGGAAGTGTAGAAACCCAGGTGACCATCGCGACGGCCATCCTCGCGGGCGTCTACGCGCT 869312118 225115 NM_001267550.2(TTN):c.83515C>T (p.Arg27839Ter) TTN Nov 30, 2016 MedGen:C1858763,OMIM:604145;EFO:EFO_0000407,Human Phenotype Ontology:HP:0001644,MedGen:C0007193,Orphanet:ORPHA217604,SNOMED CT:195021004 Dilated cardiomyopathy 1G;Primary dilated cardiomyopathy germline 2 178562617 AATCTACAAGAAGGATGTTCTTACTACTTCCGAGTCTTGGCTTCCAATGAATATGGGATTG 878854600 243654 NM_003073.4(SMARCB1):c.*82C>T SMARCB1 Aug 22, 2016 MedGen:C1836327,OMIM:609322 Rhabdoid tumor predisposition syndrome 1 germline 22 23834262 CTCTCCTCCATCTTCTGGCAAGGACAGAGGCGAGGGGACAGCCCAGCGCCATCCTGAGGAT 121434341 237524 NM_017780.3(CHD7):c.6955C>T (p.Arg2319Cys) CHD7 Mar 17, 2016 MedGen:C0265354,OMIM:214800,Orphanet:ORPHA138,SNOMED CT:47535005 CHARGE association de novo 8 60855993 TTCTCCCTCCAGGATAGAGTAATGATAAACCGCTTAGACAACATCTGTGAAGCAGTGTTGA 137852263 25656 NM_000133.3(F9):c.1217C>T (p.Ser406Leu) F9 Oct 09, 2017 MedGen:C0008533,OMIM:306900,Orphanet:ORPHA98879,SNOMED CT:41788008 Hereditary factor IX deficiency disease germline X 139561902 GTGCTGGCTTCCATGAAGGAGGTAGAGATTCATGTCAAGGAGATAGTGGGGGACCCCATGT 139310551 181577 NM_001429.3(EP300):c.4933C>T (p.Arg1645Ter) EP300 Mar 09, 2015 MedGen:C3150941,OMIM:613684,Orphanet:ORPHA353284 Rubinstein-Taybi syndrome 2 germline 22 41176400 AGGGACAAGCACCTGGAGTTCTCTTCACTCCGAAGAGCCCAGTGGTCCACCATGTGCATGC 372127610 59373 NM_001261406.1(MPDZ):c.628C>T (p.Gln210Ter) MPDZ Jan 01, 2013 MedGen:C3554691,OMIM:615219 Hydrocephalus, nonsyndromic, autosomal recessive 2 germline 9 13222352 ATTACACATCAGCAGGCTATCAGCATCCTGCAGAAAGCCAAAGATACTGTCCAGCTAGTTA 781631629 445918 NM_021628.2(ALOXE3):c.1630C>T (p.Gln544Ter) ALOXE3 Sep 20, 2017 MedGen:CN517202 not provided germline 17 8108522 GACGCATCTGTGCAGCAGGATTCGGAGCTGCAGGCCTGGACTGGCGAGATTTTTGCTCAGG 72558420 103169 NM_000531.5(OTC):c.640C>T (p.His214Tyr) OTC - MedGen:CN517202 not provided unknown X 38403717 ATCATGATGAGCGCAGCGAAATTCGGAATGCACCTTCAGGCAGCTACTCCAAAGGTAGGGA -1 462482 NM_003482.3(KMT2D):c.12985C>T (p.Gln4329Ter) KMT2D Mar 21, 2017 MedGen:C0796004,Orphanet:ORPHA2322,SNOMED CT:313426007 Kabuki syndrome germline 12 49031720 AGACCTTCACAATTACCTTCCCCCAGCTCCCAGCTTCCCACTGAGGCCCAGCTCCCTCCCA 397514765 75614 NM_000374.4(UROD):c.346C>T (p.Gln116Ter) UROD Apr 01, 2009 MedGen:C0162566,Orphanet:ORPHA101330,SNOMED CT:61860000 Porphyria cutanea tarda germline 1 45013663 CCCAGCTTCCCAGAGCCATTAAGAGAAGAGCAGGACCTAGAACGCCTACGGGATCCAGAAG 67333670 103215 NM_000531.5(OTC):c.785C>T (p.Thr262Ile) OTC - MedGen:CN517202 not provided unknown X 38408943 AAGCAGCGCATGGAGGCAATGTATTAATTACAGACACTTGGATAAGCATGGGACAAGAAGA 766351395 444715 NM_000051.3(ATM):c.7865C>T (p.Ala2622Val) ATM Sep 06, 2017 MedGen:CN517202 not provided germline 11 108332838 GGAGACCTCAGATGGTCAGAAGTGTTGAGGCACTTTGTGATGCTTATATTATATTAGCAAA 1057519435 362137 NM_001164342.2(ZBTB20):c.1786C>T (p.His596Tyr) ZBTB20 - MedGen:C0796121,OMIM:259050,Orphanet:ORPHA3042 Primrose syndrome de novo 3 114350292 ACTTTCACCGCCAAACAGAACTACGTCAAGCACATGTTCGTACACACAGGTGAGTGTCACC 541717028 431641 NM_006343.2(MERTK):c.2164C>T (p.Arg722Ter) MERTK Jan 01, 2015 Human Phenotype Ontology:HP:0000547,MeSH:D012174,MedGen:C0035334,OMIM:268000,Orphanet:ORPHA791,SNOMED CT:28835009 Retinitis pigmentosa unknown 2 112019497 GAGTATCTGAGCAACAGGAATTTTCTTCATCGAGATTTAGCTGCTCGAAACTGCATGTAAG 1060500931 400786 NM_000548.4(TSC2):c.1474C>T (p.Gln492Ter) TSC2 May 20, 2016 MedGen:C1860707,OMIM:613254 Tuberous sclerosis 2 germline 16 2064302 GAGGAGCTGATTAACTCAGTGGTCATCTCGCAGCTCTCCCACATCCCCGAGGATAAAGACC 121917843 23143 NM_006261.4(PROP1):c.217C>T (p.Arg73Cys) PROP1 Nov 01, 2004 MedGen:C0878683,OMIM:262600 Pituitary hormone deficiency, combined 2 germline 5 177994231 AGGGGCCGCCCGCACTCCCGGCGCCGCCACCGCACCACCTTCAGCCCAGTGCAGTTGGAAC 869312697 225865 NM_020732.3(ARID1B):c.6100C>T (p.Gln2034Ter) ARID1B Sep 04, 2015 MedGen:CN029606,OMIM:135900 Coffin-Siris syndrome 1 de novo 6 157207241 ACGTTGGTCACGTTGGCCAACATTTCCGGGCAGCTAGACTTGTCTGCTTACACGGAAAGCA -1 428558 NM_020732.3(ARID1B):c.1483C>T (p.Gln495Ter) ARID1B Jun 27, 2016 MedGen:C3281201,OMIM:614562 Mental retardation, autosomal dominant 12 germline 6 156779412 GCTGCCAGCCCGGCCTGGGCGGCCGCGCAACAAAGGAGTCACCCGGCGATGAGCCCCGGCA 869025601 224859 NM_001142864.3(PIEZO1):c.7289C>T (p.Pro2430Leu) PIEZO1 Aug 04, 2016 MedGen:C4225184,OMIM:616843 Lymphedema, hereditary, III germline 16 88715960 TGGTCATTTTCAGTGACAAGGTCAGCCCACCGAGCCTCGGCTTCCTGGCTGGCTACGGGTG 121918325 23733 NM_001122764.2(PPOX):c.502C>T (p.Arg168Cys) PPOX Jul 01, 1996 MedGen:C0162532,OMIM:176200,Orphanet:ORPHA79473,SNOMED CT:58275005 Variegate porphyria germline 1 161168462 GTGGCGTCTCTAGCCATGGACAGTCTCTGCCGTGGAGTGTTTGCAGGCAACAGCCGTGAGC 121909083 22346 NM_004560.3(ROR2):c.1504C>T (p.Gln502Ter) ROR2 Aug 01, 2000 MedGen:C1849334,OMIM:268310,Orphanet:ORPHA1507 Robinow syndrome, autosomal recessive germline 9 91724990 CTGTTCGGCCCTGCCCCGGGGGAGCAGACCCAGGCTGTGGCCATCAAAACGCTGAAGGACA 368452607 199141 NM_001256850.1(TTN):c.58102C>T (p.Arg19368Ter) TTN Oct 16, 2014 EFO:EFO_0000407,Human Phenotype Ontology:HP:0001644,MedGen:C0007193,Orphanet:ORPHA217604,SNOMED CT:195021004;MedGen:CN517202 Primary dilated cardiomyopathy;not provided germline 2 178588700 TTTTTGGAGAAAAAGGAAAAGCATTCAACACGATGGGTCCCTGTCAACAAGAGTGCAATCC 747604569 185305 NM_032043.2(BRIP1):c.484C>T (p.Arg162Ter) BRIP1 Oct 26, 2017 MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Familial cancer of breast;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline 17 61849152 GATGATTTTCAAGTAGAGAAGAAAAGAATTCGACCCTTAGAAACTACACAGCAGGTAAACA 397516874 53911 NM_004004.5(GJB2):c.370C>T (p.Gln124Ter) GJB2 Mar 27, 2014 MedGen:C2673759,OMIM:220290;MedGen:CN043648,Orphanet:ORPHA87884 Deafness, autosomal recessive 1A;Nonsyndromic hearing loss and deafness germline;unknown 13 20189212 GAATTTAAGGACATCGAGGAGATCAAAACCCAGAAGGTCCGCATCGAAGGCTCCCTGTGGT 121908168 19684 NM_006492.2(ALX3):c.547C>T (p.Arg183Trp) ALX3 May 01, 2009 MedGen:C1876203,OMIM:136760 Frontonasal dysplasia 1 germline 1 110064634 CAGAAAACCCACTATCCTGATGTGTATGCCCGGGAGCAGCTGGCCCTGCGCACAGACCTGA -1 467482 NM_000267.3(NF1):c.2953C>T (p.Gln985Ter) NF1 Apr 24, 2017 MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003 Neurofibromatosis, type 1 germline 17 31229937 CATACTGAAGGCAGCTCTGAACATCTAGGGCAAGCTAGCATTGAAACAATGATGTTAAATC 397514730 75248 NM_000032.4(ALAS2):c.1642C>T (p.Gln548Ter) ALAS2 Apr 01, 2013 MedGen:C2677889,OMIM:300752,Orphanet:ORPHA443197 Protoporphyria, erythropoietic, X-linked germline X 55009302 CTGGCTTGGACTGCGGTGGGGCTGCCCCTCCAGGATGTGTCTGTGGCTGCCTGCAATTTCT 113993948 25530 NM_000202.7(IDS):c.1122C>T (p.Gly374=) IDS Nov 28, 2016 MedGen:C0026705,OMIM:309900,SNOMED CT:70737009 Mucopolysaccharidosis, MPS-II germline;maternal X 149486983 TGGAAGGACGGCTTCACTTCCGGAGGCAGGCGAGAAGCTTTTCCCTTACCTCGACCCTTTT 397516435 52758 NM_000546.5(TP53):c.586C>T (p.Arg196Ter) TP53 Jul 11, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0085390,Orphanet:ORPHA524,SNOMED CT:428850001;MedGen:CN517202;MedGen:CN169374 Hereditary cancer-predisposing syndrome;Li-Fraumeni syndrome;not provided;not specified germline 17 7674945 TTAGGTCTGGCCCCTCCTCAGCATCTTATCCGAGTGGAAGGAAATTTGCGTGTGGAGTATT 1131692309 424520 NM_000280.4(PAX6):c.661C>T (p.Gln221Ter) PAX6 - MedGen:C0344542,OMIM:106210 Aniridia 1 de novo 11 31794651 CAAAGAAATAGAACATCCTTTACCCAAGAGCAAATTGAGGCCCTGGAGAAAGGTGATAGAG 145873635 44215 NM_004315.5(ASAH1):c.173C>T (p.Thr58Met) ASAH1 Jul 30, 2015 MedGen:C1834569,OMIM:159950,Orphanet:ORPHA2590 Jankovic Rivera syndrome germline 8 18075541 GAAAATCAACCTATCCTCCTTCAGGACCAACGTGAGTAAACATCAGATGATCAAAACTCCC 121434536 32857 NM_031226.2(CYP19A1):c.1123C>T (p.Arg375Cys) CYP19A1 Aug 27, 1998 MedGen:C0878680,OMIM:613546,Orphanet:ORPHA91 Aromatase deficiency germline 15 51212460 CGGTACCAGCCTGTCGTGGACTTGGTCATGCGCAAAGCCTTAGAAGATGATGTAATCGATG 397515600 76709 NM_194248.2(OTOF):c.4157C>T (p.Thr1386Ile) OTOF Apr 26, 2011 MedGen:C1832828,OMIM:601071 Deafness, autosomal recessive 9 not provided 2 26467435 GGGCTGCCAAAGAGGAGAAGAAGAAGAAAACTCAGAGCTCTGGCTCTGGCCAGGGGTCCGA 121912742 32800 NM_000342.3(SLC4A1):c.988C>T (p.Gln330Ter) SLC4A1 Jan 15, 1996 MedGen:C2675212,OMIM:612653 Spherocytosis type 4 germline 17 44258512 GTGCTGCCTCCCACCGATGCCCCCTCCGAGCAGGCACTGCTCAGTCTGGTGCCTGTGCAGA 121434233 18447 NM_021628.2(ALOXE3):c.700C>T (p.Arg234Ter) ALOXE3 Jun 13, 2017 Gene:140560,MedGen:C1847849,OMIM:606545;MedGen:CN517202 Autosomal recessive congenital ichthyosis 3;not provided germline 17 8112177 TCTCCCATCAGGTCCTTGGGAATGAAGCTTCGAGGGCTGTTGGATCGCAAGGGCTCCTGGA 587776942 48504 NM_020964.2(EPG5):c.6232C>T (p.Arg2078Ter) EPG5 Feb 23, 2015 MedGen:C1855772,OMIM:242840,Orphanet:ORPHA1493 Absent corpus callosum cataract immunodeficiency germline 18 45867742 TGATTTTAATTCATTTTCTTTTAGGTGGAACGAGGAAGCCCCAAGAGCTGTTTCTTATTTT 199473450 67710 NM_000218.2(KCNQ1):c.409C>T (p.Leu137Phe) KCNQ1 Aug 19, 2014 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MedGen:CN517202 Congenital long QT syndrome;not provided germline 11 2527950 TCTTGCAGCTTCCTCATCGTCCTGGTCTGCCTCATCTTCAGCGTGCTGTCCACCATCGAGC 750329103 421322 NM_000079.3(CHRNA1):c.175C>T (p.Gln59Ter) CHRNA1 Apr 24, 2017 MedGen:CN517202 not provided germline 2 174759502 GTGGAGGTCACCGTGGGCCTGCAGCTGATACAGCTCATCAATGTGGTGAGACAAGAGCACT 74315330 22987 NM_000261.1(MYOC):c.1109C>T (p.Pro370Leu) MYOC Apr 07, 2016 MedGen:C1842028,OMIM:137750;MedGen:CN517202 Primary open angle glaucoma juvenile onset 1;not provided germline 1 171636331 TCCCTGGAGCTGGCTACCACGGACAGTTCCCGTATTCTTGGGGTGGCTACACGGACATTGA 121913567 29377 NM_005912.2(MC4R):c.656C>T (p.Ala219Val) MC4R Jan 01, 2005 MedGen:C0028754,OMIM:601665,Orphanet:ORPHA71529,SNOMED CT:414916001 Obesity germline 18 60371694 CTTCTCTCTATGTCCACATGTTCCTGATGGCCAGGCTTCACATTAAGAGGATTGCTGTCCT 115596308 39737 NM_005767.5(LPAR6):c.587C>T (p.Pro196Leu) LPAR6 Mar 01, 2011 MedGen:C1848435,OMIM:278150 Hypotrichosis 8 germline 13 48411837 TTTTCATCGAAATAGTGGGATTTTTTATTCCTCTAATTTTAAATGTAACTTGTTCTAGTAT 61753230 485898 NM_000287.3(PEX6):c.2578C>T (p.Arg860Trp) PEX6 Feb 20, 2018 MedGen:C3553937,OMIM:614863 Peroxisome biogenesis disorder 4B germline 6 42965262 AGACCAGATCTCCTGGACCCTGCCCTTCTGCGGCCTGGCAGGTGGGCCCCTTGTACTGCTC 886041338 264038 NM_014795.3(ZEB2):c.1102C>T (p.Gln368Ter) ZEB2 Jun 20, 2016 MedGen:C1856113,OMIM:235730,Orphanet:ORPHA2152;MedGen:CN517202 Mowat-Wilson syndrome;not provided germline 2 144400085 TCTTCTTCTCCTACTAATTCAGCCATTACCCAGTTAAGAAACAAGTTGGAGAATGGAAAAC 1060499801 389242 NM_000260.3(MYO7A):c.6196C>T (p.Gln2066Ter) MYO7A Jun 04, 2016 MedGen:C1838701,OMIM:600060 Deafness, autosomal recessive 2 germline 11 77211296 ATCCCCAAGCTGCTGCGGGAGCTGGTGCCCCAGGACCTTATCCGGCAGGTCTCACCTGATG 111033686 36508 NM_000155.3(GALT):c.413C>T (p.Thr138Met) GALT Sep 10, 2015 MedGen:C0268151,OMIM:230400,Orphanet:ORPHA79239,SNOMED CT:124354006 Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase unknown 9 34647867 TCATGTGCTTCCACCCCTGGTCGGATGTAACGCTGCCACTCATGTCGGTCCCTGAGATCCG 1057518807 361014 NM_001042492.2(NF1):c.6904C>T (p.Gln2302Ter) NF1 Feb 09, 2017 Human Phenotype Ontology:HP:0007565,MedGen:C1861975,OMIM:114030,Orphanet:ORPHA2678;MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003;Human Phenotype Ontology:HP:0100698,MedGen:C1827970 Cafe au lait spots, multiple;Neurofibromatosis, type 1;Subcutaneous neurofibromas germline;unknown 17 31338788 GAAGCTACAGTAATAGCACTAACCAAATTACAGCCACTTCTTAATAAGGTAATTACTGTAT 119103255 17346 NM_005609.3(PYGM):c.1726C>T (p.Arg576Ter) PYGM Nov 17, 2017 MedGen:C0017924,OMIM:232600,Orphanet:ORPHA368,SNOMED CT:55912009;MedGen:CN517202 Glycogen storage disease, type V;not provided germline;unknown 11 64751966 ATCCAGGTGAAGCGGATTCACGAATATAAACGACAGCTCCTCAACTGCCTCCATGTCATCA 28939701 21610 NM_001171.5(ABCC6):c.3412C>T (p.Arg1138Trp) ABCC6 Jan 09, 2017 MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005;MedGen:CN517202 Pseudoxanthoma elasticum;not provided germline 16 16163087 GCTGAGACGTTCCAGGGCAGCACAGTGGTCCGGGCATTCCGAACCCAGGCCCCCTTTGTGG 794728083 197972 NM_001943.4(DSG2):c.769C>T (p.Gln257Ter) DSG2 May 28, 2014 MedGen:CN517202 not provided germline 18 31524526 GAAGTTACAGACAAACCTGTAAAACAAGCTCAAGTTCAGATTCGTATTTTGGATGTCAATG 372827156 54183 NM_004572.3(PKP2):c.1237C>T (p.Arg413Ter) PKP2 Jul 27, 2017 MedGen:C0349788,Orphanet:ORPHA247,SNOMED CT:253528005,SNOMED CT:281170005;MedGen:C1836906,OMIM:609040;MedGen:CN221565;MedGen:CN517202 Arrhythmogenic right ventricular cardiomyopathy;Arrhythmogenic right ventricular cardiomyopathy, type 9;Arrhythmogenic right ventricular dysplasia/cardiomyopathy;not provided germline 12 32850907 CTCCTAAAAGTTCAGAATGAAGACGTTCAGCGAGCTGTGTGTGGGGCCTTGAGAAACTTAG 886038975 258822 NM_000138.4(FBN1):c.7792C>T (p.Gln2598Ter) FBN1 Mar 02, 2015 MedGen:CN118826,Orphanet:ORPHA91387 Thoracic aortic aneurysm and aortic dissection germline 15 48420714 TACAGGTGCAGCTGCCCCCAGGGCTACCTCCAGCACTACCAGTGGAACCAGTGTGTTGGCA 797045272 207365 NM_020732.3(ARID1B):c.2248C>T (p.Arg750Ter) ARID1B Oct 02, 2017 MedGen:C3281201,OMIM:614562;MedGen:CN517202 Mental retardation, autosomal dominant 12;not provided germline 6 157084872 GTTGGCTCTCCTGTAGGAAGCAACCAGTCTCGATCTGGCCCAATCTCTCCTGCAAGTATCC 104894460 29035 NM_000270.3(PNP):c.172C>T (p.Arg58Ter) PNP Jun 01, 2001 MedGen:C0268125,OMIM:613179,Orphanet:ORPHA760,SNOMED CT:60743005 Purine-nucleoside phosphorylase deficiency germline 14 20472468 TTTGACTACGGTGAAATCCCCAACTTTCCCCGAAGTACAGGTACTGGCAAGGGAAAGTGGG 77834169 57850 NM_000492.3(CFTR):c.349C>T (p.Arg117Cys) CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline;unknown 7 117530974 GCTTCCTATGACCCGGATAACAAGGAGGAACGCTCTATCGCGATTTATCTAGGCATAGGCT 137852998 19994 NM_023036.4(DNAI2):c.787C>T (p.Arg263Ter) DNAI2 Sep 15, 2011 MedGen:C2676235,OMIM:612444 Ciliary dyskinesia, primary, 9 germline 17 74299780 GCGGAGCTATCCACCATTGAGTCCAGCCACCGAGACCCTGTGTATGGCACCATCTGGCTGC 63750554 94933 NM_000179.2(MSH6):c.3772C>T (p.Gln1258Ter) MSH6 Sep 05, 2013 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Lynch syndrome germline 2 47806329 CACTACCATTCATTAGTAGAAGATTATTCTCAAAATGTTGCTGTGCGCCTAGGACATATGG 63750996 95031 NM_000179.2(MSH6):c.706C>T (p.Gln236Ter) MSH6 Sep 05, 2013 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Lynch syndrome germline 2 47798689 GAGAGTGAAGAGGAAGTACAGCCTAAGACACAAGGATCTAGGCGAAGTAGCCGCCAAATAA 185492864 99918 NM_001918.3(DBT):c.901C>T (p.Arg301Cys) DBT May 25, 2017 MedGen:C0024776,OMIM:248600,SNOMED CT:27718001;MedGen:CN517202 Maple syrup urine disease;not provided germline;unknown 1 100214855 CGAGAAGAATTAAAACCCATTGCATTTGCTCGTGGAATTAAACTCTCCTTTATGCCTTTCT 886039345 260328 NM_006579.2(EBP):c.439C>T (p.Arg147Cys) EBP May 11, 2015 MedGen:CN517202 not provided germline X 48527255 GTGATCGCCTTTCTCCGCCAGCATCCCCTCCGCTTCATTCTACAGCTTGTGGTCTCTGTGG 398124594 102502 NM_183050.3(BCKDHB):c.799C>T (p.Gln267Ter) BCKDHB Oct 17, 2014 MedGen:C0024776,OMIM:248600,SNOMED CT:27718001 Maple syrup urine disease germline;unknown 6 80200990 AACATCCCACTGTCCCAGGCCGAAGTCATACAGGAAGGGAGTGATGTTACTCTAGTTGCCT 17847577 20488 NM_000553.4(WRN):c.1105C>T (p.Arg369Ter) WRN Aug 10, 2017 MedGen:C0043119,OMIM:277700,Orphanet:ORPHA902,SNOMED CT:51626007 Werner syndrome germline 8 31081132 GGAGAAGATGTACTTGGAAATAAAGTGGAACGAAAAGAAGATGGATTTGAAGATGGAGTAG 750024353 266572 NM_002180.2(IGHMBP2):c.2560C>T (p.Gln854Ter) IGHMBP2 Aug 13, 2015 MedGen:C4015349,OMIM:616155,Orphanet:ORPHA443073;MedGen:C1858517,OMIM:604320,Orphanet:ORPHA98920 Charcot-Marie-Tooth disease, axonal, type 2S;Spinal muscular atrophy, distal, autosomal recessive, 1 germline 11 68937040 GCGCAGGGGCAGCCCGCCAGCAAGGAGCAGCAGGCCTCAGGGCAGCAGAAACTTCCAGAAA 111033539 27307 NM_000463.2(UGT1A1):c.991C>T (p.Gln331Ter) UGT1A1 Jul 01, 1992 MedGen:C0010324,OMIM:218800,Orphanet:ORPHA79234 Crigler Najjar syndrome, type 1 germline 2 233767160 GCAATTGCTGATGCTTTGGGCAAAATCCCTCAGACAGTAAGAAGATTCTATACCATGGCCT 267606733 21089 NM_004273.4(CHST3):c.481C>T (p.Leu161Phe) CHST3 Oct 01, 2010 MedGen:C1840471,OMIM:143095 Spondyloepiphyseal dysplasia with congenital joint dislocations germline 10 72007512 TTCTTCAACCAGCAGGGCAACATCTTCTACCTCTTCGAGCCGCTGTGGCACATCGAGCGCA 28939069 20618 NM_014112.4(TRPS1):c.2893C>T (p.Arg965Cys) TRPS1 Jan 24, 2017 MedGen:C0432233,OMIM:190350,SNOMED CT:254091006 Trichorhinophalangeal dysplasia type I germline 8 115415015 GAGCAGATTATTAGGAGGAGAACAAGAAAGCGCCTTAACCCAGAGGCACTTCAGGCTGAGC 587783019 166169 NM_020366.3(RPGRIP1):c.2356C>T (p.Gln786Ter) RPGRIP1 Sep 18, 2014 MedGen:C1854260,OMIM:613826 Leber congenital amaurosis 6 unknown 14 21325372 TCAACCGATGTGCTTGGAGGCCGGAAGGCCCAGGAAGAGGAGGTGAGAAAAAAGATGTGCC 121909258 23351 NM_000388.3(CASR):c.2383C>T (p.Arg795Trp) CASR Mar 24, 2015 MedGen:C1809471,OMIM:145980,Orphanet:ORPHA93372,SNOMED CT:190868007;MedGen:CN517202 Hypocalciuric hypercalcemia, familial, type 1;not provided germline 3 122284337 GCCATCTGCTTCTTCTTTGCCTTCAAGTCCCGGAAGCTGCCGGAGAACTTCAATGAAGCCA 587777782 166148 NM_177402.4(SYT2):c.923C>T (p.Pro308Leu) SYT2 Sep 04, 2014 MedGen:C4015038,OMIM:616040 Myasthenic syndrome, congenital, 7, presynaptic germline 1 202599348 TCTGGGGTTGGGATTCTCCCTCCGCAGACCCGTACGTGAAGATCCACCTGATGCAGAATGG 120074182 18155 NM_000218.2(KCNQ1):c.935C>T (p.Thr312Ile) KCNQ1 Jan 13, 2017 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MedGen:C0035828,OMIM:192500,Orphanet:ORPHA101016,SNOMED CT:20852007;MedGen:CN517202 Congenital long QT syndrome;Long QT syndrome 1;not provided germline 11 2583448 TGTCCCTCTCCCTGCAGGTCACAGTCACCACCATCGGCTATGGGGACAAGGTGCCCCAGAC 878853139 237496 NM_022068.3(PIEZO2):c.6662C>T (p.Thr2221Ile) PIEZO2 Jun 04, 2014 MedGen:C1862472,OMIM:108145,Orphanet:ORPHA1154 Oculomelic amyoplasia de novo 18 10696263 CCCAGAAACACTCAGCAGCTGCAGACATCACCTCTTCACTGTCAGAGGACCAGGTCCCGGG 797044527 178776 NM_023067.3(FOXL2):c.650C>T (p.Ser217Phe) FOXL2 Jul 25, 2017 MedGen:C0220663,OMIM:110100,Orphanet:ORPHA126;MedGen:CN517202 Blepharophimosis, ptosis, and epicanthus inversus;not provided germline 3 138946073 CGCAGCCTCCCTCACCCATGCCCTATGCCTCCTGCCAGATGGCGGCAGCCGCAGCGGCTGC 180177253 186658 NM_000030.2(AGXT):c.653C>T (p.Ser218Leu) AGXT Nov 27, 2014 MedGen:C0268164,OMIM:259900,Orphanet:ORPHA93598,SNOMED CT:65520001 Primary hyperoxaluria, type I germline;unknown 2 240874035 AGAAGGCCCTGAACGCCCCTCCAGGGACCTCGCTCATCTCCTTCAGTGACAAGGCCAAGTG -1 481529 NM_001006657.1(WDR35):c.3091C>T (p.His1031Tyr) WDR35 Feb 06, 2018 MedGen:C3150874,OMIM:613610 Cranioectodermal dysplasia 2 germline 2 19930459 GATAATGCATGGAGAGGGGCAGAGGCTTACCACTTCTTTATACTTGCACAGAGGCAGCTCT 141507441 214202 NM_023073.3(CPLANE1):c.8710C>T (p.Arg2904Ter) CPLANE1 Oct 25, 2017 MedGen:C3553264,OMIM:614615;MedGen:CN517202 Joubert syndrome 17;not provided germline;unknown 5 37125330 AGAGAGATTCAAGCCTGGATGAAAAGAAAACGAAAAGAAAGAATGGCAAAGTACTTAAATG 200391019 186055 NM_138694.3(PKHD1):c.4870C>T (p.Arg1624Trp) PKHD1 Jul 19, 2017 MedGen:C0085548,OMIM:263200,Orphanet:ORPHA731,SNOMED CT:28770003;MedGen:CN517202 Autosomal recessive polycystic kidney disease;not provided germline;unknown 6 52024940 CTGACGGTGAACATCGGTGCTGAGCTCATCCGGTGCATTGTTCCCACAGGGAATGGCTCTG 180177354 78974 NM_017890.4(VPS13B):c.1504C>T (p.Arg502Ter) VPS13B - MedGen:CN517202 not provided germline 8 99135674 ACATACCTTACAAATTCATTGTTTGATTACCGAAGCCCAGAAAATAATGGTACTCGCGCAG 104894188 22284 NM_033022.3(RPS24):c.316C>T (p.Gln106Ter) RPS24 Jun 25, 2009 MedGen:C1857719,OMIM:610629 Diamond-Blackfan anemia 3 germline 10 78037230 CTGTATGAGAAGAAAAAGACCTCAAGAAAGCAACGAAAGGAACGCAAGAACAGAATGAAGA 779773463 205037 NM_022406.3(XRCC4):c.481C>T (p.Arg161Ter) XRCC4 Mar 05, 2015 MedGen:C4225288,OMIM:616541 Short stature, microcephaly, and endocrine dysfunction germline 5 83195935 CTTCTGAGAGATTGGAATGATGTTCAAGGACGGTGTGTACACAGTTTGCTTGTGGTATAAA 886039392 259766 NM_002222.5(ITPR1):c.805C>T (p.Arg269Trp) ITPR1 Jun 24, 2016 MedGen:CN517202 not provided germline 3 4645678 AAGCAGCACGTCTTCCTGAGAACCACGGGCCGGCAGTCGGCCACATCTGCCACCAGTTCAA 869248137 229744 NM_004281.3(BAG3):c.925C>T (p.Arg309Ter) BAG3 May 07, 2016 MedGen:C3151293,OMIM:613881;EFO:EFO_0000407,Human Phenotype Ontology:HP:0001644,MedGen:C0007193,Orphanet:ORPHA217604,SNOMED CT:195021004;MedGen:CN517202 Dilated cardiomyopathy 1HH;Primary dilated cardiomyopathy;not provided germline 10 119676479 GTGTCCTTTTTTCAGCAGCCCATGACCCATCGAGAAACTGCACCTGTTTCCCAGCCTGAAA 113993971 22526 NM_002775.4(HTRA1):c.1108C>T (p.Arg370Ter) HTRA1 Sep 11, 2014 MedGen:C1838577,OMIM:600142,Orphanet:ORPHA199354 Cerebral autosomal recessive arteriopathy with subcortical infarcts and leukoencephalopathy germline 10 122508758 ATTAAAAAGTTCCTCACGGAGTCCCATGACCGACAGGCCAAAGGTAGGCAAGGCCCACACA 1114167462 419867 NM_000548.4(TSC2):c.1294C>T (p.Gln432Ter) TSC2 Jun 10, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 16 2062533 TCCCTCCTGAACCTGATCTCCTATAGAGCGCAGTCCATCCACCCGGCCAAGGACGGCTGGA 587779400 106587 NM_000181.3(GUSB):c.530C>T (p.Thr177Ile) GUSB - MedGen:C0085132,OMIM:253220,Orphanet:ORPHA584 Mucopolysaccharidosis type VII inherited 7 65979778 GAATCACTATCGCCATCAACAACACACTCACCCCCACCACCCTGCCACCAGGGACCATCCA 72552300 103184 NM_000531.5(OTC):c.67C>T (p.Arg23Ter) OTC - MedGen:CN517202 not provided unknown X 38352763 GCTTTTAGAAATGGTCACAACTTCATGGTTCGAAATTTTCGGTAAGTGATGGTCAGAGACT -1 442187 NM_000435.2(NOTCH3):c.160C>T (p.Arg54Cys) NOTCH3 Dec 16, 2015 MedGen:CN517202 not provided germline 19 15197537 CTGGACGGAAGCCCGTGTGCAAATGGAGGTCGTTGCACCCAGCTGCCCTCCCGGGAGGCTG 104894645 19825 NM_025237.2(SOST):c.376C>T (p.Arg126Ter) SOST Mar 01, 2001 MedGen:CN032489,OMIM:269500 Sclerosteosis 1 germline 17 43755608 CCCAACGCCATCGGCCGCGGCAAGTGGTGGCGACCTAGTGGGCCCGACTTCCGCTGCATCC 765907815 225799 NM_024769.3(CLMP):c.508C>T (p.Arg170Ter) CLMP - Human Phenotype Ontology:HP:0004389,MedGen:C0021847,OMIM:615237 Congenital short bowel syndrome inherited 11 123083728 GAGCCCATTGTGTATTACTGGCAGCGAATCCGAGAGAAAGAGGGAGAGGATGAACGTCTGC 141848292 16155 NM_025137.3(SPG11):c.5623C>T (p.Gln1875Ter) SPG11 Oct 13, 2016 MedGen:C1858479,OMIM:604360,Orphanet:ORPHA2822;MedGen:CN517202 Spastic paraplegia 11, autosomal recessive;not provided germline 15 44584057 ACATGCGAGAATAGATTGGATTGGAAAGAGCAGGAGTCACTAAACTTTTTGATTGGGCGCC 121912483 29583 NM_000228.2(LAMB3):c.496C>T (p.Gln166Ter) LAMB3 Feb 01, 1998 MedGen:C0079683,OMIM:226700,Orphanet:ORPHA79404,SNOMED CT:400140006 Junctional epidermolysis bullosa gravis of Herlitz germline 1 209634515 ACCTTCCCTCGGGTCCGCCAGGGTCGGCCTCAGAGCTGGCAGGATGTTCGGTGCCAGTCCC 886039419 259994 NM_130799.2(MEN1):c.1198C>T (p.Gln400Ter) MEN1 Aug 15, 2016 MedGen:CN517202 not provided germline 11 64805186 CCCTTCCCCCTCGTCCAGGGCACCCAGAGCCAAGGTTCCGCCCTCCAGGACCCTGAGTGCT 137852435 25284 NM_000132.3(F8):c.2149C>T (p.Arg717Trp) F8 Jan 01, 1992 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154931641 TGGATTCTGGGGTGCCACAACTCAGACTTTCGGAACAGAGGCATGACCGCCTTACTGAAGG -1 483493 NM_000179.2(MSH6):c.1876C>T (p.Gln626Ter) MSH6 Jul 31, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 2 47799859 TCTCTTCAGGAAGGTCTGATACCCGGCTCCCAGTTTTGGGATGCATCCAAAACTTTGAGAA 587779170 96648 NM_000251.2(MSH2):c.652C>T (p.Gln218Ter) MSH2 Sep 05, 2013 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Lynch syndrome germline 2 47412420 TTTAAACTATTTCTTTCAAAATAGATAATTCAAAGAGGAGGAATTCTGATCACAGAAAGAA -1 485722 NM_001252634.1(THRB):c.941C>T (p.Ser314Phe) THRB Jan 12, 2016 MedGen:C2937288,OMIM:188570 Thyroid hormone resistance, generalized, autosomal dominant germline 3 24127702 TCCTCAAAGGCTGCTGCATGGAGATCATGTCCCTTCGCGCTGCTGTGCGCTATGACCCAGA 121909744 31134 NM_000340.1(SLC2A2):c.1250C>T (p.Pro417Leu) SLC2A2 Sep 01, 1999 MedGen:C3495427,OMIM:227810,Orphanet:ORPHA2088,SNOMED CT:61598006 Fanconi-Bickel syndrome germline 3 170998317 TTGTCAGCTTCTTTGAAATTGGGCCAGGCCCGATCCCCTGGTTCATGGTGGCTGAGTTTTT 104894724 27465 NM_000363.4(TNNI3):c.433C>T (p.Arg145Trp) TNNI3 Jul 11, 2017 MedGen:C1861861,OMIM:115210;Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Familial restrictive cardiomyopathy 1;Hypertrophic cardiomyopathy;Primary familial hypertrophic cardiomyopathy;not provided germline 19 55154146 CTTCGAGGCAAGTTTAAGCGGCCCACCCTGCGGAGAGTGAGGATCTCTGCAGATGCCATGA 587779976 133109 NM_000251.2(MSH2):c.70C>T (p.Gln24Ter) MSH2 Jan 08, 2014 MedGen:CN517202 not provided germline 2 47403261 GCGGCCGAGGTCGGCTTCGTGCGCTTCTTTCAGGGCATGCCGGAGAAGCCGACCACCACAG 72664291 427060 NM_001171.5(ABCC6):c.662+12C>T ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16212173 CGTTCTGGTGGGTTTCTGGGTAAGTAAAGTCGCACGGAAGGGTTGGGGTGGTGCCTCACCC 755674457 452771 NM_005051.2(QARS):c.1387C>T (p.Arg463Ter) QARS Apr 07, 2017 MedGen:C4014239,OMIM:615760,Orphanet:ORPHA404437 Microcephaly, progressive, with seizures and cerebral and cerebellar atrophy germline 3 49099762 CACTCACTCTGCACCAAGGAATTCCAGGCCCGGTGAGGGAGCTGGGTCCATGGGGTGGTAG 1064793796 411341 NM_001193416.2(DDX3X):c.121C>T (p.Pro41Ser) DDX3X Jul 27, 2015 MedGen:CN517202 not provided germline X 41339053 TATATTTTTTTAGAAGGGCGCTATATTCCTCCTCATTTAAGGAACCGAGAAGCTACTAAAG 1131692181 424246 NM_001904.3(CTNNB1):c.1672C>T (p.Gln558Ter) CTNNB1 Aug 15, 2017 MedGen:C3554449,OMIM:615075,Orphanet:ORPHA404473 Mental retardation, autosomal dominant 19 germline 3 41234286 CAGCGCCGTACGTCCATGGGTGGGACACAGCAGCAATTTGTGGTAGGTAAATTCTTACAGT 1131691164 421079 NM_000051.3(ATM):c.4507C>T (p.Gln1503Ter) ATM Apr 16, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0027672,SNOMED CT:699346009 Ataxia-telangiectasia syndrome;Hereditary cancer-predisposing syndrome germline 11 108292689 CTTTGTTGTGACTTATTAAGTCAGGTTTGCCAGACAGCCGTGACTTACTGTAAGGATGCTC 137852588 24879 NM_000044.4(AR):c.1645C>T (p.Pro549Ser) AR Aug 01, 1996 MedGen:C2678098,OMIM:300633 Hypospadias 1, X-linked germline X 67643284 AGTTTGGAGACTGCCAGGGACCATGTTTTGCCCATTGACTATTACTTTCCACCCCAGAAGA 727503180 174745 NM_000256.3(MYBPC3):c.2920C>T (p.Gln974Ter) MYBPC3 Jul 09, 2015 MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Primary familial hypertrophic cardiomyopathy;not provided germline 11 47333996 CACTCTATACCCACAGAACGGCCACGGCTTCAGCTGCCCAGGCACCTGCGCCAGACCATTC 886039550 260075 NM_000138.4(FBN1):c.1042C>T (p.Gln348Ter) FBN1 Jun 22, 2016 MedGen:CN517202 not provided germline 15 48520764 ACAGCTCTGACAAACGGGCGCTGCTCTAACCAGCTGCCACAGTCCATAACCAAAATGCAGT 771466122 226518 NM_025207.4(FLAD1):c.1588C>T (p.Arg530Cys) FLAD1 Sep 08, 2017 MedGen:C0268596,OMIM:231680,Orphanet:ORPHA26791,SNOMED CT:22886006;MedGen:C4310822,OMIM:255100;MedGen:CN517202 Glutaric aciduria, type 2;Lipid storage myopathy due to flavin adenine dinucleotide synthetase deficiency;not provided germline;inherited 1 154992746 TGGACCTACAGAGACATCTGGGATTTTCTGCGTCAGCTGTTTGTCCCATACTGTATCCTGT 121912289 47545 NM_001363.4(DKC1):c.1226C>T (p.Pro409Leu) DKC1 May 10, 2012 MedGen:C1148551,OMIM:305000 Dyskeratosis congenita X-linked germline X 154774672 ACAAGCATGGGAAGCCCACAGACAGCACACCTGCCACCTGGAAGCAGGAGTATGTTGACTA 778544828 427090 NM_001171.5(ABCC6):c.118C>T (p.Pro40Ser) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16221750 TGCTTCCTGAGAACAGCAGGGGTCTGGGTACCCCCCATGTACCTCTGGGTCCTTGGTCCCA -1 480725 NM_005199.4(CHRNG):c.1210C>T (p.Gln404Ter) CHRNG Dec 20, 2017 MedGen:C1854678,OMIM:253290,Orphanet:ORPHA33108,SNOMED CT:60192008 Lethal multiple pterygium syndrome uniparental 2 232544541 CCTCGCAGTGAACTCCTCTTCCAGCAGTGGCAGCGGCAAGGGCTGGTGGCGGCAGCGCTGG 121918046 28538 NM_002693.2(POLG):c.1879C>T (p.Arg627Trp) POLG Feb 01, 2003 MedGen:C1843851,OMIM:607459,Orphanet:ORPHA70595 Sensory ataxic neuropathy, dysarthria, and ophthalmoparesis germline 15 89325520 CGTCATGGCTGGGGCTACTTGGTGCCTGGGCGGCGGGACAACCTGGCCAAGCTGCCGACAG 80356593 21176 NM_194248.2(OTOF):c.2485C>T (p.Gln829Ter) OTOF Jun 29, 2016 MedGen:C1832828,OMIM:601071;MedGen:CN043648,Orphanet:ORPHA87884;MedGen:CN517202 Deafness, autosomal recessive 9;Nonsyndromic hearing loss and deafness;not provided germline 2 26477210 CACACGGTGCGGGACAAGCTGAGGCTGTGCCAGAACTTCCTGCAGAAGCTGCGCTTCCTGG 886041324 264058 NM_001204.6(BMPR2):c.637C>T (p.Arg213Ter) BMPR2 Jun 07, 2016 MedGen:C0152171,OMIM:178600,SNOMED CT:26174007;MedGen:CN517202 Primary pulmonary hypertension;not provided germline 2 202518837 TTAAAACACTTGCAGCTGATTGGCCGAGGTCGATATGGAGCAGTATATAAAGGCTCCTTGG 45448101 58502 NM_000548.4(TSC2):c.4993C>T (p.Gln1665Ter) TSC2 Jul 08, 2016 MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000;MedGen:CN517202 Tuberous sclerosis syndrome;not provided germline 16 2087866 GGATGACCCTTTCTCTTGTCCGGGCAGGGCCAGTTCAACTTTGTCCACGTGATCGTCACCC 199473373 78464 NM_000891.2(KCNJ2):c.244C>T (p.Arg82Trp) KCNJ2 Jan 21, 2017 MedGen:C1563715,OMIM:170390,Orphanet:ORPHA37553,SNOMED CT:422348008;EFO:EFO_0005306,Human Phenotype Ontology:HP:0004756,MedGen:C2108113,SNOMED CT:25569003 Andersen Tawil syndrome;Ventricular tachycardia germline 17 70175283 ATCTTCACCACGTGTGTGGACATTCGCTGGCGGTGGATGCTGGTTATCTTCTGCCTGGCTT 398124500 102333 NM_138694.3(PKHD1):c.8824C>T (p.Arg2942Ter) PKHD1 Jan 16, 2015 MedGen:C0085548,OMIM:263200,Orphanet:ORPHA731,SNOMED CT:28770003 Autosomal recessive polycystic kidney disease germline;unknown 6 51753327 CCAGGAAGTGTACATGTCACGGAGGATGGCCGACACATTCGTTTGGCTGCTGAGGTTGGAC 80338860 21826 NM_001360.2(DHCR7):c.1054C>T (p.Arg352Trp) DHCR7 Sep 14, 2016 MedGen:C0175694,OMIM:270400,Orphanet:ORPHA818,SNOMED CT:43929004;MedGen:CN517202 Smith-Lemli-Opitz syndrome;not provided germline;unknown 11 71435749 CTGCTGGGCCTGGTGGGCTACTACATCTTCCGGGTGGCCAACCACCAGAAGGACCTGTTCC 104894133 16035 NM_000380.3(XPA):c.619C>T (p.Arg207Ter) XPA Mar 01, 1992 MedGen:C0268135,OMIM:278700 Xeroderma pigmentosum, type 1 germline 9 97684977 CAAGAAGCATTAGAAGAAGCAAAGGAAGTCCGACAGGAAAACCGAGAAAAAATGAAACAGA -1 487964 NM_000411.7(HLCS):c.1135C>T (p.Gln379Ter) HLCS May 04, 2017 MedGen:C0268581,OMIM:253270,Orphanet:ORPHA79242 Holocarboxylase synthetase deficiency germline 21 36930295 ACAACCCTTGGCCTCAGCTGTGACATGAAACAAGTTCCTGCCTTAACTCCTCTTTACTTGC 757188030 227443 NM_001129820.1(SLFN14):c.667C>T (p.Arg223Trp) SLFN14 Apr 22, 2016 MedGen:C4310797,OMIM:616913,Orphanet:ORPHA466806 Platelet-type bleeding disorder 20 germline 17 35557396 AAAAGGTTCACCACCAAAAAAGTCATACCTCGGATTAAGGAAATGCTGCCTCATTATGTTT 137852345 25449 NM_000402.4(G6PD):c.1172C>T (p.Ala391Val) G6PD May 24, 2017 MedGen:C4017590;na Anemia, nonspeherocytic hemolytic, due to g6pd deficiency;G6PD SERRES germline X 154532772 GGGTGCCCTTCATCCTGCGCTGCGGCAAGGCCCTGAACGAGCGCAAGGCCGAGGTGAGGCT 137853047 22113 NM_006009.3(TUBA1A):c.1256C>T (p.Ser419Leu) TUBA1A Sep 15, 2010 MedGen:C1969029,OMIM:611603,Orphanet:ORPHA102011 Lissencephaly 3 germline 12 49185110 TTGGGGAGGGGATGGAGGAAGGTGAGTTTTCAGAGGCCCGTGAGGACATGGCTGCCCTTGA 104894706 19830 NM_181882.2(PRX):c.586C>T (p.Arg196Ter) PRX Feb 15, 2001 MedGen:C3540453,OMIM:614895,Orphanet:ORPHA99952;MedGen:C0011195,OMIM:145900,Orphanet:ORPHA64748,SNOMED CT:111499002 Charcot-Marie-Tooth disease, demyelinating, type 4f;Dejerine-Sottas disease germline 19 40397766 CGGCGCCTCCAGCTGCCTCGGCTGCGTGTACGAGAAGTGGCCGAAGAGGCTCAGGCAGCCC 878853718 238917 NM_000179.2(MSH6):c.2680C>T (p.Gln894Ter) MSH6 Sep 06, 2016 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Lynch syndrome germline 2 47800663 TCTAAAATCCTTAAGCAGGTCATCTCTCTGCAGACAAAAAATCCTGAAGGTCGTTTTCCTG 137852311 25524 NM_000032.4(ALAS2):c.1354C>T (p.Arg452Cys) ALAS2 Aug 30, 2016 MedGen:C0221018,OMIM:300751,Orphanet:ORPHA98362,SNOMED CT:62677000;MedGen:CN517202 Hereditary sideroblastic anemia;not provided germline X 55014830 GAGGGCCAAGCCCTGAGGCGAGCCCACCAGCGCAATGTCAAGCACATGCGCCAGCTACTCA 121907931 18473 NM_024105.3(ALG12):c.200C>T (p.Thr67Met) ALG12 Sep 15, 2002 MedGen:C2931001,OMIM:607143,Orphanet:ORPHA79324,SNOMED CT:711155008 ALG12-congenital disorder of glycosylation germline 22 49913480 ATCTTGAGTTCCCCGGAGTCGTCCCCAGGACGTTCCTCGGGCCAGTGGTGATCGCAGTGTT 75949023 39947 NM_144612.6(LOXHD1):c.4714C>T (p.Arg1572Ter) LOXHD1 Feb 16, 2016 MedGen:C2746083,OMIM:613079;MedGen:C2746083,OMIM:613079;MedGen:CN043648,Orphanet:ORPHA87884 Deafness, autosomal recessive 77;Deafness, autosomal recessive 77;Nonsyndromic hearing loss and deafness germline 18 46524734 CGCTGGCTCTCCCTGAAGAAGGAGGATGGGCGACTCGAGAGGCTCTTTTACGAGAAGGTGA 121434325 16756 NM_000082.3(ERCC8):c.479C>T (p.Ala160Val) ERCC8 Aug 29, 2016 MedGen:C0751039,OMIM:216400,Orphanet:ORPHA90321;MedGen:CN517202 Cockayne syndrome type A;not provided germline 5 60904794 CTCCAGTCTCCACCAAGCACTGTTTGGTAGCAGGTTTGTAAGTGTATTCTTTTGTCTTTTG 121908180 19622 NM_031885.3(BBS2):c.646C>T (p.Arg216Ter) BBS2 Sep 21, 2001 MedGen:C4016908 Bardet-biedl syndrome 2/6, digenic germline 16 56506191 GTCACCTCTCTTTGTCCCATGTATGGCAGTCGATTTGGTTATGCCCTTTCCAATGGCACAG 28942093 18455 NM_006147.3(IRF6):c.5C>T (p.Ala2Val) IRF6 Oct 01, 2003 MedGen:C0175697,OMIM:119300,SNOMED CT:79261008 Van der Woude syndrome germline 1 209801409 ATTTCTCCCTCTGACCCCCCCAGATCATGGCCCTCCACCCCCGCAGAGTCCGGCTAAAGCC 200105202 211239 NM_020745.3(AARS2):c.595C>T (p.Arg199Cys) AARS2 Jul 12, 2017 MedGen:CN517202 not provided germline 6 44311148 CCTGCTTTTCTCCCCAGGGTGCCTGCTAGCCGTGTGCTTTCCTTTGGACCACAAGAGAACT 137852657 34383 NM_015915.4(ATL1):c.467C>T (p.Thr156Ile) ATL1 Sep 21, 2010 MedGen:C2931355,OMIM:182600,Orphanet:ORPHA100984 Spastic paraplegia 3 not provided 14 50591584 ATACTCAGGGAACCTTTGATAGTCAGTCAACTTTGAGAGATTCAGCCACAGTATTTGCCCT 759213174 264398 NM_015046.5(SETX):c.4816C>T (p.Arg1606Ter) SETX Mar 09, 2016 MedGen:CN517202 not provided germline 9 132326782 ACTAAGATTTTTAGCTCAAAGAGTACTTCACGAATTGCTGGTCTTTCTAAATCTTTGGAAA 1060499805 389220 NM_004802.3(OTOF):c.1729C>T (p.Arg577Ter) OTOF Jun 04, 2016 MedGen:C1832828,OMIM:601071 Deafness, autosomal recessive 9 germline 2 26468468 CCTTTTCATCTCATCTTTTGGCAGCAACTTCGACAACAAGAGCCCTCTGGAATTGACTTGG 869312755 226343 NM_000051.3(ATM):c.4735C>T (p.Gln1579Ter) ATM Oct 31, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Ataxia-telangiectasia syndrome;Hereditary cancer-predisposing syndrome;not provided germline;unknown 11 108293436 GTTGTTTTTAAGGATTTGCGTATTACTCAGCAAAAAATCAAATACAGTAGAGGACCCTTTT 1057516281 357938 NM_000352.4(ABCC8):c.3748C>T (p.Arg1250Ter) ABCC8 Dec 11, 2015 MedGen:C1257959,OMIM:256450,SNOMED CT:360339005 Persistent hyperinsulinemic hypoglycemia of infancy unknown 11 17398344 CTCACAGCTGCCAACAGATGGCTGGAAGTCCGAATGGCAAGTGCTATTCCCCTCTACCCTG 794729675 199880 NM_000165.4(GJA1):c.131C>T (p.Ala44Val) GJA1 Jun 01, 2015 MedGen:CN258421,OMIM:617525 Erythrokeratodermia variabilis et progressiva 3 germline 6 121446978 TCCTGCTGCTGGGGACAGCGGTTGAGTCAGCCTGGGGAGATGAGCAGTCTGCCTTTCGTTG 80338843 21932 NM_003002.3(SDHD):c.112C>T (p.Arg38Ter) SDHD Aug 30, 2017 MedGen:C1708353,Orphanet:ORPHA29072;MedGen:C0027672,SNOMED CT:699346009;MedGen:C1847319,OMIM:606864,Orphanet:ORPHA97286;MedGen:C1868633,OMIM:168000;MedGen:C1868633,OMIM:168000;Human Phenotype Ontology:HP:0002666,MedGen:C0031511,OMIM:171300;Human Phenotype Ontology:HP:0002666,MedGen:C0031511,OMIM:171300;MedGen:CN517202 Hereditary Paraganglioma-Pheochromocytoma Syndromes;Hereditary cancer-predisposing syndrome;Paraganglioma and gastric stromal sarcoma;Paragangliomas 1;Paragangliomas 1;Pheochromocytoma;Pheochromocytoma;not provided germline 11 112087916 CCTGCTCATATCTCAGCATTTCTTCAGGACCGACCTATCCCAGAATGGTGTGGAGTGCAGC 775827529 474395 NM_004168.3(SDHA):c.553C>T (p.Gln185Ter) SDHA Mar 29, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 5 225979 GGACAGAGCCTCAAGTTTGGAAAGGGCGGGCAGGCCCATCGGTGCTGCTGTGTGGCTGATC 587783882 168337 NM_133433.3(NIPBL):c.1183C>T (p.Gln395Ter) NIPBL Jul 10, 2013 MedGen:CN029798,OMIM:122470 Cornelia de Lange syndrome 1 germline 5 36976090 GTTTCAGAAAATGATATTCCTTTTAATGTGCAGTACCCAGGACAGACTTCAAAAACACCCA 786201856 182336 NM_000038.5(APC):c.847C>T (p.Arg283Ter) APC Mar 09, 2017 MedGen:CN240755;MedGen:C2713442,OMIM:175100;MedGen:C0027672,SNOMED CT:699346009;MedGen:C0346629;MedGen:CN517202 Familial adenomatous polyposis;Familial adenomatous polyposis 1;Hereditary cancer-predisposing syndrome;Malignant Colorectal Neoplasm;not provided germline;somatic;unknown 5 112815507 AATGTGCTTAATTTTTAGGGTTCAACTACACGAATGGACCATGAAACAGCCAGTGTTTTGA 869312751 226244 NM_006493.2(CLN5):c.694C>T (p.Gln232Ter) CLN5 Oct 20, 2016 MedGen:C1850442,OMIM:256731,Orphanet:ORPHA228360 Ceroid lipofuscinosis neuronal 5 germline 13 76996109 GTTCACTGGAAGGAAAATGGGACATTAGTTCAAGTAGCAACTATATCAGGTAAGTTGTGAA 121912582 23571 NM_004442.7(EPHB2):c.2167C>T (p.Gln723Ter) EPHB2 Aug 01, 2014 MedGen:C1863600,OMIM:603688 Prostate cancer/brain cancer susceptibility somatic 1 22907980 AAGCAAAACGATGGGCAGTTCACAGTCATCCAGCTGGTGGGCATGCTTCGGGGCATCGCAG 121918260 16915 NM_020376.3(PNPLA2):c.865C>T (p.Gln289Ter) PNPLA2 Jan 01, 2007 MedGen:C1853136,OMIM:610717,Orphanet:ORPHA98908 Neutral lipid storage disease with myopathy germline 11 823801 GTGGAGAGCGCCCAAGCGGAGGATTACTCGCAGCTGCCCGGAGAAGATCACATCCTGGAGC 397514701 65569 NM_032208.2(ANTXR1):c.262C>T (p.Arg88Ter) ANTXR1 May 02, 2013 MedGen:C0406723,OMIM:230740,Orphanet:ORPHA2067,SNOMED CT:239028001 Odontotrichomelic syndrome germline 2 69044779 TTGAGAATGTCCTTTATTGTTTTCTCCACCCGAGGAACAACCTTAATGAAACTGACAGAAG 781261060 362376 NM_032578.3(MYPN):c.1129C>T (p.Arg377Ter) MYPN Feb 08, 2017 MedGen:CN240509,OMIM:617336 Nemaline myopathy 11, autosomal recessive germline 10 68145525 GAAGGCGACCCTAACAAGGAAGAGATGAATCGGTAATTCTGATTTTCTGTCTTATAGCTTT 387907599 71505 NM_006563.4(KLF1):c.1012C>T (p.Pro338Ser) KLF1 - MedGen:C1292231,OMIM:111150;MedGen:C3150926,OMIM:613673,Orphanet:ORPHA293825;MedGen:C3150805,OMIM:613566 BLOOD GROUP--LUTHERAN INHIBITOR;Congenital dyserythropoietic anemia, type IV;Fetal hemoglobin quantitative trait locus 6 not provided 19 12884962 CGCCACTACCGGAAACACACGGGGCAGCGCCCCTTCCGCTGCCAGCTCTGCCCACGTGCTT 6445 27198 NM_000500.7(CYP21A2):c.1360C>T (p.Pro454Ser) CYP21A2 Jul 18, 2016 MedGen:C0852654,OMIM:201910 21-hydroxylase deficiency germline 6 32041006 ACCCGACTGCTGCAGGCCTTCACGCTGCTGCCCTCCGGGGACGCCCTGCCCTCCCTGCAGC 28933677 25323 NM_000132.3(F8):c.5558C>T (p.Ala1853Val) F8 Dec 01, 1993 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154904839 CACCCACTAAAGATGAGTTTGACTGCAAAGCCTGGGCTTATTTCTCTGATGTTGACCTGGT 80356969 70213 NM_007294.3(BRCA1):c.5353C>T (p.Gln1785Ter) BRCA1 Mar 27, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline 17 43049174 TCCATTTTAGATCAACTGGAATGGATGGTACAGCTGTGTGGTGCTTCTGTGGTGAAGGAGC 121434517 19106 NM_015474.3(SAMHD1):c.433C>T (p.Arg145Ter) SAMHD1 Mar 13, 2014 MedGen:C2749659,OMIM:612952 Aicardi Goutieres syndrome 5 germline 20 36935105 ATCATTGATACACCTCAATTTCAACGTCTTCGATACATCAAACAGCTGGGAGGTGGTTACT 397508075 67618 NM_000218.2(KCNQ1):c.1075C>T (p.Gln359Ter) KCNQ1 Sep 13, 2017 MeSH:D008133,MedGen:C0023976,SNOMED CT:9651007;MedGen:CN517202 Long QT syndrome;not provided germline 11 2585254 TCGGGGTTTGCCCTGAAGGTGCAGCAGAAGCAGAGGCAGAAGCACTTCAACCGGCAGATCC 780261665 360853 NM_000094.3(COL7A1):c.2005C>T (p.Arg669Ter) COL7A1 Oct 21, 2016 Human Phenotype Ontology:HP:0006101,MedGen:C0221352;Human Phenotype Ontology:HP:0007446,MedGen:C4024876;Human Phenotype Ontology:HP:0004322,MedGen:C0349588;Human Phenotype Ontology:HP:0001770,MedGen:C0265660;MedGen:CN517202 Finger syndactyly;Palmoplantar blistering;Short stature;Toe syndactyly;not provided germline;unknown 3 48590258 ACCACCTACCAGGTGGCTGTGTCGGTACTGCGAGGCAGAGAGGAGGGCCCTGCTGCAGTCA 985118235 409139 NM_001244189.1(KIAA0586):c.946C>T (p.Gln316Ter) KIAA0586 Mar 01, 2017 MedGen:CN517202 not provided germline 14 58444155 CAGCACATAAGGCATCTTGAAAAGTTACAACAACAACAAATAGATATTCAGGTATCTGTAA 551236750 213770 NM_004064.4(CDKN1B):c.-80C>T CDKN1B Jan 01, 2015 Human Phenotype Ontology:HP:0008200,MedGen:C0221002,SNOMED CT:36348003 Primary hyperparathyroidism germline 12 12717760 CAGTCGCTGGGCTTCCGAGAGGGGTTCGGGCTGCGTAGGGGCGCTTTGTTTTGTTCGGTTT 377549148 32109 NM_172369.4(C1QC):c.205C>T (p.Arg69Ter) C1QC Apr 01, 1996 MedGen:C3150902,OMIM:613652 C1q deficiency germline 1 22647250 TCTCCAGGAATCCCAGCCATTCCCGGGATCCGAGGACCCAAAGGGCAGAAGGGAGAACCCG 587783889 168343 NM_133433.3(NIPBL):c.1576C>T (p.Gln526Ter) NIPBL Feb 08, 2013 MedGen:CN029798,OMIM:122470 Cornelia de Lange syndrome 1 germline 5 36984756 GGTGCTACAGGAGGTAATAGACCAGCTTCTCAGGAGACGGGTTCTACGGGAAATGGGTCAA 28934906 26850 NM_004992.3(MECP2):c.473C>T (p.Thr158Met) MECP2 Jun 14, 2017 MedGen:C0162635,OMIM:105830,Orphanet:ORPHA72,SNOMED CT:76880004;MedGen:C1845336,OMIM:300496;MedGen:C1968550,OMIM:300055;MedGen:C0035372,OMIM:312750,Orphanet:ORPHA778,SNOMED CT:68618008;MedGen:C1968556,OMIM:300673,Orphanet:ORPHA209370;MedGen:CN517202;MedGen:CN169374 Angelman syndrome;Autism, susceptibility to, X-linked 3;Mental retardation, X-linked, syndromic 13;Rett syndrome;Severe neonatal-onset encephalopathy with microcephaly;not provided;not specified de novo;germline;maternal;unknown X 154031355 CATCCCTGGACCCTAATGATTTTGACTTCACGGTAACTGGGAGAGGGAGCCCCTCCCGGCG 864309650 215639 NM_001320327.1(CHCHD2):c.182C>T (p.Thr61Ile) CHCHD2 Jul 01, 2015 MedGen:C4225238,OMIM:616710 Parkinson disease 22, autosomal dominant germline 7 56104344 GGCAGCCAGGTCTGATGGCCCAGATGGCAACCACTGCAGCTGGCGTGGCTGTGGGCTCTGC 200646278 47624 NM_024312.4(GNPTAB):c.1090C>T (p.Arg364Ter) GNPTAB May 10, 2012 MedGen:C2673377,OMIM:252500,Orphanet:ORPHA576 I cell disease not provided 12 101770429 ATTCCATCCTGGCTGAACCTTGACAATCCTCGAGTGACAATAGTAACACACCAGGTACAGG 267606786 17515 NM_000401.3(EXT2):c.871C>T (p.Gln291Ter) EXT2 May 01, 2009 MedGen:C1851413,OMIM:133701 Multiple exostoses type 2 germline 11 44124817 AGTCCACGGCAATACTTCCTCCTGTCATCTCAGGTGGGTCTCCATCCTGAGTACAGAGAGG 924532501 481875 NM_012330.3(KAT6B):c.5254C>T (p.Gln1752Ter) KAT6B Jun 14, 2017 MedGen:CN517202 not provided germline 10 75030078 TCCCCTCCGACCTGCAGCGTCAAGTCTCCTCAAGGCTGTGTGGTGGAGAGGCCTCCGAGCA 587777157 106640 NM_144628.3(TBC1D20):c.199C>T (p.Arg67Ter) TBC1D20 Dec 05, 2013 MedGen:C3810265,OMIM:615663 Warburg micro syndrome 4 germline 20 447946 GAAGGAGGGCTCCTGACTGATGAGATCAGACGAAAAGTGTGGCCCAAGCTCCTCAATGTCA 267606739 20262 NM_019098.4(CNGB3):c.607C>T (p.Arg203Ter) CNGB3 Mar 27, 2017 MedGen:C1849792,OMIM:262300 Achromatopsia 3 germline;unknown 8 86668055 AAAAAGATGCCTTTAACAGAGTACTTAAAGCGAATTAAACTTCCAAACAGCATAGATTCAT 111033594 23005 NM_130838.1(UBE3A):c.1249C>T (p.Arg417Ter) UBE3A Jan 01, 1997 MedGen:C0162635,OMIM:105830,Orphanet:ORPHA72,SNOMED CT:76880004 Angelman syndrome germline 15 25370865 ACTGAACTTGGTGTTAAAACCCTGGATTGTCGAAAACCACTTATCCCTTTTGAAGAGTTTA 759101551 414419 NM_001013703.3(EIF2AK4):c.2857C>T (p.Q953*) EIF2AK4 - MedGen:C0340848,OMIM:234810,SNOMED CT:234161007 Familial pulmonary capillary hemangiomatosis germline 15 39997054 ACGGCTTCAGAAAGGATCTTTGTTCTCAACCAACTCAGAGATGTATGTATCAGGTGTTTTA -1 456775 NM_001458.4(FLNC):c.697C>T (p.Gln233Ter) FLNC Jun 13, 2017 MedGen:CN239310 Dilated Cardiomyopathy, Dominant germline 7 128837255 CAGCAGGCCGACGACTGGCTTGGGGTGCCCCAGGTACATGCGCAGATGGGGCAGGGGGGAA 587783519 169933 NM_178151.2(DCX):c.115C>T (p.Arg39Ter) DCX Feb 08, 2013 Human Phenotype Ontology:HP:0002282,MedGen:C0008519 Heterotopia germline X 111410284 CCCACTCACAGCGCCCACTGTAGCTTCTACCGAACCAGAACCTTGCAGGCACTGAGTAATG 267607069 31803 NM_001044.4(SLC6A3):c.1184C>T (p.Pro395Leu) SLC6A3 Jun 01, 2009 MedGen:C2751067,OMIM:613135,Orphanet:ORPHA238455 Infantile Parkinsonism-dystonia germline 5 1411328 CAGGGCCAGGGCTGATCTTCATCATCTACCCGGAAGCCATCGCCACGCTCCCTCTGTCCTC 34594498 47737 NM_198578.3(LRRK2):c.1256C>T (p.Ala419Val) LRRK2 Sep 13, 2012 MedGen:C1846862,OMIM:607060 Parkinson disease 8, autosomal dominant not provided 12 40252984 CTTCATCAAAGGAAGTTTTCCAGGCATCTGCGAATGCATTGTCAACTCTCTTAGAACAAAA 121908973 21984 NM_002485.4(NBN):c.976C>T (p.Gln326Ter) NBN Mar 15, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0398791,OMIM:251260,Orphanet:ORPHA647,SNOMED CT:234638009 Hereditary cancer-predisposing syndrome;Microcephaly, normal intelligence and immunodeficiency germline 8 89964428 TTCATGACTACAAAGAATTACTGTGATCCTCAGGGCCATCCCAGTACAGGTAATTGAAGCA 747676107 404697 NM_001440.3(EXTL3):c.1015C>T (p.Arg339Trp) EXTL3 Apr 05, 2017 MedGen:CN241841,OMIM:617425 Immunoskeletal dysplasia with neurodevelopmental abnormalities germline 8 28717074 ATGGAAATCCCACCACAGGTGCCGGTGAAGCGGAAATATCTCTTCACCTTCCAGGGCGAGA 796052964 201607 NM_001165963.1(SCN1A):c.842C>T (p.Pro281Leu) SCN1A Apr 15, 2013 MedGen:CN517202 not provided germline 2 166051841 GCAACCTGAGGAATAAATGTATACAATGGCCTCCCACCAATGCTTCCTTGGAGGAACATAG 397515489 77881 NM_015284.3(SZT2):c.73C>T (p.Arg25Ter) SZT2 Sep 05, 2013 MedGen:C3809624,OMIM:615476 Early infantile epileptic encephalopathy 18 germline 1 43403222 CAGGTGTTCCTGTTAATGAAAAAGGATTATCGAATCTCCCGAAATGTTCGCCTGGCTTGGT 796052126 200981 NM_203290.3(POLR1C):c.77C>T (p.Thr26Ile) POLR1C Jul 07, 2015 MedGen:C4225305,OMIM:616494 Leukodystrophy, hypomyelinating, 11 germline 6 43517313 ACAAATTCGTCCCTTTGCTCTAGGTCCATACTACTGACTTTCCCGGTAACTATTCCGGTTA 587783892 168346 NM_133433.3(NIPBL):c.1885C>T (p.Arg629Ter) NIPBL Oct 05, 2015 MedGen:CN029798,OMIM:122470 Cornelia de Lange syndrome 1 germline 5 36985065 AGATTAGCAGAATCTAAACCAAATGAAAACCGATTGGTGGAGACAAAATCAAGTGAAAATA 62507344 15662 NM_000277.2(PAH):c.1066-3C>T PAH Nov 06, 2014 MedGen:C0031485,OMIM:261600,Orphanet:ORPHA716,SNOMED CT:154735006;MedGen:CN517202 Phenylketonuria;not provided germline;unknown 12 102843782 CAGTGATAATAACTTTTCACTTGGGGCCTACAGTACTGCTTATCAGAGAAGCCAAAGCTTC 1057524176 369126 NM_000441.1(SLC26A4):c.2206C>T (p.Gln736Ter) SLC26A4 Dec 29, 2016 MedGen:CN517202 not provided germline 7 107710170 ATACTCTATCTACAGAACCAAGTGAAATCTCAAGAGGGTCAAGGTTCCATTTTAGAAACGG 483352832 136692 NM_001001430.2(TNNT2):c.430C>T (p.Arg144Trp) TNNT2 - MedGen:C2750995,OMIM:613172 Dilated cardiomyopathy 1DD germline 1 201364327 CGGGCCGAGCAGCAGCGCATCCGGAATGAGCGGGAGAAGGAGCGGCAGAACCGCCTGGCTG 137852451 25338 NM_000132.3(F8):c.5938C>T (p.His1980Tyr) F8 Jan 01, 1995 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154903966 GAAAACATCCATTCTATTCATTTCAGTGGACATGTGTTCACTGTACGAAAAAAAGAGGAGT 121908803 68693 NM_000492.3(CFTR):c.613C>T (p.Pro205Ser) CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline 7 117535281 CTTGCATTGGCACATTTCGTGTGGATCGCTCCTTTGCAAGTGGCACTCCTCATGGGGCTAA 104895046 132512 NM_005732.3(RAD50):c.1114C>T (p.Gln372Ter) RAD50 Nov 01, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline;unknown 5 132588749 GAACATATCCGAGCTAGAGATTCATTAATTCAGTCTTTGGCAACACAGCTAGAATTGGATG 386833697 70885 NM_001042432.1(CLN3):c.1054C>T (p.Gln352Ter) CLN3 Oct 10, 2017 MedGen:C0751383,OMIM:204200,Orphanet:ORPHA79264,SNOMED CT:61663001;MedGen:CN517202 Juvenile neuronal ceroid lipofuscinosis;not provided germline 16 28482107 ATCCGTTTCACCTGGGCCCTGGCCCTGCTGCAGGTACCAAACCCCTGCCCCTCACTTCACT 151242354 187999 NM_000124.3(ERCC6):c.2167C>T (p.Gln723Ter) ERCC6 May 23, 2017 MedGen:C0751038,OMIM:133540,Orphanet:ORPHA90322;MedGen:CN517202 Cockayne syndrome B;not provided germline 10 49482689 ATGGGGGGATATTCAAATGCTTCCCCAGTACAGGTAAAATATTAGGATGATAATACTTTTG 538329212 425885 NM_006077.3(MICU1):c.355C>T (p.Arg119Ter) MICU1 Oct 09, 2015 MedGen:CN517202 not provided germline 10 72551317 CTTTAGGTGATGGAATATGAGAATAGGATTCGAGCCTACTCCACGCCAGACAAAATCTTCC 398123481 173736 NM_000551.3(VHL):c.256C>T (p.Pro86Ser) VHL Sep 28, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0019562,OMIM:193300,Orphanet:ORPHA892,SNOMED CT:46659004;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Von Hippel-Lindau syndrome;not provided germline 3 10142103 TTCTGCAATCGCAGTCCGCGCGTCGTGCTGCCCGTATGGCTCAACTTCGACGGCGAGCCGC 57120761 31213 NM_002055.4(GFAP):c.226C>T (p.Leu76Phe) GFAP Jan 08, 2015 MedGen:C0270726,OMIM:203450,Orphanet:ORPHA58,SNOMED CT:81854007;MedGen:CN517202 Alexander's disease;not provided germline 17 44915261 CGGGCCAGTGAGCGGGCAGAGATGATGGAGCTCAATGACCGCTTTGCCAGCTACATCGAGA 864321634 216949 NM_100264.2(WAC):c.1717C>T (p.Gln573Ter) WAC Nov 01, 2015 MedGen:C4225239,OMIM:616708 Desanto-shinawi syndrome germline 10 28617762 TTAAGATCTTTAGTCCGAGTATGTGAAATTCAAGCAACTTTGCGAGAGCAAAGGTAAGTCT 371334239 486961 NM_000091.4(COL4A3):c.1216C>T (p.Arg406Ter) COL4A3 Jun 26, 2016 MedGen:C1567744,OMIM:203780,Orphanet:ORPHA88919 Alport syndrome, autosomal recessive germline 2 227263845 TGGCCAGGCCTGAAAGGAAGTAAAGGGGAACGAGGCCGCCCAGGAAAGGATGCCATGGGGA -1 427287 NM_000038.5(APC):c.3682C>T (p.Gln1228Ter) APC Mar 27, 2015 MedGen:CN240755 Familial adenomatous polyposis germline 5 112839276 ACGTCCACACCTTCATCTAATGCCAAGAGGCAGAATCAGCTCCATCCAAGTTCTGCACAGA 797044813 204270 NM_000084.4(CLCN5):c.1909C>T (p.Arg637Ter) CLCN5 Dec 01, 2015 MedGen:C1848336,OMIM:300009;MedGen:CN517202 Dent disease 1;not provided germline X 50090490 GAGTCCCAAAGACTTGTGGGCTTTGTCCTCCGAAGAGATCTCATTATTTCAATTGGTAAGG 796053197 201344 NM_021007.2(SCN2A):c.2809C>T (p.Arg937Cys) SCN2A Apr 12, 2017 MedGen:CN517202 not provided germline 2 165344801 GACTTTTTCCACTCCTTCCTGATCGTGTTCCGCGTGCTGTGTGGAGAGTGGATAGAGACCA 374946172 68148 NM_000492.3(CFTR):c.2353C>T (p.Arg785Ter) CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline 7 117592520 CACTCAGTTAACCAAGGTCAGAACATTCACCGAAAGACAACAGCATCCACACGAAAAGTGT 143343083 169011 NM_004004.5(GJB2):c.298C>T (p.His100Tyr) GJB2 Mar 14, 2017 MedGen:C2673759,OMIM:220290;Human Phenotype Ontology:HP:0000365,MedGen:C0018772;MedGen:CN043648,Orphanet:ORPHA87884;MedGen:CN169374 Deafness, autosomal recessive 1A;Hearing impairment;Nonsyndromic hearing loss and deafness;not specified germline;unknown 13 20189284 CTAGTGGCCATGCACGTGGCCTACCGGAGACATGAGAAGAAGAGGAAGTTCATCAAGGGGG 137853236 29967 NM_000545.6(HNF1A):c.1340C>T (p.Pro447Leu) HNF1A Apr 01, 1997 MedGen:C1838100,OMIM:600496 Maturity-onset diabetes of the young, type 3 germline 12 120997504 GCCTGGCCTCCACGCAGGCACAGAGTGTGCCGGTCATCAACAGCATGGGCAGCAGCCTGAC 386834099 71318 NM_017890.4(VPS13B):c.5827C>T (p.Arg1943Ter) VPS13B Oct 31, 2016 MedGen:C0265223,OMIM:216550,Orphanet:ORPHA193,SNOMED CT:56604005 Cohen syndrome unknown 8 99642342 CTTGGTATAACTATTGTTCGGCAGCCTGGTCGAAGAGGAACTGGTGACTTACAGCTAGAGC 761785906 211094 NM_015697.7(COQ2):c.950C>T (p.Thr317Met) COQ2 Mar 31, 2014 MedGen:CN517202 not provided germline 4 83267737 GAGATGATGTTTTGATTGGTCTTAAGTCAACGGCTCTGCGGTTCGGAGAAAATACCAAGCC 387907140 40165 NM_020732.3(ARID1B):c.3919C>T (p.Gln1307Ter) ARID1B Mar 09, 2012 MedGen:CN029606,OMIM:135900 Coffin-Siris syndrome 1 germline 6 157196221 ACGCAAGGACAGATGCCCAACAGCAGCATGCAGGACATGTACAACCAAAGTCCCTCCGGAG 121908178 19612 NM_031885.3(BBS2):c.943C>T (p.Arg315Trp) BBS2 Sep 21, 2001 MedGen:C4016956 Bardet-biedl syndrome 2/4, digenic germline 16 56502454 ATACTTGCGGTTTTTTCCTTCTGTTCAGTCCGGGGCTACCTGCCTGGCACGGCTGAGATGA 368609628 440555 NM_001165963.2(SCN1A):c.3496C>T (p.Gln1166Ter) SCN1A Aug 19, 2016 MedGen:CN517202 not provided germline 2 166015661 ACTGTGGACATCGGCGCACCTGTAGAAGAACAGCCCGTAGTGGAACCTGAAGAAACTCTTG 34695403 18606 NM_002225.3(IVD):c.157C>T (p.Arg53Cys) IVD Feb 01, 2000 MedGen:C0268575,OMIM:243500,Orphanet:ORPHA33,SNOMED CT:87827003 Isovaleryl-CoA dehydrogenase deficiency germline 15 40407639 GGCATCTGTTTACCTCTCTCCTATTAGCTTCGTCAGACCATGGCTAAGTTCCTTCAGGAGC 80338794 20654 NM_012434.4(SLC17A5):c.115C>T (p.Arg39Cys) SLC17A5 Aug 21, 2015 MedGen:C1096903,OMIM:604369,Orphanet:ORPHA309334,SNOMED CT:87074006;MedGen:CN517202 Salla disease;not provided germline;unknown 6 73644583 TTTATTTCAGCTCCAGTGTGCTGCTCTGCTCGTTACAACTTAGCAATTTTGGCCTTTTTTG 1085307883 415756 NM_003639.4(IKBKG):c.766C>T (p.Arg256Ter) IKBKG Feb 08, 2017 MedGen:CN517202 not provided germline X 154561782 AAGAGCAGCGTGGTGGGCAGTGAGCGGAAGCGAGTGAGTGCGACCACTGGGGCTCTAGGGC 369368181 179798 NM_000271.4(NPC1):c.1628C>T (p.Pro543Leu) NPC1 Jul 27, 2017 MedGen:C3179455,OMIM:257220 Niemann-Pick disease type C1 germline;unknown 18 23551653 GTCTGGGTACGTTTGGTGGACCAGTGTTCCCGTGGCTTGTGTTGGGAGGCTATGATGGTAA 72558454 26038 NM_000531.5(OTC):c.829C>T (p.Arg277Trp) OTC Jul 28, 2016 MedGen:C0268542,OMIM:311250,Orphanet:ORPHA664,SNOMED CT:80908008;MedGen:CN517202 Ornithine carbamoyltransferase deficiency;not provided germline;unknown X 38408987 AGCATGGGACAAGAAGAGGAGAAGAAAAAGCGGCTCCAGGCTTTCCAAGGTTACCAGGTTA 397507177 45930 NM_005732.3(RAD50):c.2821C>T (p.Gln941Ter) RAD50 Mar 21, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 5 132608717 AACAAAAAAAATACAAGCAACAAAATAGCACAGGATAAAGTAAGATTTCATTTATATATTT 527236151 152920 NM_001194958.2(KCNJ18):c.127C>T (p.Arg43Cys) KCNJ18 Jul 31, 2014 MedGen:C0268446,OMIM:188580,Orphanet:ORPHA79102,SNOMED CT:30967002 Thyrotoxic periodic paralysis germline 17 21702913 AACGGCAAGGTGCACACGCGGCGCAGGTGCCGCAACCGCTTCGTCAAGAAGAATGGCCAGT 80357089 69512 NM_007294.3(BRCA1):c.3331C>T (p.Gln1111Ter) BRCA1 Sep 08, 2016 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome germline 17 43092200 AGTAATTGTAAGCATCCTGAAATAAAAAAGCAAGAATATGAAGAAGTAGTTCAGACTGTTA 121913593 29217 NM_000530.7(MPZ):c.643C>T (p.Gln215Ter) MPZ Sep 01, 1996 MedGen:CN069993 Neuropathy, congenital hypomyelinating, autosomal dominant germline 1 161306110 CCAGGAAAGGACGCGTCGAAGCGCGGGCGGCAGGTTAGCGGGACTTGGGGCCTAGACAAGA 758036385 453806 NM_001080522.2(CC2D2A):c.3988C>T (p.Arg1330Ter) CC2D2A Feb 02, 2017 Human Phenotype Ontology:HP:0002335,MedGen:C0431399,Orphanet:ORPHA475,SNOMED CT:253175003,SNOMED CT:716997004;MedGen:C0265215,Orphanet:ORPHA564,SNOMED CT:29076005 Joubert syndrome;Meckel-Gruber syndrome germline 4 15586169 CTCATTTTGATTATACAGGAACTGGTGGCTCGATATGTGTCCTTGATTCCCTTCTTGCCTG 730880099 178699 NM_000138.4(FBN1):c.1633C>T (p.Arg545Cys) FBN1 Mar 23, 2017 MedGen:CN229799;MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:CN517202;MedGen:CN169374 Marfan Syndrome/Loeys-Dietz Syndrome/Familial Thoracic Aortic Aneurysms and Dissections;Marfan syndrome;not provided;not specified germline 15 48510125 TTACAGAATGGCCGGATCTGCAATAATGGACGCTGCATCAACACAGATGGCAGTTTTCATT 587778080 137376 NM_000051.3(ATM):c.8545C>T (p.Arg2849Ter) ATM Aug 21, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202;MedGen:CN169374 Ataxia-telangiectasia syndrome;Hereditary cancer-predisposing syndrome;not provided;not specified germline 11 108345869 TTCTTGGATCCAGCTATTTGGTTTGAGAAGCGATTGGCTTATACGCGCAGTGTAGCTACTT 1057520537 367062 NM_006302.2(MOGS):c.1801C>T (p.Arg601Ter) MOGS Mar 12, 2015 MedGen:CN517202 not provided germline 2 74461988 CCTTCAGTAACCGAGCGGCACCTGGACCTGCGATGTTGGGTGGCACTGGGTGCCCGTGTGC 1060503584 400415 NM_177438.2(DICER1):c.2233C>T (p.Arg745Ter) DICER1 Dec 26, 2016 MedGen:CN072455,OMIM:601200 DICER1-related pleuropulmonary blastoma cancer predisposition syndrome germline 14 95111340 AGTGTTCCAGGAAGACCAGGTTCCACGAAACGAAGGCAGTGCTACCCAAAAGCAGTTAGTA 766394024 478020 NM_024675.3(PALB2):c.3130C>T (p.Gln1044Ter) PALB2 Apr 16, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 16 23614075 TTTTGTTATCTAAGGAATTTAAAAACTGGTCAACTCCTGAAAAAGATGCACATTGATGATT 752059006 264512 NM_014363.5(SACS):c.2182C>T (p.Arg728Ter) SACS May 31, 2016 Human Phenotype Ontology:HP:0012443,MedGen:C4021085;MedGen:CN517202 Abnormality of brain morphology;not provided germline;inherited 13 23353788 GTGGCTGCTTTAAAGGAAGCTGCCCAAACCCGAGGTATTATAGTTTAGTATTCTTTTAAAT 1064793896 405022 NM_000228.2(LAMB3):c.241C>T (p.Arg81Ter) LAMB3 Aug 07, 2015 MedGen:CN517202 not provided germline 1 209638591 TCCAGGCAGCCTCACAACTACTACAGTCACCGAGTAGAGAATGTGGCTTCATCCTCCGGCC 267606724 17077 NM_017780.3(CHD7):c.4795C>T (p.Gln1599Ter) CHD7 Jul 21, 2015 MedGen:C0265354,OMIM:214800,Orphanet:ORPHA138,SNOMED CT:47535005;MedGen:CN517202 CHARGE association;not provided germline 8 60841997 GCAAAGCCACGGCGTCCCCAGGATAAGTCACAGGGCTATGCAAGGAGTGAATGTTTCAGGG 1057518236 360146 NM_001271.3(CHD2):c.1462C>T (p.Gln488Ter) CHD2 Nov 25, 2016 MedGen:CN517202 not provided germline 15 92949036 GGAGGGGAGAATCTGGAACTTCGAGATTATCAGCTAGAAGGTCTAAACTGGCTAGCTCATT 104894537 22467 NM_002968.2(SALL1):c.826C>T (p.Arg276Ter) SALL1 Jan 14, 2016 MedGen:CN034849,OMIM:107480 Townes-Brocks syndrome 1 germline 16 51141396 ACATCTTCTAGTCCTTCTCAAGGTACTTTACGAACATCTGCCAACCCCTTGTCCACGCTAA 774906916 414422 NM_001013703.3(EIF2AK4):c.3344C>T (p.Pro1115Leu) EIF2AK4 - MedGen:C0340848,OMIM:234810,SNOMED CT:234161007 Familial pulmonary capillary hemangiomatosis germline 15 40003301 TGGACCACAGCGGGATGCTGGTGATGCTTCCTTTTGACCTGCGGGTGAGGCTGGGAACACA 587776959 59435 NM_003441.3(ZNF141):c.1421C>T (p.Thr474Ile) ZNF141 Jun 27, 2013 MedGen:C3808889,OMIM:615226 Postaxial polydactyly type A6 germline 4 373858 CACACCTGAATAAACATAAGAAAATTCATACTTGAGAGAAATCCTACAAATGTAAAGAATG 1085307201 414133 NM_001204.6(BMPR2):c.274C>T (p.Q92*) BMPR2 - MedGen:C0152171,OMIM:178600,SNOMED CT:26174007 Primary pulmonary hypertension germline 2 202467545 ATAGGATGTTGGTCTCACATTGGAGATCCCCAAGAGTGTCACTATGAAGAATGTGTAGTAA 397515456 75319 NM_020631.4(PLEKHG5):c.1988C>T (p.Thr663Met) PLEKHG5 Jul 12, 2013 MedGen:C3809309,OMIM:615376,Orphanet:ORPHA369867 Charcot-Marie-Tooth disease, recessive intermediate c germline 1 6469396 ATGAGTTTCACAGTGCTGTAGGGGCCTACACGTTCCAGGCCAGTGGCCAGGCCTTGTGCCG 137852759 23821 NM_005591.3(MRE11):c.1897C>T (p.Arg633Ter) MRE11 Jan 19, 2017 MedGen:C1858391,OMIM:604391,Orphanet:ORPHA251347;MedGen:C0027672,SNOMED CT:699346009 Ataxia-telangiectasia-like disorder 1;Hereditary cancer-predisposing syndrome germline 11 94437206 GCCTTTAAATCTACAAGACAGCAGCCTTCCCGAAATGTCACTACTAAGAATTATTCAGAGG 515726186 136334 NM_015713.4(RRM2B):c.328C>T (p.Arg110Cys) RRM2B Apr 17, 2014 MedGen:CN187502 RRM2B-related mitochondrial disease germline 8 102225012 TATCTATTTTCCTTATCTTCTTAGGTGGAGCGCTTTAGTCAGGAGGTGCAGGTTCCAGAGG 397509423 75122 NM_013334.3(GMPPB):c.220C>T (p.Arg74Ter) GMPPB Jul 11, 2013 MedGen:C3809216,OMIM:615350 Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type a, 14 germline 3 49723293 GGGGGGGCCTCTTCCTTCCAGCTGGGAATCCGAATCTCCATGTCCCATGAAGAGGAGCCTT 587777321 132604 NM_000856.5(GUCY1A1):c.1045C>T (p.Arg349Ter) GUCY1A1 Mar 06, 2014 MedGen:C3810403,OMIM:615750,Orphanet:ORPHA401945 Moyamoya disease 6 with achalasia germline 4 155711210 ATGACTATGTTGAATATGCAGTTTGTTGTACGAGTGAGGAGATGGGACAACTCTGTGAAAA 137852831 15549 NM_001142446.1(ANK1):c.5620C>T (p.Arg1874Ter) ANK1 May 01, 1998 MedGen:C2674218,OMIM:182900 Spherocytosis type 1 germline 8 41661923 TTCCTTTCCTAGATCATTCGCAAGGTGGTTCGACAGATAGACTTGTCCAGCGCCGATGCCG 1114167469 419820 NM_130799.2(MEN1):c.959C>T (p.Pro320Leu) MEN1 Aug 26, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 11 64806322 AGACCTACTATCGGGATGAACACATCTACCCCTACATGTACCTGGCTGGCTACCACTGTCG 11545658 391174 NM_000143.3(FH):c.679C>T (p.Gln227Ter) FH Oct 21, 2016 MedGen:C0342770,OMIM:606812,Orphanet:ORPHA24,SNOMED CT:237983002 Fumarase deficiency germline 1 241508662 GCTCTTGATGCAAAATCCAAAGAGTTTGCACAGATCATCAAGATTGGACGTACTCATACTC 886041637 264143 NM_000388.3(CASR):c.1630C>T (p.Arg544Ter) CASR Mar 22, 2016 MedGen:CN517202 not provided germline 3 122282134 GTCCTCCAGGTGCCCTTCTCCAACTGCAGCCGAGACTGCCTGGCAGGGACCAGGAAAGGGA 587784384 170184 NM_006517.4(SLC16A2):c.1111C>T (p.Arg371Cys) SLC16A2 May 19, 2014 MedGen:C0795889,OMIM:300523,Orphanet:ORPHA59;MedGen:CN517202 Allan-Herndon-Dudley syndrome;not provided germline X 74525834 GTGTGTATTGGGGCTACCTCAGGCCTTGGGCGTCTTGTGTCAGGCCACATCAGTGACTCCA 1064796758 407852 NM_016628.4(WAC):c.1198C>T (p.Gln400Ter) WAC Mar 09, 2017 MedGen:CN517202 not provided germline 10 28610731 CTTACAGCAGCTGTGACACAAGCCTCACTGCAGTCTATAATTCATAAGTTTCTTACTGCTG 200070245 204639 NM_032436.3(CHAMP1):c.1768C>T (p.Gln590Ter) CHAMP1 Sep 03, 2015 MedGen:C4225275,OMIM:616579;MedGen:CN232368 Mental retardation, autosomal dominant 40;intellectual disability with severe speech impairment de novo;germline 13 114325610 GATGAACTACAAATAGATGCCATAGATGATCAAAAATGTGATATTTTGGTTCAGGAAGAAC 121918736 79492 NM_006920.4(SCN1A):c.2782C>T (p.His928Tyr) SCN1A Dec 20, 2014 MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002 Severe myoclonic epilepsy in infancy de novo;germline 2 166037907 CTCCCACGCTGGCACATGAATGACTTCTTCCACTCCTTCCTGATTGTGTTCCGCGTGCTGT 886041078 263764 NM_005506.3(SCARB2):c.1270C>T (p.Arg424Ter) SCARB2 Mar 05, 2015 MedGen:C0751779,OMIM:254900,Orphanet:ORPHA163696 Epilepsy, progressive myoclonic 4, with or without renal failure germline 4 76163353 AGTGTTCACATTGATAAAGAGACGGCGAGTCGACTGAAGTCTATGATTAACACTACTTTGA 386134155 51288 NM_000096.3(CP):c.643C>T (p.Arg215Ter) CP Apr 18, 2013 MedGen:C0878682,OMIM:604290,Orphanet:ORPHA48818,SNOMED CT:124224004 Deficiency of ferroxidase not provided 3 149209349 CTAGATAAAGAAAAAGAAAAACATATTGACCGAGAATTTGTGGTGATGTTTTCTGTGGTGG 188119157 57094 NM_144612.6(LOXHD1):c.2497C>T (p.Arg833Ter) LOXHD1 Mar 31, 2017 MedGen:CN043648,Orphanet:ORPHA87884;MedGen:CN517202 Nonsyndromic hearing loss and deafness;not provided germline 18 46563166 GGAGATGTGGGTGGCGCAGGCACCAGTGCCCGAGTCTACATGCAGATCTATGGAGAGAAAG 281874681 35794 NM_000495.4(COL4A5):c.1856C>T (p.Pro619Leu) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108598778 GTTTACCAGGCCTCCCAGGGAATATAGGGCCTATGGGTCCCCCTGGTTTCGGCCCTCCAGG 606231473 171707 NM_000760.3(CSF3R):c.922C>T (p.Arg308Cys) CSF3R Jun 12, 2014 MedGen:C4310764,OMIM:617014,Orphanet:ORPHA420702;Human Phenotype Ontology:HP:0005541,MedGen:C1853118,Orphanet:ORPHA42738 Neutropenia, severe congenital, 7, autosomal recessive;Severe congenital neutropenia germline 1 36472313 CTCCCAGCCACGGCCTACACCCTGCAGATACGCTGCATCCGCTGGCCCCTGCCTGGCCACT 748144899 33392 NM_000080.3(CHRNE):c.-96C>T CHRNE Apr 01, 1999 MedGen:C1837091,OMIM:608931 Myasthenic syndrome, congenital, associated with acetylcholine receptor deficiency germline 17 4903159 AGAGGATTAGGTGACAGTCCCCTAACAGCCCGGAACTAACACCCTCCTCCCCCTCACACAG 137853334 24249 NM_000457.4(HNF4A):c.829C>T (p.Gln277Ter) HNF4A Dec 05, 1996 MedGen:C1852093,OMIM:125850 Maturity-onset diabetes of the young, type 1 germline 20 44419813 CGCATCCTTGACGAGCTGGTGCTGCCCTTCCAGGAGCTGCAGATCGATGACAATGAGTATG 80002943 17941 NM_000419.4(ITGA2B):c.2870C>T (p.Ser957Leu) ITGA2B Mar 01, 2010 MedGen:C0040015,OMIM:273800,Orphanet:ORPHA849,SNOMED CT:32942005 Glanzmann thrombasthenia germline 17 44374732 AGAGGCCTCTGGATCAGTTTGTGCTGCAGTCGCACGCATGGTTCAACGTGTCCTCCCTCCC 398123935 100484 NM_004006.2(DMD):c.3295C>T (p.Gln1099Ter) DMD Mar 07, 2016 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009;MedGen:C3668940,OMIM:302045;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Becker muscular dystrophy;Dilated cardiomyopathy 3B;Duchenne muscular dystrophy germline X 32463576 TTATTTTCTTAGCTTTTAGTCAGTGATATTCAGACAATTCAGCCCAGTCTAAACAGTGTCA 80356992 69906 NM_007294.3(BRCA1):c.4612C>T (p.Gln1538Ter) BRCA1 Apr 04, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline 17 43074394 CTCATTAAGGTTGTTGATGTGGAGGAGCAACAGCTGGAAGAGTCTGGGCCACACGATTTGA 387907104 40050 NM_014797.2(ZBTB24):c.958C>T (p.Arg320Ter) ZBTB24 Jun 10, 2011 MedGen:C3279748,OMIM:614069 Immunodeficiency-centromeric instability-facial anomalies syndrome 2 germline 6 109476925 CATGCTTCTGGGGCTCTTCTTCCAGGGGAGCGACCTTTCAAATGTAATGAGTGTGGAAAAG 397514690 59370 NM_000537.3(REN):c.127C>T (p.Arg43Ter) REN Feb 01, 2012 Human Phenotype Ontology:HP:0008660,MedGen:C0266313,OMIM:267430,SNOMED CT:204949001 Renal dysplasia germline 1 204162135 AGGATCTTCCTCAAGAGAATGCCCTCAATCCGAGAAAGCCTGAAGGAACGAGGTGTGGACA 111033591 20207 NM_213655.4(WNK1):c.3226C>T (p.Arg1076Ter) WNK1 Feb 13, 2017 MedGen:C2752089,OMIM:201300;MedGen:CN517202 Hereditary sensory and autonomic neuropathy type IIA;not provided germline 12 868697 GGAGGTGGAATTTTACCTCAGCGTGTTTACCGAAATCGGCAGGTTGCAGTGGACTTGAATC 200750564 360827 NM_000523.3(HOXD13):c.820C>T (p.Arg274Ter) HOXD13 Sep 07, 2016 Human Phenotype Ontology:HP:0000047,MedGen:C1691215;Human Phenotype Ontology:HP:0003251,MedGen:C0021364,Orphanet:ORPHA98048,SNOMED CT:2904007;Human Phenotype Ontology:HP:0006159,MedGen:C4021606;Human Phenotype Ontology:HP:0000798,MedGen:C0028960;Human Phenotype Ontology:HP:0010442,MedGen:C2117329;Human Phenotype Ontology:HP:0001159,MedGen:C2117411;MedGen:CN517202 Hypospadias;Male infertility;Mesoaxial hand polydactyly;Oligospermia;Polydactyly;Syndactyly;not provided germline;unknown 2 176094518 GCTCTAAATCAGCCGGACATGTGCGTCTACCGAAGAGGGAGGAAGAAGAGAGTGCCTTACA 74315303 23461 NM_000396.3(CTSK):c.721C>T (p.Arg241Ter) CTSK Dec 02, 2014 MedGen:C0238402,OMIM:265800,Orphanet:ORPHA763,SNOMED CT:89647000 Pyknodysostosis germline;unknown 1 150799607 AATGAGAAAGCCCTGAAGAGGGCAGTGGCCCGAGTGGGACCTGTCTCTGTGGCCATTGATG -1 455350 NM_001369.2(DNAH5):c.10858C>T (p.Arg3620Ter) DNAH5 May 08, 2017 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244 Ciliary dyskinesia germline 5 13753247 GGCAAGATCTGGATTAAAAATAAAGAAAGCCGAAATGAACTCCAGGTAATTTGTGTTTTAG 63750192 95283 NM_000249.3(MLH1):c.1624C>T (p.Gln542Ter) MLH1 Jan 23, 2015 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Lynch syndrome germline 3 37040251 GGCTGTGTGAATCCTCAGTGGGCCTTGGCACAGCATCAAACCAAGTTATACCTTCTCAACA 864321622 217216 NM_032504.1(UNC80):c.3793C>T (p.Arg1265Ter) UNC80 Jan 07, 2016 Human Phenotype Ontology:HP:0001298,MedGen:C1963101;MedGen:C4225203,OMIM:616801 Encephalopathy;Hypotonia, infantile, with psychomotor retardation and characteristic facies 2 germline 2 209872917 CGGGGACGCTCTCCCATTGTGGGCAACAAGCGAAACCAGAAGCTGCAGTGGAATGCAGCCA 587778801 76788 NM_000142.4(FGFR3):c.597C>T (p.His199=) FGFR3 Sep 26, 2013 MedGen:C0410529,OMIM:146000,Orphanet:ORPHA429,SNOMED CT:205468002 Hypochondroplasia not provided 4 1801518 GAAGAACGGCAGGGAGTTCCGCGGCGAGCACCGCATTGGAGGCATCAAGGTGGGCGCGGCG 886041303 264453 NM_004055.4(CAPN5):c.865C>T (p.Arg289Trp) CAPN5 May 02, 2016 MedGen:CN517202 not provided de novo;germline 11 77115560 ATGATCCGCCTGCGCAACCCCTGGGGCGAGCGGGAGTGGAACGGGCCCTGGAGTGACACGT 387906932 39517 NM_033517.1(SHANK3):c.3349C>T (p.Arg1117Ter) SHANK3 Apr 27, 2010 MedGen:C3151380,OMIM:613950 Schizophrenia 15 germline 22 50721182 CCCCTGGCCCTTGCCCTGGCTGCCCGAGAGCGAGCTCTGGCCTCCCAGGCGCCCTCCCGGT 878855320 360456 NM_001972.3(ELANE):c.137C>T (p.Ser46Phe) ELANE Dec 09, 2016 MedGen:CN517202 not provided germline 19 852945 CGCGGCCCCACGCGTGGCCCTTCATGGTGTCCCTGCAGCTGCGCGGAGGCCACTTCTGCGG 752097874 260061 NM_019066.4(MAGEL2):c.1996C>T (p.Gln666Ter) MAGEL2 Aug 09, 2016 MedGen:CN517202 not provided germline 15 23645747 CAAAAAGCCGTGCAAATCCAGCTACCCCCCCAGCAGGCCCAGGCATCGGGTCCGCAAGCGG 137853930 34285 NM_004750.4(CRLF1):c.413C>T (p.Pro138Leu) CRLF1 Mar 03, 2011 MedGen:C1848947,OMIM:272430 Cold-induced sweating syndrome 1 not provided 19 18598886 CTCCCCTTCTCCCAGTGCCCCCAGAGAAACCCGTCAACATCAGCTGCTGGTCCAAGAACAT 121912950 32166 NM_080680.2(COL11A2):c.4135C>T (p.Arg1379Ter) COL11A2 Oct 01, 2004 MedGen:C1861481,OMIM:184840 Stickler syndrome, type 3 germline 6 33167305 GCCCCCTCAAATCTTCAGGGTCAGCAAGGCCGACCTGGAGCTACAGGCCAGGCTGGGCCCC 148865119 210450 NM_000071.2(CBS):c.146C>T (p.Pro49Leu) CBS Sep 01, 2017 MedGen:C3150344,OMIM:236200;MedGen:CN118826,Orphanet:ORPHA91387;MedGen:CN517202 Homocystinuria due to CBS deficiency;Thoracic aortic aneurysm and aortic dissection;not provided germline;unknown 21 43072048 AGGAGCCCCTGTGGATCCGGCCCGATGCTCCGAGCAGGTGCACCTGGCAGCTGGGCCGGCC 727504867 172515 NM_206933.2(USH2A):c.14248C>T (p.Gln4750Ter) USH2A Dec 12, 2013 MedGen:C1848634,OMIM:276901 Usher syndrome, type 2A germline 1 215650687 GCCCCCACGTTCCATGTGATCTCTTCTACCCAAGCAGTGGTCAACATCAGTGCCCCTGGGA 1064796972 410364 NM_030632.2(ASXL3):c.4360C>T (p.Gln1454Ter) ASXL3 Mar 17, 2017 MedGen:CN517202 not provided germline 18 33744208 CGAAACAGGGCAGATAATTCTGGAAAACCTCAGCAACCACCAGGGGGCTTTGCACCAGCAG 587784258 169346 NM_000430.3(PAFAH1B1):c.265C>T (p.Arg89Ter) PAFAH1B1 Jan 26, 2017 MedGen:C1843916,OMIM:607432;MedGen:CN517202 Lissencephaly 1;not provided germline 17 2667064 TTTACGTCAGGTGGACCTCTTGGTCAGAAACGAGACCCAAAAGAATGGATTCCCCGTCCGC 387906992 39699 NM_133468.4(BMPER):c.925C>T (p.Gln309Ter) BMPER Oct 08, 2010 MedGen:C1842691,OMIM:608022,Orphanet:ORPHA66637 Diaphanospondylodysostosis germline 7 34055301 AAAGTATGCAAATTTGGCAACAAGATTTTCCAGGTATGTCATGAGACAAGCACATGGGAAC 1085307871 415048 NM_006772.2(SYNGAP1):c.472C>T (p.Gln158Ter) SYNGAP1 Mar 20, 2017 MedGen:CN517202 not provided germline 6 33432769 CCCAAACTTGACCGGACCAGCAGCTTTCGCCAGATCCTGCCTCGCTTCCGAAGTGCTGACC 137852756 23858 NM_001204.6(BMPR2):c.1297C>T (p.Gln433Ter) BMPR2 Oct 01, 2008 MedGen:C0152171,OMIM:178600,SNOMED CT:26174007;MedGen:C2750262 Primary pulmonary hypertension;Pulmonary hypertension, primary, 1, with hereditary hemorrhagic telangiectasia germline 2 202542331 AAATCCACAGGGGAATCCGTACCAGAGTACCAGATGGCTTTTCAGACAGAGGTTGGAAACC 28939714 21058 NM_004551.2(NDUFS3):c.434C>T (p.Thr145Ile) NDUFS3 Jan 01, 2004 MedGen:C1838951 Leigh syndrome due to mitochondrial complex I deficiency germline 11 47582140 TGCGCTTCAACTCACGGATCCGTGTGAAGACCTACACAGATGAGCTGACGCCCATTGAGTC 387906630 38665 NM_001145661.1(GATA2):c.761C>T (p.Pro254Leu) GATA2 Sep 08, 2011 MedGen:C3280030,OMIM:614172,Orphanet:ORPHA228423 Dendritic cell, monocyte, B lymphocyte, and natural killer lymphocyte deficiency germline 3 128485837 ACCCCATCCCCACCTACCCCTCCTATGTGCCGGCGGCTGCCCACGACTACAGCAGCGGACT 376076886 264005 NM_016343.3(CENPF):c.7219C>T (p.Arg2407Ter) CENPF Sep 08, 2016 MedGen:CN517202 not provided germline 1 214646789 CTGACAAATGAATTACAAAAAGAGCAAGAGCGAATATCTGAATTAGAAATAATAAATTCAT 746217361 224662 NM_004425.3(ECM1):c.727C>T (p.Arg243Ter) ECM1 Nov 19, 2015 MedGen:C0023795,OMIM:247100,Orphanet:ORPHA530,SNOMED CT:38692000 Lipid proteinosis germline 1 150511475 CTCTTGCTCTAGTGGGAGGAAGCAATGAGCCGATTCTGTGAGGCCGAGTTCTCGGTCAAGA 587777062 79343 NM_030632.2(ASXL3):c.1396C>T (p.Gln466Ter) ASXL3 Feb 05, 2013 MedGen:C3809650,OMIM:615485,Orphanet:ORPHA352577 Bainbridge-Ropers syndrome germline 18 33738800 GAAGAGGTAGAGACTAGTATCTGTGAATGCCAGGATGAAAATCATAAGACAATACCTGAAT 587783037 166249 NM_000057.3(BLM):c.3415C>T (p.Arg1139Ter) BLM Jul 21, 2016 MedGen:C0005859,OMIM:210900,Orphanet:ORPHA125,SNOMED CT:4434006 Bloom syndrome germline 15 90803577 GGTATATTTGGAAAAGGATCTGCTTATTCACGACACAATGCCGAAAGACTTTTTAAAAAGC 63751017 94786 NM_000179.2(MSH6):c.2731C>T (p.Arg911Ter) MSH6 Oct 03, 2017 Human Phenotype Ontology:HP:0012114,MedGen:C0476089,OMIM:608089,SNOMED CT:254878006;MedGen:C0027672,SNOMED CT:699346009;MedGen:C0009405,Orphanet:ORPHA443090;MedGen:C1833477,OMIM:614350;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:CN517202 Endometrial carcinoma;Hereditary cancer-predisposing syndrome;Hereditary nonpolyposis colon cancer;Hereditary nonpolyposis colorectal cancer type 5;Lynch syndrome;not provided germline;unknown 2 47800714 CGTTTTCCTGATTTGACTGTAGAATTGAACCGATGGGATACAGCCTTTGACCATGAAAAGG 1057524203 368694 NM_001723.5(DST):c.7543C>T (p.Gln2515Ter) DST Dec 13, 2016 MedGen:CN517202 not provided germline 6 56615924 CATAGAGGCCTGGTTGATGAGGGGTTTGCCCAGCAGCTGCGACAGTGTGAATTAGTAATCA -1 447368 NM_000530.7(MPZ):c.256C>T (p.Gln86Ter) MPZ Jul 11, 2017 MedGen:C0751036,Orphanet:ORPHA65753,SNOMED CT:398040009 Charcot-Marie-Tooth disease, type I germline 1 161306900 TCCTCATAGATCTTCCACTATGCCAAGGGACAACCCTACATTGACGAGGTGGGGACCTTCA 775104326 259764 NM_001904.3(CTNNB1):c.283C>T (p.Arg95Ter) CTNNB1 Jul 08, 2016 MedGen:C3554449,OMIM:615075,Orphanet:ORPHA404473;MedGen:CN517202 Mental retardation, autosomal dominant 19;not provided de novo;germline 3 41224995 CAGTATGCAATGACTCGAGCTCAGAGGGTACGAGCTGCTATGTTCCCTGAGACATTAGATG 724159962 171921 NM_032228.5(FAR1):c.787C>T (p.Arg263Ter) FAR1 Nov 06, 2014 MedGen:C4015344,OMIM:616154,Orphanet:ORPHA438178 Peroxisomal fatty acyl-coa reductase 1 disorder germline 11 13711946 ATTTCAACAAAGGCAGGGAAAGGAATTCTTCGAACAATACGTGCCTCCAACAATGCCCTTG 387907174 40308 NM_000428.2(LTBP2):c.4855C>T (p.Gln1619Ter) LTBP2 Jan 01, 2011 MedGen:C1562061,OMIM:251750,SNOMED CT:416671000 Microspherophakia germline 14 74503252 TGCTGCTGCCAGGACGGCGAGGCCTGGAGCCAGCAGTGTGCTCTGTGTCCCCCGAGGAGCT 80359170 67430 NM_000059.3(BRCA2):c.9148C>T (p.Gln3050Ter) BRCA2 Sep 08, 2016 MedGen:C2675520,OMIM:612555;MedGen:CN517202 Breast-ovarian cancer, familial 2;not provided germline;unknown 13 32380037 GTTTCAGATGAAATTTTATTTCAGATTTACCAGCCACGGGAGCCCCTTCACTTCAGCAAAT 121434377 17324 NM_015046.5(SETX):c.2602C>T (p.Gln868Ter) SETX Mar 01, 2004 MedGen:C1853761,OMIM:606002 Spinocerebellar ataxia autosomal recessive 1 germline 9 132328996 TCTCAAAACAATGTATTGCCAAAAGAGAAACAATTAAAGAATGAAGAATTAGTTATTTTCT 281875189 38972 NM_003070.4(SMARCA2):c.3602C>T (p.Ala1201Val) SMARCA2 May 10, 2016 MedGen:C1303073,OMIM:601358,Orphanet:ORPHA3051,SNOMED CT:401046009;MedGen:CN517202 Nicolaides-Baraitser syndrome;not provided germline 9 2115967 AGCTGAACGTGGATCAGAAAGTGATCCAGGCGGGCATGTTTGACCAAAAGTCTTCAAGCCA 28941774 18791 NM_000375.2(UROS):c.197C>T (p.Ala66Val) UROS Sep 12, 2013 MedGen:C0162530,OMIM:263700,Orphanet:ORPHA79277 Congenital erythropoietic porphyria germline 10 125815081 ACGGGGGACTCATTTTTACCAGCCCCAGAGCAGTGGAAGCAGCAGAGTTATGTTTGGAGCA 312262801 49690 NM_024408.3(NOTCH2):c.6007C>T (p.Arg2003Ter) NOTCH2 Sep 06, 2016 MedGen:C1857761,OMIM:610205,Orphanet:ORPHA261629;MedGen:C0917715,OMIM:102500,SNOMED CT:63122002 Alagille syndrome 2;Hajdu-Cheney syndrome germline 1 119917685 ACTCTTTTGTTGTTGAAAAATGGGGCCAACCGAGACATGCAGGACAACAAGGTACAGTTTG 63750687 125778 NM_000021.3(PSEN1):c.1141C>T (p.Leu381Phe) PSEN1 Jan 01, 2014 MedGen:C4015782 Alzheimer disease familial 3, with spastic paraparesis germline 14 73217137 TGTAACCTTTCCTTTTTAGGGGGAGTAAAACTTGGATTGGGAGATTTCATTTTCTACAGTG 724159969 172080 NM_001142415.1(AIMP1):c.115C>T (p.Gln39Ter) AIMP1 Aug 01, 2014 MedGen:C1850053,OMIM:260600,Orphanet:ORPHA280293 Leukodystrophy, hypomyelinating 3 germline 4 106327456 TTTAACTGGATGTTCTTGATCCTAGTTTTGCAGGCAACTTTGAGGGAAGAGAAGAAACTTC 28933693 24476 NM_000023.3(SGCA):c.229C>T (p.Arg77Cys) SGCA Jul 17, 2017 MedGen:C2936332,OMIM:608099,Orphanet:ORPHA62;MedGen:CN517202 Limb-girdle muscular dystrophy, type 2D;not provided germline;unknown 17 50167653 CAGGGACACCCAGACCTGCCCCGGTGGCTCCGCTACACCCAGCGCAGCCCCCACCACCCTG 548728088 166403 NM_022082.3(SLC17A9):c.25C>T (p.Arg9Cys) SLC17A9 Oct 01, 2014 MedGen:C4015128,OMIM:616063 Porokeratosis 8, disseminated superficial actinic type germline 20 62952855 AGCCCGATGCAGCCACCCCCAGACGAGGCCCGCAGGGACATGGCCGGGGACACCCAGTGGT 121918109 28410 NM_001042465.2(PSAP):c.1297C>T (p.Gln433Ter) PSAP Jul 01, 2005 MedGen:C1864651,OMIM:610539,Orphanet:ORPHA309252 Gaucher disease, atypical, due to saposin C deficiency germline 10 71819527 GATCGCAACCTGGAGAAAAACAGCACCAAGCAGGAGATCCTGGCTGCTCTTGAGAAAGGCT 727504936 173511 NM_194248.2(OTOF):c.2818C>T (p.Gln940Ter) OTOF Jan 30, 2014 MedGen:CN043648,Orphanet:ORPHA87884 Nonsyndromic hearing loss and deafness germline 2 26476176 CCCTGTGGCTTCCAGGAGGTCAAGGCAGCCCAGGGCCTGGGCCTGCATGCCTTCCCACCCG 879255667 247665 NM_144997.5(FLCN):c.853C>T (p.Gln285Ter) FLCN Nov 28, 2016 MedGen:C0346010,OMIM:135150,Orphanet:ORPHA122,SNOMED CT:110985001 Multiple fibrofolliculomas germline 17 17221555 GAAGGTGCTCCGACCGAGGATACCTTGGTCCAGATGGAGAAGCTCGCTGGTGAGGCAGGGG 869312707 225881 NM_015335.4(MED13L):c.6485C>T (p.Thr2162Met) MED13L Dec 10, 2015 MedGen:C4225208,OMIM:616789,Orphanet:ORPHA369891 Mental retardation and distinctive facial features with or without cardiac defects de novo 12 115963422 GGGTTCCACACCCTCTTGACTCCAAAACCACGTCGGATGTTTTAAGGTAGATACCAACCTA 199476202 47858 NM_207352.3(CYP4V2):c.1187C>T (p.Pro396Leu) CYP4V2 Apr 12, 2012 MedGen:C1859486,OMIM:210370,Orphanet:ORPHA41751 Bietti crystalline corneoretinal dystrophy not provided 4 186208961 AGGAGACCCTTCGCCTTTTTCCTTCTGTTCCTTTATTTGCCCGTAGTGTTAGTGAAGATTG 753376100 361064 NM_153638.3(PANK2):c.1069C>T (p.Arg357Trp) PANK2 Apr 01, 2015 Human Phenotype Ontology:HP:0002180,MedGen:C0027746 Neurodegeneration unknown 20 3910664 TTATACATTGACTCAGTCGGATTCAATGGACGGTCACAGTGCTATTACTTTGAAAACCCTG 375424292 270639 NM_003235.4(TG):c.6379C>T (p.Arg2127Ter) TG Mar 01, 2016 MedGen:C0342194,OMIM:274700,SNOMED CT:23536000 Iodotyrosyl coupling defect germline 8 133012017 ACTGCTGCCACCAGCAATTTCTCTGCTGTCCGAGACCTCTGTTTGTCGGGTAAGGGGAGTT 137854592 25968 NM_000397.3(CYBB):c.676C>T (p.Arg226Ter) CYBB Jun 09, 2017 MedGen:C1844376,OMIM:306400;MedGen:CN517202 Chronic granulomatous disease, X-linked;not provided germline;maternal;unknown X 37798956 AATGATCTGGACTTACATTTTTCACCCAGACGAATTGTACGTGGGCAGACCGCAGAGAGTT 727503860 176991 NM_017780.3(CHD7):c.1090C>T (p.Gln364Ter) CHD7 Feb 18, 2014 MedGen:C0265354,OMIM:214800,Orphanet:ORPHA138,SNOMED CT:47535005 CHARGE association germline 8 60742522 CCATCAAACAGTGGTCAAGGACTAATGCACCAGCAGCCCATCCACCCCAGTGGCTCACTTA 587783016 166166 NM_025114.3(CEP290):c.3904C>T (p.Gln1302Ter) CEP290 Feb 23, 2015 MedGen:C1857780,OMIM:610188;MedGen:C1857821,OMIM:611755 Joubert syndrome 5;Leber congenital amaurosis 10 unknown 12 88089157 CAACTACAAAATGACAAACTTAAGATAATGCAAGAAATGAAAAATTCTCAACAAGAACATA 758081262 397861 NM_000051.3(ATM):c.2554C>T (p.Gln852Ter) ATM Oct 12, 2016 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005 Ataxia-telangiectasia syndrome germline 11 108267258 ACTAATGGAAATCTAATGGAGGTGGAGGATCAGTCATCCATGAATCTATTTAACGATTACC 869312994 226860 NM_000048.3(ASL):c.1360C>T (p.Gln454Ter) ASL - MedGen:C0268547,OMIM:207900,Orphanet:ORPHA23,SNOMED CT:41013004 Argininosuccinate lyase deficiency germline 7 66092877 GCGCGCTCCAGCGTCGACTGGCAGATCCGCCAGGTGCGGGCGCTACTGCAGGCACAGCAGG 587777683 153865 NM_019105.6(TNXB):c.9764C>T (p.Thr3255Ile) TNXB Jul 01, 2013 MedGen:C4014831,OMIM:615963 Vesicoureteral reflux 8 germline 6 32048638 CTGCTCTGCTCTTTTCAGCGCCCCTGCCCACACCACTGCCGGTGGAGCCCCGCCTGGGGGA 137852595 24891 NM_000044.4(AR):c.2137C>T (p.Leu713Phe) AR Nov 01, 1997 MedGen:C0039585,OMIM:300068,SNOMED CT:12313004 Androgen resistance syndrome germline X 67711653 TCTAGCCTCAATGAACTGGGAGAGAGACAGCTTGTACACGTGGTCAAGTGGGCCAAGGCCT 121907950 18994 NM_000062.2(SERPING1):c.1394C>T (p.Ala465Val) SERPING1 Mar 01, 1995 MedGen:CN068781 Complement component 4, partial deficiency of, due to dysfunctional c1 inhibitor germline 11 57614472 AGGCGGCTGCAGCCTCCGCCATCTCTGTGGCCCGCACCCTGCTGGTCTTTGAAGTGCAGCA 74315285 19420 NM_057176.2(BSND):c.22C>T (p.Arg8Trp) BSND Nov 01, 2001 MedGen:C1865270,OMIM:602522 Bartter syndrome type 4 germline 1 54999208 CAGGCAGCCATGGCTGACGAGAAGACCTTCCGGATCGGCTTCATTGTGCTGGGGCTTTTCC 1131692255 424410 NM_003901.3(SGPL1):c.664C>T (p.Arg222Trp) SGPL1 Jul 21, 2017 MedGen:CN339707,OMIM:617575 NEPHROTIC SYNDROME 14 germline 10 70868393 GAAAGCATACTGATGGCCTGCAAAGCATATCGGGATCTGGCCTTTGAGAAGGGGATCAAAA 35859650 33311 NM_000036.2(AMPD1):c.1261C>T (p.Arg421Trp) AMPD1 Jul 07, 2017 MedGen:C0268123,OMIM:615511,SNOMED CT:9105005;MedGen:CN517202 Muscle AMP deaminase deficiency;not provided germline 1 114677972 AAATATAATCCTGTAGGAGCAAGTGAGCTACGGGACCTCTACTTGAAGACAGACAATTACA 779575307 433672 NM_006726.4(LRBA):c.2479C>T (p.Arg827Ter) LRBA Jan 07, 2017 MedGen:CN169374 not specified germline 4 150868276 GAGATACTAAAAGTAATTGCGACCCTACTTCGAAATTCTCCCCAGTGCCCAGAGAGCATGG 387906597 38570 NM_001202.5(BMP4):c.592C>T (p.Arg198Ter) BMP4 Oct 01, 2011 MedGen:C1864689,OMIM:607932,Orphanet:ORPHA139471;MedGen:C2677434,OMIM:600625 Microphthalmia syndromic 6;Orofacial cleft 11 germline 14 53950667 GCAGAAGTGGTGCCTGGGCACCTCATCACACGACTACTGGACACGAGACTGGTCCACCACA 886039506 259914 NM_000118.3(ENG):c.277C>T (p.Arg93Ter) ENG Jul 11, 2017 MedGen:C0039445,OMIM:187300,Orphanet:ORPHA774,SNOMED CT:21877004;MedGen:CN517202 Osler hemorrhagic telangiectasia syndrome;not provided germline 9 127829770 CAGGCATCCAAGCAAAATGGCACCTGGCCCCGAGAGGTGCTTCTGGTCCTCAGTGTAAACA 121908337 19771 NM_007078.2(LDB3):c.617C>T (p.Thr206Ile) LDB3 Dec 03, 2003 MedGen:C1832244,OMIM:601493 Dilated cardiomyopathy 1C germline 10 86681731 ACAACCCCATTGGCCTGTACTCGGCAGAGACCCTGAGGGAGATGGCTCAGATGTACCAGAT 104893940 17427 NM_000045.3(ARG1):c.871C>T (p.Arg291Ter) ARG1 Jun 01, 1992 MedGen:C0268548,OMIM:207800,Orphanet:ORPHA90,SNOMED CT:23501004 Arginase deficiency germline 6 131583810 TCCCTGGGGAAGACACCAGAAGAAGTAACTCGAACAGTGAACACAGCAGTTGCAATAACCT 369296618 200226 NM_052845.3(MMAB):c.700C>T (p.Gln234Ter) MMAB Oct 10, 2016 MedGen:C1855102,OMIM:251110,Orphanet:ORPHA79311;MedGen:CN517202 Methylmalonic aciduria cblB type;not provided germline 12 109557081 GCCAGATATGCAGCCATGAAGGAGGGGAATCAAGAGAAAATATACATGAAAAATGACCCAT 281865112 39634 NM_024747.5(HPS6):c.1234C>T (p.Gln412Ter) HPS6 Dec 01, 2009 MedGen:C3888007,OMIM:614075 Hermansky-Pudlak syndrome 6 germline 10 102066708 CTGGTGTTTGAGGAGGCCTGCGGGTACTACCAGCGGCGGAGCCTGCGGGGTGCCCAGCTCA 796053138 405354 NM_021007.2(SCN2A):c.4303C>T (p.Arg1435Ter) SCN2A Jan 01, 2018 MedGen:C3150987,OMIM:613721;MedGen:CN517202 Early infantile epileptic encephalopathy 11;not provided germline;unknown 2 165377645 ATGGATATTATGTATGCAGCTGTTGATTCACGAAATGTAAGTCTAGTTAGAGGGAAATTGT 1057519732 362860 NM_002755.3(MAP2K1):c.370C>T (p.Pro124Ser) MAP2K1 Dec 28, 2016 MeSH:D015179,MedGen:CN236642;Human Phenotype Ontology:HP:0002861,MeSH:D008545,MedGen:C0025202,SNOMED CT:2092003;MeSH:C562393,MedGen:C0151779,SNOMED CT:93655004;MedGen:C0153574,Orphanet:ORPHA213569;Human Phenotype Ontology:HP:0006740,MedGen:C0279680;MedGen:CN517202 Colorectal Neoplasms;Malignant melanoma;Malignant melanoma of skin;Malignant neoplasm of body of uterus;Transitional cell carcinoma of the bladder;not provided germline;somatic 15 66436824 GAGCTGCAGGTTCTGCATGAGTGCAACTCTCCGTACATCGTGGGCTTCTATGGTGCGTTCT 397515506 76423 m.14568C>T MT-ND6 Sep 19, 2013 Human Phenotype Ontology:HP:0001112,MedGen:C0917796,OMIM:535000,Orphanet:ORPHA104,SNOMED CT:58610003 Leber's optic atrophy not provided MT 14568 AATTCAGAATAATAACACACCCGACCACACCGCTAACAATCAATACTAAACCCCCATAAAT 397514383 36376 NM_000060.4(BTD):c.757C>T (p.Pro253Ser) BTD Dec 04, 2012 MedGen:C0220754,OMIM:253260,Orphanet:ORPHA79241,SNOMED CT:8808004 Biotinidase deficiency not provided 3 15644613 TTCACATGCTTTGATATATTGTTCTTTGACCCTGCCATCAGAGTCCTCAGAGACTACAAGG 199422293 47707 NM_198253.2(TERT):c.1456C>T (p.Arg486Cys) TERT May 10, 2012 MedGen:C1800706,OMIM:178500,Orphanet:ORPHA79126,SNOMED CT:28168000 Idiopathic fibrosing alveolitis, chronic form not provided 5 1293430 GGCCTCTGGGGCTCCAGGCACAACGAACGCCGCTTCCTCAGGAACACCAAGAAGTTCATCT 397518413 94253 NM_005359.5(SMAD4):c.1486C>T (p.Arg496Cys) SMAD4 Aug 23, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0345893,OMIM:174900,Orphanet:ORPHA329971,SNOMED CT:9273005;MedGen:C0796081,OMIM:139210,Orphanet:ORPHA2588;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Juvenile polyposis syndrome;Myhre syndrome;not provided germline;unknown 18 51078294 GCTGCTGCTGGAATTGGTGTTGATGACCTTCGTCGCTTATGCATACTCAGGATGAGTTTTG 79633941 22243 NM_000492.3(CFTR):c.2668C>T (p.Gln890Ter) CFTR Jun 07, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008;MedGen:CN517202 Cystic fibrosis;not provided germline;unknown 7 117603542 ATTTCCTATTTGCTTTACAGCACTCCTCTTCAAGACAAAGGGAATAGTACTCATAGTAGAA 1057524732 367380 NM_032682.5(FOXP1):c.574C>T (p.Gln192Ter) FOXP1 Feb 03, 2017 MedGen:CN517202 not provided germline 3 71047032 CAGCAGCAGCTTTTACAGATGCAGCAGTTACAGCAGCAGCACCTCCTGTCTTTGCAGCGCC 61750071 106206 NM_000552.4(VWF):c.4120C>T (p.Arg1374Cys) VWF Feb 16, 2017 MedGen:CN517202 not provided germline 12 6019298 ACACTGTTCCAAATCTTCAGCAAGATCGACCGCCCTGAAGCCTCCCGCATCACCCTGCTCC 121434444 21848 NM_004984.3(KIF5A):c.1082C>T (p.Ala361Val) KIF5A Feb 01, 2006 MedGen:C1858712,OMIM:604187,Orphanet:ORPHA100991 Spastic paraplegia 10 germline 12 57569648 AGAAGACAAAGGCCCAGAAGGAGACGATTGCGAAGCTGGAGGCTGAGCTGAGCCGGTGGCG 762250680 243799 NM_004006.2(DMD):c.4870C>T (p.Gln1624Ter) DMD May 18, 2016 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Duchenne muscular dystrophy germline X 32365175 TCACAGGCTACTCAAAAAGAGATTGAGAAACAGAAGGTGCACCTGAAGAGTATCACAGAGG 1060500053 403123 NM_000891.2(KCNJ2):c.682C>T (p.Arg228Ter) KCNJ2 May 12, 2017 MedGen:C1563715,OMIM:170390,Orphanet:ORPHA37553,SNOMED CT:422348008 Andersen Tawil syndrome germline 17 70175721 CGGAAAAGCCACTTGGTGGAAGCTCATGTTCGAGCACAGCTCCTCAAATCCAGAATTACTT 121908278 28429 NM_000207.2(INS):c.16C>T (p.Arg6Cys) INS Apr 01, 2008 MedGen:C3150617,OMIM:613370 Maturity-onset diabetes of the young, type 10 germline 11 2160956 CACTGTCCTTCTGCCATGGCCCTGTGGATGCGCCTCCTGCCCCTGCTGGCGCTGCTGGCCC 201038679 186891 NM_000053.3(ATP7B):c.2975C>T (p.Pro992Leu) ATP7B Dec 27, 2015 MedGen:C0019202,OMIM:277900,Orphanet:ORPHA905,SNOMED CT:88518009;MedGen:CN517202 Wilson disease;not provided germline;unknown 13 51946369 CCTGCCCCTGCTCCCTGGGGCTGGCCACGCCCACGGCTGTCATGGTGGGCACCGGGGTGGC 104894789 471457 NM_004006.2(DMD):c.9928C>T (p.Gln3310Ter) DMD Jul 11, 2017 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Duchenne muscular dystrophy germline X 31182784 AGAGTGGCTGCTGCAGAAACTGCCAAGCATCAGGCCAAATGTAACATCTGCAAAGAGTGTC 397518481 94341 NM_000965.4(RARB):c.355C>T (p.Arg119Ter) RARB Oct 03, 2013 MedGen:C3809803,OMIM:615524 Microphthalmia, syndromic 12 germline 3 25501230 ATTCAGAAGAATATGATTTACACTTGTCACCGAGATAAGAACTGTGTTATTAATAAAGTCA 138149179 47475 NM_000282.3(PCCA):c.937C>T (p.Arg313Ter) PCCA Jul 03, 2013 Human Phenotype Ontology:HP:0003353,MedGen:C0268579,OMIM:606054,Orphanet:ORPHA35 Propionic acidemia germline 13 100273218 ATATGTAGCATTTTTTTGGATGCGGAGACTCGAAGAGCGATGGGAGAACAAGCTGTAGCTC 202128397 178865 NM_173689.6(CRB2):c.1882C>T (p.Arg628Cys) CRB2 Jan 08, 2015 MedGen:C4015555,OMIM:616220 Focal segmental glomerulosclerosis 9 germline 9 123370935 GGGTCCTGTGTGGATCTGTGGACTCATTTCCGTTGCGACTGTGCCCGGCCCCATAGAGGTC 121908082 19081 NM_000547.5(TPO):c.1618C>T (p.Arg540Ter) TPO Jun 01, 1996 MedGen:C1291299,OMIM:274500,SNOMED CT:124204003 Deficiency of iodide peroxidase germline 2 1487841 TATTTTCCAGGTGGTTTGGACCCACTAATACGAGGCCTTCTTGCAAGACCAGCCAAACTGC 730881633 180947 NM_032043.2(BRIP1):c.1066C>T (p.Arg356Ter) BRIP1 Jun 26, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline 17 61801327 AAACTAAAGGCCTGTCCATATTACACAGCCCGAGAACTAATACAAGATGCTGACATCATAT 137853141 20755 NM_006424.2(SLC34A2):c.226C>T (p.Gln76Ter) SLC34A2 Oct 01, 2006 MedGen:C0155912,OMIM:265100,Orphanet:ORPHA60025,SNOMED CT:87153008 PULMONARY ALVEOLAR MICROLITHIASIS germline 4 25662818 GTGGATGACCCCTGGAACCTACCCACTCTTCAGGACTCGGGGATCAAGTGGTCAGGTAAAA 45517258 27443 NM_000548.4(TSC2):c.2713C>T (p.Arg905Trp) TSC2 Feb 16, 2017 MedGen:C1860707,OMIM:613254;MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000;MedGen:CN517202 Tuberous sclerosis 2;Tuberous sclerosis syndrome;not provided germline 16 2076141 ATGTGGTTCATCAGGTGCCGCCTGCCCTTCCGGAAGGATTTTGTCCCTTTCATCACTAAGG 754477154 211377 NM_175073.2(APTX):c.667C>T (p.Leu223Phe) APTX Jul 18, 2012 MedGen:CN517202 not provided germline 9 32984734 CTGAAGGCTGTGGCCAGGGAACACCTTGAACTCCTTAAGCATATGCACACTGTGGGGGAAA 398123014 49928 NM_020944.2(GBA2):c.1018C>T (p.Arg340Ter) GBA2 Apr 04, 2013 MedGen:C2828721,OMIM:614409,Orphanet:ORPHA320391 Spastic paraplegia 46, autosomal recessive germline 9 35740833 CCAAACCCCTACACGATGGCTGTGGCTGCACGAGTCACGGTAAGGAAAGAGCCTGCCCTAT 80358200 23760 NM_005267.4(GJA8):c.262C>T (p.Pro88Ser) GJA8 Mar 01, 1998 MedGen:C1861828,OMIM:116200 Cataract 1 germline 1 147908217 TGGGTGCTGCAGATCATCTTCGTCTCCACCCCGTCCCTGATGTACGTGGGGCACGCGGTGC 72653791 426941 NM_001171.5(ABCC6):c.2342C>T (p.Ala781Val) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16178871 CAGCTGTGTACCTGCTGGATGACCCCCTGGCGGCCCTGGATGCCCACGTTGGCCAGCATGT 121908766 22215 NM_000492.3(CFTR):c.3712C>T (p.Gln1238Ter) CFTR Dec 08, 2016 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline;unknown 7 117627765 GAGAACATTTCCTTCTCAATAAGTCCTGGCCAGAGGGTGAGATTTGAACACTGCTTGCTTT 121434573 31610 NM_000123.3(ERCC5):c.526C>T (p.Gln176Ter) ERCC5 Mar 01, 2001 MedGen:C1968561 Xeroderma pigmentosum group g/Cockayne syndrome germline 13 102856110 CAAGAAAGAATGAATCAAAAACAAGCATTACAGGTATTTAGATCATTTTTGAATTCAGAAT 397516005 51860 NM_000256.3(MYBPC3):c.3181C>T (p.Gln1061Ter) MYBPC3 Dec 08, 2015 MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Primary familial hypertrophic cardiomyopathy;not provided germline 11 47333566 AACATGGAGGACAAGGCCACGCTGGTGCTGCAGGTTGTTGGTGCGTGGCCAAGGCCTCCTT 797045769 207239 NM_133433.3(NIPBL):c.5044C>T (p.Arg1682Ter) NIPBL Apr 29, 2015 MedGen:CN029798,OMIM:122470 Cornelia de Lange syndrome 1 germline 5 37020492 TCTCGTAAATTCTATATAGCCCAGTGGTTTCGAGACACAACTCTGGAAACAGAAAAAGCAA 1064793717 410584 NM_000540.2(RYR1):c.4672C>T (p.Gln1558Ter) RYR1 Jun 09, 2015 MedGen:CN517202 not provided germline 19 38483078 TTTCCTGCCGTCTTCGTCCTGCCCACCCACCAGAACGTCATCCAGTTTGAGCTGGGGAAGC 104894740 26232 NM_139058.2(ARX):c.1117C>T (p.Gln373Ter) ARX Nov 01, 2002 MedGen:C1846171,OMIM:300215,Orphanet:ORPHA452 Lissencephaly 2, X-linked germline X 25010262 ATGAGGCTGGACTTGACCGAGGCCCGAGTCCAGGTGAGCTGCACAACAGAGGGAAGAGGGA 137852356 25127 NM_000132.3(F8):c.6403C>T (p.Arg2135Ter) F8 Nov 27, 1986 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154896103 AGTCTTGATGGGAAGAAGTGGCAGACTTATCGAGGAAATTCCACTGGAACCTTAATGGTAT 1085307131 413918 NM_031296.2(RAB33B):c.490C>T (p.Gln164Ter) RAB33B May 09, 2017 MedGen:C3714896,OMIM:615222 Smith-McCort dysplasia 2 germline 4 139472926 AGTGCCATACAGGTACCCACAGACTTGGCACAAAAATTTGCTGACACACACAGTATGCCTT 74315497 18330 NM_000268.3(NF2):c.958C>T (p.Gln320Ter) NF2 Aug 01, 1994 MedGen:C0027832,OMIM:101000,Orphanet:ORPHA637,SNOMED CT:92503002 Neurofibromatosis, type 2 germline 22 29668405 AGAAGGAAAGCCGATTCTTTGGAAGTTCAGCAGATGAAAGCCCAGGCCAGGGAGGAGAAGG 1057520750 367333 NM_003722.4(TP63):c.547C>T (p.Gln183Ter) TP63 May 22, 2015 MedGen:CN517202 not provided germline 3 189808494 GGCCCGCACAGTTTCGACGTGTCCTTCCAGCAGTCGAGCACCGCCAAGTCGGCCACCTGGA -1 434903 NM_001009944.2(PKD1):c.8704C>T (p.Gln2902Ter) PKD1 Aug 02, 2016 MedGen:C0085413,OMIM:173900,SNOMED CT:28728008;MedGen:CN517202 Polycystic kidney disease, adult type;not provided germline;unknown 16 2103353 AACTCCGCCAACTCCGTTGTGGTCCAGCCCCAGGCCTCCGTCGGTGCTGTGGTCACCCTGG 104894562 23796 NM_003593.2(FOXN1):c.763C>T (p.Arg255Ter) FOXN1 Jun 01, 2011 MedGen:C1866426,OMIM:601705,Orphanet:ORPHA169095 T-cell immunodeficiency, congenital alopecia and nail dystrophy germline 17 28529157 TACCTGGGCTCCTCACACTATCAGTACCAGCGAATGGCACCCCAGGCCAGCACCGATGGGC 267606740 18691 NM_015386.2(COG4):c.2197C>T (p.Arg733Trp) COG4 Sep 01, 2009 MedGen:C3150736,OMIM:613489,Orphanet:ORPHA263501 Congenital disorder of glycosylation type 2J germline 16 70481397 ACCACCTGGACCATCCGAGACAAGTTTGCCCGGCTCTCCCAGATGGCCACCATCCTCAATC 886044003 273012 NM_001029883.2(C2orf71):c.1828C>T (p.Gln610Ter) C2orf71 Jul 12, 2016 MedGen:C3150691,OMIM:613428 Retinitis pigmentosa 54 germline 2 29072434 CTCCAGAGTCACGTGGAGGACCCCACCTTTCAGGAGCTGCGAAGGGTCCAGAGGGACCTCA 886041354 264564 NM_001360.2(DHCR7):c.740C>T (p.Ala247Val) DHCR7 Nov 10, 2016 MedGen:CN517202 not provided germline 11 71438970 TGTTCTTCAATGGGCGCCCCGGGATCGTCGCCTGGACCCTCATCAACCTGTCCTTCGCAGC -1 481698 NM_000094.3(COL7A1):c.751C>T (p.Gln251Ter) COL7A1 May 08, 2017 MedGen:CN517202 not provided germline 3 48592870 TCTGAGCCAAGCAGCCAATCCTTGAGAGTACAGTGGACAGCGGCCAGTGGCCCTGTGACTG -1 429423 NM_003482.3(KMT2D):c.5269C>T (p.Arg1757Ter) KMT2D Sep 28, 2016 MedGen:CN030661,OMIM:147920 Kabuki syndrome 1 germline 12 49043918 GAAGGGGATGAGAAGAAGAAGCAACAGCGGCGAGGGCGCAAGAAGAGCAAACTGGAGGACA 121964863 27352 NM_001014796.1(DDR2):c.2254C>T (p.Arg752Cys) DDR2 Jun 01, 2010 MedGen:C1849011,OMIM:271665,Orphanet:ORPHA93358 Spondylometaepiphyseal dysplasia short limb-hand type germline 1 162776341 CGGATCCAGGGCCGGGCAGTGCTCCCTATCCGCTGGATGTCTTGGGAGAGTATCTTGCTGG 1057519293 361795 NM_022089.3(ATP13A2):c.1345C>T (p.Arg449Ter) ATP13A2 Feb 01, 2017 MedGen:C4310662,OMIM:617225 Spastic paraplegia 78, autosomal recessive germline 1 16996262 GGCACCATCTACAGCATCTTCATCCTCTACCGAAACCGGGTAAGCCTTGGGGGTGGGGTGG 119103290 17539 NM_000127.2(EXT1):c.1018C>T (p.Arg340Cys) EXT1 Aug 19, 2016 Human Phenotype Ontology:HP:0002762,MedGen:C0015306,OMIM:133700,SNOMED CT:254044004;MedGen:CN517202 Multiple congenital exostosis;not provided germline 8 117837146 AATGCCACTTTCTGTCTGGTTCCTCGTGGTCGCAGGCTTGGGTCCTTCAGATTCCTGGAGG 794726752 187738 NM_001165963.1(SCN1A):c.4573C>T (p.Arg1525Ter) SCN1A Jun 29, 2016 MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002;MedGen:CN517202 Severe myoclonic epilepsy in infancy;not provided de novo;germline 2 165996021 GGATCGAAAAAACCGCAAAAGCCTATACCTCGACCAGGAGTAAGAAGTATCAAATGATATG 768248216 248884 NM_177438.2(DICER1):c.832C>T (p.Leu278Phe) DICER1 Nov 10, 2014 MedGen:CN072455,OMIM:601200 DICER1-related pleuropulmonary blastoma cancer predisposition syndrome somatic 14 95126651 GAAAGACTGCTGATGGAATTAGAAGAAGCACTTAATTTTATCAATGATTGTAATATATCTG 119486096 20060 NM_004897.4(MINPP1):c.122C>T (p.Ser41Leu) MINPP1 Apr 01, 2001 Human Phenotype Ontology:HP:0006731,MedGen:C0206682,OMIM:188470 Thyroid cancer, follicular somatic 10 87505037 CTCTTCTAGAGCCGAGGGACCCGGTGGCCTCGTCGCTCAGCCCCTATTTCGGCACCAAGAC 587783975 168444 NM_133433.3(NIPBL):c.5455C>T (p.Arg1819Ter) NIPBL Feb 08, 2013 MedGen:CN029798,OMIM:122470 Cornelia de Lange syndrome 1 germline 5 37022271 TAGCTTGATATGCAACGAGGTGTTCATGGACGATTGATGGATAATTCGACTAGTGTCCGAG 760429286 445221 NM_000359.2(TGM1):c.232C>T (p.Arg78Ter) TGM1 Jul 06, 2017 MedGen:CN517202 not provided germline 14 24262121 TCCAGGGGTCGAGGGTCCAGCTCTGGCACTCGAAGACCTGGCTCCCGGGGCTCAGACTCCC 1135401736 362555 NM_001037.4(SCN1B):c.373C>T (p.Arg125Cys) SCN1B Feb 17, 2017 MedGen:CN240662,OMIM:617350 Epileptic encephalopathy, early infantile, 52 germline 19 35033664 CACTCGGGCGACTACGAGTGCCACGTCTACCGCCTGCTCTTCTTCGAAAACTACGAGCACA 587781967 151440 NM_000051.3(ATM):c.8185C>T (p.Gln2729Ter) ATM Feb 20, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0027672,SNOMED CT:699346009 Ataxia-telangiectasia syndrome;Hereditary cancer-predisposing syndrome germline;unknown 11 108335878 CGTGATGACCTGAGACAAGATGCTGTCATGCAACAGGTCTTCCAGATGTGTAATACATTAC 104894801 26747 NM_004429.4(EFNB1):c.161C>T (p.Pro54Leu) EFNB1 Oct 27, 2015 MedGen:C0220767,OMIM:304110;MedGen:CN517202 Craniofrontonasal dysplasia;not provided germline X 68838649 TCCTGAGTGGGAAGGGCTTGGTGATCTATCCGAAAATTGGAGACAAGCTGGACATCATCTG 765815516 358297 NM_002225.3(IVD):c.241C>T (p.Arg81Ter) IVD Nov 23, 2016 MedGen:C0268575,OMIM:243500,Orphanet:ORPHA33,SNOMED CT:87827003;MedGen:CN517202 Isovaleryl-CoA dehydrogenase deficiency;not provided germline;unknown 15 40407723 ATCGATCGCAGCAATGAGTTCAAGAACCTGCGAGTGAGTTGGGAGGTCCGGGCAGTCGGGG 724159953 171873 NM_001396.3(DYRK1A):c.1309C>T (p.Arg437Ter) DYRK1A Nov 17, 2016 MedGen:C3276611;Human Phenotype Ontology:HP:0000490,MedGen:C0014306;Human Phenotype Ontology:HP:0011968,MedGen:C0232466;Human Phenotype Ontology:HP:0001249,MedGen:C1843367;MedGen:C3279839,OMIM:614104,Orphanet:ORPHA464306;Human Phenotype Ontology:HP:0000252,MedGen:C0424688;Human Phenotype Ontology:HP:0001250,MedGen:C0036572;MedGen:CN517202 Absent or delayed speech development;Deeply set eye;Feeding difficulties;Intellectual disability;Mental retardation, autosomal dominant 7;Microcephaly;Seizures;not provided germline;unknown 21 37505352 CTTGGAGTGGAAACAGGAGGACCTGGTGGGCGACGTGCTGGGGAGTCAGGTCATACGGTCG 786201090 185520 NM_000455.4(STK11):c.910C>T (p.Arg304Trp) STK11 Apr 27, 2017 MedGen:C0027672,SNOMED CT:699346009;MeSH:D010580,MedGen:C0031269,OMIM:175200,Orphanet:ORPHA2869,SNOMED CT:54411001;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Peutz-Jeghers syndrome;not provided germline;somatic 19 1221996 CCGGCCAAGAGGTTCTCCATCCGGCAGATCCGGCAGCACAGGTGAGCGGCCCCTGGGGGCA 267607141 21265 NM_002420.5(TRPM1):c.31C>T (p.Gln11Ter) TRPM1 Nov 01, 2009 MedGen:C2750747,OMIM:613216 Congenital stationary night blindness, type 1C germline 15 31070213 TTTGCCTTTGTTTTCAGGTGTTGCTGTGGCCAGTTCACCAACCAGCATATCCCCCCTCTGC 745797941 233420 NM_005732.3(RAD50):c.3454C>T (p.Arg1152Ter) RAD50 Dec 14, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 5 132637179 GAAATCAATAAAATTATACGTGACCTGTGGCGAAGTACCTATCGTGGACAAGGTGAGTACC 397515479 76969 NM_006397.2(RNASEH2A):c.75C>T (p.Arg25=) RNASEH2A Nov 22, 2016 MedGen:C1835912,OMIM:610333 Aicardi Goutieres syndrome 4 germline 19 12806748 CCTGAGTTCGCCTGTGCCCGCGGTGTGCCGCAAGGAGCCTTGCGTCCTGGGCGTCGATGAG 267607063 16165 NM_015139.2(SLC35D1):c.319C>T (p.Arg107Ter) SLC35D1 Aug 01, 2009 MedGen:C0432194,OMIM:269250,Orphanet:ORPHA3144,SNOMED CT:254049009 Schneckenbecken dysplasia germline 1 67052776 AAGTTTCCTGACCTTGACAGAAATGTACCTCGAAAGGTAAAAGAAGAAAAGCGATACTTTA 367543028 51233 NM_000057.3(BLM):c.2098C>T (p.Gln700Ter) BLM Sep 07, 2017 MedGen:C0005859,OMIM:210900,Orphanet:ORPHA125,SNOMED CT:4434006;MedGen:CN517202 Bloom syndrome;not provided germline;unknown 15 90765319 CTTTCAGGAGGTGGTAAGAGTTTGTGTTACCAGCTCCCTGCCTGTGTTTCTCCTGGGGTCA 606231451 171039 NM_001114748.1(TMEM240):c.509C>T (p.Pro170Leu) TMEM240 Jun 08, 2017 MedGen:C1843891,OMIM:607454,Orphanet:ORPHA98773;MedGen:CN517202 Spinocerebellar ataxia 21;not provided germline 1 1535372 AGAAACTCTACCACAATGGCCACCCCAGCCCGCGGCACCTGTGAGCCGCACGGGGACTTAC 267607055 19139 NM_000112.3(SLC26A2):c.398C>T (p.Ala133Val) SLC26A2 Nov 15, 2008 MedGen:C0220726,OMIM:222600,Orphanet:ORPHA628,SNOMED CT:58561002 Diastrophic dysplasia germline 5 149978050 TGCCCCAGTCCATTGCTTATTCCCTGCTGGCTGGCCAAGAACCTGTCTATGGTCTGTACAC 622288 432466 NM_018116.3(MSTO1):c.971C>T (p.Thr324Ile) MSTO1 Sep 22, 2017 MedGen:CN484737,OMIM:617675 MYOPATHY, MITOCHONDRIAL, AND ATAXIA germline 1 155612848 GTGCCCATCTTGGTGTCTTCTTACAGGCCACTCTGCCCTTCCACTGCAGTGCCATCCTGGC 1085307398 414364 NM_001204.6(BMPR2):c.2626C>T (p.Q876*) BMPR2 - MedGen:C0152171,OMIM:178600,SNOMED CT:26174007 Primary pulmonary hypertension germline 2 202556291 GAGCATGAGCCTTTACTGAGACGAGAGCAACAAGCTGGCCATGATGAAGGTGTTCTGGATC 387906886 39372 NM_016219.4(MAN1B1):c.1000C>T (p.Arg334Cys) MAN1B1 Jul 15, 2011 MedGen:C3280127,OMIM:614202 Mental retardation, autosomal recessive 15 germline 9 137101088 GTGGACGTCAACCTGTTTGAGAGCACGATCCGCATCCTGGGGGGGCTCCTGAGTGCCTACC 587783295 167765 NM_018136.4(ASPM):c.9910C>T (p.Arg3304Ter) ASPM May 16, 2017 MedGen:C1837501,OMIM:608716;MedGen:CN517202 Primary autosomal recessive microcephaly 5;not provided germline 1 197090004 GGAGCAATTTCTAAAATATTTGTTTTGATCCGAAGTTGTAATCGCAGTATTCCTTGTATGG 1060502040 397312 NM_004612.3(TGFBR1):c.469C>T (p.Arg157Ter) TGFBR1 Apr 21, 2016 MedGen:CN118826,Orphanet:ORPHA91387 Thoracic aortic aneurysm and aortic dissection germline 9 99132634 ATCTGCCACAACCGCACTGTCATTCACCATCGAGTGCCAAATGAAGAGGACCCTTCATTAG 121917741 28162 NM_000537.3(REN):c.145C>T (p.Arg49Ter) REN Sep 01, 2005 Human Phenotype Ontology:HP:0008660,MedGen:C0266313,OMIM:267430,SNOMED CT:204949001 Renal dysplasia germline 1 204162117 ATGCCCTCAATCCGAGAAAGCCTGAAGGAACGAGGTGTGGACATGGCCAGGCTTGGTCCCG 121909324 23546 NM_001127221.1(CACNA1A):c.4636C>T (p.Arg1546Ter) CACNA1A Jul 13, 1999 MedGen:C1720416,OMIM:108500,Orphanet:ORPHA97,SNOMED CT:420932006 Episodic ataxia type 2 germline 19 13255217 GATTTCGCCATCAGCGCCAAGCCGCTGACCCGACACATGCCGCAGAACAAGCAGAGCTTCC 80356790 24104 NM_001876.3(CPT1A):c.1241C>T (p.Ala414Val) CPT1A Mar 07, 2013 MedGen:C0342789,OMIM:255120,SNOMED CT:238001003 Carnitine palmitoyltransferase I deficiency germline 11 68781882 ATAAGCAGTCTCTTGATGCTGTGGAGAAAGCAGCGTTCTTTGTGACGTTAGATGAAACTGA 775196743 415214 NM_000494.3(COL17A1):c.25C>T (p.Arg9Ter) COL17A1 Oct 27, 2017 MedGen:CN517202 not provided germline 10 104080649 TATGGTATGGATGTAACCAAGAAAAACAAACGAGATGGAACTGAAGTCACTGAGAGAAGTA 587780490 136119 NM_133378.4(TTN):c.5047C>T (p.Arg1683Ter) TTN Dec 23, 2013 MedGen:C1838244,OMIM:600334,Orphanet:ORPHA609 Distal myopathy Markesbery-Griggs type germline 2 178776817 GCAGCCCCAGAACTGGAGCCCCTCCATTTGCGATATGGCCAAGAGCAATGGGAAGAAGGTG 587777599 152776 NM_004697.4(PRPF4):c.944C>T (p.Pro315Leu) PRPF4 Jun 01, 2014 MedGen:C4014681,OMIM:615922 Retinitis pigmentosa 70 germline 9 113288183 TATATGTTTGGTTCCTTTCCAGTGATGAACCAGTGGCAGATATTGAAGGCCATACAGTGCG 137852215 25751 NM_001008222.2(ZDHHC9):c.448C>T (p.Pro150Ser) ZDHHC9 May 01, 2007 MedGen:C2749033,OMIM:300799 Mental retardation, X-linked, syndromic, Raymond type germline X 129823718 TACTGTTACACATGCAAGATCTTCCGGCCTCCCCGGGCCTCCCATTGCAGCATCTGTGACA 760378316 205756 NM_001145715.2(KPNA7):c.106C>T (p.Arg36Ter) KPNA7 Oct 07, 2014 Human Phenotype Ontology:HP:0001256,MedGen:C0026106 Intellectual disability, mild maternal 7 99203201 CAGCAGAGGATGGCGGTCAGTCTGGAGCTCCGAAAGGCCAAGAAAGATGAACAGACCTTAA 794727953 196159 NM_000214.2(JAG1):c.1207C>T (p.Gln403Ter) JAG1 Feb 23, 2015 MedGen:C1956125,OMIM:118450 Alagille syndrome 1 germline 20 10650274 GTTAACGGATTTAAGTGTGTGTGCCCCCCACAGTGGACTGGGAAAACGTGCCAGTTAGGTA -1 480624 NM_000660.6(TGFB1):c.133C>T (p.Arg45Cys) TGFB1 Jan 01, 2017 Human Phenotype Ontology:HP:0001298,MedGen:C1963101;MedGen:CN201623,Orphanet:ORPHA238569 Encephalopathy;Immune dysregulation-inflammatory bowel disease-arthritis-recurrent infections syndrome germline 19 41352912 ACTATCGACATGGAGCTGGTGAAGCGGAAGCGCATCGAGGCCATCCGCGGCCAGATCCTGT 75039782 22205 NM_000492.3(CFTR):c.3718-2477C>T CFTR Aug 16, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008;MedGen:C0238339,OMIM:167800,Orphanet:ORPHA676,SNOMED CT:68072000;MedGen:CN169374 Cystic fibrosis;Hereditary pancreatitis;not specified germline;unknown 7 117639961 AGTCTTCCATCTGTTGCAGTATTAAAATGGCGAGTAAGACACCCTGAAAGGAAATGTTCTA 780673293 433908 NM_002977.3(SCN9A):c.2488C>T (p.Arg830Ter) SCN9A Feb 02, 2017 MedGen:CN169374 not specified germline 2 166277336 AACATTAAACTTTATATTTGCTTTTAGCTCCGAGTCTTCAAGTTGGCAAAATCCTGGCCAA 1060501173 400601 NM_025137.3(SPG11):c.5158C>T (p.Gln1720Ter) SPG11 Nov 08, 2016 MedGen:C1858479,OMIM:604360,Orphanet:ORPHA2822 Spastic paraplegia 11, autosomal recessive germline 15 44584522 CAGGAAATGCAGACCCTAAAACACATTGAACAGTGGTCACTAAAACAAGCAAGAATTGACT 1057516633 357705 NM_017890.4(VPS13B):c.5590C>T (p.Gln1864Ter) VPS13B Apr 05, 2017 MedGen:C0265223,OMIM:216550,Orphanet:ORPHA193,SNOMED CT:56604005 Cohen syndrome germline;unknown 8 99642105 ATGGCCTTATCCAAATCGAAATCACAAGAACAGAAGAATAATGAAAAAACAGACAAGAGTT 121908165 19693 NM_006118.3(HAX1):c.256C>T (p.Arg86Ter) HAX1 Dec 01, 2008 MedGen:CN032247,OMIM:610738 Severe congenital neutropenia 3, autosomal recessive germline 1 154273538 CACGATAACTTCGGCTTTGATGACCTAGTACGAGATTTCAATAGCATCTTCAGCGATATGG 72653746 426857 NM_001171.5(ABCC6):c.3709C>T (p.Gln1237Ter) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16159508 GAGAACAGCATCGTGTCAGTGGAGCGGATGCAGGACTATGCCTGGACGCCCAAGGAGGTGA 397515556 76593 NM_005211.3(CSF1R):c.2329C>T (p.Arg777Trp) CSF1R Dec 18, 2014 Gene:8156,MedGen:C1857300,OMIM:221820 Hereditary diffuse leukoencephalopathy with spheroids germline 5 150056332 CCCTGCAGTGCTTTCCCTCAGTGCATCCACCGGGACGTGGCAGCGCGTAACGTGCTGTTGA 104886283 36081 NM_000495.4(COL4A5):c.4463C>T (p.Ser1488Phe) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108687647 AGGGAACACTTCAGGTCTATGAAGGCTTTTCTCTCCTGTATGTACAAGGAAATAAAAGAGC 121908955 21707 NM_003494.3(DYSF):c.6124C>T (p.Arg2042Cys) DYSF Apr 07, 2017 MedGen:C1850889,OMIM:253601,Orphanet:ORPHA268;MedGen:C1850808,OMIM:254130,Orphanet:ORPHA45448;MedGen:CN517202 Limb-girdle muscular dystrophy, type 2B;Miyoshi muscular dystrophy 1;not provided germline 2 71682597 TACAAGACCATGAAGTTCATCCTGTGGCGGCGTTTCCGGTGGGCCATCATCCTCTTCATCA 201356558 259626 NM_002016.1(FLG):c.10225C>T (p.Arg3409Ter) FLG Oct 26, 2017 MedGen:CN517202 not provided germline 1 152304661 GCCCATGGGCGGACCAGGACCAGCACTGGACGAAGACAAGGATCCCACCACGAGCAGGCAC 780133289 451766 NM_017849.3(TMEM127):c.469C>T (p.Gln157Ter) TMEM127 Jul 06, 2017 MedGen:C1708353,Orphanet:ORPHA29072 Hereditary Paraganglioma-Pheochromocytoma Syndromes germline 2 96254056 TCTTATTGGGCTTCTGAACTCATCTTGGCCCAGCAGCAGCAGCATAAGAAGTACCATGGAT 118203972 16050 NM_139241.3(FGD4):c.670C>T (p.Arg224Ter) FGD4 Jul 01, 2007 MedGen:C1836336,OMIM:609311,Orphanet:ORPHA99954 Charcot-Marie-Tooth disease, type 4H germline 12 32598566 CTTTTGCTTACTGAAAGAGCTTATGTCAACCGACTTGACCTCTTAGATCAGGTAAGATTTT 61750422 259881 NM_000466.2(PEX1):c.2614C>T (p.Arg872Ter) PEX1 Jan 12, 2016 MedGen:CN517202 not provided germline 7 92499808 TATCCAGAATTATTTGCAAACTTGCCCATACGACAAAGAACAGGAATACTGTTGTATGGTC 397514759 75606 NM_002295.5(RPSA):c.25C>T (p.Gln9Ter) RPSA May 24, 2013 MedGen:C1849084,OMIM:271400 Asplenia, isolated congenital germline 3 39407678 TTCACAATGTCCGGAGCCCTTGATGTCCTGCAAATGAAGGAGGAGGATGTCCTTAAGTTCC 104894078 19237 NM_018972.2(GDAP1):c.358C>T (p.Arg120Trp) GDAP1 Apr 13, 2017 MedGen:C0007959,Orphanet:ORPHA166,SNOMED CT:50548001;MedGen:C1842983,OMIM:607831,Orphanet:ORPHA101097;MedGen:C1859198,OMIM:214400,Orphanet:ORPHA99948;MedGen:CN517202 Charcot-Marie-Tooth disease;Charcot-Marie-Tooth disease type 2K;Charcot-Marie-Tooth disease, type 4A;not provided germline;paternal 8 74360184 ATGCCTGATAAAGAAAGCATGTATTACCCACGGGTACAACATTACCGAGAGCTGCTTGACT 121907923 18514 NM_000280.4(PAX6):c.202C>T (p.Pro68Ser) PAX6 Jun 01, 2003 Human Phenotype Ontology:HP:0000588,MedGen:C0155299,OMIM:120430,SNOMED CT:17541006 Coloboma of optic disc germline 11 31801716 GGCAGGTATTACGAGACTGGCTCCATCAGACCCAGGGCAATCGGTGGTAGTAAACCGAGAG 148890852 417248 NM_004773.3(ZNHIT3):c.92C>T (p.Ser31Leu) ZNHIT3 Jun 01, 2017 MedGen:C1850055,OMIM:260565,Orphanet:ORPHA2836 PEHO syndrome germline 17 36486940 CGGCCTGTGGCCTCTGTTGTTACAGCTGCTCGGTAGTCTGCTTCCGGAAGCACAAAGGTGA 863223718 209861 NM_002890.2(RASA1):c.2131C>T (p.Arg711Ter) RASA1 Aug 17, 2017 MedGen:CN517202 not provided germline 5 87376512 ATTGAACCAGGGTCCCTGCGTGTTCGAGCACGATACTCTATGGAAAAAATCATGCCAGAAG 587784118 168184 NM_022455.4(NSD1):c.4444C>T (p.Gln1482Ter) NSD1 Feb 08, 2013 MedGen:CN035106,OMIM:117550 Sotos syndrome 1 germline 5 177246743 AAACGACAGAGGCATGCTGCAGCCAAGATGCAGTGTAAAAAAGTGAAAAATGATGACTCGT 121917776 27236 NM_014000.2(VCL):c.2923C>T (p.Arg975Trp) VCL Oct 20, 2006 MedGen:C1969639,OMIM:611407;MedGen:C2750459,OMIM:613255 Dilated cardiomyopathy 1W;Familial hypertrophic cardiomyopathy 15 germline 10 74112086 CCCATTCTGGCCGCGGCTCAGTCCTTGCATCGGGAAGCTACCAAGTGGTCTAGTAAGGTAC 548065551 214822 NM_177550.4(SLC13A5):c.1280C>T (p.Ser427Leu) SLC13A5 Nov 01, 2015 MedGen:C4014621,OMIM:615905 Epileptic encephalopathy, early infantile, 25 germline 17 6690936 ATGACTGCCCTCCTGGTGCTTCCCAGGCCTCGGGGCTGTCCGTGTGGATGGGGAAGCAGAT 104894942 198554 NM_000116.4(TAZ):c.280C>T (p.Arg94Cys) TAZ Jan 06, 2014 MedGen:CN517202 not provided germline X 154413248 CTCCGCCACATCTGGAACCTGAAGTTGATGCGTTGGTGAGGAGGAATGGGCCCCTCGAAGT 886039822 260584 NM_022068.3(PIEZO2):c.4723C>T (p.Arg1575Ter) PIEZO2 Oct 12, 2016 MedGen:C4310692,OMIM:617146 Arthrogryposis, distal, with impaired proprioception and touch germline 18 10736621 GAATTAAAGAAGGAAGATGAAGAACCTCCACGAAGGTCAGCATTCCAGGTAATTATGGGGA 868044680 264817 NM_030632.2(ASXL3):c.3349C>T (p.Arg1117Ter) ASXL3 Aug 29, 2016 MedGen:C3809650,OMIM:615485,Orphanet:ORPHA352577;MedGen:CN517202 Bainbridge-Ropers syndrome;not provided germline 18 33743197 AAGGCTAAGCTCTTTGCAAAGCATCAAGCTCGAGCCCATCTCTTCCAGACCTCTAAAGAGA 118192236 34620 NM_172107.3(KCNQ2):c.1741C>T (p.Arg581Ter) KCNQ2 Mar 31, 2016 MedGen:C1852587,OMIM:121200;MedGen:CN517202 Benign familial neonatal seizures 1;not provided germline 20 63413472 TACTCAGCCGGCCACCTGGACATGCTGTCCCGAATTAAGAGCCTGCAGTCCAGGCAAGAGC -1 484101 NM_000535.6(PMS2):c.1120C>T (p.Gln374Ter) PMS2 Jun 29, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 7 5989824 GATAGTGATGTCAACAAGCTAAATGTCAGTCAGCAGCCACTGCTGGATGTTGAAGGTAAGA 121909266 23374 NM_000388.3(CASR):c.196C>T (p.Arg66Cys) CASR Jun 07, 2017 MedGen:C1809471,OMIM:145980,Orphanet:ORPHA93372,SNOMED CT:190868007;MedGen:CN517202 Hypocalciuric hypercalcemia, familial, type 1;not provided germline 3 122257091 CCACTTCTTCTTTCTTCCAGGTATAATTTCCGTGGGTTTCGCTGGTTACAGGCTATGATAT 61750200 22937 NM_000350.2(ABCA4):c.634C>T (p.Arg212Cys) ABCA4 Apr 26, 2017 MedGen:C1858806,OMIM:604116;MeSH:C535804,MedGen:C1855465,OMIM:248200;MedGen:CN517202 Cone-rod dystrophy 3;Stargardt disease 1;not provided germline 1 94098928 GACATCGCCTGCAGCGAGGCCCTCCTGGAGCGCTTCATCATCTTCAGCCAGAGACGCGGGG 104894958 24779 NM_003140.2(SRY):c.277C>T (p.Gln93Ter) SRY Jul 01, 1992 MedGen:C2748896,OMIM:400044 46,XY sex reversal, type 1 germline Y 2787327 CCCAGAATGCGAAACTCAGAGATCAGCAAGCAGCTGGGATACCAGTGGAAAATGCTTACTG 1030872147 426787 NM_001171.5(ABCC6):c.4381C>T (p.Arg1461Cys) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16150600 TGCACTGTGCTGCTCATTGCCCACCGCCTGCGCTCCGTGATGGACTGTGCCCGGTAAGGCT 137852751 23849 NM_001204.6(BMPR2):c.994C>T (p.Arg332Ter) BMPR2 May 24, 2017 MedGen:C0152171,OMIM:178600,SNOMED CT:26174007;MedGen:CN517202 Primary pulmonary hypertension;not provided germline 2 202530820 ACAGATCATTATAAACCTGCAATTTCCCATCGAGATTTAAACAGCAGAAATGTCCTAGTGA 879254534 245574 NM_000527.4(LDLR):c.460C>T (p.Gln154Ter) LDLR Mar 30, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11105366 CCGGTGCTCACCTGTGGTCCCGCCAGCTTCCAGTGCAACAGCTCCACCTGCATCCCCCAGC 863225344 214715 NM_000038.5(APC):c.3688C>T (p.Gln1230Ter) APC Oct 01, 2012 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline;unknown 5 112839282 ACACCTTCATCTAATGCCAAGAGGCAGAATCAGCTCCATCCAAGTTCTGCACAGAGTAGAA 80338713 33884 NM_000047.2(ARSE):c.1442C>T (p.Thr481Met) ARSE Nov 03, 2011 MedGen:C1844853,OMIM:302950,Orphanet:ORPHA79345 Chondrodysplasia punctata 1, X-linked recessive not provided X 2935160 GAGGAACAATGTGGAAAGTCCACTTTGTGACGCCTGTGTTCCAGCCAGAGGGAGCCGGTGC 769381688 185790 NM_005957.4(MTHFR):c.379C>T (p.His127Tyr) MTHFR - MedGen:C1856058,OMIM:236250 Homocysteinemia due to MTHFR deficiency germline 1 11801257 GTGAACTACTGTGGCCTGGAGACCATCCTGCACATGACCTGCTGCCGTCAGCGCCTGGAGG 587779769 132660 NM_001101.4(ACTB):c.209C>T (p.Pro70Leu) ACTB Apr 15, 2014 MedGen:C1855722,OMIM:243310,OMIM:608578,Orphanet:ORPHA2995 Baraitser-Winter syndrome 1 germline 7 5529315 GCAAGAGAGGCATCCTCACCCTGAAGTACCCCATCGAGCACGGCATCGTCACCAACTGGGA 397508997 69311 NM_007294.3(BRCA1):c.2683C>T (p.Gln895Ter) BRCA1 Sep 08, 2016 MedGen:C2676676,OMIM:604370;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 1;Hereditary cancer-predisposing syndrome germline 17 43092848 TTCTCTGCCCACTCTGGGTCCTTAAAGAAACAAAGTCCAAAAGTCACTTTTGAATGTGAAC 886041448 264462 NM_015335.4(MED13L):c.5278C>T (p.Arg1760Ter) MED13L Jan 13, 2016 MedGen:CN517202 not provided germline 12 115980836 ATGGCATTTTCAGTGTACTGCCAGTGCAGGCGACCACTGCCTACACAGATCCACATTAAAT 137853323 26491 NM_003639.4(IKBKG):c.184C>T (p.Arg62Ter) IKBKG Feb 04, 2016 MedGen:C0021171,OMIM:308300,Orphanet:ORPHA464,SNOMED CT:367520004;MedGen:CN517202 Incontinentia pigmenti syndrome;not provided germline X 154552186 CAGCGCTGCCTGGAGGAGAATCAAGAGCTCCGAGGTGAGGAAAGAGTCAGGGGATCCAGCC 142074233 68970 NM_007294.3(BRCA1):c.1600C>T (p.Gln534Ter) BRCA1 Sep 18, 2017 MedGen:C2676676,OMIM:604370;MedGen:CN517202 Breast-ovarian cancer, familial 1;not provided germline 17 43093931 GCAGTTCAAAAGACTCCTGAAATGATAAATCAGGGAACTAACCAAACGGAGCAGAATGGTC 797044578 188176 NM_002055.4(GFAP):c.772C>T (p.Arg258Cys) GFAP Jan 08, 2015 MedGen:C0270726,OMIM:203450,Orphanet:ORPHA58,SNOMED CT:81854007 Alexander's disease germline 17 44913277 AGCAACATGCATGAAGCCGAAGAGTGGTACCGCTCCAAGGTAGCCCTGCCTGTGGGCCAGC 587783390 168720 NM_018249.5(CDK5RAP2):c.4441C>T (p.Arg1481Ter) CDK5RAP2 Apr 30, 2013 MedGen:C1858108,OMIM:604804 Primary autosomal recessive microcephaly 3 germline;unknown 9 120409290 GCAGATAAACAGAAGGAGAATGACAAATTACGAGAGTCCCTCTCCAGGAAGACCGTGAGCC 786200999 178827 NM_002582.3(PARN):c.1148C>T (p.Ala383Val) PARN May 13, 2015 MedGen:C0265965,Orphanet:ORPHA1775,SNOMED CT:74911008;MedGen:C4225356,OMIM:616353 Dyskeratosis congenita;Dyskeratosis congenita, autosomal recessive 6 germline 16 14582225 CTGAACAACTCCACGAGGCAGGCTACGATGCCTACATCACAGGGCTGTGCTTCATCTCCAT 118203963 16148 NM_025137.3(SPG11):c.6100C>T (p.Arg2034Ter) SPG11 Jan 20, 2017 MedGen:C4225253,OMIM:616668,Orphanet:ORPHA466775;MedGen:C4225253,OMIM:616668,Orphanet:ORPHA466775;MedGen:C1858479,OMIM:604360,Orphanet:ORPHA2822;MedGen:C1858479,OMIM:604360,Orphanet:ORPHA2822;MedGen:CN517202 Charcot-Marie-Tooth disease, axonal type 2X;Charcot-Marie-Tooth disease, axonal type 2X;Spastic paraplegia 11, autosomal recessive;Spastic paraplegia 11, autosomal recessive;not provided germline 15 44573652 TTGGCCTCTCAGCAGCCTGACCGATGCAAACGAGCCCAGGCCTTCATCAGCACACAGGGCC 118203682 58105 NM_000368.4(TSC1):c.2356C>T (p.Arg786Ter) TSC1 Jun 30, 2017 Human Phenotype Ontology:HP:0009729,MedGen:C1332852;Human Phenotype Ontology:HP:0010566,MedGen:C0018552;MedGen:C0027672,SNOMED CT:699346009;Human Phenotype Ontology:HP:0001250,MedGen:C0036572;MedGen:C1854465,OMIM:191100;MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000;MedGen:CN517202 Cardiac rhabdomyoma;Hamartoma;Hereditary cancer-predisposing syndrome;Seizures;Tuberous sclerosis 1;Tuberous sclerosis syndrome;not provided germline;unknown 9 132902640 CACAGCCAGATCAGACAGCTGCAGCATGACCGAGAGGAATTCTACAACCAGAGCCAGGAAT 886040610 261312 NM_000059.3(BRCA2):c.5800C>T (p.Gln1934Ter) BRCA2 Oct 18, 2016 MedGen:C2675520,OMIM:612555 Breast-ovarian cancer, familial 2 germline 13 32340155 ATTCAGAGTGAAGAAATTTTACAACATAACCAAAATATGTCTGGATTGGAGAAAGTTTCTA 397515543 76549 NM_001876.3(CPT1A):c.1339C>T (p.Arg447Ter) CPT1A Mar 07, 2013 MedGen:C0342789,OMIM:255120,SNOMED CT:238001003 Carnitine palmitoyltransferase I deficiency not provided 11 68781784 GACAGCTACGCCAAATCTCTACTACACGGCCGATGTTACGACAGGTACCGTCCTTACCTTC 104894714 19826 NM_181882.2(PRX):c.2857C>T (p.Arg953Ter) PRX Apr 05, 2017 MedGen:CN069172;MedGen:C3540453,OMIM:614895,Orphanet:ORPHA99952;MedGen:CN043578;MedGen:CN517202 Autosomal recessive Dejerine-Sottas syndrome;Charcot-Marie-Tooth disease, demyelinating, type 4f;Charcot-Marie-Tooth disease, type IV;not provided germline 19 40395495 GTGGCTAAGGCAGAGGCTGAGGGGGCTGGGCGAGCTACCAAGCTGAAGGTATCCAAATTTG 61749384 15327 NM_000552.4(VWF):c.3916C>T (p.Arg1306Trp) VWF Nov 01, 2016 MedGen:CN517202;MedGen:C1282971,Orphanet:ORPHA166087 not provided;von Willebrand disease, type 2b germline 12 6019502 CTGAAGGCCTTTGTGGTGGACATGATGGAGCGGCTGCGCATCTCCCAGAAGTGGGTCCGCG 137852594 24889 NM_000044.4(AR):c.2667C>T (p.Ser889=) AR Nov 27, 2001 MedGen:C0039585,OMIM:300068,SNOMED CT:12313004 Androgen resistance syndrome germline X 67723745 TGACCTGCTAATCAAGTCACACATGGTGAGCGTGGACTTTCCGGAAATGATGGCAGAGATC 875989884 227923 NM_000425.4(L1CAM):c.2380C>T (p.Gln794Ter) L1CAM Apr 05, 2016 MedGen:C0265216,OMIM:307000,Orphanet:ORPHA2182,SNOMED CT:71779008 X-linked hydrocephalus syndrome maternal X 153866700 TATGAGATCAAAGTCCAGGCCGTCAACAGCCAGGGCAAGGGACCAGAGCCCCAGGTCACTA 281864929 46999 NM_133378.4(TTN):c.100186C>T (p.Gln33396Ter) TTN Aug 23, 2012 MedGen:C1838244,OMIM:600334,Orphanet:ORPHA609 Distal myopathy Markesbery-Griggs type not provided 2 178527098 ACAACCCTGATCATCATGGACGTACAGAAACAAGATGGTGGACTTTATACCCTGAGTTTAG 80358308 21332 NM_002335.3(LRP5):c.1330C>T (p.Arg444Cys) LRP5 Aug 01, 2005 MedGen:C4016840 Exudative vitreoretinopathy 4, digenic germline 11 68386630 GACACGGGCACGGACCGCATCGAGGTGACGCGCCTCAACGGCACCTCCCGCAAGATCCTGG 72549334 31348 NM_006894.5(FMO3):c.1474C>T (p.Arg492Trp) FMO3 Jun 14, 2016 Human Phenotype Ontology:HP:0003614,MedGen:C0342739,OMIM:602079,Orphanet:ORPHA468726,SNOMED CT:237959005 Trimethylaminuria germline 1 171117317 GCCAGAAATGCCATACTGACCCAGTGGGACCGGTCGTTGAAACCCATGCAGACACGAGTGG 1057519430 362169 NM_001356.4(DDX3X):c.1703C>T (p.Pro568Leu) DDX3X - MedGen:C4085582,OMIM:300958,Orphanet:ORPHA457260 Mental retardation, X-linked 102 de novo X 41346946 ATCTTCTTGTTGAAGCTAAACAAGAAGTGCCGTCTTGGTTAGAAAACATGGCTTATGAACA 35129734 94240 NM_016204.3(GDF2):c.997C>T (p.Arg333Trp) GDF2 Sep 05, 2013 MedGen:C3809710,OMIM:615506 Telangiectasia, hereditary hemorrhagic, type 5 germline 10 47325491 GCTGGCAGCCACTGTCAAAAGACCTCCCTGCGGGTAAACTTCGAGGACATCGGCTGGGACA 137852214 25750 NM_001008222.2(ZDHHC9):c.442C>T (p.Arg148Trp) ZDHHC9 May 01, 2007 MedGen:C2749033,OMIM:300799 Mental retardation, X-linked, syndromic, Raymond type germline X 129823724 CTGAAATACTGTTACACATGCAAGATCTTCCGGCCTCCCCGGGCCTCCCATTGCAGCATCT 587784137 168210 NM_022455.4(NSD1):c.5098C>T (p.Arg1700Ter) NSD1 Feb 08, 2013 MedGen:CN035106,OMIM:117550 Sotos syndrome 1 germline 5 177260120 CCTAATCACTTTACCCCTAGGCGGGGCTGCCGAAATCATGAGCATGTTAATGTTAGCTGGT 121909742 31131 NM_000340.1(SLC2A2):c.1093C>T (p.Arg365Ter) SLC2A2 Jan 01, 2002 MedGen:C3495427,OMIM:227810,Orphanet:ORPHA2088,SNOMED CT:61598006 Fanconi-Bickel syndrome germline 3 170999142 TCCTAGGTATTCCTTGTGGAGAAGGCAGGGCGACGTTCTCTCTTTCTAATTGGAATGAGTG 397515895 51687 NM_000256.3(MYBPC3):c.1273C>T (p.Gln425Ter) MYBPC3 Nov 30, 2012 MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005 Primary familial hypertrophic cardiomyopathy germline 11 47343099 ATCGGTGCCAAGCGTACCCTGACCATCAGCCAGTGCTCATTGGCGGACGACGCAGCCTACC 72651614 414004 NM_000088.3(COL1A1):c.1792C>T (p.Arg598Ter) COL1A1 Jan 22, 2017 MedGen:C0023931,OMIM:166200,SNOMED CT:385482004 Osteogenesis imperfecta type I germline;paternal 17 50193023 CCACAGGGAGAGCCCGGCAAGGCTGGAGAGCGAGGTGTTCCCGGACCCCCTGGCGCTGTCG 201912053 407687 NM_175073.2(APTX):c.124C>T (p.Arg42Ter) APTX Jan 30, 2017 MedGen:CN517202 not provided germline 9 32989768 GAGACCAAGATCACTGATAAGAAATGTTCTCGACAGCAAGGTAACTGGTCATAGAAATGTG 863224973 213893 NM_001097642.2(GJB1):c.319C>T (p.Arg107Trp) GJB1 Sep 08, 2015 MedGen:C0393808,OMIM:302800,Orphanet:ORPHA101075,SNOMED CT:230552007 X-linked hereditary motor and sensory neuropathy germline X 71224026 CACCAGCAACACATAGAGAAGAAAATGCTACGGCTTGAGGGCCATGGGGACCCCCTACACC 121965031 265213 NM_000203.4(IDUA):c.1855C>T (p.Arg619Ter) IDUA Mar 22, 2016 Human Phenotype Ontology:HP:0000943,MedGen:C0086795,OMIM:607014,Orphanet:ORPHA93473 Hurler syndrome germline 4 1004286 CCAGACACAGGTGCTGTCTCTGGCTCCTACCGAGTTCGAGCCCTGGACTACTGGGCCCGAC 80357456 69765 NM_007294.3(BRCA1):c.4075C>T (p.Gln1359Ter) BRCA1 Sep 08, 2016 MedGen:C2676676,OMIM:604370 Breast-ovarian cancer, familial 1 germline 17 43091456 ACGGGCTTGGAAGAAAATAATCAAGAAGAGCAAAGCATGGATTCAAACTTAGGTATTGGAA 104893710 23386 NM_000388.3(CASR):c.2459C>T (p.Ser820Phe) CASR Jun 01, 2002 MedGen:C0342345,OMIM:601198 Hypocalcemia, autosomal dominant 1 germline 3 122284413 GCATGCTCATCTTCTTCATCGTCTGGATCTCCTTCATTCCAGCCTATGCCAGCACCTATGG 121434242 18392 NM_004698.3(PRPF3):c.1477C>T (p.Pro493Ser) PRPF3 Jan 01, 2002 MedGen:C1832378,OMIM:601414 Retinitis pigmentosa 18 germline 1 150344212 CGAGTATTAGGAACAGAAGCTGTTCAAGACCCCACGAAGGTAGAAGCCCACGTCAGAGCTC 63751615 32126 NM_000249.3(MLH1):c.676C>T (p.Arg226Ter) MLH1 Jun 27, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0009405,Orphanet:ORPHA443090;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:C1333991,OMIM:609310;MedGen:C0265325,OMIM:276300,Orphanet:ORPHA252202,SNOMED CT:61665008;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Hereditary nonpolyposis colon cancer;Lynch syndrome;Lynch syndrome II;Turcot syndrome;not provided germline;unknown 3 37012098 ATTCGCTCCATCTTTGGAAATGCTGTTAGTCGGTATGTCGATAACCTATATAAAAAAATCT 869025588 224821 NM_001039590.2(USP9X):c.2554C>T (p.Arg852Ter) USP9X Mar 01, 2016 MedGen:C4225416,OMIM:300968 Mental retardation, X-linked 99, syndromic, female-restricted germline X 41168136 TGTGCAAGACAGGAAGCTGTTCGAATGGTTCGAGTATTAACTGTTTTAAGGGAATATATAA 397517326 55091 NM_022124.5(CDH23):c.3628C>T (p.Gln1210Ter) CDH23 Sep 25, 2011 MedGen:C1832845,OMIM:601067 Usher syndrome, type 1D germline 10 71730517 GACATCAACGATGAGGCCCCCGTGTTCACACAGCAGCAGTACAGCCGTCTGGGGCTTCGAG 398123546 99398 NM_000402.4(G6PD):c.1450C>T (p.Arg484Cys) G6PD Apr 15, 2017 MedGen:C2720289,OMIM:300908,Orphanet:ORPHA466026;MedGen:C1851319,OMIM:134700;MedGen:CN517202;MedGen:CN169374 Anemia, nonspherocytic hemolytic, due to G6PD deficiency;Favism, susceptibility to;not provided;not specified germline X 154532390 GTCTTCTGCGGGAGCCAGATGCACTTCGTGCGCAGGTGAGGCCCAGCTGCCGGCCCCTGCA 121909606 31438 NM_000508.3(FGA):c.103C>T (p.Arg35Cys) FGA Dec 20, 2012 Human Phenotype Ontology:HP:0011901,MedGen:C1260903,SNOMED CT:111589005 Dysfibrinogenemia germline 4 154589514 GGTGACTTTCTAGCTGAAGGAGGAGGCGTGCGTGGCCCAAGGGTTGTGGAAAGACATCAAT 151001642 57020 NM_138691.2(TMC1):c.1165C>T (p.Arg389Ter) TMC1 Feb 19, 2016 MedGen:C1832978,OMIM:600974;MedGen:CN043648,Orphanet:ORPHA87884 Deafness, autosomal recessive 7;Nonsyndromic hearing loss and deafness germline 9 72789258 AGTGGATACCTCATCTTTTGGGCTGTGAAGCGATCCCAGGAATTTGCACAGCAAGATCCTG 72651642 271557 NM_000088.3(COL1A1):c.2089C>T (p.Arg697Ter) COL1A1 Jun 05, 2017 MedGen:C0023931,OMIM:166200,SNOMED CT:385482004;MedGen:C0268363,OMIM:166220,Orphanet:ORPHA216820,SNOMED CT:205497004;MedGen:CN517202 Osteogenesis imperfecta type I;Osteogenesis imperfecta with normal sclerae, dominant form;not provided germline;maternal;paternal 17 50191826 GTGCAAGGTCCCCCTGGTCCTGCTGGTCCCCGAGGGGCCAACGGTGCTCCCGGCAACGATG -1 434877 NM_001212.3(C1QBP):c.823C>T (p.Leu275Phe) C1QBP Oct 12, 2017 MedGen:CN533576,OMIM:617713 COMBINED OXIDATIVE PHOSPHORYLATION DEFICIENCY 33 germline 17 5433041 CACCAGGAGTACATTACTTTTCTTGAAGACCTCAAGAGTTTTGTCAAGAGCCAGTAGAGCA 104894688 27180 NM_000148.3(FUT1):c.826C>T (p.Gln276Ter) FUT1 Jun 21, 1994 MedGen:C1859411 Para-Bombay phenotype germline 19 48750456 GAGTGGTGTAAAGAAAACATCGACACCTCCCAGGGCGATGTGACGTTTGCTGGCGATGGAC 121917712 28863 NM_000168.5(GLI3):c.1873C>T (p.Arg625Trp) GLI3 Jul 01, 2003 MedGen:C0265306,OMIM:175700,SNOMED CT:32985001 Greig cephalopolysyndactyly syndrome germline 7 41972567 ACTAAGCGTTACACAGACCCAAGCTCCCTCCGGAAACATGTGAAGACAGTGCATGGCCCAG 886040822 261533 NM_000059.3(BRCA2):c.9139C>T (p.Gln3047Ter) BRCA2 Oct 18, 2016 MedGen:C2675520,OMIM:612555 Breast-ovarian cancer, familial 2 germline 13 32380028 TTTCTGTAGGTTTCAGATGAAATTTTATTTCAGATTTACCAGCCACGGGAGCCCCTTCACT 1052078370 417143 NM_019098.4(CNGB3):c.208C>T (p.Gln70Ter) CNGB3 Mar 27, 2017 MedGen:C1849792,OMIM:262300 Achromatopsia 3 maternal 8 86739658 GTCACGTCTGAAGAGCCACACACCAACATACAAGGTCAGAATGCAGTCTGAAAAAAAAAAA 63751208 30500 NM_000518.4(HBB):c.-50-101C>T HBB Aug 07, 2017 MedGen:C3841475;MedGen:C0005283,OMIM:613985,Orphanet:ORPHA848,SNOMED CT:65959000 Beta-plus-thalassemia;beta Thalassemia germline;unknown 11 5227172 AGGTACGGCTGTCATCACTTAGACCTCACCCTGTGGAGCCACACCCTAGGGTTGGCCAATC 754221948 258310 NM_198056.2(SCN5A):c.4719C>T (p.Gly1573=) SCN5A May 12, 2017 MedGen:CN230736;MedGen:CN517202 Cardiovascular phenotype;not provided germline 3 38554373 CAACCTGCTCTTTGTGGCCATCTTCACAGGCGAGTGTATTGTCAAGCTGGCTGCCCTGCGC 377577594 362761 NM_175629.2(DNMT3A):c.2644C>T (p.Arg882Cys) DNMT3A May 31, 2016 Human Phenotype Ontology:HP:0004808,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:ORPHA519,SNOMED CT:17788007;Human Phenotype Ontology:HP:0030078,MeSH:C538231,MedGen:C0152013;MeSH:D009190,MedGen:C0026986,OMIM:614286 Acute myeloid leukemia;Adenocarcinoma of lung;Myelodysplastic syndrome somatic 2 25234374 GTCCACTATACTGACGTCTCCAACATGAGCCGCTTGGCGAGGCAGAGACTGCTGGGCCGGT 794729284 199031 NM_001256850.1(TTN):c.68923C>T (p.Arg22975Ter) TTN Apr 17, 2013 MedGen:CN517202 not provided germline 2 178572286 GAAACCGCAGAATCTGTGAAAGCATCAGAACGACCTCTTCCTCCAGGAAAAATAACTTTGA -1 470104 NM_000268.3(NF2):c.592C>T (p.Arg198Ter) NF2 Jul 13, 2017 MedGen:C0027832,OMIM:101000,Orphanet:ORPHA637,SNOMED CT:92503002 Neurofibromatosis, type 2 germline 22 29655669 ATTACTGCTTGGTACGCAGAGCACCGAGGCCGAGCCAGGTGAGGCCCATTCATTGTTGGTT 121913403 32625 NM_001904.3(CTNNB1):c.110C>T (p.Ser37Phe) CTNNB1 May 31, 2016 Human Phenotype Ontology:HP:0030078,MeSH:C538231,MedGen:C0152013;MedGen:C0007112;MedGen:C0278701;Human Phenotype Ontology:HP:0011459,MedGen:C0152018,Orphanet:ORPHA70482;MedGen:C2239176,OMIM:114550,Orphanet:ORPHA88673,SNOMED CT:187769009,SNOMED CT:25370001;Human Phenotype Ontology:HP:0002861,MeSH:D008545,MedGen:C0025202,SNOMED CT:2092003;MedGen:C0153574,Orphanet:ORPHA213569;Human Phenotype Ontology:HP:0002885,MeSH:D008527,MedGen:C0025149,OMIM:155255,Orphanet:ORPHA616;MeSH:D010051,MedGen:CN236629;Human Phenotype Ontology:HP:0030434,MeSH:D018296,MedGen:C0206711,OMIM:132600,Orphanet:ORPHA91414;Human Phenotype Ontology:HP:0006740,MedGen:C0279680;MeSH:D002583,MedGen:CN236667 Adenocarcinoma of lung;Adenocarcinoma of prostate;Adenocarcinoma of stomach;Carcinoma of esophagus;Hepatocellular carcinoma;Malignant melanoma;Malignant neoplasm of body of uterus;Medulloblastoma;Ovarian Neoplasms;Pilomatrixoma;Transitional cell carcinoma of the bladder;Uterine cervical neoplasms somatic 3 41224622 AACAGTCTTACCTGGACTCTGGAATCCATTCTGGTGCCACTACCACAGCTCCTTCTCTGAG 104894004 32886 NM_198098.3(AQP1):c.113C>T (p.Pro38Leu) AQP1 Sep 09, 1994 MedGen:CN795021 COLTON-NULL PHENOTYPE germline 7 30912022 GCATCGGTTCTGCCCTGGGCTTCAAATACCCGGTGGGGAACAACCAGACGGCGGTCCAGGA 74315377 20480 NM_005149.2(TBX19):c.383C>T (p.Ser128Phe) TBX19 Mar 23, 2001 Human Phenotype Ontology:HP:0011748,MedGen:C0342388,OMIM:201400,SNOMED CT:237692001 ACTH deficiency germline 1 168291339 GCCACAGCTGCGTCTACATTCACCCGGACTCCCCCAACTTTGGGGCCCACTGGATGAAAGC 141074983 359415 NM_025216.2(WNT10A):c.337C>T (p.Arg113Cys) WNT10A Jul 23, 2015 MedGen:CN517202 not provided germline 2 218882384 CAGCGCTGGAACTGCTCAAGCCTGGAGACTCGCAACAAGATCCCCTATGAGAGTCCCATCT 137854559 15396 NM_000267.3(NF1):c.4021C>T (p.Gln1341Ter) NF1 Aug 02, 2015 MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003 Neurofibromatosis, type 1 germline;somatic 17 31249030 AGCCTTGAGGAAAACCAGCGGAACCTCCTTCAGATGACTGAAAAGTTCTTCCATGCCATCA 118203989 16339 NM_001042702.3(PJVK):c.499C>T (p.Arg167Ter) PJVK May 22, 2015 MedGen:C1857744,OMIM:610220;MedGen:CN043648,Orphanet:ORPHA87884 Deafness, autosomal recessive 59;Nonsyndromic hearing loss and deafness germline 2 178456101 TGTGTGGTCATGGAGAGCATCCGAACCACACGACAGTGCTCACTGTCTGTGCATGCTGGAA 200901816 394709 NM_001369.2(DNAH5):c.13486C>T (p.Arg4496Ter) DNAH5 Apr 27, 2017 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244 Ciliary dyskinesia germline 5 13701289 TTTAACCCCCAGGGATTTTTAACTGCAATGCGACAGGTAAGAGCTCTGATTTGCACCCGTT 397516321 52461 NM_000260.3(MYO7A):c.5617C>T (p.Arg1873Trp) MYO7A Mar 09, 2011 MedGen:C1568247,OMIM:276900,Orphanet:ORPHA231169 Usher syndrome, type 1 germline 11 77205598 CACTGCCCACTCGCCATCGACTGCCTGCAACGGCTCCAGAAAGCCCTGAGGTACAGCGGCC 138556525 264435 NM_000429.2(MAT1A):c.776C>T (p.Ala259Val) MAT1A Mar 30, 2017 MedGen:C0268621,OMIM:250850,Orphanet:ORPHA168598,SNOMED CT:57835009;MedGen:CN517202 Hepatic methionine adenosyltransferase deficiency;not provided germline 10 80275192 TCTTGATTTCTCTCCCTCTGCAGGGGGATGCGGGTGTCACTGGCCGTAAGATTATTGTGGA 1131691759 422381 NM_001098.2(ACO2):c.34C>T (p.Gln12Ter) ACO2 Oct 12, 2015 MedGen:CN517202 not provided germline 22 41469180 GCGCCCTACAGCCTACTGGTGACTCGGCTGCAGGTGAGCGAGCTCAGGGACCTCTGGGTTC 104893970 21160 NM_001075098.3(MOCS1):c.217C>T (p.Arg73Trp) MOCS1 Jun 01, 2003 MedGen:C1854988,OMIM:252150,Orphanet:ORPHA308386 Molybdenum cofactor deficiency, complementation group A germline 6 39927362 GACAGCTTCGGCCGGCAGCACAGCTACCTGCGGATCTCCCTCACAGAGAAGTGCAACCTCA 1057520391 368900 NM_178012.4(TUBB2B):c.533C>T (p.Thr178Met) TUBB2B Jan 04, 2017 MedGen:CN517202 not provided germline 6 3225556 GCGTCATGCCCTCACCCAAGGTGTCAGACACGGTGGTGGAGCCCTACAACGCCACCCTCTC 760228510 231681 NM_000535.6(PMS2):c.631C>T (p.Arg211Ter) PMS2 Sep 25, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0009405,Orphanet:ORPHA443090;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Hereditary nonpolyposis colon cancer;not provided germline 7 5999182 AGTTGCACCAATCAGCTTGGACAAGGAAAACGACAGCCTGTGGTATGCACAGGTGGAAGCC 128621193 26402 NM_000061.2(BTK):c.763C>T (p.Arg255Ter) BTK Mar 19, 2013 MedGen:C1832241,OMIM:601495,Orphanet:ORPHA33110;MedGen:C0221026,OMIM:300755,Orphanet:ORPHA47,SNOMED CT:65880007 Agammaglobulinemia, non-Bruton type;X-linked agammaglobulinemia germline X 101360581 GAGGAAAGCAACTTACCATGGTGGAGAGCACGAGATAAAAATGGGTGAGTCCACACCAGCC 80338645 76441 NM_000081.3(LYST):c.1540C>T (p.Arg514Ter) LYST Feb 16, 2012 MedGen:C0007965,OMIM:214500,Orphanet:ORPHA167,SNOMED CT:111396008 Chédiak-Higashi syndrome not provided 1 235809278 TGTGAATATTCTCATTTTATGCATCATCACCGAGATCTCTCAGGTCTTCTGGTTTCGGCTT 397517329 55108 NM_022124.5(CDH23):c.4309C>T (p.Arg1437Ter) CDH23 Dec 28, 2016 MedGen:C1832845,OMIM:601067;MedGen:CN517202 Usher syndrome, type 1D;not provided germline 10 71738597 AGCATACCCGAGGACTGCCCTGTGGGCCAGCGAGTGGCTACTGTCAAGGCCTGGGACCCTG 137852690 24032 NM_000349.2(STAR):c.653C>T (p.Ala218Val) STAR Nov 01, 1999 MedGen:C0342474,OMIM:201710,Orphanet:ORPHA90790,SNOMED CT:44231009 Cholesterol monooxygenase (side-chain cleaving) deficiency germline 8 38145313 CTCCTGACTTGACTTCTCCATTTGCCAGGGCGGAGCACGGTCCCACTTGCATGGTGCTTCA 1057520739 368534 NM_000046.3(ARSB):c.1325C>T (p.Thr442Met) ARSB May 27, 2015 MedGen:CN517202 not provided germline 5 78781863 CAATTAGACATGGAAATTGGAAACTCCTCACGGGCTACCCAGGTAGAGTCCTTAGCTTAGC 72552732 36750 NM_003060.3(SLC22A5):c.1319C>T (p.Thr440Met) SLC22A5 Jun 30, 2017 MedGen:C0342788,OMIM:212140,Orphanet:ORPHA158,SNOMED CT:21764004;MedGen:CN517202 Renal carnitine transport defect;not provided germline;unknown 5 132392484 TCCTGGTGATGGTGGGCAAGTTTGGAGTCACGGCTGCCTTTTCCATGGTCTACGTGTACAC 121434313 16849 NM_152594.2(SPRED1):c.70C>T (p.Arg24Ter) SPRED1 Dec 25, 2015 MedGen:C1969623,OMIM:611431,Orphanet:ORPHA137605 Legius syndrome germline;unknown 15 38299410 TATGCACGAGTGCGAGCTGTGGTGATGACCCGAGATGACTCAAGTGGTGGATGGTTACCAC 199422272 22365 NR_001566.1(TERC):n.116C>T TERC May 10, 2012 MedGen:C1851970,OMIM:127550;MedGen:C3553622,OMIM:614743 Dyskeratosis congenita autosomal dominant;Pulmonary fibrosis and/or bone marrow failure, telomere-related, 2 germline 3 169764945 TCCCCGCGCGCTGTTTTTCTCGCTGACTTTCAGCGGGCGGAAAAGCCTCGGCCTGCCGCCT 398123378 98878 NM_000426.3(LAMA2):c.5914C>T (p.Gln1972Ter) LAMA2 Aug 16, 2017 MedGen:CN117977;MedGen:C1263858,OMIM:607855,Orphanet:ORPHA258,SNOMED CT:111503008 Laminin alpha 2-related dystrophy;Merosin deficient congenital muscular dystrophy germline 6 129427800 TTATTAAAGGAAGATGCCAAAGGCTGTCTTCAGAAAAGCTTCAGGATTCTTAACGAAGCCA 111033722 36547 NM_000155.3(GALT):c.554C>T (p.Pro185Leu) GALT Dec 04, 2012 MedGen:C0268151,OMIM:230400,Orphanet:ORPHA79239,SNOMED CT:124354006 Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase not provided 9 34648161 GTGCCATGATGGGCTGTTCTAACCCCCACCCCCACTGCCAGGTAAGGGTGTCAGGGGCTCC 1054894 26363 NM_004085.3(TIMM8A):c.238C>T (p.Arg80Ter) TIMM8A Jun 01, 2001 MedGen:C0796074,OMIM:304700,Orphanet:ORPHA52368 Mohr-Tranebjaerg syndrome germline X 101346555 TTCATTGATACAAGCCAGTTCATCTTGAATCGACTGGAACAGACCCAGAAATCCAAGCCAG 1057516052 353952 NM_000033.3(ABCD1):c.529C>T (p.Gln177Ter) ABCD1 Jun 29, 2016 MedGen:C0162309,OMIM:300100,Orphanet:ORPHA43,SNOMED CT:65389002 Adrenoleukodystrophy germline X 153725795 GTGGCCCACGCCTACCGCCTCTACTTCTCCCAGCAGACCTACTACCGGGTCAGCAACATGG -1 482102 NM_015272.4(RPGRIP1L):c.2299C>T (p.Gln767Ter) RPGRIP1L Aug 07, 2017 MedGen:CN517202 not provided germline 16 53648969 ACATCAAATTTTAAGGGGCCAGAGCATATGCAGTCGGTAAGCTCATTTGGCTTTAAGACCC 879255551 247465 NM_001399.4(EDA):c.865C>T (p.Arg289Cys) EDA Aug 17, 2016 MedGen:C1970757,OMIM:313500 Tooth agenesis, selective, X-linked, 1 germline X 70033469 ATGAACCCCAAGGTGTTTAAGCTACATCCCCGCAGCGGGGAGCTGGAGGTACTGGTGGACG 201551805 186610 NM_000228.2(LAMB3):c.1705C>T (p.Arg569Ter) LAMB3 Jun 02, 2017 MedGen:C0079683,OMIM:226700,Orphanet:ORPHA79404,SNOMED CT:400140006;MedGen:CN517202 Junctional epidermolysis bullosa gravis of Herlitz;not provided germline;unknown 1 209625919 TTGACCGGGCCCCGCTGTGACCAGTGCCAGCGAGGCTACTGTAATCGCTACCCGGTGTGCG 137854574 15847 NM_000038.5(APC):c.1690C>T (p.Arg564Ter) APC Jul 07, 2017 MedGen:C2713442,OMIM:175100;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Familial adenomatous polyposis 1;Hereditary cancer-predisposing syndrome;not provided germline;unknown 5 112828919 CGAGCAGATGTAAATAGTAAAAAGACGTTGCGAGAAGTTGGAAGTGTGAAAGCATTGATGG 104893728 20972 NM_006580.3(CLDN16):c.704C>T (p.Ser235Phe) CLDN16 Jul 02, 1999 MedGen:C0268448,OMIM:248250,Orphanet:ORPHA31043,SNOMED CT:80710001 Primary hypomagnesemia germline 3 190408425 TTCTTGGTATCCAATATAAATTTGGTTGGTCCTGTTGGCTCGGAATGGCTGGGTCTCTGGG 200492211 133037 NM_000179.2(MSH6):c.3142C>T (p.Gln1048Ter) MSH6 Jul 05, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0009405,Orphanet:ORPHA443090;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Hereditary nonpolyposis colon cancer;Lynch syndrome;not provided germline;unknown 2 47801125 TATAACTTTGATAAAAATTACAAGGACTGGCAGTCTGCTGTAGAGTGTATCGCAGTGTTGG 876657726 230571 NM_153700.2(STRC):c.3493C>T (p.Gln1165Ter) STRC Jun 16, 2015 MedGen:CN043648,Orphanet:ORPHA87884 Nonsyndromic hearing loss and deafness germline 15 43610317 AGACGCTACTGGGAGCTGCCCTGGTCTGAGCAGCAGGTAATTCTCCCCACTTAATTTCAGA 886039346 260237 NM_001958.3(EEF1A2):c.1267C>T (p.Arg423Cys) EEF1A2 Aug 09, 2016 MedGen:CN517202 not provided germline 20 63488423 CGCCCACACGCCGCCCCCCGCCCCCCAGGCCGCTTCGCCGTGCGCGACATGAGGCAGACGG 72645366 414015 NM_000088.3(COL1A1):c.1081C>T (p.Arg361Ter) COL1A1 Jun 27, 2017 MedGen:C0023931,OMIM:166200,SNOMED CT:385482004 Osteogenesis imperfecta type I germline;unknown 17 50195641 ATTCAGGGTGAAGCTGGTCCCCAAGGGCCCCGAGGCTCTGAAGGTCCCCAGGGTGTGCGTG 886041179 265129 NM_000390.3(CHM):c.799C>T (p.Arg267Ter) CHM Aug 11, 2015 MedGen:CN517202 not provided germline X 85958881 TTTAAAAATATTACCAGGATTCTTGCATTTCGAGAAGGACGAGTGGAACAGGTACTGTGCT 104893613 24513 NM_001298.2(CNGA3):c.847C>T (p.Arg283Trp) CNGA3 Jul 21, 2014 MedGen:C1857618,OMIM:216900;Human Phenotype Ontology:HP:0007803,MedGen:C1857589 Achromatopsia 2;Monochromacy germline;unknown 2 98396017 GTGAGGTTCAACCGCCTACTGAAGTTTTCCCGGCTCTTTGAATTCTTTGACCGCACAGAGA 548527219 437687 NM_001145112.1(PATL2):c.478C>T (p.Arg160Ter) PATL2 Dec 22, 2017 MedGen:CN562785,OMIM:617743 OOCYTE MATURATION DEFECT 4 germline 15 44672425 CATCTGACCCAGCTCCACCCTCGGCACCAACGAATCTTGCAGCAGCAGCAGCATAGTCAAA 45517216 59280 NM_000548.4(TSC2):c.2194C>T (p.Gln732Ter) TSC2 Mar 08, 2017 MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000;MedGen:CN517202 Tuberous sclerosis syndrome;not provided germline 16 2072337 CTCATCTTTACTTCCCCTTGCAGTGTGGACCAGCTGTGCTCTGCTCTCTGCTCCATGGTAC -1 442849 NM_006516.2(SLC2A1):c.808C>T (p.Gln270Ter) SLC2A1 Jul 24, 2017 MedGen:CN517202 not provided germline 1 42929652 CTGGAGCTGTTCCGCTCCCCCGCCTACCGCCAGCCCATCCTCATCGCTGTGGTGCTGCAGC 200396166 247436 NM_001142298.1(SQSTM1):c.-47-1924C>T SQSTM1 Nov 01, 2013 MedGen:C4225326,OMIM:616437 Frontotemporal dementia and/or amyotrophic lateral sclerosis 3 germline 5 179821034 TCAGCTTCTGCTGCAGCCCCGAGCCTGAGGCGGAAGCCGAGGCTGCGGCGGGTCCGGGACC 797044776 195562 NM_000169.2(GLA):c.1087C>T (p.Arg363Cys) GLA Feb 03, 2015 Human Phenotype Ontology:HP:0001071,MedGen:C0002986,OMIM:301500,Orphanet:ORPHA324,SNOMED CT:16652001 Fabry disease germline X 101398012 ATGATAAACCGGCAGGAGATTGGTGGACCTCGCTCTTATACCATCGCAGTTGCTTCCCTGG 113871094 44746 NM_000138.4(FBN1):c.4786C>T (p.Arg1596Ter) FBN1 Jul 11, 2017 MedGen:C0265287,OMIM:102370,Orphanet:ORPHA969,SNOMED CT:254090007;MedGen:C1851286,OMIM:129600;MedGen:C3280054,OMIM:614185;MedGen:C1858556,OMIM:604308,Orphanet:ORPHA99715;MedGen:C4310796,OMIM:616914,Orphanet:ORPHA300382;MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:C1861456,OMIM:184900,Orphanet:ORPHA2833;MedGen:CN118826,Orphanet:ORPHA91387;MedGen:C1869115,OMIM:608328,Orphanet:ORPHA2084;MedGen:CN517202 Acromicric dysplasia;Ectopia lentis, isolated, autosomal dominant;Geleophysic dysplasia 2;MASS syndrome;Marfan lipodystrophy syndrome;Marfan syndrome;Marfan syndrome;Marfan syndrome;Stiff skin syndrome;Thoracic aortic aneurysm and aortic dissection;Weill-Marchesani syndrome 2;not provided de novo;germline;unknown 15 48465820 AAAATTCTTTGTCCTGGAGGGGAAGGTTTCCGACCAAATCCTATCACCGTTATATTGGAAG 780705654 227932 NM_001031710.2(KLHL7):c.1258C>T (p.Arg420Cys) KLHL7 Jul 28, 2016 MedGen:C1848947,OMIM:272430;MedGen:C4310742,OMIM:617055 Cold-induced sweating syndrome 1;Cold-induced sweating syndrome 3 germline;inherited 7 23167916 TGGCACACAAAGCCCAGCATGCTGACCCAGCGCTGCAGCCATGGGATGGTGGAAGCCAATG 387907126 40131 NM_145239.2(PRRT2):c.718C>T (p.Arg240Ter) PRRT2 Mar 24, 2015 MedGen:C1865926,OMIM:602066,Orphanet:ORPHA31709;MedGen:CN517202 Infantile convulsions and paroxysmal choreoathetosis, familial;not provided germline 16 29813772 AGGGCACACAGTGGGCATCCAGGATCTCCCCGAGGTAGCCTGAGCCGCCACCCCAGCTCCC 760906097 214220 NM_023073.3(CPLANE1):c.2611C>T (p.Arg871Cys) CPLANE1 Feb 23, 2015 MedGen:C3553264,OMIM:614615 Joubert syndrome 17 unknown 5 37221459 GGAGGAAGAAGGACGTATTTTCTTCAGATACGCTATTATCTTTCTCTCTTATACTGCCACC 137852577 24869 NM_000044.4(AR):c.2521C>T (p.Arg841Cys) AR Jan 26, 2011 MedGen:C0039585,OMIM:300068,SNOMED CT:12313004;MedGen:C0268301,OMIM:312300,Orphanet:ORPHA90797,SNOMED CT:58672003 Androgen resistance syndrome;Partial androgen insensitivity syndrome germline X 67722898 CTTCGAATGAACTACATCAAGGAACTCGATCGTATCATTGCATGCAAAAGAAAAAATCCCA 28989186 21799 NM_001211.5(BUB1B):c.580C>T (p.Arg194Ter) BUB1B Jul 27, 2015 MedGen:CN031748,OMIM:257300;MedGen:C1864389,OMIM:176430 Mosaic variegated aneuploidy syndrome 1;Premature chromatid separation trait germline;maternal 15 40176672 GAACCACTAGAAAGACTACAGTCCCAGCACCGGTAAACTTTCTTTGGAGCTTGTCTTAACT 104894578 23958 NM_000891.2(KCNJ2):c.652C>T (p.Arg218Trp) KCNJ2 Apr 18, 2017 MedGen:C1563715,OMIM:170390,Orphanet:ORPHA37553,SNOMED CT:422348008;MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MedGen:CN517202 Andersen Tawil syndrome;Congenital long QT syndrome;not provided germline 17 70175691 CTGTGTTTGATGTGGCGAGTGGGCAATCTTCGGAAAAGCCACTTGGTGGAAGCTCATGTTC 587782350 151983 NM_000314.6(PTEN):c.737C>T (p.Pro246Leu) PTEN Nov 08, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline 10 87957955 ACAAGTTCATGTACTTTGAGTTCCCTCAGCCGTTACCTGTGTGTGGTGATATCAAAGTAGA 727503326 174141 NM_004999.3(MYO6):c.826C>T (p.Arg276Ter) MYO6 Jan 27, 2014 MedGen:CN043648,Orphanet:ORPHA87884 Nonsyndromic hearing loss and deafness germline 6 75844906 GTTTAATTTGTTTTGTCATAGTATTTAAACCGAGGCTGCACTAGATACTTTGCTAACAAAG 58932704 29517 NM_170707.3(LMNA):c.1357C>T (p.Arg453Trp) LMNA Aug 30, 2017 MedGen:C0410190,OMIM:181350,Orphanet:ORPHA98853,SNOMED CT:240072005;MedGen:CN043576;MedGen:C1834653,OMIM:159001,Orphanet:ORPHA264;MeSH:D009136,MedGen:C0026850,Orphanet:ORPHA98473;MedGen:CN517202 Benign scapuloperoneal muscular dystrophy with cardiomyopathy;Charcot-Marie-Tooth disease, type 2;Limb-girdle muscular dystrophy, type 1B;Muscular dystrophy;not provided germline;unknown 1 156136413 GAGGAGGTGGATGAGGAGGGCAAGTTTGTCCGGCTGCGCAACAAGTCCAATGAGGTAGGCT 796065046 204350 NM_005589.3(ALDH6A1):c.184C>T (p.Pro62Ser) ALDH6A1 May 01, 2012 MedGen:C1864150,OMIM:614105 Methylmalonate semialdehyde dehydrogenase deficiency germline 14 74072539 AAAAGTGACAAATGGATCGATATCCACAACCCAGTAAGCGAAGCTGCTTTGGGACTTCAAC 74315473 18116 NM_000487.5(ARSA):c.868C>T (p.Arg290Cys) ARSA Dec 15, 2015 MedGen:C0023522,OMIM:250100,Orphanet:ORPHA512,SNOMED CT:396338004 Metachromatic leukodystrophy germline;unknown 22 50626265 CGCCTCCTGTGTCCCAGACCTGAGACCATGCGTATGTCCCGAGGCGGCTGCTCCGGTCTCT 121908610 21140 NM_004820.4(CYP7B1):c.1088C>T (p.Ser363Phe) CYP7B1 Feb 01, 2008 MedGen:C1849115,OMIM:270800,Orphanet:ORPHA100986 Spastic paraplegia 5A germline 8 64604827 AAAGCAGCATTTTTGAAGCTTTACGACTGTCCTCATATTCAACCACCATTCGTTTTGTTGA 199422276 47890 NR_001566.1(TERC):n.180C>T TERC May 10, 2012 Human Phenotype Ontology:HP:0001915,MedGen:C0002874,OMIM:609135,SNOMED CT:306058006 Aplastic anemia not provided 3 169764881 ACCGTTCATTCTAGAGCAAACAAAAAATGTCAGCTGCTGGCCCGTTCGCCCCTCCCGGGGA 387906934 39523 NM_177438.2(DICER1):c.2516C>T (p.Ser839Phe) DICER1 Jan 05, 2011 MedGen:C0018022,OMIM:138800 Goiter, multinodular 1, with or without Sertoli-Leydig cell tumors germline 14 95108014 TTGAGTTGAAGAAGTCTGGTTTCATGTTGTCTCTACAAATGCTTGAGTTGATTACAAGACT 119473037 19214 NM_014140.3(SMARCAL1):c.1933C>T (p.Arg645Cys) SMARCAL1 Feb 01, 2002 MedGen:C0877024,OMIM:242900,Orphanet:ORPHA1830 Schimke immunoosseous dysplasia germline 2 216450927 CTCCTGCTGGAGGAAGCAGTCATGCTGCGGCGCCTCAAGTCCGACGTCCTTTCCCAGCTGC 104894328 32867 NM_000486.5(AQP2):c.559C>T (p.Arg187Cys) AQP2 Aug 18, 2011 MedGen:C4015884;Human Phenotype Ontology:HP:0009806,MedGen:C0162283,Orphanet:ORPHA223,SNOMED CT:111395007 Diabetes insipidus, nephrogenic, autosomal recessive;Nephrogenic diabetes insipidus germline 12 49954663 CATTACACCGGCTGCTCTATGAATCCTGCCCGCTCCCTGGCTCCAGCTGTCGTCACTGGCA 387906898 39414 NM_020433.4(JPH2):c.494C>T (p.Ser165Phe) JPH2 Jun 01, 2007 MedGen:C3151264,OMIM:613873 Familial hypertrophic cardiomyopathy 17 germline 20 44160293 TGCGCTCGCCGCTGCGCACGTCGCTGTCGTCCCTGCGCAGCGAGCACAGCAACGGCACGGT 121908572 21203 NM_004328.4(BCS1L):c.296C>T (p.Pro99Leu) BCS1L Sep 01, 2001 MedGen:C1850598 Leigh syndrome due to mitochondrial complex III deficiency germline 2 218661283 GCCGCATTTCCACTAAGTTTGAATTTGTCCCCAGCCCTGGAAACCATTTTATCTGGTAAGG 121908096 19294 NM_000784.3(CYP27A1):c.1183C>T (p.Arg395Cys) CYP27A1 Sep 13, 2016 MedGen:C0238052,OMIM:213700,Orphanet:ORPHA909,SNOMED CT:63246000;MedGen:CN517202 Cholestanol storage disease;not provided germline 2 218814186 TTGCTCAAAGCTGTGCTTAAGGAGACTCTGCGGTAGGACAGAATGCTGTTCTGGGGGGCAC 151244108 483364 NM_000251.2(MSH2):c.1225C>T (p.Gln409Ter) MSH2 Dec 14, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 2 47429890 GCAAACTTACAAGATTGTTACCGACTCTATCAGGGTATAAATCAACTACCTAATGTTATAC 863224884 213535 NM_002242.4(KCNJ13):c.458C>T (p.Thr153Ile) KCNJ13 May 09, 2017 MeSH:D057130,MedGen:C0339527,Orphanet:ORPHA65,SNOMED CT:193413001;MedGen:C3280062,OMIM:614186 Leber congenital amaurosis;Leber congenital amaurosis 16 germline 2 232770905 TCCTAGGCCTCATGCTAGAGGCTTTTATCACAGGTAATTTTGTCTTTGTTCTTAAAAAAAA 104894427 19377 NM_014239.3(EIF2B2):c.547C>T (p.Arg183Ter) EIF2B2 Jun 01, 2003 MedGen:C1847967,Orphanet:ORPHA99853 Ovarioleukodystrophy germline 14 75004850 ACAGTAGAGGCCTTCCTCAAAGAGGCTGCCCGAAAGAGGAAATTCCATGTCATTGTAGCAG 786205225 188131 NM_019056.6(NDUFB11):c.262C>T (p.Arg88Ter) NDUFB11 Aug 15, 2016 MedGen:C1708371,OMIM:500000,Orphanet:ORPHA137675;MedGen:C4225421,OMIM:300952;MedGen:CN517202 Infantile histiocytoid cardiomyopathy;Linear skin defects with multiple congenital anomalies 3;not provided de novo;germline X 47142690 AAGGACCCCGTTTTGGACGTCTGGAACATGCGACTTGTCTTCTTCTTTGGCGTCTCCATCA 121917758 27649 NM_176795.4(HRAS):c.173C>T (p.Thr58Ile) HRAS Apr 03, 2017 MedGen:C0587248,OMIM:218040,Orphanet:ORPHA3071,SNOMED CT:309776008 Costello syndrome germline 11 533883 GGGAGACGTGCCTGTTGGACATCCTGGATACCGCCGGCCAGGAGGAGTACAGCGCCATGCG 104894457 23524 NM_006432.3(NPC2):c.436C>T (p.Gln146Ter) NPC2 Apr 01, 2007 MedGen:C1843366,OMIM:607625 Niemann-Pick disease type C2 germline 14 74480707 CAAAGTCTCTTCTGCTGGGAAATCCCAGTACAGATCGTAAGTCTATCTGGGGGTGAGAGGG 751962801 223671 NM_024549.5(TCTN1):c.856C>T (p.Arg286Ter) TCTN1 Feb 10, 2016 MedGen:C3280031,OMIM:614173 Joubert syndrome 13 germline 12 110640437 GTCATTCAGTCTCTAAATAAAACGCTCACCCGACGGGAGGACACTGATGTGCTGCAGCCGA 28941781 18431 NM_147196.2(TMIE):c.274C>T (p.Arg92Trp) TMIE Sep 01, 2002 MedGen:C1832992,OMIM:600971 Deafness, autosomal recessive 6 germline 3 46709188 GTGCCACGGACCCGGAAGGAGATCGAAGCCCGGTACCTGCAGCGAAAGGCAGCCAAGATGT 137852464 25357 NM_000132.3(F8):c.6532C>T (p.Arg2178Cys) F8 Jan 01, 1995 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154863125 ATCCGTTTGCACCCAACTCATTATAGCATTCGCAGCACTCTTCGCATGGAGTTGATGGGCT 121912514 29480 NM_000238.3(KCNH2):c.2842C>T (p.Arg948Cys) KCNH2 Sep 01, 2006 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MedGen:C3150944 Congenital long QT syndrome;Long QT syndrome 1/2, digenic germline 7 150947729 CCTGAGAGCAGTGAGGATGAGGGCCCAGGCCGCAGCTCCAGCCCCCTCCGCCTGGTGCCCT 397516042 51914 NM_000256.3(MYBPC3):c.3811C>T (p.Arg1271Ter) MYBPC3 May 18, 2017 MedGen:C1861862,OMIM:115197;Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569;MedGen:C3715165,OMIM:615396;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Familial hypertrophic cardiomyopathy 4;Hypertrophic cardiomyopathy;Left ventricular noncompaction 10;Primary familial hypertrophic cardiomyopathy;not provided germline;unknown 11 47332075 GAGGCACGGTGTGAGTGCCGCCTGGAGGTGCGAGGTGAGGAGCCCTCGGGGCCAGGGCCTG 397514541 48185 NM_004168.3(SDHA):c.1526C>T (p.Ser509Leu) SDHA Feb 01, 2013 MedGen:C1855008,OMIM:252011,Orphanet:ORPHA3208 Mitochondrial complex II deficiency germline 5 240451 TGAGATTTGCTGATGGAAGCATAAGAACATCGGAACTGCGACTCAGCATGCAGAAGGTAAG 121918657 27801 NM_003172.3(SURF1):c.751C>T (p.Gln251Ter) SURF1 Mar 10, 2016 MedGen:C0023264,OMIM:256000,Orphanet:ORPHA506,SNOMED CT:29570005;MedGen:C1850599 Leigh syndrome;Leigh syndrome due to mitochondrial complex IV deficiency germline 9 133352446 GCAGAGCCCATCTTCATTGATGCCAACTTCCGTACGTTGTGGACCAGCCCATCTCGGAACA 118203434 58253 NM_000368.4(TSC1):c.733C>T (p.Arg245Ter) TSC1 Sep 27, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1854465,OMIM:191100;MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Tuberous sclerosis 1;Tuberous sclerosis syndrome;not provided germline 9 132921367 ACTGGATCCAAGGACCATGAACTGGACCCTCGAAGGTATAGAAACTAGTGTCAAAATTTTA 587783018 166168 NM_020366.3(RPGRIP1):c.832C>T (p.Arg278Ter) RPGRIP1 Sep 18, 2014 MedGen:C1854260,OMIM:613826 Leber congenital amaurosis 6 unknown 14 21307762 GCTTCCATTAAAGAGAAGGTAGAGCTGATTCGACTTAAGAAGCTCTTACATGAAAGAAATG 11230683 71023 NM_001173990.2(TMEM216):c.253C>T (p.Arg85Ter) TMEM216 Feb 23, 2015 MedGen:C1842577,OMIM:608091;MedGen:C1842577,OMIM:608091;MedGen:C1864148,OMIM:603194;MedGen:C1864148,OMIM:603194 Joubert syndrome 2;Joubert syndrome 2;Meckel syndrome type 2;Meckel syndrome type 2 unknown 11 61397797 CTGACAGGTACAAAGGGAAACCTCTGCCAGCGAAAGATGCCGCTCAGTATTAGCGTGGCCT 1060505023 404637 NM_001145860.1(POP1):c.1744C>T (p.Pro582Ser) POP1 Apr 10, 2017 MedGen:CN241834,OMIM:617396 Anauxetic dysplasia 2 germline 8 98148848 TTAAACCGGATGAGGAGTGAATTGCTGGTGCCTGGGTCACAGCTTATTTTAGGTCCCCATG 1057519509 362294 NM_001003694.1(BRPF1):c.1108C>T (p.Pro370Ser) BRPF1 Feb 09, 2017 MedGen:C4310617,OMIM:617333 Intellectual developmental disorder with dysmorphic facies and ptosis germline 3 9739507 GTCTGCTTCGCCAACACGGTCTTCCTAGAGCCTATTGACAGCATTGAGCACATCCCACCAG 80356776 76565 NM_001876.3(CPT1A):c.941C>T (p.Thr314Ile) CPT1A Mar 07, 2013 MedGen:C0342789,OMIM:255120,SNOMED CT:238001003 Carnitine palmitoyltransferase I deficiency not provided 11 68793341 GCTCCGCTCAGTGGGAGCGGATGTTTAATACTTCCCGGATCCCAGGAGAGGAGACAGGTGA 483352926 102962 NM_001097642.2(GJB1):c.172C>T (p.Pro58Ser) GJB1 Nov 01, 2013 MedGen:C0393808,OMIM:302800,Orphanet:ORPHA101075,SNOMED CT:230552007 X-linked hereditary motor and sensory neuropathy germline X 71223879 AAATCTTCCTTCATCTGCAACACACTCCAGCCTGGCTGCAACAGCGTTTGCTATGACCAAT 33939927 16977 NM_198578.3(LRRK2):c.4321C>T (p.Arg1441Cys) LRRK2 Jun 13, 2017 MedGen:C1846862,OMIM:607060 Parkinson disease 8, autosomal dominant germline 12 40310434 AAGAGGGTTTTGTGTCTTTCCCTCCAGGCTCGCGCTTCTTCTTCCCCTGTGATTCTCGTTG 554197975 75260 NM_015375.2(DSTYK):c.655-3C>T DSTYK Jan 25, 2018 Gene:100034704,MedGen:C1835826,OMIM:610805 Congenital anomalies of kidney and urinary tract 1, susceptibility to germline 1 205169835 AGGCGCTGATATATGACCCCCTTCCCCTTCCAGGAAGTGGACGTTGTGGTAGCACCATGCC 587777696 165608 NM_004170.5(SLC1A1):c.1333C>T (p.Arg445Trp) SLC1A1 Jan 01, 2011 MedGen:C1857253,OMIM:222730,Orphanet:ORPHA2195 Dicarboxylic aminoaciduria germline 9 4585316 GTCTGACTCCTCCCGTCTCTCCCCAGGGACCGGTTCAGGACCATGGTCAACGTCCTTGGTG 1064794022 411249 NM_014927.4(CNKSR2):c.1282C>T (p.Arg428Ter) CNKSR2 Aug 06, 2015 MedGen:CN517202 not provided germline X 21532046 GAAAAAGGAAGATCAAGTAGTCAAGGAAGACGAGAAAGCACCCCAACTTATGGTAAGAGTT 1800028 227407 NM_000511.5(FUT2):c.604C>T (p.Arg202Ter) FUT2 Mar 18, 2016 MedGen:C2674252,OMIM:612542 Vitamin b12 plasma level quantitative trait locus 1 germline 19 48703560 CCGGGCACCTTTGTAGGGGTCCATGTTCGCCGAGGGGACTATGTCCATGTCATGCCAAAAG 786205148 187662 NM_183059.2(RD3):c.112C>T (p.Arg38Ter) RD3 Jan 01, 2013 MedGen:C1857743,OMIM:610612 Leber congenital amaurosis 12 germline 1 211481304 ACGCTTATGATGGAGCTGACGGGGCAGATGCGAGAGGCTGAGAGGCAGCAGCGGGAGCGCA 121908673 21324 NM_002335.3(LRP5):c.758C>T (p.Thr253Ile) LRP5 Mar 01, 2003 MedGen:C1843330,OMIM:607634,Orphanet:ORPHA2783 Osteopetrosis autosomal dominant type 1 germline 11 68363818 TGACGCTCTCCGGGGACACTCTGTACTGGACAGACTGGCAGACCCGCTCCATCCATGCCTG 1131692304 424525 NM_000280.4(PAX6):c.403C>T (p.Gln135Ter) PAX6 - MedGen:C0344542,OMIM:106210 Aniridia 1 maternal 11 31800811 AGAGTTCTTCGCAACCTGGCTAGCGAAAAGCAACAGATGGGCGCAGACGGCATGTATGATA 63750636 96378 NM_000251.2(MSH2):c.2131C>T (p.Arg711Ter) MSH2 Oct 03, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0009405,Orphanet:ORPHA443090;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Hereditary nonpolyposis colon cancer;Lynch syndrome;not provided germline;unknown 2 47476492 GAAGTGTCCATTGTGGACTGCATCTTAGCCCGAGTAGGGGCTGGTGACAGTCAATTGAAAG 587784033 168505 NM_133433.3(NIPBL):c.7102C>T (p.Gln2368Ter) NIPBL Feb 08, 2013 MedGen:CN029798,OMIM:122470 Cornelia de Lange syndrome 1 germline 5 37052405 GTGGCTGGTATGAAGATGTCTTACCAGGTACAACAGGCAATCAACACATGCCTAAAAGATC 121908587 28589 NM_006206.5(PDGFRA):c.2021C>T (p.Thr674Ile) PDGFRA Mar 27, 2003 MedGen:C4016331 Hypereosinophilic syndrome, idiopathic, resistant to imatinib germline 4 54278380 TTGTCCCCATAGGCCCCATTTACATCATCACAGAGTATTGCTTCTATGGAGATTTGGTCAA 120074150 17859 NM_017890.4(VPS13B):c.7051C>T (p.Arg2351Ter) VPS13B Jun 01, 2003 MedGen:C0265223,OMIM:216550,Orphanet:ORPHA193,SNOMED CT:56604005 Cohen syndrome germline 8 99720973 TATCCAGAACCTAGAGTACTCACCCTTGTACGAATAACTCCTGTACCTTTTAACACCACAG 28933384 28515 NM_000219.5(KCNE1):c.20C>T (p.Thr7Ile) KCNE1 Nov 01, 1997 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MedGen:C2676723,OMIM:612347 Congenital long QT syndrome;Jervell and Lange-Nielsen syndrome 2 germline 21 34449615 TAATGCCCAGGATGATCCTGTCTAACACCACAGCGGTGACGCCCTTTCTGACCAAGCTGTG 142371860 70498 NM_145038.4(DRC1):c.352C>T (p.Gln118Ter) DRC1 Feb 28, 2017 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244;MedGen:C3809087,OMIM:615294;MedGen:C0022521,OMIM:244400,Orphanet:ORPHA98861,SNOMED CT:42402006 Ciliary dyskinesia;Ciliary dyskinesia, primary, 21;Kartagener syndrome germline 2 26421396 AGGAGAGTCGAAGAAGAGGAGATAAAGCGTCAAAGGTAAGGACTGTGCTACTCTGCAGCTG 267608453 153549 NM_003159.2(CDKL5):c.352C>T (p.Gln118Ter) CDKL5 Mar 13, 2014 MedGen:C2748910,Orphanet:ORPHA3095 Atypical Rett syndrome de novo X 18579917 CCACCTGAGAAAGTAAAAAGCTACATCTATCAGCTAATCAAGGCTATTCACTGGTGCCATA 1057518899 360993 NM_000296.3(PKD1):c.3520C>T (p.Gln1174Ter) PKD1 Jun 11, 2015 Human Phenotype Ontology:HP:0000822,MedGen:C0497247;Human Phenotype Ontology:HP:0000113,MedGen:C0022680 Hypertension;Polycystic kidney dysplasia unknown 16 2111647 GGGGACGGCTCCCCTGTCCTGACCCAGAGCCAGCCGGCTGCCAACCACACCTATGCCTCGA 128626233 26278 NM_004006.2(DMD):c.178C>T (p.Gln60Ter) DMD Sep 01, 2016 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001;MedGen:CN517202 Duchenne muscular dystrophy;not provided germline X 32849736 CTCCTAGACCTCCTCGAAGGCCTGACAGGGCAAAAACTGGTATGTGACTTATTTTTAAGAA 28940896 18047 NM_000226.3(KRT9):c.478C>T (p.Leu160Phe) KRT9 Jul 30, 2003 MedGen:C1840427;MedGen:CN517202 Palmoplantar keratoderma, epidermolytic, with knuckle pads;not provided germline 17 41571515 ACTGCTAATGAGAAGAGCACCATGCAGGAACTCAATTCTCGGCTGGCCTCTTACTTGGATA 886042095 265309 NM_003494.3(DYSF):c.4090C>T (p.Gln1364Ter) DYSF Jan 26, 2016 MedGen:C1850889,OMIM:253601,Orphanet:ORPHA268;MedGen:C1850808,OMIM:254130,Orphanet:ORPHA45448 Limb-girdle muscular dystrophy, type 2B;Miyoshi muscular dystrophy 1 germline 2 71611549 TCCCCCAGCCTCGTGGTAGAGTGTGGGGGCCAGACGGTGCAGTCCTGTGTCATCAGGAACC 137853161 23305 NM_000445.4(PLEC):c.9085C>T (p.Arg3029Ter) PLEC Jan 01, 2005 MedGen:C2677349,OMIM:612138,Orphanet:ORPHA158684 Epidermolysis bullosa simplex with pyloric atresia germline 8 143920817 ATCGACCGCGAGCTCTACCAGCAGCTGCAGCGAGGTGAGCGCTCTGTGCGAGACGTAGCCG -1 486712 NM_001135599.3(TGFB2):c.1042C>T (p.Arg348Cys) TGFB2 Mar 06, 2018 MedGen:C3553762,OMIM:614816 Loeys-Dietz syndrome 4 germline 1 218437368 AACAGAAATGTGCAGGATAATTGCTGCCTACGTCCACTTTACATTGATTTCAAGAGGGATC 875989885 227927 NM_001143763.1(SYCE1):c.721C>T (p.Gln241Ter) SYCE1 May 19, 2016 MedGen:C4310782,OMIM:616947 Premature ovarian failure 12 germline 10 133555706 TGCTGACCACCCCCTACTGGGCCCCCCAGGCAGCTGTTTCAGGAAGAGCACAGGAAGGCTG 149998588 202009 NM_018100.3(EFHC1):c.1612C>T (p.Arg538Ter) EFHC1 Jan 17, 2013 MedGen:CN517202 not provided germline 6 52479759 CTCGCGTCAATTCAGAACCATGTCCGAAAGCGAGAAGCGCCTGCTCCAGAAGCAGAAAGGT -1 481081 NM_001110556.1(FLNA):c.853C>T (p.Arg285Cys) FLNA - MedGen:C1848213,OMIM:300049,OMIM:300537,SNOMED CT:448227009 Periventricular nodular heterotopia 1 inherited X 154367412 TTGCGGCCCAAACTGAACCCGAAGAAAGCCCGTGCCTACGGGCCAGGTGAGGGAGCCCCAC 374703898 214262 NM_024790.6(CSPP1):c.1132C>T (p.Arg378Ter) CSPP1 Apr 05, 2017 MedGen:C3810212,OMIM:615636;MedGen:CN517202 Joubert syndrome 21;not provided germline;unknown 8 67111983 TTCTCATACCACTATCTAGGAGGTGAAGATCGAGAACTTATTCAGAGAAGGAAAGAGAAAT 121918286 17780 NM_004183.3(BEST1):c.598C>T (p.Arg200Ter) BEST1 Jan 01, 2008 MedGen:C3888198,OMIM:611809,Orphanet:ORPHA139455 Bestrophinopathy, autosomal recessive germline 11 61956960 AACCTGTCAATGAAGGCGTGGCTTGGAGGTCGAATCCGGGACCCTATCCTGCTCCAGAGCC 772599282 440092 NM_025132.3(WDR19):c.2563C>T (p.Gln855Ter) WDR19 Jun 01, 2017 MedGen:C0265275,Orphanet:ORPHA474,SNOMED CT:75049004 Jeune thoracic dystrophy paternal 4 39244470 TAGTATTTTAATAATCCTGTCTTATTTTAGCAATTTTCAGAAGCGGCCCAACTGTATGAAA 267607587 77824 NM_170707.3(LMNA):c.736C>T (p.Gln246Ter) LMNA Jan 14, 2013 MedGen:CN517202 not provided germline 1 156134901 GAGTTTGAGAGCCGGCTGGCGGATGCGCTGCAGGAACTGCGGGCCCAGCATGAGGACCAGG 886041361 264847 NM_000444.5(PHEX):c.1543C>T (p.Gln515Ter) PHEX Apr 19, 2017 MedGen:C0733682,OMIM:307800,Orphanet:ORPHA89936,SNOMED CT:82236004;MedGen:CN517202 Familial X-linked hypophosphatemic vitamin D refractory rickets;not provided germline X 22178333 AACGTCCTACAAACTCGCAAGTATTTAGCACAGTCTGATTTCTTCTGGCTAAGAAAAGCCG 121913122 31274 NM_000143.3(FH):c.1027C>T (p.Arg343Ter) FH Sep 18, 2017 MedGen:C0027672,SNOMED CT:699346009;Human Phenotype Ontology:HP:0007437,MedGen:C1708350,OMIM:150800,Orphanet:ORPHA523;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Multiple cutaneous leiomyomas;not provided germline 1 241504123 TGCAGTCTGATGAAGATAGCAAATGATATTCGATTTTTGGGTTCTGGTCCTCGGTCAGGTC 28942073 18917 NM_000521.3(HEXB):c.1250C>T (p.Pro417Leu) HEXB Nov 12, 2016 MedGen:C0036161,OMIM:268800,Orphanet:ORPHA796,SNOMED CT:23849003;MedGen:C1849320;MedGen:C1849321;MedGen:CN517202 Sandhoff disease;Sandhoff disease, adult type;Sandhoff disease, juvenile type;not provided germline;unknown 5 74718804 ATTGCAATTTGTAACGTTAATAGCTTGCGCCGGGCACAATAGTTGAAGTATGGAAAGACAG 587777660 153789 NM_001288767.1(ARMC5):c.541C>T (p.Gln181Ter) ARMC5 Nov 28, 2013 MedGen:C4014803,OMIM:615954 Acth-independent macronodular adrenal hyperplasia 2 germline 16 31459780 CGAGCGGCTGCAGCGGGTTCCGCCCCGTCCCAGGCAGGCCCCGGCTCCGCCCCCTCGTCGG 199422194 34486 NM_018136.4(ASPM):c.9697C>T (p.Arg3233Ter) ASPM Apr 14, 2017 MedGen:C1837501,OMIM:608716;MedGen:CN517202 Primary autosomal recessive microcephaly 5;not provided germline 1 197090328 AAAAATGATTGTACAAAAATTAAAGCTATACGACTAAGTCTTCAAGTTGTTAATAGGGAGA 370340361 461694 NM_000317.2(PTS):c.200C>T (p.Thr67Met) PTS May 24, 2017 MedGen:C0878676,OMIM:261640,Orphanet:ORPHA13 6-pyruvoyl-tetrahydropterin synthase deficiency germline 11 112230639 CTTTGTTTATTCTTTAGATTGACCCTGCTACGGGAATGGTTATGAATCTGGCTGATCTCAA 863224148 212004 NM_000284.3(PDHA1):c.214C>T (p.Arg72Cys) PDHA1 Mar 21, 2017 MedGen:CN517202 not provided germline X 19350033 CTCAAATACTACAGGATGATGCAGACTGTACGCCGAATGGAGTTGAAAGCAGATCAGCTGT 267608659 153536 NM_003159.2(CDKL5):c.2413C>T (p.Gln805Ter) CDKL5 Jan 01, 2018 MedGen:C1839333,OMIM:300672 Early infantile epileptic encephalopathy 2 de novo;germline X 18625164 AATTCCGACAGCCCTGATCTTCTGACGTTGCAGAAATCCATTCATTCTGCTAGCACTCCAA 28934608 26937 NM_000128.3(F11):c.976C>T (p.Arg326Cys) F11 Dec 01, 1999 MedGen:C0015523,OMIM:612416,Orphanet:ORPHA329,SNOMED CT:49762007 Hereditary factor XI deficiency disease germline 4 186280333 GCCTGCCAGAAACTGTGCACCAATGCCGTCCGCTGCCAGTTTTTTACCTATACCCCAGCCC 121912931 32234 NM_001851.4(COL9A1):c.883C>T (p.Arg295Ter) COL9A1 Sep 11, 2014 MedGen:C1852831,OMIM:614134 Stickler syndrome, type 4 germline 6 70281033 TCTCTTTTTCTCCTACCCCTCCAGGGTGACCGAGGTCCTAAGGGCCCCCCGGGCCCCCCGG 876657413 228227 NM_006459.3(ERLIN1):c.763C>T (p.Arg255Ter) ERLIN1 Jan 31, 2014 MedGen:C4284588,OMIM:615681,Orphanet:ORPHA401785 Spastic paraplegia 62, autosomal recessive germline 10 100154922 GTTTATTTGCTAGATGCTGCATTCCTGGCCCGAGAGAAAGCGAAAGCAGATGCTGAATATT 1057519423 362385 NM_017780.3(CHD7):c.1552C>T (p.Gln518Ter) CHD7 - MedGen:C0265354,OMIM:214800,Orphanet:ORPHA138,SNOMED CT:47535005 CHARGE association de novo 8 60742984 TTTCAGCAGTTGCCAACCTGTCCTCCACTGCAGCCTCACCCGGGCTTGCACCACCAGTCTT 587777672 153828 NM_005876.4(SPEG):c.6697C>T (p.Gln2233Ter) SPEG Aug 07, 2014 MedGen:C4014814,OMIM:615959 Myopathy, centronuclear, 5 germline 2 219484160 GTCCGAGCCTCCAAGCCTGCACCACCCCCCCAGGCCCTGCAAACCCTAGCGCTGCCCCTCA 1085307184 414113 NM_001204.6(BMPR2):c.244C>T (p.Q82*) BMPR2 - MedGen:C0152171,OMIM:178600,SNOMED CT:26174007 Primary pulmonary hypertension germline 2 202464976 AAATCAAAAGGGGACATAAATCTTGTAAAACAAGGCAAGTGATACTTTCCTTACCTGAAAT 137854452 31761 NM_000501.3(ELN):c.1324C>T (p.Gln442Ter) ELN Jan 16, 2017 Human Phenotype Ontology:HP:0004381,MedGen:C0003499,OMIM:185500,Orphanet:ORPHA3193,SNOMED CT:268185002;MedGen:CN517202 Supravalvar aortic stenosis;not provided germline 7 74056680 TTTCTTTCTCGTTTCCTTGTAGCCGAAGCTCAGGCAGCAGCTGCCGCCAAGGCTGCCAAGT 779003155 362304 NM_001005463.2(EBF3):c.625C>T (p.Arg209Trp) EBF3 Feb 07, 2017 MedGen:C4310618,OMIM:617330 Hypotonia, ataxia, and delayed development syndrome germline 10 129877779 TTGAAGAATGCAGGCAACCCTCGAGATATGCGGAGATTCCAGGTATACATTTCTCAAAGAC 727503513 172503 NM_001001430.2(TNNT2):c.280C>T (p.Arg94Cys) TNNT2 Aug 21, 2017 MedGen:C1861864,OMIM:115195;MedGen:C0340429,Orphanet:ORPHA217635,SNOMED CT:233878008;MedGen:CN517202 Familial hypertrophic cardiomyopathy 2;Familial restrictive cardiomyopathy;not provided germline 1 201365292 GCGGTCCACCCACAGGACATCCACCGGAAGCGCATGGAGAAGGACCTGAATGAGTTGCAGG 879253845 224626 NM_000255.3(MUT):c.1655C>T (p.Ala552Val) MUT - MedGen:C1855114,OMIM:251000 Methylmalonic aciduria due to methylmalonyl-CoA mutase deficiency germline 6 49444660 CTAGCGGAGATGGAAATATCCTGGCTCTTGCAGTGGATGCATCTCGGGCAAGGTGAAGATA 397514498 48023 NM_004069.4(AP2S1):c.43C>T (p.Arg15Cys) AP2S1 May 09, 2017 MedGen:C1833372,OMIM:600740,Orphanet:ORPHA101050 Hypocalciuric hypercalcemia, familial, type III germline 19 46846103 ATCCTCATCCAGAACCGGGCAGGCAAGACGCGCCTGGCCAAGTGGTACATGCAGTTTGATG 80358472 65877 NM_000059.3(BRCA2):c.1825C>T (p.Gln609Ter) BRCA2 Sep 08, 2016 MedGen:C2675520,OMIM:612555 Breast-ovarian cancer, familial 2 germline 13 32333303 TCTTATAAAGGAAAAAAAATACCGAAAGACCAAAAATCAGAACTAATTAACTGTTCAGCCC 281865110 39630 NM_024747.5(HPS6):c.913C>T (p.Gln305Ter) HPS6 Dec 01, 2009 MedGen:C3888007,OMIM:614075 Hermansky-Pudlak syndrome 6 germline 10 102066387 CACGGTGGTACGCGGGCTGTGGGCACCCTGCAGGAGGCACCTGTAGGCCCGTGGGGGTCTG 587783899 168353 NM_133433.3(NIPBL):c.2260C>T (p.Arg754Ter) NIPBL Feb 08, 2013 MedGen:CN029798,OMIM:122470 Cornelia de Lange syndrome 1 germline 5 36985440 CCTGAAACTCCAAAGCAAAAAAATGAAGGGCGACCTGAAACACCAAAACACAGGCATGACA 750811871 369575 NM_153033.4(KCTD7):c.631C>T (p.Arg211Ter) KCTD7 Mar 24, 2015 MedGen:CN517202 not provided germline 7 66638993 CCCTATGAGTGTCCGCTCCTCAACTCCCTGCGATTTGAGCGGAGTGAGAGTGACGGGCAGC 387907312 45874 NM_006516.2(SLC2A1):c.634C>T (p.Arg212Cys) SLC2A1 Apr 06, 2016 MedGen:C1832855,OMIM:601042,Orphanet:ORPHA53583;MedGen:CN517202 Dystonia 9;not provided germline 1 42929918 ATCGTGCTGCCCTTCTGCCCCGAGAGTCCCCGCTTCCTGCTCATCAACCGCAACGAGGAGA 587783364 167921 NM_003688.3(CASK):c.2470C>T (p.Gln824Ter) CASK Feb 08, 2013 MedGen:C2677903,OMIM:300749,Orphanet:ORPHA163937 Mental retardation and microcephaly with pontine and cerebellar hypoplasia germline X 41531042 AAACTGGAGACCATCCGGAAGATCCACGAGCAGGGGCTGATTGCAATACTGGACGTGGAGC 112371422 107174 NM_000090.3(COL3A1):c.3325C>T (p.Arg1109Ter) COL3A1 May 11, 2017 MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189007569 GAACGTGGAGCTGCTGGCATCAAAGGACATCGAGGATTCCCTGGTAATCCAGGTGCCCCAG 147149459 264886 NM_021628.2(ALOXE3):c.1889C>T (p.Pro630Leu) ALOXE3 Apr 21, 2017 MedGen:CN517202 not provided germline 17 8103390 CCACCCTGAAGACTTACCTAGACACCCTCCCTGAAGTGAACATCAGCTGTAACAACCTCCT 281865269 105671 NM_004183.3(BEST1):c.920C>T (p.Thr307Ile) BEST1 Apr 30, 2015 MedGen:CN517202 not provided germline 11 61959550 CCTTTGGAGAGGATGATGATGATTTTGAGACCAACTGGATTGTCGACAGGAATTTGCAGGT 775836288 442177 NM_000435.2(NOTCH3):c.328C>T (p.Arg110Cys) NOTCH3 Mar 07, 2017 MedGen:CN517202 not provided germline 19 15192389 GGCACCGCCCGATTCTCATGCCGGTGCCCCCGTGGCTTCCGAGGTGAGAGGGGAAGAGTCT 724159971 172085 NM_152778.2(MFSD8):c.1444C>T (p.Arg482Ter) MFSD8 Jan 06, 2017 MedGen:C1838571,OMIM:610951,Orphanet:ORPHA228366;MedGen:CN517202 Ceroid lipofuscinosis neuronal 7;not provided germline;maternal 4 127920743 ATCAGCCAAGTGTATGCTCACTGGGGACCACGATGGGCATTCAGCCTGGTGTGTGGAATAA 28940281 17565 NM_014629.3(ARHGEF10):c.995C>T (p.Thr332Ile) ARHGEF10 Aug 26, 2011 MedGen:C1842357,OMIM:608236,Orphanet:ORPHA140481 Slowed nerve conduction velocity, autosomal dominant germline 8 1882669 AGAAGCTCGTGAAGGCCGCGAAGGACGGCACCAAGGACGGGCTGGAGAGGACCAGGGCAGC 80338963 23582 NM_005359.5(SMAD4):c.1081C>T (p.Arg361Cys) SMAD4 Jun 16, 2016 Human Phenotype Ontology:HP:0030078,MeSH:C538231,MedGen:C0152013;MedGen:C0278701;Human Phenotype Ontology:HP:0011459,MedGen:C0152018,Orphanet:ORPHA70482;MeSH:D015179,MedGen:CN236642;MedGen:C0027672,SNOMED CT:699346009;na;MedGen:C0345893,OMIM:174900,Orphanet:ORPHA329971,SNOMED CT:9273005;MedGen:C1832942,OMIM:175050;Human Phenotype Ontology:HP:0100013,MeSH:D001943,MedGen:C1458155,Orphanet:ORPHA180250,SNOMED CT:126926005;Human Phenotype Ontology:HP:0006725,MedGen:C0281361;MeSH:C535575,MedGen:C1168401,OMIM:275355,Orphanet:ORPHA67037;MeSH:D002583,MedGen:CN236667;MedGen:CN517202 Adenocarcinoma of lung;Adenocarcinoma of stomach;Carcinoma of esophagus;Colorectal Neoplasms;Hereditary cancer-predisposing syndrome;JP, JP/HHT, and HHT;Juvenile polyposis syndrome;Juvenile polyposis/hereditary hemorrhagic telangiectasia syndrome;Neoplasm of the breast;Pancreatic adenocarcinoma;Squamous cell carcinoma of the head and neck;Uterine cervical neoplasms;not provided germline;somatic;unknown 18 51065548 GATGGATACGTGGACCCTTCTGGAGGAGATCGCTTTTGTTTGGGTCAACTCTCCAATGTCC 28933973 28750 NM_001083116.2(PRF1):c.673C>T (p.Arg225Trp) PRF1 Jun 14, 2016 MedGen:C0272199,SNOMED CT:398250003;MedGen:C1863727,OMIM:603553 Familial hemophagocytic lymphohistiocytosis;Hemophagocytic lymphohistiocytosis, familial, 2 germline 10 70599048 CTTATCTCCAACTACGGCACCCACTTCATCCGGGCTGTGGAGCTGGGTGGCCGCATATCGG 119472027 19102 NM_014080.4(DUOX2):c.2056C>T (p.Gln686Ter) DUOX2 Jul 11, 2002 MedGen:C1846632,OMIM:607200 Thyroid dyshormonogenesis 6 germline 15 45106217 AACAGGCATCTCACTGTGCTCCGTGTGGTCCAGCTGCAGCCTCTGCAGCAGGTCAACCTCA 28940585 17437 NM_000048.3(ASL):c.283C>T (p.Arg95Cys) ASL Dec 01, 1990 MedGen:C0268547,OMIM:207900,Orphanet:ORPHA23,SNOMED CT:41013004 Argininosuccinate lyase deficiency germline 7 66082443 GATGAGGACATCCACACAGCCAATGAGCGCCGCCTGAAGGTACGACCCCTGGAGCCCCACC 398123991 100570 NM_004006.2(DMD):c.5554C>T (p.Gln1852Ter) DMD - MedGen:C3668940,OMIM:302045 Dilated cardiomyopathy 3B germline X 32345975 AGAAAGCGAGAGGAAATAAAGATAAAACAGCAGCTGTTACAGACAAAACATAATGCTCTCA 758595075 248763 NM_013328.3(PYCR2):c.595C>T (p.Arg199Trp) PYCR2 Sep 16, 2016 MedGen:C4225332,OMIM:616420 Leukodystrophy, hypomyelinating, 10 germline 1 225921590 GCTGATGGTGGGGTGAAGATGGGTTTGCCACGGCGCCTGGCAATCCAACTCGGGGCCCAGG 74315322 19689 NM_006118.3(HAX1):c.568C>T (p.Gln190Ter) HAX1 Jan 01, 2007 MedGen:CN032247,OMIM:610738 Severe congenital neutropenia 3, autosomal recessive germline 1 154275165 CATCTCTCTGCTCTTCCAGATCTTGATTCCCAGGTTTCCCAGGAGGGTCTTGGCCCGGTTC 1057517715 360672 NM_000390.3(CHM):c.1213C>T (p.Gln405Ter) CHM Mar 03, 2016 MedGen:CN517202 not provided germline X 85911292 GGTGGAATTTATTGTCTTCGCCATTCAGTACAGTGCCTTGTAGTGGACAAAGAATCCAGAA 757222354 178792 NM_000081.3(LYST):c.5506C>T (p.Arg1836Ter) LYST Jan 15, 2015 MedGen:C0007965,OMIM:214500,Orphanet:ORPHA167,SNOMED CT:111396008 Chédiak-Higashi syndrome germline 1 235775041 AGCTGTGAAGAAACTCAAGCATTAGCACTGCGAGTTATACTCTCATTAATTAAATACAACC 121434220 18075 NM_000051.3(ATM):c.7327C>T (p.Arg2443Ter) ATM Jul 31, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Ataxia-telangiectasia syndrome;Hereditary cancer-predisposing syndrome;not provided germline;unknown 11 108330233 TTCTATGCAAGATACACAGTAAAGGTTCAGCGAGAGCTGGAGTTGGATGAATTAGCCCTGC 374470794 191317 NM_000152.4(GAA):c.1802C>T (p.Ser601Leu) GAA Nov 19, 2014 MedGen:C0017921,OMIM:232300,Orphanet:ORPHA365,SNOMED CT:124462004,SNOMED CT:237967002 Glycogen storage disease, type II germline 17 80112625 GGGGGACACGCCCATTTGTGATCTCCCGCTCGACCTTTGCTGGCCACGGCCGATACGCCGG 1064794261 410503 NM_001127221.1(CACNA1A):c.5396C>T (p.Ser1799Leu) CACNA1A Feb 17, 2017 MedGen:CN517202 not provided germline 19 13231717 TTTACTTTGTTTCCTTCATCTTCCTCTGCTCGTTTCTGGTGAGTCTGTGGACACTGTGAGG 121964959 27050 NM_000532.4(PCCB):c.1228C>T (p.Arg410Trp) PCCB Dec 13, 2016 Human Phenotype Ontology:HP:0003353,MedGen:C0268579,OMIM:606054,Orphanet:ORPHA35 Propionic acidemia germline 3 136327184 GGCACAGCACAGGAATACGGGGGCATCATCCGGCATGGTGCCAAGCTTCTCTACGCATTTG 1057519301 361814 NM_020738.3(KIDINS220):c.4096C>T (p.Gln1366Ter) KIDINS220 Jan 11, 2017 MedGen:C4284592,OMIM:617296 Spastic paraplegia, intellectual disability, nystagmus, and obesity germline 2 8731940 AGAACCCCAAGTCTTTCGAGTCTCAATTCCCAGGATTCCAGTATTGAAATTTCAAAGCTTA 886039526 259901 NM_017780.3(CHD7):c.550C>T (p.Gln184Ter) CHD7 Dec 18, 2015 MedGen:CN517202 not provided germline 8 60741982 CCGTCGGGGCCCCCTGCACAGGGCCACCCTCAGCACATGCAGCAGATGGGCAGCTATATGG 104894881 26066 NM_198270.3(NHS):c.115C>T (p.Gln39Ter) NHS Jan 01, 2005 MedGen:C0796085,OMIM:302350,SNOMED CT:445257004 Nance-Horan syndrome germline X 17375872 GGAGGCAGCGCTGAGCCGCCGCCGCCCTTGCAGCCGCCGGGCCGGAGGGACCTGGACGAGG 104894780 26637 NM_178151.2(DCX):c.574C>T (p.Arg192Trp) DCX Dec 22, 2016 Human Phenotype Ontology:HP:0002282,MedGen:C0008519;MedGen:C1848199,OMIM:300067,Orphanet:ORPHA2148;MedGen:C1848070;MedGen:CN517202 Heterotopia;Lissencephaly, X-linked;Subcortical laminar heterotopia, X-linked;not provided germline X 111401121 GTTACCATCATCCGCAGTGGGGTGAAGCCTCGGAAGGCTGTGCGTGTGCTTCTGAACAAGA 5030868 25407 NM_000402.4(G6PD):c.653C>T (p.Ser218Phe) G6PD Sep 11, 2017 MedGen:C2720289,OMIM:300908,Orphanet:ORPHA466026;MedGen:C2720289,OMIM:300908,Orphanet:ORPHA466026;MedGen:C1851319,OMIM:134700;na;na;na;MedGen:C0017758,Orphanet:ORPHA362;MedGen:C1970028,OMIM:611162;MedGen:CN517202 Anemia, nonspherocytic hemolytic, due to G6PD deficiency;Anemia, nonspherocytic hemolytic, due to G6PD deficiency;Favism, susceptibility to;G6PD CAGLIARI;G6PD MEDITERRANEAN;G6PD SASSARI;Glucose 6 phosphate dehydrogenase deficiency;Susceptibility to malaria;not provided germline;paternal;unknown X 154534419 AGAGCTCTGACCGGCTGTCCAACCACATCTCCTCCCTGTTCCGTGAGGACCAGATCTACCG 63750706 95772 NM_000249.3(MLH1):c.62C>T (p.Ala21Val) MLH1 Nov 24, 2015 MedGen:C2936783,OMIM:120435 Lynch syndrome I germline 3 36993609 TGGACGAGACAGTGGTGAACCGCATCGCGGCGGGGGAAGTTATCCAGCGGCCAGCTAATGC 1060501109 397642 NM_016169.3(SUFU):c.436C>T (p.Arg146Ter) SUFU Jun 13, 2017 MedGen:C0004779,OMIM:109400,Orphanet:ORPHA377,SNOMED CT:69408002;Human Phenotype Ontology:HP:0002885,MeSH:D008527,MedGen:C0025149,OMIM:155255,Orphanet:ORPHA616;MedGen:CN517202 Gorlin syndrome;Medulloblastoma;not provided germline 10 102550088 TGGCCCGCAGAGTTAATGCAGGGCTTGGCACGATACGTGTTCCAGTCAGGTAGGAGGCCAG 754130052 263458 NM_080675.3(SUN5):c.1066C>T (p.Arg356Cys) SUN5 Nov 07, 2016 MedGen:C4310674,OMIM:617187 Spermatogenic failure 16 germline 20 32983868 TGGGGGAACCCAGGCTTCACTTGCCTGTACCGCGTGCGAGTGCATGGCTCTGTGGCCCCGC 758264018 467220 NM_017534.5(MYH2):c.3331C>T (p.Gln1111Ter) MYH2 Jul 03, 2017 MedGen:C1854106,OMIM:605637 Inclusion body myopathy 3 germline 17 10529185 GAAGATGAACAGGCACTTGGCATTCAATTGCAGAAGAAAATTAAAGAATTGCAAGTAAGTA 377767332 36149 NM_005359.5(SMAD4):c.538C>T (p.Gln180Ter) SMAD4 Dec 04, 2012 MedGen:C0345893,OMIM:174900,Orphanet:ORPHA329971,SNOMED CT:9273005 Juvenile polyposis syndrome not provided 18 51054864 CCATCGTTGTCCACTGAAGGACATTCAATTCAAACCATCCAGCATCCACCAAGTAATCGTG 72554636 209214 NM_000052.6(ATP7A):c.1225C>T (p.Arg409Ter) ATP7A Feb 08, 2013 MedGen:C0022716,OMIM:309400,Orphanet:ORPHA565,SNOMED CT:59178007 Menkes kinky-hair syndrome germline X 77989847 ATATCAAAAAAGCCAGGTGTAAAATCCATACGAGTCTCCCTTGCAAATAGCAATGGGACTG 121918324 23735 NM_001122764.2(PPOX):c.175C>T (p.Arg59Trp) PPOX Feb 14, 2013 MedGen:C0162532,OMIM:176200,Orphanet:ORPHA79473,SNOMED CT:58275005 Variegate porphyria germline 1 161167187 CCTAATGGTGCTATCTTTGAGCTTGGACCTCGGGGAATTAGGCCAGCGGGAGCCCTAGGGG 80357063 131091 NM_007294.3(BRCA1):c.2309C>T (p.Ser770Leu) BRCA1 Jun 06, 2005 MedGen:C2676676,OMIM:604370 Breast-ovarian cancer, familial 1 germline 17 43093222 CTGAAAGATCTGTAGAGAGTAGCAGTATTTCATTGGTACCTGGTACTGATTATGGCACTCA 797045445 207864 NM_000076.2(CDKN1C):c.694C>T (p.Gln232Ter) CDKN1C Jan 09, 2015 MedGen:C0004903,OMIM:130650,Orphanet:ORPHA116,SNOMED CT:81780002 Beckwith-Wiedemann syndrome germline 11 2884796 GAGAGCGCCGAGCAGGGCGCGAACCAGGGGCAGCGCGGCCAGGAGCCTCTCGCTGACCAGC 28934874 27409 NM_000546.5(TP53):c.451C>T (p.Pro151Ser) TP53 Sep 13, 2017 Human Phenotype Ontology:HP:0030078,MeSH:C538231,MedGen:C0152013;MedGen:C0278701;MeSH:D003528,MedGen:C0010606;MedGen:C0858252,Orphanet:ORPHA213528;Human Phenotype Ontology:HP:0011459,MedGen:C0152018,Orphanet:ORPHA70482;MeSH:D015179,MedGen:CN236642;MedGen:C2239176,OMIM:114550,Orphanet:ORPHA88673,SNOMED CT:187769009,SNOMED CT:25370001;MedGen:C0027672,SNOMED CT:699346009;MeSH:C562393,MedGen:C0151779,SNOMED CT:93655004;MedGen:C0153574,Orphanet:ORPHA213569;Human Phenotype Ontology:HP:0006775,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:ORPHA29073,SNOMED CT:109989006,SNOMED CT:55921005;Human Phenotype Ontology:HP:0030692,MeSH:D001932,MedGen:C0006118,SNOMED CT:126952004;Human Phenotype Ontology:HP:0100013,MeSH:D001943,MedGen:C1458155,Orphanet:ORPHA180250,SNOMED CT:126926005;MedGen:C0279663;Human Phenotype Ontology:HP:0006725,MedGen:C0281361;Human Phenotype Ontology:HP:0030359,MedGen:C0149782;MeSH:C535575,MedGen:C1168401,OMIM:275355,Orphanet:ORPHA67037;Human Phenotype Ontology:HP:0006740,MedGen:C0279680;MedGen:C0280630;MedGen:CN517202 Adenocarcinoma of lung;Adenocarcinoma of stomach;Adenoid cystic carcinoma;Breast adenocarcinoma;Carcinoma of esophagus;Colorectal Neoplasms;Hepatocellular carcinoma;Hereditary cancer-predisposing syndrome;Malignant melanoma of skin;Malignant neoplasm of body of uterus;Multiple myeloma;Neoplasm of brain;Neoplasm of the breast;Ovarian Serous Cystadenocarcinoma;Pancreatic adenocarcinoma;Squamous cell carcinoma of lung;Squamous cell carcinoma of the head and neck;Transitional cell carcinoma of the bladder;Uterine Carcinosarcoma;not provided germline;somatic 17 7675161 TGCCCTGTGCAGCTGTGGGTTGATTCCACACCCCCGCCCGGCACCCGCGTCCGCGCCATGG 121918321 21769 NM_003165.3(STXBP1):c.1162C>T (p.Arg388Ter) STXBP1 Aug 11, 2017 MedGen:C0393706,Orphanet:ORPHA1934;MedGen:C2677326,OMIM:612164;MedGen:CN517202 Early infantile epileptic encephalopathy;Early infantile epileptic encephalopathy 4;not provided germline 9 127675855 GCTGAGGGAGAGAAGATCAAGGACCCTATGCGAGCCATCGTCCCCATTCTGCTGGATGCCA 121913585 29216 NM_000530.7(MPZ):c.188C>T (p.Ser63Phe) MPZ Dec 01, 1995 MedGen:C0270912,OMIM:118200,Orphanet:ORPHA101082,SNOMED CT:42986003 Charcot-Marie-Tooth disease, demyelinating, type 1b germline 1 161307304 GGTCCAGTGAGTGGGTCTCAGATGACATCTCCTTCACCTGGCGCTACCAGCCCGAAGGGGG 80356499 34145 NM_001457.3(FLNB):c.602C>T (p.Ala201Val) FLNB Oct 09, 2008 MedGen:C3668942,OMIM:108721,Orphanet:ORPHA56305 Atelosteogenesis type 3 not provided 3 58078777 CGCAGAAGCCTGTGGATAATGCACGAGAAGCCATGCAGCAGGCAGATGACTGGCTGGGTGT 1135401761 424625 NM_001029882.3(AHDC1):c.3814C>T (p.Arg1272Ter) AHDC1 Aug 01, 2017 MedGen:C4014419,OMIM:615829,Orphanet:ORPHA412069 Xia-Gibbs syndrome de novo 1 27548302 TCCAAACGGAGCACTGGGCCCCGGCAGCCGCGAGGTGGACGGGGCGGTGGGGCCTGCTCAG 137852858 17699 NM_198428.2(BBS9):c.1063C>T (p.Gln355Ter) BBS9 Dec 01, 2005 MedGen:C1859567,OMIM:615986 Bardet-Biedl syndrome 9 germline 7 33336487 ATAGTCACTCTGAGTGATGATGGTCACTTGCAGTGTTCATACCTGGGGACAGATCCTTCTC 104894110 22025 NM_004473.3(FOXE1):c.194C>T (p.Ala65Val) FOXE1 Mar 01, 2011 MedGen:C1855794,OMIM:241850,Orphanet:ORPHA1226 Bamforth syndrome germline 9 97854108 CCTACAGCTACATCGCGCTCATCGCCATGGCCATCGCGCACGCGCCCGAGCGCCGCCTCAC 201822162 264578 NM_018451.4(CENPJ):c.40C>T (p.Gln14Ter) CENPJ Oct 06, 2016 MedGen:CN517202 not provided germline 13 24912986 ATGCCAACCTCTTCAGAGTTAAACAGTGGGCAGAACTTCCTAACCCAGTGGATGACCAATC 768713596 210257 NM_005902.3(SMAD3):c.277C>T (p.Arg93Ter) SMAD3 Apr 22, 2017 MedGen:CN118826,Orphanet:ORPHA91387;MedGen:CN517202 Thoracic aortic aneurysm and aortic dissection;not provided germline 15 67164965 CTCCCTCATGTCATCTACTGCCGCCTGTGGCGATGGCCAGACCTGCACAGCCACCACGAGC 398124523 102361 NM_144997.5(FLCN):c.1060C>T (p.Gln354Ter) FLCN Dec 27, 2012 MedGen:CN517202 not provided germline 17 17219021 CCAGTCTTCAAGTCCCTCCGGCACATGAGGCAGGTAGGCGGCAGGGGCACAGCGCATCAGG 868369541 414292 NM_001204.6(BMPR2):c.1348C>T (p.Q450*) BMPR2 - MedGen:C0152171,OMIM:178600,SNOMED CT:26174007 Primary pulmonary hypertension germline 2 202542382 GTTGGAAACCATCCCACTTTTGAGGATATGCAGGTTCTCGTGTCTAGGGAAAAACAGAGAC 1060502581 392462 NM_001204.6(BMPR2):c.961C>T (p.Arg321Ter) BMPR2 Aug 30, 2016 MedGen:C0152171,OMIM:178600,SNOMED CT:26174007 Primary pulmonary hypertension germline 2 202520195 GGACTGGCTTATCTTCACACAGAATTACCACGAGGAGGTAAGATAGTCAATAGATGAAATT 373458753 273616 NM_000026.3(ADSL):c.907C>T (p.Arg303Cys) ADSL Jul 26, 2016 MedGen:C0268126,OMIM:103050,Orphanet:ORPHA46,SNOMED CT:15285008 Adenylosuccinate lyase deficiency germline 22 40361532 CCATATAAGCGGAATCCCATGCGTTCAGAACGTTGCTGCAGTCTTGCCCGCCACCTGATGA 386834039 71249 NM_017739.3(POMGNT1):c.931C>T (p.Arg311Ter) POMGNT1 Jul 20, 2017 MedGen:C0457133,OMIM:253280,Orphanet:ORPHA588,SNOMED CT:277950001;MedGen:CN517202 Muscle eye brain disease;not provided germline 1 46193874 AATGTGCCTGTGGCTGTCATTGCAGGGAACCGACCCAATTACCTGTACAGGTAAGCCTGGG 121909105 22313 NM_005603.5(ATP8B1):c.1804C>T (p.Arg602Ter) ATP8B1 Oct 15, 2004 MedGen:C0268312,OMIM:211600,Orphanet:ORPHA172,SNOMED CT:74162007 Progressive intrahepatic cholestasis germline 18 57674849 GCCATTTTGGACTTCAACAGTGACCGGAAGCGAATGTCTATCATTGGTAAGTCCCCCTCAG 193922916 33145 NM_000484.3(APP):c.2018C>T (p.Ala673Val) APP Mar 13, 2009 Human Phenotype Ontology:HP:0002511,MedGen:C0002395,OMIM:104300,SNOMED CT:26929004 Alzheimer's disease germline 21 25897619 CGGAGGAGATCTCTGAAGTGAAGATGGATGCAGAATTCCGACATGACTCAGGATATGAAGT 397515450 75105 NM_005592.3(MUSK):c.2180C>T (p.Ala727Val) MUSK Jun 15, 2010 MedGen:C4225368,OMIM:616325 Myasthenic syndrome, congenital, 9, associated with acetylcholine receptor deficiency germline 9 110800558 CAGAACGTAAGTTTGTTCACCGAGATTTAGCCACCAGGAACTGCCTGGTGGGCGAGAACAT 80338856 34127 NM_001360.2(DHCR7):c.724C>T (p.Arg242Cys) DHCR7 May 26, 2017 MedGen:C0175694,OMIM:270400,Orphanet:ORPHA818,SNOMED CT:43929004;MedGen:CN517202 Smith-Lemli-Opitz syndrome;not provided germline;unknown 11 71438986 TGGTTTGACTTCAAGCTGTTCTTCAATGGGCGCCCCGGGATCGTCGCCTGGACCCTCATCA 794726710 187772 NM_001165963.1(SCN1A):c.3637C>T (p.Arg1213Ter) SCN1A Sep 14, 2017 Human Phenotype Ontology:HP:0001250,MedGen:C0036572;MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002;MedGen:CN517202 Seizures;Severe myoclonic epilepsy in infancy;not provided de novo;germline 2 166013812 CAATGGTGGAACCTGAGAAGGACGTGTTTCCGAATAGTTGAACATAACTGGTTTGAGACCT 121912758 32813 NM_000342.3(SLC4A1):c.1936C>T (p.Arg646Trp) SLC4A1 Jan 01, 2000 na SWANN BLOOD GROUP ANTIGEN germline 17 44254617 GATGGCTTCAAGGTGTCCAACTCCTCAGCCCGGGGCTGGGTCATCCACCCACTGGGCTTGC 587777691 165514 NM_004447.5(EPS8):c.88C>T (p.Gln30Ter) EPS8 Apr 17, 2014 MedGen:C3892050,OMIM:615974 Deafness, autosomal recessive 102 germline 12 15681274 AGTGGCTACGGATCATCACCTACCTTTTCCCAGACGGACAGAGAACATGGTTCAAAAACAA 199473673 39961 NM_025099.5(CTC1):c.680C>T (p.Ala227Val) CTC1 Mar 09, 2012 MedGen:C2677299,OMIM:612199 Cerebroretinal microangiopathy with calcifications and cysts 1 germline 17 8237487 ACAAGCTCAGAGGTGTGCAGCGAAACCTGGCTGGGAGTCTAGTTCGATTGAGTGCTCTGGT 367809750 264180 NM_022455.4(NSD1):c.1288C>T (p.Gln430Ter) NSD1 Oct 11, 2016 MedGen:CN517202 not provided germline 5 177209687 AAATGGGAAGCCAGTGTTGGACTTGCAGAACAGTATGATGTTCCCAAGGGGTCAAAGAACC 121912573 23610 NM_000901.4(NR3C2):c.2453C>T (p.Ser818Leu) NR3C2 Nov 01, 2006 MedGen:C1449842,OMIM:177735,Orphanet:ORPHA171871 Pseudohypoaldosteronism type 1 autosomal dominant germline 4 148152526 GTCTATCATCATTTGCCTTGAGCTGGAGATCGTACAAACATACGAACAGCCAATTTCTCTA 387907152 40206 NM_001256714.1(DNAAF3):c.469C>T (p.Arg157Ter) DNAAF3 Sep 03, 2015 MedGen:C1847554,OMIM:606763;MedGen:C0022521,OMIM:244400,Orphanet:ORPHA98861,SNOMED CT:42402006 Ciliary dyskinesia, primary, 2;Kartagener syndrome germline 19 55165427 GTGCTGGAGAATAATCTGGAAGCTGTGGCCCGACACATGCTGATCTTCAGCCTAGCCCTGG 387907273 45738 NM_015631.5(TCTN3):c.1327C>T (p.Gln443Ter) TCTN3 Aug 10, 2012 MedGen:C0406727,OMIM:258860,SNOMED CT:239031000 Orofacial-digital syndrome IV germline 10 95682776 AGGTTGAAGAAGGCAGACTGCAGCCACTTGCAGCAGGAGATTTATCAGACTCTTCATGGAA 121912524 29431 NM_000233.3(LHCGR):c.1660C>T (p.Arg554Ter) LHCGR Feb 22, 1996 MedGen:C0266432,OMIM:238320,SNOMED CT:56212008;MedGen:C2673498 Leydig cell agenesis;Luteinizing hormone resistance, female germline 2 48688137 GCTTGCTACATTAAAATTTATTTTGCAGTTCGAAACCCAGAATTAATGGCTACCAATAAAG 137852860 16888 NM_024728.2(SUGCT):c.895C>T (p.Arg299Trp) SUGCT Apr 21, 2015 MedGen:C0342873,OMIM:231690,Orphanet:ORPHA35706,SNOMED CT:238070003;MedGen:CN517202 Glutaryl-CoA oxidase deficiency;not provided germline 7 40459197 AGAAAAGAGCTTATTAAAATATTATCTGAACGGTAAGTTTGGATGTTGTATTCATCCATTT 150766139 190112 NM_002528.6(NTHL1):c.268C>T (p.Gln90Ter) NTHL1 Jun 01, 2015 MedGen:C4225157,OMIM:616415,Orphanet:ORPHA454840 Familial adenomatous polyposis 3 unknown 16 2046238 GAGCCCCTCAAGGTGCCAGTCTGGGAGCCCCAGGACTGGCAGCAACAGCTGGTCAACATCC 397509171 69858 NM_007294.3(BRCA1):c.4399C>T (p.Gln1467Ter) BRCA1 Oct 18, 2016 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome germline 17 43076573 TCACAGAAAAGTAGTGAATACCCTATAAGCCAGAATCCAGAAGGCCTTTCTGCTGACAAGT 886040996 262661 NM_017780.3(CHD7):c.6148C>T (p.Arg2050Ter) CHD7 Sep 05, 2016 MedGen:C0265354,OMIM:214800,Orphanet:ORPHA138,SNOMED CT:47535005 CHARGE association germline 8 60852873 TCCTCCATAATTGAGCCGATCACAGAGGAGCGAGCCTCTCGAACTCTGTACCGCATTGAGC 886039331 260115 NM_004380.2(CREBBP):c.6010C>T (p.Arg2004Ter) CREBBP Feb 21, 2016 MedGen:CN517202 not provided germline 16 3729037 CAGATGGCCCCCGTGAGCCTGAATGTGCCCCGACCCAACCAGGTGAGCGGGCCCGTCATGC 199475575 108459 NM_000277.2(PAH):c.526C>T (p.Arg176Ter) PAH Aug 04, 2017 MedGen:C0031485,OMIM:261600,Orphanet:ORPHA716,SNOMED CT:154735006;MedGen:CN517202 Phenylketonuria;not provided germline;unknown 12 102855316 TGCCTGTATTCTAGTGGGCAGCCCATCCCTCGAGTGGAATACATGGAGGAAGAAAAGAAAA 769931291 406664 NM_001135243.1(TCOF1):c.2140C>T (p.Gln714Ter) TCOF1 Mar 06, 2017 MedGen:CN517202 not provided germline 5 150376328 GAGAAGACAGGTCTTGCAGTAACCGTGGGACAGGTGAGGCCTGTGTTTTCTGGGCGGGCCT 794726993 190826 NM_004006.2(DMD):c.1093C>T (p.Gln365Ter) DMD Aug 09, 2016 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Becker muscular dystrophy;Duchenne muscular dystrophy germline X 32645020 CTTCTTTCTGCTGAGGACACATTGCAAGCACAAGGAGAGATTTCTAATGATGTGGAAGTGG 387906958 39581 NM_016013.3(NDUFAF1):c.631C>T (p.Arg211Cys) NDUFAF1 Oct 01, 2011 MedGen:C1838979,OMIM:252010 Mitochondrial complex I deficiency germline 15 41394987 GATTGGTCCCAGTTCAATACTCTGTATCTCCGTGTACGTGGGGATGGTCGGCCTTGGATGG 200002200 263938 NM_002016.1(FLG):c.6109C>T (p.Arg2037Ter) FLG Dec 15, 2016 MedGen:CN517202 not provided germline 1 152308777 GCTTCATCTGCAGTCAGAGACAGTGGACACCGAGGGTACAGTGGTAGTCAGGCCAGTGACA 72558417 103167 NM_000531.5(OTC):c.626C>T (p.Ala209Val) OTC - MedGen:CN517202 not provided unknown X 38403703 ATATCCTGCACTCCATCATGATGAGCGCAGCGAAATTCGGAATGCACCTTCAGGCAGCTAC 137852767 23782 NM_004168.3(SDHA):c.1571C>T (p.Ala524Val) SDHA Feb 10, 2017 MedGen:C1855008,OMIM:252011,Orphanet:ORPHA3208;MedGen:CN517202 Mitochondrial complex II deficiency;not provided germline 5 251011 TTGTGCCACAGTCAATGCAAAATCATGCTGCCGTGTTCCGTGTGGGAAGCGTGTTGCAAGA 62625303 68931 NM_007294.3(BRCA1):c.1471C>T (p.Gln491Ter) BRCA1 Jul 05, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome germline 17 43094060 CTAATTATAGGAGCATTTGTTACTGAGCCACAGATAATACAAGAGCGTCCCCTCACAAATA 397517323 55085 NM_022124.5(CDH23):c.3481C>T (p.Arg1161Ter) CDH23 Jun 16, 2015 MedGen:C1832845,OMIM:601067 Usher syndrome, type 1D germline 10 71725422 CGGATCCATGTCAGCAATGGGCTCCTGATGCGAGGGCCCCGGCCCCTGGACCGGGAGCGGA 398123059 76992 NM_012160.4(FBXL4):c.1555C>T (p.Gln519Ter) FBXL4 Aug 10, 2017 MedGen:C3809592,OMIM:615471,Orphanet:ORPHA369897 Mitochondrial DNA depletion syndrome 13 (encephalomyopathic type) germline 6 98875562 GAGCTTGACCTTGGCTGGTGCCCAACTCTGCAGAGCAGCACCGGGTGCTTCACCAGACTGG 137852508 45052 NM_000206.2(IL2RG):c.865C>T (p.Arg289Ter) IL2RG Sep 29, 2016 MedGen:C1279481,OMIM:300400,SNOMED CT:203592006;MedGen:CN517202 X-linked severe combined immunodeficiency;not provided germline X 71108336 CCCTCTTTCTCCCCTGTCAGGACGATGCCCCGAATTCCCACCCTGAAGAACCTAGAGGATC 587782130 151660 NM_002485.4(NBN):c.1474C>T (p.Gln492Ter) NBN Jul 13, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0398791,OMIM:251260,Orphanet:ORPHA647,SNOMED CT:234638009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Microcephaly, normal intelligence and immunodeficiency;not provided germline 8 89953615 AGAATAGAAACGTCTTGTTCTCTTTTAGAACAAACACAACCTGCTACACCCTCATTGTGGA 137854539 30992 NM_001077488.3(GNAS):c.347C>T (p.Pro116Leu) GNAS Oct 01, 2001 Human Phenotype Ontology:HP:0000852,MedGen:C0033806,OMIM:103580,Orphanet:ORPHA97593;MedGen:C0033835,OMIM:612463,Orphanet:ORPHA79445,SNOMED CT:237659007 Pseudohypoparathyroidism type 1A;Pseudopseudohypoparathyroidism germline 20 58903703 CCATTGTGGCCGCCATGAGCAACCTGGTGCCCCCCGTGGAGCTGGCCAACCCCGAGAACCA 121908470 20840 NM_139025.4(ADAMTS13):c.587C>T (p.Thr196Ile) ADAMTS13 Jan 15, 2004 MedGen:C1268935,OMIM:274150,Orphanet:ORPHA93583,SNOMED CT:373420004 Upshaw-Schulman syndrome germline 9 133426246 CTGATGGTAACCGGCAGGTGCGGGGCGTCACCCAGCTGGGCGGTGCCTGCTCCCCAACCTG 80356590 34683 NM_194248.2(OTOF):c.2122C>T (p.Arg708Ter) OTOF Mar 26, 2012 MedGen:C1832828,OMIM:601071;MedGen:CN043648,Orphanet:ORPHA87884 Deafness, autosomal recessive 9;Nonsyndromic hearing loss and deafness germline 2 26479356 AGGAACTACTTCCATCTGCCCTACCTGGAGCGAAAGCCCTGCATCTACATCAAGAGCTGGT 1064796854 411338 NM_001039590.2(USP9X):c.7207C>T (p.Gln2403Ter) USP9X Mar 16, 2017 MedGen:CN517202 not provided germline X 41229398 GCTCTATTTAGTAACTGTCCTGTTGCTTACCAAATCCTGCAGGTGAGGATTTTTTTCTTAT 61750145 105172 NM_000350.2(ABCA4):c.4457C>T (p.Pro1486Leu) ABCA4 Nov 18, 2016 MeSH:C535804,MedGen:C1855465,OMIM:248200;MedGen:CN517202 Stargardt disease 1;not provided germline 1 94029527 AGCAGAAATGGACACAGGTCAACCCTTCACCATCCTGCAGGTGCAGCACCAGGGAGAAGCT 397509299 70305 NM_007294.3(BRCA1):c.55C>T (p.Gln19Ter) BRCA1 Oct 18, 2016 MedGen:C2676676,OMIM:604370 Breast-ovarian cancer, familial 1 germline 17 43124042 GAAGAAGTACAAAATGTCATTAATGCTATGCAGAAAATCTTAGAGTGTCCCATCTGGTAAG 192919234 208816 NM_020461.3(TUBGCP6):c.895C>T (p.Arg299Ter) TUBGCP6 Dec 12, 2014 MedGen:CN233046 Microcephaly and chorioretinopathy with or without mental retardation germline 22 50240214 TATGAGGCCAGCAAGCGGAGGTGCTGGGAGCGAGTTGGCTGGTGTGTGCCCTTCTTTGCCT 128620187 26383 NM_000061.2(BTK):c.37C>T (p.Arg13Ter) BTK Aug 18, 2011 MedGen:C0221026,OMIM:300755,Orphanet:ORPHA47,SNOMED CT:65880007 X-linked agammaglobulinemia germline X 101375248 GCAGTGATTCTGGAGAGCATCTTTCTGAAGCGATCCCAACAGAAAAAGAAAACATCACCTC 121909595 31976 NM_006891.3(CRYGD):c.43C>T (p.Arg15Cys) CRYGD Sep 01, 2007 Human Phenotype Ontology:HP:0010926,MedGen:C1861832,OMIM:115700 Cataract 4 germline 2 208124321 ACCCTCTACGAGGACCGGGGCTTCCAGGGCCGCCACTATGAATGCAGCAGCGACCACCCCA 759031330 224594 NM_005957.4(MTHFR):c.1033C>T (p.Arg345Cys) MTHFR Dec 03, 2004 MedGen:C1856058,OMIM:236250 Homocysteinemia due to MTHFR deficiency germline 1 11794862 CTCAATTCTCTGTCCCCATCCTCACCCAGGCGTCCCCTACCCTGGGCTCTCAGCGCCCACC 3092891 28110 NM_000321.2(RB1):c.1333C>T (p.Arg445Ter) RB1 Jul 07, 2017 MedGen:C0027672,SNOMED CT:699346009;Human Phenotype Ontology:HP:0009919,MeSH:D012175,MedGen:C0035335,OMIM:180200,Orphanet:ORPHA790 Hereditary cancer-predisposing syndrome;Retinoblastoma germline 13 48379594 GCTCTTATTTTTCTTTTTGTTTGTTTGTAGCGATACAAACTTGGAGTTCGCTTGTATTACC 1057520634 368219 NM_014382.3(ATP2C1):c.2197C>T (p.Gln733Ter) ATP2C1 Apr 28, 2015 MedGen:CN517202 not provided germline 3 130996750 ATGAACTTTCCTAATCCTCTCAATGCCATGCAGATTTTGTGGATCAATATTATTATGGATG 863225158 214223 NM_023073.3(CPLANE1):c.2275C>T (p.Gln759Ter) CPLANE1 Feb 23, 2015 MedGen:C3553264,OMIM:614615 Joubert syndrome 17 unknown 5 37226320 AAGATTCATCCTCAAGTAGTAAATCCTGTGCAACAGCCAGGACACAGGTATAATCACTTAT 267607188 25904 NM_001111125.2(IQSEC2):c.1075C>T (p.Arg359Cys) IQSEC2 Jun 01, 2010 Gene:170530,MedGen:C2931498,OMIM:300551,OMIM:309530 Mental retardation, X-linked 1 germline X 53254856 AGGGCTGCCAGGACCATCCAGACAGCCTTCCGCCAGTACCGCATGAACAAGAACTTTGAGC 397515812 51535 NM_000138.4(FBN1):c.4567C>T (p.Arg1523Ter) FBN1 Jan 05, 2018 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:CN118826,Orphanet:ORPHA91387;MedGen:CN517202 Marfan syndrome;Marfan syndrome;Thoracic aortic aneurysm and aortic dissection;not provided germline 15 48468427 TGCCCACCTGATTTTGAACTGAACCCAACTCGAGTTGGCTGTGTTGGTAAGACCTTAAAAA 312262774 49758 NM_025137.3(SPG11):c.5977C>T (p.Gln1993Ter) SPG11 Jan 31, 2013 MedGen:C1858479,OMIM:604360,Orphanet:ORPHA2822 Spastic paraplegia 11, autosomal recessive not provided 15 44574931 AAATGCCTCCATGGGAAGAACTACTGTCGACAGGTCCTCTGTCTGTATGATCTTGCCAAGG 387907087 40005 NM_017547.3(FOXRED1):c.1054C>T (p.Arg352Trp) FOXRED1 Dec 15, 2010 MedGen:C1838979,OMIM:252010 Mitochondrial complex I deficiency germline 11 126276476 GTTGCAGACACCAGTGGAGCCTATTTTCGCCGGGAAGGATTAGGTAGCAACTACCTAGGTG 121908431 20609 NM_014112.4(TRPS1):c.1870C>T (p.Arg624Ter) TRPS1 Jan 24, 2017 MedGen:C0432233,OMIM:190350,SNOMED CT:254091006;MedGen:CN517202 Trichorhinophalangeal dysplasia type I;not provided germline 8 115604099 CACTTGTCTCCTGGGGCGGCTGGAAGCTCGCGAGTCAAACATCAGTGCCATCAGTGTTCAT 145961131 259680 NM_000350.2(ABCA4):c.1906C>T (p.Gln636Ter) ABCA4 Jun 27, 2016 MeSH:C535804,MedGen:C1855465,OMIM:248200;MedGen:CN517202 Stargardt disease 1;not provided germline;unknown 1 94062608 GCGGAGGCTCCAGTTGGAATCTACCTCCAGCAGATGCCCTACCCCTGCTTCGTGGACGATT 387906968 39611 NM_006147.3(IRF6):c.1271C>T (p.Ser424Leu) IRF6 Sep 01, 2010 MedGen:C0265259,OMIM:119500,SNOMED CT:66783006 Popliteal pterygium syndrome germline 1 209788553 TTGATAGTGGCAGTGTCCGCCTGCAGATCTCAACCCCAGACATCAAGGATAACATCGTTGC 63750780 96171 NM_000251.2(MSH2):c.1552C>T (p.Gln518Ter) MSH2 Sep 05, 2013 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Lynch syndrome germline 2 47466699 GGCAAACAGATTAAACTGGATTCCAGTGCACAGTTTGGATATTACTTTCGTGTAACCTGTA -1 441849 NM_000296.3(PKD1):c.7126C>T (p.Gln2376Ter) PKD1 Jan 30, 2017 MedGen:CN517202 not provided germline 16 2106888 GTGTCCTTGGAGTGTGTGTCCTGCAAGGCACAGGCCGTGTACGAAGTGAGCCGCAGCTCCT 121918177 15937 NM_000181.3(GUSB):c.442C>T (p.Pro148Ser) GUSB Apr 01, 1995 MedGen:C0085132,OMIM:253220,Orphanet:ORPHA584 Mucopolysaccharidosis type VII germline 7 65979866 GACACGCTAGAGCATGAGGGGGGCTACCTCCCCTTCGAGGCCGACATCAGCAACCTGGTCC 387907211 40614 NM_005691.3(ABCC9):c.1433C>T (p.Ala478Val) ABCC9 Jun 08, 2012 MedGen:C0795905,OMIM:239850,Orphanet:ORPHA1517 Hypertrichotic osteochondrodysplasia germline 12 21908099 CAATTCAGTACTTTATTGCTACAAAGTTGGCAGAGGCTCAGAAAAGTACACTTGTAAGTAA 200793464 49757 NM_025137.3(SPG11):c.5974C>T (p.Arg1992Ter) SPG11 Jun 09, 2016 Gene:255,MedGen:C1865864,OMIM:602099;MedGen:C1858479,OMIM:604360,Orphanet:ORPHA2822;MedGen:CN517202 Amyotrophic lateral sclerosis type 5;Spastic paraplegia 11, autosomal recessive;not provided germline 15 44574934 AGCAAATGCCTCCATGGGAAGAACTACTGTCGACAGGTCCTCTGTCTGTATGATCTTGCCA 886039253 259342 NM_001242896.1(DEPDC5):c.730C>T (p.Gln244Ter) DEPDC5 Apr 13, 2016 Gene:50987,MedGen:C1858477,OMIM:604364 Epilepsy, familial focal, with variable foci 1 germline 22 31792780 TTTCCTGAAATAAACCGAGCCTCAATTCGACAGGATCACAAGGGGAGATTCTATGAAGACT 267608094 51642 NM_000179.2(MSH6):c.3991C>T (p.Arg1331Ter) MSH6 Jul 17, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0009405,Orphanet:ORPHA443090;MedGen:C1833477,OMIM:614350;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Hereditary nonpolyposis colon cancer;Hereditary nonpolyposis colorectal cancer type 5;Lynch syndrome;not provided germline;unknown 2 47806641 AGAGAATTTGAGAAGATGAATCAGTCACTACGATTATTTCGGTAACTAACTAACTATAATG 199476359 79050 NM_000487.5(ARSA):c.917C>T (p.Thr306Met) ARSA Sep 08, 2017 MedGen:C0023522,OMIM:250100,Orphanet:ORPHA512,SNOMED CT:396338004;MedGen:CN517202 Metachromatic leukodystrophy;not provided paternal 22 50626216 GCTCCGGTCTCTTGCGGTGTGGAAAGGGAACGACCTACGAGGGCGGTGTCCGAGAGCCTGC 886040894 262134 NM_015247.2(CYLD):c.2569C>T (p.Gln857Ter) CYLD Sep 23, 2016 MedGen:C1851526,OMIM:132700 Cylindromatosis, familial germline 16 50794311 TGGGACTGGAGACACGGCTGCATCCCTTGCCAGAATATGGAGTTATTTGCTGTTCTCTGCA 1064795228 427282 NM_000038.5(APC):c.3454C>T (p.Gln1152Ter) APC Nov 28, 2012 MedGen:CN240755 Familial adenomatous polyposis germline 5 112839048 AATTATAGTGAACGTTACTCTGAAGAAGAACAGCATGAAGAAGAAGAGAGACCAACAAATT 373278668 96884 NM_018249.5(CDK5RAP2):c.4672C>T (p.Arg1558Ter) CDK5RAP2 Sep 19, 2013 MedGen:C1858108,OMIM:604804 Primary autosomal recessive microcephaly 3 germline 9 120408401 TCACAGAATGACAAGCTATTGCAGTCTCTCCGAGTGGAGCTGAAGGCGTATGAGAAGCTGG -1 485844 NM_000044.4(AR):c.2171C>T (p.Pro724Leu) AR Dec 08, 2003 MedGen:C0039585,OMIM:300068,SNOMED CT:12313004 Androgen resistance syndrome germline X 67711687 TACACGTGGTCAAGTGGGCCAAGGCCTTGCCTGGTAAGGAAAAGGGAAGTGGGAGCATGAG 45517348 58463 NM_000548.4(TSC2):c.4507C>T (p.Gln1503Ter) TSC2 Jul 25, 2017 MedGen:C1860707,OMIM:613254;MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000 Tuberous sclerosis 2;Tuberous sclerosis syndrome germline 16 2084964 ATCCCCTCCCTGTGCAGTTTCGTGTTCCTGCAGCTCTACCATTCCCCCTTCTTTGGCGACG 111033174 52434 NM_000260.3(MYO7A):c.494C>T (p.Thr165Met) MYO7A Jan 25, 2017 MedGen:C1568247,OMIM:276900,Orphanet:ORPHA231169;MedGen:CN517202 Usher syndrome, type 1;not provided germline 11 77156683 TCTGCAGTGGGGAATCTGGGGCCGGGAAGACGGAGAGCACAAAGCTGATCCTGCAGTTCCT 539286945 377868 NM_007254.3(PNKP):c.1315C>T (p.Arg439Ter) PNKP May 19, 2015 MedGen:CN517202 not provided germline 19 49861679 TCCTTCCCCCACAGGTACGTCCAGTGTGCCCGAGCCGCGGGCGTCCCCTGCCGCTGCTTCC 752615209 263761 NM_022162.2(NOD2):c.1045C>T (p.Leu349Phe) NOD2 Nov 11, 2016 MedGen:C0004943,OMIM:109650,Orphanet:ORPHA117,SNOMED CT:310701003 Behcet's syndrome germline 16 50710956 ATGGCCAAACCACTCTCTGTGCGGACTCTACTCTTTGAGCACTGCTGTTGGCCTGATGTTG 63749980 95037 NM_000179.2(MSH6):c.742C>T (p.Arg248Ter) MSH6 Jun 05, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0009405,Orphanet:ORPHA443090;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Hereditary nonpolyposis colon cancer;Lynch syndrome;not provided germline 2 47798725 TCTAGGCGAAGTAGCCGCCAAATAAAAAAACGAAGGGTCATATCAGATTCTGAGAGTGACA 111033693 45910 NM_000155.3(GALT):c.442C>T (p.Arg148Trp) GALT Oct 27, 2016 MedGen:C0268151,OMIM:230400,Orphanet:ORPHA79239,SNOMED CT:124354006;MedGen:CN517202 Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase;not provided germline 9 34647896 ACGCTGCCACTCATGTCGGTCCCTGAGATCCGGGCTGTTGTTGATGCATGGGCCTCAGTCA 540911439 372493 NM_000372.4(TYR):c.976C>T (p.Gln326Ter) TYR May 01, 2015 MedGen:CN517202 not provided germline 11 89191358 GCTGATGTAGAATTTTGCCTGAGTTTGACCCAATATGAATCTGGTTCCATGGATAAAGCTG 267607061 31156 NM_006516.2(SLC2A1):c.277C>T (p.Arg93Trp) SLC2A1 Dec 21, 2016 MedGen:C1842534,OMIM:612126,Orphanet:ORPHA98811;MedGen:CN517202 GLUT1 deficiency syndrome 2;not provided germline 1 42930865 ACTGGCCTGACCTGTGACCCCGTCCCCAGGCGGAATTCAATGCTGATGATGAACCTGCTGG 768126695 445843 NM_003620.3(PPM1D):c.1210C>T (p.Gln404Ter) PPM1D Sep 01, 2017 MedGen:CN517202 not provided germline 17 60656791 AACCTGACTGACAGCCCTTCCTATAATAGTCAAGAAACCTGTGTGATGACTCCTTCCCCAT 137852463 25356 NM_000132.3(F8):c.6518C>T (p.Thr2173Ile) F8 Jan 01, 1992 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154863139 TTATTGCTCGATACATCCGTTTGCACCCAACTCATTATAGCATTCGCAGCACTCTTCGCAT 121909339 23500 NM_001453.2(FOXC1):c.358C>T (p.Gln120Ter) FOXC1 Nov 01, 2008 MedGen:C2678503,OMIM:602482 Axenfeld-Rieger syndrome type 3 germline 6 1610803 GACCGCTTCCCCTTCTACCGGGACAACAAGCAGGGCTGGCAGAACAGCATCCGCCACAACC 1057519324 362062 NM_003995.3(NPR2):c.1435C>T (p.Arg479Ter) NPR2 Mar 01, 2015 MedGen:C1864356,OMIM:602875,Orphanet:ORPHA40 Acromesomelic dysplasia Maroteaux type inherited 9 35801153 ATGTTTGGTGTTTCCAGCTTCCTAATTTTCCGGTGAGTTCTGGGTTTCTTGCTGACCTACT 1057518352 359770 NM_006772.2(SYNGAP1):c.490C>T (p.Arg164Ter) SYNGAP1 Jan 06, 2017 MedGen:C2675473,OMIM:612621;MedGen:CN517202 Mental retardation, autosomal dominant 5;not provided de novo;germline 6 33432787 AGCAGCTTTCGCCAGATCCTGCCTCGCTTCCGAAGTGCTGACCATGACCGGTACAGGGGCT 5030847 15623 NM_000277.2(PAH):c.754C>T (p.Arg252Trp) PAH Aug 07, 2017 MedGen:C0031485,OMIM:261600,Orphanet:ORPHA716,SNOMED CT:154735006;MedGen:C0031485,OMIM:261600,Orphanet:ORPHA716,SNOMED CT:154735006;MedGen:CN517202 Phenylketonuria;Phenylketonuria;not provided germline;unknown 12 102852903 CTCCGACCTGTGGCTGGCCTGCTTTCCTCTCGGGATTTCTTGGGTGGCCTGGCCTTCCGAG 121434367 17121 NM_000159.3(GCDH):c.1262C>T (p.Ala421Val) GCDH May 08, 2017 Human Phenotype Ontology:HP:0003530,MedGen:C4025603;MedGen:C0268595,OMIM:231670,Orphanet:ORPHA25,SNOMED CT:360416003,SNOMED CT:76175005;MedGen:CN517202 Glutaric acidemia;Glutaric aciduria, type 1;not provided germline;unknown 19 12899486 AATCTTGTCCAGGTACACATGACATTCACGCCCTGATCCTTGGGAGAGCTATCACGGGAAT 876661061 232092 NM_000214.2(JAG1):c.2566C>T (p.Gln856Ter) JAG1 Aug 18, 2015 MedGen:CN517202 not provided germline 20 10642494 TGCCCTCCAGGGCACAGTGGTGCCAAGTGCCAGGAAGGTATGTGTGCCAGGCTTCAGCTGC 121909095 22324 NM_001005360.2(DNM2):c.1856C>T (p.Ser619Leu) DNM2 May 07, 2017 MedGen:C1847902,OMIM:606482;MedGen:CN221282;MedGen:C0410203,OMIM:310400,Orphanet:ORPHA596,SNOMED CT:46804001 DNM2-related intermediate Charcot-Marie-Tooth neuropathy;Myopathy, centronuclear;Severe X-linked myotubular myopathy germline 19 10823862 CCCAGGAAGACGTGGACAGCTGGAAGGCCTCGTTCCTCCGAGCTGGCGTCTACCCCGAGAA 886041013 263159 NM_006087.3(TUBB4A):c.941C>T (p.Ala314Val) TUBB4A Jul 05, 2016 MedGen:C2676244,OMIM:612438,Orphanet:ORPHA139441;MedGen:CN517202 Leukodystrophy, hypomyelinating, 6;not provided germline 19 6495558 ACCCGCGCCACGGCCGCTACCTGACCGTGGCCGCCGTGTTCCGGGGCCGCATGTCCATGAA 121913162 29715 NM_173842.2(IL1RN):c.160C>T (p.Gln54Ter) IL1RN Jun 04, 2009 MedGen:C2748507,OMIM:612852,Orphanet:ORPHA210115;MedGen:CN517202 Osteomyelitis, sterile multifocal, with periostitis and pustulosis;not provided germline 2 113129619 AACCAGAAGACCTTCTATCTGAGGAACAACCAACTAGTTGCTGGATACTTGCAAGGACCAA 121434625 24468 NM_004380.2(CREBBP):c.1069C>T (p.Gln357Ter) CREBBP Jul 27, 1995 MedGen:C0035934,OMIM:180849,Orphanet:ORPHA353277,SNOMED CT:45582004 Rubinstein-Taybi syndrome germline 16 3793533 GATCCTGAAAAACGCAAACTGATACAGCAGCAGCTGGTTCTACTGCTTCATGCTCATAAGT 137852391 25213 NM_000132.3(F8):c.410C>T (p.Thr137Ile) F8 Jan 01, 1995 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154993127 CTGCTATAGGAGCTGAATATGATGATCAGACCAGTCAAAGGGAGAAAGAAGATGATAAAGT 374071862 206604 NM_024531.4(SLC52A2):c.383C>T (p.Ser128Leu) SLC52A2 Mar 17, 2015 MedGen:C3553538,OMIM:614707 Brown-Vialetto-Van Laere syndrome 2 germline 8 144359875 CCTTTGTGCTGGCACTGGCATGCTGTGCCTCGAATGTCACTTTCCTGCCCTTCTTGAGCCA 878855246 241976 NM_177438.2(DICER1):c.2026C>T (p.Arg676Ter) DICER1 Jun 26, 2017 MedGen:CN072455,OMIM:601200;MedGen:C0027672,SNOMED CT:699346009 DICER1-related pleuropulmonary blastoma cancer predisposition syndrome;Hereditary cancer-predisposing syndrome germline;somatic 14 95113106 ACTCTTTATCTGCCAATTAACTCACCTCTTCGAGCCTCCATTGTTGTAAGTTTAGAAGAAG 72653706 21598 NM_001171.5(ABCC6):c.3421C>T (p.Arg1141Ter) ABCC6 Apr 26, 2017 Human Phenotype Ontology:HP:0000973,MedGen:C0010495,Orphanet:ORPHA209,SNOMED CT:58588007;MedGen:C3276161,OMIM:614473;Human Phenotype Ontology:HP:0200034,MedGen:C0332563;MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005;MedGen:C1867450,OMIM:177850;MedGen:CN517202 Cutis laxa;Generalized arterial calcification of infancy 2;Papule;Pseudoxanthoma elasticum;Pseudoxanthoma elasticum, forme fruste;not provided germline;unknown 16 16163078 TTCCAGGGCAGCACAGTGGTCCGGGCATTCCGAACCCAGGCCCCCTTTGTGGCTCAGAACA 398122904 48135 NM_000359.2(TGM1):c.2278C>T (p.Arg760Ter) TGM1 Jan 18, 2013 MedGen:C3536797,OMIM:242300 Autosomal recessive congenital ichthyosis 1 germline 14 24249489 GTGACACTGCGCCAGTCGTTTGTGCCTGTGCGACCAGGCCCCCGCCAGCTCATTGCCAGCT 61816761 31358 NM_002016.1(FLG):c.1501C>T (p.Arg501Ter) FLG May 31, 2017 na;MedGen:C0079584,OMIM:146700;MedGen:CN517202 Dermatitis, atopic, 2, susceptibility to;Ichthyosis vulgaris;not provided germline 1 152313385 GGAAGACAAGGATCGCACCACGAGCAGGCACGAGACAGCTCCAGGCATTCAGCGTCCCAAG 879254033 466104 NM_024675.3(PALB2):c.3436C>T (p.Gln1146Ter) PALB2 Jul 31, 2017 MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006 Familial cancer of breast germline 16 23603584 ACAATTGCCATTTGGGACTTACTTCTCGGTCAGTGTACTGCCCTCCTCCCACCTGTCTCTG 775267348 442159 NM_000435.2(NOTCH3):c.619C>T (p.Arg207Cys) NOTCH3 Oct 05, 2017 MedGen:CN517202 not provided germline 19 15192020 CCCGCGGTGCCCTGTGCACCCTCACCATGCCGTAACGGGGGCACCTGCAGGCAGAGTGGCG 878853884 242671 NM_000267.3(NF1):c.3565C>T (p.Gln1189Ter) NF1 Mar 13, 2016 MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003 Neurofibromatosis, type 1 germline 17 31233070 TTTATGGAAGTTCTGACAAAAATCCTTCAACAAGGCACAGAATTTGACACACTTGCAGAAA 121912991 31875 NM_004415.3(DSP):c.991C>T (p.Gln331Ter) DSP Jan 01, 1999 MedGen:C1852127,OMIM:612908 Keratosis palmoplantaris striata II germline 6 7566428 GTTAAAGAAAAAGAGCTCAATAAGCTGAAACAAGAAAGTGACCAACTTGTCCTCAATCAGC -1 481854 NM_024757.4(EHMT1):c.3649C>T (p.Gln1217Ter) EHMT1 Dec 07, 2017 MedGen:CN517202 not provided germline 9 137834457 CTGGTGCCCGTGCGCGTGTTCATGGCCCACCAGGACCTGCGGTTCCCCCGGATCGCCTTCT 768933093 226933 NM_024685.3(BBS10):c.145C>T (p.Arg49Trp) BBS10 Jan 24, 2017 MedGen:C0752166,OMIM:209900,Orphanet:ORPHA110,SNOMED CT:5619004;MedGen:C1859568,OMIM:615987;MeSH:D030342,MedGen:C0950123 Bardet-Biedl syndrome;Bardet-Biedl syndrome 10;Inborn genetic diseases germline;unknown 12 76348214 ACGAAGCCCACTGGCGAGGTGCTTCTCAGCCGGAATGGAGGCCGCCTCCTGGAGGCGCTAC 398124224 101277 NM_001042537.1(SLC9A6):c.1072C>T (p.Gln358Ter) SLC9A6 Aug 06, 2012 MedGen:CN517202 not provided germline X 136012979 GTGACAAAGTTCACCAAATTACGGGAGTTCCAGTTGTTGGAGACAGGCCTGTTCTTCTTGA 397509378 48038 NM_198506.4(LRIT3):c.1318C>T (p.Arg440Ter) LRIT3 Jan 10, 2013 MedGen:C3554399,OMIM:615058 Congenital stationary night blindness, type 1F germline 4 109870067 ATCTCAGCAAGTACCACCATGGCCAACAAGCGATCATTCCAGCTCCACCAAGGTGGGAAAA 149119723 196148 NM_000071.2(CBS):c.785C>T (p.Thr262Met) CBS Aug 25, 2017 MedGen:C3150344,OMIM:236200;MedGen:CN517202 Homocystinuria due to CBS deficiency;not provided germline;unknown 21 43063943 TGGCTTCAGTGGGCACGGGCGGCACCATCACGGGCATTGCCAGGAAGCTGAAGGAGAAGTG 773902879 263625 NM_006578.3(GNB5):c.994C>T (p.Arg332Ter) GNB5 Nov 09, 2016 MedGen:C4310682,OMIM:617173 Intellectual developmental disorder with cardiac arrhythmia germline 15 52124529 TTTGGACATGAAAACCGCGTTAGCACTCTACGAGTTTCCCCCGATGGGACTGCTTTCTGCT 151339003 39312 NM_003506.3(FZD6):c.1531C>T (p.Arg511Cys) FZD6 Jun 10, 2011 MedGen:C0027339,SNOMED CT:17790008;MedGen:C3279974,OMIM:614157,Orphanet:ORPHA280654 Nail disease;Nail disorder, nonsyndromic congenital, 10 germline;somatic 8 103328406 ACAGAATGGGCTGGGTTTTTTAAACGAAATCGCAAGAGAGAGTAAGAAACTATTGAATTGT 137852207 25821 NM_194277.2(FRMD7):c.601C>T (p.Gln201Ter) FRMD7 Nov 01, 2006 MedGen:C1839580,OMIM:310700 Infantile nystagmus, X-linked germline X 132085625 CCTCACCCCGCCAGTGATGGTGAAGGGATGCAGATTCACCTGGCTGTTGCTCACATGGGAG -1 485820 NM_000475.4(NR0B1):c.952C>T (p.Gln318Ter) NR0B1 Jan 06, 2009 MedGen:C0342482,OMIM:300200,SNOMED CT:237764004 Congenital adrenal hypoplasia, X-linked germline X 30308412 ACTGTGGAAGTCTCGGAGCCCAGCATGCTGCAGAAGATCCTCACCACCAGGCGGCGGGAGA 121909801 22796 NM_001017535.1(VDR):c.88C>T (p.Arg30Ter) VDR Feb 01, 1998 MedGen:C0268690,OMIM:277440,SNOMED CT:72831007 Vitamin D-dependent rickets, type 2 germline 12 47879026 GTGCCCCGGATCTGTGGGGTGTGTGGAGACCGAGCCACTGGCTTTCACTTCAATGCTATGA 1135401823 424691 NM_015125.4(CIC):c.1057C>T (p.Arg353Ter) CIC Aug 21, 2017 MedGen:CN368509,OMIM:617600;MedGen:CN517202 MENTAL RETARDATION, AUTOSOMAL DOMINANT 45;not provided germline 19 42289013 ACAGTTGGGGGACCTGGCTCAGCCCGGCCCCGAGCTTTCTCCCACAGCGGGGTACACAGCC 548296552 197745 NM_000138.4(FBN1):c.2926C>T (p.Arg976Cys) FBN1 May 12, 2014 MedGen:CN517202 not provided germline 15 48490007 GAGTGCACCCTGCCTATTGCTGGCCGCCACCGCATGGACGCCTGCTGCTGCTCCGTCGGGG 104894014 31182 NM_000162.3(GCK):c.1367C>T (p.Ala456Val) GCK Apr 01, 2002 MedGen:C1865290,OMIM:602485,Orphanet:ORPHA79299 Hyperinsulinemic hypoglycemia familial 3 germline 7 44145167 GCCGGGGCGCGGCCCTGGTCTCGGCGGTGGCCTGTAAGAAGGCCTGTATGCTGGGCCAGTG 370242930 181525 NM_017831.3(RNF125):c.520C>T (p.Arg174Cys) RNF125 Mar 11, 2015 MedGen:C4015710,OMIM:616260 Tenorio syndrome germline 18 32065917 CTTGTTTGTTTCCAGTTCTGTCCACTTTGCCGTTTAATACCCGATGAGAATCCAAGCAGCT 756651509 361250 NM_181332.2(NLGN4X):c.301C>T (p.Arg101Ter) NLGN4X May 01, 2016 MedGen:C1845539,OMIM:300495 Autism, susceptibility to, X-linked 2 maternal X 6151166 CCAGAACCCCCGTCCTCCTGGACTGGCATCCGAAATACTACTCAGTTTGCTGCTGTGTGCC 1057520291 371841 NM_000545.6(HNF1A):c.511C>T (p.Arg171Ter) HNF1A Jun 28, 2017 MedGen:CN517202 not provided germline 12 120989017 GCCCTGTACACCTGGTACGTCCGCAAGCAGCGAGAGGTGGCGCAGCGTAAGTAATGACCCT 879253883 245205 NM_004977.2(KCNC3):c.1283C>T (p.Thr428Ile) KCNC3 Jul 20, 2016 MedGen:C1854488,OMIM:605259,Orphanet:ORPHA98768 Spinocerebellar ataxia 13 germline 19 50323670 TCGTCCGCATCCTGCGCATCTTCAAGCTGACCCGGCACTTCGTGGGGCTGCGCGTGCTGGG 748749078 247514 NM_003504.4(CDC45):c.333C>T (p.Asn111=) CDC45 Oct 20, 2016 MedGen:C4310738,OMIM:617063 Meier-gorlin syndrome 7 germline 22 19482818 TAGGCCAGTCAATGTCGTCAATGTATACAACGATACCCAGGTACTTTTTGTGCTATGCCCT 397514914 75819 NM_000548.4(TSC2):c.1864C>T (p.Arg622Trp) TSC2 Jul 14, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000 Hereditary cancer-predisposing syndrome;Tuberous sclerosis syndrome germline 16 2071534 TGACAGGCCTTTGACTTCCTGTTGCTGCTGCGGGCCGACTCACTGCACCGCCTGGGCCTGC 397515734 51418 NM_000038.5(APC):c.694C>T (p.Arg232Ter) APC May 08, 2017 MedGen:CN240755;MedGen:C2713442,OMIM:175100;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Familial adenomatous polyposis;Familial adenomatous polyposis 1;Hereditary cancer-predisposing syndrome;not provided germline;unknown 5 112792494 CAGCAAATCGAAAAGGACATACTTCGTATACGACAGCTTTTACAGTCCCAAGCAACAGAAG -1 458489 NM_017780.3(CHD7):c.3490C>T (p.Gln1164Ter) CHD7 Mar 22, 2017 MedGen:C0265354,OMIM:214800,Orphanet:ORPHA138,SNOMED CT:47535005 CHARGE association germline 8 60828774 AGTCGCTTCCCTTCAGAAACCACATTTATGCAAGAATTTGGTGATCTAAAAACAGAAGAGC 104893612 24512 NM_001298.2(CNGA3):c.488C>T (p.Pro163Leu) CNGA3 Jul 01, 1998 MedGen:C1857618,OMIM:216900 Achromatopsia 2 germline 2 98389696 CGAAAAAGAAGGATGCGATCGTGGTGGACCCGTCCAGCAACCTGTACTACCGCTGGCTGAC 121918570 28198 NM_000448.2(RAG1):c.2923C>T (p.Arg975Trp) RAG1 May 08, 2008 MedGen:C2673536,OMIM:233650,Orphanet:ORPHA157949 Combined cellular and humoral immune defects with granulomas germline 11 36576227 GAGTCTGGTAACAAACTGTTTAGGCGCTTCCGGAAAATGAATGCCAGGCAGTCCAAATGCT 118192161 28006 NM_000540.2(RYR1):c.487C>T (p.Arg163Cys) RYR1 Aug 28, 2015 MedGen:C0751951,OMIM:117000,Orphanet:ORPHA597,SNOMED CT:43152001;MedGen:CN031421,OMIM:145600;MedGen:CN517202 Central core disease;Malignant hyperthermia, susceptibility to, 1;not provided germline;unknown 19 38444211 TCCAAGCAGAGGTCTGAAGGAGAAAAGGTCCGCGTTGGGGATGACATCATCCTTGTCAGTG 387906726 38943 NM_002641.3(PIGA):c.1234C>T (p.Arg412Ter) PIGA May 06, 2014 MedGen:C3275508,OMIM:300868,Orphanet:ORPHA300496 Multiple congenital anomalies-hypotonia-seizures syndrome 2 germline X 15321727 TCAGTGGAAGCTGTGTTGCCAATGGACAAACGACTGGACAGACTTATTTCTCACTGCGGCC 5743289 19736 NM_022162.2(NOD2):c.2798+158C>T NOD2 Jan 31, 2017 MedGen:C1861303,OMIM:186580,Orphanet:ORPHA90340;na;na Blau syndrome;INFLAMMATORY BOWEL DISEASE 1 (CROHN DISEASE), SUSCEPTIBILITY TO;YAO SYNDROME, SUSCEPTIBILITY TO not provided 16 50722863 AAAGACCATTGGATTTCAAGAGAGGACACTCGAGTCTTTCTGGGTGACTTGGAAATGTCCC 121909191 23025 NM_000474.3(TWIST1):c.563C>T (p.Ser188Leu) TWIST1 Apr 01, 2007 MedGen:CN029978,OMIM:123100 Craniosynostosis 1 germline 7 19116759 TGGCTCACGAGCGGCTCAGCTACGCCTTCTCGGTCTGGAGGATGGAGGGGGCCTGGTCCAT 121908469 20839 NM_139025.4(ADAMTS13):c.304C>T (p.Arg102Cys) ADAMTS13 Oct 04, 2001 MedGen:C1268935,OMIM:274150,Orphanet:ORPHA93583,SNOMED CT:373420004 Upshaw-Schulman syndrome germline 9 133424452 GTCTTCCAGGCTCACCAGGAGGACACAGAGCGCTATGTGCTCACCAACCTCAACATCGTGA 879255683 247646 NM_144997.6(FLCN):c.1579C>T (p.Arg527Ter) FLCN Apr 27, 2017 MedGen:C0346010,OMIM:135150,Orphanet:ORPHA122,SNOMED CT:110985001;MedGen:CN517202 Multiple fibrofolliculomas;not provided germline 17 17213816 GTGCTTTTTAAGTTCACCAAGGTGGACAGTCGACCCAAAGAGGACACACAGAAGCTGCTGA 132630269 26155 NM_000377.2(WAS):c.167C>T (p.Ala56Val) WAS Apr 01, 1995 MedGen:C1839163,OMIM:313900,Orphanet:ORPHA852 Thrombocytopenia, X-linked germline X 48684317 TGGCCACTGCAGTTGTTCAGCTGTACCTGGCGCTGCCCCCTGGAGCTGAGCACTGGACCAA 863224146 212014 NM_000284.3(PDHA1):c.910C>T (p.Arg304Ter) PDHA1 Apr 24, 2014 MedGen:CN517202 not provided germline X 19358926 CTACTTTTCCCTCCCCATAGTTACCGTACACGAGAAGAAATTCAGGAAGTAAGAAGTAAGA 398123795 100242 NM_003494.3(DYSF):c.5644C>T (p.Gln1882Ter) DYSF Oct 30, 2013 MedGen:C1850889,OMIM:253601,Orphanet:ORPHA268;MedGen:C1850808,OMIM:254130,Orphanet:ORPHA45448 Limb-girdle muscular dystrophy, type 2B;Miyoshi muscular dystrophy 1 germline 2 71669723 ATTTTCCCCTTCGACTACCTGCCAGCTGAGCAAGTCTGTACCATTGCCAAGAAGGTCAGTG 796052231 204050 NM_001356.4(DDX3X):c.1126C>T (p.Arg376Cys) DDX3X Aug 06, 2015 MedGen:C4085582,OMIM:300958,Orphanet:ORPHA457260 Mental retardation, X-linked 102 germline X 41345280 GAACAAGATACTATGCCTCCAAAGGGTGTCCGCCACACTATGATGTTTAGTGCTACTTTTC 876660447 261414 NM_000059.3(BRCA2):c.7495C>T (p.Gln2499Ter) BRCA2 Oct 18, 2016 MedGen:C2675520,OMIM:612555 Breast-ovarian cancer, familial 2 germline 13 32356487 GATATACAGGATATGCGAATTAAGAAGAAACAAAGGCAACGCGTCTTTCCACAGCCAGGCA 121434386 17498 NM_174934.3(SCN4B):c.535C>T (p.Leu179Phe) SCN4B Jul 10, 2007 MedGen:C2678484,OMIM:611819 Long QT syndrome 10 germline 11 118141265 GTCGTGGGCGGGGTCATCGGGCTCCTCATCCTCATCCTGCTGATCAAGAAACTCATCATCT -1 475422 NM_004329.2(BMPR1A):c.1360C>T (p.Gln454Ter) BMPR1A Jan 29, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 10 86923393 CATTCCCTTATAGGGATCGTGGAAGAATACCAATTGCCATATTACAACATGGTACCGAGTG 772135867 204602 NM_004700.3(KCNQ4):c.2039C>T (p.Ser680Phe) KCNQ4 Aug 20, 2015 MedGen:C2677637,OMIM:600101 DFNA 2 Nonsyndromic Hearing Loss germline 1 40838474 GCCCTGTGGACCACGAGGACATCTCCGTCTCCGCACAGACGCTCAGCATCTCCCGCTCGGT 1057518751 359148 NM_153461.3(IL17RC):c.412C>T (p.Gln138Ter) IL17RC Jul 06, 2015 MedGen:C4225324,OMIM:616445 Candidiasis, familial, 9 germline 3 9917994 CCGGGCCCCGTGCTGGCGCCTACGCACCTGCAGACAGAGCTGGTGCTGAGGTGCCAGAAGG 587784241 169390 NM_000430.3(PAFAH1B1):c.1111C>T (p.Arg371Ter) PAFAH1B1 Feb 08, 2013 MedGen:C1843916,OMIM:607432 Lissencephaly 1 germline 17 2680272 ACCCTACGCGTATGGGATTACAAGAACAAGCGATGCATGAAGACCCTCAATGCGCATGAAC 587776906 40295 NM_001163809.1(WDR81):c.2567C>T (p.Pro856Leu) WDR81 Dec 01, 2011 Gene:780925,MedGen:C2750234,OMIM:610185 Cerebellar ataxia, mental retardation, and dysequilibrium syndrome 2 germline 17 1727526 TTGAGTACAGGCCTGTCTCCCAGGGCCTGCCCCCACCCTGCCCAAGCCAGCTTCTCAGCCC 886039518 260278 NM_000276.3(OCRL):c.1576C>T (p.Pro526Ser) OCRL Mar 17, 2016 MedGen:CN517202 not provided germline X 129569373 CACATGGAACTGAAAACCAGCGACCACAAGCCTGTTAGCGCCCTCTTCCATATTGGGGTAA 377735262 100178 NM_003494.3(DYSF):c.1663C>T (p.Arg555Trp) DYSF Mar 28, 2017 MedGen:CN239317;MedGen:C1850889,OMIM:253601,Orphanet:ORPHA268;MedGen:C1850808,OMIM:254130,Orphanet:ORPHA45448;MedGen:CN517202 DYSF-Related Disorders;Limb-girdle muscular dystrophy, type 2B;Miyoshi muscular dystrophy 1;not provided germline 2 71551631 TGGCAGGGGGAAGGTGTGGCTTATCGTGGCCGGCTTCTGCTCTCCCTGGAGACCAAGCTGG -1 471455 NM_000475.4(NR0B1):c.901C>T (p.Gln301Ter) NR0B1 Jul 31, 2017 MedGen:C1848296,OMIM:300018;MedGen:C0342482,OMIM:300200,SNOMED CT:237764004 46,XY sex reversal, type 2;Congenital adrenal hypoplasia, X-linked germline X 30308463 TGGGCGTCCCTGCTCATGCTTGAGCTGGCCCAGGACCGCTTGCAGTTCGAGACTGTGGAAG 587784242 169391 NM_000430.3(PAFAH1B1):c.1135C>T (p.His379Tyr) PAFAH1B1 Feb 08, 2013 MedGen:C1843916,OMIM:607432 Lissencephaly 1 germline 17 2680296 AACAAGCGATGCATGAAGACCCTCAATGCGCATGAACACTTTGTTACCTCCTTGGGTATGT 121909398 17403 NM_201548.4(CERKL):c.769C>T (p.Arg257Ter) CERKL Jun 14, 2016 Human Phenotype Ontology:HP:0000556,MedGen:C0854723,Orphanet:ORPHA71862,SNOMED CT:314407005;MedGen:CN239466;Human Phenotype Ontology:HP:0000547,MeSH:D012174,MedGen:C0035334,OMIM:268000,Orphanet:ORPHA791,SNOMED CT:28835009;MedGen:C1842127,OMIM:608380;MedGen:C1842127,OMIM:608380 Retinal dystrophy;Retinitis Pigmentosa, Recessive;Retinitis pigmentosa;Retinitis pigmentosa 26;Retinitis pigmentosa 26 germline;unknown 2 181558617 GCTCAGAAGAATGCTGGGATGGAAACAGACCGAATCCTGACTCCTGTCAGAGCACAGCTTC 1064794808 410512 NM_001127221.1(CACNA1A):c.4058C>T (p.Pro1353Leu) CACNA1A Mar 22, 2017 MedGen:CN517202 not provided germline 19 13262768 AATCCCTCCGAGTCCTCCGGGTGCTACGACCTCTTAAAACCATCAAGCGGCTGCCAAAGCT 267608678 40104 NM_007055.3(POLR3A):c.418C>T (p.Arg140Ter) POLR3A Aug 02, 2012 MedGen:C1843200,OMIM:607694 Hypomyelinating leukodystrophy 7 germline 10 78025043 AAGAGGCCCGGCCTGACCTACCTTCAGAAGCGAGGACTGAAAAAGAAAATCTCTGACAAGT 1131691845 421955 NM_001164144.2(CHAMP1):c.403C>T (p.Gln135Ter) CHAMP1 May 19, 2017 MedGen:CN517202 not provided germline 13 114324245 AAATCCATACCTGCCCTTTCAATGGAAACACAGAAACTTGGTTCAGTTTTGTCTCCAGAAT 397508343 68110 NM_000492.3(CFTR):c.2143C>T (p.Gln715Ter) CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline 7 117592310 ATCAACTCTATACGAAAATTTTCCATTGTGCAAAAGACTCCCTTACAAATGAATGGCATCG 104894681 19259 NM_024301.4(FKRP):c.1343C>T (p.Pro448Leu) FKRP Aug 24, 2016 MedGen:C1847759,OMIM:606612;MedGen:CN068805 Congenital muscular dystrophy-dystroglycanopathy (with or without mental retardation) type B5;Congenital muscular dystrophy-dystroglycanopathy without mental retardation, type B5 germline 19 46756793 ATGTGGAGTTTCCCGAGCACTTCCTGCAGCCGCTGGTGCCCCTGCCCTTTGCCGGCTTCGT 121918103 28400 NM_001042465.2(PSAP):c.650C>T (p.Thr217Ile) PSAP Apr 01, 1990 MedGen:C0268262,OMIM:249900,SNOMED CT:68390005 Sphingolipid activator protein 1 deficiency germline 10 71828084 ACATCCAGACTGCTGTACGGACCAACTCCACCTTTGTCCAGGCCTTGGTGGAACATGTCAA 876659480 233486 NM_000535.6(PMS2):c.2155C>T (p.Gln719Ter) PMS2 Sep 29, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline 7 5982843 TTCGAGATGCTGCAGCAGCACACCGTGCTCCAGGGGCAGAGGCTCATAGCGTGAGTGTGTT -1 481276 NM_001288653.1(CLTC):c.4675C>T (p.Gln1559Ter) CLTC Feb 02, 2018 MedGen:CN787270,OMIM:617854 MENTAL RETARDATION, AUTOSOMAL DOMINANT 56 germline 17 59685644 AAAGATACTGAATTGGCTGAAGAACTCCTGCAGTGGTTTTTGCAGGAAGAAAAAAGAGAGT 63750987 426880 NM_001171.5(ABCC6):c.3362C>T (p.Ser1121Leu) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16163137 AGCTGAGACGCTTGGAGTCAGCCAGCTACTCGTCTGTCTGCTCCCACATGGCTGAGACGTT 121909210 22907 NM_000358.2(TGFBI):c.370C>T (p.Arg124Cys) TGFBI Apr 01, 1998 MedGen:C1690006,OMIM:122200,SNOMED CT:419197009 Lattice corneal dystrophy Type I germline 5 136046406 GGATCCACCACCACTCAGCTGTACACGGACCGCACGGAGAAGCTGAGGCCTGAGATGGAGG 61755907 439331 NM_001017995.2(SH3PXD2B):c.250C>T (p.Arg84Ter) SH3PXD2B Jun 19, 2017 MedGen:CN517202 not provided germline 5 172394622 TCATCTTCTGCAGGTAAGATTCTCTTCAGACGAAGCCACATCCGGGACGTGGCTGTCAAAC 796053253 201147 NM_006516.2(SLC2A1):c.971C>T (p.Ser324Leu) SLC2A1 Mar 04, 2017 MedGen:C3149117;MedGen:CN517202 GLUT1 deficiency syndrome 1, autosomal recessive;not provided germline 1 42929211 GTATCGTCAACACGGCCTTCACTGTCGTGTCGGTGAGTCTTTGCTTACTGGCCCCCCCAGC 763293192 191277 NM_022132.4(MCCC2):c.1081C>T (p.Arg361Ter) MCCC2 Feb 09, 2015 MedGen:C1859499,OMIM:210210 3-methylcrotonyl CoA carboxylase 2 deficiency germline 5 71643827 CTTCTTTGAACTTTCTTTTGAGGATTTGCTCGAATATTTGGGTACCCAGTAGGTATCGTTG 121908173 19629 NM_030777.3(SLC2A10):c.394C>T (p.Arg132Trp) SLC2A10 Sep 10, 2014 MedGen:C1859726,OMIM:208050,Orphanet:ORPHA3342 Arterial tortuosity syndrome germline 20 46725430 TACGTGTCAGAGCTGGTGGGGCCACGGCAGCGGGGAGTGCTGGTGTCCCTCTATGAGGCAG 387907070 39915 NM_001040613.2(TMEM70):c.238C>T (p.Arg80Ter) TMEM70 Mar 01, 2011 MedGen:C3279699,OMIM:614052,Orphanet:ORPHA1194 Nuclearly-encoded mitochondrial complex V (ATP synthase) deficiency 2 germline 8 73978783 TAGATCCCTGTTTATTGGGAAGGATATGTTCGATTCTTAAATACGCCATCTGACAAATCAG 128627256 26327 NM_004006.2(DMD):c.8713C>T (p.Arg2905Ter) DMD May 18, 2017 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009;MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009;MedGen:C3668940,OMIM:302045;MedGen:C3668940,OMIM:302045;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Becker muscular dystrophy;Becker muscular dystrophy;Dilated cardiomyopathy 3B;Dilated cardiomyopathy 3B;Duchenne muscular dystrophy;Duchenne muscular dystrophy germline;unknown X 31478330 GAGAGAGCCCAGAATGTCACTCGGCTTCTACGAAAGCAGGCTGAGGAGGTCAATACTGAGT 5030820 17257 NM_000551.3(VHL):c.499C>T (p.Arg167Trp) VHL Nov 01, 2017 MedGen:C0027672,SNOMED CT:699346009;Human Phenotype Ontology:HP:0002666,MedGen:C0031511,OMIM:171300;Human Phenotype Ontology:HP:0005584,MeSH:D002292,MedGen:C0007134,OMIM:605074,Orphanet:ORPHA217071,SNOMED CT:41607009;MedGen:C0019562,OMIM:193300,Orphanet:ORPHA892,SNOMED CT:46659004;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Pheochromocytoma;Renal cell carcinoma, papillary, 1;Von Hippel-Lindau syndrome;not provided germline;somatic 3 10149822 ACTCTGAAAGAGCGATGCCTCCAGGTTGTCCGGAGCCTAGTCAAGCCTGAGAATTACAGGA 104893985 17491 NM_000434.3(NEU1):c.239C>T (p.Pro80Leu) NEU1 Jan 01, 2002 MedGen:C0268226,OMIM:256550 Sialidosis, type II germline 6 31862112 AGATCGGCTCAGTGGACACCTTCCGCATCCCGCTCATCACAGCCACTCCGCGGGGCACTCT 181011657 440200 NM_001080463.1(DYNC2H1):c.10594C>T (p.Arg3532Ter) DYNC2H1 Jan 03, 2018 MedGen:C0265275,Orphanet:ORPHA474,SNOMED CT:75049004;MedGen:CN674505;MedGen:C2751311,OMIM:613091,SNOMED CT:254051008 Jeune thoracic dystrophy;Short-rib polydactyly syndrome type III;Short-rib thoracic dysplasia 3 with or without polydactyly germline;maternal;paternal;unknown 11 103257719 ATGTACCGTTTTAGTTTGGCTGCTTTTCTCCGACTTTTCCAACGAGCTCTACAAAACAAAC 886041722 264872 NM_015339.4(ADNP):c.790C>T (p.Arg264Ter) ADNP Apr 27, 2016 MedGen:CN517202 not provided germline 20 50893924 ATGATTGGGCACACAAATGTAGTGGTTCCCCGATCCAAACCCTTGATGCTAATTGCTCCCA 121434225 18452 NM_006147.3(IRF6):c.1177C>T (p.Gln393Ter) IRF6 Oct 01, 2002 MedGen:C0265259,OMIM:119500,SNOMED CT:66783006 Popliteal pterygium syndrome germline 1 209789669 AAACCATTGGAAAGGAAACTCATCTTGGTTCAGGTGAGAAGATAAGGCTGTGTCAACAACT 387907144 40173 NM_020732.3(ARID1B):c.3223C>T (p.Arg1075Ter) ARID1B Mar 16, 2017 MedGen:CN029606,OMIM:135900;MedGen:CN517202 Coffin-Siris syndrome 1;not provided germline 6 157181056 AATGAGCCAGAGAGAAAGCTCTGGGTCGACCGATACCTCACCTTCATGGAAGAGAGAGGCT 397507819 66651 NM_000059.3(BRCA2):c.5992C>T (p.Gln1998Ter) BRCA2 Oct 18, 2016 MedGen:C2675520,OMIM:612555 Breast-ovarian cancer, familial 2 germline 13 32340347 GTATCAGATGCTTCATTACAAAACGCAAGACAAGTGTTTTCTGAAATAGAAGATAGTACCA 587780062 133253 NM_000535.6(PMS2):c.823C>T (p.Gln275Ter) PMS2 Aug 01, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0009405,Orphanet:ORPHA443090;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Hereditary nonpolyposis colon cancer;not provided germline 7 5995614 ATGTTGAATAGCATCTCAGGTTTCATTTCACAATGCACGCATGGAGTTGGAAGGAGTTCAA 765799472 216025 NM_172250.2(MMAA):c.64C>T (p.Arg22Ter) MMAA Jun 21, 2017 Human Phenotype Ontology:HP:0002912,MedGen:C0268583,SNOMED CT:42393006;MedGen:C1855109,OMIM:251100,Orphanet:ORPHA79310;MedGen:CN517202 Methylmalonic acidemia;Methylmalonic aciduria cblA type;not provided germline 4 145639203 TTCCTAAAAGGCCTTTTAAGAGCACCTTTCCGATGTTACCACTTCATCTTTCACTCAAGTA 1085307128 413915 NM_031296.2(RAB33B):c.211C>T (p.Arg71Ter) RAB33B May 10, 2017 MedGen:C3714896,OMIM:615222 Smith-McCort dysplasia 2 germline 4 139454406 CGCACCGAGGCCACGATAGGGGTGGATTTCCGAGAACGAGCGGTGGAGATTGATGGGGAGC 61750654 105349 NM_000350.2(ABCA4):c.6445C>T (p.Arg2149Ter) ABCA4 May 26, 2015 Human Phenotype Ontology:HP:0000618,MedGen:C0456909;Human Phenotype Ontology:HP:0000608,MedGen:C0024437;Human Phenotype Ontology:HP:0000556,MedGen:C0854723,Orphanet:ORPHA71862,SNOMED CT:314407005;MeSH:C535804,MedGen:C1855465,OMIM:248200;Human Phenotype Ontology:HP:0000572,MedGen:C3665386;MedGen:CN517202 Blindness;Macular degeneration;Retinal dystrophy;Stargardt disease 1;Visual loss;not provided germline;unknown 1 94000870 CGGCTGGCCATCATGGTAAAGGGCGCCTTTCGATGTATGGGCACCATTCAGCATCTCAAGT 587784260 169333 NM_000430.3(PAFAH1B1):c.33-3C>T PAFAH1B1 Feb 08, 2013 MedGen:C1843916,OMIM:607432 Lissencephaly 1 germline 17 2665369 TTTTTTTAGGAGTCATTTGAATTTTTCTTTCAGAAATCGAGCTATAGCAGATTATCTTCGT 121907953 18936 NM_000520.5(HEXA):c.532C>T (p.Arg178Cys) HEXA Aug 23, 2012 na;MedGen:C0039373,OMIM:272800,Orphanet:ORPHA845,SNOMED CT:111385000;MedGen:C1848916 HEXA, Czechoslovakian allele;Tay-Sachs disease;Tay-Sachs disease, B1 variant germline 15 72353106 CCTCACCGGGGCTTGCTGTTGGATACATCTCGCCATTACCTGCCACTCTCTAGCATCCTGG 104894285 28187 NM_000448.2(RAG1):c.1681C>T (p.Arg561Cys) RAG1 Dec 07, 2016 MedGen:C1801959,OMIM:603554,Orphanet:ORPHA39041,SNOMED CT:307650006;MedGen:C1867362;MedGen:C1832322,OMIM:601457,Orphanet:ORPHA331206 Histiocytic medullary reticulosis;Severe combined immunodeficiency, B cell-negative;Severe immunodeficiency, autosomal recessive, T-cell negative, B-cell negative, NK cell-positive germline 11 36574985 TACCCAGTGGACACCATTGCAAAGAGGTTCCGCTATGATTCAGCTTTGGTGTCTGCTTTGA 1060501739 402232 NM_032043.2(BRIP1):c.1495C>T (p.Gln499Ter) BRIP1 Oct 17, 2016 MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C1836860,OMIM:609054 Familial cancer of breast;Fanconi anemia, complementation group J germline 17 61784403 TTCTTATAGGGACATTTTTCTGCTGTTCTTCAAAAAGAGGAAAAAATCTCACCAATTTATG 387906273 17167 NM_005787.5(ALG3):c.165C>T (p.Gly55=) ALG3 Aug 01, 2005 MedGen:C1832736,OMIM:601110,Orphanet:ORPHA79321 Congenital disorder of glycosylation type 1D germline 3 184248776 GGCCGCCTGCCTCTGCCTGGCGGAGGTGGGCATCACCTTCTGGGTCATTCACAGGGTGGCA 5030826 180112 NM_000551.3(VHL):c.194C>T (p.Ser65Leu) VHL Apr 24, 2015 MedGen:C0019562,OMIM:193300,Orphanet:ORPHA892,SNOMED CT:46659004 Von Hippel-Lindau syndrome germline 3 10142041 AGGCCGGGCGGCCGCGGCCCGTGCTGCGCTCGGTGAACTCGCGCGAGCCCTCCCAGGTCAT 886039559 260333 NM_005183.3(CACNA1F):c.1873C>T (p.Arg625Ter) CACNA1F Apr 13, 2016 MedGen:CN517202 not provided germline X 49224798 GCCATGCAGCCCTTGGGCATCTCAGTGCTCCGATGTGTGCGCCTCCTCAGGATCTTTAAGG 78001248 136549 NM_001615.3(ACTG2):c.532C>T (p.Arg178Cys) ACTG2 Apr 26, 2016 MedGen:C1835084,OMIM:155310,Orphanet:ORPHA2241;MedGen:CN517202 Visceral myopathy;not provided de novo;germline 2 73913565 GAAGGCTATGCCCTGCCCCATGCCATCATGCGCCTGGACTTGGCTGGCCGTGACCTCACGG 869312934 226867 NM_002857.3(PEX19):c.775C>T (p.Gln259Ter) PEX19 Sep 20, 2013 MeSH:D030342,MedGen:C0950123 Inborn genetic diseases germline 1 160279842 TCATGTTCCATTTTCCTTATTTTCTAGCTACAAGATTTAGGCCATCCTCCAAAAGAGCTGG 886043963 272877 NM_033071.3(SYNE1):c.11908C>T (p.Arg3970Ter) SYNE1 Jun 09, 2016 MedGen:C2751807,OMIM:612998 Emery-Dreifuss muscular dystrophy 4, autosomal dominant germline 6 152344185 TTGGAACACGAACTTCAGAAGCACGTCAGCCGACAAGACACCCTGCAGCAGTGCCAGGCCT 398124434 102138 NM_052845.3(MMAB):c.568C>T (p.Arg190Cys) MMAB Jan 07, 2016 MedGen:C1855102,OMIM:251110,Orphanet:ORPHA79311 Methylmalonic aciduria cblB type germline 12 109561056 TCGGCGCTGCATTTCTGCCGGGCCGTGTGCCGCCGGGCCGAGAGACGGTAAGAGGGCTGGA 1064796996 407645 NM_024757.4(EHMT1):c.3127C>T (p.Gln1043Ter) EHMT1 Mar 24, 2017 MedGen:CN517202 not provided germline 9 137813477 CCATGCCCCAGCAACTACAAGTACGTCTCTCAGAACTGCGTGACGTCCCCCATGAACATCG 104894077 19232 NM_018972.2(GDAP1):c.487C>T (p.Gln163Ter) GDAP1 Jul 25, 2017 MedGen:C1843183,OMIM:607706;MedGen:C1859198,OMIM:214400,Orphanet:ORPHA99948;MedGen:C4016973;MedGen:CN517202 Charcot-Marie-Tooth disease, axonal, with vocal cord paresis, autosomal recessive;Charcot-Marie-Tooth disease, type 4A;Neuropathy, axonal, with vocal cord paresis, autosomal recessive;not provided germline 8 74361886 TCTGTTTCCAAAATGTTTTTATTATCAGGCCAAATTGGAAACACAGAGTCTGAGCTGAAGA 121908368 20196 NM_020632.2(ATP6V0A4):c.1571C>T (p.Pro524Leu) ATP6V0A4 Sep 01, 2000 MedGen:C1864498,OMIM:602722,Orphanet:ORPHA402041 Renal tubular acidosis, distal, autosomal recessive germline 7 138739541 TTGGAAATCCATACCCGTTTGGGATTGATCCGGTAATAATGTCTTCTTGGGTTAAATATTT 964532159 431273 NM_012160.4(FBXL4):c.616C>T (p.Arg206Ter) FBXL4 Aug 10, 2017 MedGen:C3809592,OMIM:615471,Orphanet:ORPHA369897 Mitochondrial DNA depletion syndrome 13 (encephalomyopathic type) germline 6 98917616 AAGCAGATAAATTTCCCCACAAATCTTATACGACTGGAAGTAAATAGTTCTCTTCTGGAAT 373463881 443699 NM_006846.3(SPINK5):c.1048C>T (p.Arg350Ter) SPINK5 Sep 11, 2017 MedGen:CN517202 not provided germline 5 148099271 GAAAATGAAGAAAAGAAAAAGGCTGAAGCACGAGCTAGAAACAAAAGAGAATCTGGAAAAG 587784147 168220 NM_022455.4(NSD1):c.5425C>T (p.Gln1809Ter) NSD1 Feb 08, 2013 MedGen:CN035106,OMIM:117550 Sotos syndrome 1 germline 5 177269723 TTTGGATCTAATGACTATTTGTGGACTCACCAGGCCCGAGTCTTCCCTTACATGGAGGGTG 72667036 414024 NM_000088.3(COL1A1):c.658C>T (p.Arg220Ter) COL1A1 Feb 03, 2017 MedGen:C0023931,OMIM:166200,SNOMED CT:385482004 Osteogenesis imperfecta type I germline;maternal 17 50197770 TTCTATCTTTTCTAGGGTCCCATGGGTCCCCGAGGTCCCCCAGGTCCCCCTGGAAAGAATG 587776940 48502 NM_020964.2(EPG5):c.3481C>T (p.Arg1161Ter) EPG5 Feb 14, 2013 MedGen:C1855772,OMIM:242840,Orphanet:ORPHA1493 Absent corpus callosum cataract immunodeficiency germline 18 45916110 CAGGCTCTCATAAGCCAGCATCTCTGGTACCGAGAACAACCTATCCTCTTCCTCATGGACC 886037935 248784 NM_004434.2(EML1):c.412C>T (p.Arg138Ter) EML1 Sep 19, 2016 MedGen:C1838239,OMIM:600348 Band heterotopia germline 14 99878513 AGTAACATCAAGAGGACCAGCTCTTCTGAACGAGTGTCTCCTGGGGGTCGAAGGGAAAGCA 113432057 264327 NM_203447.3(DOCK8):c.949C>T (p.Arg317Ter) DOCK8 Aug 30, 2016 MedGen:CN517202 not provided germline 9 328076 CTGAACTCTGACCAGTTCAAAGGATTTCTGCGAGCTCACACGCCTTCAGTGGCCGCATCAA 121908575 21207 NM_004328.4(BCS1L):c.133C>T (p.Arg45Cys) BCS1L Jun 01, 2009 MedGen:C1852372,OMIM:124000 Mitochondrial complex III deficiency germline 2 218661120 GGTGTCCAACTGGGCCTGGTGGCATTCCGGCGCCATTACATGATCACACTGGAAGTCCCTG 267606793 15078 NM_001201543.1(FAM161A):c.1786C>T (p.Arg596Ter) FAM161A Sep 10, 2010 MedGen:C1853734,OMIM:606068 Retinitis pigmentosa 28 germline 2 61836075 AGCGAAAAGGAAAGGATGAGAGAATACCAACGAGAACTAGAAGAAAGAGAAGAAAAATTAA 774363396 481459 NM_148897.2(SDR9C7):c.658C>T (p.Arg220Ter) SDR9C7 Dec 11, 2017 MedGen:CN321864,OMIM:617574 ICHTHYOSIS, CONGENITAL, AUTOSOMAL RECESSIVE 13 germline 12 56929456 CTCGGCAAGGAGAACCTGGAGTCACGCATGCGAAAGCTTTGGGAGAGGCTGCCTCAGGAGA 587783429 168594 NM_017780.3(CHD7):c.1480C>T (p.Arg494Ter) CHD7 Feb 14, 2017 MedGen:C0265354,OMIM:214800,Orphanet:ORPHA138,SNOMED CT:47535005;MedGen:CN517202;MedGen:CN169374 CHARGE association;not provided;not specified germline 8 60742912 GGCCTTGGAGACCCACAAGCAATCCAGGAACGACTGATACCTGGCCAACAACATCCTGGTC 202199411 264659 NM_014363.5(SACS):c.9508C>T (p.Arg3170Ter) SACS Aug 03, 2017 MedGen:C1849140,OMIM:270550,Orphanet:ORPHA98;MedGen:CN517202 Spastic ataxia Charlevoix-Saguenay type;not provided germline;unknown 13 23334368 GACAGTGTTTTGCAAACTTTTGATGCAAAACGACCCAAGTTTCTAACAACATATCATGAAT 587777136 106535 NM_025233.6(COASY):c.175C>T (p.Gln59Ter) COASY Feb 17, 2014 MedGen:C3810230,OMIM:615643,Orphanet:ORPHA397725 Neurodegeneration with brain iron accumulation 6 germline 17 42562797 GGCCCGGCTCAGCCCCAGTCCAGCCCCGTGCAGGCCACGTTTGAGGTTCTTGATTTCATCA 199473433 78320 NM_000238.3(KCNH2):c.2680C>T (p.Arg894Cys) KCNH2 Jun 12, 2013 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MedGen:CN517202 Congenital long QT syndrome;not provided germline 7 150948456 CAACGCAAGCGCAAGTTGTCCTTCCGCAGGCGCACGGACAAGGGTGAGGCGGGGGAGGGGA 397514644 48662 NM_001014431.1(AKT1):c.73C>T (p.Arg25Cys) AKT1 Mar 01, 2013 MedGen:C3554519,OMIM:615109 Cowden syndrome 6 germline 14 104780190 GTAGGGGAGTACATCAAGACCTGGCGGCCACGCTACTTCCTCCTCAAGAATGATGGCACCT 118204041 15542 NM_001010892.2(RSPH4A):c.460C>T (p.Gln154Ter) RSPH4A Jan 30, 2017 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244;MedGen:C2675229,OMIM:612649 Ciliary dyskinesia;Ciliary dyskinesia, primary, 11 germline 6 116617083 CAGTCAGAAGGAAACACCTTTCAACAGTCTCAGCAACCCAAACCCCACCTGTGTGGACGAA 864622592 221422 NM_004656.3(BAP1):c.778C>T (p.Gln260Ter) BAP1 Oct 15, 2015 MedGen:C3280492,OMIM:614327,Orphanet:ORPHA289539 Tumor susceptibility linked to germline BAP1 mutations germline 3 52406258 GTGAACCGTCAGACAGTACTAGAGGCTCTGCAGCAGGTAGGTGCCCTTTCTTCCTGGCCTC 797044586 188168 NM_002055.4(GFAP):c.1073C>T (p.Ala358Val) GFAP Jan 08, 2015 MedGen:C0270726,OMIM:203450,Orphanet:ORPHA58,SNOMED CT:81854007 Alexander's disease germline 17 44911290 AGTACCAGGACCTGCTCAATGTCAAGCTGGCCCTGGACATCGAGATCGCCACCTACAGGAA 281874657 47359 NM_000495.4(COL4A5):c.1135C>T (p.Gln379Ter) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108586717 GAAAAAGGAGAGCGAGGATTTCCTGGAATACAGGGTCCACCTGGCCTTCCTGGACCTCCAG 72558429 103185 NM_000531.5(OTC):c.698C>T (p.Ala233Val) OTC - MedGen:CN517202 not provided unknown X 38408776 ATGAGCCGGATGCTAGTGTAACCAAGTTGGCAGAGCAGTATGCCAAAGAGGTATGCTCTTT -1 464801 NM_025137.3(SPG11):c.2737C>T (p.Gln913Ter) SPG11 Apr 17, 2017 MedGen:C1858479,OMIM:604360,Orphanet:ORPHA2822 Spastic paraplegia 11, autosomal recessive germline 15 44620287 TTTCAAACCCAGCATAGTTATGCTTCACTTCAGCAGAACAAATGGCCCCTTCTGACTGTTG 137852223 25606 NM_000133.3(F9):c.169C>T (p.Gln57Ter) F9 Jul 26, 1986 MedGen:C0008533,OMIM:306900,Orphanet:ORPHA98879,SNOMED CT:41788008 Hereditary factor IX deficiency disease germline X 139537090 TATAATTCAGGTAAATTGGAAGAGTTTGTTCAAGGGAACCTTGAGAGAGAATGTATGGAAG 750331613 418553 NM_001510.3(GRID2):c.2128C>T (p.Arg710Trp) GRID2 Feb 21, 2017 MedGen:C4015505,OMIM:616204,Orphanet:ORPHA363432 Spinocerebellar ataxia, autosomal recessive 18 inherited;not applicable 4 93515346 GAGAGGGACAGCATGTATTCCCAAATGTGGCGGATGATCAACCGAAGCAATGGATCGGAGA 80358999 67064 NM_000059.3(BRCA2):c.7738C>T (p.Gln2580Ter) BRCA2 Sep 08, 2016 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome germline 13 32357862 AAGGAAAGTTTATGGACTGGAAAAGGAATACAGTTGGCTGATGGTGGATGGCTCATACCCT 761848111 264823 NM_013275.5(ANKRD11):c.3562C>T (p.Arg1188Ter) ANKRD11 Nov 08, 2017 MedGen:C0220687,OMIM:148050,Orphanet:ORPHA2332;MedGen:CN517202 KBG syndrome;not provided de novo;germline 16 89282980 GACAAGGAGCCCAGAGACAGGAGAAAGGACCGAGGGGCTGCCGACGCGGGGAGAGACAAAA 121912861 32446 NM_000092.4(COL4A4):c.4129C>T (p.Arg1377Ter) COL4A4 Nov 01, 1998 MedGen:C1567744,OMIM:203780,Orphanet:ORPHA88919 Alport syndrome, autosomal recessive germline 2 227022135 GGGCCACCTGCAGATGTGGATGACTGTCCCCGAATCCCAGGCCTTCCTGGGGCGCCAGGCA 121964972 15170 NM_000071.2(CBS):c.1058C>T (p.Thr353Met) CBS Jul 18, 2017 MedGen:C3150344,OMIM:236200;MedGen:CN068393;MedGen:CN118826,Orphanet:ORPHA91387;MedGen:CN517202 Homocystinuria due to CBS deficiency;Homocystinuria, pyridoxine-nonresponsive;Thoracic aortic aneurysm and aortic dissection;not provided germline;unknown 21 43060528 CCCTCTCTGCAGGTGGCAGTGCTGGCAGCACGGTGGCGGTGGCCGTGAAGGCCGCGCAGGA 139956283 175960 NM_153700.2(STRC):c.5188C>T (p.Arg1730Ter) STRC Oct 17, 2013 MedGen:CN043648,Orphanet:ORPHA87884 Nonsyndromic hearing loss and deafness germline 15 43600011 CAAATGGCCTTTCTGAGTCCTGAGCAGCGACGAGCAGTTGCATGGGCCCAACATGAGGGAA 104894470 17087 NM_152443.2(RDH12):c.565C>T (p.Gln189Ter) RDH12 Aug 01, 2004 MedGen:C2675186,OMIM:612712 Leber congenital amaurosis 13 germline 14 67727097 CACATTGGCAAGATTCCCTTCCACGACCTCCAGAGCGAGAAGCGCTACAGCAGGGGTTTTG 397509267 70207 NM_007294.3(BRCA1):c.5335C>T (p.Gln1779Ter) BRCA1 Oct 18, 2016 MedGen:C2676676,OMIM:604370;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 1;Hereditary cancer-predisposing syndrome germline 17 43049192 TGATTTTACATCTAAATGTCCATTTTAGATCAACTGGAATGGATGGTACAGCTGTGTGGTG 137852949 19153 NM_138694.3(PKHD1):c.1486C>T (p.Arg496Ter) PKHD1 Aug 25, 2016 MedGen:C0085548,OMIM:263200,Orphanet:ORPHA731,SNOMED CT:28770003 Autosomal recessive polycystic kidney disease germline;unknown 6 52058349 TACCTACGGGAGAAGCACCAGATCCGAGTCCGAGCCCAGAGGCTTCCAGAAGTACAGGTCT 121913482 31371 NM_000142.4(FGFR3):c.742C>T (p.Arg248Cys) FGFR3 Sep 11, 2017 Human Phenotype Ontology:HP:0030078,MeSH:C538231,MedGen:C0152013;Human Phenotype Ontology:HP:0001591,MedGen:C1865186;Human Phenotype Ontology:HP:0003865,MedGen:C1859460;Human Phenotype Ontology:HP:0030731,MeSH:D002277,MedGen:C0007097;Human Phenotype Ontology:HP:0008873,MedGen:C1849937;Human Phenotype Ontology:HP:0010816,MedGen:C0334082,OMIM:162900,Orphanet:ORPHA35125,SNOMED CT:25201003;Human Phenotype Ontology:HP:0002980,MedGen:C1859461;Human Phenotype Ontology:HP:0001510,MedGen:C3552463;MedGen:C0022603,OMIM:182000;Human Phenotype Ontology:HP:0008909,MedGen:C2674171;Human Phenotype Ontology:HP:0009816,MedGen:C0345371;Human Phenotype Ontology:HP:0006775,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:ORPHA29073,SNOMED CT:109989006,SNOMED CT:55921005;Human Phenotype Ontology:HP:0000774,MedGen:C0426790;Human Phenotype Ontology:HP:0000773,MedGen:C0426817;Human Phenotype Ontology:HP:0004322,MedGen:C0349588;Human Phenotype Ontology:HP:0002652,MedGen:C0410528,SNOMED CT:105986008;MedGen:C1851152;Human Phenotype Ontology:HP:0001518,MedGen:C0021288;Human Phenotype Ontology:HP:0030359,MedGen:C0149782;MeSH:C535575,MedGen:C1168401,OMIM:275355,Orphanet:ORPHA67037;MedGen:C1868678,OMIM:187600,Orphanet:ORPHA1860;Human Phenotype Ontology:HP:0006740,MedGen:C0279680;Human Phenotype Ontology:HP:0009824,MedGen:C1837406;MedGen:CN517202;MedGen:CN169374 Adenocarcinoma of lung;Bell-shaped thorax;Bowed humerus;Carcinoma;Disproportionate short-limb short stature;Epidermal nevus;Femoral bowing;Growth delay;Keratosis, seborrheic;Lethal short-limbed short stature;Lower limb undergrowth;Multiple myeloma;Narrow chest;Short ribs;Short stature;Skeletal dysplasia;Skeletal dysplasia with acanthosis nigricans;Small for gestational age;Squamous cell carcinoma of lung;Squamous cell carcinoma of the head and neck;Thanatophoric dysplasia type 1;Transitional cell carcinoma of the bladder;Upper limb undergrowth;not provided;not specified de novo;germline;somatic;unknown 4 1801837 GGCCCCTGAGCGTCATCTGCCCCCACAGAGCGCTCCCCGCACCGGCCCATCCTGCAGGCGG 869025609 224872 NM_177987.2(TUBB8):c.527C>T (p.Ser176Leu) TUBB8 Mar 02, 2017 MedGen:C4225210,OMIM:616780 Oocyte maturation defect 2 germline 10 47865 CATTCAGCATCCTGCCCTCGCCCAAGGTGTCGGACACCGTGGTGGAGCCCTACAACGCCAC 794726826 187834 NM_001165963.1(SCN1A):c.1259C>T (p.Ala420Val) SCN1A Dec 20, 2014 MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002 Severe myoclonic epilepsy in infancy de novo 2 166046888 GCTCATTCTACCTAATAAATTTGATCCTGGCTGTGGTGGCCATGGCCTACGAGGAACAGAA 80357350 69232 NM_007294.3(BRCA1):c.241C>T (p.Gln81Ter) BRCA1 Sep 08, 2016 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome germline 17 43104928 AGGAGCCTACAAGAAAGTACGAGATTTAGTCAACTTGTTGAAGAGCTATTGAAAATCATTT 886043499 271087 NM_003829.4(MPDZ):c.5302C>T (p.Gln1768Ter) MPDZ Mar 16, 2016 MedGen:C3554691,OMIM:615219 Hydrocephalus, nonsyndromic, autosomal recessive 2 germline 9 13119579 GGAATTGCAGATGCCGATGGAAGACTGATGCAGGGAGACCAGATATTAATGGTGAATGGGG 78218009 19219 NM_033629.4(TREX1):c.490C>T (p.Arg164Ter) TREX1 Dec 21, 2015 MedGen:C0796126,OMIM:225750;MedGen:CN517202 Aicardi Goutieres syndrome 1;not provided germline 3 48467145 GATAGCATCACTGCGCTGAAGGCCCTGGAGCGAGCAAGCAGCCCCTCAGAACACGGCCCAA 730880125 178530 NM_002292.3(LAMB2):c.2890C>T (p.Arg964Ter) LAMB2 Jun 16, 2014 MedGen:C1836876,OMIM:609049,Orphanet:ORPHA2670 Pierson syndrome germline 3 49124920 ACAGCTTCCTCTTAACCGTGGGCAGGGCTGCGATGTGAAGCTTGTGCCCCTGGGCACTTTG 11891778 259726 NM_173076.2(ABCA12):c.859C>T (p.Arg287Ter) ABCA12 Jul 26, 2016 MedGen:C0239849,OMIM:242500;MedGen:CN517202 Autosomal recessive congenital ichthyosis 4B;not provided germline 2 215045850 ACATCACTAAGCAATCTATTTGATGTTCTTCGAAAGGCAAACAGGTAAGAAAATGTAAGAA 879253866 244159 NM_015046.5(SETX):c.6322C>T (p.Gln2108Ter) SETX Aug 18, 2015 MedGen:C1853761,OMIM:606002 Spinocerebellar ataxia autosomal recessive 1 inherited 9 132288238 CGAGCTCTATGCCGAGGTGGACGGGAAATACAGGTATCTTTGCATTTCTTGAATAATAACT 28935477 26446 NM_014009.3(FOXP3):c.1189C>T (p.Arg397Trp) FOXP3 Apr 01, 2001 MedGen:C0342288,OMIM:304790,Orphanet:ORPHA37042,SNOMED CT:237618001 Insulin-dependent diabetes mellitus secretory diarrhea syndrome germline X 49251441 CACAACCTGAGTCTGCACAAGTGCTTTGTGCGGGTGGAGAGCGAGAAGGGGGCTGTGTGGA 80338761 20902 NM_006640.4(SEPT9):c.262C>T (p.Arg88Trp) SEPT9 Oct 13, 2013 MedGen:C1834304,OMIM:162100,Orphanet:ORPHA2901;MedGen:CN517202 Amyotrophy, hereditary neuralgic;not provided germline 17 77402298 TCGGGCCCCAAGGCGGCCGAGCCGGTGTCCCGGCGCACTGAGCTGTCCATTGACATCTCGT 121912970 32034 NM_000165.4(GJA1):c.97C>T (p.Arg33Ter) GJA1 Jul 01, 2006 MedGen:C2749477,OMIM:257850 Oculodentodigital dysplasia, autosomal recessive germline 6 121446944 AAGGTGTGGCTGTCAGTACTTTTCATTTTCCGAATCCTGCTGCTGGGGACAGCGGTTGAGT 118204101 16495 NM_000190.3(HMBS):c.499C>T (p.Arg167Trp) HMBS Jul 14, 2016 MedGen:C0162565,OMIM:176000,Orphanet:ORPHA79276,SNOMED CT:234422006;MedGen:CN517202 Acute intermittent porphyria;not provided germline 11 119091413 GACACTGTGGTCCTTAGCAACTCTCCACAGCGGGGAAACCTCAACACCCGGCTTCGGAAGC 121918355 22593 NM_000428.2(LTBP2):c.895C>T (p.Arg299Ter) LTBP2 Mar 01, 2011 MedGen:C2751316,OMIM:613086;MedGen:C1562061,OMIM:251750,SNOMED CT:416671000 Glaucoma 3, primary congenital, d;Microspherophakia germline 14 74555629 CAGCAGCACGTGGGGTTGTCCCGCACTGTCCGACTTCACCCGACTGCCACGGCCAGTAGCC 80344795 266610 NM_001271208.1(NEB):c.6385C>T (p.Gln2129Ter) NEB Aug 30, 2015 MedGen:C1850569,OMIM:256030 Nemaline myopathy 2 germline 2 151656263 ATGCTCAGTGTCACGGCTGCAAAGGATGCCCAAGCCAACATCACCAACACTAACTACAAGC 200296680 167509 NM_001556.2(IKBKB):c.814C>T (p.Arg272Ter) IKBKB Nov 20, 2014 MedGen:C3810043,OMIM:615592,Orphanet:ORPHA397787 Immunodeficiency 15 germline 8 42316223 TATGCTCCTCTCCACAGTGTCCTGGCTGAGCGACTGGAGAAGTGGCTGCAACTGATGCTGA 745386663 359418 NM_000404.3(GLB1):c.841C>T (p.His281Tyr) GLB1 Nov 02, 2016 MedGen:CN517202 not provided germline 3 33051956 ACTGGCTGGCTAGATCACTGGGGCCAACCTCACTCCACAATCAAGACCGAAGCAGTGGCTT 794729143 198195 NM_001134363.2(RBM20):c.1156C>T (p.Gln386Ter) RBM20 Feb 12, 2013 MedGen:CN517202 not provided germline 10 110781765 ATCGGTGCTGGGCGGAGGGCCAAGGAGGACCAGGCGTTGCTATCTGTGCGGCCCCTGCAGG 138818907 36428 NM_000060.4(BTD):c.1489C>T (p.Pro497Ser) BTD Jun 14, 2017 MedGen:C0220754,OMIM:253260,Orphanet:ORPHA79241,SNOMED CT:8808004;MedGen:CN517202 Biotinidase deficiency;not provided germline 3 15645345 TGGGGCAACTTCAGTACTTCCTATATCTTTCCTTTGTTTCTGACCTCAGGGATGACCCTAG 886041227 264878 NM_000444.5(PHEX):c.2239C>T (p.Arg747Ter) PHEX Mar 06, 2017 MedGen:C0733682,OMIM:307800,Orphanet:ORPHA89936,SNOMED CT:82236004;MedGen:CN517202 Familial X-linked hypophosphatemic vitamin D refractory rickets;not provided de novo;germline X 22247942 TCCACGATGAACAGAGGCATGGACTCCTGCCGACTCTGGTAGCTGGGACGCTGGTTTATGG 886039527 259902 NM_017780.3(CHD7):c.1714C>T (p.Gln572Ter) CHD7 Aug 09, 2016 MedGen:CN517202 not provided germline 8 60781048 TTTCTAGAGAAACCAGTGCCGGATATGACTCAGGTTAGTGGACCGAATGCTCAGCTAGTGA 786205868 190053 NM_145068.3(TRPV3):c.2017C>T (p.Leu673Phe) TRPV3 Mar 01, 2014 MedGen:C2609071,OMIM:614594,Orphanet:ORPHA659 Palmoplantar keratoderma, mutilating, with periorificial keratotic plaques germline 17 3518644 ATCCTCACCTTTGTTCTCCTCCTCAACATGCTCATTGCTCTGATGGGCGAGACTGTGGAGA 63749917 96449 NM_000251.2(MSH2):c.2446C>T (p.Gln816Ter) MSH2 Jun 02, 2016 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Lynch syndrome germline 2 47478507 ACCACTGAAGAGACCTTAACTATGCTTTATCAGGTGAAGAAAGGTATGTACTATTGGAGTA 886041390 264787 NM_004960.3(FUS):c.1574C>T (p.Pro525Leu) FUS Mar 12, 2016 MedGen:CN517202 not provided germline 16 31191431 GTGAGCACAGACAGGATCGCAGGGAGAGGCCGTATTAATTAGCCTGGCTCCCCAGGTTCTG 778251205 389234 NM_001171932.1(CDH23):c.1037C>T (p.Pro346Leu) CDH23 Jun 04, 2016 MedGen:C1832394,OMIM:601386 Deafness, autosomal recessive 12 germline 10 71617296 TCCTGGTTATTGACATCAATGACAATGCCCCGGAGTTCAACAGCTCCGAGTACAGCGTGGC 374268850 482057 NM_018418.4(SPATA7):c.1171C>T (p.Arg391Ter) SPATA7 Feb 05, 2018 MedGen:CN517202 not provided germline 14 88437553 TTTTTGTTTATCATTTGTAGGTTTTTAGAACGACTGTTCGAGCGACATATAAAACAAAATA 797045008 205027 NM_000292.2(PHKA2):c.883C>T (p.Arg295Cys) PHKA2 Mar 05, 2014 MedGen:C0017927,OMIM:306000 Glycogen storage disease type IXa1 unknown X 18940030 TTCTCTTATTAGGGGCGTTATGGATGCTGTCGCTTCCTTCGAGATGGTTATAAAACTCCAA 200646556 265742 NM_000070.2(CAPN3):c.1250C>T (p.Thr417Met) CAPN3 Mar 03, 2016 MedGen:C1869123,OMIM:253600,Orphanet:ORPHA267 Limb-girdle muscular dystrophy, type 2A germline 15 42399548 ATTTCACAAAGTTGGAGATCTGCAACCTCACGGCCGATGCTCTGCAGTCTGACAAGCTTCA 760670617 187228 NM_014822.3(SEC24D):c.3044C>T (p.Ser1015Phe) SEC24D Mar 05, 2015 MedGen:C4225382,OMIM:616294 Cole-Carpenter syndrome 2 germline 4 118723570 TAGAAGACAAAGGACTTTACGGAGGCTCTTCTTATGTGGATTTCCTTTGTTGTGTTCACAA 199503269 405611 NM_173076.2(ABCA12):c.7444C>T (p.Arg2482Ter) ABCA12 Aug 14, 2015 MedGen:CN517202 not provided germline 2 214937608 TATTTTGCACTTTTTCTTTCTAGGTTTGGACGAGGATTTACTGTCAAAGTTCACTTGAAGA 387906710 38906 NM_013444.3(UBQLN2):c.1489C>T (p.Pro497Ser) UBQLN2 Aug 21, 2011 MedGen:C3275459,OMIM:300857 Amyotrophic lateral sclerosis 15, with or without frontotemporal dementia germline X 56565362 ACCGCTATAGGCCCTGTAGGCCCAGTCACCCCCATAGGCCCCATAGGCCCTATAGTCCCTT 137853229 21102 NM_004260.3(RECQL4):c.2269C>T (p.Gln757Ter) RECQL4 Jun 12, 2017 MedGen:C0265308,OMIM:218600,Orphanet:ORPHA1225,SNOMED CT:77608001;MedGen:C0032339,OMIM:268400,Orphanet:ORPHA2909,SNOMED CT:69093006 Baller-Gerold syndrome;Rothmund-Thomson syndrome germline 8 144513412 GGCATGTGCAGCCGGGAACGGCGGCGGGTACAGCGAGCCTTCATGCAGGGCCAGTTGCGGG 80356682 29578 NM_000228.2(LAMB3):c.1903C>T (p.Arg635Ter) LAMB3 Oct 17, 2017 MedGen:C0268374,OMIM:226650,Orphanet:ORPHA89840,SNOMED CT:33662006;MedGen:C0079683,OMIM:226700,Orphanet:ORPHA79404,SNOMED CT:400140006;MedGen:CN517202 Adult junctional epidermolysis bullosa;Junctional epidermolysis bullosa gravis of Herlitz;not provided germline;unknown 1 209625721 CTAGATGCAAAGAGTAAGATTGAGCAGATCCGAGCAGTTCTCAGCAGCCCCGCAGTCACAG 587781191 165746 NM_130838.1(UBE3A):c.961C>T (p.Gln321Ter) UBE3A Feb 14, 2014 MedGen:C0162635,OMIM:105830,Orphanet:ORPHA72,SNOMED CT:76880004 Angelman syndrome germline 15 25371153 GACCAGATTCGGAGAATGATGGAGACATTTCAGCAACTTATTACTTATAAAGTCATAAGCA 796053103 201429 NM_001165963.1(SCN1A):c.5710C>T (p.Gln1904Ter) SCN1A Sep 17, 2014 MedGen:CN517202 not provided germline 2 165991565 ATGGCTTCCAATCCTTCCAAGGTCTCCTATCAGCCAATCACTACTACTTTAAAACGAAAAC 373957300 171267 NM_001519.3(BRF1):c.776C>T (p.Thr259Met) BRF1 Jan 05, 2015 MedGen:C4015495,OMIM:616202,Orphanet:ORPHA444072;MedGen:CN221667 Cerebellofaciodental syndrome;cerebellar-facial-dental syndrome germline 14 105228832 TCATCAGTGTGGTCAAAGTGTGTGAGTCCACGCTGCGGAAGAGGTGAGGGGCTCTCATTCA 28933098 29153 NM_000257.3(MYH7):c.5533C>T (p.Arg1845Trp) MYH7 Apr 14, 2009 MedGen:C1842160,OMIM:608358,SNOMED CT:699267007;Gene:8090,MedGen:CN074265,OMIM:181430,Orphanet:ORPHA437572 Myosin storage myopathy;Scapuloperoneal myopathy, MYH7-related germline 14 23415021 GAGTCGGTGAAGGGCATGAGGAAGAGCGAGCGGCGCATCAAGGAGCTCACCTACCAGGTGC 104894960 26475 NM_003413.3(ZIC3):c.745C>T (p.Gln249Ter) ZIC3 Jan 01, 2004 MedGen:C1844020,OMIM:306955 Heterotaxy, visceral, X-linked germline X 137567436 TTCTTCCGTTATATGCGGCAGCCTATCAAGCAGGAGCTGTCGTGCAAGTGGATCGACGAGG 797044962 204638 NM_032436.3(CHAMP1):c.1192C>T (p.Arg398Ter) CHAMP1 Sep 03, 2015 MedGen:C4225275,OMIM:616579;MedGen:CN232368 Mental retardation, autosomal dominant 40;intellectual disability with severe speech impairment de novo;germline 13 114325034 GAGTCATGGAAGTCTGGCCCACCAGAACTCCGAAAGACAGCTCCCACGTTGTCTCCTGAAC 727503504 176073 NM_000363.4(TNNI3):c.508C>T (p.Arg170Trp) TNNI3 Jul 20, 2017 MedGen:C0007196,Orphanet:ORPHA217632;MedGen:C0340429,Orphanet:ORPHA217635,SNOMED CT:233878008;Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569;MedGen:CN517202 Cardiomyopathy, restrictive;Familial restrictive cardiomyopathy;Hypertrophic cardiomyopathy;not provided de novo;germline 19 55154071 GGGGCCCGGGCTAAGGAGTCCCTGGACCTGCGGGCCCACCTCAAGCAGGTGAAGAAGGAGG 397508684 68569 NM_000492.3(CFTR):c.4144C>T (p.Gln1382Ter) CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline 7 117665466 GTGGTATTTTCTTTCTTTTCTAGAACATACCAAATAATTAGAAGAACTCTAAAACAAGCAT 1064325 100569 NM_004006.2(DMD):c.5530C>T (p.Arg1844Ter) DMD Apr 25, 2016 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009;MedGen:C3668940,OMIM:302045;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Becker muscular dystrophy;Dilated cardiomyopathy 3B;Duchenne muscular dystrophy germline X 32345999 TTACAACAAAGAATCACAGATGAGAGAAAGCGAGAGGAAATAAAGATAAAACAGCAGCTGT 120074185 18165 NM_000218.2(KCNQ1):c.1663C>T (p.Arg555Cys) KCNQ1 Jan 09, 2017 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MeSH:D008133,MedGen:C0023976,SNOMED CT:9651007;MedGen:C0035828,OMIM:192500,Orphanet:ORPHA101016,SNOMED CT:20852007;MedGen:CN517202 Congenital long QT syndrome;Long QT syndrome;Long QT syndrome 1;not provided germline 11 2776032 TACTCGCAGGGCCACCTCAACCTCATGGTGCGCATCAAGGAGCTGCAGAGGAGGTGGGCAC 41556519 31832 NM_000400.3(ERCC2):c.2047C>T (p.Arg683Trp) ERCC2 May 09, 2017 MedGen:C0268138,OMIM:278730,SNOMED CT:68637004;MedGen:CN517202 Xeroderma pigmentosum, group D;not provided germline 19 45352352 TCTGTCCCTGGCCTGCGCTTCTGCCCACAGCGGTTTGCCCGTGGGGACAAGCGGGGGAAGC 371637724 214251 NM_001134831.1(AHI1):c.1516C>T (p.Arg506Ter) AHI1 Feb 23, 2015 MedGen:C1837713,OMIM:608629 Joubert syndrome 3 unknown 6 135448400 TTGCAGCTATATTACCCACCTACTAAGCCTCGATCCCCATTAAGTGTTGTTGAGGCATTTG 374140736 199304 NM_001256850.1(TTN):c.43360C>T (p.Arg14454Ter) TTN Aug 04, 2015 MedGen:CN517202 not provided germline 2 178616508 AGTCCGTTAACTGGATACGTTGTTGAAAAACGAGAAGTCAGCCGGAAAACATGGACTAAAG 796053368 202320 NM_003165.3(STXBP1):c.1439C>T (p.Pro480Leu) STXBP1 Nov 10, 2017 MedGen:C0393706,Orphanet:ORPHA1934;MedGen:C2677326,OMIM:612164;MedGen:CN517202 Early infantile epileptic encephalopathy;Early infantile epileptic encephalopathy 4;not provided germline 9 127678510 AGCAGACCTACCAGCTCTCACGGTGGACTCCGATTATCAAGGACATCATGGAGGTTAGTGC 372445155 361031 NM_000271.4(NPC1):c.1421C>T (p.Pro474Leu) NPC1 Oct 07, 2014 Human Phenotype Ontology:HP:0002524,MedGen:C0007384,SNOMED CT:46263000;Human Phenotype Ontology:HP:0001251,MedGen:C0007758,SNOMED CT:85102008;Human Phenotype Ontology:HP:0100543,MedGen:C0683322;Human Phenotype Ontology:HP:0002315,MedGen:C0018681;Human Phenotype Ontology:HP:0002172,MedGen:C1843921;Human Phenotype Ontology:HP:0011098,MedGen:C0349391 Cataplexy;Cerebellar ataxia;Cognitive impairment;Headache;Postural instability;Speech apraxia unknown 18 23554890 TTCAAGACATCTGCTTGGCCCCTCTTTCACCGTATAACACGAACTGCACCATTTTGAGTGT 111033804 36645 NM_000155.3(GALT):c.989C>T (p.Ala330Val) GALT Dec 04, 2012 MedGen:C0268151,OMIM:230400,Orphanet:ORPHA79239,SNOMED CT:124354006 Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase not provided 9 34649494 CTCATTACTACCCTCCGCTCCTGCGCTCTGCCACTGTCCGGAAATTCATGGTTGGCTACGA 1060499626 380443 NM_006624.5(ZMYND11):c.22C>T (p.Arg8Ter) ZMYND11 Feb 09, 2017 MedGen:C4015167,OMIM:616083 Mental retardation, autosomal dominant 30 de novo 10 180034 AAACAGGTCATGGCACGTTTAACAAAAAGACGACAGGCGGATACAAAAGCTATCCAGCATC 138189536 185797 NM_005957.4(MTHFR):c.136C>T (p.Arg46Trp) MTHFR - MedGen:C1856058,OMIM:236250 Homocysteinemia due to MTHFR deficiency germline 1 11802981 GGCCTGGACCCCGAGCGGCATGAGAGACTCCGGGAGAAGATGAGGCGGCGATTGGAATCTG 111033198 52488 NM_000260.3(MYO7A):c.6070C>T (p.Arg2024Ter) MYO7A May 19, 2016 MedGen:C1568247,OMIM:276900,Orphanet:ORPHA231169 Usher syndrome, type 1 germline 11 77211170 TGTCTCTGACAGGAGTTGCCCAAGTATCTCCGAGGCTACCACAAGTGCACGCGGGAGGAGG 121964979 27028 NM_000170.2(GLDC):c.1166C>T (p.Ala389Val) GLDC Jun 05, 2017 Human Phenotype Ontology:HP:0008288,MedGen:C0751748,OMIM:605899,Orphanet:ORPHA407,SNOMED CT:237939006;MedGen:CN517202 Non-ketotic hyperglycinemia;not provided germline 9 6595109 TAAATGTTCTTATCTTTTAGGCCCTCTTGGCGAATATGGCTGCCATGTTTGCAATCTACCA 137901350 480562 NM_021067.4(GINS1):c.247C>T (p.Arg83Cys) GINS1 Jan 10, 2018 MedGen:CN737162,OMIM:617827 IMMUNODEFICIENCY 55 germline 20 25418112 CCAATACCTTCTTGATGTCCTAGGTATGACCGCTTGCTTCGGATCAGAGCACTCAGATGGG 587777107 102968 NM_001013703.3(EIF2AK4):c.1387C>T (p.Arg463Ter) EIF2AK4 Feb 12, 2014 MedGen:C0340848,OMIM:234810,SNOMED CT:234161007 Familial pulmonary capillary hemangiomatosis germline 15 39967713 ATTTGCAAGGAGGATGTGTTTGAGCAAACCCGAGTTCGTTTTAGTGACAATGCTCTGCCTT 796052675 202182 NM_004519.3(KCNQ3):c.679C>T (p.Arg227Ter) KCNQ3 Mar 03, 2014 MedGen:CN517202 not provided germline 8 132180255 AACCAAGGCAATGTTCTGGCCACCTCCCTGCGAAGCCTGCGCTTCCTGCAGATCCTGCGCA 137854447 31779 NM_001972.3(ELANE):c.182C>T (p.Ala61Val) ELANE Dec 01, 1999 MedGen:C0221023,OMIM:162800,Orphanet:ORPHA2686,SNOMED CT:191347008 Cyclical neutropenia germline 19 852990 GAGGCCACTTCTGCGGCGCCACCCTGATTGCGCCCAACTTCGTCATGTCGGCCGCGCACTG 1131691768 421925 NM_003482.3(KMT2D):c.12466C>T (p.Gln4156Ter) KMT2D Nov 17, 2015 MedGen:CN517202 not provided germline 12 49032239 GGGTCCATGACCCAGAACCTTCTGGGCCCCCAACAGCCCATGCTAGAGCGGCCCATGCAAA 29001665 17327 NM_015046.5(SETX):c.994C>T (p.Arg332Trp) SETX Jan 26, 2016 MedGen:C1853761,OMIM:606002;MedGen:CN517202 Spinocerebellar ataxia autosomal recessive 1;not provided germline 9 132331293 GCAAGCTACAATAGAGAGATCCGACATATACGGAACAGCTCTGTAAGGTTAGTTCAGCTAA 59856285 29640 NM_005557.3(KRT16):c.379C>T (p.Arg127Cys) KRT16 Dec 11, 2017 MedGen:C1706595,OMIM:167200;MedGen:C2751804,OMIM:613000;MedGen:CN517202 Pachyonychia congenita 1;Palmoplantar keratoderma, nonepidermolytic, focal;not provided germline;paternal 17 41612310 GAGAAGGTGACCATGCAGAACCTCAATGACCGCCTGGCCTCCTACCTGGACAAGGTGCGTG 606231223 31431 NM_005141.4(FGB):c.958+13C>T FGB Dec 15, 2002 MedGen:C2584774,OMIM:202400,Orphanet:ORPHA98880 Afibrinogenemia, congenital germline 4 154569320 ATTACTGTGGCCTACCAGGTAACGAACAGGCATGCAAAATAAAATCATTCTATTTGAAATG 121909330 23508 NM_007126.4(VCP):c.463C>T (p.Arg155Cys) VCP Jun 23, 2016 MedGen:C1833662,OMIM:167320,Orphanet:ORPHA52430;MedGen:CN517202 Inclusion body myopathy with early-onset paget disease and frontotemporal dementia;not provided germline 9 35065364 TTTGCTCTCGCAGGAGACATTTTTCTTGTCCGTGGTGGGATGCGTGCTGTGGAGTTCAAAG 104894494 29385 NM_002435.2(MPI):c.305C>T (p.Ser102Leu) MPI Jun 01, 1998 MedGen:C1865145,OMIM:602579,Orphanet:ORPHA79319 Congenital disorder of glycosylation type 1B germline 15 74891539 GCAACCTGCCCTTCCTCTTCAAAGTGCTCTCAGTTGAAACACCCCTGTCCATCCAGGCACA 193922365 45102 NM_000218.2(KCNQ1):c.905C>T (p.Ala302Val) KCNQ1 Apr 03, 2015 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MeSH:D008133,MedGen:C0023976,SNOMED CT:9651007 Congenital long QT syndrome;Long QT syndrome germline 11 2572970 GCCGCGTGGAGTTCGGCAGCTACGCAGATGCGCTGTGGTGGGGGGTGGTAAGTCGGAAACT 137852506 25123 NM_000194.2(HPRT1):c.193C>T (p.Leu65Phe) HPRT1 Dec 30, 2010 MedGen:C0268117,OMIM:300323,Orphanet:ORPHA79233,SNOMED CT:238007004 Partial hypoxanthine-guanine phosphoribosyltransferase deficiency germline X 134475239 AAGGAGATGGGAGGCCATCACATTGTAGCCCTCTGTGTGCTCAAGGGGGGCTATAAATTCT 80358434 65796 NM_000059.3(BRCA2):c.1456C>T (p.Gln486Ter) BRCA2 Aug 17, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline;unknown 13 32332934 TCTCATACAGACTGCATTCTTGCAGTAAAGCAGGCAATATCTGGAACTTCTCCAGTGGCTT 690016556 171827 NM_005211.3(CSF1R):c.2629C>T (p.Gln877Ter) CSF1R Oct 31, 2017 Gene:8156,MedGen:C1857300,OMIM:221820;MedGen:CN517202 Hereditary diffuse leukoencephalopathy with spheroids;not provided germline 5 150055262 AAACTGGTGAAGGATGGATACCAAATGGCCCAGCCTGCATTTGCCCCAAAGAATATGTAAG 113994053 20988 NM_003907.2(EIF2B5):c.545C>T (p.Thr182Met) EIF2B5 Aug 31, 2016 MedGen:C1858991,OMIM:603896,Orphanet:ORPHA99854;MedGen:CN517202 Leukoencephalopathy with vanishing white matter;not provided germline 3 184137936 GGAAGCTAGAAAAAAATGTTTCTGTGATGACGATGATCTTCAAGGAGTCATCCCCCAGCCA 121913027 31816 NM_001983.3(ERCC1):c.472C>T (p.Gln158Ter) ERCC1 Mar 01, 2007 MedGen:C1853100,OMIM:610758 Cerebrooculofacioskeletal syndrome 4 germline 19 45419151 CTGCACCCAGACTACATCCATGGGCGGCTGCAGAGCCTGGGGAAGAACTTCGCCTTGCGGG 56275071 31167 NM_005271.4(GLUD1):c.820C>T (p.Arg274Cys) GLUD1 Jan 01, 2001 MedGen:C1847555,OMIM:606762,Orphanet:ORPHA35878 Hyperinsulinism-hyperammonemia syndrome germline 10 87062757 GGAATCCATGGACGCATCTCTGCTACTGGCCGTGGTGTCTTCCATGGGATTGAAAATTTCA 764466442 182979 NM_004329.2(BMPR1A):c.1081C>T (p.Arg361Ter) BMPR1A Jun 29, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0345893,OMIM:174900,Orphanet:ORPHA329971,SNOMED CT:9273005 Hereditary cancer-predisposing syndrome;Juvenile polyposis syndrome germline 10 86919384 GGCACCCAAGGAAAGCCCGCAATTGCTCATCGAGACCTAAAGAGCAAAAACATCCTCATCA 1057520708 377845 NM_000303.2(PMM2):c.157C>T (p.Gln53Ter) PMM2 May 20, 2015 MedGen:CN517202 not provided germline 16 8801889 GTGGTAGGCGGATCGGACTTTGAGAAAGTGCAGGAGCAACTGGGAAATGATGGTAAATGAT -1 450992 NM_014946.3(SPAST):c.421C>T (p.Gln141Ter) SPAST May 24, 2017 MedGen:C1866855,OMIM:182601,Orphanet:ORPHA100985 Spastic paraplegia 4, autosomal dominant germline 2 32087497 ATACAAATAATTTTTTATTTTAAAGCAGGACAGAAGGAGCAAGCTGTGGAATGGTATAAGA 886037931 248761 NM_013328.3(PYCR2):c.796C>T (p.Arg266Ter) PYCR2 Dec 12, 2017 MedGen:C4225332,OMIM:616420;MedGen:CN517202 Leukodystrophy, hypomyelinating, 10;not provided germline 1 225921209 AATGCAGTTGAGGCCTCCTGTATCCGAACACGGTGAGTCCATCCCGCGGACTTCTGTCCCA 104894186 18464 NM_178161.2(PTF1A):c.886C>T (p.Arg296Ter) PTF1A Dec 01, 2004 MedGen:C1836780,OMIM:609069,Orphanet:ORPHA65288 Diabetes mellitus, permanent neonatal, with cerebellar agenesis germline 10 23193805 GAAAAACAACTCAAGGAACAAAATATTATCCGAACAGCCAAAGTCTGGACCCCAGAGGACC 397508840 68811 NM_007294.3(BRCA1):c.1138C>T (p.Gln380Ter) BRCA1 Sep 08, 2016 MedGen:C2676676,OMIM:604370 Breast-ovarian cancer, familial 1 germline 17 43094393 GTTCCTTGGATAACACTAAATAGCAGCATTCAGAAAGTTAATGAGTGGTTTTCCAGAAGTG 606231417 170953 NM_005214.4(CTLA4):c.151C>T (p.Arg51Ter) CTLA4 Sep 26, 2014 MedGen:C4015214,OMIM:616100,Orphanet:ORPHA436159 Autoimmune lymphoproliferatiVe syndrome, type V germline 2 203870627 GCCCAGCCTGCTGTGGTACTGGCCAGCAGCCGAGGCATCGCCAGCTTTGTGTGTGAGTATG 886041278 263995 NM_024529.4(CDC73):c.355C>T (p.Gln119Ter) CDC73 May 16, 2017 MedGen:CN517202 not provided germline 1 193135438 GACAGAAGCGCTCCCTTAGAAATAGGTCTTCAGCGATCTACTCAAGGTATGTCTTGTTGCA 754282058 207602 NM_018249.5(CDK5RAP2):c.4207C>T (p.Arg1403Ter) CDK5RAP2 Jan 29, 2015 MedGen:C1858108,OMIM:604804 Primary autosomal recessive microcephaly 3 germline 9 120415130 GACTTACTAATGGAACACATACAGGAAATTCGAACTTTGAGAAAGCGTTTAGAAGAATCTA 1114167399 413979 NM_000088.3(COL1A1):c.3607C>T (p.Gln1203Ter) COL1A1 - MedGen:C0023931,OMIM:166200,SNOMED CT:385482004 Osteogenesis imperfecta type I maternal 17 50186847 AGCGCTGGTTTCGACTTCAGCTTCCTGCCCCAGCCACCTCAAGAGAAGGCTCACGATGGTG -1 443693 NM_005859.4(PURA):c.733C>T (p.Arg245Ter) PURA Oct 12, 2017 MedGen:CN517202 not provided germline 5 140114914 GTGGGCTCCAACAAGTACGGCGTGTTTATGCGAGTGAGCGAGGTGAAGCCCACCTATCGCA 587783081 166454 NM_003159.2(CDKL5):c.413C>T (p.Pro138Leu) CDKL5 May 03, 2013 MedGen:CN517202 not provided germline X 18581900 TTTTTTATCTTGACACTCCAGATATAAAACCAGAAAATCTCTTAATCAGCCACAATGATGT 1057524002 373328 NM_001005463.2(EBF3):c.370C>T (p.Gln124Ter) EBF3 Dec 09, 2016 MedGen:CN517202 not provided germline 10 129962212 CTCTGTTTTTTTGCAGGAGTCAGAACAGAGCAAGATCTGTATGTTCGCCTCATAGATTCAA 121918615 27964 NM_000702.3(ATP1A2):c.2936C>T (p.Pro979Leu) ATP1A2 May 16, 2017 MedGen:C0338484,Orphanet:ORPHA569,SNOMED CT:95656000;MedGen:C1865322,OMIM:602481 Familial hemiplegic migraine;Familial hemiplegic migraine type 2 germline 1 160139735 CAGGCATGGGTGTAGCCCTCCGCATGTACCCGCTCAAGTGAGTGTCTCTTTCGGGCGGCCT 869312834 226508 NM_015100.3(POGZ):c.3847C>T (p.Gln1283Ter) POGZ Mar 23, 2016 MedGen:C4225351,OMIM:616364,Orphanet:ORPHA468678 White-sutton syndrome germline 1 151405188 AAGAACTTCCTGCATAAAAAATGGAAGGAACAGGCTCGGGAAATGGCAGATACTGCATGTG 397514871 75755 NM_000368.4(TSC1):c.2698C>T (p.Gln900Ter) TSC1 Aug 09, 2013 MedGen:C1854465,OMIM:191100;MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000 Tuberous sclerosis 1;Tuberous sclerosis syndrome germline 9 132897538 AAAAACAGAAGCCATGTTCTCCAGCAGACTCAGAGGCTTGATACCTCCCAAAAACGGATTT 121918312 21020 NM_004281.3(BAG3):c.626C>T (p.Pro209Leu) BAG3 May 25, 2016 MedGen:C2751831,OMIM:612954,Orphanet:ORPHA199340;MedGen:CN517202 Myofibrillar myopathy, BAG3-related;not provided germline;unknown 10 119672373 ACCAGCTCCCGCGGGGGTACATCTCCATTCCGGTGATACACGAGCAGAACGTTACCCGGCC 104894033 15103 NM_001708.2(OPN1SW):c.790C>T (p.Pro264Ser) OPN1SW Aug 01, 1992 MedGen:C0155017,OMIM:190900,Orphanet:ORPHA88629 Tritanopia germline 7 128773786 ATGGTAGGATCCTTCTGTGTCTGCTACGTGCCCTACGCGGCCTTCGCCATGTACATGGTCA -1 468575 NM_000152.4(GAA):c.2740C>T (p.Gln914Ter) GAA May 29, 2017 MedGen:C0017921,OMIM:232300,Orphanet:ORPHA365,SNOMED CT:124462004,SNOMED CT:237967002 Glycogen storage disease, type II germline 17 80118746 GTGACTGTCCTGGGCGTGGCCACGGCGCCCCAGCAGGTCCTCTCCAACGGTGTCCCTGTCT 1060499734 389128 NM_006295.2(VARS):c.2653C>T (p.Leu885Phe) VARS Dec 11, 2017 Human Phenotype Ontology:HP:0012443,MedGen:C4021085;MedGen:CN679649,OMIM:617802 Abnormality of brain morphology;NEURODEVELOPMENTAL DISORDER WITH MICROCEPHALY, SEIZURES, AND CORTICAL ATROPHY germline;inherited 6 31780935 ACCTGACTGCTCCCACTCCACCCTCAGGGCCTCCACAACCAGCTGCTGAACAGCAACCTGG 587777656 153784 NM_006662.2(SRCAP):c.7000C>T (p.Gln2334Ter) SRCAP May 01, 2014 MedGen:C0729582,OMIM:136140,Orphanet:ORPHA2044,SNOMED CT:312214005 Floating-Harbor syndrome germline 16 30736616 CTGGAGGAGGTGAGCCGAGAGGAGCTCAAACAGGCAGAAGTGAGTATTTCCAGGGGTGGGG 121912865 32392 NM_001844.4(COL2A1):c.2155C>T (p.Arg719Cys) COL2A1 Jan 01, 1998 MedGen:C1858079,OMIM:604864,Orphanet:ORPHA93279 Osteoarthritis with mild chondrodysplasia germline 12 47982886 TCTCCCGGTGCCCAGGGCCTCCAGGGTCCCCGTGGCCTCCCCGGCACTCCTGGCACTGATG -1 465745 NM_004380.2(CREBBP):c.508C>T (p.Gln170Ter) CREBBP Jun 19, 2017 MedGen:C0035934,OMIM:180849,Orphanet:ORPHA353277,SNOMED CT:45582004 Rubinstein-Taybi syndrome germline 16 3850587 GGGCTGGCGACTAGCAGCCCTGCCACGTCACAGACTGGACCTGGTATCTGCATGAATGCTA 587777732 165951 NM_000457.4(HNF4A):c.253C>T (p.Arg85Trp) HNF4A Apr 27, 2017 MedGen:C4014962,OMIM:616026;Human Phenotype Ontology:HP:0000842,MedGen:C0020459;MedGen:CN202290,Orphanet:ORPHA263455;MedGen:CN517202 Fanconi renotubular syndrome 4 with maturity-onset diabetes of the young;Hyperinsulinemia;Hyperinsulinism due to HNF4A deficiency;not provided germline;unknown 20 44406195 TCGAGCTGTGACGGCTGCAAGGGCTTCTTCCGGAGGAGCGTGCGGAAGAACCACATGTACT -1 469692 NM_000540.2(RYR1):c.3688C>T (p.Gln1230Ter) RYR1 Apr 28, 2017 MedGen:CN239331 RYR1-Related Disorders germline 19 38469436 GAAGGCTTCGAGCCATTTGCCATCAACATGCAGCGCCCAGTCACCACCTGGTTCAGCAAAG 886039335 260314 NM_000397.3(CYBB):c.469C>T (p.Arg157Ter) CYBB Mar 25, 2015 MedGen:CN517202 not provided germline X 37793796 AGGCAAAATGAAAGTTATCTCAATTTTGCTCGAAAGAGAATAAAGGTAAGCCTCTCATTAT 121918350 22658 NM_000214.2(JAG1):c.550C>T (p.Arg184Cys) JAG1 Jun 01, 1998 MedGen:C1956125,OMIM:118450 Alagille syndrome 1 germline 20 10658612 ACGGGCGTTGCCCACTTTGAGTATCAGATCCGCGTGACCTGTGATGACTACTACTATGGCT 886041975 264866 NM_015338.5(ASXL1):c.1282C>T (p.Gln428Ter) ASXL1 Sep 15, 2016 MedGen:CN517202 not provided germline 20 32433480 ACCAGAGCCAGAAGGAATCTGTACAAAAAACAGGAGTCAGAACAAGCAGGGGTTGCTAAGG 121908492 20815 NM_003919.2(SGCE):c.1114C>T (p.Arg372Ter) SGCE Dec 13, 2016 MedGen:C1834570,OMIM:159900,Orphanet:ORPHA36899,SNOMED CT:439732004 Myoclonic dystonia germline 7 94598914 AGTGCTATTCAGAAATCTACCAAGGAGCTTCGAGACATGTCCAAGAATAGAGAGATAGCAT 58596362 29539 NM_170707.3(LMNA):c.1824C>T (p.Gly608=) LMNA Feb 04, 2016 MedGen:C0033300,OMIM:176670,Orphanet:ORPHA740,SNOMED CT:238870004;MedGen:CN236383,Orphanet:ORPHA98301;MedGen:C0406585,OMIM:275210,Orphanet:ORPHA1662,SNOMED CT:400128006;MedGen:C0432291,OMIM:248370,Orphanet:ORPHA2457,SNOMED CT:109419009;MedGen:CN517202 Hutchinson-Gilford syndrome;Laminopathy;Lethal tight skin contracture syndrome;Mandibuloacral dysostosis;not provided germline;unknown 1 156138613 ATCTGCCAGCGGCTCAGGAGCCCAGGTGGGCGGACCCATCTCCTCTGGCTCTTCTGCCTCC 587777340 132641 NM_005861.3(STUB1):c.493C>T (p.Leu165Phe) STUB1 Jan 01, 2013 MedGen:C4014261,OMIM:615768,Orphanet:ORPHA412057 Spinocerebellar ataxia, autosomal recessive 16 germline 16 681572 ATCCACCAGGAGAGCGAGCTGCACTCCTACCTCTCCAGGCTCATTGCCGCGGAGCGTGAGA 104893655 28822 NM_013953.3(PAX8):c.322C>T (p.Arg108Ter) PAX8 May 01, 1998 Human Phenotype Ontology:HP:0008188,MedGen:C1563716,OMIM:218700 Thyroid agenesis germline 2 113244494 CAGAACCCTACCATGTTTGCCTGGGAGATCCGAGACCGGCTCCTGGCTGAGGGCGTCTGTG 387906709 167455 NM_013444.3(UBQLN2):c.1490C>T (p.Pro497Leu) UBQLN2 Feb 04, 2015 MedGen:C3275459,OMIM:300857 Amyotrophic lateral sclerosis 15, with or without frontotemporal dementia germline X 56565363 CCGCTATAGGCCCTGTAGGCCCAGTCACCCCCATAGGCCCCATAGGCCCTATAGTCCCTTT 570942190 181252 NM_000527.4(LDLR):c.1246C>T (p.Arg416Trp) LDLR Mar 30, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000;MedGen:CN118841;MedGen:CN517202 Familial hypercholesterolemia;Familial hypercholesterolemias;not provided germline;inherited;not applicable 19 11113337 CGGCACGAGGTCAGGAAGATGACGCTGGACCGGAGCGAGTACACCAGCCTCATCCCCAACC 904072058 440249 NM_014927.4(CNKSR2):c.2134C>T (p.Arg712Ter) CNKSR2 Dec 09, 2017 MedGen:CN679647,OMIM:301008 MENTAL RETARDATION, X-LINKED, SYNDROMIC, HOUGE TYPE germline X 21606868 AGCCCTCCACCCCCATATGATACATACCCACGACCTCCCTCGGTAAGTTAGCAACAAGAAC 886043428 270814 NM_004006.2(DMD):c.6223C>T (p.Gln2075Ter) DMD Mar 10, 2016 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Duchenne muscular dystrophy germline X 32287596 AGTGCAACGCCTGTGGAAAGGGTGAAGCTACAGGAAGCTCTCTCCCAGCTTGATTTCCAAT 1057516124 353973 NM_172107.3(KCNQ2):c.1783C>T (p.Arg595Trp) KCNQ2 Mar 31, 2016 MedGen:C1852587,OMIM:121200 Benign familial neonatal seizures 1 germline 20 63408517 GTTCCCGGTAGAGTGGACCAGATCGTGGGGCGGGGCCCAGCGATCACGGACAAGGACCGCA 1135401795 424678 NM_015185.2(ARHGEF9):c.865C>T (p.Arg289Ter) ARHGEF9 Jan 06, 2017 MedGen:C1845102,OMIM:300607,Orphanet:ORPHA163985 Early infantile epileptic encephalopathy 8 paternal X 63674097 AATGTGACTCAGCAGATCAACGAACGCAAGCGACGTTTAGAGAATATTGACAAGATTGCTC 387907069 39912 NM_005198.4(CHKB):c.922C>T (p.Gln308Ter) CHKB Jun 10, 2011 MedGen:C1865233,OMIM:602541,Orphanet:ORPHA280671 Muscular dystrophy, congenital, megaconial type germline 22 50579979 GCAAGGCCCACAGACTACCCCACTCAAGAACAGCAGGTATGTGGGCCAGAGGCTGGGGAGC 137854431 27749 NM_004614.4(TK2):c.323C>T (p.Thr108Met) TK2 Jun 02, 2017 MedGen:C3149750,OMIM:609560;MedGen:CN517202 Mitochondrial DNA depletion syndrome 2;not provided germline 16 66531432 TGTACCACGATGCCTCTCGCTGGGGTCTTACGCTACAGACTTATGTGCAGCTCACCATGCT 104894455 29034 NM_000270.3(PNP):c.70C>T (p.Arg24Ter) PNP Jul 01, 1998 MedGen:C0268125,OMIM:613179,Orphanet:ORPHA760,SNOMED CT:60743005 Purine-nucleoside phosphorylase deficiency germline 14 20472366 GCAGAATGGCTTCTGTCTCACACTAAGCACCGACCTCAAGTTGCAATAATCTGTGGTTCTG 80356989 69812 NM_007294.3(BRCA1):c.4222C>T (p.Gln1408Ter) BRCA1 Jul 27, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline;unknown 17 43082539 GATACCATGCAACATAACCTGATAAAGCTCCAGCAGGAAATGGCTGAACTAGAAGCTGTGT 398123224 98478 NM_000169.2(GLA):c.901C>T (p.Arg301Ter) GLA Aug 04, 2015 Human Phenotype Ontology:HP:0001071,MedGen:C0002986,OMIM:301500,Orphanet:ORPHA324,SNOMED CT:16652001;MedGen:CN517202 Fabry disease;not provided germline X 101398468 GCTGCTCCTTTATTCATGTCTAATGACCTCCGACACATCAGCCCTCAAGCCAAAGCTCTCC 886041592 264743 NM_002693.2(POLG):c.925C>T (p.Arg309Cys) POLG Jul 22, 2016 MedGen:CN517202 not provided germline 15 89329041 ATGGCCATCTCAGGGCTAAGCAGCTTCCAGCGCAGTCTGTGGATAGCAGCCAAGCAGGGCA 1060503388 395630 NM_021147.4(CCNO):c.775C>T (p.Gln259Ter) CCNO Oct 17, 2016 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244 Ciliary dyskinesia germline 5 55231653 CAGGCTGAGGCCTCCGAAGCTCTGGAAGCGCAAGCCCTGGCGCGGGGGGTGGCAGAGCTGA 193921148 39156 NM_004456.4(EZH2):c.394C>T (p.Pro132Ser) EZH2 Jan 13, 2012 MedGen:C0265210,OMIM:277590,SNOMED CT:63119004 Weaver syndrome germline 7 148829818 GTGGAAGATGAAACTGTTTTACATAACATTCCTTATATGGGAGATGAAGTTTTAGATCAGG 121909231 22872 NM_000314.6(PTEN):c.1003C>T (p.Arg335Ter) PTEN Oct 05, 2017 MedGen:C0265326,OMIM:153480,Orphanet:ORPHA109;MedGen:CN072330,OMIM:158350;MedGen:C0027672,SNOMED CT:699346009;MedGen:C1854416,OMIM:605309,Orphanet:ORPHA210548;Human Phenotype Ontology:HP:0030692,MeSH:D001932,MedGen:C0006118,SNOMED CT:126952004;MedGen:C1959582,OMIM:601728,Orphanet:ORPHA306498;MedGen:C1866398,Orphanet:ORPHA2969;MedGen:CN517202 Bannayan-Riley-Ruvalcaba syndrome;Cowden syndrome 1;Hereditary cancer-predisposing syndrome;Macrocephaly/autism syndrome;Neoplasm of brain;PTEN hamartoma tumor syndrome;Proteus-like syndrome;not provided de novo;germline;somatic;unknown 10 87961095 CTTGACAAAGCAAATAAAGACAAAGCCAACCGATACTTTTCTCCAAATTTTAAGGTCAGTT 75068032 442138 NM_000435.2(NOTCH3):c.1672C>T (p.Arg558Cys) NOTCH3 Jul 01, 2016 MedGen:CN517202 not provided germline 19 15187273 GACTGCTCCCCTGACCCATGCCACCATGGTCGCTGCGTGGATGGCATCGCCAGCTTCTCAT 111033334 17400 NM_206933.2(USH2A):c.2209C>T (p.Arg737Ter) USH2A Oct 01, 2015 MedGen:C3151138,OMIM:613809;MedGen:C1848634,OMIM:276901 Retinitis pigmentosa 39;Usher syndrome, type 2A germline 1 216247185 GATCATTGCAATTTTGGATTTAAATTTCTCCGAAGCTTTAATGATGTTGGATGTGAGCCCT 281875226 39299 NM_003072.3(SMARCA4):c.2576C>T (p.Thr859Met) SMARCA4 Mar 18, 2012 MedGen:C3553249,OMIM:614609;MedGen:CN517202 Mental retardation, autosomal dominant 16;not provided germline 19 11019661 GGAGTGGGAAGTTCAACGTCTTGCTGACGACGTACGAGTACATCATCAAAGACAAGCACAT 79728106 66080 NM_000059.3(BRCA2):c.3166C>T (p.Gln1056Ter) BRCA2 Oct 14, 2016 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome germline 13 32337521 GAAATTGTAAATACCTTGGCATTAGATAATCAAAAGAAACTGAGCAAGCCTCAGTCAATTA 757369209 214096 NM_006245.3(PPP2R5D):c.157C>T (p.Pro53Ser) PPP2R5D Aug 03, 2015 MedGen:C4225354,OMIM:616355,Orphanet:ORPHA457279 Mental retardation, autosomal dominant 35 germline 6 43006514 CAGCCCCAGCCCCAAGCCCAGTCTCAGCCACCGTCATCCAACAAGCGTCCCAGCAATAGCA 128626232 26272 NM_004006.2(DMD):c.2017C>T (p.Gln673Ter) DMD Sep 01, 1995 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Duchenne muscular dystrophy germline X 32545310 TCACAGATTTCACAGGCTGTCACCACCACTCAGCCATCACTAACACAGACAACTGTAATGG 367543006 34106 NM_001024943.1(ASL):c.346C>T (p.Gln116Ter) ASL Feb 03, 2011 MedGen:C0268547,OMIM:207900,Orphanet:ORPHA23,SNOMED CT:41013004 Argininosuccinate lyase deficiency not provided 7 66082934 AAGCTGCACACGGGACGGAGCCGGAATGACCAGGTGCTTTAGCCCCTCCACCCCCTGCTCC 727503528 176305 NM_001039141.2(TRIOBP):c.6598C>T (p.Arg2200Ter) TRIOBP Nov 05, 2013 MedGen:CN043648,Orphanet:ORPHA87884 Nonsyndromic hearing loss and deafness germline 22 37769050 TGGGGCAGGTCAGATGTGGAGGCACTGAAGCGAGAGCTGCAGGTGCTATCGGAGCAGTACT 864622784 222931 NM_005879.2(TRAIP):c.52C>T (p.Arg18Cys) TRAIP Jan 29, 2016 MedGen:C4225212,OMIM:616777 Seckel syndrome 9 germline 3 49856402 ACTATCTGCTCCGACTTCTTCGATCACTCCCGCGACGTGGCCGCCATCCACTGCGGCCACA 104893846 18197 NM_172250.2(MMAA):c.283C>T (p.Gln95Ter) MMAA Jan 07, 2016 MedGen:C1855109,OMIM:251100,Orphanet:ORPHA79310 Methylmalonic aciduria cblA type germline 4 145639422 TTTGTGGATAAACTTTATACTGGTTTAATCCAAGGGCAAAGGGCCTGTTTAGCAGAGGCCA 387907031 39814 NM_020754.3(ARHGAP31):c.2047C>T (p.Gln683Ter) ARHGAP31 May 13, 2011 Gene:100188340,MedGen:CN028867,OMIM:100300 Adams-Oliver syndrome 1 germline 3 119413976 CCACCTCCTGCTCTGAAGACCAGCCCAATTCAGCCTATTCTCGAGTCGAGTCTGGGGCCCT 61749409 104973 NM_000350.2(ABCA4):c.1804C>T (p.Arg602Trp) ABCA4 Jan 22, 2016 Human Phenotype Ontology:HP:0000556,MedGen:C0854723,Orphanet:ORPHA71862,SNOMED CT:314407005;MeSH:C535804,MedGen:C1855465,OMIM:248200;MedGen:CN517202 Retinal dystrophy;Stargardt disease 1;not provided germline;unknown 1 94062710 GGTCCCAGAGCTGATCCCGTGGAAGATTTCCGGTACATCTGGGGCGGGTTTGCCTATCTGC 886039265 259364 NM_001242896.1(DEPDC5):c.3046C>T (p.Gln1016Ter) DEPDC5 Apr 13, 2016 Gene:50987,MedGen:C1858477,OMIM:604364 Epilepsy, familial focal, with variable foci 1 germline 22 31846858 CTTTAGAAAGGGACCGCCATGAAAGGCTTGCAGATGACTGGGCCCATTTCCACGCATTCTC 281864968 47695 NM_024312.4(GNPTAB):c.940C>T (p.Gln314Ter) GNPTAB May 10, 2012 MedGen:C2673377,OMIM:252500,Orphanet:ORPHA576 I cell disease not provided 12 101770579 TCATATGCCAAGTGTTTTTCTCAGTCTAAGCAGGATGAAGACATCTCTGCCAGTCGTTTTG 886039659 259879 NM_194456.1(KRIT1):c.802C>T (p.Gln268Ter) KRIT1 Jul 01, 2016 MedGen:CN517202 not provided germline 7 92234851 CCAGACTACTCAAAAATCCAAATACCTAAACAGGAAAAATGGCAGAGAAGCATGAGCAGTG 397515419 48322 NM_003846.2(PEX11B):c.64C>T (p.Gln22Ter) PEX11B May 01, 2012 MedGen:C3554055,OMIM:614920 Peroxisome biogenesis disorder 14B germline 1 145917809 ACCTTGCCTGCCCTCTCCTCTAGGGCCGCCCAGTATGCTTGCTCTCTTCTTGGCCATGCGC 886039688 259904 NM_017780.3(CHD7):c.6613C>T (p.Gln2205Ter) CHD7 Aug 01, 2016 MedGen:CN517202 not provided germline 8 60853338 GAAACCGATGGCAGCGGGAAGGAGAGCAAGCAGGAATGTGAGGCAGAGGCCAGCTCTGTGA 397514588 48378 NM_173591.3(OTOGL):c.547C>T (p.Arg183Ter) OTOGL Nov 02, 2012 MedGen:C3554159,OMIM:614944 Deafness, autosomal recessive 84b germline 12 80229341 AGCTTGTTCTTTTCAAACCAAGAGGAAATTCGAATTTATGGTCATGAAATAAAAAAGAATG 137852244 25634 NM_000133.3(F9):c.709C>T (p.Gln237Ter) F9 Sep 11, 2013 MedGen:C0008533,OMIM:306900,Orphanet:ORPHA98879,SNOMED CT:41788008 Hereditary factor IX deficiency disease germline X 139551250 GTTGTTGGTGGAGAAGATGCCAAACCAGGTCAATTCCCTTGGCAGGTACTTTATACTGATG 1085307360 414315 NM_001204.6(BMPR2):c.1483C>T (p.Q495*) BMPR2 - MedGen:C0152171,OMIM:178600,SNOMED CT:26174007 Primary pulmonary hypertension germline 2 202552785 GACCAGGATGCAGAGGCTCGGCTTACTGCACAGTGTGCTGAGGAAAGGATGGCTGAACTTA 886039332 259765 NM_001904.3(CTNNB1):c.1603C>T (p.Arg535Ter) CTNNB1 Aug 15, 2017 MedGen:C3554449,OMIM:615075,Orphanet:ORPHA404473;MedGen:CN517202 Mental retardation, autosomal dominant 19;not provided germline 3 41234217 GCACCTTTGCGTGAGCAGGGTGCCATTCCACGACTAGTTCAGTTGCTTGTTCGTGCACATC 587784122 168192 NM_022455.4(NSD1):c.4681C>T (p.Gln1561Ter) NSD1 Feb 08, 2013 MedGen:CN035106,OMIM:117550 Sotos syndrome 1 germline 5 177251769 AAATTGGGTGAGCTGCTGTTATGTGAGGCTCAGTGCTGTGGGGCTTTCCACCTGGAGTGCC 121918629 27933 NM_006920.4(SCN1A):c.5093C>T (p.Thr1698Ile) SCN1A Mar 01, 2003 MedGen:C1858673,OMIM:604403;MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002 Generalized epilepsy with febrile seizures plus, type 2;Severe myoclonic epilepsy in infancy germline 2 165992149 TTGGGATCGATGACATGTTCAACTTTGAGACCTTTGGCAACAGCATGATCTGCCTATTCCA 121434442 21846 NM_004984.3(KIF5A):c.838C>T (p.Arg280Cys) KIF5A Aug 12, 2014 MedGen:C1858712,OMIM:604187,Orphanet:ORPHA100991 Spastic paraplegia 10 germline 12 57569274 TTCCTCCCCCAGAAAAGCTATGTTCCATATCGTGACAGCAAAATGACAAGGATTCTCCAGG 143083947 203835 NM_000026.3(ADSL):c.5C>T (p.Ala2Val) ADSL Apr 09, 2012 MedGen:CN517202 not provided germline 22 40346563 CACCCTGGCGGGGTCGCAGGGTTGGGATGGCGGCTGGAGGCGATCATGGTTCGCCCGACAG 1057521138 379245 NM_003639.4(IKBKG):c.502C>T (p.Gln168Ter) IKBKG Jan 12, 2017 MedGen:CN517202 not provided germline X 154558634 AGTCGCTTGGAGGCTGCCACTAAGGAATGCCAGGCTCTGGAGGGTCGGTGAGTCGGGGGAG 397514608 48418 NM_001277269.1(OTOG):c.6559C>T (p.Arg2187Ter) OTOG Nov 27, 2012 MedGen:C3554163,OMIM:614945 Deafness, autosomal recessive 18b germline 11 17613696 GCCCATCAGGTCACTATTGATCGCTTCAACCGAAAGGTGAGTGCATCAAACAGCCAGCCTC 137853103 23059 NM_005327.4(HADH):c.773C>T (p.Pro258Leu) HADH Aug 01, 2001 MedGen:C1864948,OMIM:609975 Hyperinsulinemic hypoglycemia, familial, 4 germline 4 108033239 TGAAATTAGGAGCCGGTTACCCCATGGGCCCATTTGAGCTTCTAGATTATGTCGGACTGGA 137853244 29982 NM_000545.6(HNF1A):c.391C>T (p.Arg131Trp) HNF1A Aug 17, 2017 MedGen:C1838100,OMIM:600496;MedGen:CN517202 Maturity-onset diabetes of the young, type 3;not provided germline 12 120988897 TCCTACCTGCAGCAGCACAACATCCCACAGCGGGAGGTGGTCGATACCACTGGCCTCAACC 753254213 364923 NM_020247.4(COQ8A):c.1228C>T (p.Arg410Ter) COQ8A Jun 15, 2015 MedGen:CN517202 not provided germline 1 226983826 CGGGAGCTGGCCCTGGAGTGTGACTACCAGCGAGAGGCCGCCTGTGCCCGCAAGTTCAGGT 281865549 39933 NM_018081.2(WRAP53):c.1126C>T (p.His376Tyr) WRAP53 May 10, 2012 MedGen:C3151442,OMIM:613988 Dyskeratosis congenita, autosomal recessive, 3 germline 17 7702514 CACCAAGGGGGCATCACCCACCTCTGCTTTCATCCCGATGGCAACCGCTTCTTCTCAGGAG 864309642 200390 NM_015340.3(LARS2):c.899C>T (p.Thr300Met) LARS2 Dec 10, 2015 MedGen:C3809105,OMIM:615300;MedGen:C3809105,OMIM:615300 Perrault syndrome 4;Perrault syndrome 4 germline 3 45476508 AAGCCACGGGCGAAAAGCTGACTGCCTATACGGCCACCCCTGAAGCCATTTATGGCACCTC 587784129 168202 NM_022455.4(NSD1):c.4907C>T (p.Ser1636Phe) NSD1 Feb 08, 2013 MedGen:CN035106,OMIM:117550 Sotos syndrome 1 germline 5 177257092 CTGTTATGCAGAACAAGGGCTTCCGGTGCTCCCTCCACATCTGTATAACCTGTCATGCTGC 137886232 39244 NM_002878.3(RAD51D):c.757C>T (p.Arg253Ter) RAD51D Dec 15, 2016 MedGen:C3280345,OMIM:614291;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 4;Hereditary cancer-predisposing syndrome;not provided germline;unknown 17 35101347 TTTCTGCTGCAGGTGACCAACCACATAACTCGAGACAGGGACAGCGGGAGGCTCAAACCTG 587779343 96837 NM_000535.6(PMS2):c.697C>T (p.Gln233Ter) PMS2 May 05, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0009405,Orphanet:ORPHA443090;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Hereditary nonpolyposis colon cancer;Lynch syndrome;not provided germline 7 5999116 ATAAAGGAAAATATCGGCTCTGTGTTTGGGCAGAAGCAGGTAGTGATGGCCGGTTACTTCA 145541911 102933 NM_015662.2(IFT172):c.886C>T (p.Arg296Trp) IFT172 Feb 10, 2014 MedGen:C4017084 Short-rib thoracic dysplasia 10 without polydactyly germline 2 27480049 TTATACACCATCACTGCCTTGGCCTGGAAGCGGGATGGCTCACGGCTCTGTGTGGTGTGTT 748718975 226666 NM_001937.4(DPT):c.544C>T (p.Arg182Cys) DPT Mar 01, 2016 Human Phenotype Ontology:HP:0000408,MedGen:C1843156 Progressive sensorineural hearing impairment inherited 1 168696611 TCATTTTCTGACTCTCCCTCCCACAGGGATCGCCAGTGGAAGTTCATAATGTGCCGGATGA 876657699 229152 NM_000248.3(MITF):c.808C>T (p.Arg270Ter) MITF Jan 12, 2016 MedGen:C3266898,Orphanet:ORPHA3440,SNOMED CT:47434006 Waardenburg syndrome germline 3 69959370 GAACAGCAACGCGCAAAAGAACTTGAAAACCGACAGAAGAAACTGGAGCACGCCAACCGGC 794728631 197519 NM_130799.2(MEN1):c.1660C>T (p.Gln554Ter) MEN1 Mar 17, 2017 MedGen:C0027672,SNOMED CT:699346009;MeSH:D018761,MedGen:C0025267,OMIM:131100,Orphanet:ORPHA652,SNOMED CT:30664006;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Multiple endocrine neoplasia, type 1;not provided germline 11 64804507 CCACCGCCGGAGGGTCCAGTGCTCACTTTCCAGAGTGAGAAGATGAAGGGCATGAAGGAGC 587783562 169883 NM_178151.2(DCX):c.556C>T (p.Arg186Cys) DCX Mar 30, 2017 Human Phenotype Ontology:HP:0002282,MedGen:C0008519;MedGen:CN517202 Heterotopia;not provided germline X 111401139 TTTGTGCGCCCCAAGCTGGTTACCATCATCCGCAGTGGGGTGAAGCCTCGGAAGGCTGTGC 199422134 34444 NM_018136.4(ASPM):c.577C>T (p.Gln193Ter) ASPM Jan 09, 2015 MedGen:C1837501,OMIM:608716 Primary autosomal recessive microcephaly 5 germline 1 197143675 CAAAAAGTTGACAGAGTTAGGAGCCCACTACAAGCTTGTGAAAACTTGGCTATGAATGAAG 371678190 172968 NM_001256850.1(TTN):c.63526C>T (p.Arg21176Ter) TTN Aug 14, 2017 EFO:EFO_0000407,Human Phenotype Ontology:HP:0001644,MedGen:C0007193,Orphanet:ORPHA217604,SNOMED CT:195021004;MedGen:CN517202 Primary dilated cardiomyopathy;not provided germline 2 178578066 GGATTAACTGAAGGTCTTGAATATGAATTCCGAGTTATGGCAATCAATTTAGCAGGTGTGG 61752117 21505 NM_004813.2(PEX16):c.526C>T (p.Arg176Ter) PEX16 May 28, 2015 MedGen:C3553959,OMIM:614876;MedGen:CN517202 Peroxisome biogenesis disorder 8A;not provided germline 11 45914619 TACGTGGGGAAGCGGTCAAACCGGGTGGTGCGAACCCTCCAGAACAGTAAGTGGAGGATGT 121434616 26378 NM_003588.3(CUL4B):c.1162C>T (p.Arg388Ter) CUL4B Nov 29, 2014 Human Phenotype Ontology:HP:0001999,MedGen:C0424503;Human Phenotype Ontology:HP:0001263,MedGen:C4020875;Human Phenotype Ontology:HP:0001249,MedGen:C1843367;Human Phenotype Ontology:HP:0001250,MedGen:C0036572;Human Phenotype Ontology:HP:0004322,MedGen:C0349588;Gene:114890,MedGen:C1845861,OMIM:300354,Orphanet:ORPHA85293 Abnormal facial shape;Global developmental delay;Intellectual disability;Seizures;Short stature;Syndromic X-linked mental retardation, Cabezas type germline;unknown X 120544179 CTCCAGATTTATCAAGATTCTTTTGAACAACGATTTTTGGAAGAAACTAACCGGCTCTATG 397507541 49023 NM_002834.4(PTPN11):c.1492C>T (p.Arg498Trp) PTPN11 Jul 14, 2017 MedGen:CN074218,OMIM:151100;MedGen:CN166718,Orphanet:ORPHA98733;MedGen:CN517202 LEOPARD syndrome 1;Rasopathy;not provided germline;unknown 12 112489068 ATTGACGTTCCCAAAACCATCCAGATGGTGCGGTCTCAGAGGTCAGGGATGGTCCAGACAG 606231455 171043 NM_001114748.1(TMEM240):c.511C>T (p.Arg171Trp) TMEM240 Oct 01, 2014 MedGen:C1843891,OMIM:607454,Orphanet:ORPHA98773 Spinocerebellar ataxia 21 germline 1 1535370 AAACTCTACCACAATGGCCACCCCAGCCCGCGGCACCTGTGAGCCGCACGGGGACTTACCG 1064796614 411417 NM_001111125.2(IQSEC2):c.3250C>T (p.Gln1084Ter) IQSEC2 Feb 24, 2017 MedGen:CN517202 not provided germline X 53238172 TCCGACCTGCGCGAGTCCATTGCGGAGGTGCAGGAGATGGAGAAATACCGTGTGGAGTGTG 201044262 205000 NM_005045.3(RELN):c.2015C>T (p.Pro672Leu) RELN Aug 27, 2015 MedGen:C4225327,OMIM:616436 Epilepsy, familial temporal lobe, 7 germline 7 103640597 TCTTTTTCCCTCCCACAGTTTATATTGGCCCGTCATGTCTCAAATTCTGTTCTGGCAGAGG 199469653 106396 NM_003590.4(CUL3):c.1207-3C>T CUL3 - Gene:7830,MedGen:C1449844,OMIM:145260,Orphanet:ORPHA757,SNOMED CT:15689008 Pseudohypoaldosteronism, type 2 germline 2 224503825 TTGTATAATTGTTACATCATCTTAATTTTGCAGCTAACAGAACAAGAAGTAGAAACAATAT 61754424 153318 NM_004992.3(MECP2):c.46C>T (p.Gln16Ter) MECP2 Mar 31, 2003 MedGen:CN517202 not provided unknown X 154032538 TAACACTTCAGGGAAGAAAAGTCAGAAGACCAGGACCTCCAGGGCCTCAAGGACAAACCCC 1064796472 410844 NM_032195.2(SON):c.3334C>T (p.Arg1112Ter) SON Feb 26, 2017 MedGen:CN517202 not provided germline 21 33552565 TCTATGATGTCATCGTACTCTGCAGCTGACCGATCTATGATGTCATCTTATACTGCTGATC 145146218 226849 NM_014669.4(NUP93):c.1162C>T (p.Arg388Trp) NUP93 Apr 06, 2016 MedGen:C4225166,OMIM:616892 Nephrotic syndrome, type 12 germline 16 56831918 GCCCTCAGGAACAATACAGATCCCTACAAGCGGGCCGTGTACTGTATCATTGGCAGATGTG 387906973 39635 NM_057179.2(TWIST2):c.355C>T (p.Gln119Ter) TWIST2 Aug 13, 2010 MedGen:C1744559,OMIM:227260,SNOMED CT:239051001 Congenital ectodermal dysplasia of face germline 2 238848570 CTGGCCGCCAGGTACATAGACTTCCTCTACCAGGTCCTGCAGAGCGACGAGATGGACAATA 137854568 15837 NM_000038.5(APC):c.904C>T (p.Arg302Ter) APC Apr 22, 2017 MedGen:C1858438;MedGen:CN240755;MedGen:C2713442,OMIM:175100;MedGen:C0017097,Orphanet:ORPHA79665,SNOMED CT:60876000;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Colorectal cancer, susceptibility to;Familial adenomatous polyposis;Familial adenomatous polyposis 1;Gardner syndrome;Hereditary cancer-predisposing syndrome;not provided germline;unknown 5 112815564 TTGAGTTCTAGTAGCACACACTCTGCACCTCGAAGGCTGACAAGTCATCTGGGAACCAAGG 387906432 25191 NM_000132.3(F8):c.43C>T (p.Arg15Ter) F8 Apr 01, 1992 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 155022510 CTCTCCACCTGCTTCTTTCTGTGCCTTTTGCGATTCTGCTTTAGTGCCACCAGAAGATACT 149592537 130985 NM_001080442.2(SLC38A8):c.598C>T (p.Gln200Ter) SLC38A8 Dec 05, 2013 MedGen:C4017389 Foveal hypoplasia 2 and optic nerve misrouting with or without anterior segment dysgenesis germline 16 84031901 GTCATCACCGTGCAGTACTACCTCTGGCCCCAGGGCCTCGTGCGTGAGTCCCATCCTTCAC 786205508 188889 NM_017777.3(MKS1):c.1066C>T (p.Gln356Ter) MKS1 - MedGen:C0265215,Orphanet:ORPHA564,SNOMED CT:29076005;MedGen:CN517202 Meckel-Gruber syndrome;not provided germline 17 58208542 CCAGCATTCCAGCAGCTCTCAGGAGTAACACAGACCTGCACCACCAAGTCCCTGGCAATGG 886041614 264340 NM_016628.4(WAC):c.451C>T (p.Arg151Ter) WAC Aug 23, 2017 MedGen:CN517202 not provided germline 10 28589805 TCTTCTGGGAAAAAGTACTACTACAATTGTCGAACAGAAGTTTCACAATGGGAAAAACCAA 765824628 259635 NM_019026.4(TMCO1):c.340C>T (p.Arg114Ter) TMCO1 Jun 20, 2016 MedGen:CN517202 not provided germline 1 165759546 AAGAAGGAAACAATAACAGAGTCAGCTGGTCGACAACAGAAAAAGAAAATAGGTAAGATGA 387907314 45879 NM_006343.2(MERTK):c.2323C>T (p.Arg775Ter) MERTK Jul 01, 2012 MedGen:C3151228,OMIM:613862 Retinitis pigmentosa 38 germline 2 112021555 AAATGGATCGCCATAGAAAGTCTTGCAGACCGAGTCTACACAAGTAAAAGTGATGTGGTAT 63749827 95821 NM_000249.3(MLH1):c.76C>T (p.Gln26Ter) MLH1 Apr 12, 2017 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:CN517202 Lynch syndrome;not provided germline 3 36993623 GTGAACCGCATCGCGGCGGGGGAAGTTATCCAGCGGCCAGCTAATGCTATCAAAGAGATGA -1 453855 NM_000297.3(PKD2):c.1774C>T (p.Arg592Ter) PKD2 Feb 14, 2017 MedGen:CN119611 Polycystic kidney disease, autosomal dominant germline 4 88056143 ACCATGAGCCAGCTCTCGACAACCATGTCTCGATGTGCCAAAGACCTGTTTGGCTTTGCTA 794726697 187802 NM_001165963.1(SCN1A):c.2593C>T (p.Arg865Ter) SCN1A Feb 06, 2017 MedGen:C0393706,Orphanet:ORPHA1934;MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002;MedGen:CN517202 Early infantile epileptic encephalopathy;Severe myoclonic epilepsy in infancy;not provided germline;paternal 2 166038129 AATATATATTAATCTTTCATTTTCCAGCTGCGAGTTTTCAAGTTGGCAAAATCTTGGCCAA 119470017 19005 NM_000356.3(TCOF1):c.2731C>T (p.Arg911Ter) TCOF1 Jul 15, 2004 MedGen:CN119605,OMIM:154500 Treacher Collins syndrome 1 germline 5 150388004 GCCCAGGCTGCAAGCACCCCGAGGAAGGCCCGAGCCTCGGAGAGCACAGCCAGGAGCTCCT 128624220 26340 NM_000033.3(ABCD1):c.1252C>T (p.Arg418Trp) ABCD1 May 15, 2017 MedGen:C0162309,OMIM:300100,Orphanet:ORPHA43,SNOMED CT:65389002;MedGen:CN517202 Adrenoleukodystrophy;not provided germline X 153736372 CAGGTGACGGAGCTGGCTGGCTACACAGCCCGGGTGCACGAGATGTTCCAGGTATTTGAAG 1131692297 424533 NM_000280.4(PAX6):c.265C>T (p.Gln89Ter) PAX6 - MedGen:C0344542,OMIM:106210 Aniridia 1 de novo;paternal 11 31801653 GCGACTCCAGAAGTTGTAAGCAAAATAGCCCAGTATAAGCGGGAGTGCCCGTCCATCTTTG 387907131 40140 NM_001044385.2(TMEM237):c.76C>T (p.Gln26Ter) TMEM237 Feb 23, 2015 MedGen:C3280766,OMIM:614424 Joubert syndrome 14 germline;unknown 2 201640264 AATTTGTTTGGTGTTATATGACGTGTTAGTCAAGGTGAGTTAGTTTAATGTAAATATAATA 1131691674 421703 NM_000118.3(ENG):c.526C>T (p.Gln176Ter) ENG May 17, 2017 MedGen:CN517202 not provided germline 9 127825858 AGGGACTGAGGTGCGCGTGTCTCTGCAGCCCAGGGGTCACTGTCCTTCTGCATGCTGGAAG 587777653 153777 NM_001286577.1(C2CD3):c.184C>T (p.Arg62Ter) C2CD3 Feb 23, 2015 Human Phenotype Ontology:HP:0002335,MedGen:C0431399,Orphanet:ORPHA475,SNOMED CT:253175003,SNOMED CT:716997004;MedGen:C4014780,OMIM:615948,Orphanet:ORPHA434179 Joubert syndrome;Orofaciodigital syndrome xiv germline;unknown 11 74168485 ATTGCAAAGCCTCCCACTTGTGTACTTGTCCGAGTGAGATGGTGGGGAGAAACATCAGATG 1057518650 361256 NM_153252.4(BRWD3):c.568C>T (p.Arg190Ter) BRWD3 Feb 17, 2015 MedGen:C1970841,OMIM:300659 Mental retardation, X-linked 93 de novo X 80745592 TTGTCATCTGTCTACTGTGTAGCATTTGACCGAAGCGGGAGAAGAATTTTTACAGTGAGTG 869312712 225886 NM_020732.3(ARID1B):c.2242C>T (p.Gln748Ter) ARID1B Jan 14, 2016 MedGen:CN029606,OMIM:135900 Coffin-Siris syndrome 1 de novo 6 157084866 TCTCCTGTTGGCTCTCCTGTAGGAAGCAACCAGTCTCGATCTGGCCCAATCTCTCCTGCAA 267606875 18588 NM_016247.3(IMPG2):c.2890C>T (p.Arg964Ter) IMPG2 Aug 13, 2010 MedGen:C3150819,OMIM:613581 Retinitis pigmentosa 56 germline 3 101242820 TTCAGAAATGGCAGCATTGTGGTGAACAGTCGAATGAAGTTTGCCAATTCTGTCCCTCCTA 398124225 101283 NM_006363.5(SEC23B):c.1571C>T (p.Ala524Val) SEC23B Nov 18, 2013 MedGen:CN517202 not provided germline 20 18543078 ACATAGAAGCAGCATTTGACCAGGAGGCTGCGGCAGTGTTGATGGCACGGCTTGGGGTGTT 121908738 17003 NM_000022.3(ADA):c.821C>T (p.Pro274Leu) ADA Aug 01, 1990 MedGen:C1863239;MedGen:C1863236,OMIM:102700,Orphanet:ORPHA277 Partial adenosine deaminase deficiency;Severe combined immunodeficiency due to ADA deficiency germline;unknown 20 44622612 GGTCCAGCTACCTCACTGGTGCCTGGAAGCCGGACACGGAGCATGCAGTCATTCGGTGAGC 775036118 475938 NM_000051.3(ATM):c.5692C>T (p.Arg1898Ter) ATM Apr 10, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 11 108307914 TTTTGTTTGTCAGAGTCAGAGCACTTTTTCCGATGCTGTTTGGATAAAAAATCACAAAGAA 75399846 166076 NM_000278.4(PAX2):c.706C>T (p.Gln236Ter) PAX2 Mar 01, 2012 MedGen:C1852759,OMIM:120330,Orphanet:ORPHA1475,SNOMED CT:446449009;MedGen:CN517202 Renal coloboma syndrome;not provided germline;unknown 10 100806519 AAGCACTTGCGAGCTGACACCTTCACCCAGCAGCAGCTGGAAGCTTTGGATCGGGTCTTTG 879254408 245376 NM_000527.4(LDLR):c.103C>T (p.Gln35Ter) LDLR Mar 25, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11100258 GACAGATGCGAAAGAAACGAGTTCCAGTGCCAAGACGGGAAATGCATCTCCTACAAGTGGG 104893630 23193 NM_080916.2(DGUOK):c.313C>T (p.Arg105Ter) DGUOK Aug 01, 2002 MedGen:C3151513,OMIM:251880,Orphanet:ORPHA279934 Mitochondrial DNA-depletion syndrome 3, hepatocerebral germline 2 73946776 TTGCTGGATATGATGTACCGGGAGCCAGCACGATGGTCCTACACATTCCAGACATTTTCCT 104893906 24055 NM_004387.3(NKX2-5):c.568C>T (p.Arg190Cys) NKX2-5 May 15, 2005 MedGen:C1862388,OMIM:108900 Atrial septal defect 7 with or without atrioventricular conduction defects germline 5 173232976 ACGCAGGTCAAGATCTGGTTCCAGAACCGGCGCTACAAGTGCAAGCGGCAGCGGCAGGACC 201286421 50215 NM_003001.3(SDHC):c.43C>T (p.Arg15Ter) SDHC Sep 25, 2017 MedGen:C1708353,Orphanet:ORPHA29072;MedGen:C0027672,SNOMED CT:699346009;MedGen:C1854336,OMIM:605373;MedGen:CN517202 Hereditary Paraganglioma-Pheochromocytoma Syndromes;Hereditary cancer-predisposing syndrome;Paragangliomas 3;not provided germline 1 161323636 TCTTGCAGACACGTTGGTCGTCATTGCCTCCGAGCCCACTTTAGCCCTCAGCTCTGTATCA 387907216 44161 NM_017636.3(TRPM4):c.490C>T (p.Arg164Trp) TRPM4 Aug 01, 2010 Gene:8184,MedGen:C1970298,OMIM:604559 Progressive familial heart block type 1B germline 19 49168301 GTCACTGGGGGTCTGCACACGGGCATCGGCCGGCATGTTGGTGTGGCTGTACGGGACCATC 199476094 23235 NM_001009944.2(PKD1):c.12124C>T (p.Gln4042Ter) PKD1 Aug 01, 1995 MedGen:C0085413,OMIM:173900,SNOMED CT:28728008 Polycystic kidney disease, adult type germline 16 2090688 GGCCTGGTGGTGCTCGGGGTAGCCTACGCCCAGCTGGCCATCCTGGTAGGTGACTGCGCGG 104894471 17089 NM_152443.2(RDH12):c.184C>T (p.Arg62Ter) RDH12 Oct 01, 2004 MedGen:C2675186,OMIM:612712 Leber congenital amaurosis 13 germline 14 67724588 GGCAAGGAGACGGCCAGAGAGCTCGCTAGCCGAGGTAAGTGTTTCCCCTTTAGTCTCCAAA 199473556 78702 NM_198056.2(SCN5A):c.361C>T (p.Arg121Trp) SCN5A May 24, 2017 MedGen:C1142166,Orphanet:ORPHA130,SNOMED CT:418818005;MedGen:CN029323,OMIM:601144;MedGen:CN517202 Brugada syndrome;Brugada syndrome 1;not provided germline;unknown 3 38630342 TTGTATGTCCTCAGTCCCTTCCACCCCATCCGGAGAGCGGCTGTGAAGATTCTGGTTCACT 104894912 25542 NM_020061.5(OPN1LW):c.739C>T (p.Arg247Ter) OPN1LW Nov 01, 1993 Human Phenotype Ontology:HP:0007939,MedGen:C0339537,OMIM:303700,Orphanet:ORPHA16,SNOMED CT:24704003 Cone monochromatism germline X 154154734 CTCTGCTACCTCCAAGTGTGGCTGGCCATCCGAGCGGTAAGCCCCCCGATTCCTCCTGGCC 1064794957 409927 NM_139276.2(STAT3):c.2144C>T (p.Pro715Leu) STAT3 Apr 11, 2017 MedGen:CN517202 not provided germline 17 42317182 ACCTGAAGACCAAGTTTATCTGTGTGACACCGTAAGTGGCTTCCTTTCCCCGTTTTGCCTT 132630305 26098 NM_000252.2(MTM1):c.721C>T (p.Arg241Cys) MTM1 May 26, 2017 MedGen:C0410203,OMIM:310400,Orphanet:ORPHA596,SNOMED CT:46804001 Severe X-linked myotubular myopathy germline X 150645725 ATTCATCCAGAAAATAAGACGGTCATTGTGCGTTGCAGTCAGCCTCTTGTCGGTATGAGTG 879253889 244244 NM_001012331.1(NTRK1):c.526C>T (p.Gln176Ter) NTRK1 Feb 24, 2017 MedGen:CN517202 not provided germline 1 156868201 GGACTGGGCGGAGTGCCTGAACAGAAGCTGCAGTGTCATGGGCAAGGGCCCCTGGCCCACA 121917901 16740 NM_000124.3(ERCC6):c.2203C>T (p.Arg735Ter) ERCC6 Jun 02, 2017 MedGen:C0751038,OMIM:133540,Orphanet:ORPHA90322;MedGen:C0265201,OMIM:278800,SNOMED CT:414673004;MedGen:CN239385;MedGen:CN517202 Cockayne syndrome B;DE SANCTIS-CACCHIONE SYNDROME;ERCC6-Related Disorders;not provided germline 10 49478437 AAAACTGCTTACAAGTGTGCATGTGTCTTACGAGATACCATAAATCCATACCTACTGCGGA 483353046 139373 NM_000079.3(CHRNA1):c.737C>T (p.Ser246Phe) CHRNA1 Jun 15, 1999 MedGen:C0751885,OMIM:601462 Myasthenic syndrome, slow-channel congenital germline 2 174753544 TCAACGTCATCATCCCCTGCCTGCTCTTCTCCTTCTTAACTGGCCTGGTATTCTACCTGCC 104894390 31678 NM_000115.4(EDNRB):c.757C>T (p.Arg253Ter) EDNRB Nov 05, 1999 MedGen:C1848519,OMIM:277580 Waardenburg syndrome type 4A germline 13 77903200 ATTACGATGGACTACAAAGGAAGTTATCTGCGAATCTGCTTGCTTCATCCCGTTCAGAAGA 769737896 228156 NM_000527.4(LDLR):c.1048C>T (p.Arg350Ter) LDLR Aug 25, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000;MedGen:CN517202 Familial hypercholesterolemia;not provided germline;inherited 19 11110759 TGCCCCGACGGCTTCCAGCTGGTGGCCCAGCGAAGATGCGAAGGTGATTCCCGGGTGGGAC 104893778 28068 NM_000539.3(RHO):c.1030C>T (p.Gln344Ter) RHO Oct 01, 1994 MedGen:C3151001,OMIM:613731 Retinitis pigmentosa 4 germline 3 129533701 TCTGCTACCGTGTCCAAGACGGAGACGAGCCAGGTGGCCCCGGCCTAAGACCTGCCTAGGA 137854497 24535 NM_005502.3(ABCA1):c.4517C>T (p.Ser1506Leu) ABCA1 Jul 27, 2001 MedGen:C0039292,OMIM:205400,Orphanet:ORPHA31150 Tangier disease germline 9 104804668 TCCTTCAGGACCTGACAGGAAGAAACATTTCGGATTATCTGGTGAAGACGTATGTGCAGAT 886044824 268481 NM_001110556.1(FLNA):c.5278C>T (p.Gln1760Ter) FLNA Nov 05, 2015 Gene:8268,MedGen:C1848221,OMIM:300048;MedGen:C1848213,OMIM:300049,OMIM:300537,SNOMED CT:448227009 Intestinal pseudoobstruction neuronal chronic idiopathic X-linked;Periventricular nodular heterotopia 1 germline X 154354651 CCCCCTCTACGGTCTCAGCAGCTGGCCCCACAGTACACCTACGCCCAGGGCGGCCAGCAGA 1060501456 394730 NM_001369.2(DNAH5):c.12265C>T (p.Gln4089Ter) DNAH5 Jul 31, 2016 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244 Ciliary dyskinesia germline 5 13721014 CAGGAAGTCCATGCTCGGAAGCTCTTGCAGCAGACCATGGCGAACGTAAGGCTGAATAGTC 111033800 18649 NM_000155.3(GALT):c.997C>T (p.Arg333Trp) GALT May 18, 2017 MedGen:C0268151,OMIM:230400,Orphanet:ORPHA79239,SNOMED CT:124354006 Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase germline;unknown 9 34649502 TACCCTCCGCTCCTGCGCTCTGCCACTGTCCGGAAATTCATGGTTGGCTACGAAATGCTTG 772989270 214243 NM_001134831.1(AHI1):c.2012C>T (p.Thr671Ile) AHI1 Feb 23, 2015 MedGen:C1837713,OMIM:608629 Joubert syndrome 3 unknown 6 135438399 CCTGGTCAAAAGATGATCACTACATCCTTACTTCATCATCTGATGGCACTGCCAGGTTAGT 80359115 67294 NM_000059.3(BRCA2):c.8575C>T (p.Gln2859Ter) BRCA2 Aug 02, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline 13 32371043 AAGGAAGCAGCAAAATATGTGGAGGCCCAACAAAAGAGACTAGAAGCCTTATTCACTAAAA 199476186 47866 NM_207352.3(CYP4V2):c.253C>T (p.Arg85Cys) CYP4V2 Apr 12, 2012 MedGen:C1859486,OMIM:210370,Orphanet:ORPHA41751 Bietti crystalline corneoretinal dystrophy not provided 4 186194538 CAGCAGATCATTGAGTACACAGAGGAATACCGCCACATGCCGCTGCTGAAGCTCTGGGTCG 797044863 205350 NM_018684.3(ZC4H2):c.148C>T (p.Gln50Ter) ZC4H2 - MeSH:D030342,MedGen:C0950123 Inborn genetic diseases germline X 64921894 TCAGAGGAAAGGCACCTGAAGGAATACAAGCAGGAGATGGACCTTCTGCTACAGGAGAAGA 121908498 20806 NM_004211.4(SLC6A5):c.1274C>T (p.Thr425Met) SLC6A5 Oct 04, 2012 MedGen:C3553288,OMIM:614618 Hyperekplexia 3 germline 11 20626721 GCCCATGGCTTTTCTAGGTGGTGTACTTCACGGCCACGTTCCCGTATGTCGTACTCGTGAT 876658571 232436 NM_000465.3(BARD1):c.277C>T (p.Gln93Ter) BARD1 Feb 23, 2015 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 2 214792384 TGTCCAGTGTGTTACACCCCGGCCTGGATACAAGACTTGAAGATAAATAGACAACTGGACA 63749885 33169 NM_000021.3(PSEN1):c.487C>T (p.His163Tyr) PSEN1 Oct 01, 1995 MedGen:C1843013,OMIM:607822;MedGen:CN517202 Alzheimer disease, type 3;not provided germline 14 73186859 ATATTGAAATGCTTTCTTTTCTAGGTCATCCATGCCTGGCTTATTATATCATCTCTATTGT 770485731 464162 NM_000153.3(GALC):c.1186C>T (p.Arg396Trp) GALC May 08, 2017 MedGen:C0023521,OMIM:245200,Orphanet:ORPHA487,SNOMED CT:192782005 Galactosylceramide beta-galactosidase deficiency germline 14 87950724 TTTCAGAGTCATAAACATTCTAAGTGCATACGGCCATTTCTTCCTTATTTCAATGTGTCAC 886042033 264994 NM_144997.5(FLCN):c.1504C>T (p.Gln502Ter) FLCN Oct 17, 2016 MedGen:CN517202 not provided germline 17 17215019 AACCAGAACCTGTCTGTGGATGTGGTGGACCAGTGCCTCGTCTGCCTCAAGGAGGAGTGGA 398123151 98334 NM_000071.2(CBS):c.1006C>T (p.Arg336Cys) CBS Mar 16, 2017 MedGen:C3150344,OMIM:236200;MedGen:CN517202 Homocystinuria due to CBS deficiency;not provided germline;unknown 21 43062344 AGCAACGATGAGGAGGCGTTCACCTTTGCCCGCATGCTGATCGCGCAAGAGGGGCTGCTGT -1 481475 NM_145207.2(SPATA5):c.394C>T (p.Gln132Ter) SPATA5 Sep 08, 2017 MedGen:C4225276,OMIM:616577,Orphanet:ORPHA457351 Epilepsy, hearing loss, and mental retardation syndrome maternal 4 122929145 GGTGTGAGGCCTGGTGATGCCATCCAGGTCCAGCCTCTTGTGGGTGCTGTGCTACAGGCTG 397514573 48342 NM_005881.3(BCKDK):c.466C>T (p.Arg156Ter) BCKDK Oct 19, 2012 MedGen:C3554078,OMIM:614923,Orphanet:ORPHA308410 Branched-chain keto acid dehydrogenase kinase deficiency germline 16 31110247 GCGGACGAGGCCCAGTACTGCCAGCTGGTGCGACAGCTGCTGGATGACCACAAGGATGTGG 28939084 19984 NM_024022.2(TMPRSS3):c.1211C>T (p.Pro404Leu) TMPRSS3 Oct 01, 2005 MedGen:C1832827,OMIM:601072,OMIM:605316 Deafness, autosomal recessive 8 germline 21 42375852 TTCCTGTCACCCAGGGGGACAGCGGGGGGCCCCTGGTGTGTCAAGAGAGGAGGCTGTGGAA 727503780 172321 NM_006726.4(LRBA):c.2032C>T (p.Gln678Ter) LRBA Jan 27, 2015 MedGen:C3553512,OMIM:614700,Orphanet:ORPHA445018 Common variable immunodeficiency 8, with autoimmunity germline 4 150896429 AAGGATTCTGGAGTAAAGGAAGATGAATTACAGGCCATTCTTAATTACCTACTGACTATGC -1 479071 NM_000267.3(NF1):c.7699C>T (p.Gln2567Ter) NF1 Aug 22, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 17 31356983 GCTGCAGAAACTCAGAGGATTTCCTCATCACAACAGCACCCACATTTACGTAAAGTTTCAG 137852748 23844 NM_001204.6(BMPR2):c.2617C>T (p.Arg873Ter) BMPR2 Sep 01, 2000 MedGen:C0152171,OMIM:178600,SNOMED CT:26174007 Primary pulmonary hypertension germline 2 202556282 AGTCCTGATGAGCATGAGCCTTTACTGAGACGAGAGCAACAAGCTGGCCATGATGAAGGTG 122456135 26656 NM_005183.3(CACNA1F):c.2683C>T (p.Arg895Ter) CACNA1F Jul 01, 1998 MedGen:C1848172,OMIM:300071 Congenital stationary night blindness, type 2A germline X 49219344 AGTGTGTCCCTGGCCGCTGAGGACCCCATCCGAGCCCACTCCTTCCGCAACCATGTGAGCC 281865489 47585 NM_004614.4(TK2):c.268C>T (p.Arg90Cys) TK2 Jul 18, 2017 MedGen:C3149750,OMIM:609560;MedGen:CN517202 Mitochondrial DNA depletion syndrome 2;not provided germline 16 66536981 ACGGAGCCTGTGTCCAAGTGGAGAAATGTCCGTGGCCACAATCCTCTGGTGAGTGGGTTGT 137852979 19511 NM_177438.2(DICER1):c.1630C>T (p.Arg544Ter) DICER1 May 08, 2017 MedGen:CN072455,OMIM:601200;Human Phenotype Ontology:HP:0100528,MedGen:C1266144,Orphanet:ORPHA64742 DICER1-related pleuropulmonary blastoma cancer predisposition syndrome;Pleuropulmonary blastoma germline 14 95116575 GTGGTTCGTTTTGATTTGCCCACAGAATATCGATCCTATGTTCAATCTAAAGGAAGAGCAA 755584106 358212 NM_000053.3(ATP7B):c.4114C>T (p.Gln1372Ter) ATP7B Jul 22, 2016 MedGen:C0019202,OMIM:277900,Orphanet:ORPHA905,SNOMED CT:88518009 Wilson disease unknown 13 51935603 TCCTCTGTGTCTGTGGTGCTCTCATCCCTGCAGCTCAAGTGGTGAGTCCCCTCAGGTGGAG 397515610 76722 NM_194248.2(OTOF):c.709C>T (p.Arg237Ter) OTOF Apr 26, 2011 MedGen:C1832828,OMIM:601071 Deafness, autosomal recessive 9 not provided 2 26502301 ACAGCTCTCACCACTAATGTCTCCAACAAGCGGTGAGTGGACGGGAGCCCTGCAACCCCAG 199469635 39479 NM_017415.2(KLHL3):c.1582C>T (p.Arg528Cys) KLHL3 Mar 11, 2012 MedGen:C3469605,OMIM:614495,Orphanet:ORPHA300525;Gene:7830,MedGen:C1449844,OMIM:145260,Orphanet:ORPHA757,SNOMED CT:15689008 Pseudohypoaldosteronism type 2D;Pseudohypoaldosteronism, type 2 germline 5 137628306 AAGCAAGTGGCAGACATGAACATGTGCCGGCGCAACGCAGGTAATGACTGCTCTCTCCATC 1057518571 359967 NM_003482.3(KMT2D):c.7411C>T (p.Arg2471Ter) KMT2D Nov 28, 2016 MedGen:CN517202 not provided germline 12 49040359 GACCCATTTGCCCCATTGCATAAGCCACCCCGACCCCAGCCCCCTGAAGTTGCCTTTAAGG -1 432032 NM_003000.2(SDHB):c.490C>T (p.Gln164Ter) SDHB - MedGen:C1708353,Orphanet:ORPHA29072 Hereditary Paraganglioma-Pheochromocytoma Syndromes germline 1 17027799 GAGCCTTATTTGAAGAAGAAGGATGAATCTCAGGAAGGCAAGCAGCAGTATCTGCAGTCCA 863225210 214362 NM_001165927.1(MKS1):c.1231C>T (p.Pro411Ser) MKS1 Feb 23, 2015 Human Phenotype Ontology:HP:0002335,MedGen:C0431399,Orphanet:ORPHA475,SNOMED CT:253175003,SNOMED CT:716997004 Joubert syndrome unknown 17 58207906 CGTGTGGAAGGCTATGGGGCTGTGGTGCTGCCTGCCACTCCAGGTAACCGCTCGTCTCTGC 886042376 266538 NM_014780.4(CUL7):c.2164C>T (p.Arg722Ter) CUL7 Sep 09, 2015 MedGen:C1848862,OMIM:273750 Three M syndrome 1 germline 6 43048153 ATGGCCTGCCTGCGGTCCCCAAACACTGATCGAGAGGTACCCCTGCCCTGCTCTGGGGAGA 864622138 222459 NM_024675.3(PALB2):c.3271C>T (p.Gln1091Ter) PALB2 Jul 16, 2015 MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006 Familial cancer of breast germline 16 23607943 GAGAGTGAGTCGTTGCGAAGCCCTGTGTTTCAGCTCATTGTGATTAACCCTAAGACGACTC 104894060 17843 NM_018941.3(CLN8):c.610C>T (p.Arg204Cys) CLN8 Aug 14, 2012 MedGen:C1838570,OMIM:600143,Orphanet:ORPHA228354 Ceroid lipofuscinosis neuronal 8 germline;unknown 8 1780316 CAGTGGCTGATGATTCACATGTTTCACTGCCGCATGGTTCTAACCTACCACATGTGGTGGG 72552255 44374 NM_000053.3(ATP7B):c.2930C>T (p.Thr977Met) ATP7B May 25, 2017 MedGen:C0019202,OMIM:277900,Orphanet:ORPHA905,SNOMED CT:88518009 Wilson disease germline;unknown 13 51946414 TCATCCGGTTTGCTTTCCAGACGTCCATCACGGTGCTGTGCATTGCCTGCCCCTGCTCCCT 28933668 25244 NM_000132.3(F8):c.1175C>T (p.Ser392Leu) F8 Apr 01, 1993 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154966522 ACAACTCTCCTTCCTTTATCCAAATTCGCTCAGTTGCCAAGAAGCATCCTAAAACTTGGGT -1 247417 NM_032957.4(RTEL1):c.2077C>T (p.Gln693Ter) RTEL1 May 01, 2015 MedGen:C4225346,OMIM:616373 Pulmonary fibrosis and/or bone marrow failure, telomere-related, 3 germline 20 63689628 AAGATGCAGTTCCTGGATGAGATGAAGGGCCAGGGTGGGGCTGGGGGCCAGGTGAGTTACA 143040492 485854 NM_000044.4(AR):c.2612C>T (p.Ala871Val) AR Sep 05, 2003 MedGen:C0039585,OMIM:300068,SNOMED CT:12313004 Androgen resistance syndrome germline X 67723690 TTTCTCCCTCTTATTGTTCCCTACAGATTGCGAGAGAGCTGCATCAGTTCACTTTTGACCT 587782529 152250 NM_000546.5(TP53):c.1009C>T (p.Arg337Cys) TP53 Sep 29, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0085390,Orphanet:ORPHA524,SNOMED CT:428850001 Hereditary cancer-predisposing syndrome;Li-Fraumeni syndrome germline 17 7670700 CCTCTGTTGCTGCAGATCCGTGGGCGTGAGCGCTTCGAGATGTTCCGAGAGCTGAATGAGG 119469014 18674 NM_000250.1(MPO):c.1495C>T (p.Arg499Cys) MPO Sep 21, 2007 MedGen:C0398595,OMIM:254600,Orphanet:ORPHA2587,SNOMED CT:129644003,SNOMED CT:234433009 Myeloperoxidase deficiency germline 17 58273540 CGCATCGCCAACGTCTTCACCAATGCCTTCCGCTACGGCCACACCCTCATCCAACCCTTCA 863223331 181583 NM_023110.2(FGFR1):c.565C>T (p.Arg189Cys) FGFR1 - MedGen:C1563720,OMIM:147950 Kallmann syndrome 2 unknown 8 38427977 CCTTCCAGTGGGACCCCAAACCCCACACTGCGCTGGTTGAAAAATGGCAAAGAATTCAAAC 121908478 20857 NM_139025.4(ADAMTS13):c.749C>T (p.Ala250Val) ADAMTS13 Oct 01, 2004 MedGen:C1268935,OMIM:274150,Orphanet:ORPHA93583,SNOMED CT:373420004 Upshaw-Schulman syndrome germline 9 133428696 GCGGCTGCGGCCCCAGCGGACACGTGATGGCTTCGGACGGCGCCGCGCCCCGCGCCGGCCT 63750097 96708 NM_000251.2(MSH2):c.862C>T (p.Gln288Ter) MSH2 Jul 31, 2017 MedGen:C0009405,Orphanet:ORPHA443090;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:CN517202 Hereditary nonpolyposis colon cancer;Lynch syndrome;not provided germline 2 47414338 GAACTCTTATCAGATGATTCCAACTTTGGACAGTTTGAACTGACTACTTTTGACTTCAGCC 771939280 481769 NM_012123.3(MTO1):c.1462C>T (p.Arg488Ter) MTO1 May 19, 2017 MedGen:CN517202 not provided germline 6 73482241 CCTGATAATGCTGACAGCCGGCTCACACTGCGAGGTAACTCTTTCCTGAGTCCTGCAATCC 755750961 428320 NM_025074.6(FRAS1):c.2719C>T (p.Gln907Ter) FRAS1 Jul 13, 2016 MedGen:C0265233,OMIM:219000,SNOMED CT:204102004 Cryptophthalmos syndrome germline 4 78364051 GGGCACTATCTTGATGACAATCATGTTTGCCAGCGTAGGTTTTTCCAATGAACCTTCTCTC -1 439840 NM_014806.4(RUSC2):c.2596C>T (p.Arg866Ter) RUSC2 Nov 27, 2017 MedGen:CN651335,OMIM:617773 MENTAL RETARDATION, AUTOSOMAL RECESSIVE 61 germline 9 35555641 CCTCTGGGCTCCTGGCGATCTGGCCTCAGCCGAGCAGAGAGCCTGGCCCGGGGAGGTGGTG 151344629 103801 NM_001243133.1(NLRP3):c.1043C>T (p.Thr348Met) NLRP3 Apr 20, 2017 MedGen:C2316212,Orphanet:ORPHA208650,SNOMED CT:430079001;MedGen:C0268390,OMIM:191900,Orphanet:ORPHA575,SNOMED CT:15123008;MedGen:C0343068,OMIM:120100,Orphanet:ORPHA47045,SNOMED CT:238687000;MedGen:CN517202;MedGen:CN169374 Cryopyrin associated periodic syndrome;Familial amyloid nephropathy with urticaria AND deafness;Familial cold urticaria;not provided;not specified germline 1 247424492 TGCTTCCCGAGGCCTCTCTGCTCATCACCACGAGACCTGTGGCCCTGGAGAAACTGCAGCA 370803545 342838 NM_000528.3(MAN2B1):c.418C>T (p.Arg140Ter) MAN2B1 Sep 12, 2016 MedGen:C0024748,OMIM:248500,Orphanet:ORPHA61,SNOMED CT:124466001 Deficiency of alpha-mannosidase germline;unknown 19 12665370 CAGCAGACAAATGCCACACAGGAAGTCGTGCGAGACCTTGTGCGCCAGGGTGAGCCTACCC 863223478 210054 NM_000093.4(COL5A1):c.2734C>T (p.Arg912Ter) COL5A1 Jan 09, 2015 MedGen:CN517202 not provided germline 9 134795115 ACCCCTGGAAAGCCAGGACCGCGGGGGCAGCGAGGCCCAACGGTAACCACCCTTTCAGCTT 121434547 32656 NM_000070.2(CAPN3):c.956C>T (p.Pro319Leu) CAPN3 Jan 14, 2016 MedGen:C1869123,OMIM:253600,Orphanet:ORPHA267;MedGen:CN517202 Limb-girdle muscular dystrophy, type 2A;not provided germline 15 42392649 CTCTGGTTACTGCTCTACAGACAATCATTCCGGTTCAGTATGAGACAAGAATGGCCTGCGG 386834113 71333 NM_017890.4(VPS13B):c.8515C>T (p.Arg2839Ter) VPS13B Oct 25, 2017 MedGen:C0265223,OMIM:216550,Orphanet:ORPHA193,SNOMED CT:56604005;MedGen:CN517202 Cohen syndrome;not provided germline;unknown 8 99818529 ACTTTAGAACCCAACTCTCAAGTGCAACAACGAATGGTGAGTGCTTTCCCAATCCTAAAAT 80358367 105809 NM_133433.3(NIPBL):c.133C>T (p.Arg45Ter) NIPBL Apr 15, 2015 MedGen:CN029798,OMIM:122470 Cornelia de Lange syndrome 1 germline 5 36955540 ACAACTACAAAGAGCCTTCTCTTTAATGCACGAATAGCAGAAGAGGTGAACTGCCTTTTGG 587777561 150332 NM_031229.3(RBCK1):c.790C>T (p.Gln264Ter) RBCK1 Jan 01, 2013 MedGen:C4014605,OMIM:615895,Orphanet:ORPHA397937 Polyglucosan body myopathy 1 with or without immunodeficiency germline 20 420904 AAGCAGCAGCAGCAGGAGGGGAACTACCTGCAGCACGTCCAGCTGGACCAGAGGAGCCTGG 796051850 16064 NM_020223.3(FAM20C):c.1645C>T (p.Arg549Trp) FAM20C Nov 01, 2007 MedGen:C1850106,OMIM:259775,Orphanet:ORPHA1832 Raine syndrome germline 7 259870 TACCAGCCGCACCTGGAGGCCCTGGACCGGCGGCTCCGCGTCGTGCTAAAGGCCGTCCGGG 121918376 481324 NM_006907.3(PYCR1):c.355C>T (p.Arg119Cys) PYCR1 Jul 28, 2017 MedGen:C2751987,OMIM:612940,Orphanet:ORPHA357064 Autosomal recessive cutis laxa type 2B germline 17 81935111 TCAGCGTTTCGGCCAGCCCCCAGGGTCATCCGCTGCATGACCAACACTCCAGTCGTGGTGC 121918216 16088 NM_015311.2(OBSL1):c.1465C>T (p.Arg489Ter) OBSL1 Jun 01, 2009 MedGen:C2752041,OMIM:612921 Three M syndrome 2 germline 2 219567787 ATGCATGCCCTGGTCCTTCCAGGGGTCACCCGAGAGGATGCTGGCGAGGTCACCTTTAGCC 80357067 69840 NM_007294.3(BRCA1):c.4339C>T (p.Gln1447Ter) BRCA1 Sep 08, 2016 MedGen:C2676676,OMIM:604370;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 1;Hereditary cancer-predisposing syndrome germline 17 43082422 TCTGCCCTTGAGGACCTGCGAAATCCAGAACAAAGCACATCAGAAAAAGGTGTGTATTGTT 761860059 265187 NM_000487.5(ARSA):c.346C>T (p.Arg116Ter) ARSA Jan 19, 2016 MedGen:C0023522,OMIM:250100,Orphanet:ORPHA512,SNOMED CT:396338004 Metachromatic leukodystrophy germline 22 50627285 GAGGTGACCGTGGCCGAAGTCCTGGCTGCCCGAGGCTACCTCACAGGAATGGCCGGCAAGT 397515620 79337 NM_005745.7(BCAP31):c.97C>T (p.Gln33Ter) BCAP31 Sep 05, 2013 Gene:100302680,MedGen:C1845408,OMIM:300475,Orphanet:ORPHA369942 Chromosome Xq28 deletion syndrome germline X 153720968 TCCTGTCCTTTTTGTCTTCTTCACAGATGGCAGAAGATTTTCAAGTCCCGGCTGGTGGAGT 750528020 456043 NM_001010892.2(RSPH4A):c.1351C>T (p.Gln451Ter) RSPH4A Apr 13, 2017 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244 Ciliary dyskinesia germline 6 116628058 TGGGTGAAGTTACCACCAGTTATACCTGCACAAATTGTTATTGCAAGAAAAATCAAGAAAT 121908073 19142 NM_138691.2(TMC1):c.100C>T (p.Arg34Ter) TMC1 Jun 04, 2016 MedGen:C1832978,OMIM:600974;MedGen:CN043648,Orphanet:ORPHA87884 Deafness, autosomal recessive 7;Nonsyndromic hearing loss and deafness germline 9 72694578 GAGGAAGAGGAGGTGGAAGATAAGCTACCTCGAAGAGAGAGCTTGAGACCAAAGAGGAAAC 387907133 40146 NM_016464.4(TMEM138):c.380C>T (p.Ala127Val) TMEM138 Feb 23, 2015 MedGen:C3280906,OMIM:614465 Joubert syndrome 16 germline;unknown 11 61368600 GGCTTCTCTTCTGCTTCCTCCCCACAGCAGCAGTGTTGTACTGCTACTTCTATAAACGGAC 797044854 205263 NM_006624.5(ZMYND11):c.1798C>T (p.Arg600Trp) ZMYND11 Apr 21, 2017 MeSH:D030342,MedGen:C0950123;MedGen:CN517202 Inborn genetic diseases;not provided germline 10 252459 TGGCACGCGGAGCACAAGCGCACCTGCCGCCGGAAAAGATGAAGCTGGCCCTTCCCGGAGT 768050261 29096 NM_007103.3(NDUFV1):c.175C>T (p.Arg59Ter) NDUFV1 Aug 28, 2015 MedGen:C1838979,OMIM:252010;MedGen:CN517202 Mitochondrial complex I deficiency;not provided germline 11 67608571 ATTCTGTCCAGGCTGAAAGGTTCCCTGAGTCGAGGTGACTGGTACAAGACAAAGGAGATCC -1 454270 NM_000038.5(APC):c.832C>T (p.Gln278Ter) APC Jun 08, 2017 MedGen:C2713442,OMIM:175100;MedGen:CN517202 Familial adenomatous polyposis 1;not provided germline;unknown 5 112801381 GAAATCAACATGGCAACTTCTGGTAATGGTCAGGTAAATAAATTATTTTATCATATTTTTT 1047016803 375227 NM_005682.6(ADGRG1):c.367C>T (p.Gln123Ter) ADGRG1 Jan 23, 2017 MedGen:CN517202 not provided germline 16 57651502 AGTGACAAAGCCTCTAGCCTCCTCTGCTTCCAGCACCAGGAGGAGAGCCTGGCTCAGGGCC 776256380 269993 NM_000390.3(CHM):c.715C>T (p.Arg239Ter) CHM Jan 08, 2016 Human Phenotype Ontology:HP:0001139,MedGen:C0008525,OMIM:303100,Orphanet:ORPHA180,SNOMED CT:75241009 Choroideremia germline X 85958965 AATATTTTCTTTGTACAGCTGCTGTATTCTCGAGGATTACTAATTGATCTTCTAATCAAAT 104893915 19128 NM_000112.3(SLC26A2):c.835C>T (p.Arg279Trp) SLC26A2 Apr 05, 2017 MedGen:C1850554,OMIM:256050,Orphanet:ORPHA56304;MedGen:C0220726,OMIM:222600,Orphanet:ORPHA628,SNOMED CT:58561002;MedGen:C1847593,OMIM:226900,Orphanet:ORPHA93307;MedGen:C0029422;MedGen:CN239404;MedGen:CN517202 Atelosteogenesis type 2;Diastrophic dysplasia;Multiple epiphyseal dysplasia 4;Osteochondrodysplasia;SLC26A2-Related Disorders;not provided germline;unknown 5 149980428 GCCAAGTATCTTCTTGGGCTCAACCTTCCTCGGACTAATGGTGTGGGCTCACTCATCACTA 879253852 224618 NM_000255.3(MUT):c.2200C>T (p.Gln734Ter) MUT Sep 08, 2016 MedGen:C1855114,OMIM:251000;MedGen:CN517202 Methylmalonic aciduria due to methylmalonyl-CoA mutase deficiency;not provided germline 6 49431781 CCTGGGACTCGAATTCCAAAGGCTGCCGTTCAGGTGCTTGATGATATTGAGAAGTGTTTGG 78396650 19355 NM_001005741.2(GBA):c.1043C>T (p.Ala348Val) GBA Jul 01, 1990 MedGen:C1961835,OMIM:230800,SNOMED CT:62201009 Gaucher's disease, type 1 germline 1 155236426 CAGAAGCAGCTAAATATGTTCATGGCATTGCTGTACATTGGTACCTGGACTTTCTGGCTCC 137852919 18439 NM_015102.4(NPHP4):c.2377C>T (p.Gln793Ter) NPHP4 Oct 01, 2002 MedGen:C1847013,OMIM:606966 Nephronophthisis 4 germline 1 5887394 GAGCTTGAGGTCGTGGCAACTGAATACGAGCAGGACAACATGGTGGTGAGTGGAGACATGC 397517994 57611 NM_206933.2(USH2A):c.14911C>T (p.Arg4971Ter) USH2A Sep 11, 2012 MedGen:C1848634,OMIM:276901 Usher syndrome, type 2A germline 1 215640615 CTGAAGGAGTACGTGTTAACCGACGGAGGGCGACGCGTGTACAGCGGCTTGGACACCACCC -1 484243 NM_002485.4(NBN):c.574C>T (p.Gln192Ter) NBN Aug 20, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 8 89978230 AAAGCAGTTGAGTCCAAGAAGCAGCCTCCACAAATTGAAAGGTATATTATGTATTTTAAAT 121912745 32803 NM_000342.3(SLC4A1):c.1765C>T (p.Arg589Cys) SLC4A1 Oct 01, 1997 MedGen:C0259810,OMIM:179800 Renal tubular acidosis, distal, autosomal dominant germline 17 44255708 GCCGGTACCTTCTTCTTTGCCATGATGCTGCGCAAGTTCAAGAACAGCTCCTATTTCCCTG 80357208 69682 NM_007294.3(BRCA1):c.3817C>T (p.Gln1273Ter) BRCA1 Jul 29, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome germline 17 43091714 TTGAAGAATAGCTTAAATGACTGCAGTAACCAGGTAATATTGGCAAAGGCATCTCAGGAAC 61749380 15350 NM_000552.4(VWF):c.3854C>T (p.Ser1285Phe) VWF Feb 01, 2003 MedGen:CN517202;MedGen:C1282974,Orphanet:ORPHA166090,SNOMED CT:359729006 not provided;von Willebrand disease type 2M germline 12 6019564 TACTGGACCTGGTCTTCCTGCTGGATGGCTCCTCCAGGCTGTCCGAGGCTGAGTTTGAAGT -1 481972 NM_004523.3(KIF11):c.139C>T (p.Arg47Ter) KIF11 Dec 20, 2017 MedGen:CN517202 not provided germline 10 92606326 GCCCATTCAATAGTAGAATGTGATCCTGTACGAAAAGAAGTTAGTGTACGAACTGGAGGAT 104886478 65618 NM_080871.3(ASB10):c.765C>T (p.Thr255=) ASB10 Mar 15, 2012 MedGen:C1863926,OMIM:603383 Glaucoma 1, open angle, F germline;somatic 7 151181233 CCAGTCCATCACCGATGCCGAGGCCACCACCGCCCGCTGCCTGCAGCTGTGCAGCTTGCTG 910956017 368927 NM_033071.3(SYNE1):c.18469C>T (p.Gln6157Ter) SYNE1 Apr 20, 2015 MedGen:CN517202 not provided germline 6 152269178 CAAGCTCGCACCACATGGACCCAGCAGCGGCAGAGCAGTCTCCAGCAACAAAAAGTAAAGT 121907943 19073 NM_000152.4(GAA):c.2560C>T (p.Arg854Ter) GAA Feb 18, 2017 MedGen:C0017921,OMIM:232300,Orphanet:ORPHA365,SNOMED CT:124462004,SNOMED CT:237967002;MedGen:CN517202 Glycogen storage disease, type II;not provided germline;unknown 17 80118271 GCTGTGGCCCTGACCAAGGGTGGGGAGGCCCGAGGGGAGCTGTTCTGGGACGATGGAGAGA 28933684 25723 NM_000266.3(NDP):c.370C>T (p.Leu124Phe) NDP Oct 01, 1993 MedGen:C1844579,OMIM:305390 Familial exudative vitreoretinopathy, X-linked germline X 43949831 ATGCGACTCACTGCCACCTACCGGTACATCCTCTCCTGTCACTGCGAGGAATGCAATTCCT 104894831 25758 NM_000169.2(GLA):c.118C>T (p.Pro40Ser) GLA Jan 01, 1990 Human Phenotype Ontology:HP:0001071,MedGen:C0002986,OMIM:301500,Orphanet:ORPHA324,SNOMED CT:16652001 Fabry disease germline X 101407786 AGAGCACTGGACAATGGATTGGCAAGGACGCCTACCATGGGCTGGCTGCACTGGGAGCGCT 121908897 21446 NM_001457.3(FLNB):c.6010C>T (p.Arg2004Ter) FLNB Mar 15, 2008 MedGen:C1848934,OMIM:272460,Orphanet:ORPHA3275 Spondylocarpotarsal synostosis syndrome germline 3 58148771 GTGGTCCAGTCGGAGATTGGTGACGCCCGCCGAGCCAAAGTCTATGGCCGCGGCCTGTCAG 886041433 265167 NM_001111125.2(IQSEC2):c.2272C>T (p.Arg758Ter) IQSEC2 Dec 18, 2015 MedGen:CN517202 not provided germline X 53250304 AACAATGATGTGGTCCAGAGGCGGCACTACCGAATCGGCCTCAACCTCTTCAACAAGTGCG 111033180 52334 NM_000260.3(MYO7A):c.1900C>T (p.Arg634Ter) MYO7A Oct 28, 2006 MedGen:C1568247,OMIM:276900,Orphanet:ORPHA231169 Usher syndrome, type 1 germline 11 77172850 ACGCTGGGTGCCTGCCAGCCCTTCTTTGTGCGATGCATCAAGCCCAATGAGTTCAAGAAGC 199469641 39474 NM_017415.2(KLHL3):c.1229C>T (p.Ser410Leu) KLHL3 Mar 11, 2012 MedGen:C3469605,OMIM:614495,Orphanet:ORPHA300525;Gene:7830,MedGen:C1449844,OMIM:145260,Orphanet:ORPHA757,SNOMED CT:15689008 Pseudohypoaldosteronism type 2D;Pseudohypoaldosteronism, type 2 germline 5 137637386 CATGAGTCTCTTGTCTCCCAGGCCTAGCATCGGTGGAAGCCTACAGCTACAAGACCAACGA 587779479 106919 NM_000090.3(COL3A1):c.3070C>T (p.Arg1024Ter) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189006236 GGAAACCCTGGATCAGATGGTCTTCCAGGCCGAGATGGATCTCCTGGTGGCAAGGTATAAT 63750781 32133 NM_000249.3(MLH1):c.350C>T (p.Thr117Met) MLH1 Nov 29, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0009405,Orphanet:ORPHA443090;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:C2936783,OMIM:120435;MedGen:C1333991,OMIM:609310;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Hereditary nonpolyposis colon cancer;Lynch syndrome;Lynch syndrome I;Lynch syndrome II;not provided germline;unknown 3 37004444 TAAGCCATGTGGCTCATGTTACTATTACAACGAAAACAGCTGATGGAAAGTGTGCATACAG 121434599 28784 NM_000316.2(PTH1R):c.395C>T (p.Pro132Leu) PTH1R Sep 01, 1998 MedGen:C1859148,OMIM:215045,Orphanet:ORPHA50945 Chondrodysplasia Blomstrand type germline 3 46897936 CACCAGGTGAGGTGGTGGCTGTGCCCTGTCCGGACTACATTTATGACTTCAATCACAAAGG 587782613 152362 NM_000059.3(BRCA2):c.3412C>T (p.Gln1138Ter) BRCA2 Sep 08, 2016 MedGen:C2675520,OMIM:612555;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 2;Hereditary cancer-predisposing syndrome germline 13 32337767 ACTCAGTTTAGAAAACCAAGCTACATATTGCAGAAGAGTACATTTGAAGTGCCTGAAAACC 760270633 264472 NM_004408.3(DNM1):c.709C>T (p.Arg237Trp) DNM1 Nov 02, 2017 MedGen:C4225357,OMIM:616346;MedGen:CN517202 Epileptic encephalopathy, early infantile, 31;not provided germline 9 128220201 CTGTTCACAGGCTACATTGGAGTGGTGAACCGGAGCCAGAAGGACATTGATGGCAAGAAGG 863225065 196443 NM_003159.2(CDKL5):c.1897C>T (p.Gln633Ter) CDKL5 Feb 13, 2015 MedGen:CN517202 not provided germline X 18604821 AAGGGCTTGGATGGAAGCTTGAGCATAGGGCAAGGGATGGCAGCTAGAGCCAACAGCCTGC -1 481432 NM_001002755.2(NFU1):c.544C>T (p.Arg182Trp) NFU1 Dec 07, 2017 Gene:80767,MedGen:C3276432,OMIM:605711 Multiple mitochondrial dysfunctions syndrome 1 germline 2 69406023 ATGATTAAGGAATTGTTAGATACTAGAATACGGTACGTGCTCCTCTCTCTACCTGAATTCA 121965068 26938 NM_000128.3(F11):c.1289C>T (p.Ala430Val) F11 Dec 01, 1999 MedGen:C0015523,OMIM:612416,Orphanet:ORPHA329,SNOMED CT:49762007 Hereditary factor XI deficiency disease germline 4 186284245 TCATTGGAAACCAGTGGATATTAACAGCCGCTCACTGTTTCTATGGGTCAGTACCACGGCT 750371878 223024 NM_020771.3(HACE1):c.805C>T (p.Arg269Ter) HACE1 Feb 04, 2016 MedGen:C4225215,OMIM:616756,Orphanet:ORPHA464282 Spastic paraplegia and psychomotor retardation with or without seizures germline 6 104796666 ATTATTCAAATGACACAGAATGAAGACCTCCGAGAAAACATGGTATTGTATTTGTGATAGT 780020495 429997 NM_032043.2(BRIP1):c.1741C>T (p.Arg581Ter) BRIP1 Dec 05, 2016 MedGen:CN068837;MedGen:C0027672,SNOMED CT:699346009 Breast cancer, early-onset;Hereditary cancer-predisposing syndrome germline 17 61780893 TTGGTTCTACCAAAAAATAAGAAACGTTCACGACAGAAAACTGCAGTTCATGTGCTAAACT 118203921 15641 NM_000277.2(PAH):c.776C>T (p.Ala259Val) PAH Aug 23, 2016 MedGen:C0031485,OMIM:261600,Orphanet:ORPHA716,SNOMED CT:154735006;MedGen:CN517202 Phenylketonuria;not provided germline;unknown 12 102852881 TTTCCTCTCGGGATTTCTTGGGTGGCCTGGCCTTCCGAGTCTTCCACTGCACACAGTACAT 281865120 47016 NM_014363.5(SACS):c.12160C>T (p.Gln4054Ter) SACS Sep 30, 2016 MedGen:C1849140,OMIM:270550,Orphanet:ORPHA98;MedGen:CN517202 Spastic ataxia Charlevoix-Saguenay type;not provided germline;unknown 13 23331716 GGATTGAAAGTATCCTGCTTTGAAAAGCTTCAAACAACATTAAGAGTTAAAGGTTTTAATC 1057519510 362295 NM_001003694.1(BRPF1):c.1363C>T (p.Arg455Ter) BRPF1 Sep 15, 2017 MedGen:C4310617,OMIM:617333;MedGen:CN517202 Intellectual developmental disorder with dysmorphic facies and ptosis;not provided germline 3 9739762 GACATCCACACGCCTCCAGGTTCAGCACGCCGACTGCCTGCCCTGTCCCACAGCGAGGGTG -1 432446 NM_001085458.1(CTNND1):c.2098C>T (p.Arg700Ter) CTNND1 Sep 20, 2017 MedGen:CN479606,OMIM:617681 BLEPHAROCHEILODONTIC SYNDROME 2 germline 11 57808396 ACCCCTTTCTATTTGCTATTCTAGTATGGTCGATACATCCGCTCTGCTCTGCGTCAAGAGA 267606954 33462 NM_016341.3(PLCE1):c.961C>T (p.Arg321Ter) PLCE1 Jul 01, 2010 MedGen:C1853124,OMIM:610725 Nephrotic syndrome, type 3 germline 10 94032007 GAAGAAGACGCTTTTAAAAGCAAAAAGGAGCGATCCACTTTGTTAGTCAGGAGATTCTGTA 886039553 260000 NM_130799.2(MEN1):c.421C>T (p.Gln141Ter) MEN1 Jun 10, 2016 MedGen:CN517202 not provided germline 11 64809689 CGCTCCTACTTCAAGGATCGGGCCCACATCCAGTCCCTCTTCAGCTTCATCACAGGTTGGA 121434314 16851 NM_152594.2(SPRED1):c.643C>T (p.Gln215Ter) SPRED1 Sep 01, 2007 MedGen:C1969623,OMIM:611431,Orphanet:ORPHA137605 Legius syndrome germline 15 38349482 CAGAGCAGAAGTATGGAATACGTACAGCGGCAAATATCCAAGGAATGTGGAAGCCTAAAGT 121917821 19443 NM_052968.4(APOA5):c.415C>T (p.Gln139Ter) APOA5 Oct 01, 2005 MedGen:C0020481,OMIM:144650,Orphanet:ORPHA70470,SNOMED CT:34349009 Familial type 5 hyperlipoproteinemia germline 11 116790814 CTGAAGCCCTACACGATGGATCTGATGGAGCAGGTGGCCCTGCGCGTGCAGGAGCTGCAGG 55819880 33031 NM_001127701.1(SERPINA1):c.230C>T (p.Ser77Phe) SERPINA1 Jul 15, 2016 MedGen:C0221757,OMIM:613490,Orphanet:ORPHA60,SNOMED CT:30188007;na Alpha-1-antitrypsin deficiency;PI S(IIYAMA) germline;unknown 14 94383008 ACCAGTCCAACAGCACCAATATCTTCTTCTCCCCAGTGAGCATCGCTACAGCCTTTGCAAT 1131691189 421121 NM_177438.2(DICER1):c.3019C>T (p.Gln1007Ter) DICER1 Aug 23, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline 14 95105752 CTTAATCTTTTGACACCTCGACATTTGAATCAGAAGGGGAAAGCGCTTCCTTTAAGCAGTG 104894653 28851 NM_030753.4(WNT3):c.247C>T (p.Gln83Ter) WNT3 Mar 01, 2004 MedGen:C2749279,OMIM:273395 Tetraamelia, autosomal recessive germline 17 46773743 GTGAAGCTGGGCATCCAGGAGTGCCAGCACCAGTTCCGGGGCCGCCGCTGGAACTGCACCA 1060499552 404699 NM_003482.3(KMT2D):c.10810C>T (p.Gln3604Ter) KMT2D Feb 01, 2017 MedGen:CN030661,OMIM:147920 Kabuki syndrome 1 de novo 12 49033895 GAATATCGGAACAAGCAGCAGCAACAACAGCAGCAGCAGCAGCAACAACAGCAACAGCACT 786202421 183797 NM_000059.3(BRCA2):c.4246C>T (p.Gln1416Ter) BRCA2 Sep 08, 2016 MedGen:C2675520,OMIM:612555;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 2;Hereditary cancer-predisposing syndrome germline 13 32338601 AAAGAACAGTTAACTGCTACTAAAACGGAGCAAAATATAAAAGATTTTGAGACTTCTGATA 370031870 213955 NM_021628.2(ALOXE3):c.418C>T (p.Arg140Ter) ALOXE3 - Gene:140560,MedGen:C1847849,OMIM:606545 Autosomal recessive congenital ichthyosis 3 germline 17 8115623 CTGGATCACAGGACACGGGAGCTCCGGGCCCGACAAGAATGCTACCGGTGAGGGTGGCCTA 397514708 70561 NM_001482.2(GATM):c.505C>T (p.Arg169Ter) GATM Jul 01, 2013 MedGen:C2675179,OMIM:612718,Orphanet:ORPHA35704 Arginine:glycine amidinotransferase deficiency germline 15 45368240 GGTCTGACAGGTTTATACAGTGCAATGCCTCGAGACATCCTGATAGTTGTGGGCAATGAGA 80356691 33903 NM_000083.2(CLCN1):c.929C>T (p.Thr310Met) CLCN1 May 03, 2016 MedGen:C0027127,Orphanet:ORPHA206973;MedGen:CN517202 Myotonia congenita;not provided germline 7 143330847 GGAACTACTGGAGAGGATTCTTTGCAGCCACGTTCAGCGCCTTTGTGTTTCGAGTGCTGGC 886041883 264368 NM_012330.3(KAT6B):c.5101C>T (p.Gln1701Ter) KAT6B Feb 16, 2017 MedGen:CN517202 not provided germline 10 75029925 GGAGGCAGCATCTGTGGAAACGGCTCTTCACAGAACAGCTGCTCCTATAGCAACCTCACCT 1060499669 384441 NM_003482.3(KMT2D):c.12661C>T (p.Gln4221Ter) KMT2D Nov 21, 2014 MedGen:CN030661,OMIM:147920 Kabuki syndrome 1 de novo 12 49032044 CTGCGGCACTTAAGTCCTCAGCAGCAGCAGCAGCTACAGGCACTCCTCATGCAGCGGCAGC 754728827 360075 NM_000545.6(HNF1A):c.526C>T (p.Gln176Ter) HNF1A Apr 06, 2016 MedGen:CN517202 not provided germline 12 120989032 TACGTCCGCAAGCAGCGAGAGGTGGCGCAGCGTAAGTAATGACCCTACCCCGCATCTTCCC 34474104 30020 NM_000184.2(HBG2):c.190C>T (p.His64Tyr) HBG2 Jan 01, 2008 MedGen:C3151421,OMIM:613977,Orphanet:ORPHA280615 Cyanosis, transient neonatal germline 11 5254417 GCCATCATGGGCAACCCCAAAGTCAAGGCACATGGCAAGAAGGTGCTGACTTCCTTGGGAG 267607617 77664 NM_170707.3(LMNA):c.1063C>T (p.Gln355Ter) LMNA Jun 16, 2016 MedGen:CN043576;MedGen:CN517202 Charcot-Marie-Tooth disease, type 2;not provided germline 1 156136027 ATGGCCGAGATGCGGGCAAGGATGCAGCAGCAGCTGGACGAGTACCAGGAGCTTCTGGACA 398124092 100739 NM_004006.2(DMD):c.9337C>T (p.Arg3113Ter) DMD Aug 03, 2016 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001;MedGen:CN517202 Duchenne muscular dystrophy;not provided germline X 31223071 TTCTCAGCTTATAGGACTGCCATGAAACTCCGAAGACTGCAGAAGGCCCTTTGCTGTAAGT 121908717 16994 NM_000022.3(ADA):c.301C>T (p.Arg101Trp) ADA Aug 01, 1990 MedGen:C1863236,OMIM:102700,Orphanet:ORPHA277 Severe combined immunodeficiency due to ADA deficiency germline;unknown 20 44626517 GCCAAAGAGGGCGTGGTGTATGTGGAGGTGCGGTACAGTCCGCACCTGCTGGCCAACTCCA 879253717 25039 NM_000425.4(L1CAM):c.2974C>T (p.Gln992Ter) L1CAM Jan 05, 2017 MedGen:C1844006;MedGen:CN517202 Hydrocephalus, X-linked, with congenital idiopathic intestinal pseudoobstruction;not provided germline X 153864893 GATCTCAGCCCCCACCTGCGGTACCGCTTCCAGCTTCAGGCCACCACCAAAGAGGGCCCTG 587777436 139388 NM_001042498.2(SLC35A2):c.638C>T (p.Ser213Phe) SLC35A2 Dec 01, 2013 MedGen:C3806688,OMIM:300896,Orphanet:ORPHA356961 CONGENITAL DISORDER OF GLYCOSYLATION, TYPE IIm germline X 48905271 TGGCAGCCGTCGTGGCCTCCTGTCTCTCCTCCGGCTTCGCAGGTGTCTACTTTGAGAAGAT 863224455 212399 NM_000038.5(APC):c.1072C>T (p.Gln358Ter) APC May 12, 2015 MedGen:C2713442,OMIM:175100 Familial adenomatous polyposis 1 germline 5 112819104 CGACAGTCTGGATGTCTTCCTCTCCTCATCCAGCTTTTACATGGCAATGACAAAGACTCTG 1057521143 379199 NM_000444.5(PHEX):c.565C>T (p.Gln189Ter) PHEX Jan 09, 2017 MedGen:CN517202 not provided germline X 22077604 GTTTGGTCAGAGAGAAAGTTCAGCCTTCTGCAGACACTTGCAACGTTTCGTGGTCAATACA -1 443928 NM_020732.3(ARID1B):c.6382C>T (p.Arg2128Ter) ARID1B Jul 17, 2017 MedGen:CN517202 not provided germline 6 157207523 TACGTTGGGGATCGCAAAAACCCAGTCTGTCGAGAAATGTCCATGGCGCTTTTATCGAACC 794726873 190209 NM_000088.3(COL1A1):c.91C>T (p.Gln31Ter) COL1A1 Apr 21, 2015 MedGen:C0023931,OMIM:166200,SNOMED CT:385482004;MedGen:C0268363,OMIM:166220,Orphanet:ORPHA216820,SNOMED CT:205497004;MedGen:C0268360,OMIM:166210,SNOMED CT:86470003 Osteogenesis imperfecta type I;Osteogenesis imperfecta with normal sclerae, dominant form;Osteogenesis imperfecta, recessive perinatal lethal germline 17 50201423 CACGGCCAAGAGGAAGGCCAAGTCGAGGGCCAAGACGAAGACAGTAAGTCCCAAACTTTTG 74315478 18122 NM_000487.5(ARSA):c.1136C>T (p.Pro379Leu) ARSA Jan 01, 1994 MedGen:C4017095 Arylsulfatase a pseudodeficiency, severe germline 22 50625653 AGAGCCCTCGGCAGTCTCTCTTCTTCTACCCGTCCTACCCAGACGAGGTCCGTGGGGTTTT 763573828 361767 NM_033068.2(ACP4):c.713C>T (p.Ser238Leu) ACP4 Jan 18, 2017 MedGen:C4310630,OMIM:617297 Amelogenesis imperfecta, type IJ germline 19 50793751 CAGATGTCCTGCGGACTCTTGCCCAGATCTCGGCTTTGGATATTGGAGCCCACGTGGGCCC 148891849 221600 NM_001369.2(DNAH5):c.5281C>T (p.Arg1761Ter) DNAH5 Oct 03, 2015 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244 Ciliary dyskinesia germline 5 13841895 TTTTTTTGGTTTCTAACATAGATCTATGATCGAATTCTGTCAATTTCCTCTCAAGAGGGTG 1064793986 411318 NM_004006.2(DMD):c.3487C>T (p.Gln1163Ter) DMD Aug 20, 2015 MedGen:CN517202 not provided germline X 32454778 AAGGGAGGTTTGGAGAAAACTGTAAGCCTCCAGAAAGATCTATCAGAGATGCACGAATGGA 121909639 31335 NM_023110.2(FGFR1):c.1825C>T (p.Arg609Ter) FGFR1 Apr 28, 2017 na;MedGen:C1563720,OMIM:147950;MedGen:CN517202 HYPOGONADOTROPIC HYPOGONADISM 2 WITH ANOSMIA, SUSCEPTIBILITY TO;Kallmann syndrome 2;not provided germline 8 38415899 GACCTGGTGTCCTGCGCCTACCAGGTGGCCCGAGGCATGGAGTATCTGGCCTCCAAGAAGG 121964925 27130 NM_199186.2(BPGM):c.268C>T (p.Arg90Cys) BPGM Nov 15, 1992 MedGen:C1291620,OMIM:222800,SNOMED CT:124678007 Deficiency of bisphosphoglycerate mutase germline 7 134661775 CCTGTGGAAAGCTCCTGGCGTCTAAATGAGCGTCACTATGGGGCCTTGATCGGTCTCAACA 104894402 32050 NM_004004.5(GJB2):c.223C>T (p.Arg75Trp) GJB2 Dec 22, 2016 MedGen:C2675750,OMIM:601544;MedGen:CN043648,Orphanet:ORPHA87884 Deafness, autosomal dominant 3a;Nonsyndromic hearing loss and deafness germline 13 20189359 TACGATCACTACTTCCCCATCTCCCACATCCGGCTATGGGCCCTGCAGCTGATCTTCGTGT 387906637 38687 NM_000833.4(GRIN2A):c.652C>T (p.Gln218Ter) GRIN2A Nov 01, 2010 MedGen:C1832814,OMIM:245570 Epilepsy, focal, with speech disorder and with or without mental retardation germline 16 9938314 ACTTCCTTTGAGGATGCAAAGACACAAGTCCAGCTGAAGAAGATCCACTCTTCTGTCATCT 587784151 168224 NM_022455.4(NSD1):c.5566C>T (p.Gln1856Ter) NSD1 Feb 08, 2013 MedGen:CN035106,OMIM:117550 Sotos syndrome 1 germline 5 177273728 GAGGAATTAAAGGCCCAAAAAGAGCTAAGACAGCTGCAGGAAGACCGAAAGAATGACAAGA 151340631 26821 NM_000052.6(ATP7A):c.1910C>T (p.Ser637Leu) ATP7A Feb 08, 2013 MedGen:C0268353,OMIM:304150,Orphanet:ORPHA198,SNOMED CT:59399004;MedGen:C0022716,OMIM:309400,Orphanet:ORPHA565,SNOMED CT:59178007 Cutis laxa, X-linked;Menkes kinky-hair syndrome germline X 78011216 TTGAAGCTTCTTTGGTCAAGAAGGATCGGTCAGCAAGTCACTTAGATCATAAACGAGAAAT 150966634 408448 NM_007103.3(NDUFV1):c.1156C>T (p.Arg386Cys) NDUFV1 Jul 25, 2016 MedGen:CN517202 not provided germline 11 67611972 CACGAGAGCTGTGGCCAGTGTACCCCATGCCGTGAGGGTGAGCATCGGGCAGGTTGGGGGC 387906770 39062 NM_002052.4(GATA4):c.127C>T (p.Arg43Trp) GATA4 Apr 01, 2012 MedGen:C3280777,OMIM:614429 Ventricular septal defect 1 germline 8 11708439 GCGTCCTCGCCAGTCTACGTGCCCACACCGCGGGTGCCCTCCTCCGTGCTGGGCCTGTCCT 886038978 258663 NM_001613.2(ACTA2):c.940C>T (p.Arg314Ter) ACTA2 Mar 04, 2015 MedGen:CN118826,Orphanet:ORPHA91387 Thoracic aortic aneurysm and aortic dissection germline 10 88938111 GGCACCACTATGTACCCTGGCATTGCCGACCGAATGCAGAAGGAGATCACGGCCCTAGCAC 797044912 205288 NM_001271.3(CHD2):c.5035C>T (p.Arg1679Ter) CHD2 Oct 21, 2013 MeSH:D030342,MedGen:C0950123 Inborn genetic diseases germline 15 93020140 TGGTACAAGGACCACCATTATGGGGACCGGCGACATATGGATGCCCACCGTTCCGGAAGCT 267606919 21912 NM_004646.3(NPHS1):c.3478C>T (p.Arg1160Ter) NPHS1 Jun 25, 2017 MedGen:C0403399,OMIM:256300,Orphanet:ORPHA839,SNOMED CT:197601003 Finnish congenital nephrotic syndrome germline;unknown 19 35831056 CCCCCGACGCAGGAGGAGGTGTCTTATTCCCGAGGTGAGTTAGGACCATGTCAGGATTCCC 768514713 429287 NM_000920.3(PC):c.1357C>T (p.Arg453Ter) PC Aug 08, 2016 MedGen:C0034341,OMIM:266150,SNOMED CT:87694001 Pyruvate carboxylase deficiency germline 11 66863785 ATGAGCAGGGCCCTTGCGGAGTTCCGCGTCCGAGGTGTGAAGGTGAGAGGCTGCAGCCCCC 119490108 20676 NM_012203.1(GRHPR):c.295C>T (p.Arg99Ter) GRHPR Nov 02, 2017 MedGen:C0020501,Orphanet:ORPHA416,SNOMED CT:17901006;MedGen:C0268165,OMIM:260000,Orphanet:ORPHA93599,SNOMED CT:40951006;MedGen:CN517202 Primary hyperoxaluria;Primary hyperoxaluria, type II;not provided germline 9 37426545 ACCACCAGATGTCTGATTCGTAGTGGGATCCGAGTTGGCTACACCCCAGATGTCCTGACAG 879253956 244884 NM_001376.4(DYNC1H1):c.9092C>T (p.Thr3031Met) DYNC1H1 Oct 17, 2016 MedGen:CN517202 not provided germline 14 102027662 TTGAAGGAGACGAGTATGCCACCTTGATGACGCAGTGCAAAGAGGGGGCACAGAAGGAAGG -1 426896 NM_001171.5(ABCC6):c.3119C>T (p.Pro1040Leu) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16165810 GATCTCCCATCAGCTTCTTTGAGCGGACACCCATTGGTCACCTGCTAAACCGCTTCTCCAA 794727792 195318 NM_003165.3(STXBP1):c.364C>T (p.Arg122Ter) STXBP1 Feb 24, 2017 MedGen:C2677326,OMIM:612164;MedGen:CN517202 Early infantile epileptic encephalopathy 4;not provided germline 9 127661140 GATGCCCTGTTTAATGAACTGGTAAAATCCCGAGCAGCCAAAGTCATCAAAACTCTGACGG 121434506 23749 NM_021922.2(FANCE):c.421C>T (p.Arg141Ter) FANCE Nov 01, 2000 MedGen:C3160739,OMIM:600901 Fanconi anemia, complementation group E germline 6 35455919 GCCTGGCTCCGTGCCCTGGGGGAATTGCTGCGAAGGGATTTGGGGGTGGGGACCTCCATGG 763718818 259987 NM_207122.1(EXT2):c.937C>T (p.Gln313Ter) EXT2 Jun 02, 2017 MedGen:C1851413,OMIM:133701;MedGen:CN517202 Multiple exostoses type 2;not provided germline 11 44124982 CACCAGGTCTTCGATTACCCACAGGTGCTACAGGTGAGTGTCATTCATTACCTCTCGCAAA 587783809 169971 NM_000252.2(MTM1):c.208C>T (p.Leu70Phe) MTM1 Feb 08, 2013 MedGen:C0410203,OMIM:310400,Orphanet:ORPHA596,SNOMED CT:46804001 Severe X-linked myotubular myopathy germline X 150598663 AAGGGAAGAGTTTACATCACAAATTATCGTCTTTATTTAAGAAGTTTGGAAACGGTAAGTA 773159585 213789 NM_014874.3(MFN2):c.707C>T (p.Thr236Met) MFN2 Jul 13, 2016 MedGen:CN043576;MedGen:C1836485,OMIM:609260,Orphanet:ORPHA99947;Human Phenotype Ontology:HP:0008944,MedGen:C1836451;Human Phenotype Ontology:HP:0002460,MedGen:C1864696;Human Phenotype Ontology:HP:0003477,MedGen:C1263857 Charcot-Marie-Tooth disease, type 2;Charcot-Marie-Tooth disease, type 2A2A;Distal lower limb amyotrophy;Distal muscle weakness;Peripheral axonal neuropathy germline;unknown 1 11998877 TGGCCAACTCAGAGTCCACCCTGATGCAGACGGTAACTCCTCCTCTGCCTTCTCCCAAGCT 398123812 100284 NM_003919.2(SGCE):c.709C>T (p.Arg237Ter) SGCE Feb 24, 2017 MedGen:C1834570,OMIM:159900,Orphanet:ORPHA36899,SNOMED CT:439732004;MedGen:CN517202 Myoclonic dystonia;not provided germline 7 94603406 GGTGCAGATGTCCCGTTTTCTTCTTGTTTACGAGAAGTTGAAAATCCACAGAATCAATTGA 397514553 48246 NM_002524.4(NRAS):c.101C>T (p.Pro34Leu) NRAS Feb 25, 2016 Human Phenotype Ontology:HP:0010816,MedGen:C0334082,OMIM:162900,Orphanet:ORPHA35125,SNOMED CT:25201003;MedGen:C0041409,OMIM:163950 Epidermal nevus;Noonan syndrome 1 germline;somatic 1 114716060 TCCAGAACCACTTTGTAGATGAATATGATCCCACCATAGAGGTGAGGCCCAGTGGTAGCCC 201322234 38690 NM_001244710.1(GFPT1):c.331C>T (p.Arg111Cys) GFPT1 Feb 11, 2011 MedGen:C3552335,OMIM:610542 Congenital myasthenic syndrome 12 germline 2 69363563 GAACCCAGTCCTGTCAATAGCCACCCCCAGCGCTCTGATAAAAATAATGGTATGGAAAGAT 1131691072 420801 NM_001042492.2(NF1):c.4195C>T (p.Gln1399Ter) NF1 Dec 21, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN169374 Hereditary cancer-predisposing syndrome;not specified germline 17 31258365 TGTTTTTAGGTGGTTAGCCAGCGTTTCCCTCAGAACAGCATCGGTGCAGTAGGAAGTGCCA -1 482146 NM_001288653.1(CLTC):c.2062C>T (p.Gln688Ter) CLTC Dec 12, 2017 MedGen:CN517202 not provided germline 17 59666899 AACATCCGTCAGAATCTGCAGATTTGTGTTCAGGTGGCTTCTAAATATCATGAACAACTGT 80356750 15884 NM_012463.3(ATP6V0A2):c.187C>T (p.Arg63Ter) ATP6V0A2 Aug 30, 2013 MedGen:C0268355,OMIM:219200,Orphanet:ORPHA357058,SNOMED CT:73856006 Cutis laxa with osteodystrophy germline 12 123718692 GGTGAGGTGAAGAGGTGTGAAGAGCTAGAGCGAATATTGGGTAAGTTTATTTTCTGATTTA 121964879 27264 NM_001692.3(ATP6V1B1):c.91C>T (p.Arg31Ter) ATP6V1B1 Jan 01, 1999 MedGen:C4016429 Renal tubular acidosis, distal, with progressive deafness germline 2 70936045 GCAGCCCGAGAACACATGCAGGCGGTCACCCGAAACTACATCACCCACCCCCGTGTCAGTG 796053224 202751 NM_014191.3(SCN8A):c.4949C>T (p.Ala1650Val) SCN8A Oct 18, 2013 MedGen:CN517202 not provided germline 12 51806435 TGCTCTTTGCCTTAATGATGTCCTTGCCTGCCCTGTTCAACATCGGCCTTCTGCTCTTCCT 80356945 69207 NM_007294.3(BRCA1):c.2338C>T (p.Gln780Ter) BRCA1 Jul 30, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline;unknown 17 43093193 TCATTGGTACCTGGTACTGATTATGGCACTCAGGAAAGTATCTCGTTACTGGAAGTTAGCA 137853315 26806 NM_001110556.1(FLNA):c.383C>T (p.Ala128Val) FLNA Mar 01, 2006 MedGen:C1848213,OMIM:300049,OMIM:300537,SNOMED CT:448227009 Periventricular nodular heterotopia 1 germline X 154368081 TGGCCACTCTTCTACTCACAGACAGCAAGGCCATCGTGGACGGGAACCTGAAGCTGATCCT 878853438 239565 NM_000038.5(APC):c.3391C>T (p.Gln1131Ter) APC Nov 22, 2016 MedGen:C2713442,OMIM:175100;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Familial adenomatous polyposis 1;Hereditary cancer-predisposing syndrome;not provided germline 5 112838985 ATTAATCAAAATGTAAGCCAGTCTTTGTGTCAAGAAGATGACTATGAAGATGATAAGCCTA 267606624 15066 NM_015600.4(ABHD12):c.1054C>T (p.Arg352Ter) ABHD12 Sep 10, 2010 MedGen:C2675204,OMIM:612674,Orphanet:ORPHA171848 Polyneuropathy, hearing loss, ataxia, retinitis pigmentosa, and cataract germline 20 25302322 CCCCAGCTCTATAGCATCGCCGCACCAGCTCGAAGCTTCCGAGATTTCAAAGTTCAGTTTG 121965020 26948 NM_000203.4(IDUA):c.208C>T (p.Gln70Ter) IDUA Aug 04, 2016 Human Phenotype Ontology:HP:0000943,MedGen:C0086795,OMIM:607014,Orphanet:ORPHA93473;MedGen:C0023786,Orphanet:ORPHA579;MedGen:C0086431,OMIM:607015,Orphanet:ORPHA93476,SNOMED CT:26745009;MedGen:C0026708,OMIM:607016,Orphanet:ORPHA93474,SNOMED CT:73123008 Hurler syndrome;Mucopolysaccharidosis type I;Mucopolysaccharidosis, MPS-I-H/S;Mucopolysaccharidosis, MPS-I-S germline;unknown 4 987858 CAGGCTGACCAGTACGTCCTCAGCTGGGACCAGCAGCTCAACCTCGCCTATGTGGGCGCCG 1057519304 361821 NM_001128608.1(MAPKBP1):c.4393C>T (p.Arg1465Ter) MAPKBP1 May 22, 2017 MedGen:CN781300,OMIM:617271 Nephronophthisis 20 germline 15 41825284 CAGCTCCTCAGAGACACCTTCTCTTCAGTGCGACAGGAGCTGGAAGCTGTGGCTGGGGCAG 587777462 143133 NM_001128849.1(SMARCA4):c.643C>T (p.Gln215Ter) SMARCA4 May 01, 2014 MedGen:C2750074,OMIM:613325 Rhabdoid tumor predisposition syndrome 2 unknown 19 10986476 CAGGGCAAGCGGCCGATGCCCGGGATGCAGCAGCAGATGCCAACGCTACCTCCACCCTCGG 80356893 68976 NM_007294.3(BRCA1):c.1612C>T (p.Gln538Ter) BRCA1 Nov 01, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202;MedGen:CN169374 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided;not specified germline 17 43093919 ACTCCTGAAATGATAAATCAGGGAACTAACCAAACGGAGCAGAATGGTCAAGTGATGAATA -1 481725 NM_005859.4(PURA):c.205C>T (p.Gln69Ter) PURA Aug 04, 2017 MedGen:CN517202 not provided germline 5 140114386 CAGGAGCTGGCCTCCAAGCGGGTGGACATCCAGAACAAGCGCTTCTACCTGGACGTGAAGC 886040873 262113 NM_015247.2(CYLD):c.1363C>T (p.Gln455Ter) CYLD Sep 23, 2016 MedGen:C1851526,OMIM:132700 Cylindromatosis, familial germline 16 50779889 GTAATGGAAGAGCTAAACACTGCACCCGTCCAAGAGAGTCCACCCTTGGCCATGCCTCCTG 387907368 65574 NM_207111.3(RNF216):c.2251C>T (p.Arg751Cys) RNF216 May 23, 2013 MedGen:C1859305,OMIM:212840,Orphanet:ORPHA1173 Gordon Holmes syndrome germline 7 5641285 AAATCTGAAGGCTGCAACCGCATGTCTTGCCGCTGTGGTGCCCAGATGTGCTACCTCTGTC 370270828 171269 NM_001519.3(BRF1):c.667C>T (p.Arg223Trp) BRF1 Jan 05, 2015 MedGen:C4015495,OMIM:616202,Orphanet:ORPHA444072;MedGen:CN221667 Cerebellofaciodental syndrome;cerebellar-facial-dental syndrome germline 14 105241292 AGGATGAAGCGGGACTGGATGCACACAGGCCGGCGCCCCTCGGGCCTCTGCGGAGCAGGTA 104893688 16936 NM_000060.4(BTD):c.1595C>T (p.Thr532Met) BTD Sep 15, 2016 MedGen:C0220754,OMIM:253260,Orphanet:ORPHA79241,SNOMED CT:8808004;MedGen:CN517202 Biotinidase deficiency;not provided germline;unknown 3 15645451 GGAAAAGTAGGCTGTCCTCTGGGCTGGTGACGGCGGCTCTCTATGGGCGCTTGTATGAGAG 119481077 19916 NM_000197.1(HSD17B3):c.238C>T (p.Arg80Trp) HSD17B3 May 04, 2017 MedGen:CN239160;MedGen:C0033804;MedGen:C0268296,OMIM:264300,Orphanet:ORPHA752,SNOMED CT:50658006;MedGen:CN517202 17-Beta-Hydroxysteroid Dehydrogenase III Deficiency;Pseudohermaphroditism;Testosterone 17-beta-dehydrogenase deficiency;not provided germline 9 96254907 AAACGTGGACTCAATGTTGTCCTTATTAGCCGGACGCTGGAAAAACTAGAGGCCATTGCCA 80359850 16779 NM_001017420.2(ESCO2):c.604C>T (p.Gln202Ter) ESCO2 Oct 02, 2008 MedGen:C0392475,OMIM:268300,OMIM:269000,SNOMED CT:48718006 Roberts-SC phocomelia syndrome germline 8 27776912 CCTCGGGTTCTGAGCCAAAAAATAAAACCACAAGTTACACTCCAGGGTGGAGCAGCATTTT 863224150 212009 NM_000284.3(PDHA1):c.506C>T (p.Ala169Val) PDHA1 Apr 17, 2015 MedGen:CN517202 not provided germline X 19353169 ACTTCTACGGGGGCAATGGCATCGTGGGAGCGCAGGTAGTCAAGGACGAGGATTGTGTGCT 863223537 209956 NM_000118.3(ENG):c.562C>T (p.Gln188Ter) ENG Nov 02, 2016 MedGen:CN517202 not provided germline 9 127825822 TCACTGTCCTTCTGCATGCTGGAAGCCAGCCAGGACATGGGCCGCACGCTCGAGTGGCGGC 137853263 25900 NM_000276.3(OCRL):c.952C>T (p.Arg318Cys) OCRL Sep 25, 2014 MedGen:C1845167,OMIM:300555,Orphanet:ORPHA93623;MedGen:C0028860,OMIM:309000,Orphanet:ORPHA534,SNOMED CT:79385002 Dent disease 2;Lowe syndrome germline X 129562396 ACTCCCCGGAACTCATAGGTTCAACTGGTGCGCCTTGTTGGGATGATGCTTCTTATATTTG 121917886 24122 NM_022788.4(P2RY12):c.793C>T (p.Arg265Trp) P2RY12 Jun 14, 2017 MedGen:C1853278,OMIM:609821,Orphanet:ORPHA36355 Platelet-type bleeding disorder 8 germline 3 151338053 GCCCGAATTCCTTACACCCTGAGCCAAACCCGGGATGTCTTTGACTGCACTGCTGAAAATA 376161880 264567 NM_024079.4(ALG8):c.1090C>T (p.Arg364Ter) ALG8 Feb 21, 2018 MedGen:CN818986,OMIM:617874;MedGen:CN517202 POLYCYSTIC LIVER DISEASE 3 WITH OR WITHOUT KIDNEY CYSTS;not provided germline 11 78106895 TTTAAACCCCAAGGGCCCAGAGGCTTTCTCCGATGTCTAACTCTTTGTGCCTTGAGCTCCT 878853162 237527 NM_178014.3(TUBB):c.662C>T (p.Thr221Ile) TUBB Apr 14, 2016 MedGen:C4014283,OMIM:615771 Cortical dysplasia, complex, with other brain malformations 6 de novo 6 30723724 GCTTCCGCACTCTGAAGCTGACCACACCAACCTACGGGGATCTGAACCACCTTGTCTCAGC 1057520694 367936 NM_001615.3(ACTG2):c.584C>T (p.Thr195Ile) ACTG2 May 26, 2015 MedGen:CN517202 not provided germline 2 73913617 ACCTCACGGACTACCTCATGAAGATCCTCACAGAGAGAGGCTATTCCTTTGTGACCACAGG 281864780 49818 NM_212472.2(PRKAR1A):c.82C>T (p.Gln28Ter) PRKAR1A Sep 20, 2012 MedGen:C2607929,OMIM:160980 Carney complex, type 1 not provided 17 68515481 TGTGAGCTCTACGTCCAGAAGCATAACATTCAAGCGCTGCTCAAAGATTCTATTGTGCAGT 119476046 19385 NM_015915.4(ATL1):c.715C>T (p.Arg239Cys) ATL1 Jun 22, 2017 MedGen:C2931355,OMIM:182600,Orphanet:ORPHA100984;MedGen:CN517202 Spastic paraplegia 3;not provided germline 14 50613343 GCCGATGGTGGTGCCAAATTCTTGGAAAAACGCCTCAAGGTTTGTTAGATATTTAGGTGCA 281865419 27425 NM_000594.3(TNF):c.322C>T (p.Arg108Trp) TNF Jan 21, 1993 MedGen:C4016415 TNF receptor binding, altered germline 6 31577157 GCTGAGGGGCAGCTCCAGTGGCTGAACCGCCGGGCCAATGCCCTCCTGGCCAATGGCGTGG 56361140 32801 NM_000342.3(SLC4A1):c.448C>T (p.Arg150Ter) SLC4A1 Aug 01, 1996 MedGen:C2675212,OMIM:612653 Spherocytosis type 4 germline 17 44260441 ATCTTTGAAGACCAGATCCGGCCTCAGGACCGAGAGGAGCTGCTCCGGGCCCTGCTGCTTA 398123018 51189 NM_032957.4(RTEL1):c.2941C>T (p.Arg981Trp) RTEL1 Jun 16, 2016 MedGen:C0265965,Orphanet:ORPHA1775,SNOMED CT:74911008;MedGen:C3554656,OMIM:615190 Dyskeratosis congenita;Dyskeratosis congenita, autosomal recessive, 5 germline 20 63693160 CCTTCCTCTACAGGCTTCTACCAGTTTGTGCGGCCCCACCATAAGCAGCAGTTTGAGGAGG 121918005 28706 NM_000478.5(ALPL):c.98C>T (p.Ala33Val) ALPL Oct 15, 1992 Human Phenotype Ontology:HP:0003239,MedGen:C0268412,OMIM:241500,Orphanet:ORPHA247651,SNOMED CT:55236002 Infantile hypophosphatasia germline 1 21560662 AGAAAGACCCCAAGTACTGGCGAGACCAAGCGCAAGAGACACTGAAATATGCCCTGGAGCT -1 433265 NM_000267.3(NF1):c.7411C>T (p.Gln2471Ter) NF1 Mar 14, 2017 MedGen:CN169374 not specified germline 17 31352273 TTTTCATCTTTCAGGACACTAAAGGAGACTCAGCCATGGTCCTCTCCCAAAGGTTCTGAAG 121912585 17475 NM_001173464.1(KIF21A):c.2860C>T (p.Arg954Trp) KIF21A Aug 17, 2016 MedGen:C1851102,OMIM:135700;MedGen:C2751105;MedGen:CN517202 Fibrosis of extraocular muscles, congenital, 1;Fibrosis of extraocular muscles, congenital, 3b;not provided germline 12 39332405 TTAAAATCCAACCTGCTTTCTCAATAGCAACGGGAGGAACTCACAAAAAGACGAGAGAAAC -1 472548 NM_000465.3(BARD1):c.1345C>T (p.Gln449Ter) BARD1 Mar 30, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 2 214769282 GGCGACATACCTTCTGTTGAATACCTTTTACAAAATGGAAGTGATCCAAATGTTAAAGACC 267606870 362868 NM_002168.3(IDH2):c.418C>T (p.Arg140Trp) IDH2 Feb 16, 2018 Human Phenotype Ontology:HP:0004808,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:ORPHA519,SNOMED CT:17788007;MeSH:D015179,MedGen:CN236642;Human Phenotype Ontology:HP:0006775,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:ORPHA29073,SNOMED CT:109989006,SNOMED CT:55921005;MeSH:D009190,MedGen:C0026986,OMIM:614286;MeSH:C535575,MedGen:C1168401,OMIM:275355,Orphanet:ORPHA67037 Acute myeloid leukemia;Colorectal Neoplasms;Multiple myeloma;Myelodysplastic syndrome;Squamous cell carcinoma of the head and neck somatic 15 90088703 AAGATGTGGAAAAGTCCCAATGGAACTATCCGGAACATCCTGGGGGGGACTGTCTTCCGGG 137854435 15809 NM_198488.3(FAM83H):c.973C>T (p.Arg325Ter) FAM83H Jan 01, 2012 MedGen:C0399376,OMIM:130900,Orphanet:ORPHA100032,SNOMED CT:109471001 Amelogenesis imperfecta, hypocalcification type germline 8 143728488 GGGGCGCCAACCCCCTTCTCCTTCCCTAAACGAGCGCACCTCCTGTTCCCGCCACCCCGGG -1 455113 NM_001369.2(DNAH5):c.6037C>T (p.Arg2013Ter) DNAH5 Aug 14, 2017 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244 Ciliary dyskinesia germline 5 13830621 GTTTTCAATTGTTCAGACCAGATGGATTTCCGAGGACTTGGACGGATTTTTAAGGGTATGG 690016553 171825 NM_005211.3(CSF1R):c.2701C>T (p.Pro901Ser) CSF1R Dec 18, 2014 Gene:8156,MedGen:C1857300,OMIM:221820 Hereditary diffuse leukoencephalopathy with spheroids germline 5 150054384 GCCTGCTGGGCCTTGGAGCCCACCCACAGACCCACCTTCCAGCAGATCTGCTCCTTCCTTC 201633414 359376 NM_000388.3(CASR):c.73C>T (p.Arg25Ter) CASR Jul 11, 2017 MedGen:C0342345,OMIM:601198;MedGen:C1809471,OMIM:145980,Orphanet:ORPHA93372,SNOMED CT:190868007;MedGen:CN517202 Hypocalcemia, autosomal dominant 1;Hypocalciuric hypercalcemia, familial, type 1;not provided germline 3 122254262 TGGCACACCTCTGCCTACGGGCCAGACCAGCGAGCCCAAAAGAAGGGGGACATTATCCTTG 387907103 40049 NM_017813.4(IMPAD1):c.559C>T (p.Arg187Ter) IMPAD1 Nov 30, 2017 MedGen:C3279757,OMIM:614078,Orphanet:ORPHA280586;MedGen:CN517202 Chondrodysplasia with joint dislocations, GPAPP type;not provided germline 8 56978137 TGTTTTGTTTTTTTTCTCATAGAGGATCTTCGAAAGTACGTCACTACTATGGTGTGTGTGG 754545360 216029 NM_172250.2(MMAA):c.397C>T (p.Gln133Ter) MMAA Jan 07, 2016 MedGen:C1855109,OMIM:251100,Orphanet:ORPHA79310 Methylmalonic aciduria cblA type germline 4 145639536 CTTCAGAAAGTATTACTTTACCACAGAGAACAAGAACAATCAAATAAAGGAAAACCACTAG 111033697 45909 NM_000155.3(GALT):c.428C>T (p.Ser143Leu) GALT Dec 04, 2012 MedGen:C0268151,OMIM:230400,Orphanet:ORPHA79239,SNOMED CT:124354006 Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase not provided 9 34647882 CCTGGTCGGATGTAACGCTGCCACTCATGTCGGTCCCTGAGATCCGGGCTGTTGTTGATGC 386134156 51290 NM_000096.3(CP):c.2701C>T (p.Arg901Ter) CP Apr 18, 2013 MedGen:C0878682,OMIM:604290,Orphanet:ORPHA48818,SNOMED CT:124224004 Deficiency of ferroxidase not provided 3 149178592 AGTGGATTAATTGGCCCCCTGATTGTTTGTCGAAGACCTTACTTGAAAGTATTCAATCCCA 373208120 357287 NM_174878.2(CLRN1):c.619C>T (p.Arg207Ter) CLRN1 Nov 02, 2016 MedGen:C1568248,OMIM:276902,Orphanet:ORPHA231183 Usher syndrome, type 3A unknown 3 150928016 TTTGTTCATTTTCTGAATGGGCTCCTAATACGACTTGCTGGATTTCAGTTCCCTTTTGCAA -1 434161 NM_000384.2(APOB):c.13126C>T (p.Gln4376Ter) APOB - MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 2 21002296 GAGCTTCAGGAAGCTTCTCAAGAGTTACAGCAGATCCATCAATACATTATGGCCCTTCGTG 137852897 17803 NM_024312.4(GNPTAB):c.3565C>T (p.Arg1189Ter) GNPTAB Jun 02, 2014 MedGen:C2673377,OMIM:252500,Orphanet:ORPHA576;MedGen:C0033788,OMIM:252600,Orphanet:ORPHA423461,SNOMED CT:65764006 I cell disease;Pseudo-Hurler polydystrophy germline 12 101753409 CCTTCCCAATTTGAACTGCCAAGAGAGTATCGAAACCGTTTCCTTCATATGCATGAGCTGC -1 458625 NM_018972.2(GDAP1):c.703C>T (p.Gln235Ter) GDAP1 Feb 27, 2017 MedGen:C1859198,OMIM:214400,Orphanet:ORPHA99948 Charcot-Marie-Tooth disease, type 4A germline 8 74363993 CTATGTCCCTTTCTCTAATTAGAAGAGGGCCAGCAACCTTGGCTCTGCGGTGAATCCTTCA 121912822 32553 NM_020549.4(CHAT):c.1258C>T (p.Arg420Cys) CHAT Feb 13, 2001 MedGen:C0393929,OMIM:254210,SNOMED CT:230670003 Familial infantile myasthenia germline 10 49646651 GGCGGAGGCTACAGCAAGAACGGGGCCAATCGCTGGTACGACAAGTCCCTGCAGGTAAGCC 80357296 69580 NM_007294.3(BRCA1):c.3544C>T (p.Gln1182Ter) BRCA1 Sep 08, 2016 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome germline 17 43091987 GAAAGTTCTGCTGTTTTTAGCAAAAGCGTCCAGAAAGGAGAGCTTAGCAGGAGTCCTAGCC 80358578 66117 NM_000059.3(BRCA2):c.3319C>T (p.Gln1107Ter) BRCA2 Sep 08, 2016 MedGen:C2675520,OMIM:612555;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 2;Hereditary cancer-predisposing syndrome germline 13 32337674 TTTAATTCAAACCATAATTTAACACCTAGCCAAAAGGCAGAAATTACAGAACTTTCTACTA 879255247 178824 NM_004793.3(LONP1):c.2026C>T (p.Pro676Ser) LONP1 Jan 08, 2015 MedGen:C1838180,OMIM:600373,Orphanet:ORPHA1458 CODAS syndrome germline 19 5694889 TGACGGTTGCCCTTGCAGCGCTACCTGGTGCCCCAGGCTCGCGCCCTGTGTGGCTTGGATG 796052495 201864 NM_000806.5(GABRA1):c.881C>T (p.Thr294Ile) GABRA1 Oct 09, 2017 MedGen:CN517202 not provided germline 5 161895690 TTACAGGAGTAACAACTGTGCTCACCATGACAACATTGAGCATCAGTGCCAGAAACTCCCT 76296470 15620 NM_000277.2(PAH):c.331C>T (p.Arg111Ter) PAH May 03, 2017 MedGen:C0031485,OMIM:261600,Orphanet:ORPHA716,SNOMED CT:154735006;MedGen:CN517202 Phenylketonuria;not provided germline;unknown 12 102894756 GACATTGGTGCCACTGTCCATGAGCTTTCACGAGATAAGAAGAAAGACACAGGTAAGAATT -1 485828 NM_000044.4(AR):c.214C>T (p.Gln72Ter) AR Nov 07, 2012 MedGen:C0039585,OMIM:300068,SNOMED CT:12313004 Androgen resistance syndrome germline X 67545360 CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAGAGA 766199971 487165 NM_000414.3(HSD17B4):c.1516C>T (p.Arg506Cys) HSD17B4 Feb 16, 2017 MedGen:C0342870,OMIM:261515,Orphanet:ORPHA300,SNOMED CT:238068007 Bifunctional peroxisomal enzyme deficiency germline 5 119525228 TTTATGCTTTCTCCACAGGCTGCTTTGTACCGCCTCAGTGGAGACTGGAATCCCTTACACA 143947056 260197 NM_000199.3(SGSH):c.877C>T (p.Pro293Ser) SGSH Nov 12, 2016 MedGen:C0086647,OMIM:252900,Orphanet:ORPHA79269,SNOMED CT:41572006;MedGen:CN517202 Mucopolysaccharidosis, MPS-III-A;not provided germline;unknown 17 80212143 ACCAACCTGTACTGGCCGGGCACTGCTGAACCCTTACTGGTGTCATCCCCGGAGCACCCAA 121912528 29436 NM_000233.3(LHCGR):c.1118C>T (p.Ala373Val) LHCGR Feb 01, 1998 MedGen:C0342549,OMIM:176410,Orphanet:ORPHA3000,SNOMED CT:237818003 Gonadotropin-independent familial sexual precocity germline 2 48688679 GGGTCCTGATTTGGCTGATTAATATTCTAGCCATCATGGGAAACATGACTGTTCTTTTTGT 137853145 20752 NM_004750.4(CRLF1):c.829C>T (p.Arg277Ter) CRLF1 Dec 15, 2008 MedGen:C1848947,OMIM:272430 Cold-induced sweating syndrome 1 germline 19 18596918 CTCTTTCAAGCCAAATACCAGATCCGCTACCGAGTGGAGGACAGTGTGGACTGGAAGGTGA -1 443069 NM_001256850.1(TTN):c.90085C>T (p.Arg30029Ter) TTN Sep 08, 2017 MedGen:CN517202 not provided germline 2 178546323 GAAAAAGTCTCTTTGCAGTATACTGGCAAACGAGCAACTGCTGTGATCAAGTTCTGTGACA -1 484096 NM_002485.4(NBN):c.565C>T (p.Gln189Ter) NBN Sep 25, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 8 89978239 GAATTCCTGAAAGCAGTTGAGTCCAAGAAGCAGCCTCCACAAATTGAAAGGTATATTATGT 114863111 259720 NM_173076.2(ABCA12):c.3889C>T (p.Arg1297Ter) ABCA12 Jun 08, 2015 MedGen:CN517202 not provided germline 2 214987734 TTTCCAATTCTTCCTTCCTATTGGAAGGAGCGATTTGGGTGTGCAGAGGTGAAGCCTGAGA 587777739 166016 NM_001024613.3(FEZF1):c.832C>T (p.His278Tyr) FEZF1 Sep 04, 2014 MedGen:C4017302 Hypogonadotropic hypogonadism 22 with anosmia germline 7 122303281 GTCTTTAATGCGCACTATAACTTAACCCGTCACATGCCAGTGCACACAGGAGCCAGACCCT 74315313 17113 NM_020435.3(GJC2):c.718C>T (p.Arg240Ter) GJC2 Apr 01, 2007 MedGen:C1837355,OMIM:608804,Orphanet:ORPHA280270 Leukodystrophy, hypomyelinating, 2 germline 1 228158476 GGCCAGTACCTGCTGTACGGCTTCGAGGTGCGACCGTTCTTTCCCTGCAGCCGCCAGCCCT 137852367 25168 NM_000132.3(F8):c.566C>T (p.Ser189Leu) F8 Dec 01, 1989 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154992971 CTCATGTGGACCTGGTAAAAGACTTGAATTCAGGCCTCATTGGAGCCCTACTAGTATGTAG 128626252 26302 NM_004006.2(DMD):c.6790C>T (p.Gln2264Ter) DMD Jan 01, 1994 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Duchenne muscular dystrophy germline X 31929718 CAGTTACTGGTGGAAGAGTTGCCCCTGCGCCAGGGAATTCTCAAACAATTAAATGAAACTG 566755911 216926 NM_001286209.1(GAS8):c.994C>T (p.Gln332Ter) GAS8 Oct 01, 2015 MedGen:C4225230,OMIM:616726 Ciliary dyskinesia, primary, 33 germline 16 90040357 CGGAAGTTCACCGCAGCCATCCAGGAGGTGCAGCAGAAGACAGGGTTCAAGAACCTCGTGC 878853685 242068 NM_000138.4(FBN1):c.5038C>T (p.Gln1680Ter) FBN1 Jan 16, 2016 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006 Marfan syndrome germline 15 48463926 TACACCTGTATCTGTCCTCCAGACTACATGCAAGTGAATGGGGGAAATAATTGCATGGGTA 122458142 26589 NM_001159702.2(FHL1):c.367C>T (p.His123Tyr) FHL1 Feb 01, 2009 MedGen:C2678027,OMIM:300717 Myopathy, reducing body, X-linked, early-onset, severe germline X 136207827 CAAAACGTGGAGTACAAGGGGACCGTCTGGCACAAAGACTGCTTCACCTGTAGTAACTGCA 61761068 57813 NM_001142633.2(PIK3R5):c.1885C>T (p.Pro629Ser) PIK3R5 Feb 01, 2012 MedGen:C3554690,OMIM:615217 Ataxia-oculomotor apraxia 3 germline 17 8887116 GAGCGCAATGTACTGGGCCTCATGCACCTGCCCCCTGAAGTCCTGTGCCAGGTAAGTGGCC 121434492 23071 NM_005535.2(IL12RB1):c.94C>T (p.Gln32Ter) IL12RB1 Mar 02, 2016 MedGen:C4013949,OMIM:614891,Orphanet:ORPHA319552 Immunodeficiency 30 germline 19 18083462 GCTGCCTGCAGAACCAGTGAGTGCTGTTTTCAGGACCCGCCATATCCGGATGCAGACTCAG 763672163 432256 NM_023936.1(MRPS34):c.94C>T (p.Gln32Ter) MRPS34 Sep 15, 2017 MedGen:CN469327,OMIM:617664 COMBINED OXIDATIVE PHOSPHORYLATION DEFICIENCY 32 germline 16 1773026 CGGGAGCAACTGAACAGGCCGCGCGACTCCCAGCTCTACGCGGTGGACTACGAGACCTTGA 118204060 16566 NM_000237.2(LPL):c.701C>T (p.Pro234Leu) LPL May 01, 1993 MedGen:C0023817,OMIM:238600,Orphanet:ORPHA309015,SNOMED CT:238086005,SNOMED CT:275598004 Hyperlipoproteinemia, type I germline 8 19954279 AGAAACCAGTTGGGCATGTTGACATTTACCCGAATGGAGGTACTTTTCAGCCAGGATGTAA 1057517966 359493 NM_000248.3(MITF):c.763C>T (p.Arg255Ter) MITF Oct 31, 2016 MedGen:CN517202 not provided de novo;germline 3 69959325 ACCATCTTAAAAGCATCCGTGGACTATATCCGAAAGTTGCAACGAGAACAGCAACGCGCAA 878854909 243667 NM_007194.3(CHEK2):c.1072C>T (p.Gln358Ter) CHEK2 Mar 29, 2016 MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C0027672,SNOMED CT:699346009 Familial cancer of breast;Hereditary cancer-predisposing syndrome germline 22 28696924 TTAAAGCCAGAGAATGTTTTACTGTCATCTCAAGAAGAGGACTGTCTTATAAAGGTAAGAA 104893799 27853 NM_003106.3(SOX2):c.529C>T (p.Gln177Ter) SOX2 Sep 01, 2006 MedGen:C1859773,OMIM:206900,Orphanet:ORPHA77298 Microphthalmia syndromic 3 germline 3 181712889 AGCAACGGCAGCTACAGCATGATGCAGGACCAGCTGGGCTACCCGCAGCACCCGGGCCTCA 397514459 187805 NM_001165963.1(SCN1A):c.2584C>T (p.Arg862Ter) SCN1A Dec 20, 2014 MedGen:C1858673,OMIM:604403;MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002 Generalized epilepsy with febrile seizures plus, type 2;Severe myoclonic epilepsy in infancy de novo;germline 2 166039428 GTGGAAGGATTATCTGTTCTCCGTTCATTTCGATTGGTAAAAAAAAAAAAAAAAAGCACCA 199422244 47550 NM_001363.4(DKC1):c.200C>T (p.Thr67Ile) DKC1 May 10, 2012 MedGen:C1148551,OMIM:305000 Dyskeratosis congenita X-linked not provided X 154765935 AGAATTTTGATAAGCTGAATGTAAGGACAACACACTATACACCTCTTGCATGTGGTTCAAA 74315366 27817 NM_003000.2(SDHB):c.268C>T (p.Arg90Ter) SDHB Jul 14, 2017 MedGen:C1708353,Orphanet:ORPHA29072;MedGen:C1708353,Orphanet:ORPHA29072;MedGen:C0027672,SNOMED CT:699346009;MedGen:C1861848,OMIM:115310;Human Phenotype Ontology:HP:0002666,MedGen:C0031511,OMIM:171300;MedGen:CN517202 Hereditary Paraganglioma-Pheochromocytoma Syndromes;Hereditary Paraganglioma-Pheochromocytoma Syndromes;Hereditary cancer-predisposing syndrome;Paragangliomas 4;Pheochromocytoma;not provided germline;unknown 1 17033078 AAGAATGAAGTTGACTCTACTTTGACCTTCCGAAGATCATGCAGAGAAGGTGAGCATTTCA 1057516430 358391 NM_000135.2(FANCA):c.295C>T (p.Gln99Ter) FANCA Aug 16, 2016 MedGen:C3469521,OMIM:227650 Fanconi anemia, complementation group A unknown 16 89811060 GTTTTGTTTTGTGTTTAAGGCTCTGCTTTGCAGGATCAAGCCTCAAGGCTGGGGGTTCCCG 587777261 131949 NM_001111125.2(IQSEC2):c.2563C>T (p.Arg855Ter) IQSEC2 Feb 01, 2014 Gene:170530,MedGen:C2931498,OMIM:300551,OMIM:309530 Mental retardation, X-linked 1 germline X 53248133 CGGGTTCAGGGTGAGGCCCAGAAAGTGGAGCGACTCATCGAAGCCTTCAGGTGTGCCTACC 75166491 108429 NM_000277.2(PAH):c.472C>T (p.Arg158Trp) PAH May 04, 2017 MedGen:C0031485,OMIM:261600,Orphanet:ORPHA716,SNOMED CT:154735006;MedGen:CN517202 Phenylketonuria;not provided germline;unknown 12 102866633 GGTTTTAAAGATCCTGTGTACCGTGCAAGACGGAAGCAGTTTGCTGACATTGCCTACAACT 587777486 143184 NM_016122.2(CEP83):c.121C>T (p.Arg41Ter) CEP83 Jun 05, 2014 MedGen:C3890591,OMIM:615862 Nephronophthisis 18 germline 12 94412370 TTCCAGAAAATGTTAATTGATGAAAGGTTACGATGTGAGCATCATAAAGCTAATTATCAGA 63751294 31053 NM_002087.3(GRN):c.1477C>T (p.Arg493Ter) GRN Jun 21, 2017 MedGen:C1843792,OMIM:607485;MedGen:CN517202 Frontotemporal dementia, ubiquitin-positive;not provided germline 17 44352404 CCGGCTGGCTACACCTGCAACGTGAAGGCTCGATCCTGCGAGAAGGAAGTGGTCTCTGCCC 1057520549 369555 NM_014141.5(CNTNAP2):c.2050C>T (p.Gln684Ter) CNTNAP2 Mar 18, 2015 MedGen:CN517202 not provided germline 7 147639258 GCCATCACTGACAGTGCCGAGTACTGCGAGCAGTATGTCTCCTATTTCTGCAAGATGTCAA -1 481755 NM_020732.3(ARID1B):c.5776C>T (p.Arg1926Ter) ARID1B May 04, 2017 MedGen:CN517202 not provided germline 6 157206917 ATCAAGCTGCTGGAGGACGAGCCCAGGAGCCGAGACGAGACTCCTCTGTGTACCATCGCGC 786205161 187942 NM_173354.4(SIK1):c.1840C>T (p.Gln614Ter) SIK1 Apr 02, 2015 MedGen:C4225360,OMIM:616341 Epileptic encephalopathy, early infantile, 30 germline 21 43417679 AAAATCAAGGGGCTGGCTCGCCAGGTGTGCCAGGCCCCCGCCAGCCGGGCCAGCAGGGGCG 121965023 26954 NM_000203.4(IDUA):c.928C>T (p.Gln310Ter) IDUA Aug 01, 1993 Human Phenotype Ontology:HP:0000943,MedGen:C0086795,OMIM:607014,Orphanet:ORPHA93473 Hurler syndrome germline 4 1002117 GCGGACCCGCTGGTGGGCTGGTCCCTGCCACAGCCGTGGAGGGCGGACGTGACCTACGCGG 567961453 431673 NM_001142564.1(CNGA1):c.1885C>T (p.Arg629Ter) CNGA1 Jan 01, 2015 Human Phenotype Ontology:HP:0000547,MeSH:D012174,MedGen:C0035334,OMIM:268000,Orphanet:ORPHA791,SNOMED CT:28835009 Retinitis pigmentosa unknown 4 47936816 CTTAACATTAAAGGGAGCAAAGCTGGCAATCGAAGAACGGCCAATATTAAAAGTATTGGCT 180177248 200524 NM_000030.2(AGXT):c.614C>T (p.Ser205Leu) AGXT Nov 27, 2014 MedGen:C0268164,OMIM:259900,Orphanet:ORPHA93598,SNOMED CT:65520001 Primary hyperoxaluria, type I germline 2 240873996 ACCCATCTACAGGCATCGACATCCTGTACTCGGGCTCCCAGAAGGCCCTGAACGCCCCTCC 118203916 15443 NM_000353.2(TAT):c.1249C>T (p.Arg417Ter) TAT Oct 01, 1992 MedGen:C0268487,OMIM:276600,Orphanet:ORPHA28378 Tyrosinemia type 2 germline 16 71568260 TTGCAGTGCTTTGAGTACCCGAATTTCATCCGAGTGGTCATCACAGTCCCCGAGGTGATGA 786205045 187565 NM_001110792.1(MECP2):c.48C>T (p.Gly16=) MECP2 Jul 19, 2017 MedGen:C0035372,OMIM:312750,Orphanet:ORPHA778,SNOMED CT:68618008;MedGen:CN517202 Rett syndrome;not provided de novo;germline X 154097618 CGCCGCGCCGAGCGGAGGAGGAGGAGGAGGCGAGGAGGAGAGACTGTGAGTGGGACCGCCG 864309667 215678 NM_020680.3(SCYL1):c.1636C>T (p.Gln546Ter) SCYL1 Dec 03, 2015 MedGen:C1843891,OMIM:607454,Orphanet:ORPHA98773 Spinocerebellar ataxia 21 germline 11 65536319 AAATTGGAGTCTGTGTCGGAGGACCCGACCCAGCTGGAGGAAGTGGGTGAGTGGCTTACAC 761917087 214825 NM_177550.4(SLC13A5):c.425C>T (p.Thr142Met) SLC13A5 Nov 01, 2015 MedGen:C4014621,OMIM:615905 Epileptic encephalopathy, early infantile, 25 germline 17 6704000 CAGCCCTCCTGTCCATGTGGATCAGTAACACGGCAACCACGGCCATGATGGTGCCCATCGT -1 443225 NM_000182.4(HADHA):c.1195C>T (p.Arg399Ter) HADHA Aug 29, 2017 MedGen:CN517202 not provided germline 2 26204087 CTTAAAGATGCCACCCTCACTGCGCTAGACCGAGGACAGCAACAAGTGTTCAAAGGGTAAG 104893898 21928 NM_002495.3(NDUFS4):c.316C>T (p.Arg106Ter) NDUFS4 Nov 15, 2017 MedGen:C1838951;MedGen:C1838979,OMIM:252010 Leigh syndrome due to mitochondrial complex I deficiency;Mitochondrial complex I deficiency germline;inherited 5 53646371 AAATGGAAGATGGAGTTTGATACCAGAGAGCGATGGGAAAATCCTTTGATGGGTTGGGCAT 864309526 215085 NM_006329.3(FBLN5):c.1117C>T (p.Arg373Cys) FBLN5 Jul 01, 2013 MedGen:C1837187,OMIM:608895 Age-related macular degeneration 3 germline 14 91877555 GCTGACATCTTCCAAATGCAAGCCACGACCCGCTACCCTGGGGCCTATTACATTTTCCAGA 121965051 15207 NM_000274.3(OAT):c.722C>T (p.Pro241Leu) OAT Dec 26, 2016 MedGen:C0018425;Human Phenotype Ontology:HP:0012026,MedGen:C0599035,OMIM:258870,SNOMED CT:276426004 Gyrate atrophy;Ornithine aminotransferase deficiency germline 10 124403847 CAATTCAGGGTGAAGCAGGCGTTGTTGTTCCGGATCCAGGTTACCTAATGGGAGTGCGAGA 201725369 194563 NM_213599.2(ANO5):c.172C>T (p.Arg58Trp) ANO5 Aug 30, 2017 MedGen:C1969785,OMIM:611307,Orphanet:ORPHA206549;MedGen:C2750076,OMIM:613319,Orphanet:ORPHA399096;MedGen:CN517202 Limb-girdle muscular dystrophy, type 2L;Miyoshi muscular dystrophy 3;not provided germline;inherited 11 22218279 GCAAAGCGATTCAATTTGTTCCTGAGGCGGCGGCTTATGGTAAAACCAGTGCTGAATGATG 80338697 18215 NM_138477.3(CDAN1):c.3124C>T (p.Arg1042Trp) CDAN1 Sep 01, 2011 MedGen:C0271933,OMIM:224120,Orphanet:ORPHA98869,SNOMED CT:59548005 Congenital dyserythropoietic anemia, type I germline 15 42726390 CAGGACGTGCTCTCCTTGGCCGTGGGGCCACGGGACCCTGACGAGGGAGTCTCCCCAGAGC 138119149 39897 NM_020745.3(AARS2):c.1774C>T (p.Arg592Trp) AARS2 Sep 08, 2017 MedGen:C3279793,OMIM:614096,Orphanet:ORPHA319504;MedGen:CN517202 Combined oxidative phosphorylation deficiency 8;not provided germline;maternal 6 44304512 CTCCCTCAGGACGTGCTGTTCCCAGTAGCCCGGGCCCAGGTCTGTGGAGGTTTCATCCTGC 72551314 76781 NM_000784.3(CYP27A1):c.475C>T (p.Gln159Ter) CYP27A1 Aug 03, 2016 MedGen:C0238052,OMIM:213700,Orphanet:ORPHA909,SNOMED CT:63246000;MedGen:CN517202 Cholestanol storage disease;not provided germline 2 218812250 AGGGAAGGACACCACTGGTACCAGCTGCGCCAGGCTCTGAACCAGCGGTTGCTGAAGCCAG 193922362 45079 NM_000215.3(JAK3):c.1767C>T (p.Gly589=) JAK3 Aug 23, 2016 Human Phenotype Ontology:HP:0004430,MeSH:D016511,MedGen:C0085110,Orphanet:ORPHA183660,SNOMED CT:31323000;MedGen:CN517202 Severe combined immunodeficiency disease;not provided germline 19 17837148 GTCGTACCGGCATCTCGTGCTGCTCCACGGCGTGTGCATGGCTGGAGACAGTGAGAGCCCC 1064793772 409570 NM_024675.3(PALB2):c.163C>T (p.Gln55Ter) PALB2 Jun 18, 2015 MedGen:CN517202 not provided germline 16 23637898 AAGCATTCTATTAAGAAAACAGTAGAAGAACAAGATTGTTTGTCTCAGCAGGATCTCTCAC 377543079 448951 NM_002977.3(SCN9A):c.640C>T (p.Arg214Ter) SCN9A Jul 17, 2017 MedGen:C2751777,OMIM:613863;MedGen:C2752089,OMIM:201300 Generalized epilepsy with febrile seizures plus, type 7;Hereditary sensory and autonomic neuropathy type IIA germline 2 166304286 TTTGTAAACCTAGGCAATGTTTCAGCTCTTCGAACTTTCAGAGTATTGAGAGCTTTGAAAA 387907153 40213 NM_001099274.1(TINF2):c.805C>T (p.Gln269Ter) TINF2 May 01, 2012 MedGen:C3151445,OMIM:613990 Dyskeratosis congenita, autosomal dominant, 3 germline 14 24240675 AATCTGGCCCCTCTAGGCCGACGAAGAGTTCAGTCCCAATGGGCCTCCACTAGGGGAGGCC 527236156 152925 NM_001194958.2(KCNJ18):c.1195C>T (p.Arg399Ter) KCNJ18 Jul 31, 2014 MedGen:C0268446,OMIM:188580,Orphanet:ORPHA79102,SNOMED CT:30967002 Thyrotoxic periodic paralysis germline 17 21703981 GAGGATGAGGCGGACGGAGACCAGGACGGCCGAAGCCGGGATGGCCTCAGCCCCCAGGCCA 121909110 22538 NM_004452.3(ESRRB):c.329C>T (p.Ala110Val) ESRRB Jan 01, 2008 MedGen:C1837857,OMIM:608565 Deafness, autosomal recessive 35 germline 14 76439682 AGCGCCTGTGCCTCGTGTGCGGGGACATTGCCTCTGGCTACCACTACGGCGTGGCCTCCTG 281865076 33956 NM_000195.4(HPS1):c.391C>T (p.Arg131Ter) HPS1 Oct 11, 2012 MedGen:C2931875,OMIM:203300 Hermansky-Pudlak syndrome 1 not provided 10 98435279 GGGCTGGTGACTGTGGACGGTCATCTTATCCGAAAGGAGTGAGTCTTCAAAGCTGGTCCCC 387906759 39039 NM_007315.3(STAT1):c.800C>T (p.Ala267Val) STAT1 Jun 01, 2013 MedGen:C3279990,OMIM:614162,Orphanet:ORPHA391487 Immunodeficiency 31C germline 2 190995205 TCTTGTGTCTTCCCAGGTTCACTATAGTTGCGGAGAGTCTGCAGCAAGTTCGGCAGCAGCT 764623179 188207 NM_000183.2(HADHB):c.1175C>T (p.Ala392Val) HADHB May 01, 2014 MedGen:C0342786,OMIM:609015,SNOMED CT:237999008 Mitochondrial trifunctional protein deficiency germline 2 26284908 TCCAGGGTCAGATTTTGGCAAATTTTAAAGCCATGGATTCTGATTGGTTTGCAGAAAACTA 62645952 152795 NM_000350.2(ABCA4):c.763C>T (p.Arg255Cys) ABCA4 - MedGen:C1858806,OMIM:604116 Cone-rod dystrophy 3 not provided 1 94098799 TATGCCAACGTGGACTTCTTCAAGCTCTTCCGTGTGGTAAGGGAGGGGTTTGGCTGCTCGC 751356206 191605 NM_147127.4(EVC2):c.2263C>T (p.Gln755Ter) EVC2 Jun 23, 2014 MedGen:C0013903,OMIM:225500,Orphanet:ORPHA289,SNOMED CT:62501005 Chondroectodermal dysplasia germline 4 5622775 GAAAAGGCCACCGACGAGCTGCGGCGCCTGCAGAACTCAGCCATGACCCAGGAGCTGCTCA 781171206 198795 NM_001256850.1(TTN):c.91774C>T (p.Arg30592Ter) TTN Nov 13, 2014 MedGen:CN517202 not provided germline 2 178543276 TGGGAAAAACCACTCTACGATGGTGGTAGCCGACTCACTGGATATGTTCTCGAGGCCTGCA 794729301 198841 NM_001256850.1(TTN):c.87394C>T (p.Arg29132Ter) TTN Mar 13, 2017 MedGen:C1837342,OMIM:608807,Orphanet:ORPHA140922;MedGen:CN517202 Limb-girdle muscular dystrophy, type 2J;not provided germline 2 178549309 AGCACAAGATGGGTAAAAGTGATCAGCAAACGACCAATCTCTGAAACAAGATTCAAAGTCA 267607016 22357 NM_004560.3(ROR2):c.1324C>T (p.Arg442Ter) ROR2 Nov 01, 2009 MedGen:C3151610 Robinow syndrome, autosomal recessive, with brachy-syn-polydactyly germline 9 91726603 CAGAAGGCATCTGCGTCCACACCGCAGCGGCGACAGCTGATGGCCTCGCCCAGCCAAGACA 200844390 27001 NM_014425.4(INVS):c.2695C>T (p.Arg899Ter) INVS Jun 14, 2016 MedGen:C1865872,OMIM:602088,SNOMED CT:444558002;MedGen:C0687120,Orphanet:ORPHA655,SNOMED CT:204958008 Infantile nephronophthisis;Nephronophthisis germline 9 100292952 GTGAATATTGACCTTCTCCCCGTAGAGCTCCGACTGCAGATAATTCAGAGAGAACGAAGGA 786203950 184531 NM_001042492.2(NF1):c.910C>T (p.Arg304Ter) NF1 Sep 18, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003;MedGen:CN517202;MedGen:CN169374 Hereditary cancer-predisposing syndrome;Neurofibromatosis, type 1;not provided;not specified germline 17 31200443 ATTCTGTAGAAGTTATTTCTGGACAGTCTACGAAAAGCTCTTGCTGGCCATGGAGGAAGTA 769976586 422046 NM_000126.3(ETFA):c.667C>T (p.Arg223Ter) ETFA Sep 17, 2015 MedGen:CN517202 not provided germline 15 76283823 ATTTTTTTTTTTCATCTTTTTAAATGAGGTCGAGGCTTGAAGAGTGGAGAGAACTTTAAGT 587777091 102942 NM_052844.3(WDR34):c.1022C>T (p.Ala341Val) WDR34 Feb 10, 2014 MedGen:C3810200,OMIM:615633 Short-rib thoracic dysplasia 11 with or without polydactyly germline 9 128634881 GGGAGACCGAGGTGGGCGCCACGGCAGTGGCCTTCTCCAGCTTTGACCCTAGGCTGTTCAT 794727281 192419 NM_006177.3(NRL):c.151C>T (p.Pro51Ser) NRL Mar 27, 2015 MedGen:C1834329,OMIM:613750 Retinitis pigmentosa 27 germline 14 24082698 TCCACACCTTACAGCTCAGTGCCTCCTTCACCCACCTTCAGTGAACCAGGCATGGTGGGGG 121434534 32854 NM_031226.2(CYP19A1):c.1303C>T (p.Arg435Cys) CYP19A1 Dec 15, 1993 MedGen:C0878680,OMIM:613546,Orphanet:ORPHA91 Aromatase deficiency germline 15 51211017 AGGTACTTTCAGCCATTTGGCTTTGGGCCCCGTGGCTGTGCAGGAAAGTACATCGCCATGG 876659614 236166 NM_007294.3(BRCA1):c.442C>T (p.Gln148Ter) BRCA1 Jun 04, 2015 MedGen:C2676676,OMIM:604370;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 1;Hereditary cancer-predisposing syndrome germline 17 43099880 TGCTTGACTGTTCTTTACCATACTGTTTAGCAGGAAACCAGTCTCAGTGTCCAACTCTCTA -1 434162 NM_000384.2(APOB):c.13114C>T (p.Gln4372Ter) APOB - MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 2 21002308 TTTATTCAAAACGAGCTTCAGGAAGCTTCTCAAGAGTTACAGCAGATCCATCAATACATTA 267608472 153552 NM_003159.2(CDKL5):c.400C>T (p.Arg134Ter) CDKL5 Mar 13, 2014 MedGen:C1839333,OMIM:300672;MedGen:CN517202 Early infantile epileptic encephalopathy 2;not provided germline;unknown X 18579965 CACTGGTGCCATAAGAATGATATTGTCCATCGAGGTGAGTATGAGATTTTTAAAATGGAAA 61753038 105320 NM_000350.2(ABCA4):c.6118C>T (p.Arg2040Ter) ABCA4 Aug 16, 2016 MeSH:C535804,MedGen:C1855465,OMIM:248200;MedGen:CN517202 Stargardt disease 1;not provided germline 1 94005470 CGAGAACATCTTTACCTTTATGCCCGGCTTCGAGGTGTACCAGCAGAAGAAATCGAAAAGG 45517412 58633 NM_000548.4(TSC2):c.5227C>T (p.Arg1743Trp) TSC2 Aug 08, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1860707,OMIM:613254;MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Tuberous sclerosis 2;Tuberous sclerosis syndrome;not provided germline 16 2088293 ACCGATATCTACCCCTCCAAGTGGATTGCCCGGCTCCGCCACATCAAGCGGCTCCGCCAGC 121908367 20189 NM_020632.2(ATP6V0A4):c.2257C>T (p.Gln753Ter) ATP6V0A4 Sep 01, 2000 MedGen:C1864498,OMIM:602722,Orphanet:ORPHA402041 Renal tubular acidosis, distal, autosomal recessive germline 7 138715764 CGGCTCTGGGCCCTCAGCCTGGCTCATGCACGTGAGTGAGCAGCCCATCGGGGGGACAGTC 119466002 18055 NM_176824.2(BBS7):c.632C>T (p.Thr211Ile) BBS7 Jul 24, 2017 MedGen:C0752166,OMIM:209900,Orphanet:ORPHA110,SNOMED CT:5619004;MedGen:CN237793 Bardet-Biedl syndrome;Bardet-Biedl syndrome 1/7, digenic germline 4 121854790 GTGACTCTGGAGAAGACCTTTTGTTTGGGACATCAGACGGAAAACTTGCGCTTATACAGAT 111033348 19869 NM_000441.1(SLC26A4):c.578C>T (p.Thr193Ile) SLC26A4 Feb 19, 2016 Human Phenotype Ontology:HP:0011387,MedGen:C1863752,OMIM:600791;Human Phenotype Ontology:HP:0011387,MedGen:C1863752,OMIM:600791;MedGen:C0271829,OMIM:274600,Orphanet:ORPHA705,SNOMED CT:70348004;MedGen:C0271829,OMIM:274600,Orphanet:ORPHA705,SNOMED CT:70348004 Enlarged vestibular aqueduct;Enlarged vestibular aqueduct;Pendred's syndrome;Pendred's syndrome germline 7 107674326 CAGCTAGAGTCCTGATTGCCAGTGCCCTGACTCTGCTGGTTGGAATTATACAGGTAATGAA 869312892 226683 NM_139276.2(STAT3):c.2147C>T (p.Thr716Met) STAT3 Jun 14, 2016 MedGen:C4014795,OMIM:615952,Orphanet:ORPHA438159;MedGen:CN517202 Autoimmune disease, multisystem, infantile-onset, 1;not provided germline;inherited;unknown 17 42316899 CCCTCCTGCTGCCCCCCATTTCCTACAGAACGACCTGCAGCAATACCATTGACCTGCCGAT 1064793762 409506 NM_001009944.2(PKD1):c.6913C>T (p.Gln2305Ter) PKD1 Jul 24, 2015 MedGen:CN517202 not provided germline 16 2108254 AGTTTCCACTGGGCCTGTGTGGCTTCGACACAGGTCAGTGCGTGGCAGGGCCGTCCTCCAT 781469274 395365 NM_001369.2(DNAH5):c.8314C>T (p.Arg2772Ter) DNAH5 Aug 09, 2017 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244 Ciliary dyskinesia germline 5 13792128 TCTGTGACAAAATTGGTGCCTCTGACACGCCGACTATGGCAGATGACCAAGATTAAAATGC 121912672 33380 NM_005199.4(CHRNG):c.136C>T (p.Arg46Ter) CHRNG Aug 01, 2006 MedGen:C0265261,OMIM:265000,Orphanet:ORPHA294060 Multiple pterygium syndrome Escobar type germline 2 232540072 AACTACGACCCCAACCTGCGGCCCGCGGAACGAGACTCGGATGTGGTCAATGTCAGCCTGA 121918222 16262 NM_006363.5(SEC23B):c.40C>T (p.Arg14Trp) SEC23B Oct 10, 2016 MedGen:C1306589,OMIM:224100,Orphanet:ORPHA98873,SNOMED CT:68870007;MedGen:CN517202 Congenital dyserythropoietic anemia, type II;not provided germline 20 18510875 TACCTGGAGTTCATCCAGCAGAATGAAGAACGGGATGGTGTGCGTTTTAGTTGGAACGTGT 61755771 28218 NM_000322.4(PRPH2):c.136C>T (p.Arg46Ter) PRPH2 Jan 01, 1995 MedGen:C1842475,OMIM:608133;MedGen:CN517202 Retinitis pigmentosa 7;not provided germline 6 42722199 AGCCTAGGACTGTTCCTGAAGATTGAACTCCGAAAGAGGAGCGATGTGATGAATAATTCTG 2606921 427069 NM_001171.5(ABCC6):c.473C>T (p.Ala158Val) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16219555 CTACCAACGCTGCCCAGCAGGCCTCCGGAGCGGTAAGTCGGGGCGTGGGCCACCCTGGGAA 796052995 201523 NM_001165963.1(SCN1A):c.3607C>T (p.Gln1203Ter) SCN1A Sep 07, 2012 MedGen:CN517202 not provided germline 2 166013842 CAAATCAATGTGGAAGAAGGCAGAGGAAAACAATGGTGGAACCTGAGAAGGACGTGTTTCC 137853292 28111 NM_000321.2(RB1):c.1700C>T (p.Ser567Leu) RB1 Dec 21, 1989 Human Phenotype Ontology:HP:0009919,MeSH:D012175,MedGen:C0035335,OMIM:180200,Orphanet:ORPHA790 Retinoblastoma germline 13 48452997 TTTTAATTTCATCATGTTTCATATAGGATTCACCTTTATTTGATCTTATTAAACAATCAAA 878854400 227486 NM_000523.3(HOXD13):c.742C>T (p.Gln248Ter) HOXD13 Aug 12, 2016 MedGen:C2699746,OMIM:186000,Orphanet:ORPHA93403 Synpolydactyly 1 germline 2 176093632 TGGAACAGCCAGGTGTACTGCACCAAGGACCAGCCACAGGGGTCCCACTTTTGGAAATCTT 397508500 68322 NM_000492.3(CFTR):c.3124C>T (p.Gln1042Ter) CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline 7 117610654 TATTTCCTCCAAACCTCACAGCAACTCAAACAACTGGAATCTGAAGGTATGACAGTGAATG 111033571 22390 NM_012210.3(TRIM32):c.388C>T (p.Pro130Ser) TRIM32 Sep 02, 2015 MedGen:C0752166,OMIM:209900,Orphanet:ORPHA110,SNOMED CT:5619004;MedGen:C1859569,OMIM:615988 Bardet-Biedl syndrome;Bardet-Biedl syndrome 11 germline 9 116698130 TGTGAGCCCTGCCGGGAGGCAGACCATCAGCCTCCTGGCCACTGTACACTCCCTGTCAAAG 121964988 27004 NM_000108.4(DLD):c.1463C>T (p.Pro488Leu) DLD Jun 01, 1993 MedGen:CN043137,OMIM:246900 Maple syrup urine disease, type 3 germline 7 107919098 AAGATATAGCTAGAGTCTGTCATGCACATCCGGTAATTATTAACAACATATAGAATTGATG 121912708 33034 NM_001182.4(ALDH7A1):c.328C>T (p.Arg110Ter) ALDH7A1 Jun 28, 2017 MedGen:C1849508,OMIM:266100;Human Phenotype Ontology:HP:0001250,MedGen:C0036572;Human Phenotype Ontology:HP:0002119,MedGen:C3278923;MedGen:CN517202 Pyridoxine-dependent epilepsy;Seizures;Ventriculomegaly;not provided germline;unknown 5 126583997 GCATTCTTTTCTTAGATTCCTGCTCCAAAACGAGGAGAAATAGTAAGACAGATTGGCGATG 765061840 237526 NM_025137.3(SPG11):c.1621C>T (p.Gln541Ter) SPG11 Apr 14, 2016 MedGen:C4225253,OMIM:616668,Orphanet:ORPHA466775 Charcot-Marie-Tooth disease, axonal type 2X maternal 15 44633619 TCCTCATTTCAGGCCGGGATAGAAAATCGTCAGCTGGACACAGTAAATTTCTTTTTGAAGA 587777497 143212 NM_021116.3(ADCY1):c.3112C>T (p.Arg1038Ter) ADCY1 Nov 20, 2014 MedGen:C1857809,OMIM:610154 Deafness, autosomal recessive 44 germline 7 45713747 CTGAGAAGGTGCCCCTACCACTTTGTGTGCCGAGGCAAAGTCAGTGTCAAGGGCAAAGGCG 104894837 25765 NM_000169.2(GLA):c.436C>T (p.Pro146Ser) GLA Jun 16, 2017 Human Phenotype Ontology:HP:0001071,MedGen:C0002986,OMIM:301500,Orphanet:ORPHA324,SNOMED CT:16652001 Fabry disease germline X 101401743 GATGTTGGAAATAAAACCTGCGCAGGCTTCCCTGGGAGTTTTGGATACTACGACATTGATG 267607162 22002 NM_006086.3(TUBB3):c.784C>T (p.Arg262Cys) TUBB3 Jan 14, 2016 MedGen:C2748801,OMIM:600638;MedGen:CN517202 Fibrosis of extraocular muscles, congenital, 3a, with or without extraocular involvement;not provided germline 16 89935235 AAGCTGGCCGTCAACATGGTGCCCTTCCCGCGCCTGCACTTCTTCATGCCCGGCTTCGCCC 886039260 259355 NM_001242896.1(DEPDC5):c.1393C>T (p.Gln465Ter) DEPDC5 Apr 13, 2016 Gene:50987,MedGen:C1858477,OMIM:604364 Epilepsy, familial focal, with variable foci 1 germline 22 31810589 ATCCAAGTAGATTATGACGCCTATGACGCTCAAGTGTTCAGGCTGCCCGGCCCATCCCGGG 878852989 236937 NM_000411.7(HLCS):c.2005C>T (p.His669Tyr) HLCS Jan 05, 2016 MedGen:CN517202 not provided germline 21 36756546 GTCCTTCCCCTTTATTACCGATACTGGGTCCACAGGTCAGTGCTGGCTCATCTTCATTCTT 794729287 198990 NM_001256850.1(TTN):c.72514C>T (p.Gln24172Ter) TTN Aug 08, 2014 MedGen:CN517202 not provided germline 2 178568695 GCATTCAGTAGTTACAGTGTACAGGTTGGCCAAGATTTGAAAATAGAAGTGCCAATTTCTG 1057516038 353908 NM_001244189.1(KIAA0586):c.949C>T (p.Gln317Ter) KIAA0586 Aug 28, 2015 MedGen:C4084822,OMIM:616490 Joubert syndrome 23 maternal 14 58444158 CACATAAGGCATCTTGAAAAGTTACAACAACAACAAATAGATATTCAGGTATCTGTAATAA 1064793753 407301 NM_000127.2(EXT1):c.250C>T (p.Gln84Ter) EXT1 Jul 13, 2015 MedGen:CN517202 not provided germline 8 118110797 GAGGATTCCAGCGTGCACATTTCCCCCCGGCAGAAGCGAGATGCCAACTCCAGCATCTACA 190057175 259673 NM_017739.3(POMGNT1):c.636C>T (p.Phe212=) POMGNT1 Aug 04, 2017 MedGen:CN517202 not provided germline 1 46194860 TGCCCTGGGCTGGAGGGACACATGGGCCTTCGTGGGACGAAAAGGAGGTGCCGGCATCAGA 1064796720 407536 NM_003165.3(STXBP1):c.748C>T (p.Gln250Ter) STXBP1 Mar 14, 2017 MedGen:CN517202 not provided germline 9 127666250 AGCTCCCCTGTGCTCCATGAATTGACTTTTCAGGCTATGAGTTATGATCTGCTGCCTATCG 759799287 419008 NM_025139.5(ARMC9):c.1027C>T (p.Arg343Cys) ARMC9 Aug 16, 2017 MedGen:CN262509;MedGen:CN399089,OMIM:617622 ARMC9-related Joubert syndrome;JOUBERT SYNDROME 30 germline;maternal 2 231262306 TCTCACTACTTTTGTTTTTCTTTGCTCCAGCGCTTGACCACATCCCATCCTGGAGAGCAGA 767595964 456982 NM_001277115.1(DNAH11):c.6130C>T (p.Arg2044Ter) DNAH11 Mar 09, 2017 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244 Ciliary dyskinesia germline 7 21698163 GAAGGTTTTGTGGATGCGCGTGCATTAGCCCGAAAGTTCATTACGTTGTACACGCTTTGCA 118204437 15739 NM_000512.4(GALNS):c.1156C>T (p.Arg386Cys) GALNS Apr 13, 2017 MedGen:C0086651,OMIM:253000,Orphanet:ORPHA309297,SNOMED CT:7259005;MedGen:CN517202 Mucopolysaccharidosis, MPS-IV-A;not provided germline 16 88824853 CTCCCATCCCACAGGCCTATCTTCTATTACCGTGGCGACACGCTGATGGCGGCCACCCTCG 794726797 187851 NM_001165963.1(SCN1A):c.1025C>T (p.Ala342Val) SCN1A Dec 20, 2014 MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002 Severe myoclonic epilepsy in infancy de novo 2 166048889 ATGCACTACTATGTGGAAATAGCTCTGATGCAGGGTAAGTCAATAATTTGTGTGTATCTGT 1057519734 362862 NM_002755.3(MAP2K1):c.790C>T (p.Pro264Ser) MAP2K1 Oct 02, 2014 Human Phenotype Ontology:HP:0002861,MeSH:D008545,MedGen:C0025202,SNOMED CT:2092003 Malignant melanoma somatic 15 66485086 GTAGAGATGGCGGTTGGGAGGTATCCCATCCCTCCTCCAGATGCCAAGGAGCTGGAGCTGA 756489804 200680 NM_138413.3(HOGA1):c.839C>T (p.Thr280Ile) HOGA1 Nov 27, 2014 MedGen:C3150878,OMIM:613616,Orphanet:ORPHA93600 Primary hyperoxaluria, type III germline 10 97611514 CTCTTCTAACAGGCCCTGCTTTGCAGGTGACCCGGCGCTTTGGGATCCCAGGGCTGAAGAA -1 445279 NM_130838.2(UBE3A):c.7C>T (p.Arg3Ter) UBE3A Oct 23, 2017 MedGen:CN517202 not provided germline 15 25375759 GCTTATTGTTTGAATGTTTGGTACAGGAAGCGAGCAGCTGCAAAGCATCTAATAGAACGCT 121918537 23802 NM_006204.3(PDE6C):c.85C>T (p.Arg29Trp) PDE6C Jun 27, 2013 MedGen:C2751308,OMIM:613093 Cone dystrophy 4 germline 10 93612810 TTTGCCAAGGAGTACTTTGACAGGAAGTTGCGGGTGGAGGTGCTGGGAGAAATCTTCAAGA 878853137 237494 NM_022068.3(PIEZO2):c.7067C>T (p.Thr2356Met) PIEZO2 Jun 04, 2014 MedGen:C1862472,OMIM:108145,Orphanet:ORPHA1154 Oculomelic amyoplasia inherited 18 10689746 AGCTGAGGGCAGTGATGGACTGGGTGTGGACGGACACAACTTTGAGCCTGTCCAGCTGGAT 886039395 260344 NM_000216.3(ANOS1):c.1891C>T (p.Arg631Ter) ANOS1 Jul 16, 2015 MedGen:CN517202 not provided germline X 8534412 GTGCCCAATCTGAGACCATCTACTCTTTACCGACTGGAAGTGCAAGTGCTGACCCCAGGAG 193922781 136891 NM_000540.2(RYR1):c.5183C>T (p.Ser1728Phe) RYR1 Jun 01, 2014 MedGen:CN031421,OMIM:145600;MedGen:CN517202 Malignant hyperthermia, susceptibility to, 1;not provided germline;unknown 19 38485838 ACCTCGAAAGTGCCTGCCGCAGCCGCCGCTCCATGCTCTCTGAATACATCGTGCCCCTCAC 28935491 265267 NM_000169.2(GLA):c.979C>T (p.Gln327Ter) GLA Aug 19, 2015 Human Phenotype Ontology:HP:0001071,MedGen:C0002986,OMIM:301500,Orphanet:ORPHA324,SNOMED CT:16652001 Fabry disease germline X 101398390 ATTGCCATCAATCAGGACCCCTTGGGCAAGCAAGGGTACCAGCTTAGACAGGTAAATAAGA 151340621 26836 NM_000084.4(CLCN5):c.1942C>T (p.Arg648Ter) CLCN5 Sep 25, 2014 MedGen:C1848336,OMIM:300009 Dent disease 1 germline X 50090678 TTTTTTCCTTCTGTTTGAATAGAAAATGCTCGAAAGAAACAGGATGGGGTTGTTAGCACTT 137852873 17418 NM_000709.3(BCKDHA):c.793C>T (p.Arg265Trp) BCKDHA Sep 12, 2016 MedGen:C1855369;MedGen:CN517202 Maple syrup urine disease type 1A;not provided germline 19 41422310 ACACTTGAGTGCCCCATCATCTTCTTCTGCCGGAACAATGGCTACGCCATCTCCACGCCCA 62635654 20771 NM_201253.2(CRB1):c.2290C>T (p.Arg764Cys) CRB1 Oct 01, 1999 MedGen:C1838647,OMIM:600105;MedGen:CN517202 Retinitis pigmentosa 12;not provided germline 1 197427615 GCTTTGGAAAACAGCACTTATCAATATATCCGTGTCTGGCTAGAGCGCGGCAGACTAGCAA 201787275 260478 NR_033294.1(SNORD118):n.145C>T SNORD118 Oct 10, 2016 MedGen:C3281200,OMIM:614561 Leukoencephalopathy, brain calcifications, and cysts germline 17 8173444 CCCTGATTGCTCCTGTCTGATTCTTTCTGACGATCACTTACATTTGTGTTATGCTGATTAG 866395428 431718 NM_181714.3(LCA5):c.838C>T (p.Arg280Ter) LCA5 Jan 01, 2015 MeSH:D057130,MedGen:C0339527,Orphanet:ORPHA65,SNOMED CT:193413001;Human Phenotype Ontology:HP:0000556,MedGen:C0854723,Orphanet:ORPHA71862,SNOMED CT:314407005 Leber congenital amaurosis;Retinal dystrophy unknown 6 79493633 GAAAATAAAGTTCTTCAAAAGGAGGTACAGCGACTATATCACAAATTAAAGGTAAGTATTT 587777211 108170 NM_004188.6(GFI1B):c.859C>T (p.Gln287Ter) GFI1B Sep 01, 1968 MedGen:C1861194,OMIM:187900 Platelet-type bleeding disorder 17 germline 9 132990916 AAGTGCCAGGTGTGCGGAAAGGCCTTCAGCCAGAGCTCCAACCTCATCACCCACAGCCGCA 104893905 24049 NM_004387.3(NKX2-5):c.646C>T (p.Arg216Cys) NKX2-5 Nov 20, 2001 Human Phenotype Ontology:HP:0001636,MedGen:C0039685,OMIM:187500,Orphanet:ORPHA3303,SNOMED CT:86299006 Tetralogy of Fallot germline 5 173232898 GGGCTGCCCCCGCCGCCGCCGCCGCCTGCCCGCAGGATCGCGGTGCCAGTGCTGGTGCGCG 886039695 259736 NM_014946.3(SPAST):c.508C>T (p.Gln170Ter) SPAST Aug 24, 2016 MedGen:CN517202 not provided germline 2 32089527 ATTTTAATTAATTTTTTTCTTTCAGGTGAACAGTGTGAAAGAGCTAGACGCCTTCAAGCTA 730880578 179227 NM_000256.3(MYBPC3):c.2893C>T (p.Gln965Ter) MYBPC3 May 10, 2013 MedGen:CN517202 not provided germline 11 47335054 CCTGTTACCACCACGGAGCCGGTGACAGTGCAGGAGATCCTGCGTGAGTGCCCCTTTGTGC 587777495 143205 NM_021072.3(HCN1):c.835C>T (p.His279Tyr) HCN1 Jun 01, 2014 MedGen:C4014531,OMIM:615871 Epileptic encephalopathy, early infantile, 24 germline 5 45645199 TTACGACTTTCAAGGTTAATTAGATACATACATCAATGGGAAGAGGTAAGATGCATCTTTT 28941475 17329 NM_015046.5(SETX):c.8C>T (p.Thr3Ile) SETX Aug 02, 2016 MedGen:C1865409,OMIM:602433,Orphanet:ORPHA357043;MedGen:CN517202 Amyotrophic lateral sclerosis type 4;not provided germline 9 132349421 TCTTTTCTGGCTGTAGGTACAGAATGAGCACATGTTGTTGGTGTACGCCAGGTGGTGCTTC 398123614 99655 NM_001110556.1(FLNA):c.2761C>T (p.Arg921Ter) FLNA Apr 08, 2013 MedGen:C0265251,OMIM:311300,Orphanet:ORPHA90650,SNOMED CT:54036001;MedGen:C1848213,OMIM:300049,OMIM:300537,SNOMED CT:448227009 Oto-palato-digital syndrome, type I;Periventricular nodular heterotopia 1 germline X 154362044 TTCTCAGGACTCACCAAGGGGGATGCAGTGCGAGATGTGGACATCATCGACCACCATGACA 137854503 24063 NM_178138.5(LHX3):c.629C>T (p.Ala210Val) LHX3 May 01, 2007 MedGen:C1857330,OMIM:221750 Pituitary hormone deficiency, combined 3 germline 9 136198798 GCCCCCAGGTTTGGTTCCAGAACCGCCGGGCCAAGGAGAAGAGGCTGAAGAAGGACGCCGG 587783215 167624 NM_018136.4(ASPM):c.1138C>T (p.Gln380Ter) ASPM Feb 08, 2013 MedGen:C1837501,OMIM:608716;MedGen:CN517202 Primary autosomal recessive microcephaly 5;not provided germline 1 197143114 TCTTTCATAAAAGATAATTATGGACTAAATCAGGATCTAGAATCAGAGTCAGTTAATCCTA 886040303 261566 NM_007294.3(BRCA1):c.5542C>T (p.Gln1848Ter) BRCA1 Oct 18, 2016 MedGen:C2676676,OMIM:604370 Breast-ovarian cancer, familial 1 germline 17 43045728 GTGTTGGACAGTGTAGCACTCTACCAGTGCCAGGAGCTGGACACCTACCTGATACCCCAGA 1131692203 424315 NM_000527.4(LDLR):c.1081C>T (p.Pro361Ser) LDLR Mar 30, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11111534 TCTCTTCCAGATATCGATGAGTGTCAGGATCCCGACACCTGCAGCCAGCTCTGCGTGAACC 201754030 165472 NM_005726.5(TSFM):c.856C>T (p.Gln286Ter) TSFM Jun 23, 2017 MedGen:C1864840,OMIM:610505,Orphanet:ORPHA168566;EFO:EFO_0000407,Human Phenotype Ontology:HP:0001644,MedGen:C0007193,Orphanet:ORPHA217604,SNOMED CT:195021004;MedGen:CN517202 Combined oxidative phosphorylation deficiency 3;Primary dilated cardiomyopathy;not provided germline 12 57796461 GGGGGAGAGGCAGAGACTAAGATGCTGTCCCAGCCGTATTTGCTGGATCCCTCCATTACCT 1085307899 415489 NM_006662.2(SRCAP):c.8242C>T (p.Arg2748Ter) SRCAP Sep 08, 2015 MedGen:CN517202 not provided germline 16 30738282 CCAGGACAACCACCAGGCCCCAAAGTGCTTCGAAAGCTGCCAGGACGGCTGGTAACTGTGG 28937905 19267 NM_024301.4(FKRP):c.160C>T (p.Arg54Trp) FKRP Jan 01, 2004 MedGen:C1846672,OMIM:607155,Orphanet:ORPHA34515 Limb-girdle muscular dystrophy-dystroglycanopathy, type C5 germline 19 46755610 GCTGCCGGCCCCCGTGTCACCGTCCTGGTGCGGGAGTTCGAGGCATTTGACAACGCGGTGC 863225078 214569 NM_001164144.2(CHAMP1):c.1945C>T (p.Gln649Ter) CHAMP1 Oct 16, 2015 MedGen:CN517202 not provided germline 13 114325787 ACAGATTTGGATGCGATGGATATTAAGGGCCAGGAATCAAGCAGTGATCAAGAGCAGGTTG 121917782 27138 NM_000196.3(HSD11B2):c.680C>T (p.Pro227Leu) HSD11B2 Sep 23, 2011 MedGen:C4017360 Apparent mineralocorticoid excess, mild germline 16 67436264 CCAATCCATCCGCAGGGGACATGCCATATCCGTGCTTGGGGGCCTATGGAACCTCCAAAGC 797044768 195213 NM_000169.2(GLA):c.916C>T (p.Gln306Ter) GLA May 12, 2014 Human Phenotype Ontology:HP:0001071,MedGen:C0002986,OMIM:301500,Orphanet:ORPHA324,SNOMED CT:16652001 Fabry disease germline X 101398453 ATGTCTAATGACCTCCGACACATCAGCCCTCAAGCCAAAGCTCTCCTTCAGGATAAGGACG -1 447230 NM_170707.3(LMNA):c.592C>T (p.Gln198Ter) LMNA Jun 19, 2017 MedGen:CN043576 Charcot-Marie-Tooth disease, type 2 germline 1 156134481 CTGCGGCGGGTGGATGCTGAGAACAGGCTGCAGACCATGAAGGAGGAACTGGACTTCCAGA 1057518245 360639 NM_003688.3(CASK):c.2368C>T (p.Gln790Ter) CASK Nov 22, 2016 MedGen:CN517202 not provided germline X 41531144 GGAAAGAATTATTACTTTGTATCTCATGACCAAATGATGCAAGACATCTCTAATAACGAGT 587781545 150881 NM_000051.3(ATM):c.283C>T (p.Gln95Ter) ATM Jun 14, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 11 108229275 TCAACACAAGCCTCCAGGCAGAAAAAGATGCAGGAAATCAGTAGTTTGGTCAAATACTTCA 864309693 213990 NM_012064.3(MIP):c.97C>T (p.Arg33Cys) MIP Jan 09, 2015 Human Phenotype Ontology:HP:0000519,MedGen:C1842324 Congenital cataract de novo 12 56454517 TATGTCTTCTTTGGGCTGGGGTCCTCACTGCGCTGGGCTCCTGGACCCCTGCATGTTCTGC 1131692333 424580 NM_024747.5(HPS6):c.2038C>T (p.Gln680Ter) HPS6 Jul 28, 2017 MedGen:C3888007,OMIM:614075 Hermansky-Pudlak syndrome 6 germline 10 102067512 ATCTTCAAACTGCTGCTGGCCGAGTTTGCCCAGCACCGCCGGCTTGATGCTCACCTCCCCC 180177294 200580 NM_000030.2(AGXT):c.907C>T (p.Gln303Ter) AGXT Nov 02, 2016 MedGen:C0268164,OMIM:259900,Orphanet:ORPHA93598,SNOMED CT:65520001 Primary hyperoxaluria, type I germline;unknown 2 240877597 GAGGCCGCGGCGTATCTGCATGGGCGCCTGCAGGCACTGGGGCTGCAGCTCTTCGTGAAGG 1114167845 419344 NM_000251.2(MSH2):c.940C>T (p.Gln314Ter) MSH2 Apr 14, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 2 47414416 ATTGCAGCAGTCAGAGCCCTTAACCTTTTTCAGGTAAAAAAAAAAAAAAAAAAAAAAAAAA 121918226 16266 NM_006363.5(SEC23B):c.649C>T (p.Arg217Ter) SEC23B Jan 30, 2014 MedGen:C1306589,OMIM:224100,Orphanet:ORPHA98873,SNOMED CT:68870007;MedGen:CN517202 Congenital dyserythropoietic anemia, type II;not provided germline 20 18524980 ACCAAGCCAGCCATGCCCATGCAGCAAGCACGACCTGCACAACCACAGGAGCACCCTTTTG 104894701 20795 NM_032551.4(KISS1R):c.991C>T (p.Arg331Ter) KISS1R Oct 23, 2003 MedGen:C4016875 Hypogonadotropic hypogonadism 8 without anosmia germline 19 920542 CTGCTCTACGCCTTCCTGGGCTCGCACTTCCGACAGGCCTTCCGCCGCGTCTGCCCCTGCG 587777192 106825 NM_005017.3(PCYT1A):c.847C>T (p.Arg283Ter) PCYT1A Mar 06, 2014 MedGen:C1837073,OMIM:608940,Orphanet:ORPHA85167 Spondylometaphyseal dysplasia with cone-rod dystrophy germline 3 196239597 GACCTCATTCAGAAGTGGGAGGAGAAGTCCCGAGAATTCATTGGAAGTTTTCTGGAAATGT 763670293 259829 NM_032119.3(ADGRV1):c.10213C>T (p.Arg3405Ter) ADGRV1 Jun 16, 2016 MedGen:CN517202 not provided germline 5 90728720 AGCTTCGTGTTGCATCAAAAACTCCCTGTCCGAGGTGTGCTGACCGTGGCCTTGTTCAACA 730880028 178368 NM_006000.2(TUBA4A):c.643C>T (p.Arg215Cys) TUBA4A Oct 22, 2014 MedGen:C4016414 Amyotrophic lateral sclerosis 22 with frontotemporal dementia germline 2 219251056 GACAACGAAGCAATCTATGACATCTGCCGCCGCAACCTAGACATCGAGCGCCCAACCTACA 886039330 259768 NM_000094.3(COL7A1):c.8329C>T (p.Arg2777Ter) COL7A1 Jan 05, 2016 MedGen:CN517202 not provided germline 3 48566539 ACATAGGGGCGGCCAGGGCCTGCCGGTCCTCGAGGCGAGAAGGGAGAAGCTGCACTGACGG 748486078 39546 NM_052872.3(IL17F):c.284C>T (p.Ser95Leu) IL17F Apr 01, 2011 MedGen:C3151405,OMIM:613956 Candidiasis, familial, 6 germline 6 52237139 GTGTCACTTGGGACCCCAACCGGTACCCCTCGGAAGTTGTACAGGCCCAGTGTAGGAACTT 28928870 31288 NM_000145.3(FSHR):c.1346C>T (p.Thr449Ile) FSHR Aug 21, 2003 MedGen:C0085083,OMIM:608115,Orphanet:ORPHA64739,SNOMED CT:129635004 Ovarian hyperstimulation syndrome germline 2 48963475 GGGCAGGCTGTGATGCTGCTGGCTTTTTCACTGTCTTTGCCAGTGAGCTGTCAGTCTACAC 786204492 186770 NM_019098.4(CNGB3):c.391C>T (p.Gln131Ter) CNGB3 Mar 27, 2017 MedGen:C1849792,OMIM:262300 Achromatopsia 3 unknown 8 86671046 GCTCCTGTTATAAATGAGTATGCCGATGCCCAGCTACACAACCTGGTGAAAAGAATGCGTC 121434315 16852 NM_152594.2(SPRED1):c.190C>T (p.Arg64Ter) SPRED1 Jul 01, 2009 MedGen:C1969623,OMIM:611431,Orphanet:ORPHA137605 Legius syndrome germline 15 38299530 GGCTGTGCTGACTTTTTTATCCGTGGAGAGCGACTCAGGGACAAAATGGTAATGAATAATG 119103281 17239 NM_024729.3(MYH14):c.359C>T (p.Ser120Leu) MYH14 Mar 27, 2017 MedGen:C1833503,OMIM:600652;MedGen:CN517202 Deafness, autosomal dominant 4;not provided germline 19 50210724 TGGCCGAGCTGACCTGCCTCAACGAGGCCTCGGTCCTGCACAACCTCCGGGAGCGGTACTA 1057519285 361782 NM_014727.2(KMT2B):c.7549C>T (p.Arg2517Trp) KMT2B Feb 01, 2017 MedGen:C4310633,OMIM:617284 Dystonia 28, childhood-onset germline 19 35737262 CATGGGGCTGCTCGGGCAGAGGTCTATCTCCGGTGAGAGGTCTGGGGTGTGATGCCTGGGT 786200949 185949 NM_001244008.1(KIF1A):c.206C>T (p.Ser69Leu) KIF1A Oct 27, 2014 MedGen:C0037773,Orphanet:ORPHA685,SNOMED CT:39912006 Hereditary spastic paraplegia de novo;inherited 2 240788208 TCCTCCAGCCTGAGGACATCAACTACGCGTCGCAGAAGCAGGTGTACCGGGACATCGGCGA 587777244 125903 NM_139242.3(MTFMT):c.452C>T (p.Pro151Leu) MTFMT Mar 01, 2014 MedGen:C3554182,OMIM:614947,Orphanet:ORPHA319524 Combined oxidative phosphorylation deficiency 15 germline 15 65023762 GCATATTGAATGTTCATCCCAGTTGCCTCCCGAGATGGCGTGGCCCAGCCCCTGTAATCCA 373905859 39956 NM_025099.5(CTC1):c.2518C>T (p.Arg840Trp) CTC1 Jan 22, 2012 MedGen:C2677299,OMIM:612199 Cerebroretinal microangiopathy with calcifications and cysts 1 germline 17 8231427 TTTGAAAAGGATGGTTCATCCTGCATATCTCGGCGTCCTCTGGAGTTGGCTGGCTGTGCAT 111033774 36612 NM_000155.3(GALT):c.865C>T (p.Leu289Phe) GALT Dec 04, 2012 MedGen:C0268151,OMIM:230400,Orphanet:ORPHA79239,SNOMED CT:124354006 Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase not provided 9 34649042 ATGAAGAAGCTCTTGACCAAGTATGACAACCTCTTTGAGACGTCCTTTCCCTACTCCATGG 1064792999 404642 NM_205768.2(ZBTB18):c.583C>T (p.Arg195Ter) ZBTB18 Apr 14, 2017 Gene:100190984,MedGen:C2676727,OMIM:612337 Mental retardation, autosomal dominant 22 germline 1 244054357 TTGGCGGCCGAGCCTGGGAACATGTGGATGCGATTGCCCTCAGACTCAGCAGGCATCCCCC 121909388 16344 NM_001174089.1(SLC4A11):c.1418C>T (p.Ser473Leu) SLC4A11 Mar 01, 2008 MedGen:C0544008 Corneal endothelial dystrophy germline 20 3230258 TCTGATGAGGCTCATGGCCTCCTGGCAGGTCGACGGAGGAGATCATCGCCCTCTTCATTTC 104894672 22457 NM_000554.5(CRX):c.121C>T (p.Arg41Trp) CRX Dec 01, 1997 MedGen:CN074280,OMIM:120970;MedGen:CN517202 Cone-rod dystrophy 2;not provided germline 19 47836263 CCCACCCCAGGCGCCCCCAGGAAGCAGCGGCGGGAGCGCACCACCTTCACCCGGAGCCAAC 137852725 76644 NM_024757.4(EHMT1):c.3229C>T (p.Gln1077Ter) EHMT1 Oct 05, 2010 MedGen:C0795833,OMIM:610253,Orphanet:ORPHA261494 Chromosome 9q deletion syndrome not provided 9 137814479 GACTGCTCCTCCAGCAACTGCATGTGCGGCCAGCTCAGCATGCGCTGCTGGTACGACAAGG 200089714 230227 NM_002180.2(IGHMBP2):c.127C>T (p.Arg43Ter) IGHMBP2 Mar 03, 2017 MedGen:CN169884;MedGen:C1858517,OMIM:604320,Orphanet:ORPHA98920;MedGen:CN517202 Distal hereditary motor neuronopathy;Spinal muscular atrophy, distal, autosomal recessive, 1;not provided germline 11 68906109 GAGAACATCTCTCTGAAAGAGCTCCAGAGCCGAGGCGTGTGTTTGCTGAAGCTGCAGGTAT 80338686 16937 NM_000060.4(BTD):c.1612C>T (p.Arg538Cys) BTD Jun 10, 2016 MedGen:C0220754,OMIM:253260,Orphanet:ORPHA79241,SNOMED CT:8808004 Biotinidase deficiency germline;unknown 3 15645468 TCTGGGCTGGTGACGGCGGCTCTCTATGGGCGCTTGTATGAGAGGGACTAGGAAAAGTGTG 80356864 68974 NM_007294.3(BRCA1):c.160C>T (p.Gln54Ter) BRCA1 Sep 08, 2016 MedGen:C2676676,OMIM:604370;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 1;Hereditary cancer-predisposing syndrome germline 17 43106508 TATAGATTTTGCATGCTGAAACTTCTCAACCAGAAGAAAGGGCCTTCACAGTGTCCTTTAT 121909026 22219 NM_000492.3(CFTR):c.3937C>T (p.Gln1313Ter) CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline;unknown 7 117652905 AACTTGGATCCCTATGAACAGTGGAGTGATCAAGAAATATGGAAAGTTGCAGATGAGGTAA 756613387 434242 NM_000527.4(LDLR):c.666C>T (p.Cys222=) LDLR - MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11105572 CAGCTGGCGCTGTGATGGTGGCCCCGACTGCAAGGACAAATCTGACGAGGAAAACTGCGGT 1052484950 431530 NM_022124.5(CDH23):c.9412C>T (p.Arg3138Trp) CDH23 Sep 26, 2017 MedGen:CN432550,OMIM:617540 PITUITARY ADENOMA 5, MULTIPLE TYPES germline 10 71812511 GCCAACCCTGTGTGGCTGGATCCCTTCTGTCGGAACCTGGAGCTGGCCGCCCAGGCGGAGC 730882029 180988 NM_000546.5(TP53):c.1024C>T (p.Arg342Ter) TP53 Sep 07, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0085390,Orphanet:ORPHA524,SNOMED CT:428850001;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Li-Fraumeni syndrome;not provided germline 17 7670685 ATCCGTGGGCGTGAGCGCTTCGAGATGTTCCGAGAGCTGAATGAGGCCTTGGAACTCAAGG 796052128 200985 NM_001244189.1(KIAA0586):c.1159C>T (p.Gln387Ter) KIAA0586 Sep 01, 2015 MedGen:C4084822,OMIM:616490 Joubert syndrome 23 germline;unknown 14 58450617 AAAGAAGTTGAAGATACGAGTTTTGATAAACAGAAATCTCCTTTGGAGACACCAGCACCTC 752792782 483117 NM_178170.2(NEK8):c.379C>T (p.Arg127Ter) NEK8 Feb 14, 2018 MedGen:C3809434,OMIM:615415 Renal-hepatic-pancreatic dysplasia 2 germline 17 28734897 CATCATGTGCACACCCACCTCATCCTGCACCGAGACCTCAAGACCCAGAACATCCTGCTTG 1064797083 411533 NM_002017.4(FLI1):c.1009C>T (p.Arg337Trp) FLI1 Apr 25, 2017 MedGen:CN242283,OMIM:617443 Bleeding disorder, platelet-type, 21 germline 11 128810638 AAGCCCAACATGAATTACGACAAGCTGAGCCGGGCCCTCCGTTATTACTATGATAAAAACA 587779527 106974 NM_000090.3(COL3A1):c.1786C>T (p.Arg596Ter) COL3A1 Jun 19, 2017 MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000;MedGen:CN517202 Ehlers-Danlos syndrome, type 4;not provided germline 2 188997189 CTTTAGGGTGCTCCTGGTAAGAATGGAGAACGAGGTGGCCCTGGAGGACCTGGCCCTCAGG 1029096863 453275 NM_172250.2(MMAA):c.586C>T (p.Arg196Ter) MMAA Dec 22, 2016 MedGen:C1855109,OMIM:251100,Orphanet:ORPHA79310 Methylmalonic aciduria cblA type germline 4 145646009 GTTTTAGGATCACTCTTAGGTGATAAAACCCGAATGACTGAGTTATCAAGAGATATGAATG 587784359 169811 NM_003560.3(PLA2G6):c.673C>T (p.His225Tyr) PLA2G6 Aug 10, 2015 Human Phenotype Ontology:HP:0012675,MedGen:C4021076;MedGen:CN517202 Iron accumulation in brain;not provided germline 22 38140106 CAGGTGAATAACCAAGGGCTGACCCCGCTGCACCTGGCCTGCCAGCTGGGGAAGCAGGAGA 863225074 214571 NM_032436.3(CHAMP1):c.1969C>T (p.Gln657Ter) CHAMP1 Jan 15, 2015 MedGen:CN517202 not provided germline 13 114325811 AAGGGCCAGGAATCAAGCAGTGATCAAGAGCAGGTTGATGTGGAATCCATTGATTTTAGCA 387906654 38752 NM_006749.4(SLC20A2):c.1784C>T (p.Thr595Met) SLC20A2 Feb 12, 2012 Gene:23706,MedGen:C0393590,OMIM:213600,Orphanet:ORPHA1980,SNOMED CT:110997000 Idiopathic basal ganglia calcification 1 germline 8 42428768 CCTCCAACATCGGGCTTCCAGTCAGCACCACGCACTGTAAGGTAGGCCCCTGCTAGCCGGG 876658862 233534 NM_000535.6(PMS2):c.1198C>T (p.Gln400Ter) PMS2 Mar 24, 2015 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 7 5987567 GCGGATTTGGAAAAGCCCATGGTAGAAAAGCAGGATCAATCCCCTTCATTAAGGACTGGAG 128625228 26249 NM_004006.2(DMD):c.5551C>T (p.Gln1851Ter) DMD Sep 16, 2015 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Duchenne muscular dystrophy germline X 32345978 GAGAGAAAGCGAGAGGAAATAAAGATAAAACAGCAGCTGTTACAGACAAAACATAATGCTC 199848801 76706 NM_194248.2(OTOF):c.3400C>T (p.Arg1134Ter) OTOF Apr 26, 2011 MedGen:C1832828,OMIM:601071 Deafness, autosomal recessive 9 not provided 2 26473999 ATGGGCATCCGGCCCGTGCTCAGCAAGTACCGAGTGGAGGTGCGAGGGCTCTGTGTGGCCC 118192164 28022 NM_000540.2(RYR1):c.10579C>T (p.Pro3527Ser) RYR1 Jun 01, 2002 MedGen:C4016368;MedGen:CN517202 Central core disease, autosomal recessive;not provided germline;unknown 19 38525455 ATGCTGCCCATCGGCCTGAATATGTGTGCGCCCACCGACCAAGACCTCATCACGCTGGCCA 397516259 179689 NM_000257.3(MYH7):c.610C>T (p.Arg204Cys) MYH7 Jun 07, 2013 MedGen:CN517202 not provided germline 14 23431790 TACTTTGCTGTTATTGCAGCCATTGGGGACCGCAGCAAGAAGGACCAGAGCCCGGGCAAGG 72551322 19293 NM_000784.3(CYP27A1):c.1435C>T (p.Arg479Cys) CYP27A1 Aug 01, 2013 MedGen:C0238052,OMIM:213700,Orphanet:ORPHA909,SNOMED CT:63246000 Cholestanol storage disease germline 2 218814716 TTTGGCTATGGGGTCCGGGCCTGCCTGGGCCGCAGGATTGCAGAGCTGGAGATGCAGCTAC 104894366 48924 NM_004985.4(KRAS):c.101C>T (p.Pro34Leu) KRAS Apr 03, 2017 MeSH:D009634,MedGen:C0028326,Orphanet:ORPHA648,SNOMED CT:205824006;MedGen:CN166718,Orphanet:ORPHA98733;MedGen:CN517202 Noonan syndrome;Rasopathy;not provided germline 12 25245284 TTCAGAATCATTTTGTGGACGAATATGATCCAACAATAGAGGTAAATCTTGTTTTAATATG 137852285 25566 NM_000292.2(PHKA2):c.3025C>T (p.Gln1009Ter) PHKA2 Jan 01, 1995 MedGen:C0017927,OMIM:306000 Glycogen storage disease type IXa1 germline X 18901487 GGCATTAACAGACTGAGGAGTGAAATGAAACAGGTAAGAACACCTCAGTGGCAGCGAGGGA 549138385 409850 NM_016239.3(MYO15A):c.4519C>T (p.Arg1507Ter) MYO15A Mar 06, 2017 MedGen:CN517202 not provided germline 17 18135747 GCACAGGAGGTGGCCTCAGTGGTGAGTGCCCGAGAGATCCAGGCCGTGGCAGAGCTGCTGC 111033628 25938 NM_002351.4(SH2D1A):c.172C>T (p.Gln58Ter) SH2D1A Oct 01, 1998 MedGen:C1868674,OMIM:308240 Lymphoproliferative syndrome 1, X-linked germline X 124365795 CACGGTTACATTTATACATACCGAGTGTCCCAGACAGAAACAGGTTCTTGGAGTGCTGAGG 754912778 198433 NM_004572.3(PKP2):c.1063C>T (p.Arg355Ter) PKP2 Dec 15, 2015 MedGen:CN517202 not provided germline 12 32869034 AGGAATGCAGACATGGAGATGACTCTGGAGCGAGCAGTGAGTATGCTCGAGGCAGACCACA -1 227574 NM_019597.4(HNRNPH2):c.626C>T (p.Pro209Leu) HNRNPH2 Oct 07, 2016 MedGen:C4310814,OMIM:300986;MedGen:CN517202 Mental retardation, X-linked, syndromic, Bain type;not provided germline X 101412614 GAAAGCTCATGGCTATGCAGCGGCCAGGTCCCTATGATAGGCCGGGGGCTGGCAGAGGGTA 80356952 68980 NM_007294.3(BRCA1):c.1630C>T (p.Gln544Ter) BRCA1 Sep 08, 2016 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome germline 17 43093901 CAGGGAACTAACCAAACGGAGCAGAATGGTCAAGTGATGAATATTACTAATAGTGGTCATG 786204455 187023 NM_000271.4(NPC1):c.3175C>T (p.Arg1059Ter) NPC1 Sep 29, 2015 MedGen:C3179455,OMIM:257220 Niemann-Pick disease type C1 germline;unknown 18 23536743 GCTGACTTTATTGACGCTCTGAAGAAAGCCCGACTTATAGCCAGTAATGTCACCGAAACCA 766773277 209179 NM_006517.4(SLC16A2):c.940C>T (p.Arg314Ter) SLC16A2 Jun 11, 2014 MedGen:C0795889,OMIM:300523,Orphanet:ORPHA59 Allan-Herndon-Dudley syndrome germline X 74524723 CTGGCTCAGCTCAGGAAGTACTTCAACATGCGAGTGTTCCGCCAACGCACTTACCGCATCT -1 428500 NM_000165.4(GJA1):c.119C>T (p.Ala40Val) GJA1 Jan 28, 2016 MedGen:C0812437,OMIM:164200 Oculodentodigital dysplasia germline 6 121446966 TCATTTTCCGAATCCTGCTGCTGGGGACAGCGGTTGAGTCAGCCTGGGGAGATGAGCAGTC 397515401 48068 NM_015338.5(ASXL1):c.2893C>T (p.Arg965Ter) ASXL1 May 25, 2016 MedGen:C0796232,OMIM:605039;MedGen:CN517202 C-like syndrome;not provided germline 20 32435605 AGCCTTACTTCACTCTGGACTGTGCCATCTCGAGGAGGCAGTGACAGCAATGGCAGTTACT -1 427094 NM_001171.5(ABCC6):c.46C>T (p.Gln16Ter) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16221822 GTCCTCTTTGTGTTCCCTCAGGTCTGGAACCAGACAGAGCCTGAACCTGCCGCCACCAGCC 587778803 76791 NM_000193.3(SHH):c.625C>T (p.Gln209Ter) SHH Aug 29, 2013 MedGen:C1840529,OMIM:142945 Holoprosencephaly 3 not provided 7 155803664 TTCCCGGGCTCGGCCACGGTGCACCTGGAGCAGGGCGGCACCAAGCTGGTGAAGGACCTGA 34126013 181693 NM_001128425.1(MUTYH):c.721C>T (p.Arg241Trp) MUTYH Jun 12, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1837991,OMIM:608456,Orphanet:ORPHA247798;MedGen:CN517202 Hereditary cancer-predisposing syndrome;MYH-associated polyposis;not provided germline;unknown 1 45332458 GCAACCGGTGTGGTGGATGGCAACGTAGCACGGGTGCTGTGCCGTGTCCGAGCCATTGGTG 119476050 19391 NM_015915.4(ATL1):c.1243C>T (p.Arg415Trp) ATL1 Aug 31, 2016 MeSH:D030342,MedGen:C0950123;MedGen:C2931355,OMIM:182600,Orphanet:ORPHA100984 Inborn genetic diseases;Spastic paraplegia 3 germline 14 50628154 GTGAAGAAGATGGGTGGGGAAGAATTTAGCCGGCGTTACCTGCAGCAGTTGGAGAGTGAAA 77838305 466366 NM_145239.2(PRRT2):c.649C>T (p.Arg217Ter) PRRT2 Jun 29, 2017 MedGen:C1868682,OMIM:128200 Dystonia 10 germline 16 29813703 AAATCCCCCCCAGCCAATGGGGCCCCCCCCCGAGTGCTGCAGCAGCTGGTTGAGGAGGATC 869025335 223738 NM_032833.4(PPP1R15B):c.1972C>T (p.Arg658Cys) PPP1R15B Feb 16, 2016 MedGen:C4225195,OMIM:616817 Microcephaly, short stature, and impaired glucose metabolism 2 germline 1 204406262 ACTGAGTATTATATAAGTGGTGATGAGGATCGCAAAGGACCATGGGAAGAATTTGCAAGGG 387906758 39038 NM_007315.3(STAT1):c.820C>T (p.Arg274Trp) STAT1 Aug 21, 2012 MedGen:C3279990,OMIM:614162,Orphanet:ORPHA391487 Immunodeficiency 31C de novo;germline 2 190995185 ACTATAGTTGCGGAGAGTCTGCAGCAAGTTCGGCAGCAGCTTAAAAAGTTGGAGGAATTGG 111033823 36667 NM_000155.3(GALT):c.1108C>T (p.Gln370Ter) GALT Dec 04, 2012 MedGen:C0268151,OMIM:230400,Orphanet:ORPHA79239,SNOMED CT:124354006 Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase not provided 9 34650417 GCACTTCCTGAGGTTCATTACCACCTGGGGCAGAAGGACAGGGAGACAGCAACCATCGCCT 869025563 224663 NM_004425.3(ECM1):c.826C>T (p.Gln276Ter) ECM1 Nov 19, 2015 MedGen:C0023795,OMIM:247100,Orphanet:ORPHA530,SNOMED CT:38692000 Lipid proteinosis germline 1 150511574 CGGTTCTCCTGCTTCCAGGAGGAAGCTCCCCAGCCACACTACCAGCTCCGGGCCTGCCCCA 863225150 214372 NM_030578.3(B9D2):c.220C>T (p.Pro74Ser) B9D2 Feb 23, 2015 Human Phenotype Ontology:HP:0002335,MedGen:C0431399,Orphanet:ORPHA475,SNOMED CT:253175003,SNOMED CT:716997004 Joubert syndrome unknown 19 41355008 TTCCCCTCTCTCTCCTTTCCTGCAGGCTGGCCCCGGCTCCATTTCCAGGTGTGGTCCCAGG 1057520652 377560 NM_004380.2(CREBBP):c.2302C>T (p.Arg768Ter) CREBBP Apr 19, 2015 MedGen:CN517202 not provided germline 16 3773912 GTTGTCTCGTAGATGGCCATTTCTCCTTCCCGAATGCCTCAGCCTCCGAACATGATGGGTG 768943773 132070 NM_001111.4(ADAR):c.1630C>T (p.Arg544Ter) ADAR Feb 01, 2014 MedGen:C3539013,OMIM:615010 Aicardi-goutieres syndrome 6 germline 1 154598557 AGATTTAAATTCCAGGTTGTCATCAATGGCCGAGAGTTTCCCCCAGCTGAAGCTGGAAGCA 886042927 268944 NM_000070.2(CAPN3):c.1957C>T (p.Gln653Ter) CAPN3 Nov 10, 2015 MedGen:C1869123,OMIM:253600,Orphanet:ORPHA267 Limb-girdle muscular dystrophy, type 2A germline 15 42409345 AGCTCTGATCAGGAAAGTGAGGAACAGCAACAATTCCGGAACATTTTCAAGCAGATAGCAG 727503864 177442 NM_004006.2(DMD):c.883C>T (p.Arg295Ter) DMD Jan 17, 2014 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009;MedGen:C3668940,OMIM:302045;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Becker muscular dystrophy;Dilated cardiomyopathy 3B;Duchenne muscular dystrophy germline X 32697947 GGATATGAGAGAACTTCTTCCCCTAAGCCTCGATTCAAGAGCTATGCCTACACACAGGCTG 45455296 58488 NM_000548.4(TSC2):c.4846C>T (p.Gln1616Ter) TSC2 May 05, 2016 MedGen:C1860707,OMIM:613254;MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000 Tuberous sclerosis 2;Tuberous sclerosis syndrome germline 16 2086376 TTCACCTACTGCTGGCACGATGACATCATGCAAGGTACGGCCTGGCGCCTACCCGCTCCTG 753334568 136359 NM_001267550.2(TTN):c.95195C>T (p.Pro31732Leu) TTN Nov 18, 2016 MedGen:C1863599,OMIM:603689,Orphanet:ORPHA178464 Hereditary myopathy with early respiratory failure germline 2 178546041 AGGAGAAGTGCACTTTAGCCTGGAGCCTTCCGCAGGAAGACGGAGGAGCAGAAATCACTCA 104893694 23362 NM_000388.3(CASR):c.452C>T (p.Thr151Met) CASR Oct 10, 1996 MedGen:C0342345,OMIM:601198 Hypocalcemia, autosomal dominant 1 germline 3 122257347 TGGTGGGAGCAACTGGCTCAGGCGTCTCCACGGCAGTGGCAAATCTGCTGGGGCTCTTCTA 202033121 55629 NM_033056.3(PCDH15):c.3316C>T (p.Arg1106Ter) PCDH15 May 18, 2017 MedGen:C1836027,OMIM:609533;MedGen:C1832845,OMIM:601067;MedGen:C1865885,OMIM:602083;MedGen:C1865885,OMIM:602083 Deafness, autosomal recessive 23;Usher syndrome, type 1D;Usher syndrome, type 1F;Usher syndrome, type 1F germline;unknown 10 53938872 GATTATGAGACCAGGACAAGCTATGTACTTCGAGTCCAAGCTGATTCCCTGGAAGTGGTCC 587779212 94671 NM_000179.2(MSH6):c.1483C>T (p.Arg495Ter) MSH6 Aug 26, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0009405,Orphanet:ORPHA443090;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Hereditary nonpolyposis colon cancer;Lynch syndrome;not provided germline;unknown 2 47799466 CAGACTGAGACTCCAGAAATGATGGAGGCACGATGTAGAAAGATGGCACATATATCCAAGT 876661256 474637 NM_000535.6(PMS2):c.1345C>T (p.Gln449Ter) PMS2 Mar 07, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 7 5987420 ACTCCAGAACCAAGAAGGAGCCCTCTAGGACAGAAAAGGGGTATGCTGTCTTCTAGCACTT 121434641 23828 NM_000107.2(DDB2):c.937C>T (p.Arg313Ter) DDB2 Aug 01, 1999 MedGen:C1848411,OMIM:278740,SNOMED CT:56048001 Xeroderma pigmentosum, group E germline 11 47235326 CTCCTGACCACGGACCAGAAGAGCGAGATCCGAGTTTACTCTGCTTCCCAGTGGGACTGCC 45479192 59259 NM_000548.4(TSC2):c.4762C>T (p.Gln1588Ter) TSC2 Jun 13, 2013 MedGen:C1860707,OMIM:613254;MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000 Tuberous sclerosis 2;Tuberous sclerosis syndrome germline 16 2086292 CTGGGCCGGCTCATCGAGCTGAAGGACTGCCAGCCGGACAAGGTGTACCTGGGAGGCCTGG 267606701 15318 NM_001159772.1(CANT1):c.898C>T (p.Arg300Cys) CANT1 Nov 01, 2009 MedGen:C4012146,OMIM:251450 Desbuquois dysplasia 1 germline 17 78993858 GACACGCTGCAGCGCTGGTTCTTCCTGCCGCGCCGCGCCAGCCAGGAGCGCTACAGCGAGA 1060503102 391638 NM_021007.2(SCN2A):c.4876C>T (p.Arg1626Ter) SCN2A Sep 22, 2016 MedGen:C1843140,OMIM:607745,Orphanet:ORPHA140927;MedGen:C3150987,OMIM:613721 Benign familial neonatal-infantile seizures;Early infantile epileptic encephalopathy 11 germline 2 165388682 GAAAAGTATTTTGTGTCCCCTACCCTGTTCCGAGTGATCCGTCTTGCCAGGATTGGCCGAA 771328239 395200 NM_004168.3(SDHA):c.985C>T (p.Arg329Ter) SDHA Oct 12, 2016 MedGen:C1855008,OMIM:252011,Orphanet:ORPHA3208;MedGen:C3279992,OMIM:614165 Mitochondrial complex II deficiency;Paragangliomas 5 germline 5 233566 ATTAACAGTCAAGGCGAAAGGTTTATGGAGCGATACGCCCCTGTCGCGAAGGACCTGGCGT -1 442072 NM_000068.3(CACNA1A):c.2746C>T (p.Gln916Ter) CACNA1A Dec 30, 2016 MedGen:CN517202 not provided germline 19 13298899 GACCACCACGCCCGGGAGGGCAGCCTGGAGCAACCCGGGTTCTGGGAGGGCGAGGCCGAGC 387907155 40222 NM_017415.2(KLHL3):c.1193C>T (p.Ala398Val) KLHL3 Mar 11, 2012 MedGen:C3469605,OMIM:614495,Orphanet:ORPHA300525 Pseudohypoaldosteronism type 2D germline 5 137638979 GCGCAGCGGTGCTCAATGACTTGCTCTACGCAGTGGGAGGCTTTGATGGCAGTACTGGTAG 118203993 16322 NM_032790.3(ORAI1):c.271C>T (p.Arg91Trp) ORAI1 Mar 21, 2008 MedGen:C2748568,OMIM:612782,Orphanet:ORPHA317428 Immune dysfunction with T-cell inactivation due to calcium entry defect 1 germline 12 121627018 TTGAGCCGCGCCAAGCTTAAAGCCTCCAGCCGGACCTCGGCTCTGCTCTCCGGCTTCGCCA 120074157 17849 NM_025074.6(FRAS1):c.9013C>T (p.Gln3005Ter) FRAS1 Jun 01, 2003 MedGen:C0265233,OMIM:219000,SNOMED CT:204102004 Cryptophthalmos syndrome germline 4 78496859 CACGATGACTCCATGTTTGAGCCAGAGGAACAGTTCAGGGTCTACCTCGGCCTTCCTCTTG 111033580 27786 NM_000732.4(CD3D):c.202C>T (p.Arg68Ter) CD3D Nov 01, 2011 MedGen:C3810147,OMIM:615617 Immunodeficiency 19 germline 11 118340447 CTGGACCTGGGAAAACGCATCCTGGACCCACGAGGAATATATAGGTGTAATGGGACAGATA 755825264 486987 NM_004628.4(XPC):c.463C>T (p.Arg155Ter) XPC Jul 21, 2016 MedGen:C0043346,Orphanet:ORPHA910,SNOMED CT:44600005 Xeroderma pigmentosum germline 3 14168330 GGTGACGTGAGAGAAAGTACAGCCTTCTCTCGATCTCTTCTGCCTGTGAAGCCAGTGGAGA 786204797 187139 NM_032790.3(ORAI1):c.412C>T (p.Leu138Phe) ORAI1 Mar 30, 2015 MedGen:C4014557,OMIM:615883 Myopathy, tubular aggregate, 2 germline 12 121641149 ACAGTGCTGGTGGCTGTGCACCTGTTTGCGCTCATGATCAGCACCTGCATCCTGCCCAACA 758253791 247730 NM_014191.3(SCN8A):c.2003C>T (p.Thr668Ile) SCN8A Feb 19, 2016 MedGen:C3281191,OMIM:614558 Early infantile epileptic encephalopathy 13 germline 12 51745907 TTGCTTTTCTTTTTTTTTTTTTAAAGGCTACAACTGAGGTGGAAATTAAGAAGAAAGGCCC 786204021 185776 NM_005957.4(MTHFR):c.1042C>T (p.Pro348Ser) MTHFR - MedGen:C1856058,OMIM:236250 Homocysteinemia due to MTHFR deficiency germline 1 11794853 CTGTCCCCATCCTCACCCAGGCGTCCCCTACCCTGGGCTCTCAGCGCCCACCCCAAGCGCC 63749820 95691 NM_000249.3(MLH1):c.436C>T (p.Gln146Ter) MLH1 Apr 07, 2017 MedGen:C0009405,Orphanet:ORPHA443090;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Hereditary nonpolyposis colon cancer;Lynch syndrome germline 3 37007046 AAAGCCCCTCCTAAACCATGTGCTGGCAATCAAGGGACCCAGATCACGGTAAGAATGGTAC 786203821 184272 NM_024675.3(PALB2):c.940C>T (p.Gln314Ter) PALB2 Oct 19, 2017 MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Familial cancer of breast;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline 16 23635606 CTTGTAAATAAAGCTATAAGTAAAAGTGGCCAACTGCCCACAAGTTCTAATTTAGAGGCAA 587784563 168027 NM_014795.3(ZEB2):c.1956C>T (p.Tyr652=) ZEB2 Feb 08, 2013 MedGen:C1856113,OMIM:235730,Orphanet:ORPHA2152 Mowat-Wilson syndrome germline 2 144399231 GAAAGGAATGACAAGCCCCATCAACCCATACAAGGACCACATGTCTGTACTCAAAGCATAC 121434585 30961 NM_005272.3(GNAT2):c.235C>T (p.Gln79Ter) GNAT2 Aug 01, 2002 MedGen:C1841721,OMIM:613856 Achromatopsia 4 germline 1 109610108 TTCAAGGCTATCATCTATGGAAATGTGCTGCAGTCCATCCTGGCTATCATCCGGGCCATGA 137852556 24917 NM_000451.3(SHOX):c.517C>T (p.Arg173Cys) SHOX May 01, 2016 MedGen:C0432230,OMIM:249700,Orphanet:ORPHA2632,SNOMED CT:38494008;MedGen:C0265309,OMIM:127300;MedGen:C1845118,OMIM:300582,Orphanet:ORPHA314795 Langer mesomelic dysplasia syndrome;Leri Weill dyschondrosteosis;Short stature, idiopathic, X-linked de novo;germline X 640851 GTTTGGTTCCAGAACCGGAGAGCCAAGTGCCGCAAACAAGAGAATCAGATGCATAAAGGTG 724160020 172151 NM_004208.3(AIFM1):c.1264C>T (p.Arg422Trp) AIFM1 Aug 01, 2015 Gene:751798,MedGen:C1845095,OMIM:300614,Orphanet:ORPHA139583 Deafness, X-linked 5 germline;unknown X 130136086 CTGGAAATAGACTCAGATTTTGGTGGCTTCCGGGTAAATGCAGAGCTACAAGCACGCTCTA 762754992 204363 NM_000083.2(CLCN1):c.1649C>T (p.Thr550Met) CLCN1 Aug 06, 2015 MedGen:C0027127,Orphanet:ORPHA206973 Myotonia congenita germline 7 143341995 TCTCCACAGCTGTGATTTGCTTCGAATTAACGGGTCAGATTGCTCACATCCTGCCCATGAT 368980595 233409 NM_005732.3(RAD50):c.3229C>T (p.Arg1077Ter) RAD50 Jul 31, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 5 132618134 ATAAAAAGAAATCATAATTTGGCATTAGGGCGACAGAAAGGTTATGAAGAAGAAATTATTC 119472029 19104 NM_014080.4(DUOX2):c.1126C>T (p.Arg376Trp) DUOX2 Oct 01, 2005 MedGen:C1846632,OMIM:607200 Thyroid dyshormonogenesis 6 germline 15 45109895 GCTCTCAGGGTCTGCAACAACTACTGGATTCGGGAGGTCAGACTGGGGTCAGGGTCAGGGG 121918257 16926 NM_000255.3(MUT):c.322C>T (p.Arg108Cys) MUT Apr 21, 2017 MedGen:C1855115;MedGen:C1855114,OMIM:251000;MedGen:C1855114,OMIM:251000 METHYLMALONIC ACIDURIA, mut(0) TYPE;Methylmalonic aciduria due to methylmalonyl-CoA mutase deficiency;Methylmalonic aciduria due to methylmalonyl-CoA mutase deficiency germline 6 49459145 ACCATGTATACCTTTAGGCCCTGGACCATCCGCCAGTATGCTGGTTTTAGTACTGTGGAAG 587783360 167916 NM_003688.3(CASK):c.2041C>T (p.Arg681Ter) CASK Jun 03, 2016 MedGen:C2677903,OMIM:300749,Orphanet:ORPHA163937;MedGen:CN517202 Mental retardation and microcephaly with pontine and cerebellar hypoplasia;not provided germline X 41542805 TATTTTATTTTTCTTTTTGTATGTGCTAGGCGAGTAGCTTGCATTGCCATGGAGAAGACCA 587783057 166274 NM_001128425.1(MUTYH):c.1171C>T (p.Gln391Ter) MUTYH Jun 09, 2017 MedGen:C0699790,OMIM:114500,SNOMED CT:269533000;MedGen:C0027672,SNOMED CT:699346009;MedGen:C1837991,OMIM:608456,Orphanet:ORPHA247798;MedGen:CN517202 Carcinoma of colon;Hereditary cancer-predisposing syndrome;MYH-associated polyposis;not provided germline;unknown 1 45331676 GGGGCCCTTGGGGCCCAAATTCTGCTGGTGCAGAGGCCCAACTCAGGTACCTGGATACTGG 199422301 38855 NM_198253.2(TERT):c.2431C>T (p.Arg811Cys) TERT May 10, 2012 MedGen:C1857144,OMIM:224230;MedGen:C3151444 Dyskeratosis congenita autosomal recessive 1;Dyskeratosis congenita, autosomal recessive, 4 germline 5 1271156 GCCAGCAGTGGCCTCTTCGACGTCTTCCTACGCTTCATGTGCCACCACGCCGTGCGCATCA 727504136 177069 NM_001165963.1(SCN1A):c.3733C>T (p.Arg1245Ter) SCN1A May 30, 2017 MedGen:C1858673,OMIM:604403;MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002;MedGen:CN517202 Generalized epilepsy with febrile seizures plus, type 2;Severe myoclonic epilepsy in infancy;not provided germline;inherited 2 166012255 TAGGCATTTGAAGATATATATATTGATCAGCGAAAGACGATTAAGACGATGTTGGAATATG 374052333 260381 NM_024818.4(UBA5):c.562C>T (p.Arg188Ter) UBA5 Oct 06, 2016 MedGen:C4310700,OMIM:617132 Epileptic encephalopathy, early infantile, 44 germline 3 132671032 GTTCTTAGCTGTGTGGACAATTTTGAAGCTCGAATGACAATAAATACAGTGAGTATTCCTG 72653788 426949 NM_001171.5(ABCC6):c.2278C>T (p.Arg760Trp) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16178935 GGCATGAATCTCTCCGGAGGCCAGAAGCAGCGGCTGAGCCTGGCCCGGGCTGTATACAGAA 80356866 69689 NM_007294.3(BRCA1):c.3841C>T (p.Gln1281Ter) BRCA1 May 01, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline 17 43091690 AGTAACCAGGTAATATTGGCAAAGGCATCTCAGGAACATCACCTTAGTGAGGAAACAAAAT 397514579 48355 NM_145239.2(PRRT2):c.748C>T (p.Gln250Ter) PRRT2 Dec 13, 2012 MedGen:C1868682,OMIM:128200;Gene:81865,MedGen:C1853995,OMIM:605751 Dystonia 10;Seizures, benign familial infantile, 2 germline 16 29813802 CGAGGTAGCCTGAGCCGCCACCCCAGCTCCCAGTTGGCAGGTCCTGGGGTGGAGGGGGGTG 772083375 359125 NM_176869.2(PPA2):c.182C>T (p.Ser61Phe) PPA2 Nov 23, 2016 MedGen:C4310664,OMIM:617222 Sudden cardiac failure, infantile germline 4 105456721 TTGCAGAGAATGTAACTGGTCACTACATTTCCCCCTTTCATGATATTCCTCTGAAGGTGAA 193919338 19009 NM_015120.4(ALMS1):c.8383C>T (p.Gln2795Ter) ALMS1 May 01, 2002 MedGen:C0268425,OMIM:203800,Orphanet:ORPHA64,SNOMED CT:63702009 Alstrom syndrome germline 2 73490339 GAAGTGACTATTTTAGCAGAAGGTAGAAGGCAAAGCCAAAAATTACCTGTTGATTTTGAGC 104893775 28067 NM_000539.3(RHO):c.403C>T (p.Arg135Trp) RHO May 13, 2015 Human Phenotype Ontology:HP:0000547,MeSH:D012174,MedGen:C0035334,OMIM:268000,Orphanet:ORPHA791,SNOMED CT:28835009;MedGen:C3151001,OMIM:613731;MedGen:C1405854;MedGen:CN517202 Retinitis pigmentosa;Retinitis pigmentosa 4;Retinitis punctata albescens;not provided germline 3 129530917 CTGTGGTCCTTGGTGGTCCTGGCCATCGAGCGGTACGTGGTGGTGTGTAAGCCCATGAGCA 121909592 32079 NM_001737.4(C9):c.346C>T (p.Arg116Ter) C9 Mar 01, 2003 MedGen:C3151189,OMIM:613825 Complement component 9 deficiency germline 5 39341276 ATTTTGATTGCAGGCAGATGCATAAAGATGCGACTTCGGTGTAATGGTGACAATGACTGCG 113994131 34068 NM_000642.2(AGL):c.3682C>T (p.Arg1228Ter) AGL Jun 13, 2014 MedGen:C0017922,OMIM:232400,Orphanet:ORPHA308684,SNOMED CT:66937008 Glycogen storage disease type III germline 1 99902776 CGAGAAAGGAATGCTGGTCCCCAGATAGATCGAAACATGAAGGACGAAGGTACAGAACTTT 1057519454 362149 NM_015160.2(PMPCA):c.64C>T (p.Arg22Trp) PMPCA - MedGen:C1859298,OMIM:213200,Orphanet:ORPHA1170 Spinocerebellar ataxia, autosomal recessive 2 germline 9 136410732 CTGCGGGGCTCGGGTTCTTGGGGCTGTTCGCGGCTGAGGTGAGCCAAAGGCGAACCAGGCT 61750844 200770 NM_019074.3(DLL4):c.1672C>T (p.Arg558Ter) DLL4 Aug 19, 2015 MedGen:C0265268,Orphanet:ORPHA974,SNOMED CT:34748004;MedGen:C4225271,OMIM:616589 Adams-Oliver syndrome;Adams-Oliver syndrome 6 germline;paternal 15 40936659 GTGGCAGTGGCTGTGCGGCAGCTGCGGCTTCGACGGCCGGACGACGGCAGCAGGGAAGCCA 1057519075 359060 NM_002444.2(MSN):c.1657C>T (p.Arg553Ter) MSN Dec 20, 2016 MedGen:C4310812,OMIM:300988 Immunodeficiency 50 germline X 65739816 ATGATCCATGCTGAGAACATGCGACTGGGCCGAGACAAATACAAGACCCTGCGCCAGATCC 398122361 94417 NM_001080976.2(DSE):c.803C>T (p.Ser268Leu) DSE Nov 22, 2013 MedGen:C3809845,OMIM:615539 Ehlers-Danlos syndrome, musculocontractural type 2 germline 6 116431086 GAGTTGCGTATGGCAGCTACACCACTAGATCACTCTTCCAATACATGTTTCTCGTCCAGAG 879255241 75109 NM_001478.4(B4GALNT1):c.358C>T (p.Gln120Ter) B4GALNT1 Jul 11, 2013 MedGen:C1836632,OMIM:609195,Orphanet:ORPHA101006 Spastic paraplegia 26 germline 12 57631225 GAGCTGAGGGCTGCCTCTGCCACAAGAGAGCAGGAGTTCCAGGCCTTTCTGTCGAGGTACC 587784412 170145 NM_006306.3(SMC1A):c.2368C>T (p.Arg790Trp) SMC1A May 01, 2014 MedGen:C1802395,OMIM:300590,SNOMED CT:55016009 Congenital muscular hypertrophy-cerebral syndrome germline X 53403618 TTTTGTCGGGAGATTGGTGTGCGCAACATCCGGGAGTTTGAGGAAGAAAAGGTGAAACGGC 587781592 150945 NM_007194.3(CHEK2):c.151C>T (p.Gln51Ter) CHEK2 May 22, 2015 MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C0027672,SNOMED CT:699346009 Familial cancer of breast;Hereditary cancer-predisposing syndrome germline 22 28734571 TCCTCTACCAGCACGATGCCAAACTCCAGCCAGTCCTCTCACTCCAGCTCTGGGACACTGA 128625230 26259 NM_004006.2(DMD):c.6955C>T (p.Gln2319Ter) DMD Sep 01, 1992 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Duchenne muscular dystrophy germline X 31875331 TTACCTGAGAAACAAGGAGAAATTGAAGCTCAAATAAAAGACCTTGGGCAGCTTGAAAAAA 28989181 21800 NM_001211.5(BUB1B):c.2530C>T (p.Leu844Phe) BUB1B Jul 27, 2015 MedGen:CN031748,OMIM:257300;MedGen:C1864389,OMIM:176430 Mosaic variegated aneuploidy syndrome 1;Premature chromatid separation trait germline 15 40212643 GTTTGGCACCAATATATAAACTGCTTCACCCTTCAGGTCTGTAATACTAAAAACATAATTT -1 443485 NM_000094.3(COL7A1):c.409C>T (p.Arg137Ter) COL7A1 Aug 17, 2017 MedGen:CN517202 not provided germline 3 48593554 GCTGACCATGTCTTCCTGCCCCAGCTGGCCCGACCTGGTGTCCCCAAGGTGATCCCTACCC 587777368 132692 NM_022166.3(XYLT1):c.439C>T (p.Arg147Ter) XYLT1 Mar 06, 2014 MedGen:C4014294,OMIM:615777 Desbuquois dysplasia 2 germline 16 17259462 TACTTTTCTCATCGGCCGAAAGAGAAAGTGCGAACAGACAGCAACAACGAGAACTCTGTCC 761865592 226413 NM_016213.4(TRIP4):c.832C>T (p.Arg278Ter) TRIP4 Aug 10, 2016 MedGen:C4225177,OMIM:616866 Spinal muscular atrophy with congenital bone fractures 1 germline 15 64409617 ATTACCATGTGTTCCCTTTTTCTCAGTATTCGAAGGACCCAAGTCATTGATGATGAGTCAG 878853138 237495 NM_022068.3(PIEZO2):c.6668C>T (p.Ser2223Leu) PIEZO2 Jun 04, 2014 MedGen:C1862472,OMIM:108145,Orphanet:ORPHA1154 Oculomelic amyoplasia de novo 18 10696257 AACACTCAGCAGCTGCAGACATCACCTCTTCACTGTCAGAGGACCAGGTCCCGGGGCCGTT 387907017 39755 NM_001199799.1(ILDR1):c.583C>T (p.Gln195Ter) ILDR1 Feb 11, 2011 MedGen:C1864818,OMIM:609646 Deafness, autosomal recessive 42 germline 3 122001371 ATTGGAGTGTGCTGGTGCCAGTGCTGTCCTCAGTATTGCTGCTGCTATATCCGCTGTCCCT 128624223 26344 NM_000033.3(ABCD1):c.1544C>T (p.Ser515Phe) ABCD1 Oct 01, 1994 MedGen:C0162309,OMIM:300100,Orphanet:ORPHA43,SNOMED CT:65389002 Adrenoleukodystrophy germline X 153740147 TCACAGGCCCCAATGGCTGCGGCAAGAGCTCCCTGTTCCGGATCCTGGGTGGGCTCTGGCC 397514526 48137 NM_001139.2(ALOX12B):c.340C>T (p.Arg114Trp) ALOX12B Oct 01, 2005 MedGen:C1855792,OMIM:242100 Autosomal recessive congenital ichthyosis 2 germline 17 8086028 TGGATGGATGGCTACGAGACCCTGGCACTCCGGGAGGCCACAGGTAAGCCCTCATCACCCT 121913120 31271 NM_000143.3(FH):c.301C>T (p.Arg101Ter) FH Jul 25, 2017 MedGen:C0342770,OMIM:606812,Orphanet:ORPHA24,SNOMED CT:237983002;MedGen:C0027672,SNOMED CT:699346009;Human Phenotype Ontology:HP:0007437,MedGen:C1708350,OMIM:150800,Orphanet:ORPHA523;MedGen:CN517202 Fumarase deficiency;Hereditary cancer-predisposing syndrome;Multiple cutaneous leiomyomas;not provided germline;unknown 1 241513680 CCAGTTATTAAAGCTTTTGGCATCTTGAAGCGAGCGGCCGCTGAAGTAAACCAGGATTATG 797045919 207984 NM_001029.4(RPS26):c.55C>T (p.Gln19Ter) RPS26 Apr 14, 2015 MedGen:C2750080,OMIM:613309 Diamond-Blackfan anemia 10 germline 12 56042476 GGTCGTGCCAAAAAGGGCCGCGGCCACGTGCAGCCTATTCGCTGCACTAACTGTGCCCGAT -1 478065 NM_000267.3(NF1):c.484C>T (p.Gln162Ter) NF1 Apr 04, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 17 31169895 AGTTAATTTTGGTTTTTACTTTTTAGGTTACAGGAATTAACTGTTTGTTCAGAAGACAATG 587783151 166536 NM_003159.2(CDKL5):c.1324C>T (p.Gln442Ter) CDKL5 Jan 15, 2014 MedGen:CN517202 not provided germline X 18604248 AAGTACCTCAAGTCAAACAGCAGATCTCAGCAGAACCGCCACTCATTCATGGAAAGCTCTC 80356541 34525 NM_021830.4(TWNK):c.1287C>T (p.Ala429=) TWNK Jul 22, 2010 MedGen:C1849096,OMIM:271245,Orphanet:ORPHA1186 Mitochondrial DNA depletion syndrome 7 (hepatocerebral type) not provided 10 100989687 TGGAAAGACGACATTCATCAGTGAGTATGCCCTGGATTTGTGTTCCCAGGGGGTGAACACA 886039263 259360 NM_001242896.1(DEPDC5):c.1759C>T (p.Arg587Ter) DEPDC5 Apr 13, 2016 Gene:50987,MedGen:C1858477,OMIM:604364 Epilepsy, familial focal, with variable foci 1 germline 22 31819114 GTTGGCAGTGCAGAATCCATGCTGCATGTTCGACCTGGTGGATACACGCCCCAGAGAGCAC 387906811 39158 NM_003073.4(SMARCB1):c.143C>T (p.Pro48Leu) SMARCB1 Feb 01, 2012 MedGen:C4048809,OMIM:162091 Schwannomatosis 1 unknown 22 23791805 TGTTCCGAGGTTCTCTGTACAAGAGATACCCCTCACTCTGGAGGCGACTAGCCACTGTGGA 121909035 22246 NM_000492.3(CFTR):c.2845C>T (p.His949Tyr) CFTR May 15, 1994 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline 7 117603719 CATACTCTAATCACAGTGTCGAAAATTTTACACCACAAAATGTTACATTCTGTTCTTCAAG 121918056 28554 NM_002693.2(POLG):c.679C>T (p.Arg227Trp) POLG Feb 02, 2017 MedGen:C3150914,OMIM:613662;MedGen:C0205710,OMIM:203700,Orphanet:ORPHA726,SNOMED CT:20415001;MedGen:CN517202 Mitochondrial DNA depletion syndrome 4B, MNGIE type;Progressive sclerosing poliodystrophy;not provided germline 15 89330257 ACCTCCCTCAGGTATTCCTGGTGCAGCCAGCGGCTGGTGGAAGAGCGTTACTCTTGGACCA 104894306 21942 NM_003002.3(SDHD):c.64C>T (p.Arg22Ter) SDHD Feb 04, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1868633,OMIM:168000;Human Phenotype Ontology:HP:0002666,MedGen:C0031511,OMIM:171300 Hereditary cancer-predisposing syndrome;Paragangliomas 1;Pheochromocytoma germline 11 112087868 CTAATGACTCTTTCCTCAGCTCTGTTGCTTCGAACTCCAGTGGTCAGACCTGCTCATATCT 113993986 34186 NM_002863.4(PYGL):c.2024C>T (p.Ser675Leu) PYGL May 17, 2011 MedGen:C0017925,OMIM:232700,Orphanet:ORPHA369,SNOMED CT:237971004,SNOMED CT:29291001 Glycogen storage disease, type VI not provided 14 50910048 AGCAGATTTCCACTGCAGGCACCGAAGCCTCGGGGACAGGCAATATGAAGTTCATGCTAAA 879253738 227436 NM_031942.4(CDCA7):c.1057C>T (p.Arg353Cys) CDCA7 Apr 21, 2016 MedGen:C4310799,OMIM:616910 Immunodeficiency-centromeric instability-facial anomalies syndrome 3 germline 2 173366304 TATTTGTAGGGCTCTACTTGTCATCAATGCCGTCAGAAGACTATTGATACCAAAACAAACT 201422931 445261 NM_000153.3(GALC):c.266C>T (p.Pro89Leu) GALC Nov 01, 2017 MedGen:CN517202 not provided germline 14 87988206 TATGTTAATACTGTTACTTCTTTTCACAGCCGAATTTTGGTGCCTCTTTGCATATTTTAAA -1 429140 NM_004523.3(KIF11):c.868C>T (p.Gln290Ter) KIF11 Mar 15, 2017 MedGen:C1835265,OMIM:152950,Orphanet:ORPHA2526 Microcephaly with or without chorioretinopathy, lymphedema, or mental retardation germline 10 92613455 AAGAGAGCTCGGGAAGCTGGAAATATAAATCAATCCCTGTTGACTTTGGGAAGGGTCATTA 137852482 25077 NM_000194.2(HPRT1):c.329C>T (p.Ser110Leu) HPRT1 Sep 26, 2017 na;MedGen:C0268117,OMIM:300323,Orphanet:ORPHA79233,SNOMED CT:238007004 HPRT LONDON;Partial hypoxanthine-guanine phosphoribosyltransferase deficiency germline X 134486475 TTTTTTTTTTTTTTAACTAGAATGACCAGTCAACAGGGGACATAAAAGTAATTGGTGGAGA 587776952 51085 NM_001305581.1(LRMDA):c.664C>T (p.Arg222Ter) LRMDA Apr 16, 2013 MedGen:C3808786,OMIM:615179 Albinism, oculocutaneous, type VII germline 10 76557271 GGGAAAAACTCAGAGGGCAACAGGTTTATCCGAGATGACCAGCTCTGAAGCCAACTTCTGT 121907917 18506 NM_000280.4(PAX6):c.718C>T (p.Arg240Ter) PAX6 Jun 20, 2017 MedGen:C0344542,OMIM:106210;MedGen:C0344542,OMIM:106210;Human Phenotype Ontology:HP:0000659,MedGen:C0344559,OMIM:604229,SNOMED CT:204153003;MedGen:CN517202 Aniridia 1;Aniridia 1;Irido-corneo-trabecular dysgenesis;not provided de novo;germline 11 31794079 GAGAGAACCCATTATCCAGATGTGTTTGCCCGAGAAAGACTAGCAGCCAAAATAGATCTAC 777006911 204975 NM_058004.3(PI4KA):c.2386C>T (p.Arg796Ter) PI4KA Jul 01, 2015 MedGen:C4225295,OMIM:616531 Polymicrogyria, perisylvian, with cerebellar hypoplasia and arthrogryposis germline 22 20765636 GAAGCTAAGCCTCGGTTACAGAAGCTCTTCCGAGACTTCTGGCTGTATTCCGTTCTGATGG -1 445013 NM_001844.4(COL2A1):c.905C>T (p.Ala302Val) COL2A1 Oct 10, 2017 MedGen:CN517202 not provided germline 12 47993828 ATCCAGGCCTGGACGGTGCTAAGGGAGAGGCGGGTGCTCCTGGTGTGAAGGTGAGAGGCCA 372896892 48441 NM_021939.3(FKBP10):c.1207C>T (p.Arg403Ter) FKBP10 Nov 22, 2011 MedGen:C3151433,OMIM:613849 Osteogenesis imperfecta type 12 germline 17 41820412 AATGAGACCACCAAGCTTGGGGACTTTGTTCGATACCATTACAACTGTTCTTTGCTGGACG 431905516 102923 NM_001044.4(SLC6A3):c.1561C>T (p.Arg521Trp) SLC6A3 Jan 01, 2011 MedGen:C2751067,OMIM:613135,Orphanet:ORPHA238455 Infantile Parkinsonism-dystonia germline 5 1406226 ATGACCGGGCAGCGGCCCAGCCTGTACTGGCGGCTGTGCTGGAAGCTGGTCAGCCCCTGCT 764575966 181600 NM_003001.3(SDHC):c.397C>T (p.Arg133Ter) SDHC Jul 25, 2017 MedGen:C1708353,Orphanet:ORPHA29072;MedGen:C0027672,SNOMED CT:699346009;MedGen:C1854336,OMIM:605373;MedGen:CN517202;MedGen:CN169374 Hereditary Paraganglioma-Pheochromocytoma Syndromes;Hereditary cancer-predisposing syndrome;Paragangliomas 3;not provided;not specified germline 1 161356832 CCTCTCATGTATCATACCTGGAATGGGATCCGACACTTGGTAAGTTAATTCGGGATTTGCA 765903345 248618 NM_015650.3(TRAF3IP1):c.463C>T (p.Arg155Ter) TRAF3IP1 Sep 06, 2016 MedGen:C4225263,OMIM:616629 Senior-Loken syndrome 9 germline 2 238328794 AGATCTCAGGAATTGGATAATAAGAATGTGCGAGAAGAAGAGTCCAGAGTTCACAAAAATA -1 432189 NM_000444.5(PHEX):c.2044C>T (p.Gln682Ter) PHEX Nov 06, 2013 MedGen:C0733682,OMIM:307800,Orphanet:ORPHA89936,SNOMED CT:82236004 Familial X-linked hypophosphatemic vitamin D refractory rickets germline X 22227585 CTTCTACCAGGCATCACATTCACCAACAACCAGCTCTTCTTCCTGAGTTATGCTCATGTGA 1131691627 421974 NM_001170629.1(CHD8):c.6103C>T (p.Arg2035Ter) CHD8 Oct 12, 2016 MedGen:C3554373,OMIM:615032;MedGen:CN517202 Autism, susceptibility to, 18;not provided de novo;germline 14 21393692 AAGCTAGAGCACGAGGTGGTGGCCAGGAGCCGACCAACCCCACAAGACTATGAGATGCGAG 1131692328 424561 NM_022455.4(NSD1):c.1549C>T (p.Gln517Ter) NSD1 Dec 02, 2016 MedGen:CN035106,OMIM:117550 Sotos syndrome 1 unknown 5 177209948 AAAAGGACTAGTGTGAAAAAGGGCCACATACAATTTGAAGCACATAAAGATGAACGGAGGG 120074191 18180 NM_000218.2(KCNQ1):c.350C>T (p.Pro117Leu) KCNQ1 Oct 20, 2001 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MedGen:C0035828,OMIM:192500,Orphanet:ORPHA101016,SNOMED CT:20852007 Congenital long QT syndrome;Long QT syndrome 1 germline 11 2445448 AGGGCCGCGTCTACAACTTCCTCGAGCGTCCCACCGGCTGGAAATGCTTCGTTTACCACTT 606231422 170958 NM_005214.4(CTLA4):c.208C>T (p.Arg70Trp) CTLA4 Oct 20, 2014 MedGen:C4015214,OMIM:616100,Orphanet:ORPHA436159 Autoimmune lymphoproliferatiVe syndrome, type V germline 2 203870684 TATGCATCTCCAGGCAAAGCCACTGAGGTCCGGGTGACAGTGCTTCGGCAGGCTGACAGCC 180177210 200482 NM_000030.2(AGXT):c.364C>T (p.Arg122Ter) AGXT Nov 27, 2014 MedGen:C0268164,OMIM:259900,Orphanet:ORPHA93598,SNOMED CT:65520001 Primary hyperoxaluria, type I germline 2 240870649 ACGGCCCACTCTGTCCTGCACCCAGGAGCCCGAGTGCACCCGATGACCAAGGACCCTGGAG 587783248 167678 NM_018136.4(ASPM):c.5233C>T (p.Arg1745Ter) ASPM Dec 07, 2012 MedGen:C1837501,OMIM:608716 Primary autosomal recessive microcephaly 5 germline 1 197104018 CTGCAAGCATTTGTTAGAGGATACCTTGTCCGAAAGCAGATGAGGTTACAAAGAAAAGCTG 759826138 272074 NM_000271.4(NPC1):c.2872C>T (p.Arg958Ter) NPC1 Jul 12, 2016 MedGen:C3179455,OMIM:257220 Niemann-Pick disease type C1 germline;unknown 18 23539394 GACTGGGTGAAGCCACAGTCGTCTTGCTGTCGAGTGGACAATATCACTGACCAGTTCTGCA 139073416 16326 NM_017837.3(PIGV):c.1022C>T (p.Ala341Val) PIGV Oct 01, 2010 MedGen:C1855923,OMIM:239300,Orphanet:ORPHA247262 Hyperphosphatasia with mental retardation syndrome 1 germline 1 26795056 CTGCACCAGTGGCTATACTGGTTGCCTGGGCAACTTGGACATACGTGACCACTCACCCTTG 121917861 23912 NM_002181.3(IHH):c.461C>T (p.Thr154Ile) IHH Jan 01, 2006 Human Phenotype Ontology:HP:0009371,MedGen:C1862151,OMIM:112500,Orphanet:ORPHA93388 Type A1 brachydactyly germline 2 219057549 TGCATTATGAGGGCCGCGCGGTGGACATCACCACATCAGACCGCGACCGCAATAAGTATGG 111033559 28675 NM_002667.4(PLN):c.25C>T (p.Arg9Cys) PLN Jun 02, 2017 MedGen:C1835928,OMIM:609909;EFO:EFO_0000407,Human Phenotype Ontology:HP:0001644,MedGen:C0007193,Orphanet:ORPHA217604,SNOMED CT:195021004;MedGen:CN517202 Dilated cardiomyopathy 1P;Primary dilated cardiomyopathy;not provided germline 6 118558946 GGTATCATGGAGAAAGTCCAATACCTCACTCGCTCAGCTATAAGAAGAGCCTCAACCATTG 80359234 67544 NM_000059.3(BRCA2):c.961C>T (p.Gln321Ter) BRCA2 Jun 26, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome germline 13 32332439 TGTTTTTCTAAATGTAGAACAAAAAATCTACAAAAAGTAAGAACTAGCAAGACTAGGAAAA 121908094 19313 NM_005857.4(ZMPSTE24):c.121C>T (p.Gln41Ter) ZMPSTE24 Jun 01, 2008 MedGen:C1837756,OMIM:608612,Orphanet:ORPHA90154;MedGen:CN517202 Mandibuloacral dysplasia with type B lipodystrophy;not provided germline 1 40258392 TATCTTTGGGAGACCTTCCTAGCACAGCGGCAGGTGAGCCTAGACAGGGTCCAACCTGACC -1 482145 NM_001288653.1(CLTC):c.781C>T (p.Gln261Ter) CLTC Dec 15, 2017 MedGen:CN517202 not provided germline 17 59651290 GCAGTGGATGTCTTCTTTCCTCCAGAAGCACAAAATGATTTTCCTGTTGCAATGCAGGTAT 371707778 70512 NM_001003800.1(BICD2):c.2108C>T (p.Thr703Met) BICD2 Apr 05, 2016 MedGen:C3809049,OMIM:615290,Orphanet:ORPHA363454;MedGen:CN517202 Spinal muscular atrophy, lower extremity predominant 2, autosomal dominant;not provided germline 9 92717947 CTTTTCCACCCTACACATCTGTCCCCCAGACGGCCGAGGTGGCCCTTGCCAACCTGAAGAG 137852925 18423 NM_001166136.1(EVC2):c.1615C>T (p.Gln539Ter) EVC2 Mar 01, 2003 MedGen:C0013903,OMIM:225500,Orphanet:ORPHA289,SNOMED CT:62501005 Chondroectodermal dysplasia germline 4 5628590 GTGCAGGGCCTTCTGAGCACCGCTGCAGCCCAGCTGACTCACCTCATTCAGAAGCACGAGA 779652673 414979 NM_001182.4(ALDH7A1):c.589C>T (p.Pro197Ser) ALDH7A1 Sep 25, 2017 MedGen:C1849508,OMIM:266100;MedGen:CN517202 Pyridoxine-dependent epilepsy;not provided germline 5 126577140 CTGGTTGGAATCATCACGGCATTCAATTTCCCTGTGGCAGTGTATGGTTGGAACAACGCCA 104895460 19734 NM_022162.2(NOD2):c.1405C>T (p.Leu469Phe) NOD2 Sep 01, 2001 MedGen:C1861303,OMIM:186580,Orphanet:ORPHA90340;MedGen:C1836122,OMIM:609464 Blau syndrome;Sarcoidosis, early-onset germline 16 50711316 CGCCATCATGAGCCCGGGGTGGCGGACCGCCTCATCCGCCTGCTCCAAGAGACCTCAGCCC 128620188 26384 NM_000061.2(BTK):c.43C>T (p.Gln15Ter) BTK Oct 01, 1994 MedGen:C0221026,OMIM:300755,Orphanet:ORPHA47,SNOMED CT:65880007 X-linked agammaglobulinemia germline X 101375242 ATTCTGGAGAGCATCTTTCTGAAGCGATCCCAACAGAAAAAGAAAACATCACCTCTAAACT 140853839 200239 NM_000017.3(ACADS):c.988C>T (p.Arg330Cys) ACADS May 24, 2017 MedGen:CN517202 not provided germline 12 120738874 GCCCTGGAGAGTGCCCGGCTGCTGACCTGGCGCGCTGCCATGCTGAAGGATAACAAGAAGC 778075842 430984 NM_014967.4(FAN1):c.1102C>T (p.Gln368Ter) FAN1 Sep 21, 2016 MedGen:C3553774,OMIM:614817,Orphanet:ORPHA401996 Interstitial nephritis, karyomegalic germline 15 30905765 GAGCAGGGGTCAAGCTGCAATGGTCCTGGTCAAACAACCGGTCATCCTTACTACCTTCGGA 773906955 235888 NM_002878.3(RAD51D):c.442C>T (p.Gln148Ter) RAD51D Oct 13, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 17 35107026 AATGGAGGGCTGACAGCTTCCCGCCTCCTCCAGCTGCTTCAGGCTAAAACCCAGGATGAGG 606231272 167422 NM_015559.2(SETBP1):c.1873C>T (p.Arg625Ter) SETBP1 Feb 09, 2016 MedGen:C4015141,OMIM:616078;MedGen:CN517202 Mental retardation, autosomal dominant 29;not provided germline 18 44951213 CGAGAGTTTCCTGGCACTAAGAAAAGAAAGCGACGACGCAATTTAGCGAAGTTGGCCCAGC 72648343 445819 NM_000088.3(COL1A1):c.1414C>T (p.Arg472Ter) COL1A1 Aug 01, 2017 MedGen:CN517202 not provided germline 17 50194768 CCTGCTGGAGAGGAAGGAAAGCGAGGAGCTCGAGGTGAACCCGGACCCACTGGCCTGCCCG 118203474 58292 NM_000368.4(TSC1):c.973C>T (p.Gln325Ter) TSC1 Feb 10, 2016 MedGen:C1854465,OMIM:191100;MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000;MedGen:CN517202 Tuberous sclerosis 1;Tuberous sclerosis syndrome;not provided germline 9 132911509 TCTCGGCTGATGTTGTTAAATATGCCAGGGCAGCTACCTCAGACTCTGAGTTCCCCATCGA 137852757 23831 NM_000227.4(LAMA3):c.1981C>T (p.Arg661Ter) LAMA3 Jun 15, 2017 MedGen:C0079683,OMIM:226700,Orphanet:ORPHA79404,SNOMED CT:400140006 Junctional epidermolysis bullosa gravis of Herlitz germline;unknown 18 23907639 GAAGTGATAGACACCAATCTCACAACTCTCCGAGATGGTCTTCATGGGATACAGAGAGGTC 760791287 265414 NM_001609.3(ACADSB):c.295C>T (p.Gln99Ter) ACADSB Dec 29, 2015 MedGen:C1864912,OMIM:610006,Orphanet:ORPHA79157,SNOMED CT:444838008 Deficiency of 2-methylbutyryl-CoA dehydrogenase germline 10 123037839 ATGGAGAAATCAGTAATACAAGGATTATTTCAACAAGGGGTACATTTCATAATTCTTCCAC -1 442116 NM_000435.2(NOTCH3):c.3016C>T (p.Arg1006Cys) NOTCH3 Jun 27, 2014 MedGen:CN517202 not provided germline 19 15180807 CCCCTCCAGACGCTGGTGGATTGGTGCAGCCGCCAGCCTTGTCAAAACGGGGGTCGCTGCG 1060501973 394916 NM_005732.3(RAD50):c.2569C>T (p.Gln857Ter) RAD50 Nov 08, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 5 132604850 GAATTGAATCGTAAGCTTATACAGGACCAGCAGGAACAGATTCAACATCTAAAAAGTACAA 121908051 18701 NM_000229.1(LCAT):c.101C>T (p.Pro34Leu) LCAT Jan 31, 1992 MedGen:C0342895,OMIM:136120,Orphanet:ORPHA79292,SNOMED CT:238092004 Fish-eye disease germline 16 67944001 CCTTCTGGCTCCTCAATGTGCTCTTCCCCCCGCACACCACGCCCAAGGCTGAGCTCAGTAA -1 481448 NM_001128834.2(PLP1):c.817C>T (p.Arg273Ter) PLP1 Oct 27, 2017 MedGen:C1839264,OMIM:312920,Orphanet:ORPHA99015 Spastic paraplegia 2 maternal X 103790581 TACAACTTTGCCGTCCTTAAACTCATGGGCCGAGGCACCAAGTTCTGATCCCCCGTAGAAA 886039981 261894 NM_007294.3(BRCA1):c.1918C>T (p.Gln640Ter) BRCA1 Oct 18, 2016 MedGen:C2676676,OMIM:604370 Breast-ovarian cancer, familial 1 germline 17 43093613 AATCTAAGCCCACCTAATTGTACTGAATTGCAAATTGATAGTTGTTCTAGCAGTGAAGAGA 727503983 177403 NM_003482.3(KMT2D):c.8488C>T (p.Arg2830Ter) KMT2D Dec 11, 2013 MedGen:CN030661,OMIM:147920 Kabuki syndrome 1 germline 12 49038868 CAACAACAGGCAACAGCAGCAACCTCCATGCGATTTGCCATGTCAGCTCGCTTTCCATCAA 886041843 264526 NM_001844.4(COL2A1):c.544C>T (p.Gln182Ter) COL2A1 Jun 28, 2016 MedGen:CN517202 not provided germline 12 47996613 TGTTGGGTTTCTTTGCAGAACTTTGCTGCCCAGATGGCTGGAGGATTTGATGAAAAGGCTG 139964066 237314 NM_000352.4(ABCC8):c.3640C>T (p.Arg1214Trp) ABCC8 Jan 12, 2017 MedGen:C3888018,Orphanet:ORPHA276525;MedGen:CN517202 Familial hyperinsulinism;not provided germline 11 17402671 GCCGAAACCGTAGAAGGACTCACCACCATCCGGGCCTTCAGGTACGAGTCCACATTCCCCC 61755783 28222 NM_000322.4(PRPH2):c.424C>T (p.Arg142Trp) PRPH2 Mar 17, 2014 MedGen:C2751290,OMIM:613105;MedGen:CN517202 Choroidal dystrophy, central areolar 2;not provided germline 6 42721911 CAAGGGCTCAAGAACGGCATGAAGTACTACCGGGACACAGACACCCCTGGCAGGTGTTTCA 119460972 17993 NM_000379.3(XDH):c.682C>T (p.Arg228Ter) XDH May 15, 1997 MedGen:C0268118,OMIM:278300,Orphanet:ORPHA93601,SNOMED CT:124147007 Deficiency of xanthine oxidase germline 2 31386525 AGGCTGAAAGACACTCCTCGGAAGCAGCTGCGATTTGAAGGGGAGCGTGTGACGTGGATAC 587780564 143271 NM_001376.4(DYNC1H1):c.1792C>T (p.Arg598Cys) DYNC1H1 Jun 21, 2017 MedGen:C0027888,Orphanet:ORPHA140450;MedGen:C1834690,OMIM:158600,Orphanet:ORPHA209341;MedGen:CN517202 Hereditary motor and sensory neuropathy;Spinal muscular atrophy, lower extremity predominant 1, autosomal dominant;not provided de novo;germline 14 101986017 TTTAATGCACTGTTTGTCAGGCCTCACATCCGTGGGGCCATTCGCGAATACCAGACCCAGC 537704873 440170 NM_001080463.1(DYNC2H1):c.7441C>T (p.Arg2481Ter) DYNC2H1 Jun 01, 2017 MedGen:C0265275,Orphanet:ORPHA474,SNOMED CT:75049004 Jeune thoracic dystrophy unknown 11 103191520 GATTGTTTACTGTATTTTCTTTTTCAGGTGCGAGCCAAATTTACAGTTGATGATTATAGTC 756210458 203843 NM_000026.3(ADSL):c.421C>T (p.Arg141Trp) ADSL Jun 22, 2015 Human Phenotype Ontology:HP:0003698,MedGen:C0241237;Human Phenotype Ontology:HP:0002123,MedGen:C4021759;Human Phenotype Ontology:HP:0002540,MedGen:C0560046;Human Phenotype Ontology:HP:0002344,MedGen:C1854838;Human Phenotype Ontology:HP:0011344,MedGen:C1854919;MedGen:CN517202 Difficulty standing;Generalized myoclonic seizures;Inability to walk;Progressive neurologic deterioration;Severe global developmental delay;not provided germline;unknown 22 40354266 TCTTTCTTGTAGCTTGCCAGAGTGATCTCTCGGCTTGCCGACTTTGCTAAGGAACGAGCCA 267606641 17053 NM_017651.4(AHI1):c.1765C>T (p.Arg589Ter) AHI1 Oct 19, 2017 MedGen:C1837713,OMIM:608629;MedGen:CN517202 Joubert syndrome 3;not provided germline 6 135447022 GAAGAGTCAAAGGAAGTAATAAAGTGGAAACGACTCCCTGGGCAGGTGAAGTGTTTGATAA 113994147 34078 NM_000920.3(PC):c.2540C>T (p.Ala847Val) PC Jul 21, 2011 MedGen:C0034341,OMIM:266150,SNOMED CT:87694001 Pyruvate carboxylase deficiency not provided 11 66850398 ACTGGGAGGGGGCTCGGGGACTGTACGCGGCCTTCGACTGCACGGCCACCATGAAGTCTGG 1057520507 378757 NM_000018.3(ACADVL):c.1843C>T (p.Arg615Ter) ACADVL Apr 24, 2017 MedGen:C3887523,OMIM:201475,Orphanet:ORPHA26793,SNOMED CT:237996001,SNOMED CT:237997005;MedGen:CN517202;MedGen:CN169374 Very long chain acyl-CoA dehydrogenase deficiency;not provided;not specified germline 17 7224972 CTTCCCTCTCCCCAGGCTGCAGCTCGGATCCGAGAGGGCATGGCCGCCCTGCAGTCTGACC 1057524638 375966 NM_001163809.1(WDR81):c.1564C>T (p.Gln522Ter) WDR81 Jan 05, 2017 MedGen:CN517202 not provided germline 17 1726523 CTGGATGTGCCAGCCTGGTGCAGCTCCAGCCAGGAGTTCGTAGCTGCCCACCGAGCCCTGC 267607555 77659 NM_170707.3(LMNA):c.1045C>T (p.Arg349Trp) LMNA Aug 17, 2015 MedGen:C1720860,OMIM:151660,Orphanet:ORPHA2348;MedGen:CN517202 Familial partial lipodystrophy 2;not provided germline 1 156136009 GCGGAAAAGGAGCGGGAGATGGCCGAGATGCGGGCAAGGATGCAGCAGCAGCTGGACGAGT 121434349 17050 NM_001134831.1(AHI1):c.1303C>T (p.Arg435Ter) AHI1 Sep 01, 2004 MedGen:C1837713,OMIM:608629 Joubert syndrome 3 germline 6 135455775 GTATTTAATGAAAATTTTCCCTATTTGCTTCGAGGCTCTGATGAGAGTCCTAAAGTCATCC 587782292 151901 NM_000051.3(ATM):c.9022C>T (p.Arg3008Cys) ATM May 03, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Ataxia-telangiectasia syndrome;Hereditary cancer-predisposing syndrome;not provided germline;unknown 11 108365359 ATTGACCAGAGTTTCAACAAAGTAGCTGAACGTGTCTTAATGAGACTACAAGAGAAACTGA 748979061 195599 NM_000843.3(GRM6):c.1462C>T (p.Gln488Ter) GRM6 Jan 20, 2015 MedGen:C1850362,OMIM:257270 Congenital stationary night blindness, type 1B germline 5 178986876 ACCAATGGCAGTGCCAGCAGTGGCGGGTACCAGGCAGTGGGCCAGTGGGCAGAGACCCTCA 763380940 260204 NM_017653.4(DYM):c.1504C>T (p.Gln502Ter) DYM Jul 04, 2017 MedGen:CN517202 not provided germline 18 49163744 CTGTCTAAAAAACACAACAAAGTTCTGGAACAAGCCACACAGTCCTTGAGAGGTTCGCTGA 104894269 21879 NM_005169.3(PHOX2A):c.215C>T (p.Ala72Val) PHOX2A Nov 01, 2001 MedGen:C1865915,OMIM:602078 Fibrosis of extraocular muscles, congenital, 2 germline 11 72243790 TACGCGACCACCAGCCCGCGCCCTACTCGGCAGGTGAGCGCAGCCCCGGCCCAACCCTCCC -1 354197 NM_013386.4(SLC25A24):c.649C>T (p.Arg217Cys) SLC25A24 Jan 26, 2018 MedGen:C2676780,OMIM:612289,SNOMED CT:205800003 Fontaine progeroid syndrome de novo;germline 1 108157482 GTCTCTCGAACAAGCACTGCCCCTTTGGACCGTCTGAAAATCATGATGCAGGTGAGCTTTA 201320564 417103 NM_019098.4(CNGB3):c.1432C>T (p.Arg478Ter) CNGB3 Mar 27, 2017 MedGen:C1849792,OMIM:262300 Achromatopsia 3 germline 8 86628967 AATTACTCCATTCCTAAACTTGTGCAAAAGCGAGTTCGGACTTGGTATGAATATACATGGG 74315293 23991 NM_000098.2(CPT2):c.1891C>T (p.Arg631Cys) CPT2 Dec 29, 2016 MedGen:C0342790,Orphanet:ORPHA157,SNOMED CT:238002005;MedGen:C1833511,OMIM:600649,Orphanet:ORPHA228305;MedGen:C1833508,OMIM:255110,Orphanet:ORPHA228302 Carnitine palmitoyltransferase II deficiency;Carnitine palmitoyltransferase II deficiency, infantile;Carnitine palmitoyltransferase II deficiency, myopathic, stress-induced germline 1 53213509 ATAGGCTGCAATGTCTCTTCCTACCCAGGCCGCAATGCCCGGGAGTTTCTCCAATGTGTGG 45477491 59249 NM_000548.4(TSC2):c.3442C>T (p.Gln1148Ter) TSC2 Feb 10, 2017 MedGen:C0751674,OMIM:606690,Orphanet:ORPHA538,SNOMED CT:73017001;MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000;MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000;MedGen:CN517202 Lymphangiomyomatosis;Tuberous sclerosis syndrome;Tuberous sclerosis syndrome;not provided germline 16 2080209 CGAGTTGGCGCCCTGGACGTGCCGGCCTCCCAGTTCCTGGGCAGTGCCACTTCTCCAGGAC 864622663 221614 NM_024577.3(SH3TC2):c.211C>T (p.Gln71Ter) SH3TC2 Oct 28, 2015 MedGen:CN043578 Charcot-Marie-Tooth disease, type IV germline 5 149047930 CGCTCCAGGAGGTGTGTAAATGGACCCCTACAGGAAGCTGCTCGGAGGCGGCTCTGGGCAC 587783070 166347 NM_018060.3(IARS2):c.2726C>T (p.Pro909Leu) IARS2 Nov 13, 2014 Human Phenotype Ontology:HP:0000518,MedGen:C1962983;MedGen:C4014942,OMIM:616007,Orphanet:ORPHA436174;Human Phenotype Ontology:HP:0009830,MedGen:C0442874;MedGen:CN220452;MedGen:CN220453 Cataract;Cataracts, growth hormone deficiency, sensory neuropathy, sensorineural hearing loss, and skeletal dysplasia;Peripheral neuropathy;growth hormone deficiency with short stature;partial sensorineural deafness germline 1 220143109 CTGAGTACAAGGTTATCACTGTGATAGAACCTGGACTGCTTTTTGAGATAATAGAGGTATG 369535598 150456 NM_012293.2(PXDN):c.1021C>T (p.Arg341Ter) PXDN Jun 18, 2014 MedGen:C3151617,OMIM:269400 Anterior segment dysgenesis 7 germline 2 1666484 ATTGAGAATTTCTGTTTAATTGTGACAGCTCGACCCACTTTTGTAATCCAGCCACAGAATA 28940876 18811 NM_000372.4(TYR):c.242C>T (p.Pro81Leu) TYR Nov 02, 2016 Human Phenotype Ontology:HP:0001022,MedGen:C0001916;MedGen:C1847024,OMIM:606952,Orphanet:ORPHA79434;MedGen:C0268494,OMIM:203100,Orphanet:ORPHA79431,SNOMED CT:6483008;MedGen:CN517202 Albinism;Oculocutaneous albinism type 1B;Tyrosinase-negative oculocutaneous albinism;not provided germline;unknown 11 89178195 TCACAGGGGTGGATGACCGGGAGTCGTGGCCTTCCGTCTTTTATAATAGGACCTGCCAGTG 62516060 15663 NM_000277.2(PAH):c.997C>T (p.Leu333Phe) PAH Jan 01, 1993 Human Phenotype Ontology:HP:0004923,MedGen:C0751435;MedGen:CN517202 Hyperphenylalaninemia, non-pku;not provided germline 12 102844404 CAGATTTACTGGTTTACTGTGGAGTTTGGGCTCTGCAAACAAGGAGACTCCATAAAGGCAT 876660802 233018 NM_000038.5(APC):c.1234C>T (p.Gln412Ter) APC Sep 21, 2015 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 5 112819266 CGTGAAATCCGAGTCCTTCATCTTTTGGAACAGATACGCGCTTACTGTGAAACCTGTTGGG 72551312 76775 NM_000784.3(CYP27A1):c.409C>T (p.Arg137Trp) CYP27A1 Aug 01, 2013 MedGen:C0238052,OMIM:213700,Orphanet:ORPHA909,SNOMED CT:63246000 Cholestanol storage disease not provided 2 218809730 CGGAACGACATGGAGCTATGGAAGGAGCACCGGGACCAGCACGACCTGACCTATGGGCCGT 879253824 224654 NM_000255.3(MUT):c.88C>T (p.Gln30Ter) MUT - MedGen:C1855114,OMIM:251000 Methylmalonic aciduria due to methylmalonyl-CoA mutase deficiency germline 6 49459379 AAAGAATCATCAGGCTCCAGGCTCATACAGCAACGACTTCTACACCAGCAACAGCCCCTTC 1064794020 406010 NM_003494.3(DYSF):c.5884C>T (p.Gln1962Ter) DYSF Aug 01, 2016 MedGen:C2931687,Orphanet:ORPHA207073;MedGen:CN517202 Dysferlinopathy;not provided germline 2 71679173 CACCCAGAATGGTTTGTGTCCCTTTTTGAGCAGAAAACAGTGAAGGGCTGGTGGCCCTGTG 1135401793 424679 NM_000489.4(ATRX):c.4865C>T (p.Ala1622Val) ATRX Jan 06, 2017 MedGen:C1845055,OMIM:301040,Orphanet:ORPHA847 ATR-X syndrome maternal X 77633657 TTTTGTGTGACAAACTGGATTTCAGCACGGCGTTAGTGGTTTGTCCTCTTAATACTGCTTT 796052002 200116 NM_000255.3(MUT):c.982C>T (p.Leu328Phe) MUT Feb 09, 2017 Human Phenotype Ontology:HP:0002912,MedGen:C0268583,SNOMED CT:42393006 Methylmalonic acidemia germline 6 49453686 GAAATAGCAAAGATGAGAGCTGGTAGAAGACTCTGGGCTCACTTAATAGAGAAAATGTTTC 748555538 272596 NM_014780.4(CUL7):c.4318C>T (p.Arg1440Ter) CUL7 Jun 15, 2016 MedGen:C1848862,OMIM:273750 Three M syndrome 1 germline 6 43038964 GGTCCAGGTCAGAGCCACCCTGCCCTTGAGCGAGGCTCACAGAGGCGACTGCAGTGGACGT 121908802 68685 NM_000492.3(CFTR):c.595C>T (p.His199Tyr) CFTR Jun 13, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline;unknown 7 117535263 GCTTTTATTTTCCAGGGACTTGCATTGGCACATTTCGTGTGGATCGCTCCTTTGCAAGTGG 137853055 22076 NM_004562.2(PRKN):c.931C>T (p.Gln311Ter) PRKN Sep 01, 2005 MedGen:C1868675,OMIM:600116 Parkinson disease 2 germline 6 161569357 CTCCATCACTTCAGGATTCTGGGAGAAGAGCAGGTGAGTGAGCATCTCAAAGGCTGCATCA 121909151 22820 NM_000288.3(PEX7):c.653C>T (p.Ala218Val) PEX7 Jun 14, 2015 MedGen:CN159238,OMIM:614879;MedGen:C1859133,OMIM:215100,Orphanet:ORPHA309789 Peroxisome biogenesis disorder 9B;Rhizomelic chondrodysplasia punctata type 1 germline;unknown 6 136869909 ATTGTTTTTAGAATTTGCTGGTGACCGGGGCGGTTGACTGTAGTTTGAGAGGCTGGGACTT 118192178 76889 NM_000540.2(RYR1):c.7522C>T (p.Arg2508Cys) RYR1 Dec 02, 2016 MedGen:C0751951,OMIM:117000,Orphanet:ORPHA597,SNOMED CT:43152001;MedGen:CN031421,OMIM:145600;MedGen:CN239331;MedGen:CN517202 Central core disease;Malignant hyperthermia, susceptibility to, 1;RYR1-Related Disorders;not provided germline;unknown 19 38500898 CACAAGGCGTCCATGGTGCTCTTCCTGGACCGTGTGTATGGCATCGAGAACCAGGACTTCT 782663655 260335 NM_004187.3(KDM5C):c.3880C>T (p.Gln1294Ter) KDM5C Aug 01, 2016 MedGen:CN517202 not provided germline X 53194297 AGGGCCATCAGCTGGCAAGGCCGCGCCAGGCAGGCTCTGGCCTCTGAAGATGTGACTGCTC 397515633 86134 NM_002608.3(PDGFB):c.445C>T (p.Arg149Ter) PDGFB Aug 14, 2017 MedGen:C3809645,OMIM:615483 Idiopathic basal ganglia calcification 5 germline 22 39231633 GTGCAGTGCCGCCCCACCCAGGTGCAGCTGCGACCTGTCCAGGTGCGTAGGCTCCGCGGCC 72554305 102997 NM_000531.5(OTC):c.106C>T (p.Gln36Ter) OTC - MedGen:CN517202 not provided unknown X 38367319 AGGTGTGGACAACCACTACAAAATAAAGTGCAGCTGAAGGGCCGTGACCTTCTCACTCTAA 121908428 20366 NM_133647.1(SLC12A6):c.2023C>T (p.Arg675Ter) SLC12A6 Aug 22, 2017 MedGen:C0795950,OMIM:218000,Orphanet:ORPHA1496 Andermann syndrome germline 15 34243993 ACATTACTTCGAACACCCAACTGGAGACCCCGATTCCGCTACTACCATTGGTAAGTCTGCT 398123160 98357 NM_000143.3(FH):c.1126C>T (p.Gln376Ter) FH Jan 17, 2017 Human Phenotype Ontology:HP:0007437,MedGen:C1708350,OMIM:150800,Orphanet:ORPHA523;MedGen:CN517202 Multiple cutaneous leiomyomas;not provided germline 1 241502553 GGTTTTCTTGAAGGCAAGGTGAACCCTACTCAGTGTGAAGCAATGACCATGGTTGCAGCCC 138775799 150541 NM_001128425.1(MUTYH):c.289C>T (p.Arg97Ter) MUTYH Jul 25, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1837991,OMIM:608456,Orphanet:ORPHA247798;MedGen:CN517202 Hereditary cancer-predisposing syndrome;MYH-associated polyposis;not provided germline 1 45333472 TTCAGAGACGTAGCTGAAGTCACAGCCTTCCGAGGGAGCCTGCTAAGCTGGTACGACCAAG 766315644 394729 NM_005732.3(RAD50):c.832C>T (p.Arg278Ter) RAD50 Mar 11, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 5 132587637 CTTGACAATGAAATTAAAGCCTTGGATAGCCGAAAGAAGCAAATGGAGAAAGATAATAGTG 587777695 165524 NM_020928.1(ZSWIM6):c.3487C>T (p.Arg1163Trp) ZSWIM6 Oct 31, 2017 MedGen:C1863616,OMIM:603671;MedGen:CN517202 Acromelic frontonasal dysostosis;not provided de novo;germline 5 61544156 ACGCACTCACGGCTCACACACATCAGTCCTCGGCACTATAGTGAGTTTATAGAGTTCCTCA 121913078 31541 NM_000043.5(FAS):c.361C>T (p.Arg121Trp) FAS Feb 01, 1997 MedGen:C1866119 Autoimmune lymphoproliferative syndrome, type 1a germline 10 89008915 CTAGGCTTAGAAGTGGAAATAAACTGCACCCGGACCCAGAATACCAAGTGCAGATGTAAAC 121964892 27258 NM_000490.4(AVP):c.20C>T (p.Pro7Leu) AVP Sep 01, 2004 MedGen:C4016430 Diabetes insipidus, neurohypophyseal, autosomal recessive germline 20 3084655 TGTGCACCAGGATGCCTGACACCATGCTGCCCGCCTGCTTCCTCGGCCTACTGGCCTTCTC 727504301 175133 NM_033056.3(PCDH15):c.1927C>T (p.Arg643Ter) PCDH15 Feb 10, 2014 MedGen:C1865885,OMIM:602083 Usher syndrome, type 1F germline 10 54090054 AATTATGTTTTCTCTCTGAAGGCAACTGATCGAGAGGGAGACTCAATAACATATGCCATTG 121912811 32557 NM_000781.2(CYP11A1):c.566C>T (p.Ala189Val) CYP11A1 Aug 01, 2002 MedGen:C3151055,OMIM:613743,Orphanet:ORPHA168558 Adrenal insufficiency, congenital, with 46,XY sex reversal, partial or complete germline 15 74345103 TCAGTGTCCTGCACAGGCGCATCAAGAAGGCGGGCTCCGGAAATTACTCGGGGGACATCAG 267606937 23812 NM_006204.3(PDE6C):c.826C>T (p.Arg276Ter) PDE6C Nov 17, 2009 MedGen:C2751309 Achromatopsia 5 germline 10 93622034 TACACGGTTAGATCATATCTGAACTGTGAACGATACTCCATTGGACTGCTGGACATGACCA 797044998 205005 NM_005097.3(LGI1):c.1420C>T (p.Arg474Ter) LGI1 Aug 27, 2015 MedGen:C1838062,OMIM:600512,Orphanet:ORPHA101046 Epilepsy, lateral temporal lobe, autosomal dominant germline 10 93797549 TCGTTCCAGGATATTCAGAGGATGCCATCGCGAGGATCCATGGTGTTCCAGCCTCTTCAAA 45517099 58900 NM_000548.4(TSC2):c.268C>T (p.Gln90Ter) TSC2 Jul 31, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Tuberous sclerosis syndrome;not provided germline 16 2053384 GCACTCTGGAAGGCGGTCGCGGATCTGTTGCAGCCGGAGCGGCCGCTGGAGGCCCGGCACG 121964894 15334 NM_000552.4(VWF):c.2446C>T (p.Arg816Trp) VWF May 01, 2010 MedGen:CN517202;MedGen:C1282975,Orphanet:ORPHA166093,SNOMED CT:359732009 not provided;von Willebrand disease type 2N germline 12 6036488 GAGGACTTTTGGATTCTTTTCTCTTAGGTCCGGCATGAGAACAGATGTGTGGCCCTGGAAA 63751108 16794 NM_000251.2(MSH2):c.1216C>T (p.Arg406Ter) MSH2 Sep 07, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0009405,Orphanet:ORPHA443090;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:C2936783,OMIM:120435;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Hereditary nonpolyposis colon cancer;Lynch syndrome;Lynch syndrome I;not provided germline;unknown 2 47429881 AGACAAGCAGCAAACTTACAAGATTGTTACCGACTCTATCAGGGTATAAATCAACTACCTA 876658631 234939 NM_000059.3(BRCA2):c.7516C>T (p.Gln2506Ter) BRCA2 Oct 18, 2016 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome germline 13 32356508 AAGAAGAAACAAAGGCAACGCGTCTTTCCACAGCCAGGCAGTCTGTATCTTGCAAAAACAT 118204026 16529 NM_001039141.2(TRIOBP):c.1039C>T (p.Arg347Ter) TRIOBP Jun 04, 2016 MedGen:C1853276,OMIM:609823 Deafness, autosomal recessive 28 germline 22 37723595 TGGAACACCCCCAGAGCTTCCTCTCCCTCACGAAGCACCCAACTGGATAACCCCAGAACCT 121912620 19541 NM_016180.4(SLC45A2):c.1457C>T (p.Ala486Val) SLC45A2 Feb 01, 2004 MedGen:C1847836,OMIM:606574,Orphanet:ORPHA79435 Oculocutaneous albinism type 4 germline 5 33944784 GCGCCACCCTCACATGCATGGTGCAGCTGGCTCAGATCCTGGTCGGAGGTGGCCTGGGCTT 121918527 25717 NM_031407.6(HUWE1):c.12559C>T (p.Arg4187Cys) HUWE1 Oct 31, 2017 MedGen:C2678046,OMIM:300706,Orphanet:ORPHA85328;MedGen:CN517202 Mental retardation, X-linked, syndromic, turner type;not provided germline X 53535474 TAGGTCCAAGAGTTTGGAGTTTGTGAAGTTCGTGACCTCAAACCCAATGGGGCCAACATCT 387907228 44205 NM_005691.3(ABCC9):c.3346C>T (p.Arg1116Cys) ABCC9 May 18, 2012 MedGen:C0795905,OMIM:239850,Orphanet:ORPHA1517 Hypertrichotic osteochondrodysplasia germline 12 21842441 CACATCCCTCCAACCTTGGAATCTCTAACTCGCTCAACACTGCTCTGCCTGTCTGCCATTG 1060500123 404499 NM_003611.2(OFD1):c.2725C>T (p.Arg909Ter) OFD1 Dec 19, 2016 Human Phenotype Ontology:HP:0002335,MedGen:C0431399,Orphanet:ORPHA475,SNOMED CT:253175003,SNOMED CT:716997004;MedGen:C1510460,OMIM:311200,Orphanet:ORPHA2750,SNOMED CT:52868006 Joubert syndrome;Oral-facial-digital syndrome germline X 13767252 AGTAACCTACAAGAAGTTTTAGAAAGGGAACGAAGAGAACTAGAAAAACTGTATCAGGAAA 267607400 77210 NM_000526.4(KRT14):c.1228C>T (p.Gln410Ter) KRT14 Sep 15, 2016 MedGen:CN517202 not provided germline 17 41583281 ATCCTGCTGGACGTGAAGACGCGGCTGGAGCAGGAGATCGCCACCTACCGCCGCCTGCTGG 61753979 153199 NM_004992.3(MECP2):c.1357C>T (p.Arg453Ter) MECP2 Feb 08, 2013 MedGen:C0035372,OMIM:312750,Orphanet:ORPHA778,SNOMED CT:68618008 Rett syndrome de novo;germline X 154030471 GCCGCCACGGCCGCAGAAAAGTACAAACACCGAGGGGAGGGAGAGCGCAAAGACATTGTTT 387907207 40608 NM_002049.3(GATA1):c.646C>T (p.Arg216Trp) GATA1 Apr 17, 2014 MedGen:C1839161,OMIM:314050,Orphanet:ORPHA231393 Thrombocytopenia, platelet dysfunction, hemolysis, and imbalanced globin synthesis germline X 48792370 AACTGCGGAGCAACAGCCACTCCACTGTGGCGGAGGGACAGGACAGGCCACTACCTATGCA 794728615 197564 NM_130799.2(MEN1):c.85C>T (p.Arg29Ter) MEN1 Oct 16, 2016 MedGen:C0027672,SNOMED CT:699346009;MeSH:D018761,MedGen:C0025267,OMIM:131100,Orphanet:ORPHA652,SNOMED CT:30664006 Hereditary cancer-predisposing syndrome;Multiple endocrine neoplasia, type 1 germline 11 64810025 GTGGTGCGCCTGTTTGCTGCCGAGCTGGGCCGAGAGGAGCCGGACCTGGTGCTCCTTTCCT 751030969 440146 NM_001080463.1(DYNC2H1):c.5087C>T (p.Thr1696Met) DYNC2H1 Jun 01, 2017 MedGen:C0265275,Orphanet:ORPHA474,SNOMED CT:75049004 Jeune thoracic dystrophy unknown 11 103170226 ATCCTTATGGACCAGCTGGAACTGGGAAAACGGAATCAGTAAAGGCTTTAGGTGGACTTCT 587778833 132298 NM_000321.2(RB1):c.1909C>T (p.Gln637Ter) RB1 Sep 16, 2013 Human Phenotype Ontology:HP:0009919,MeSH:D012175,MedGen:C0035335,OMIM:180200,Orphanet:ORPHA790 Retinoblastoma somatic 13 48456298 AATGCAGAGACACAAGCAACCTCAGCCTTCCAGACCCAGAAGCCATTGAAATCTACCTCTC 104894026 19519 NM_001002010.2(NT5C3A):c.646C>T (p.Gln216Ter) NT5C3A Jun 01, 2001 MedGen:C1849507,OMIM:266120,Orphanet:ORPHA35120 Uridine 5-prime monophosphate hydrolase deficiency, hemolytic anemia due to germline 7 33017501 ATCGGCGATGTACTAGAGGAAGTTATTCGTCAAGCTGGTGTTTATCATCCCAATGTCAAAG 587782695 152468 NM_002878.3(RAD51D):c.547C>T (p.Gln183Ter) RAD51D Jun 08, 2017 MedGen:C3280345,OMIM:614291;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 4;Hereditary cancer-predisposing syndrome germline 17 35106415 TTTGACATCTTCCAGATGCTGGATGTGCTGCAGGAGCTCCGAGGCACTGTGGCCCAGCAGG 373145711 39943 NM_015338.5(ASXL1):c.1210C>T (p.Arg404Ter) ASXL1 Jun 06, 2014 Human Phenotype Ontology:HP:0001273,MedGen:C1842581;MedGen:C0796232,OMIM:605039;Human Phenotype Ontology:HP:0002194,MedGen:C1837658;Human Phenotype Ontology:HP:0000750,MedGen:C0454644;MedGen:C0424605;Human Phenotype Ontology:HP:0011968,MedGen:C0232466;Human Phenotype Ontology:HP:0001076,MedGen:C1854408;Human Phenotype Ontology:HP:0001263,MedGen:C4020875;Human Phenotype Ontology:HP:0000998,MedGen:C0020555,Orphanet:ORPHA79365,SNOMED CT:29966009;Human Phenotype Ontology:HP:0010864,MedGen:C0036857;Human Phenotype Ontology:HP:0005487,MedGen:C1857949;Human Phenotype Ontology:HP:0001518,MedGen:C0021288;MedGen:CN239855 Abnormality of the corpus callosum;C-like syndrome;Delayed gross motor development;Delayed speech and language development;Developmental delay;Feeding difficulties;Glabellar hemangioma;Global developmental delay;Hypertrichosis;Intellectual disability, severe;Prominent metopic ridge;Small for gestational age;dystrophia germline;unknown 20 32433408 CGTATACAGCGTGGTCCAGCCACCCGACAGCGAGATGGGCATTTTAAGAAACGCTCTCGGC 281865468 40355 NM_001193466.1(KANSL1):c.916C>T (p.Gln306Ter) KANSL1 Nov 20, 2012 Gene:791085,MedGen:C1864871,OMIM:610443 Koolen-de Vries syndrome germline 17 46171228 AGCCGTGCCCGCAGATTACAAAAGCGCTTACAGGTTGTGCAAGCCAAGCAGGTTGAGAGGC 397515423 48371 NM_002633.2(PGM1):c.1507C>T (p.Arg503Ter) PGM1 Nov 08, 2012 MedGen:C2752015,OMIM:614921,Orphanet:ORPHA319646 Congenital disorder of glycosylation type 1t germline 1 63654374 ATTTTCACAGATGGTTCTCGAATCGTCTTCCGACTGAGCGGCACTGGGAGTGCCGGGGCCA 121909087 22353 NM_004560.3(ROR2):c.355C>T (p.Arg119Ter) ROR2 Dec 22, 2015 MedGen:C1849334,OMIM:268310,Orphanet:ORPHA1507;MedGen:CN517202 Robinow syndrome, autosomal recessive;not provided germline;unknown 9 91757380 ATCATCATCCGGAAGACAGAATATGGTTCACGACTGCGAATCCAGGACCTGGACACGACAG 104894020 22522 NM_001540.4(HSPB1):c.544C>T (p.Pro182Ser) HSPB1 Jan 01, 2005 MedGen:C2608087,OMIM:608634 Distal hereditary motor neuronopathy type 2B germline 7 76304099 CTAGCCACGCAGTCCAACGAGATCACCATCCCAGTCACCTTCGAGTCGCGGGCCCAGCTTG 794728537 197504 NM_000218.2(KCNQ1):c.1780C>T (p.Arg594Ter) KCNQ1 Jan 11, 2016 MedGen:CN517202 not provided germline 11 2778023 GGCAGCAACACGATCGGCGCCCGCCTGAACCGAGTAGAAGACAAGGTAGGCTCACGCGCCG 104894168 16874 NM_016065.3(MRPS16):c.331C>T (p.Arg111Ter) MRPS16 Nov 01, 2004 MedGen:C1864843,OMIM:610498,Orphanet:ORPHA254920 Combined oxidative phosphorylation deficiency 2 germline 10 73250935 CCTATGATGATCACAAATGCTGAGAGACTGCGAAGGAAACGGGCACGTGAAGTCCTGTTAG 121912639 22552 NM_002496.3(NDUFS8):c.254C>T (p.Pro85Leu) NDUFS8 May 25, 2004 MedGen:C1838979,OMIM:252010 Mitochondrial complex I deficiency germline 11 68033165 TGTTCCGGGAACCGGCCACCATCAACTACCCGTTCGAGAAGGGCCCGCTGAGCCCTCGCTT 121918793 79561 NM_006920.4(SCN1A):c.5693C>T (p.Thr1898Ile) SCN1A May 01, 2017 MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002;MedGen:CN517202 Severe myoclonic epilepsy in infancy;not provided de novo;germline 2 165991549 CCAAGGTCTCCTATCAGCCAATCACTACTACTTTAAAACGAAAACAAGAGGAAGTATCTGC 749827445 224973 NM_173560.3(RFX6):c.2596C>T (p.Arg866Ter) RFX6 Mar 07, 2016 MedGen:C2748662,OMIM:615710,Orphanet:ORPHA293864 Mitchell-Riley syndrome germline 6 116928956 TACACAGACACATCATCTCCAGTTGCATGTCGAACTCCAGTCCTAGGTAAATTATTTTAGC 121907966 18954 NM_000520.5(HEXA):c.1495C>T (p.Arg499Cys) HEXA Sep 29, 2016 MedGen:CN068775;MedGen:C0039373,OMIM:272800,Orphanet:ORPHA845,SNOMED CT:111385000 Gm2-gangliosidosis, adult-onset;Tay-Sachs disease germline;unknown 15 72345477 TTGACATCTGACCTGACATTTGCCTATGAACGTTTGTCACACTTCCGCTGTGAATTGCTGA 137852361 25151 NM_000132.3(F8):c.5113C>T (p.Gln1705Ter) F8 Jan 01, 1990 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154928677 GATTTTGACATTTATGATGAGGATGAAAATCAGAGCCCCCGCAGCTTTCAAAAGAAAACAC -1 439623 NC_000006.12:g.99593164C>T - Sep 07, 2017 Gene:4167,MedGen:C0730294,OMIM:136550,Orphanet:ORPHA75327,SNOMED CT:312925009 North Carolina macular dystrophy germline 6 99593164 ATTATGTAACAGTTTGCTACAGGAAATTAACCCCAGAAGAGAGAAAAAACAATCACTGGAA 201253919 39192 NM_004153.3(ORC1):c.1996C>T (p.Arg666Trp) ORC1 Feb 27, 2011 MedGen:CN030358,OMIM:224690 Meier-Gorlin syndrome 1 germline 1 52383437 ATGGACCTGCCAGAGCGAATCATGATGAACCGGGTGTCCAGCCGACTGGTAGGTTCTAGGG 121913499 362770 NM_001282387.1(IDH1):c.394C>T (p.Arg132Cys) IDH1 May 31, 2016 Human Phenotype Ontology:HP:0004808,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:ORPHA519,SNOMED CT:17788007;Human Phenotype Ontology:HP:0030078,MeSH:C538231,MedGen:C0152013;MedGen:C0007112;MeSH:D003528,MedGen:C0010606;Human Phenotype Ontology:HP:0009592,MeSH:D001254,MedGen:C0004114,Orphanet:ORPHA94,SNOMED CT:38713004;Human Phenotype Ontology:HP:0010796,MedGen:C0677865;MeSH:D015179,MedGen:CN236642;Human Phenotype Ontology:HP:0100843,MeSH:D005909,MedGen:C0017636,SNOMED CT:63634009;MedGen:C2239176,OMIM:114550,Orphanet:ORPHA88673,SNOMED CT:187769009,SNOMED CT:25370001;MeSH:C562393,MedGen:C0151779,SNOMED CT:93655004;Human Phenotype Ontology:HP:0002885,MeSH:D008527,MedGen:C0025149,OMIM:155255,Orphanet:ORPHA616;Human Phenotype Ontology:HP:0006775,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:ORPHA29073,SNOMED CT:109989006,SNOMED CT:55921005;MeSH:D009190,MedGen:C0026986,OMIM:614286;Human Phenotype Ontology:HP:0030692,MeSH:D001932,MedGen:C0006118,SNOMED CT:126952004;Human Phenotype Ontology:HP:0100013,MeSH:D001943,MedGen:C1458155,Orphanet:ORPHA180250,SNOMED CT:126926005;Human Phenotype Ontology:HP:0006740,MedGen:C0279680 Acute myeloid leukemia;Adenocarcinoma of lung;Adenocarcinoma of prostate;Adenoid cystic carcinoma;Astrocytoma;Brainstem glioma;Colorectal Neoplasms;Glioblastoma;Hepatocellular carcinoma;Malignant melanoma of skin;Medulloblastoma;Multiple myeloma;Myelodysplastic syndrome;Neoplasm of brain;Neoplasm of the breast;Transitional cell carcinoma of the bladder somatic 2 208248389 AGTGGATGGGTAAAACCTATCATCATAGGTCGTCATGCTTATGGGGATCAAGTAAGTCATG 527236031 152912 NM_015937.5(PIGT):c.1342C>T (p.Arg448Trp) PIGT Apr 25, 2016 MedGen:C3809356,OMIM:615398,Orphanet:ORPHA369837 Multiple congenital anomalies-hypotonia-seizures syndrome 3 germline;inherited 20 45424323 TCAGTCACCAAGGTTTCCATCCAGTTTGAGCGGGCGCTGCTGAAGTGGACCGAGTACACGC -1 446292 NM_172107.3(KCNQ2):c.430C>T (p.Arg144Trp) KCNQ2 Oct 04, 2017 MedGen:CN517202 not provided germline 20 63445322 ATCGTGGTGTTTGGCGTGGAGTACTTCGTGCGGATCTGGGCCGCAGGCTGCTGCTGCCGGT 863223778 210202 NM_000192.3(TBX5):c.1126C>T (p.Gln376Ter) TBX5 Sep 11, 2015 MedGen:CN517202 not provided germline 12 114355963 GCCTCCTACAGGACAGAGTCGGCACAGCGGCAAGCTTGCATGTATGCCAGCTCTGCGCCCC 267606696 23548 NM_001127221.1(CACNA1A):c.5455C>T (p.Arg1819Ter) CACNA1A Jan 12, 2002 MedGen:C4016713 Episodic ataxia, type 2, and epilepsy germline 19 13230158 GTCATCATGGACAACTTTGAGTACCTCACCCGAGACTCCTCCATCCTGGGCCCCCACCACC 387907275 45750 NM_001197104.1(KMT2A):c.7144C>T (p.Arg2382Ter) KMT2A Feb 05, 2013 MedGen:C1854630,OMIM:605130,Orphanet:ORPHA319182 Wiedemann-Steiner syndrome germline 11 118503036 CACCTCCATTTGAGAGGGCAAAGGAATGATCGAGACCAACACACAGATTCTACCCAATCAG 1057520672 373840 NM_000051.3(ATM):c.8641C>T (p.Gln2881Ter) ATM Apr 27, 2015 MedGen:CN517202 not provided germline 11 108347335 AGACATGTACAGAATATCTTGATAAATGAGCAGTCAGCAGAACTTGTACATATAGATCTAG 371077728 150667 NM_005591.3(MRE11):c.1090C>T (p.Arg364Ter) MRE11 May 09, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 11 94467821 AATTCTCACCAGCCAGAGAAGCCTCTTGTACGACTGCGAGTAAGTCCTATTTATATAGATT 45580035 67431 NM_000059.3(BRCA2):c.9154C>T (p.Arg3052Trp) BRCA2 Nov 01, 2017 MedGen:C2676676,OMIM:604370;MedGen:C2675520,OMIM:612555;MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 1;Breast-ovarian cancer, familial 2;Familial cancer of breast;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline;unknown 13 32380043 GATGAAATTTTATTTCAGATTTACCAGCCACGGGAGCCCCTTCACTTCAGCAAATTTTTAG 1064793900 408520 NM_170665.3(ATP2A2):c.1429C>T (p.Gln477Ter) ATP2A2 Aug 06, 2015 MedGen:CN517202 not provided germline 12 110339290 CCATATTTGTTCCCTTTGTAGGTCATTAAACAGCTGATGAAAAAGGAATTCACTCTAGAGT 118203983 16397 NM_170740.1(ALDH5A1):c.1273C>T (p.Arg425Ter) ALDH5A1 Dec 01, 2003 MedGen:C0268631,OMIM:271980,Orphanet:ORPHA22,SNOMED CT:49748000 Succinate-semialdehyde dehydrogenase deficiency germline 6 24528057 AAAGGTGCCACCGTTGTGACAGGTGGAAAACGACACCAACTTGGAAAAAATTTCTTTGAGC 200693106 229579 NM_001277115.1(DNAH11):c.6244C>T (p.Arg2082Ter) DNAH11 Jan 07, 2016 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244 Ciliary dyskinesia germline 7 21702773 TCTGTCTTGGTTGTGGCTGGATCTCTGAAACGAGGAGATAAAAATAGACCCGAAGATCAGG 45517222 59293 NM_000548.4(TSC2):c.2251C>T (p.Arg751Ter) TSC2 Oct 06, 2017 MedGen:C1860707,OMIM:613254;MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000;MedGen:CN517202 Tuberous sclerosis 2;Tuberous sclerosis syndrome;not provided germline 16 2072879 CTTTCAGGCCCAAAGACACTGGAGCGGCTCCGAGGCGCCCCAGAAGGCTTCTCCAGAACTG 397517689 56466 NM_001267550.2(TTN):c.71602C>T (p.Arg23868Ter) TTN Jan 27, 2017 MedGen:C1858763,OMIM:604145;EFO:EFO_0000407,Human Phenotype Ontology:HP:0001644,MedGen:C0007193,Orphanet:ORPHA217604,SNOMED CT:195021004;MedGen:CN517202 Dilated cardiomyopathy 1G;Primary dilated cardiomyopathy;not provided germline 2 178574530 ATTTTAGGATATCATGTTGAAAGAAAAGAACGAAATGGTATTCTCTGGCAGACTGTGAGCA 62619935 132769 NM_000038.5(APC):c.646C>T (p.Arg216Ter) APC Jun 29, 2017 MedGen:CN240755;MedGen:C2713442,OMIM:175100;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Familial adenomatous polyposis;Familial adenomatous polyposis 1;Hereditary cancer-predisposing syndrome;not provided germline 5 112792446 TAACTAATTAGGTTTCTTGTTTTATTTTAGCGAAGAATAGCCAGAATTCAGCAAATCGAAA 137941190 359140 NM_014026.5(DCPS):c.947C>T (p.Thr316Met) DCPS Jul 10, 2015 MedGen:C4085595,OMIM:616459 AL-RAQAD SYNDROME germline 11 126345546 AGTGTGACCCTAGGCACTACCAGCAGCGCACGCTCACCTTCGCCCTCAGGGCTGACGACCC 28934908 26862 NM_004992.3(MECP2):c.419C>T (p.Ala140Val) MECP2 Jul 19, 2017 Human Phenotype Ontology:HP:0000494,MedGen:C0423110;Human Phenotype Ontology:HP:0000365,MedGen:C0018772;Human Phenotype Ontology:HP:0001249,MedGen:C1843367;MedGen:C1968550,OMIM:300055;Human Phenotype Ontology:HP:0000252,MedGen:C0424688;Human Phenotype Ontology:HP:0000347,MedGen:C0025990;Human Phenotype Ontology:HP:0001270,MedGen:C1854301;Human Phenotype Ontology:HP:0008897,MedGen:C1859778;MedGen:C0035372,OMIM:312750,Orphanet:ORPHA778,SNOMED CT:68618008;MedGen:C1968556,OMIM:300673,Orphanet:ORPHA209370;Human Phenotype Ontology:HP:0000402,MedGen:C0395837;MedGen:CN517202 Downslanted palpebral fissures;Hearing impairment;Intellectual disability;Mental retardation, X-linked, syndromic 13;Microcephaly;Micrognathia;Motor delay;Postnatal growth retardation;Rett syndrome;Severe neonatal-onset encephalopathy with microcephaly;Stenosis of the external auditory canal;not provided germline;unknown X 154031409 AAGCCTTTCGCTCTAAAGTGGAGTTGATTGCGTACTTCGAAAAGGTAGGCGACACATCCCT 121908566 20922 NM_005751.4(AKAP9):c.4709C>T (p.Ser1570Leu) AKAP9 Dec 26, 2007 MedGen:C2678483,OMIM:611820 Long QT syndrome 11 germline 7 92040690 TTTTACTATTAAAGATTCATGATGAGATTTCAGTGTCAAGCATGGATGCTTCTAGACAACT 750019452 186893 NM_000053.3(ATP7B):c.2804C>T (p.Thr935Met) ATP7B Dec 21, 2016 MedGen:C0019202,OMIM:277900,Orphanet:ORPHA905,SNOMED CT:88518009 Wilson disease germline;unknown 13 51949723 TCCCATTTATCATCATCATGTCAACTTTGACGTTGGTGGTATGGATTGTAATCGGTTTTAT 121908105 19290 NM_001080467.2(MYO5B):c.1966C>T (p.Arg656Cys) MYO5B Oct 01, 2008 MedGen:C0341306,OMIM:251850,Orphanet:ORPHA2290,SNOMED CT:235729009 Congenital microvillous atrophy germline 18 49936289 ACCCTGAATGCCACGACACCTCACTATGTCCGCTGCATCAAGCCCAACGATGAGAAGCTCC 373856119 48279 NM_015214.2(DDHD2):c.1546C>T (p.Arg516Ter) DDHD2 Jan 25, 2013 MedGen:C3539495,OMIM:615033,Orphanet:ORPHA320380 Spastic paraplegia 54, autosomal recessive germline 8 38252216 GGATCTCCCATTGGAATGTTCCTTACTGTCCGAGGACTAAAAAGAATTGATCCCAACTACA 118192175 28012 NM_000540.2(RYR1):c.6487C>T (p.Arg2163Cys) RYR1 Sep 18, 2015 MedGen:C0751951,OMIM:117000,Orphanet:ORPHA597,SNOMED CT:43152001;MedGen:CN031421,OMIM:145600;MedGen:CN517202 Central core disease;Malignant hyperthermia, susceptibility to, 1;not provided germline;unknown 19 38494564 ATGAGCCTGCTCGAGTGCCTCGGCCAGATCCGCTCGCTGCTCATCGTGCAGATGGGCCCCC 1039571136 377246 NM_001396.4(DYRK1A):c.932C>T (p.Ser311Phe) DYRK1A Jan 06, 2017 MedGen:C3279839,OMIM:614104,Orphanet:ORPHA464306;MedGen:CN517202 Mental retardation, autosomal dominant 7;not provided de novo;germline 21 37490442 GTGCAATCAAGATAGTTGACTTTGGCAGTTCTTGTCAGTTGGGGCAGAGGGTAAGTATTAT 121918548 20079 NM_015665.5(AAAS):c.1432C>T (p.Arg478Ter) AAAS May 10, 2017 MedGen:C0271742,OMIM:231550,Orphanet:ORPHA869,SNOMED CT:45414006;MedGen:CN517202 Glucocorticoid deficiency with achalasia;not provided germline 12 53307698 TTCCCTTCTCTGCAGGGCTGGTCCACAGGCCGAATTGCCCACATCCCGCTGTACTTTGTCA 114342808 152885 NM_201253.2(CRB1):c.1576C>T (p.Arg526Ter) CRB1 Nov 07, 2014 MedGen:C3151202,OMIM:613835;MedGen:C1838647,OMIM:600105 Leber congenital amaurosis 8;Retinitis pigmentosa 12 germline;unknown 1 197421404 ACTGTTCAGCCAATGGCTCTTCTACTTTTCCGAAGCAACAGGGATGTGTTTGTGAAGCTGG 948246694 411266 NM_000444.5(PHEX):c.670C>T (p.Gln224Ter) PHEX Feb 22, 2017 MedGen:CN517202 not provided germline X 22090435 TGCTTTCTGTTTTTGTTTTTACAGCTGGACCAAGCAACACTCTCCCTGGCCGTGAGGGAAG 74315349 20465 NM_021969.2(NR0B2):c.100C>T (p.Arg34Ter) NR0B2 Jan 16, 2001 MedGen:C4016893 Obesity, mild, early-onset germline 1 26913841 CTTCTGAGCTCCAGCCTCAAGGCTGTCCCCCGACCCCGTAGCCGCTGCCTATGTAGGCAGC 398124474 102249 NM_133433.3(NIPBL):c.8377C>T (p.Arg2793Ter) NIPBL Feb 08, 2013 MedGen:CN029798,OMIM:122470 Cornelia de Lange syndrome 1 germline 5 37064854 AAGCTGACTAATAAAGTTGTTCAGACTTTACGATCCCTGTATGCCGCCAAGGATGGGACTT 797045760 207231 NM_133433.3(NIPBL):c.4495C>T (p.Gln1499Ter) NIPBL Dec 05, 2014 MedGen:CN029798,OMIM:122470 Cornelia de Lange syndrome 1 germline 5 37010160 ATGGTTACAGCACTGGTTTTACAACTTATTCAGTGTGTGGTACACTTACCATCATCAGAGA -1 477634 NM_024675.3(PALB2):c.1675C>T (p.Gln559Ter) PALB2 Jun 21, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 16 23634871 CACAAATATCAGCACGAAAAATTATTTATTCAAGTGAAAGGTAAATCAAGATGTGTTTGAT 61755320 51184 NM_003119.3(SPG7):c.1529C>T (p.Ala510Val) SPG7 Sep 12, 2017 MedGen:C0037773,Orphanet:ORPHA685,SNOMED CT:39912006;MedGen:CN239433;MedGen:C1846564,OMIM:607259,Orphanet:ORPHA99013;MedGen:C1846564,OMIM:607259,Orphanet:ORPHA99013;MedGen:CN517202 Hereditary spastic paraplegia;Spastic Paraplegia, Recessive;Spastic paraplegia 7;Spastic paraplegia 7;not provided germline;inherited;maternal;paternal;unknown 16 89546737 AGTCCAGCACCTTTTACTCCCAGCGTCTGGCAGAGCTGACACCAGGATTCAGTGGTACGTT 770845480 243797 NM_004006.2(DMD):c.5506C>T (p.Gln1836Ter) DMD Dec 19, 2015 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Duchenne muscular dystrophy germline X 32346023 GAATTGTTGCAAAGAGGAGACAACTTACAACAAAGAATCACAGATGAGAGAAAGCGAGAGG 527236158 15244 NM_001194958.2(KCNJ18):c.1061C>T (p.Thr354Met) KCNJ18 Jul 31, 2014 MedGen:C0268446,OMIM:188580,Orphanet:ORPHA79102,SNOMED CT:30967002;MedGen:C2750473,OMIM:613239 Thyrotoxic periodic paralysis;Thyrotoxic periodic paralysis 2 germline 17 21703847 ACTTCCACAAGACCTATGAGGTGCCCTCTACGCCCCGCTGCAGTGCGAAGGATCTGGTAGA 1131691616 422499 NM_018684.3(ZC4H2):c.199C>T (p.Arg67Ter) ZC4H2 Apr 13, 2017 MedGen:CN517202 not provided germline X 64921843 CAGGAGAAGATGGCCCATGTGGAGGAACTCCGACTGATCCACGCTGACATCAATGTGGTAC 387906712 38908 NM_013444.3(UBQLN2):c.1525C>T (p.Pro509Ser) UBQLN2 Aug 21, 2011 MedGen:C3275459,OMIM:300857 Amyotrophic lateral sclerosis 15, with or without frontotemporal dementia germline X 56565398 GGCCCCATAGGCCCTATAGTCCCTTTTACCCCCATAGGCCCCATTGGGCCCATAGGACCCA 397514524 48127 NM_000359.2(TGM1):c.376C>T (p.Arg126Cys) TGM1 Jan 18, 2013 MedGen:C3536797,OMIM:242300 Autosomal recessive congenital ichthyosis 1 germline 14 24261827 GACTTGCTGAGCTCGCGCTCGGACCAGAACCGCCGAGAGCACCACACAGACGAGTATGAGT 151071780 36330 NM_000060.4(BTD):c.262C>T (p.Gln88Ter) BTD Dec 04, 2012 MedGen:C0220754,OMIM:253260,Orphanet:ORPHA79241,SNOMED CT:8808004 Biotinidase deficiency not provided 3 15635641 AGCCGCCAAGAGGCCTTGGAGCTCATGAACCAGAACCTTGACATCTATGAACAGCAAGTGA 121913047 31624 NM_000122.1(ERCC3):c.1273C>T (p.Arg425Ter) ERCC3 Nov 01, 2006 MedGen:C1970808,OMIM:610651 Xeroderma pigmentosum, complementation group b germline 2 127286772 CACACCACCAAAAGGTCCTGGGAGGCCGAGCGAGTCATGGAGTGGCTCAAGACCCAGGAGT 121434554 32190 NM_004369.3(COL6A3):c.1393C>T (p.Arg465Ter) COL6A3 Jun 01, 2002 MedGen:CN033863,OMIM:254090 Ullrich congenital muscular dystrophy 1 germline 2 237381419 GCACTGGGACTGGCCAACTTCAATGCCATCCGAGACTTCATTGCTAAAGTCATCCAGAGGC 587779646 107128 NM_000090.3(COL3A1):c.3496C>T (p.Arg1166Ter) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189008113 CATCCAGGTCCCATTGGACCACCAGGGCCTCGAGGTAACAGAGGTGAAAGAGGATCTGAGG 886039853 260672 NM_000050.4(ASS1):c.851C>T (p.Thr284Ile) ASS1 Sep 01, 2016 MedGen:C0175683,OMIM:215700,Orphanet:ORPHA187 Citrullinemia type I germline 9 130489345 GCCTGGAAAAATGGCTAGGTATCTACGAGACCCCAGCAGGCACCATCCTTTACCATGCTCA 387906683 38840 NM_001040142.1(SCN2A):c.304C>T (p.Arg102Ter) SCN2A Dec 13, 2017 MedGen:C3150987,OMIM:613721 Early infantile epileptic encephalopathy 11 de novo;germline 2 165297053 ATAGTATTGAATAAAGGGAAAGCAATCTCTCGATTCAGTGCCACCCCTGCCCTTTACATTT 387907284 45782 NM_005585.4(SMAD6):c.1244C>T (p.Pro415Leu) SMAD6 Apr 01, 2012 MedGen:C3542024,OMIM:614823 Aortic valve disease 2 germline 15 66781288 GCGGCGAGCACCCCATCTTCGTCAACTCCCCGACGCTGGACGCGCCCGGCGGCCGCGCCCT 146686141 481565 NM_002016.1(FLG):c.4420C>T (p.Arg1474Ter) FLG Nov 15, 2017 MedGen:CN517202 not provided germline 1 152310466 GGAAGACAAGGATCCCGCCATGAGCAGGCACGAAACAGCTCTAGGCACTCAGCATCCCAAG 1064796879 411366 NM_003688.3(CASK):c.1480C>T (p.Gln494Ter) CASK Mar 16, 2017 na;MedGen:CN517202 CASK-Related Disorder;not provided germline;unknown X 41578363 AATGTGACCAGAGTTCGGCTGGTACAGTTTCAAAAGAACACAGATGAACCAATGGTAAGTA 370974124 231721 NM_000136.2(FANCC):c.1663C>T (p.Arg555Ter) FANCC Nov 21, 2016 MedGen:C3468041,OMIM:227645;MedGen:CN517202 Fanconi anemia, complementation group C;not provided germline;paternal 9 95101721 AAACTGGCCCGAGAGCTCCTTAAAGAGCTGCGAACTCAAGTCTAGAAGGCACGCAGGCCGT 183942200 442629 NM_002016.1(FLG):c.2362C>T (p.Arg788Ter) FLG Jul 18, 2017 MedGen:CN517202 not provided germline 1 152312524 TCCGCACGTGACCGGTCAGGGGAAAGGTCTCGACGTTCAGGGTCTTTCCTCTACCAGGTGA 121912425 29840 NM_002222.5(ITPR1):c.3176C>T (p.Pro1059Leu) ITPR1 Jun 12, 2014 MedGen:C1847725,OMIM:606658,Orphanet:ORPHA98769 Spinocerebellar ataxia 15 germline 3 4683472 TCCTGCTCCACTTGACGATGCATGACTACCCACCCCTGGTGTCAGGGGCCCTGCAGCTCCT -1 439157 NM_003482.3(KMT2D):c.15088C>T (p.Arg5030Cys) KMT2D Jul 19, 2017 MedGen:CN517202 not provided de novo 12 49026878 TTGCGACCTGACAAGGTACCGCGAGACATGCGTCGCTGCTGTTTCTGTCATGAGGAGGGTG 730881970 181053 NM_000455.4(STK11):c.409C>T (p.Gln137Ter) STK11 Sep 15, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 19 1219358 ATGGTGATGGAGTACTGCGTGTGTGGCATGCAGGAAATGCTGGACAGCGTGCCGGAGAAGC 786204798 187145 NM_015270.4(ADCY6):c.3346C>T (p.Arg1116Cys) ADCY6 May 01, 2014 MedGen:C4225385,OMIM:616287 Lethal congenital contracture syndrome 8 germline 12 48768972 ATCTGGGGGAACACAGTGAATGTCTCTAGTCGTATGGACAGCACGGGGGTCCCCGACCGAA 766503255 59387 NM_000419.4(ITGA2B):c.3076C>T (p.Arg1026Trp) ITGA2B May 03, 2013 MedGen:C1861195,OMIM:187800 Platelet-type bleeding disorder 16 germline 17 44372408 CCCGTGTACCCCCAGGTCGGCTTCTTCAAGCGGAACCGGCCACCCCTGGAAGAAGATGATG -1 481358 NM_080916.2(DGUOK):c.155C>T (p.Ser52Phe) DGUOK Nov 08, 2017 MedGen:C3151513,OMIM:251880,Orphanet:ORPHA279934 Mitochondrial DNA-depletion syndrome 3, hepatocerebral paternal 2 73938922 ATGCTATTTGCATTGCAGCTGTGGGAAAGTCCACGTTTGTGAAGTTACTCACGAAAACTTA 483352889 136643 NM_000271.4(NPC1):c.2128C>T (p.Gln710Ter) NPC1 - MedGen:C3179455,OMIM:257220 Niemann-Pick disease type C1 germline 18 23544346 GACAACATCTTCATTCTGGTGCAGGCCTACCAGGTATACTTCCATATTCTCACAGGGCTCA 74315386 23417 NM_000557.4(GDF5):c.901C>T (p.Arg301Ter) GDF5 Sep 01, 1997 Human Phenotype Ontology:HP:0009373,MedGen:C1862103,OMIM:113100,Orphanet:ORPHA93384 Type C brachydactyly germline 20 35434514 TGGGAGGTGTTCGACATCTGGAAGCTCTTCCGAAACTTTAAGAACTCGGCCCAGCTGTGCC 730881701 181116 NM_007194.3(CHEK2):c.409C>T (p.Arg137Ter) CHEK2 Sep 15, 2017 MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Familial cancer of breast;Hereditary cancer-predisposing syndrome;not provided germline 22 28725278 GAACCACTGCTGAAAAGAACAGATAAATACCGAACATACAGCAAGAAACACTTTCGGATTT 74315428 18367 NM_020436.4(SALL4):c.2713C>T (p.Arg905Ter) SALL4 Jan 15, 2015 MedGen:C1623209,OMIM:607323,Orphanet:ORPHA93293 Duane-radial ray syndrome germline 20 51788890 GAGAAGCCTTTTGTGTGCAACATTTGTGGGCGAGCTTTTACCACCAAAGGCAACTTAAAGG 113994135 33343 NM_139276.2(STAT3):c.1144C>T (p.Arg382Trp) STAT3 Apr 10, 2017 MedGen:C0022398,OMIM:147060,SNOMED CT:50926003;MedGen:CN517202 Hyperimmunoglobulin E syndrome;not provided germline 17 42329643 TAGTTGATTGTTCCCCTGTGATTCAGATCCCGGAAATTTAACATTCTGGGCACAAACACAA 387906595 38566 NM_001253823.1(BLVRA):c.52C>T (p.Arg18Ter) BLVRA Aug 01, 2009 MedGen:C3279964,OMIM:614156,Orphanet:ORPHA276405 Hyperbiliverdinemia germline 7 43787943 AAGTTTGGCGTGGTGGTGGTTGGTGTTGGCCGAGCCGGCTCCGTGCGGATGAGGGACTTGC 145221454 59856 NM_017563.4(IL17RD):c.1403C>T (p.Ser468Leu) IL17RD May 02, 2013 MedGen:C4016983 Hypogonadotropic hypogonadism 18 with anosmia germline 3 57098300 CCGAAAAGCTCCGCCAGGCCAAGCAGAGTTCGTCCGCGGCGCTCAGCAAGTTTATCGCCGT 121913657 29122 NM_002473.5(MYH9):c.287C>T (p.Ser96Leu) MYH9 May 28, 2016 MedGen:C1863659,OMIM:603622;MedGen:C0398641,OMIM:153650,SNOMED CT:234485006;MedGen:CN073381,Orphanet:ORPHA182050 Deafness, autosomal dominant nonsyndromic sensorineural 17;Epstein syndrome;MYH9 related disorders germline;paternal 22 36348950 TGGCAGAGCTCACGTGCCTCAACGAAGCCTCGGTGCTGCACAACCTCAAGGAGCGTTACTA 672601362 171780 NM_001244008.1(KIF1A):c.173C>T (p.Ser58Leu) KIF1A Mar 10, 2016 MedGen:C3280283,OMIM:614255 Mental retardation, autosomal dominant 9 de novo;germline 2 240789246 AAAGCTTCAGCTTTGACTACTCCTACTGGTCGCACACCTCAGTAAGCCGGGACCCCGGGTC 199614299 361950 NM_001282225.1(ADA2):c.145C>T (p.Arg49Trp) ADA2 Jan 13, 2017 MedGen:C0004943,OMIM:109650,Orphanet:ORPHA117,SNOMED CT:310701003 Behcet's syndrome germline 22 17209533 TTGAAAGAAAAGATGATGCGGCTGGGGGGGCGGCTGGTGCTGAACACCAAGGAGGAGCTGG 1085307639 415762 NM_004586.2(RPS6KA3):c.1894C>T (p.Arg632Ter) RPS6KA3 Apr 14, 2017 MedGen:CN517202 not provided germline X 20161709 CCTGATGATACACCAGAGGAAATATTGGCACGAATAGGTAGCGGAAAATTCTCACTCAGTG 121912739 32826 NM_003995.3(NPR2):c.1162C>T (p.Arg388Ter) NPR2 Jul 01, 2004 MedGen:C1864356,OMIM:602875,Orphanet:ORPHA40 Acromesomelic dysplasia Maroteaux type germline 9 35800427 GGGCTGGTTGTCATGGACAAGAACAATGACCGAGAGACTGACTTTGTCCTCTGGGCCATGG 587777459 143126 NM_001242896.1(DEPDC5):c.1459C>T (p.Arg487Ter) DEPDC5 Apr 13, 2016 Gene:50987,MedGen:C1858477,OMIM:604364 Epilepsy, familial focal, with variable foci 1 germline 22 31815005 TGTCTCTTGCCTGGCAGATCTGTGCGAGAGCGAGAGAGTCACAGTCGAAAGAGTGCCAGCT 770045897 264144 NM_005677.3(COLQ):c.679C>T (p.Arg227Ter) COLQ Sep 09, 2016 MedGen:CN517202 not provided germline 3 15470574 CCAAAAGGTGAACCTGGGATAGCAGGACACCGAGGACCCACAGGAAGACCAGGAAAACGAG 387906629 38664 NM_032638.4(GATA2):c.1192C>T (p.Arg398Trp) GATA2 Jun 14, 2016 Human Phenotype Ontology:HP:0004808,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:ORPHA519,SNOMED CT:17788007;MedGen:C3280030,OMIM:614172,Orphanet:ORPHA228423;MedGen:CN118027 Acute myeloid leukemia;Dendritic cell, monocyte, B lymphocyte, and natural killer lymphocyte deficiency;Leukemia, acute myeloid, susceptibility to germline;somatic 3 128481270 ATGAAGAAGGAAGGGATCCAGACTCGGAACCGGAAGATGTCCAACAAGTCCAAGAAGAGCA -1 446859 NM_004523.3(KIF11):c.2230C>T (p.Gln744Ter) KIF11 Dec 18, 2017 MedGen:C1835265,OMIM:152950,Orphanet:ORPHA2526 Microcephaly with or without chorioretinopathy, lymphedema, or mental retardation unknown 10 92639863 TGTGCTTTGGAGGAAAAGTGTGAAAATATACAGAAACCACTTAGTAGTGTCCAGGAAAATA 398124160 100985 NM_004463.2(FGD1):c.175C>T (p.Gln59Ter) FGD1 Oct 09, 2012 MedGen:C0175701,OMIM:305400,SNOMED CT:14921002 Aarskog syndrome germline X 54495258 GGTTCGGCTCTTGGCGGCCCACTGGATCCCCAGTTTGTCGGACCCTCGGACACCAGCCTGG 137852994 19999 NM_018136.4(ASPM):c.9178C>T (p.Gln3060Ter) ASPM May 04, 2015 MedGen:C1837501,OMIM:608716;MedGen:CN517202 Primary autosomal recessive microcephaly 5;not provided germline 1 197093168 CTTCGGCAGAAATCTGCTGCTTTGATCATACAAAAATATATACGAGCCAGGGAGGCTGGAA 762616589 362101 NM_015697.7(COQ2):c.905C>T (p.Ala302Val) COQ2 Jun 07, 2016 MedGen:CN229570,Orphanet:ORPHA35656 Coenzyme Q10 deficiency, primary germline 4 83269867 TGTGGACACTAATATATGATACTATTTATGCCCATCAGGTAAAGAAATTATCTTTTCTTAA 397514438 47165 NM_000060.4(BTD):c.758C>T (p.Pro253Leu) BTD Dec 04, 2012 MedGen:C0220754,OMIM:253260,Orphanet:ORPHA79241,SNOMED CT:8808004 Biotinidase deficiency not provided 3 15644614 TCACATGCTTTGATATATTGTTCTTTGACCCTGCCATCAGAGTCCTCAGAGACTACAAGGT 72554650 209263 NM_000052.6(ATP7A):c.2956C>T (p.Arg986Ter) ATP7A Feb 08, 2013 MedGen:C0022716,OMIM:309400,Orphanet:ORPHA565,SNOMED CT:59178007 Menkes kinky-hair syndrome germline X 78029289 AGAAGTATCTCCCGAACAGAAACGATAATACGATTTGCTTTCCAAGCCTCTATCACAGTTC 8192466 32735 NM_170731.4(BDNF):c.29C>T (p.Thr10Ile) BDNF Feb 01, 2002 MedGen:C1275808,OMIM:209880,Orphanet:ORPHA661,SNOMED CT:399040002 Congenital central hypoventilation germline 11 27658560 TACAGTTCCACCAGGTGAGAAGAGTGATGACCATCCTTTTCCTTACTATGGTTATTTCATA 104894930 24934 NM_000330.3(RS1):c.608C>T (p.Pro203Leu) RS1 Jun 09, 2016 MedGen:C0271091,OMIM:312700,Orphanet:ORPHA792,SNOMED CT:86923008;MedGen:CN517202 Juvenile retinoschisis;not provided germline;unknown X 18642071 CCATCATCTCCCGCTTCATCCGCCTCATCCCGCTGGGCTGGCACGTCCGCATTGCCATCCG 137853001 19970 NM_033056.3(PCDH15):c.7C>T (p.Arg3Ter) PCDH15 Jun 15, 2017 MedGen:C1865885,OMIM:602083 Usher syndrome, type 1F germline;unknown 10 54664256 GCTTTGAGTGAACTTTGACAGAAGATGTTTCGACAGTTTTATCTCTGGACATGTTTAGCTT 757013900 240043 NM_001277115.1(DNAH11):c.4621C>T (p.Arg1541Ter) DNAH11 Feb 01, 2016 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244 Ciliary dyskinesia germline 7 21635991 TTGGTCATCTTCACTTGGATGGAAGTCCAGCGAACTTGGTCTCACCTGGAAAGCATTTTTG 587783972 168441 NM_133433.3(NIPBL):c.5365C>T (p.Arg1789Ter) NIPBL Apr 18, 2014 MedGen:CN029798,OMIM:122470 Cornelia de Lange syndrome 1 germline 5 37022087 CGAGTTCTTGGTGAAAATGCAATTGCTGTTCGAACAAAAGCCATGAAGTGTTTGTCTGAGG 760798455 431711 NM_001142800.1(EYS):c.2620C>T (p.Gln874Ter) EYS Jan 01, 2015 Human Phenotype Ontology:HP:0000547,MeSH:D012174,MedGen:C0035334,OMIM:268000,Orphanet:ORPHA791,SNOMED CT:28835009 Retinitis pigmentosa unknown 6 64912505 TCAACATGCTTAGCTTTGGTAGACGCAAATCAGCATTGTATTTGTAGAGAAGGTAAGAGCT 398123028 70511 NM_001003800.1(BICD2):c.320C>T (p.Ser107Leu) BICD2 Jun 06, 2013 Human Phenotype Ontology:HP:0007269,MedGen:C0026847,SNOMED CT:5262007;MedGen:C3809049,OMIM:615290,Orphanet:ORPHA363454 Spinal muscular atrophy;Spinal muscular atrophy, lower extremity predominant 2, autosomal dominant de novo;germline 9 92729157 AGAGCCGGGAGGAGAGCCTGATCCAGGAGTCGGCCTCCAAGGAGCAGTACTACGTGCGGAA 765443042 264297 NM_183227.2(RAB23):c.82C>T (p.Arg28Ter) RAB23 Jun 19, 2017 MedGen:C1275078,OMIM:201000;MedGen:CN517202 Carpenter syndrome 1;not provided germline 6 57210299 GGAGCAGTTGGAAAATCAAGTATGATTCAGCGATATTGCAAAGGCATTTTTACAAAAGACT 775710800 384491 NM_033028.4(BBS4):c.883C>T (p.Arg295Ter) BBS4 - MedGen:C2936864,OMIM:615982 Bardet-Biedl syndrome 4 germline 15 72731573 TCTCTCTCATAGGCCATCAGCTGCCTGAAACGAGCCAACTACTTGGCACCCTTTGATTGGA 201908721 359234 NM_020247.4(COQ8A):c.895C>T (p.Arg299Trp) COQ8A Jun 07, 2016 MedGen:C2677589,OMIM:612016,Orphanet:ORPHA139485;MedGen:CN517202 Coenzyme Q10 deficiency, primary, 4;not provided germline 1 226982719 ATCAACCCCCACCTGGCTAAGATCTTCGAGCGGGTGCGGCAGAGCGCGGACTTCATGCCAC 1057519569 362373 NM_173494.1(PIH1D3):c.355C>T (p.Gln119Ter) PIH1D3 Feb 08, 2017 MedGen:CN240511,OMIM:300991 Ciliary dyskinesia, primary, 36, X-linked germline X 107222767 TTTTTCAGGTATGAGATTATATTCAGACAGCAGGTGGGAACTGAAGATATATTTTTAGGGT 80358248 27488 NM_152263.3(TPM3):c.94C>T (p.Gln32Ter) TPM3 Sep 18, 2014 MedGen:C1836448,OMIM:609284;MedGen:CN517202 Nemaline myopathy 1;not provided germline 1 154191925 CGGGCAGAGCAAGCTGAAGCTGAGCAGAAGCAGGCAGAAGAAAGAAGTAAACAGGTAGGCA 76554633 22240 NM_000492.3(CFTR):c.1654C>T (p.Gln552Ter) CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline;unknown 7 117587808 GGAGAAGGTGGAATCACACTGAGTGGAGGTCAACGAGCAAGAATTTCTTTAGCAAGGTGAA 113994035 19157 NM_001034116.1(EIF2B4):c.1120C>T (p.Arg374Cys) EIF2B4 Feb 01, 2002 MedGen:C1858991,OMIM:603896,Orphanet:ORPHA99854 Leukoencephalopathy with vanishing white matter germline 2 27366830 CGGCCATGGCTGGAAGGAAGGCACACACTACGTTCTCTAGTCCATGCTGGTGTCCCAGCCT 180177238 150265 NM_000030.2(AGXT):c.560C>T (p.Ser187Phe) AGXT Nov 27, 2014 MedGen:C0268164,OMIM:259900,Orphanet:ORPHA93598,SNOMED CT:65520001 Primary hyperoxaluria, type I germline 2 240873014 AGTGCCTGCTCCTGGTGGATTCGGTGGCATCCCTGGGCGGGACCCCCCTTTACATGGACCG 749282641 455119 NM_003060.3(SLC22A5):c.1411C>T (p.Arg471Cys) SLC22A5 Aug 08, 2017 MedGen:C0342788,OMIM:212140,Orphanet:ORPHA158,SNOMED CT:21764004 Renal carnitine transport defect germline 5 132392576 ATGGGTGTGGGAGTCAGCTCCACAGCATCCCGCCTGGGCAGCATCCTGTCTCCCTACTTCG 1057520720 376069 NM_004247.3(EFTUD2):c.1096C>T (p.Gln366Ter) EFTUD2 May 27, 2015 MedGen:CN517202 not provided germline 17 44867860 TTCACCAAAAAGGCCCCAACTAGCAGCTCCCAGAGAAGTTTCGTGGAGTTTATCTTGGAGC 869312917 226982 NM_006031.5(PCNT):c.2728C>T (p.Gln910Ter) PCNT Oct 24, 2013 MeSH:D030342,MedGen:C0950123 Inborn genetic diseases germline 21 46366702 GAGCTGCAGCTCCTCCAGGAGAGACACCAGCAGCAGCTCCTGTCAGTGACGGCGGAGCTCG 312262812 49516 NM_003611.2(OFD1):c.221C>T (p.Ser74Phe) OFD1 Feb 28, 2013 MedGen:C1510460,OMIM:311200,Orphanet:ORPHA2750,SNOMED CT:52868006 Oral-facial-digital syndrome not provided X 13736587 TAGAAGGGAGCTCCCTCTTAATAGGCGCCTCTAACTCTTTAGTGGCAGATCACTTACAAAG 569323391 465405 NM_198525.2(KIF7):c.157C>T (p.Arg53Ter) KIF7 May 16, 2017 Gene:46,MedGen:C0796147,OMIM:200990,Orphanet:ORPHA36 Acrocallosal syndrome, Schinzel type germline 15 89652774 GGGCTTGGCCGCGTCACTCTGGGCCGTGACCGACACTTTGGCTTCCACGTGGTGCTGGCCG 199469637 106417 NM_017415.2(KLHL3):c.430C>T (p.Gln144Ter) KLHL3 - Gene:7830,MedGen:C1449844,OMIM:145260,Orphanet:ORPHA757,SNOMED CT:15689008 Pseudohypoaldosteronism, type 2 germline 5 137692381 GATGTTCGGCAGAACTGCTGTGACTTCCTGCAGTCTCAGTTGCATCCCACCAATTGCCTGG 63750047 16797 NM_000251.2(MSH2):c.1801C>T (p.Gln601Ter) MSH2 Jul 28, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:C1321489,OMIM:158320,Orphanet:ORPHA587,SNOMED CT:403824007;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Lynch syndrome;Muir-Torré syndrome;not provided germline 2 47475066 CCAATGCAGACACTCAATGATGTGTTAGCTCAGCTAGATGCTGTTGTCAGCTTTGCTCACG 886037963 248902 NM_006545.4(NPRL2):c.100C>T (p.Arg34Ter) NPRL2 Sep 21, 2016 MedGen:C4310709,OMIM:617116 Epilepsy, familial focal, with variable foci 2 germline 3 50350001 CCTCCCCAGGTCCCTGAAGACTTCATCTCCCGAGAGCTGTTTGACACAGTCCAAGTGTACA 371812716 39800 NM_018718.2(CEP41):c.1078C>T (p.Arg360Cys) CEP41 Jan 15, 2012 MedGen:CN121474 Joubert syndrome 9/15, digenic germline 7 130398935 GGTGGCGGCCCCGCCAGCCACTCAAACCCCCGCTCCCTCAGCAGTGGTCACCTGCAAGGCA 886041701 265066 NM_001008537.2(NEXMIF):c.1441C>T (p.Arg481Ter) NEXMIF Sep 13, 2017 MedGen:C3806730,OMIM:300912,Orphanet:ORPHA85277;MedGen:CN517202 Mental retardation, X-linked 98;not provided germline X 74743116 AGCTCCTCCTCCCAACAGAACTATGGGCTGCGAGCCAAGAGAAAAGTCAGATACAGTGAAG 756101090 422802 NM_005560.4(LAMA5):c.3728C>T (p.Pro1243Leu) LAMA5 - MedGen:C1305904,SNOMED CT:399094007 Familial hematuria not applicable 20 62330867 TCCTCAGGGACTGCCAGGTGATCCCGCTGCCGCCCGGCCTCCCGCTGACCCACGCGCAGGA 147442301 39568 NM_000017.3(ACADS):c.164C>T (p.Pro55Leu) ACADS Jun 01, 2010 MedGen:C0342783,OMIM:201470,Orphanet:ORPHA26792,SNOMED CT:124166007 Deficiency of butyryl-CoA dehydrogenase germline 12 120727143 GCCGGGACTTTGCCGAGAAGGAGTTGTTTCCCATTGCAGCCCAGGTGGATAAGGAACATCT 397508072 67614 NM_000218.2(KCNQ1):c.1066C>T (p.Gln356Ter) KCNQ1 Mar 09, 2017 MeSH:D008133,MedGen:C0023976,SNOMED CT:9651007;MedGen:CN517202 Long QT syndrome;not provided germline 11 2585245 ATTCTTGGCTCGGGGTTTGCCCTGAAGGTGCAGCAGAAGCAGAGGCAGAAGCACTTCAACC 72659361 19989 NM_006371.4(CRTAP):c.826C>T (p.Gln276Ter) CRTAP Oct 01, 2012 MedGen:C1853162,OMIM:610682 Osteogenesis imperfecta type 7 germline 3 33129971 CATTATGTAGAAGTTCTGGAATGCAAAATACAGTGTGAAGAGAACCTCACCCCAGTTATAG 79987078 20832 NM_014270.4(SLC7A9):c.368C>T (p.Thr123Met) SLC7A9 Jun 01, 2007 Human Phenotype Ontology:HP:0003131,MedGen:C0010691,OMIM:220100,Orphanet:ORPHA214,SNOMED CT:85020001 Cystinuria germline 19 32864206 CCTGGGCCAGCCTGATCGTCATTAAGCCCACGTCCTTCGCCATCATCTGCCTCAGCTTCTC 397508097 67664 NM_000218.2(KCNQ1):c.1588C>T (p.Gln530Ter) KCNQ1 Aug 17, 2017 MedGen:C1837014,OMIM:607554;MedGen:C0004903,OMIM:130650,Orphanet:ORPHA116,SNOMED CT:81780002;MedGen:CN034131,OMIM:220400;MeSH:D008133,MedGen:C0023976,SNOMED CT:9651007;MedGen:C0035828,OMIM:192500,Orphanet:ORPHA101016,SNOMED CT:20852007;MedGen:C1865019,OMIM:609621;MedGen:CN517202 Atrial fibrillation, familial, 3;Beckwith-Wiedemann syndrome;Jervell and Lange-Nielsen syndrome 1;Long QT syndrome;Long QT syndrome 1;Short QT syndrome 2;not provided germline;unknown 11 2768917 ATGCAGTACTTTGTGGCCAAGAAGAAATTCCAGGTAAGCCCTGTGCTGAGCCTTCCTGCCC 377177061 131774 NM_001080522.2(CC2D2A):c.394C>T (p.Arg132Ter) CC2D2A Sep 16, 2013 MedGen:C0265215,Orphanet:ORPHA564,SNOMED CT:29076005 Meckel-Gruber syndrome germline 4 15502879 GAAATCCCCACTCCTCGGCCCAGACGCTTACGAAGTCCCAGTAAGAAAGAATTGGAGACTG 199422281 47897 NR_001566.1(TERC):n.323C>T TERC May 10, 2012 Human Phenotype Ontology:HP:0001915,MedGen:C0002874,OMIM:609135,SNOMED CT:306058006 Aplastic anemia not provided 3 169764738 CCACCGCGAAGAGTTGGGCTCTGTCAGCCGCGGGTCTCTCGGGGGCGAGGGCGAGGTTCAG 1060503287 394478 NM_000038.5(APC):c.2635C>T (p.Gln879Ter) APC Dec 05, 2016 MedGen:C2713442,OMIM:175100 Familial adenomatous polyposis 1 germline 5 112838229 AATCCAGGAACTTCTTCAAAGCGAGGTTTGCAGATCTCCACCACTGCAGCCCAGATTGCCA 150074056 223368 NM_000148.3(FUT1):c.349C>T (p.His117Tyr) FUT1 Feb 09, 2016 MedGen:C1859411 Para-Bombay phenotype germline 19 48750933 GGCCGCCGGGCCTTTATCCTGCCTGCCATGCATGCCGCCCTGGCCCCGGTATTCCGCATCA 74315441 31998 NM_000394.3(CRYAA):c.145C>T (p.Arg49Cys) CRYAA Oct 01, 2003 MedGen:C1858679,OMIM:604219 Cataract, autosomal dominant germline 21 43169244 TTCCTGTCGTCCACCATCAGCCCCTACTACCGCCAGTCCCTCTTCCGCACCGTGCTGGACT 763820204 260026 NM_015665.5(AAAS):c.1159C>T (p.Gln387Ter) AAAS Feb 29, 2016 MedGen:CN517202 not provided germline 12 53308457 ATTGTGGCAGATCTGTCTGAGACAACAATACAGACACCAGATGGTGAGGAGAGGTGAGCTG 397507215 46080 NM_007294.3(BRCA1):c.3352C>T (p.Gln1118Ter) BRCA1 Oct 03, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 1;Hereditary cancer-predisposing syndrome;not provided germline 17 43092179 ATAAAAAAGCAAGAATATGAAGAAGTAGTTCAGACTGTTAATACAGATTTCTCTCCATATC 797044512 178258 NM_000260.3(MYO7A):c.689C>T (p.Ala230Val) MYO7A Oct 12, 2016 MedGen:C1832475,OMIM:601317;MedGen:C1568247,OMIM:276900,Orphanet:ORPHA231169;MedGen:CN169374 Deafness, autosomal dominant 11;Usher syndrome, type 1;not specified germline 11 77156958 ACTTCAACAAGCGGGGCGCCATCGAGGGCGCGAAGATTGAGCAGTACCTGCTGGAAAAGTC 199472713 67759 NM_000218.2(KCNQ1):c.727C>T (p.Arg243Cys) KCNQ1 Jul 08, 2017 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MeSH:D008133,MedGen:C0023976,SNOMED CT:9651007;MedGen:CN517202 Congenital long QT syndrome;Long QT syndrome;not provided germline 11 2572056 CTGCAGATCCTGAGGATGCTACACGTCGACCGCCAGGGAGGCACCTGGAGGCTCCTGGGCT 137852753 23851 NM_001204.6(BMPR2):c.631C>T (p.Arg211Ter) BMPR2 Mar 03, 2017 MedGen:C0152171,OMIM:178600,SNOMED CT:26174007;MedGen:C1969342;MedGen:CN517202 Primary pulmonary hypertension;Pulmonary hypertension, primary, dexfenfluramine-associated;not provided germline 2 202518831 CTTTCTTTAAAACACTTGCAGCTGATTGGCCGAGGTCGATATGGAGCAGTATATAAAGGCT 397514663 48770 NM_002335.3(LRP5):c.1655C>T (p.Thr552Met) LRP5 Mar 14, 2013 MedGen:C0432252,OMIM:259770,Orphanet:ORPHA2788,SNOMED CT:254112001 Osteoporosis with pseudoglioma germline 11 68403553 AGGACAAGCTCCCGCACATTTTTGGGTTCACGCTGCTGGGGGACTTCATCTACTGGACTGA 267606777 17765 NM_177986.4(DSG4):c.865C>T (p.Arg289Ter) DSG4 Jun 01, 2006 MedGen:C1842839,OMIM:607903 Hypotrichosis 6 germline 18 31392200 GAAGAGAATTGTTTAAGTTCGGAACTGATACGATTACAAGCAATTGATCTTGATGAAGAAG 116840748 46870 NM_000168.5(GLI3):c.2110C>T (p.Gln704Ter) GLI3 Sep 13, 2012 MedGen:C0265220,OMIM:146510,Orphanet:ORPHA672,SNOMED CT:56677004 Pallister-Hall syndrome not provided 7 41967917 TTCCTTTCCACTTGACCCCAACAGACATCTCAGCCAAGCCCTGGTGGTCAGTCTTCATGCA 121912703 33101 NM_000789.3(ACE):c.3683C>T (p.Pro1228Leu) ACE Dec 23, 2003 MedGen:C1862874 Angiotensin i-converting enzyme, benign serum increase unknown 17 63496977 AGCTGGGCTGGCCGCAGTACAACTGGACGCCGAACTCCGGTACCGCCACCCACCCCACCTC 312262880 49502 NM_003611.2(OFD1):c.1420C>T (p.Gln474Ter) OFD1 Feb 28, 2013 MedGen:C1510460,OMIM:311200,Orphanet:ORPHA2750,SNOMED CT:52868006 Oral-facial-digital syndrome not provided X 13757668 TTTTTTTTTTTTACCTTCTTAGGCCTAGCTCAGCCGGCTCCTGAACTTGCAGTCTTTCAGA 796052802 203936 NM_001184880.1(PCDH19):c.619C>T (p.Arg207Ter) PCDH19 Aug 12, 2013 MedGen:CN517202 not provided germline X 100407979 GACCGCGAGACGCAGTCGCACTACAGCTTCCGAATCACTGCGCTAGACGGTGGCGACCCGC -1 473212 NM_000179.2(MSH6):c.3463C>T (p.Gln1155Ter) MSH6 Mar 30, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 2 47804934 TCACAGGCTGGCTTATTAGCTGTAATGGCCCAGATGGGTTGTTACGTCCCTGCTGAAGTGT 1054228594 459217 NM_014334.3(FRRS1L):c.874C>T (p.Arg292Ter) FRRS1L Jul 31, 2017 MedGen:C4310770,OMIM:616981 Epileptic encephalopathy, early infantile, 37 germline 9 109137616 TTCTCTTTTTTTCTTAAAGGCTCTATCACTCGACATGATATAGACTCACCGCCGGCTTCAG 121909257 23098 NM_005055.4(RAPSN):c.566C>T (p.Ala189Val) RAPSN Feb 01, 2008 MedGen:C1276035,OMIM:208150,SNOMED CT:401138005 Pena-Shokeir syndrome type I germline 11 47442780 ACGAGAAAGCCCTGTTCTTCCCCTGCAAGGCGGCAGAGCTTGTCAACAACTATGGCAAAGG 764893806 214832 NM_005689.3(ABCB6):c.1123C>T (p.Arg375Trp) ABCB6 Jan 01, 2013 Gene:541461,MedGen:C1836705,OMIM:609153,Orphanet:ORPHA90044 Pseudohyperkalemia, familial, 2, due to red cell leak germline 2 219216028 CGCACAGGGGAGGTGCTGCGGATCGCGGATCGGGGCACATCCAGTGTCACAGGGCTGCTCA 199422254 47544 NM_001363.4(DKC1):c.1223C>T (p.Thr408Ile) DKC1 May 28, 2015 MedGen:C1148551,OMIM:305000;MedGen:CN517202 Dyskeratosis congenita X-linked;not provided germline X 154774669 TGGACAAGCATGGGAAGCCCACAGACAGCACACCTGCCACCTGGAAGCAGGAGTATGTTGA 1057517541 358744 NM_000249.3(MLH1):c.1219C>T (p.Gln407Ter) MLH1 Aug 31, 2016 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:C1333991,OMIM:609310;MedGen:CN517202 Lynch syndrome;Lynch syndrome II;not provided germline;unknown 3 37025817 CTGCAGCCTCTGAGCAAACCCCTGTCCAGTCAGCCCCAGGCCATTGTCACAGAGGATAAGA 370691849 169789 NM_003560.3(PLA2G6):c.1612C>T (p.Arg538Cys) PLA2G6 Feb 08, 2013 Human Phenotype Ontology:HP:0012675,MedGen:C4021076 Iron accumulation in brain germline 22 38120889 TTGTTCCTAGGTAAGTCCATGGCCTACATGCGCGGCATGTACTTTCGCATGAAGGATGAGG 62638624 20881 NM_000843.3(GRM6):c.2122C>T (p.Gln708Ter) GRM6 Mar 29, 2005 MedGen:C1850362,OMIM:257270;MedGen:CN517202 Congenital stationary night blindness, type 1B;not provided germline 5 178986132 CTGGTCATCACCTTCAGCCTCACCTCCCTGCAGGTGGGTCCGTAGGCTCCCAAGGGCCAGG 79850223 22183 NM_000492.3(CFTR):c.3472C>T (p.Arg1158Ter) CFTR Jun 16, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008;MedGen:CN517202 Cystic fibrosis;not provided germline;unknown 7 117627525 ACAAAAATGTTGTTATTTTTATTTCAGATGCGATCTGTGAGCCGAGTCTTTAAGTTCATTG 61497286 77397 NM_002055.4(GFAP):c.731C>T (p.Ala244Val) GFAP Jan 08, 2015 MedGen:C0270726,OMIM:203450,Orphanet:ORPHA58,SNOMED CT:81854007;MedGen:CN517202 Alexander's disease;not provided germline 17 44913318 CCCTGAAAGAGATCCGCACGCAGTATGAGGCAATGGCGTCCAGCAACATGCATGAAGCCGA 763936813 270021 NM_004006.2(DMD):c.1594C>T (p.Gln532Ter) DMD Jan 15, 2016 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Duchenne muscular dystrophy germline X 32595765 GGAGATCACGCAACTGCTGCTTTGGAAGAACAACTTAAGGTCAGATTATTTTGCTTAGTAA 879254099 245189 NM_000166.5(GJB1):c.643C>T (p.Arg215Trp) GJB1 Nov 18, 2016 MedGen:CN517202 not provided germline X 71224350 AATGTGGCCGAGGTGGTGTACCTCATCATCCGGGCCTGTGCCCGCCGAGCCCAGCGCCGCT 587784262 169334 NM_000430.3(PAFAH1B1):c.37C>T (p.Arg13Ter) PAFAH1B1 Feb 08, 2013 MedGen:C1843916,OMIM:607432 Lissencephaly 1 germline 17 2665376 AGGAGTCATTTGAATTTTTCTTTCAGAAATCGAGCTATAGCAGATTATCTTCGTTCAAATG 118192143 76833 NM_000540.2(RYR1):c.14537C>T (p.Ala4846Val) RYR1 May 11, 2010 MedGen:C0751951,OMIM:117000,Orphanet:ORPHA597,SNOMED CT:43152001;MedGen:CN517202 Central core disease;not provided unknown 19 38580395 CCCAGCTGGTGATGACCGTGGGCCTTCTGGCGGTGGTCGTCTACCTGTACACCGTGGTGGC 28936368 24237 NM_000095.2(COMP):c.2152C>T (p.Arg718Trp) COMP Jul 25, 2013 MedGen:C1838280,OMIM:132400,Orphanet:ORPHA93308 Multiple epiphyseal dysplasia 1 germline 19 18783129 GACAGCAACGTGGTCTTGGACACAACCATGCGGGGTGGCCGCCTGGGGGTCTTCTGCTTCT 587777606 153583 NM_032667.6(BSCL2):c.793C>T (p.Arg265Ter) BSCL2 Dec 08, 2016 MedGen:C1720863,OMIM:269700;MedGen:C4014700,OMIM:615924,Orphanet:ORPHA363400 Congenital generalized lipodystrophy type 2;Encephalopathy, progressive, with or without lipodystrophy germline 11 62691300 ATGCAGTGGGTGTGGGGGGGCATCTGGCCCCGACACCGCTTCTCTTTGCAGGTCGAAAGGG 72551350 269522 NM_000463.2(UGT1A1):c.1069C>T (p.Gln357Ter) UGT1A1 Dec 18, 2015 MedGen:CN119421,Orphanet:ORPHA205 Crigler-Najjar syndrome germline 2 233767921 AACAACACGATACTTGTTAAGTGGCTACCCCAAAACGATCTGCTTGGTATGTTGGGCGGAT 121918144 15699 NM_000312.3(PROC):c.902C>T (p.Ala301Val) PROC Mar 01, 1992 MedGen:C2676759,OMIM:612304 Thrombophilia, hereditary, due to protein C deficiency, autosomal recessive germline 2 127428462 ACAGCAAGAGCACCACCGACAATGACATCGCACTGCTGCACCTGGCCCAGCCCGCCACCCT 886037875 247768 NM_013417.3(IARS):c.760C>T (p.Arg254Ter) IARS Aug 31, 2016 MedGen:C4310720,OMIM:617093 Growth retardation, intellectual developmental disorder, hypotonia, and hepatopathy germline 9 92278272 TTCCTTTTTCTCGTAGATGTTGCCAGAGGACGATTACTCATTTTAATGGAAGCCAGATTGT 267606725 33375 NM_005199.4(CHRNG):c.13C>T (p.Gln5Ter) CHRNG Aug 01, 2006 MedGen:C0265261,OMIM:265000,Orphanet:ORPHA294060 Multiple pterygium syndrome Escobar type germline 2 232539760 GCAGAGAGCTGAGGCACCATGCATGGGGGCCAGGGGCCGCTGCTCCTCCTGCTGCTGCTGG 144648002 224972 NM_173560.3(RFX6):c.2176C>T (p.Arg726Ter) RFX6 Mar 07, 2016 MedGen:C2748662,OMIM:615710,Orphanet:ORPHA293864 Mitchell-Riley syndrome germline 6 116927317 GGACTCTATCCTCATCACACCGAGCATGGTCGATGCATGGCTTGGACTGAACAGCAGCTTT 387906714 38916 NM_001143981.1(CHRDL1):c.652C>T (p.Arg218Ter) CHRDL1 Feb 10, 2012 MedGen:C0344530,OMIM:249300,OMIM:309300,Orphanet:ORPHA91489,SNOMED CT:268158009 Megalocornea germline X 110694289 CACCGCTCTCACTATGATCCTCCACCAAGCCGACAGGCTGGAGGTCTGTCCCGCTTTCCTG 121908644 21371 NM_000050.4(ASS1):c.256C>T (p.Arg86Cys) ASS1 Jun 05, 2017 MedGen:C0175683,OMIM:215700,Orphanet:ORPHA187 Citrullinemia type I germline 9 130458482 GCCATCCAGTCCAGCGCACTGTATGAGGACCGCTACCTCCTGGGCACCTCTCTTGCCAGGC 1060501458 395031 NM_001369.2(DNAH5):c.2533C>T (p.Gln845Ter) DNAH5 May 10, 2016 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244 Ciliary dyskinesia germline 5 13891020 ATGAGCAGCACGCCTCTTTGTCAGCTTCCCCAGGAGGAGCCACTAACCTGTGAAGAGTTTC 80358224 31222 NM_002353.2(TACSTD2):c.619C>T (p.Gln207Ter) TACSTD2 Apr 01, 1999 MedGen:C0339273,OMIM:204870,Orphanet:ORPHA98957,SNOMED CT:231928002,SNOMED CT:418946006 Lattice corneal dystrophy Type III germline 1 58576538 GAGCAGCCCACCATCCAGATCGAGCTGCGGCAGAACACGTCTCAGAAGGCCGCCGGTGACG 587777367 132691 NM_022166.3(XYLT1):c.1792C>T (p.Arg598Cys) XYLT1 Mar 06, 2014 MedGen:C4014294,OMIM:615777 Desbuquois dysplasia 2 germline 16 17134708 CAGCAGACAGCCCGGCCTACCTTCTTTGCCCGCAAGTTTGAAGCCGTGGTGAATCAGGAAA 797045673 208929 NM_000425.4(L1CAM):c.2278C>T (p.Arg760Ter) L1CAM Mar 27, 2017 MedGen:CN221283;MedGen:CN517202 Hydrocephalus due to aqueductal stenosis;not provided germline X 153866802 TACCGCGTGCAGTGGCGCCCTCAGGGGACACGAGGGCCCTGGCAGGAGCAGATTGTCAGCG 74315520 22441 NM_006941.3(SOX10):c.1129C>T (p.Gln377Ter) SOX10 Mar 01, 1999 MedGen:CN069053;MedGen:C2750452,OMIM:613266 Waardenburg syndrome type 2E, with neurologic involvement;Waardenburg syndrome type 4C germline 22 37973767 CCACACTACACCGACCAGCCATCCACCTCACAGATCGCCTACACCTCCCTCAGCCTGCCCC 80338762 20903 NM_006640.4(SEPT9):c.278C>T (p.Ser93Phe) SEPT9 Dec 06, 2012 MedGen:C1834304,OMIM:162100,Orphanet:ORPHA2901 Amyotrophy, hereditary neuralgic germline 17 77402314 CCGAGCCGGTGTCCCGGCGCACTGAGCTGTCCATTGACATCTCGTCCAAGCAGGTGGAGAA 1057519526 362318 NM_021007.2(SCN2A):c.2687C>T (p.Ala896Val) SCN2A Oct 25, 2017 MedGen:C3150987,OMIM:613721;Human Phenotype Ontology:HP:0200134,MedGen:C0543888 Early infantile epileptic encephalopathy 11;Epileptic encephalopathy de novo 2 165344679 TGGTATTGGCCATCATCGTCTTCATTTTTGCTGTGGTCGGCATGCAGCTCTTTGGTAAGAG -1 427190 NM_000179.2(MSH6):c.3940C>T (p.Gln1314Ter) MSH6 Dec 18, 2014 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Lynch syndrome germline 2 47806590 AGGCTTGCTAATCTCCCAGAGGAAGTTATTCAAAAGGGACATAGAAAAGCAAGAGAATTTG 759584387 203728 NM_172107.3(KCNQ2):c.1657C>T (p.Arg553Trp) KCNQ2 Feb 15, 2017 MedGen:C1852587,OMIM:121200;MedGen:C3150986,OMIM:613720,Orphanet:ORPHA439218;MedGen:CN517202 Benign familial neonatal seizures 1;Early infantile epileptic encephalopathy 7;not provided de novo;germline 20 63413556 TGCAGTGTCATGCGGTTCCTGGTGTCCAAGCGGAAGTTCAAGGAGAGCCTGCGGCCCTACG 61757582 21827 NM_001360.2(DHCR7):c.1210C>T (p.Arg404Cys) DHCR7 Jun 14, 2015 MedGen:C0175694,OMIM:270400,Orphanet:ORPHA818,SNOMED CT:43929004 Smith-Lemli-Opitz syndrome germline;unknown 11 71435593 CTGCTGGTGTCGGGCTTCTGGGGCGTGGCCCGCCACTTCAACTACGTCGGCGACCTGATGG 886037672 248876 NM_177438.2(DICER1):c.1525C>T (p.R509*) DICER1 May 23, 2017 MedGen:CN072455,OMIM:601200;MedGen:C0027672,SNOMED CT:699346009 DICER1-related pleuropulmonary blastoma cancer predisposition syndrome;Hereditary cancer-predisposing syndrome germline 14 95116680 GATTTTTTTTTTCAGGTACTTAGGAAATTTCGAGCACATGAGACCAACCTGCTTATTGCAA 121434539 32681 NM_004933.2(CDH15):c.178C>T (p.Arg60Cys) CDH15 Dec 01, 2008 MedGen:C2675488,OMIM:612580 Mental retardation, autosomal dominant 3 germline 16 89179551 CCCCCGATCAGCGTATCCGAGAACCACAAGCGTCTCCCCTACCCCCTGGTTCAGGTGAGCA -1 460275 NM_000314.6(PTEN):c.259C>T (p.Gln87Ter) PTEN Mar 08, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1959582,OMIM:601728,Orphanet:ORPHA306498 Hereditary cancer-predisposing syndrome;PTEN hamartoma tumor syndrome germline 10 87933018 TTCTGAGGTTATCTTTTTACCACAGTTGCACAATATCCTTTTGAAGACCATAACCCACCAC 281865487 47582 NM_004614.4(TK2):c.191C>T (p.Thr64Met) TK2 Dec 06, 2012 MedGen:C3149750,OMIM:609560 Mitochondrial DNA depletion syndrome 2 not provided 16 66541919 GTGTCGAGGGCAATATTGCAAGTGGGAAGACGACATGCCTGGAATTCTTCTCCAACGCGAC 119470019 19200 NM_024996.5(GFM1):c.139C>T (p.Arg47Ter) GFM1 Jan 01, 2007 MedGen:C1836797,OMIM:609060,Orphanet:ORPHA137681 Combined oxidative phosphorylation deficiency 1 germline 3 158645686 TCATCAGGGGTGATTCCTAATGAAAAAATACGAAATATTGGAATCTCAGCTCACATTGATT 786204585 186933 NM_000520.5(HEXA):c.1528C>T (p.Arg510Ter) HEXA Dec 20, 2016 MedGen:C0039373,OMIM:272800,Orphanet:ORPHA845,SNOMED CT:111385000;MedGen:CN517202 Tay-Sachs disease;not provided germline;unknown 15 72344139 TCTTGCCATTTCTTCATGTCCTCTTGCAGGCGAGGTGTCCAGGCCCAACCCCTCAATGTAG 886039757 260382 NM_024818.4(UBA5):c.904C>T (p.Gln302Ter) UBA5 Oct 06, 2016 MedGen:C4310700,OMIM:617132 Epileptic encephalopathy, early infantile, 44 germline 3 132675339 TTTCCTACTATGTCCATGAAGCCAAATCCTCAGTGTGATGACAGAAATTGCAGGAAGCAGC 121964877 27280 NM_004360.4(CDH1):c.1792C>T (p.Arg598Ter) CDH1 May 15, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1708349,OMIM:137215,Orphanet:ORPHA26106;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Hereditary diffuse gastric cancer;not provided germline;unknown 16 68822081 GTGAATGACAACGCCCCCATACCAGAACCTCGAACTATATTCTTCTGTGAGAGGAATCCAA 312262785 49777 NM_025137.3(SPG11):c.6856C>T (p.Arg2286Ter) SPG11 Jun 07, 2017 MedGen:C1858479,OMIM:604360,Orphanet:ORPHA2822;MedGen:C1858479,OMIM:604360,Orphanet:ORPHA2822 Spastic paraplegia 11, autosomal recessive;Spastic paraplegia 11, autosomal recessive germline 15 44565997 TCCACCCTTGTTCCTCAGGACTCCTGTGTGCGACAGGCCCAGCACTGTCAGCGGCTCACCA 377130051 260201 NM_000271.4(NPC1):c.1819C>T (p.Arg607Ter) NPC1 Aug 02, 2017 MedGen:C0220756,Orphanet:ORPHA646,SNOMED CT:66751000;MedGen:CN517202 Niemann-Pick disease, type C;not provided germline 18 23545088 CCCAATCTGACCATTTCCTTCACTGCTGAACGAAGTATTGAAGATGAACTAAATCGTGAAA 1085307733 415742 NM_000074.2(CD40LG):c.658C>T (p.Gln220Ter) CD40LG Apr 07, 2017 MedGen:CN517202 not provided germline X 136659287 AATACCCACAGTTCCGCCAAACCTTGCGGGCAACAATCCATTCACTTGGGAGGAGTATTTG 267606852 28686 NM_000175.4(GPI):c.14C>T (p.Thr5Ile) GPI Sep 15, 1996 MedGen:C3150730,OMIM:613470,Orphanet:ORPHA712 Hemolytic anemia, nonspherocytic, due to glucose phosphate isomerase deficiency germline 19 34365280 TACCTTCTAGTCCCGCCATGGCCGCTCTCACCCGGGACCCCCAGTTCCAGAAGCTGCAGCA 121913014 31836 NM_000281.3(PCBD1):c.236C>T (p.Thr79Ile) PCBD1 Jun 01, 1998 MedGen:C1849700,OMIM:264070,Orphanet:ORPHA1578 Hyperphenylalaninemia, BH4-deficient, D germline 10 70884029 TTTCATTTCAGGTCCACATCACGCTGAGCACCCATGAGTGTGCCGGCCTTTCAGAACGGGA 886039568 259842 NM_001453.2(FOXC1):c.256C>T (p.Leu86Phe) FOXC1 Jun 30, 2016 MedGen:C2678503,OMIM:602482;MedGen:CN517202 Axenfeld-Rieger syndrome type 3;not provided germline;unknown 6 1610701 ATGGTGAAGCCGCCCTATAGCTACATCGCGCTCATCACCATGGCCATCCAGAACGCCCCGG 74315512 20721 NM_001169109.1(SCO2):c.268C>T (p.Arg90Ter) SCO2 Mar 22, 2000 MedGen:C1858424,OMIM:604377,Orphanet:ORPHA1561 Cardioencephalomyopathy, fatal infantile, due to cytochrome c oxidase deficiency germline 22 50524144 GCTGAGAAGGAGAGGCTGCAGCAGCAAAAGCGAACAGAAGCCCTGCGCCAGGCAGCTGTGG 312262836 49548 NM_003611.2(OFD1):c.454C>T (p.Gln152Ter) OFD1 Feb 28, 2013 MedGen:C1510460,OMIM:311200,Orphanet:ORPHA2750,SNOMED CT:52868006 Oral-facial-digital syndrome not provided X 13744456 CATTTTTTAAAAGAATTGGCAGAATATCATCAAGCTAAAGAGAGTTGTAATATGGAAACTC 397514716 71565 NM_001127217.2(SMAD9):c.880C>T (p.Arg294Ter) SMAD9 Jan 23, 2017 MedGen:C3888002,OMIM:615342;MedGen:CN517202 Primary pulmonary hypertension 2;not provided germline 13 36865660 CGAGTTGGGGAGACATTCCAGGCTTCCTCCCGAAGTGTGCTCATAGATGGGTTCACCGACC 587777097 102949 NM_052844.3(WDR34):c.472C>T (p.Gln158Ter) WDR34 Feb 10, 2014 MedGen:C3810200,OMIM:615633 Short-rib thoracic dysplasia 11 with or without polydactyly germline 9 128636991 TGTCTGTATACCCTGGGCTACCCGCCAGCCCAAGCGCAGGGTCTGCATGTGACCAGCATCT 121434483 23113 NM_000430.3(PAFAH1B1):c.817C>T (p.Arg273Ter) PAFAH1B1 Mar 09, 2016 MedGen:C1843916,OMIM:607432;MedGen:CN517202 Lissencephaly 1;not provided germline 17 2674205 GTAGCAACAAAGGAATGCAAGGCTGAGCTCCGAGAGCATGAGCATGTGGTAGAATGCATTT 886042347 266466 NM_004006.2(DMD):c.5089C>T (p.Gln1697Ter) DMD Aug 20, 2015 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Becker muscular dystrophy;Duchenne muscular dystrophy germline X 32364647 AATGTGGACCACATCACAAAGTGGATCATTCAGGCTGACACACTTTTGGATGAATCAGAGA 118203925 15669 NM_000277.2(PAH):c.140C>T (p.Ala47Val) PAH May 15, 1994 Human Phenotype Ontology:HP:0004923,MedGen:C0751435;MedGen:CN517202 Hyperphenylalaninemia, non-pku;not provided germline 12 102912819 TGATCTTCTCACTCAAAGAAGAAGTTGGTGCATTGGCCAAAGTATTGCGCTTATTTGAGGT 267606650 20417 NM_005989.3(AKR1D1):c.781C>T (p.Arg261Cys) AKR1D1 Apr 01, 2004 MedGen:C1856127,OMIM:235555,Orphanet:ORPHA79303 Bile acid synthesis defect, congenital, 2 germline 7 138107506 TACAATAAGACAGCAGCTCAAATTGTTTTGCGTTTCAACATCCAGCGAGGGGTGGTTGTCA 979212552 419349 NM_000251.2(MSH2):c.1042C>T (p.Gln348Ter) MSH2 Jul 25, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0009405,Orphanet:ORPHA443090 Hereditary cancer-predisposing syndrome;Hereditary nonpolyposis colon cancer germline 2 47416395 GGACAAAGACTTGTTAACCAGTGGATTAAGCAGCCTCTCATGGATAAGAACAGAATAGAGG 57508089 57196 NM_170707.3(LMNA):c.1146C>T (p.Gly382=) LMNA Dec 24, 2016 MedGen:CN043576;Human Phenotype Ontology:HP:0006785,MedGen:C0686353,Orphanet:ORPHA263,SNOMED CT:93153005;MedGen:CN517202 Charcot-Marie-Tooth disease, type 2;Limb-girdle muscular dystrophy;not provided germline 1 156136110 GATCCACGCCTACCGCAAGCTCTTGGAGGGCGAGGAGGAGAGGTGGGCTGGGGAGACGTCG 121908191 27780 NM_005546.3(ITK):c.1003C>T (p.Arg335Trp) ITK May 01, 2012 MedGen:C3552634,OMIM:613011 Lymphoproliferative syndrome 1 germline 5 157241663 TCAATCAACCCAGGCCTGGTGACTCGACTCCGGTATCCAGTTTGTTTTGGGAGGCAGAAAG 797045283 207388 NM_020732.3(ARID1B):c.5968C>T (p.Arg1990Ter) ARID1B Oct 05, 2017 MedGen:C3281201,OMIM:614562;MedGen:CN517202 Mental retardation, autosomal dominant 12;not provided germline 6 157207109 CTTCTTCACCACGAGCATCCAGAGAGAAAGCGAGCACCGCAGACCTATGAGAAAGAGGAGG 746877365 395447 NM_004415.3(DSP):c.3337C>T (p.Arg1113Ter) DSP Oct 23, 2017 MedGen:C1843896,OMIM:607450;MedGen:C0035828,OMIM:192500,Orphanet:ORPHA101016,SNOMED CT:20852007;MedGen:CN517202 Arrhythmogenic right ventricular cardiomyopathy, type 8;Long QT syndrome 1;not provided germline 6 7579527 CAAATAAAAGAACTCAATGAGAAGATCACCCGACTGACTTATGAGATTGAAGATGAAAAGA 121917718 28832 NM_006193.2(PAX4):c.490C>T (p.Arg164Trp) PAX4 Jul 01, 2007 MedGen:C2677132,OMIM:612225 Maturity-onset diabetes of the young, type 9 germline 7 127613804 CCCCGGGGTACCCACCCAGGGACCGGCCACCGGAATCGGACTATCTTCTCCCCAAGCCAAG 397509002 69322 NM_007294.3(BRCA1):c.2713C>T (p.Gln905Ter) BRCA1 Jan 20, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145;MedGen:CN517202;MedGen:CN169374 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome;not provided;not specified germline 17 43092818 CAAAGTCCAAAAGTCACTTTTGAATGTGAACAAAAGGAAGAAAATCAAGGAAAGAATGAGT 104886035 99615 NM_001360.2(DHCR7):c.151C>T (p.Pro51Ser) DHCR7 Oct 18, 2016 MedGen:C0175694,OMIM:270400,Orphanet:ORPHA818,SNOMED CT:43929004;MedGen:CN517202 Smith-Lemli-Opitz syndrome;not provided germline 11 71444163 GCGAGCGTCATCTTCCTACTGCTGTTCGCCCCCTTCATCGTCTACTACTTCATCATGGCTT 1057517689 359166 NM_032793.4(MFSD2A):c.497C>T (p.Ser166Leu) MFSD2A Jan 23, 2018 MedGen:C4225310,OMIM:616486 Primary autosomal recessive microcephaly 15 germline 1 39965490 TTCTATGCCAGTGTTTCCATGTTCCCTACTCGGCTCTCACCATGTTCATCAGCACCGAGCA 119485094 20076 NM_022041.3(GAN):c.1429C>T (p.Arg477Ter) GAN Apr 01, 2009 MedGen:C1850386,OMIM:256850,Orphanet:ORPHA643,SNOMED CT:128207002 Giant axonal neuropathy germline 16 81365405 GCTATGGAGCTGTATGTGTTTGGGGGAGTCCGAAGTCGTGAGGACGCCCAGGGTAGCGAGA 587778842 132330 NM_000321.2(RB1):c.763C>T (p.Arg255Ter) RB1 Sep 13, 2016 MedGen:C0027672,SNOMED CT:699346009;Human Phenotype Ontology:HP:0009919,MeSH:D012175,MedGen:C0035335,OMIM:180200,Orphanet:ORPHA790 Hereditary cancer-predisposing syndrome;Retinoblastoma germline;somatic 13 48362859 CCCATTAATGGTTCACCTCGAACACCCAGGCGAGGTCAGAACAGGAGTGCACGGATAGCAA 137852497 25102 NM_000194.2(HPRT1):c.508C>T (p.Arg170Ter) HPRT1 Mar 01, 2000 MedGen:C0023374,OMIM:300322,SNOMED CT:10406007 Lesch-Nyhan syndrome germline X 134498412 ATTAACAGCTTGCTGGTGAAAAGGACCCCACGAAGTGTTGGATATAAGCCAGACTGTAAGT 886037972 249171 NM_007294.3(BRCA1):c.280C>T (p.Gln94Ter) BRCA1 Sep 08, 2016 MedGen:C2676676,OMIM:604370 Breast-ovarian cancer, familial 1 germline 17 43104889 GAAGAGCTATTGAAAATCATTTGTGCTTTTCAGCTTGACACAGGTTTGGAGTGTAAGTGTT 121907999 18903 NM_000053.3(ATP7B):c.865C>T (p.Gln289Ter) ATP7B May 01, 2017 MedGen:C0019202,OMIM:277900,Orphanet:ORPHA905,SNOMED CT:88518009;MedGen:CN517202 Wilson disease;not provided germline;unknown 13 51974355 ATTGGCCAGCTCCTAGGGGTTCAAAGTATTCAAGTGTCCTTGGAGAACAAAACTGCCCAAG 756459525 263457 NM_080675.3(SUN5):c.824C>T (p.Thr275Met) SUN5 Nov 07, 2016 MedGen:C4310674,OMIM:617187 Spermatogenic failure 16 germline 20 32985809 TGGCTCAGAAGGTTTACCTGTCCAACCTCACGCTGCAGCACATCCCCAAGACCATCTCATT 796052095 200703 NM_145207.2(SPATA5):c.556C>T (p.Arg186Ter) SPATA5 Sep 03, 2015 MedGen:C4225276,OMIM:616577,Orphanet:ORPHA457351 Epilepsy, hearing loss, and mental retardation syndrome germline 4 122934147 GGCAACTTTCTGTATTGTACATTCTATGGACGACCGTACAAGCTGCAAGTATTGCGAGTGA 121918297 17749 NM_178443.2(FERMT3):c.1729C>T (p.Arg577Ter) FERMT3 May 07, 2009 MedGen:C2748536,OMIM:612840,Orphanet:ORPHA99844 Leukocyte adhesion deficiency, type III germline 11 64223094 AAAGACGAGATCCTGGGCATCGCCAACAACCGACTGATCCGCATCGACTTGGCCGTGGGCG -1 431724 NM_006269.1(RP1):c.2056C>T (p.Gln686Ter) RP1 Jan 01, 2015 Human Phenotype Ontology:HP:0000547,MeSH:D012174,MedGen:C0035334,OMIM:268000,Orphanet:ORPHA791,SNOMED CT:28835009 Retinitis pigmentosa unknown 8 54625938 TCTCGACAGCAAGCAATAAATTCCAGGTATCAAGATGGACAGCTTGCAACCAAAGGAATTC -1 461705 NM_005055.4(RAPSN):c.853C>T (p.Gln285Ter) RAPSN Jul 11, 2017 MedGen:C4225367,OMIM:616326;MedGen:C1276035,OMIM:208150,SNOMED CT:401138005 Myasthenic syndrome, congenital, 11, associated with acetylcholine receptor deficiency;Pena-Shokeir syndrome type I germline 11 47441670 ATCATGACCGAGATCGGAAACCGCCTGGGGCAGGTGCAGGCGCTGCTGGGTGTGGCCAAGT 121434348 17049 NM_001134831.1(AHI1):c.1051C>T (p.Arg351Ter) AHI1 Sep 01, 2004 MedGen:C1837713,OMIM:608629 Joubert syndrome 3 germline 6 135457594 GATGACCTTGTCTTGGGAGTTTACATTCACCGAACTGATAGACTTAAGTCAGATTTTATGA 137853032 21547 NM_001080463.1(DYNC2H1):c.8512C>T (p.Arg2838Ter) DYNC2H1 Jun 01, 2017 MedGen:CN674505;MedGen:C2751311,OMIM:613091,SNOMED CT:254051008 Short-rib polydactyly syndrome type III;Short-rib thoracic dysplasia 3 with or without polydactyly germline;paternal 11 103209933 GGTGGTGGAGAAAAATACAATGATAAAAAACGAAAAGAAGAAAAGAAAAAAAATTCAGGTA 62130681 361736 NM_004341.4(CAD):c.5365C>T (p.Arg1789Ter) CAD Sep 08, 2017 MedGen:C4225320,OMIM:616457,Orphanet:ORPHA448010 Epileptic encephalopathy, early infantile, 50 germline;paternal 2 27239442 GTGAAGGGCACCGTCCGCCGTGTGGTCCTGCGAGGGGAGGTTGCCTATATCGATGGGCAGG 864622772 222900 NM_000202.7(IDS):c.1393C>T (p.Gln465Ter) IDS Oct 30, 2013 MedGen:C0026705,OMIM:309900,SNOMED CT:70737009 Mucopolysaccharidosis, MPS-II unknown X 149483006 GGTAATCCCCGTGAACTGATTGCCTATAGCCAGTATCCCCGGCCTTCAGACATCCCTCAGT 587781698 151087 NM_000051.3(ATM):c.8998C>T (p.Gln3000Ter) ATM Jun 08, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0027672,SNOMED CT:699346009 Ataxia-telangiectasia syndrome;Hereditary cancer-predisposing syndrome germline;unknown 11 108365335 CTTTGTGTTTTTGTCCTTAGTGATATTGACCAGAGTTTCAACAAAGTAGCTGAACGTGTCT 879255643 247544 NM_198335.3(GANAB):c.2515C>T (p.Arg839Trp) GANAB Feb 22, 2018 na POLYCYSTIC KIDNEY DISEASE 3 WITH POLYCYSTIC LIVER DISEASE germline 11 62626633 GGGACAATCGTGCCTCGATGGATGCGAGTGCGGCGGTCTTCAGAATGTATGAAGGATGACC 202080674 188001 NM_000124.3(ERCC6):c.2008C>T (p.Arg670Trp) ERCC6 Jun 17, 2011 MedGen:C0751038,OMIM:133540,Orphanet:ORPHA90322 Cockayne syndrome B germline 10 49482848 CCTTTCCTCAAATAGTTTCGCACCCCTCATCGGATCATTCTGTCTGGCTCACCGATGCAAA 28940874 18873 NM_000017.3(ACADS):c.575C>T (p.Ala192Val) ACADS Jan 01, 2001 MedGen:C0342783,OMIM:201470,Orphanet:ORPHA26792,SNOMED CT:124166007 Deficiency of butyryl-CoA dehydrogenase germline 12 120737939 CCAAAGCCTGGATCACCAATGCCTGGGAGGCTTCGGCTGCCGTGGTCTTTGCCAGCACGGA 527236157 152926 NM_001194958.2(KCNJ18):c.1219C>T (p.Gln407Ter) KCNJ18 Jul 31, 2014 MedGen:C0268446,OMIM:188580,Orphanet:ORPHA79102,SNOMED CT:30967002 Thyrotoxic periodic paralysis germline 17 21704005 GACGGCCGAAGCCGGGATGGCCTCAGCCCCCAGGCCAGGCATGACTTTGACAGACTCCAGG 772624348 207024 NM_015120.4(ALMS1):c.10483C>T (p.Gln3495Ter) ALMS1 Jan 14, 2014 MedGen:C0268425,OMIM:203800,Orphanet:ORPHA64,SNOMED CT:63702009 Alstrom syndrome germline 2 73572357 ATTCATCATCCCGTACACCTACCAAGTGATCAAGATATTTGCCATGAATCTTTGGGAAAGA 769440001 393456 NM_015120.4(ALMS1):c.5590C>T (p.Gln1864Ter) ALMS1 Oct 09, 2016 MedGen:C0268425,OMIM:203800,Orphanet:ORPHA64,SNOMED CT:63702009 Alstrom syndrome germline 2 73452114 CAGAGAGAGCACTCTGTCATTTCTTATGAGCAGGAGTTGCCAGATCTTACTGAAGTAACTT -1 451215 NM_000179.2(MSH6):c.973C>T (p.Gln325Ter) MSH6 Mar 30, 2017 MedGen:C0009405,Orphanet:ORPHA443090 Hereditary nonpolyposis colon cancer germline 2 47798956 TCTAGGAAGGAAACGCCCTCAGCCACCAAACAAGCAACTAGCATTTCATCAGAAACCAAGA 202047589 200670 NM_138413.3(HOGA1):c.569C>T (p.Pro190Leu) HOGA1 Nov 27, 2014 MedGen:C3150878,OMIM:613616,Orphanet:ORPHA93600 Primary hyperoxaluria, type III germline 10 97599780 TGGATGCAGTGGTCACGCTTTCCCAGCACCCGAATATTGTGGGCATGAAGGACAGCGGTGG 781688103 389219 NM_194248.2(OTOF):c.4747C>T (p.Arg1583Cys) OTOF Jun 04, 2016 MedGen:C1832828,OMIM:601071 Deafness, autosomal recessive 9 germline 2 26465724 ATTGGGGAAACCAAGATCGACCTGGAGAACCGCTTCTACAGCAAGCACCGCGCCACCTGCG 180177296 200582 NM_000030.2(AGXT):c.922C>T (p.Gln308Ter) AGXT Nov 27, 2014 MedGen:C0268164,OMIM:259900,Orphanet:ORPHA93598,SNOMED CT:65520001 Primary hyperoxaluria, type I germline 2 240877612 CTGCATGGGCGCCTGCAGGCACTGGGGCTGCAGCTCTTCGTGAAGGACCCGGTAAGGAGGC 121909120 22409 NM_001083962.1(TCF4):c.1738C>T (p.Arg580Trp) TCF4 Jun 22, 2017 MedGen:C1970431,OMIM:610954,Orphanet:ORPHA2896;MedGen:CN239858;MedGen:CN517202 Pitt-Hopkins syndrome;Severe intellectual deficiency;not provided de novo;germline 18 55228988 AGGATGGCCAACAATGCCCGAGAGCGTCTGCGGGTCCGTGACATCAACGAGGCTTTCAAAG 397515640 94247 NM_001942.3(DSG1):c.601C>T (p.Gln201Ter) DSG1 Mar 01, 2009 MedGen:C1835661,OMIM:148700 Keratosis palmoplantaris striata 1 germline 18 31331784 AACTCAAAAATAGCCTTCAAGATTATAAGACAAGAACCTTCAGATTCACCAATGTTTATTA 730881369 240964 NM_000051.3(ATM):c.4396C>T (p.Arg1466Ter) ATM Jul 31, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0027672,SNOMED CT:699346009 Ataxia-telangiectasia syndrome;Hereditary cancer-predisposing syndrome germline 11 108289761 GGCTTAGGAGGAGCTTGGGCCTTTGTTCTTCGAGACGTTATTTATACTTTGATTCACTATA 199474699 24609 m.15990C>T MT-TP Jul 01, 1993 Human Phenotype Ontology:HP:0003198,MedGen:C0026848 Myopathy germline MT 15990 AGAAAAAGTCTTTAACTCCACCATTAGCACCCAAAGCTAAGATTCTAATTTAAACTATTCT 121912467 29781 NM_000213.4(ITGB4):c.3841C>T (p.Arg1281Trp) ITGB4 Oct 06, 2016 MedGen:C1856934,OMIM:226730,Orphanet:ORPHA79403;MedGen:CN517202 Epidermolysis bullosa junctionalis with pyloric atresia;not provided germline 17 75752221 AAGAAAGTGCTGGTTGACAACCCTAAGAACCGGATGCTGCTTATTGAGAACCTTCGGGAGT 373740199 76347 NM_032957.4(RTEL1):c.3028C>T (p.Arg1010Ter) RTEL1 Sep 26, 2016 MedGen:C0265965,Orphanet:ORPHA1775,SNOMED CT:74911008;MedGen:C3808802;MedGen:C3554656,OMIM:615190;MedGen:CN517202 Dyskeratosis congenita;Dyskeratosis congenita, autosomal dominant, 4;Dyskeratosis congenita, autosomal recessive, 5;not provided germline;unknown 20 63693247 TGTGGCTATCGGCCTGAGCACAGCATTCCCCGAAGGCAGCGGGCACAGCCGGTCCTGGACC 28937872 20584 NM_006783.4(GJB6):c.263C>T (p.Ala88Val) GJB6 Oct 01, 2000 Human Phenotype Ontology:HP:0007529,MedGen:C0162361,OMIM:129500,Orphanet:ORPHA189,SNOMED CT:54209007 Hidrotic ectodermal dysplasia syndrome germline 13 20223218 CCCTCCAGCTGATCTTCGTCTCCACCCCAGCGCTGCTGGTGGCCATGCATGTGGCCTACTA 121912731 32829 NM_001681.3(ATP2A2):c.322C>T (p.Gln108Ter) ATP2A2 Mar 01, 1999 MedGen:C0022595,OMIM:124200,Orphanet:ORPHA218,SNOMED CT:48611009 Keratosis follicularis germline 12 110292122 TTAGTAGCCAATGCAATTGTGGGTGTATGGCAGGTAAGCAAAAATTCCTGTACTGCAAAAT 121434369 17124 NM_000159.3(GCDH):c.1204C>T (p.Arg402Trp) GCDH Apr 06, 2017 Human Phenotype Ontology:HP:0003530,MedGen:C4025603;MedGen:C0268595,OMIM:231670,Orphanet:ORPHA25,SNOMED CT:360416003,SNOMED CT:76175005;MedGen:CN517202 Glutaric acidemia;Glutaric aciduria, type 1;not provided germline;unknown 19 12897824 AATGGGATTTCTGACGAGTATCACGTGATCCGGCACGCCATGAACCTGGAGGCCGTGAACA 111033798 36637 NM_000155.3(GALT):c.970C>T (p.Pro324Ser) GALT Dec 04, 2012 MedGen:C0268151,OMIM:230400,Orphanet:ORPHA79239,SNOMED CT:124354006 Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase not provided 9 34649475 AACCATTGGCAGCTGCACGCTCATTACTACCCTCCGCTCCTGCGCTCTGCCACTGTCCGGA 121913400 32622 NM_001904.3(CTNNB1):c.98C>T (p.Ser33Phe) CTNNB1 May 31, 2016 na;Human Phenotype Ontology:HP:0030078,MeSH:C538231,MedGen:C0152013;MedGen:C0007112;MedGen:C0278701;Human Phenotype Ontology:HP:0011459,MedGen:C0152018,Orphanet:ORPHA70482;MeSH:D015179,MedGen:CN236642;MedGen:C2239176,OMIM:114550,Orphanet:ORPHA88673,SNOMED CT:187769009,SNOMED CT:25370001;MeSH:C562393,MedGen:C0151779,SNOMED CT:93655004;MedGen:C0153574,Orphanet:ORPHA213569;Human Phenotype Ontology:HP:0002885,MeSH:D008527,MedGen:C0025149,OMIM:155255,Orphanet:ORPHA616;Human Phenotype Ontology:HP:0006725,MedGen:C0281361;Human Phenotype Ontology:HP:0030434,MeSH:D018296,MedGen:C0206711,OMIM:132600,Orphanet:ORPHA91414;Human Phenotype Ontology:HP:0006740,MedGen:C0279680 ADRENAL CORTICAL NEOPLASM;Adenocarcinoma of lung;Adenocarcinoma of prostate;Adenocarcinoma of stomach;Carcinoma of esophagus;Colorectal Neoplasms;Hepatocellular carcinoma;Malignant melanoma of skin;Malignant neoplasm of body of uterus;Medulloblastoma;Pancreatic adenocarcinoma;Pilomatrixoma;Transitional cell carcinoma of the bladder somatic 3 41224610 GTCACTGGCAGCAACAGTCTTACCTGGACTCTGGAATCCATTCTGGTGCCACTACCACAGC 797046033 208457 NM_001083962.1(TCF4):c.1411C>T (p.Gln471Ter) TCF4 Sep 11, 2014 MedGen:C1970431,OMIM:610954,Orphanet:ORPHA2896 Pitt-Hopkins syndrome germline 18 55234623 CTGAGAGGCAGCCATTCTCTTCTGCCAAACCAGGTTCCGGTTCCACAGCTTCCTGTCCAGT 377767326 36143 NM_005359.5(SMAD4):c.403C>T (p.Arg135Ter) SMAD4 Dec 04, 2012 MedGen:C0345893,OMIM:174900,Orphanet:ORPHA329971,SNOMED CT:9273005 Juvenile polyposis syndrome not provided 18 51048839 AGTGTCTGTGTGAATCCATATCACTACGAACGAGTTGTATCACCTGGAATTGGTAAGTAGA 369947678 38909 NM_013444.3(UBQLN2):c.1573C>T (p.Pro525Ser) UBQLN2 Aug 21, 2011 MedGen:C3275459,OMIM:300857 Amyotrophic lateral sclerosis 15, with or without frontotemporal dementia germline X 56565446 CCCATAGGACCCACTGGCCCTGCAGCCCCCCCTGGCTCCACCGGCTCTGGTGGCCCCACGG 387906718 38929 NM_004463.2(FGD1):c.1966C>T (p.Arg656Ter) FGD1 Feb 01, 2010 MedGen:C0175701,OMIM:305400,SNOMED CT:14921002 Aarskog syndrome germline X 54455497 CTAAAGGAGAGCTCCAACCTCAATCTGCCTCGAACCTTCCTGGTGTCAGGAAAGCAGCGCT 879255217 434350 NM_000527.4(LDLR):c.2476C>T (p.Pro826Ser) LDLR - MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11129599 AAGAACATCAACAGCATCAACTTTGACAACCCCGTCTATCAGAAGACCACAGAGGATGAGG -1 476667 NM_000059.3(BRCA2):c.3385C>T (p.Gln1129Ter) BRCA2 Jun 27, 2016 MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009 Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome germline 13 32337740 GAAGAATCAGGAAGTCAGTTTGAATTTACTCAGTTTAGAAAACCAAGCTACATATTGCAGA 121913625 29128 NM_000257.3(MYH7):c.1357C>T (p.Arg453Cys) MYH7 Aug 23, 2017 MedGen:C3495498,OMIM:192600;MedGen:C0340429,Orphanet:ORPHA217635,SNOMED CT:233878008;Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Familial hypertrophic cardiomyopathy 1;Familial restrictive cardiomyopathy;Hypertrophic cardiomyopathy;Primary familial hypertrophic cardiomyopathy;Primary familial hypertrophic cardiomyopathy;not provided germline 14 23429005 ATCAATGCCACCCTGGAGACCAAGCAGCCACGCCAGTACTTCATAGGAGTCCTGGACATCG 757563721 241219 NM_016156.5(MTMR2):c.832C>T (p.Gln278Ter) MTMR2 Feb 12, 2016 MedGen:CN043578 Charcot-Marie-Tooth disease, type IV germline 11 95849835 AAGGTTTTATCATGGATTCATCCTGAAAGTCAAGCCACAATCACTCGGTGTAGCCAGCCCA 587783476 169269 NM_004380.2(CREBBP):c.286C>T (p.Gln96Ter) CREBBP Feb 08, 2013 MedGen:C0035934,OMIM:180849,Orphanet:ORPHA353277,SNOMED CT:45582004 Rubinstein-Taybi syndrome germline 16 3850809 ATAGGAAATGTGAGCGCCAGCAGCCCCGTGCAGCAGGGCCTGGGTGGCCAGGCTCAAGGGC -1 467850 NM_003079.4(SMARCE1):c.757C>T (p.Gln253Ter) SMARCE1 Mar 20, 2017 MedGen:C1333989,OMIM:607174 Meningioma, familial germline 17 40631651 GCTGAACTTCTTCAAATAGAGGAACGACACCAGGAGAAGAAGAGGAAATTCCTGGAAAGCA 267606769 31847 NM_001361.4(DHODH):c.595C>T (p.Arg199Cys) DHODH Jan 01, 2010 MedGen:C0265257,OMIM:263750,SNOMED CT:66038001 Miller syndrome germline 16 72021201 GACGCCGCGGAGGACTACGCAGAAGGGGTGCGCGTACTGGGCCCCCTGGCCGACTACCTGG 864622051 221054 NM_000295.4(SERPINA1):c.538C>T (p.Gln180Ter) SERPINA1 Mar 08, 2016 MedGen:C0221757,OMIM:613490,Orphanet:ORPHA60,SNOMED CT:30188007 Alpha-1-antitrypsin deficiency germline;unknown 14 94382700 AACTTCGGGGACACCGAAGAGGCCAAGAAACAGATCAACGATTACGTGGAGAAGGGTACTC 61761869 273372 NM_000295.4(SERPINA1):c.1177C>T (p.Pro393Ser) SERPINA1 May 09, 2017 MedGen:C0221757,OMIM:613490,Orphanet:ORPHA60,SNOMED CT:30188007;MedGen:CN517202 Alpha-1-antitrypsin deficiency;not provided germline 14 94378529 TCTATCCCCCCCGAGGTCAAGTTCAACAAACCCTTTGTCTTCTTAATGATTGAACAAAATA 397509426 75125 NM_013334.3(GMPPB):c.95C>T (p.Pro32Leu) GMPPB May 04, 2017 MedGen:C3809221,OMIM:615351;MedGen:C3714932,OMIM:615352,Orphanet:ORPHA363623;MedGen:CN517202 Muscular dystrophy-dystroglycanopathy (congenital with mental retardation), type b, 14;Muscular dystrophy-dystroglycanopathy (limb-girdle), type c, 14;not provided germline;paternal 3 49723632 CGAAGCCACTGGTGGACTTCTGCAATAAGCCCATCTTGCTGCACCAAGTGGAGGCGCTAGC 45483392 27432 NM_000548.4(TSC2):c.5024C>T (p.Pro1675Leu) TSC2 Jan 18, 2017 MedGen:C0751674,OMIM:606690,Orphanet:ORPHA538,SNOMED CT:73017001;MedGen:C1860707,OMIM:613254;MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000;MedGen:CN517202 Lymphangiomyomatosis;Tuberous sclerosis 2;Tuberous sclerosis syndrome;not provided germline 16 2087897 AGTTCAACTTTGTCCACGTGATCGTCACCCCGCTGGACTACGAGTGCAACCTGGTGTCCCT 387906669 38785 NM_001111035.2(ACP5):c.667C>T (p.Gln223Ter) ACP5 Feb 01, 2011 MedGen:C1842763,OMIM:607944 Spondyloenchondrodysplasia with immune dysregulation germline 19 11576311 GAGCACGGGCCTACCCACTGCCTGGTCAAGCAGCTACGGCCACTGCTGGCCACATACGGGG 747916314 442704 NM_000228.2(LAMB3):c.2914C>T (p.Arg972Ter) LAMB3 Sep 27, 2017 MedGen:CN517202 not provided germline 1 209618044 CTCTCCCTGCTGCTTCTCTCACCCAGGAGCCGAGCCCATGCAGTGGAGGGCCAGGTGGAAG 587784464 169452 NM_001083962.1(TCF4):c.469C>T (p.Arg157Ter) TCF4 Feb 26, 2017 MedGen:C1970431,OMIM:610954,Orphanet:ORPHA2896;MedGen:CN517202 Pitt-Hopkins syndrome;not provided germline 18 55350904 CAGTACTATCAGTATTCTAGCAATAATCCCCGAAGGAGGCCTCTTCACAGTAGTGCCATGG 121908484 20826 NM_014270.4(SLC7A9):c.997C>T (p.Arg333Trp) SLC7A9 Feb 15, 2001 Human Phenotype Ontology:HP:0003131,MedGen:C0010691,OMIM:220100,Orphanet:ORPHA214,SNOMED CT:85020001 Cystinuria germline 19 32843932 TTATTTTCCAGACTCATTTACGTGGCGGGCCGGGAGGGTCACATGCTCAAAGTGCTTTCTT 137854441 15815 NM_198488.3(FAM83H):c.1408C>T (p.Gln470Ter) FAM83H Apr 01, 2009 MedGen:C0399376,OMIM:130900,Orphanet:ORPHA100032,SNOMED CT:109471001 Amelogenesis imperfecta, hypocalcification type germline 8 143728053 TGGGACCCGCAGCTCACGCCGGCGCGCCCGCAAGGCCTGTTCGAGAAGCTTCGCGGGGGCC 121434604 28789 NM_000316.2(PTH1R):c.310C>T (p.Arg104Ter) PTH1R Mar 01, 2007 MedGen:C1859148,OMIM:215045,Orphanet:ORPHA50945 Chondrodysplasia Blomstrand type germline 3 46895866 GACAAGGAGGCACCCACTGGCAGCAGGTACCGAGGTACGTCTCTGCTTCCATGCATCCAGC 782623477 264486 NM_003172.3(SURF1):c.688C>T (p.Arg230Ter) SURF1 Jun 21, 2016 MedGen:CN517202 not provided germline 9 133352509 AACAATCCAGAAAGGAACCACTGGCATTATCGAGACCTGGAAGCTATGGCCAGAATCACAG 724159947 171928 NM_001987.4(ETV6):c.641C>T (p.Pro214Leu) ETV6 May 13, 2015 Human Phenotype Ontology:HP:0004377,MeSH:D019337,MedGen:C0376545,SNOMED CT:129154003;MedGen:CN130080;MedGen:C4015537,OMIM:616216 Hematologic neoplasm;Thrombocytopenia;Thrombocytopenia 5 germline 12 11869601 CCCTGGACAACATGATCCGCCGCCTCTCCCCGGCTGAGAGAGCTCAGGGACCCAGGCCGCA 111033705 36519 NM_000155.3(GALT):c.490C>T (p.Gln164Ter) GALT Dec 04, 2012 MedGen:C0268151,OMIM:230400,Orphanet:ORPHA79239,SNOMED CT:124354006 Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase not provided 9 34647944 TGGGCCTCAGTCACAGAGGAGCTGGGTGCCCAGTACCCTTGGGTGCAGGTTTGTGAGGTCG 758972589 181842 NM_000465.3(BARD1):c.334C>T (p.Arg112Ter) BARD1 Sep 28, 2017 MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Familial cancer of breast;Hereditary cancer-predisposing syndrome;not provided germline 2 214792327 GACAGCATGATTCAACTTTGTAGTAAGCTTCGAAATTTGCTACATGACAATGAGCTGTCAG 121434312 16848 NM_152594.2(SPRED1):c.349C>T (p.Arg117Ter) SPRED1 Aug 06, 2016 MedGen:C1969623,OMIM:611431,Orphanet:ORPHA137605 Legius syndrome germline 15 38322382 GCTGATGCTAGGGCTTTTGATAGAGGTATCCGAAGAGCTATAGAGGATATTTCTCAAGGTA 74315376 20479 NM_005149.2(TBX19):c.856C>T (p.Arg286Ter) TBX19 Mar 23, 2001 Human Phenotype Ontology:HP:0011748,MedGen:C0342388,OMIM:201400,SNOMED CT:237692001 ACTH deficiency germline 1 168305136 CACCATGGCTGTGAGCACTATTCGGGTCTCCGAGGACACCGGCAGGCTCCCTACCCTTCTG 373584239 431511 NM_015125.4(CIC):c.1474C>T (p.Arg492Trp) CIC Aug 30, 2017 MedGen:CN368509,OMIM:617600 MENTAL RETARDATION, AUTOSOMAL DOMINANT 45 germline 19 42290242 GTCTCCCTTCCTTTCATGCAGGGCTTTGGTCGGAAGGTGTTTTCACCTGTGATCCGTTCCT -1 475845 NM_000051.3(ATM):c.8050C>T (p.Gln2684Ter) ATM Nov 25, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 11 108335008 ACAGGAGAATATGGAAATCTGGTGACTATACAGTCATTTAAAGCAGAATTTCGCTTAGCAG 132630324 26056 NM_001184880.1(PCDH19):c.253C>T (p.Gln85Ter) PCDH19 Jun 01, 2008 MedGen:C1848137,OMIM:300088,Orphanet:ORPHA101039 Early infantile epileptic encephalopathy 9 germline X 100408345 AATCCCAGCTCTGGCCTGCTGGTCACCAAGCAGAAGATTGACCGTGATCTGCTGTGCCGCC 111033794 36639 NM_000155.3(GALT):c.974C>T (p.Pro325Leu) GALT Dec 04, 2012 MedGen:C0268151,OMIM:230400,Orphanet:ORPHA79239,SNOMED CT:124354006 Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase not provided 9 34649479 ATTGGCAGCTGCACGCTCATTACTACCCTCCGCTCCTGCGCTCTGCCACTGTCCGGAAATT 786201005 181485 NM_005101.3(ISG15):c.163C>T (p.Gln55Ter) ISG15 Jan 01, 2015 MedGen:C4015293,OMIM:616126,Orphanet:ORPHA319563 Immunodeficiency 38 with basal ganglia calcification germline 1 1014143 CTGGCTGTCCACCCGAGCGGTGTGGCGCTGCAGGACAGGGTCCCCCTTGCCAGCCAGGGCC 786201733 185299 NM_032043.2(BRIP1):c.667C>T (p.Gln223Ter) BRIP1 Apr 18, 2014 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 17 61808718 CACTGTTCTAGGTGCTGTTGTTCTACTAAACAAGGAAACAGTCAAGAGTCATCGAATACCA -1 479639 NM_001128849.1(SMARCA4):c.2032C>T (p.Gln678Ter) SMARCA4 May 10, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 19 11007932 GAGGAGGAGGAAGAGCAGCCGCAGGCAGCACAGCCTCCCACCCTGCCCGTGGAGGAGAAGA -1 482226 NM_000355.3(TCN2):c.871C>T (p.Gln291Ter) TCN2 Dec 08, 2017 MedGen:CN517202 not provided germline 22 30615718 GGAGCCTTCCAGAATGCTCTCATGATTTCCCAGCTGCTGCCCGTTCTGAACCACAAGACCT 121917839 23134 NM_006261.4(PROP1):c.358C>T (p.Arg120Cys) PROP1 Apr 09, 2014 MedGen:C0878683,OMIM:262600 Pituitary hormone deficiency, combined 2 germline;unknown 5 177993032 CCTACCCCTTCTCAGGTCTGGTTCCAGAACCGCAGAGCTAAGCAACGGAAGCAAGAGCGCT 121908286 16277 NM_152419.2(HGSNAT):c.1553C>T (p.Ser518Phe) HGSNAT Oct 01, 2011 MedGen:C0086649,OMIM:252930,Orphanet:ORPHA79271,SNOMED CT:75238000 Mucopolysaccharidosis, MPS-III-C germline 8 43197682 CCTTCTCTTCCCCATTACAGGGGCTCATTTCTGTTGCTCTGACGAAGGTTTCTGAAAATGA 121909386 15823 NM_213606.3(SLC16A12):c.733C>T (p.Gln245Ter) SLC16A12 Aug 29, 2011 MedGen:C2677587,OMIM:612018 Cataract, juvenile, with microcornea and glucosuria germline 10 89438899 ACTCCAGAGCAGAACCATGTGTGTAGAACTCAGAAAGAAGACATTAAGCGGGTGTCTCCCT 794728654 197530 NM_130799.2(MEN1):c.1324C>T (p.Gln442Ter) MEN1 Mar 25, 2015 MedGen:CN517202 not provided germline 11 64805060 CTGCATGTGGGCTGGGCCACCTTTCTTGTGCAGTCCCTAGGCCGTTTTGAGGGACAGGTGA 1060501023 400968 NM_000138.4(FBN1):c.6784C>T (p.Gln2262Ter) FBN1 Jul 13, 2017 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:CN118826,Orphanet:ORPHA91387 Marfan syndrome;Thoracic aortic aneurysm and aortic dissection germline 15 48430758 GAAGAGGGAAAACATGACTGTACTGAAAAACAAATGGAATGCAAGAACCTCATTGGCACAT 397514525 48128 NM_000359.2(TGM1):c.943C>T (p.Arg315Cys) TGM1 Jan 18, 2013 MedGen:C3536797,OMIM:242300 Autosomal recessive congenital ichthyosis 1 germline 14 24259745 CTGGACCGGCGGGGGATGCCATATGGAGGCCGTGGAGACCCAGTCAATGTCTCCCGGGTCA 1057517747 360655 NM_000206.2(IL2RG):c.43C>T (p.Gln15Ter) IL2RG Apr 01, 2015 MedGen:CN517202 not provided germline X 71111497 TCATTACCATTCACATCCCTCTTATTCCTGCAGCTGCCCCTGCTGGGAGTGGGGCTGAACA 121908350 19960 NM_022124.5(CDH23):c.3880C>T (p.Gln1294Ter) CDH23 Jan 01, 2001 MedGen:C1832845,OMIM:601067 Usher syndrome, type 1D germline 10 71732151 TCGGCCACTGACCAGGCCCCGCCCTTCAACCAGGGCTTCTGCAGCGTCTACATCACTCTGC 118203384 58205 NM_000368.4(TSC1):c.445C>T (p.Gln149Ter) TSC1 Feb 16, 2017 MedGen:C1854465,OMIM:191100;MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000 Tuberous sclerosis 1;Tuberous sclerosis syndrome germline 9 132923411 ATGCTACCAATGATTCCACAGTCTGGGAAACAGCATCTTCTTGATTTCTTTGACATTTTTG 121917790 26972 NM_000431.3(MVK):c.494C>T (p.Pro165Leu) MVK Jun 01, 1999 MedGen:C0398691,OMIM:260920,Orphanet:ORPHA343,SNOMED CT:234538002 Hyperimmunoglobulin D with periodic fever germline 12 109581517 CAGCCCTCCTGACTGTGTGCGAGGAGATCCCAAACCCGCTGAAGGACGGGGATTGCGTCAA 863225455 214864 NM_016218.3(POLK):c.2033C>T (p.Ser678Phe) POLK Nov 20, 2013 Human Phenotype Ontology:HP:0012125,MedGen:C0376358,OMIM:176807,SNOMED CT:399068003 Malignant tumor of prostate somatic 5 75596726 AAGTTAACAAGAAAGAAAATGTTCCTGCTTCTTCACTTTGTGAGAAGCAAGATTATGAAGC 80357215 68781 NM_007294.3(BRCA1):c.1066C>T (p.Gln356Ter) BRCA1 Jan 01, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline 17 43094465 CCCCTGTGTGAGAGAAAAGAATGGAATAAGCAGAAACTGCCATGCTCAGAGAATCCTAGAG 397515458 76926 NM_006073.3(TRDN):c.613C>T (p.Gln205Ter) TRDN Aug 21, 2017 MedGen:C3809536,OMIM:615441;MedGen:CN517202 Ventricular tachycardia, catecholaminergic polymorphic, 5, with or without muscle weakness;not provided germline 6 123503899 TATTTCAACATCTTTTAACTTTATACAGAACAGAAGAAAGCTAAGACTGCAGAAAAGAGTG 104894977 24792 NM_003140.2(SRY):c.4C>T (p.Gln2Ter) SRY Jan 01, 1998 MedGen:C2748896,OMIM:400044 46,XY sex reversal, type 1 germline Y 2787600 TTTGTCGCACTCTCCTTGTTTTTGACAATGCAATCATATGCTTCTGCTATGTTAAGCGTAT 367543259 36542 NM_000155.3(GALT):c.542C>T (p.Ser181Phe) GALT Dec 04, 2012 MedGen:C0268151,OMIM:230400,Orphanet:ORPHA79239,SNOMED CT:124354006 Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase not provided 9 34648149 TTGAAAACAAAGGTGCCATGATGGGCTGTTCTAACCCCCACCCCCACTGCCAGGTAAGGGT 398124051 100673 NM_004006.2(DMD):c.7672C>T (p.Gln2558Ter) DMD Jul 31, 2017 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Duchenne muscular dystrophy germline X 31679575 ATTTTTCCTTTTATTCTAGTTGAAAGAATTCAGAATCAGTGGGATGAAGTACAAGAACACC 387907056 39887 NM_198488.3(FAM83H):c.1366C>T (p.Gln456Ter) FAM83H Apr 01, 2009 MedGen:C0399376,OMIM:130900,Orphanet:ORPHA100032,SNOMED CT:109471001 Amelogenesis imperfecta, hypocalcification type germline 8 143728095 AGCCACTTCCACCGTGACCAGCTCTACCAGCAGCAGTACCAGTGGGACCCGCAGCTCACGC 766256429 204584 NM_003995.3(NPR2):c.2455C>T (p.Arg819Cys) NPR2 Oct 01, 2013 MedGen:C4225399,OMIM:616255 Short stature with nonspecific skeletal abnormalities germline 9 35806474 GCCAATAACTTGGAGAAGCTGGTGGAGGAACGCACACAGGCCTATCTGGAGGAAAAACGCA 121434226 18453 NM_006147.3(IRF6):c.250C>T (p.Arg84Cys) IRF6 Mar 29, 2017 MedGen:C0265259,OMIM:119500,SNOMED CT:66783006;MedGen:CN517202 Popliteal pterygium syndrome;not provided germline 1 209796477 CCTGACCCAGCTAAATGGAAGGCCCAGCTGCGCTGTGCTCTCAATAAGAGCAGAGAATTCA -1 434422 NM_001001563.3(TIMM50):c.649C>T (p.Arg217Trp) TIMM50 Oct 03, 2017 MedGen:CN510468,OMIM:617698 3-METHYLGLUTACONIC ACIDURIA, TYPE IX germline 19 39485570 CTAGATCCAATTCTGGTACAGCAGTTGCGCCGGACATACAAATATTTCAAAGATTATAGAC 62646861 105189 NM_000350.2(ABCA4):c.454C>T (p.Arg152Ter) ABCA4 Jan 01, 2016 MeSH:C535804,MedGen:C1855465,OMIM:248200;MedGen:CN517202 Stargardt disease 1;not provided germline 1 94103131 TTCTCTTATTCATATGTAGGAAGAGGAATACGAATAAGGGATATCTTGAAAGATGAAGAAA 121964908 15262 NM_000027.3(AGA):c.302C>T (p.Ala101Val) AGA Apr 15, 2016 Human Phenotype Ontology:HP:0012068,MedGen:C0268225,OMIM:208400 Aspartylglucosaminuria germline 4 177439668 TTTCTTGCAGCACTACTATGGATGTAGGAGCAGTAGGAGATCTCAGACGAATTAAAAATGC 80338898 33910 NM_000137.2(FAH):c.782C>T (p.Pro261Leu) FAH Jun 16, 2017 MedGen:C0268490,OMIM:276700,Orphanet:ORPHA882,SNOMED CT:124536006,SNOMED CT:410056006;MedGen:CN517202 Tyrosinemia type I;not provided germline;unknown 15 80173089 TTGGGAAGAGTTTTGGGACCACTGTCTCTCCGTGGGTGGTGCCCATGGATGCTCTCATGCC 80338699 18216 NM_138477.3(CDAN1):c.3389C>T (p.Pro1130Leu) CDAN1 Sep 01, 2011 MedGen:C0271933,OMIM:224120,Orphanet:ORPHA98869,SNOMED CT:59548005 Congenital dyserythropoietic anemia, type I germline 15 42725550 TGTGGAAGGAAGACTTTCAGGGGCCGGTTCCGCTGCAGCTGCTGCTGAGCCCAAGAAATGT 28999110 33391 NM_000080.3(CHRNE):c.721C>T (p.Leu241Phe) CHRNE Jan 20, 2009 Gene:8144,MedGen:C1853949,OMIM:605809 Myasthenic syndrome, congenital, 4a, slow-channel germline 17 4901071 ATCTACTCGCTCATCATCCGCCGGAAGCCGCTCTTCTACGTCATTAACATCATCGTGCCCT 267606949 18909 NM_006623.3(PHGDH):c.403C>T (p.Arg135Trp) PHGDH May 01, 2009 MedGen:C1866174,OMIM:601815 Phosphoglycerate dehydrogenase deficiency germline 1 119726897 ACGGCTTCGATGAAGGACGGCAAATGGGAGCGGAAGAAGGTGAGCAGCGGCCTTGACTCGC 74315359 17452 NM_032409.2(PINK1):c.938C>T (p.Thr313Met) PINK1 Oct 01, 2006 MedGen:C1853833,OMIM:605909 Parkinson disease 6, autosomal recessive early-onset germline 1 20644651 TCCACCCTGAAGGCCTGGGCCATGGCCGGACGCTGTTCCTCGTTATGAAGAAGTAAGTGAC 863225250 214439 NM_004366.5(CLCN2):c.925C>T (p.Arg309Ter) CLCN2 Sep 09, 2015 MedGen:C3810242,OMIM:615651,Orphanet:ORPHA363540 Leukoencephalopathy with ataxia germline 3 184357240 TTAGAGACTATTACAGCCCTCTTCAAAACCCGATTCCGGCTCGACTTCCCCTTTGACCTGC 397514477 40113 NM_001031726.3(C19orf12):c.32C>T (p.Thr11Met) C19orf12 Jun 14, 2016 MedGen:C3280371,OMIM:614298,Orphanet:ORPHA289560;MedGen:CN517202 Neurodegeneration with brain iron accumulation 4;not provided germline 19 29708415 CCTCTGAACTTCTCCCTCGAAGGCCCGCCACGATGACTATCATGGTGGAGGACATCATGAA 137852562 24843 NM_000044.4(AR):c.2323C>T (p.Arg775Cys) AR Oct 01, 2013 MedGen:C0039585,OMIM:300068,SNOMED CT:12313004 Androgen resistance syndrome germline X 67721837 TTTTCCTCTGTGTATCTCCTTCCCAGGTACCGCATGCACAAGTCCCGGATGTACAGCCAGT 199422289 47733 NM_198253.2(TERT):c.97C>T (p.Pro33Ser) TERT May 10, 2012 MedGen:C1800706,OMIM:178500,Orphanet:ORPHA79126,SNOMED CT:28168000 Idiopathic fibrosing alveolitis, chronic form not provided 5 1294893 CCGCTGGCCACGTTCGTGCGGCGCCTGGGGCCCCAGGGCTGGCGGCTGGTGCAGCGCGGGG 876660797 233359 NM_005732.3(RAD50):c.2284C>T (p.Gln762Ter) RAD50 Sep 23, 2015 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 5 132603376 AACAAACTGCAGAATGTCAATAGAGACATACAGCGCCTAAAGAACGACATAGAAGAACAAG 876659250 236595 NM_007194.3(CHEK2):c.1459C>T (p.Gln487Ter) CHEK2 May 02, 2015 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 22 28694034 ACAGAAGAAGCCTTAAGACACCCGTGGCTTCAGGTGGGTGTGGGACAGTGCCTGCTAGCAT 121908663 21311 NM_002335.3(LRP5):c.2557C>T (p.Gln853Ter) LRP5 Nov 16, 2001 MedGen:C0432252,OMIM:259770,Orphanet:ORPHA2788,SNOMED CT:254112001 Osteoporosis with pseudoglioma germline 11 68413742 GACGATCTCCCGCACCCGTTCGGTCTGACGCAGTACAGCGATTATATCTACTGGACAGACT -1 467932 NM_000088.3(COL1A1):c.4090C>T (p.Gln1364Ter) COL1A1 Jun 27, 2017 MedGen:C0023931,OMIM:166200,SNOMED CT:385482004 Osteogenesis imperfecta type I germline 17 50185936 TTCCTGCGCCTGATGTCCACCGAGGCCTCCCAGAACATCACCTACCACTGCAAGAACAGCG 80359163 67417 NM_000059.3(BRCA2):c.9100C>T (p.Gln3034Ter) BRCA2 Sep 08, 2016 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145;MedGen:CN517202 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome;not provided germline 13 32379896 AACATACAGTTAGCAGCGACAAAAAAAACTCAGTATCAACAACTACCGGTACAAACCTTTC 1060501186 399698 NM_004572.3(PKP2):c.1844C>T (p.Ser615Phe) PKP2 Oct 17, 2016 MedGen:C1836906,OMIM:609040 Arrhythmogenic right ventricular cardiomyopathy, type 9 germline 12 32822594 AGAATTGTGTGTGCATTCTTCATAACCTCTCCTACCAGCTGGAGGCAGAGCTCCCAGAGAA 587781722 151118 NM_000051.3(ATM):c.5908C>T (p.Gln1970Ter) ATM Aug 15, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Ataxia-telangiectasia syndrome;Hereditary cancer-predisposing syndrome;not provided germline;unknown 11 108310305 ATCTATGCAGATAAGAAAAGTATGGATGATCAAGAGAAAAGGTAATGGAATTTAGAATTTT 104894083 21007 NM_006269.1(RP1):c.2035C>T (p.Gln679Ter) RP1 Aug 01, 1999 MedGen:C0220701,OMIM:180100 Retinitis pigmentosa 1 germline 8 54625917 GCCAGCAAAAAGAAGAAAAAATCTCGACAGCAAGCAATAAATTCCAGGTATCAAGATGGAC 121918305 19850 NM_012179.3(FBXO7):c.65C>T (p.Thr22Met) FBXO7 Jan 20, 2009 MedGen:C1850100,OMIM:260300,Orphanet:ORPHA171695 Parkinson disease 15 germline 22 32475067 GGCCGCTGGAGGTGCCCGAGACGGAGCCGACGCTGGGGCATTTGCGCTCGCACCTGAGGCA 121918370 15434 NM_144612.6(LOXHD1):c.2008C>T (p.Arg670Ter) LOXHD1 Sep 12, 2016 MedGen:C2746083,OMIM:613079 Deafness, autosomal recessive 77 germline 18 46572125 GACAAGGATAAGGATGATGGGCAGCTGGTCCGAGAGTTGCTACCCAGTGACAGCAGCGCGA 587779745 131863 NM_020732.3(ARID1B):c.4102C>T (p.Gln1368Ter) ARID1B Feb 17, 2014 MedGen:CN185481 Coffin Siris/Intellectual Disability germline 6 157198899 TATGGAGGGCACCAGCCCGGCCTGTACCCACAGCAGCCGGTGAGTTGGCAAGTGGGCGTGG 5030810 221350 NM_000551.3(VHL):c.337C>T (p.Arg113Ter) VHL Nov 26, 2016 Gene:8056,MedGen:C1837915,OMIM:263400,Orphanet:ORPHA238557;MedGen:C0019562,OMIM:193300,Orphanet:ORPHA892,SNOMED CT:46659004;MedGen:C0019562,OMIM:193300,Orphanet:ORPHA892,SNOMED CT:46659004 Erythrocytosis, familial, 2;Von Hippel-Lindau syndrome;Von Hippel-Lindau syndrome germline 3 10142184 CCTGGCACGGGCCGCCGCATCCACAGCTACCGAGGTACGGGCCCGGCGCTTAGGCCCGACC 397515621 79339 NM_130810.3(DNAAF4):c.808C>T (p.Arg270Ter) DNAAF4 Sep 22, 2016 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244;MedGen:C3809641,OMIM:615482 Ciliary dyskinesia;Primary ciliary dyskinesia 25 germline 15 55439557 TTCTAGTGGCTACACAAACAAGCTGAGGCACGAAGAGCAATGAATACTGACATAGCTGAAC 281875190 38973 NM_003070.4(SMARCA2):c.2815C>T (p.His939Tyr) SMARCA2 Feb 26, 2012 MedGen:C1303073,OMIM:601358,Orphanet:ORPHA3051,SNOMED CT:401046009;MedGen:CN517202 Nicolaides-Baraitser syndrome;not provided germline 9 2088545 GAAGAAACTATATTGATCATCAGGCGTCTACATAAGGTGTTAAGACCATTTTTACTAAGGA 121913301 28115 NM_000321.2(RB1):c.1072C>T (p.Arg358Ter) RB1 May 08, 2017 MedGen:C0027672,SNOMED CT:699346009;Human Phenotype Ontology:HP:0009919,MeSH:D012175,MedGen:C0035335,OMIM:180200,Orphanet:ORPHA790 Hereditary cancer-predisposing syndrome;Retinoblastoma germline;somatic;unknown 13 48368549 TTATTTAGTTTTGAAACACAGAGAACACCACGAAAAAGTAACCTTGATGAAGAGGTGAATG 886040978 262639 NM_017780.3(CHD7):c.496C>T (p.Gln166Ter) CHD7 Sep 05, 2016 MedGen:C0265354,OMIM:214800,Orphanet:ORPHA138,SNOMED CT:47535005 CHARGE association germline 8 60741928 ATACGAGCCCCCTACCAGCAGCAGCAGCCACAGCCGCAGCCACCGCAGCCGGCTCCGTCGG 137854436 15810 NM_198488.3(FAM83H):c.1192C>T (p.Gln398Ter) FAM83H Feb 01, 2008 MedGen:C0399376,OMIM:130900,Orphanet:ORPHA100032,SNOMED CT:109471001 Amelogenesis imperfecta, hypocalcification type germline 8 143728269 GGGGAGCTCGCGGGCGCGCGGGGCTTCTTCCAGGCGCGGCACCTGGAGATGGACGCCTTCA 121434412 21685 NM_003659.3(AGPS):c.926C>T (p.Thr309Ile) AGPS Jan 15, 2001 MedGen:C1838612,OMIM:600121,Orphanet:ORPHA309803 Rhizomelic chondrodysplasia punctata type 3 germline 2 177461948 GTCATGAACCAGATTCCCTGGAGTTCAGTACTGTAGGAGGATGGGTATCTACTCGCGCATC 80358828 66641 NM_000059.3(BRCA2):c.5959C>T (p.Gln1987Ter) BRCA2 Nov 24, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline 13 32340314 ATTTTTAGCACAGCAAGTGGAAAATCTGTCCAGGTATCAGATGCTTCATTACAAAACGCAA 387906631 38666 NM_001145661.1(GATA2):c.1061C>T (p.Thr354Met) GATA2 Oct 02, 2014 Human Phenotype Ontology:HP:0004808,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:ORPHA519,SNOMED CT:17788007;MedGen:C3280030,OMIM:614172,Orphanet:ORPHA228423;MedGen:CN118027;MeSH:D009190,MedGen:C0026986,OMIM:614286 Acute myeloid leukemia;Dendritic cell, monocyte, B lymphocyte, and natural killer lymphocyte deficiency;Leukemia, acute myeloid, susceptibility to;Myelodysplastic syndrome germline;somatic 3 128481901 GAGCCGGCACCTGTTGTGCAAATTGTCAGACGACAACCACCACCTTATGGCGCCGAAACGC 398124152 100972 NM_004453.3(ETFDH):c.1367C>T (p.Pro456Leu) ETFDH Oct 27, 2016 MedGen:C0268596,OMIM:231680,Orphanet:ORPHA26791,SNOMED CT:22886006;MedGen:C0268596,OMIM:231680,Orphanet:ORPHA26791,SNOMED CT:22886006;MedGen:CN517202 Glutaric aciduria, type 2;Glutaric aciduria, type 2;not provided germline 4 158706270 AAGAGCTATATTCTGTTAGAAATATAAGACCGTCCTGCCACGGAGTACTGGGTGTATATGG 368085516 263635 NM_181789.2(GLDN):c.1435C>T (p.Arg479Ter) GLDN Nov 09, 2016 MedGen:C4310670,OMIM:617194 Lethal congenital contracture syndrome 11 germline 15 51404533 AAATCCAAGGCTGGCAACGCCTTCATTGCCCGAGGAATCCTCTATGTCACAGACACCAAAG 61751408 22921 NM_000350.2(ABCA4):c.6079C>T (p.Leu2027Phe) ABCA4 Apr 06, 2017 MedGen:C1858806,OMIM:604116;MeSH:C535804,MedGen:C1855465,OMIM:248200;MedGen:CN517202 Cone-rod dystrophy 3;Stargardt disease 1;not provided germline 1 94005509 TGTCCTCAGTTTGATGCAATTGATGAGCTGCTCACAGGACGAGAACATCTTTACCTTTATG 80356889 69097 NM_007294.3(BRCA1):c.1999C>T (p.Gln667Ter) BRCA1 Sep 08, 2016 MedGen:C2676676,OMIM:604370;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 1;Hereditary cancer-predisposing syndrome;not provided germline 17 43093532 CAAATGCCAGTCAGGCACAGCAGAAACCTACAACTCATGGAAGGTAAAGAACCTGCAACTG 1064793482 406842 NM_020732.3(ARID1B):c.4456C>T (p.Gln1486Ter) ARID1B Apr 14, 2015 MedGen:CN517202 not provided germline 6 157201050 CAGAACAGGCAGGGCCCTGGCGGCCCTACACAGGCGCCCCCTTACCCAGGCATGAACCGCA 771373235 404693 NM_152773.4(TCTEX1D2):c.262C>T (p.Arg88Ter) TCTEX1D2 Mar 26, 2017 MedGen:CN241837,OMIM:617405 Short-rib thoracic dysplasia 17 with or without polydactyly germline 3 196306998 TATTTTTTCTTTCTAGAAATGGGATTTGACCGATACAAAATGGTGGTGCAAGTAGTGATTG 132630306 26099 NM_000252.2(MTM1):c.670C>T (p.Arg224Ter) MTM1 Feb 08, 2013 MedGen:C0410203,OMIM:310400,Orphanet:ORPHA596,SNOMED CT:46804001 Severe X-linked myotubular myopathy germline X 150641410 CGGAGAGTTGCAACTTTTAGGTCCCGAAATCGAATTCCAGTGAGTACTGCAATTAACGTTT 397514728 75242 NM_000388.3(CASR):c.662C>T (p.Pro221Leu) CASR Jan 14, 2015 MedGen:C0342345,OMIM:601198;MedGen:CN517202 Hypocalcemia, autosomal dominant 1;not provided germline 3 122261697 CAATTGCAGCTGATGACGACTATGGGCGGCCGGGGATTGAGAAATTCCGAGAGGAAGCTGA 121908678 21251 NM_001126105.2(SLC7A7):c.1228C>T (p.Arg410Ter) SLC7A7 Jan 01, 2008 MedGen:C0268647,OMIM:222700,Orphanet:ORPHA470,SNOMED CT:303852004 Lysinuric protein intolerance germline 14 22774371 CAGCTTTATCTGCGCTGGAAGGAGCCTGATCGACCTCGTCCCCTCAAGGTAAGGCAACTCC 75559353 17891 NM_020184.3(CNNM4):c.2149C>T (p.Gln717Ter) CNNM4 Feb 01, 2009 MedGen:C1857588,OMIM:217080,Orphanet:ORPHA1021 Cone-rod dystrophy amelogenesis imperfecta germline 2 96809338 TTCCTCATGCAGATCACTCGGCAGCAGTACCAGAACGGGCTGCTGGCTTCTCGCATGGAGA 398123852 100354 NM_004006.2(DMD):c.1261C>T (p.Gln421Ter) DMD Sep 12, 2013 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009;MedGen:C3668940,OMIM:302045;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Becker muscular dystrophy;Dilated cardiomyopathy 3B;Duchenne muscular dystrophy germline X 32644202 AAATTATCAGAAGATGAAGAAACTGAAGTACAAGAGCAGATGAATCTCCTAAATTCAAGAT 779614747 187703 NM_001165963.1(SCN1A):c.5656C>T (p.Arg1886Ter) SCN1A Dec 12, 2016 MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002;MedGen:CN517202 Severe myoclonic epilepsy in infancy;not provided de novo;germline 2 165991619 CTAGGAGAGAGTGGAGAGATGGATGCTCTACGAATACAGATGGAAGAGCGATTCATGGCTT 869025280 223018 NM_020771.3(HACE1):c.655C>T (p.Arg219Ter) HACE1 Feb 04, 2016 MedGen:C4225215,OMIM:616756,Orphanet:ORPHA464282 Spastic paraplegia and psychomotor retardation with or without seizures germline 6 104796988 CAGAGAGATACAGCACAGATCCTACTATTACGAGGAGCCAAATATCTGCCAGATAAAAATG 727503210 174787 NM_000256.3(MYBPC3):c.979C>T (p.Gln327Ter) MYBPC3 Jul 31, 2014 MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005 Primary familial hypertrophic cardiomyopathy germline 11 47346318 GCAGAGGAGGACGTGTGGGAGATCCTACGGCAGGCACCCCCATCTGAGTACGAGCGCATCG 137852252 25644 NM_000133.3(F9):c.998C>T (p.Pro333Leu) F9 Oct 09, 2017 MedGen:C0008533,OMIM:306900,Orphanet:ORPHA98879,SNOMED CT:41788008 Hereditary factor IX deficiency disease germline X 139561683 AACCCTTAGTGCTAAACAGCTACGTTACACCTATTTGCATTGCTGACAAGGAATACACGAA -1 472085 NM_000033.3(ABCD1):c.1270C>T (p.Gln424Ter) ABCD1 Mar 10, 2017 MedGen:C0162309,OMIM:300100,Orphanet:ORPHA43,SNOMED CT:65389002 Adrenoleukodystrophy germline X 153736390 GGCTACACAGCCCGGGTGCACGAGATGTTCCAGGTATTTGAAGATGTTCAGCGCTGTCACT 118192180 76893 NM_000540.2(RYR1):c.14473C>T (p.Arg4825Cys) RYR1 May 11, 2010 MedGen:C0751951,OMIM:117000,Orphanet:ORPHA597,SNOMED CT:43152001;MedGen:CN517202 Central core disease;not provided unknown 19 38580090 CTGGACATCGCCATGGGGGTCAAGACGCTGCGCACCATCCTGTCCTCTGTCACCCACAATG 273898674 69115 NM_007294.3(BRCA1):c.2059C>T (p.Gln687Ter) BRCA1 May 17, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0027672,SNOMED CT:699346009;Human Phenotype Ontology:HP:0100013,MeSH:D001943,MedGen:C1458155,Orphanet:ORPHA180250,SNOMED CT:126926005 Breast-ovarian cancer, familial 1;Hereditary cancer-predisposing syndrome;Neoplasm of the breast germline 17 43093472 GGAGCCAAGAAGAGTAACAAGCCAAATGAACAGACAAGTAAAAGACATGACAGCGATACTT 267606682 19668 NM_021830.4(TWNK):c.1120C>T (p.Arg374Trp) TWNK May 02, 2017 MedGen:C1836439,OMIM:609286;MedGen:CN517202 Autosomal dominant progressive external ophthalmoplegia with mitochondrial DNA deletions 3;not provided germline 10 100989330 CACAAGTCCATCGTATCTTTCCGGCAGCTTCGGGAGGAGGTGCTAGGAGAACTGTCAAATG 121913580 29325 NM_000254.2(MTR):c.1753C>T (p.Arg585Ter) MTR Jul 01, 2002 MedGen:C1855128,OMIM:250940,Orphanet:ORPHA2170 METHYLCOBALAMIN DEFICIENCY, cblG TYPE germline 1 236852578 GGAGGTCTTTCCAACTTGTCCTTCTCCTTCCGAGGAATGGAAGCCATTCGAGAAGCAATGC 375661404 76339 NM_178170.2(NEK8):c.1795C>T (p.Arg599Ter) NEK8 Jun 01, 2013 MedGen:C3809434,OMIM:615415 Renal-hepatic-pancreatic dysplasia 2 germline 17 28741140 CAGCACGGACAGTTGGGCACCAATACTCGCCGAGGCAGTCGGGCACCCTGTAAGGTCCAAG 142991475 263942 NM_002016.1(FLG):c.1063C>T (p.Gln355Ter) FLG Mar 09, 2016 MedGen:CN517202 not provided germline 1 152313823 AGTCATGGGCACTCTGCAGACAGCTCCAGACAATCAGGCACTCGTCACGCAGAGACTTCCT 267607054 21466 NM_003060.3(SLC22A5):c.1195C>T (p.Arg399Trp) SLC22A5 Sep 08, 2016 MedGen:C0342788,OMIM:212140,Orphanet:ORPHA158,SNOMED CT:21764004;MedGen:CN517202 Renal carnitine transport defect;not provided germline;unknown 5 132390832 TTGGCCTGGCTGCTGCTGCAATATTTGCCCCGGCGCTATTCCATGGCCACTGCCCTCTTCC 483353067 143138 NM_001164342.2(ZBTB20):c.1802C>T (p.Thr601Ile) ZBTB20 - MedGen:C0796121,OMIM:259050,Orphanet:ORPHA3042 Primrose syndrome de novo 3 114350276 AGAACTACGTCAAGCACATGTTCGTACACACAGGTGAGTGTCACCCCACCTGGAGGCCTGG 104893624 29059 NM_003467.2(CXCR4):c.1000C>T (p.Arg334Ter) CXCR4 May 01, 2003 MedGen:C1834176;MedGen:C0472817,OMIM:193670,Orphanet:ORPHA51636,SNOMED CT:234571003 Myelokathexis, isolated;Warts, hypogammaglobulinemia, infections, and myelokathexis unknown 2 136114928 TCCAGCCTCAAGATCCTCTCCAAAGGAAAGCGAGGTGGACATTCATCTGTTTCCACTGAGT 1131691949 421990 NM_015346.3(ZFYVE26):c.7060C>T (p.Gln2354Ter) ZFYVE26 May 24, 2017 MedGen:CN517202 not provided germline 14 67754139 TTGCATCGGTGCGAAAGTGCTGGGACCTCTCAAATCACCACTTTGCCTCTGCCAACCCTGT 267606762 15070 NM_138413.3(HOGA1):c.289C>T (p.Arg97Cys) HOGA1 Nov 27, 2014 MedGen:C3150878,OMIM:613616,Orphanet:ORPHA93600 Primary hyperoxaluria, type III germline 10 97598852 AGTGAGCGCCTCGAGGTGGTGAGCCGTGTGCGCCAGGCCATGCCCAAGAACAGGCTCCTGC 111033658 36471 NM_000155.3(GALT):c.199C>T (p.Arg67Cys) GALT May 08, 2017 MedGen:C0268151,OMIM:230400,Orphanet:ORPHA79239,SNOMED CT:124354006 Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase germline 9 34647205 GTGGAGCCCCAGCTTCTGAAGACAGTGCCCCGCCATGACCCTCTCAACCCTCTGTGTCCTG 121912996 31882 NM_004415.3(DSP):c.5800C>T (p.Arg1934Ter) DSP Jan 17, 2017 MedGen:C1864826,OMIM:609638,Orphanet:ORPHA158687;MedGen:CN517202 Epidermolysis bullosa, lethal acantholytic;not provided germline 6 7583062 ACACAGTCACAGTTAGAAACAGAACGCTCCCGATATCAGAGGGAGATTGATAAACTCAGAC 775180716 247640 NM_001080114.1(LDB3):c.728C>T (p.Pro243Leu) LDB3 Aug 16, 2016 Human Phenotype Ontology:HP:0003715,MedGen:C2678065,Orphanet:ORPHA593,SNOMED CT:699269005 Myofibrillar myopathy unknown 10 86692544 CCAGCTCCTTTCTACCAACAGTGCAAGACCCTGATGAAGAAGCTCTGCGAAGGTCAAGGTA -1 452358 NM_145860.1(PDCD10):c.301C>T (p.Gln101Ter) PDCD10 May 02, 2017 MedGen:C1864040,OMIM:603285 Cerebral cavernous malformations 3 germline 3 167695690 TATATGATTGAACGACCAGAGCCAGAATTCCAAGACCTAAACGAAAAGGCACGAGCACTTA 397507667 66132 NM_000059.3(BRCA2):c.3442C>T (p.Gln1148Ter) BRCA2 Oct 18, 2016 MedGen:C2675520,OMIM:612555 Breast-ovarian cancer, familial 2 germline 13 32337797 CAGAAGAGTACATTTGAAGTGCCTGAAAACCAGATGACTATCTTAAAGACCACTTCTGAGG 387907045 39854 NM_198525.2(KIF7):c.3001C>T (p.Gln1001Ter) KIF7 Jun 01, 2011 Gene:46,MedGen:C0796147,OMIM:200990,Orphanet:ORPHA36 Acrocallosal syndrome, Schinzel type germline;inherited 15 89631605 CAGCTGCGGCAGGGCAGCGCCCAGAGCCAGCAGCAGATCCGCGGGGAGATCGACAGCCTGC 121909309 23567 NM_000178.3(GSS):c.847C>T (p.Arg283Cys) GSS Nov 01, 1996 Human Phenotype Ontology:HP:0003343,MedGen:C0398746,OMIM:266130,Orphanet:ORPHA289846,SNOMED CT:234589002 Gluthathione synthetase deficiency germline 20 34932121 GTCTTCTTCCCTCTGCAGAATTGGGAAGCACGTCTACTGCTGGAGAGGTCACATGCTGCCA 786204688 186707 NM_138694.3(PKHD1):c.9319C>T (p.Arg3107Ter) PKHD1 May 13, 2016 MedGen:C0085548,OMIM:263200,Orphanet:ORPHA731,SNOMED CT:28770003 Autosomal recessive polycystic kidney disease germline;unknown 6 51748297 GCAGGATCAGAGAGACTTGGCTTTCACATCCGAGGCCACAAGTGCTCCTCTTGTGAACTGC 80357262 69729 NM_007294.3(BRCA1):c.3967C>T (p.Gln1323Ter) BRCA1 Nov 18, 2016 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome germline 17 43091564 CAGGATCCTTTCTTGATTGGTTCTTCCAAACAAATGAGGCATCAGTCTGAAAGCCAGGGAG 587777247 171839 NM_005211.3(CSF1R):c.2342C>T (p.Ala781Val) CSF1R Dec 18, 2014 Gene:8156,MedGen:C1857300,OMIM:221820 Hereditary diffuse leukoencephalopathy with spheroids germline 5 150056319 TCCCTCAGTGCATCCACCGGGACGTGGCAGCGCGTAACGTGCTGTTGACCAATGGTCATGT 876659533 236324 NM_032043.2(BRIP1):c.2053C>T (p.Gln685Ter) BRIP1 Jun 02, 2015 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 17 61776445 GAAGTGGGAGCACTTTTGTTATCTGTGTGCCAGACTGTGAGCCAAGGAATTTTGTGTTTCT 797044896 205348 NM_006306.3(SMC1A):c.3196C>T (p.Arg1066Cys) SMC1A Jul 30, 2013 MeSH:D030342,MedGen:C0950123 Inborn genetic diseases germline X 53382595 AAGCAGGCATTCGAACAGATCAAGAAGGAGCGCTTTGACCGCTTCAATGCTTGTTTTGAAT 775437084 463539 NM_004863.3(SPTLC2):c.547C>T (p.Arg183Trp) SPTLC2 Nov 22, 2017 MedGen:C3150896,OMIM:613640 Hereditary sensory and autonomic neuropathy type IC germline 14 77576851 ATGGGTTCCTACAACTATCTTGGATTTGCACGGAATACTGGATCATGTCAAGAAGCAGCCG 387907298 45812 NM_000023.3(SGCA):c.574C>T (p.Arg192Ter) SGCA Sep 24, 2012 MedGen:C2936332,OMIM:608099,Orphanet:ORPHA62 Limb-girdle muscular dystrophy, type 2D germline 17 50168562 GGGGGCCGTGTCCCCCTTCCCATTGAGGGCCGAAAAGAAGGGTAGGTGTGCAACCCTAGAG 80356487 27039 NM_000151.3(G6PC):c.1039C>T (p.Gln347Ter) G6PC Jul 03, 2017 MedGen:C2919796,OMIM:232200;MedGen:CN517202 Glycogen storage disease type 1A;not provided germline;unknown 17 42911391 TCCGTCAGTGTCATCCCCTACTGCCTCGCCCAGGTCCTGGGCCAGCCGCACAAGAAGTCGT 397514660 48735 NM_025099.5(CTC1):c.859C>T (p.Arg287Ter) CTC1 Mar 12, 2013 MedGen:C2677299,OMIM:612199 Cerebroretinal microangiopathy with calcifications and cysts 1 germline 17 8236276 CCTGGTACAGCCTATGTGCTGACAGAACTGCGAGTGTCCAAGATCCGTGGTCAGCGCCAGC 122454127 26694 NM_004586.2(RPS6KA3):c.340C>T (p.Arg114Trp) RPS6KA3 Jan 01, 1999 MedGen:C0265252,OMIM:303600,SNOMED CT:15182000 Coffin-Lowry syndrome germline X 20195131 ATACAATCTTTTATAGTTCGAGACCGAGTTCGGACAAAAATGGAACGTGATATCTTGGTAG 794727270 192361 NM_003688.3(CASK):c.79C>T (p.Arg27Ter) CASK Jun 12, 2014 MedGen:C1845546,OMIM:300422;MedGen:C2677903,OMIM:300749,Orphanet:ORPHA163937 FG syndrome 4;Mental retardation and microcephaly with pontine and cerebellar hypoplasia germline X 41853208 TTGTTTTATAGGGGTCCCTTCAGTGTTGTACGACGATGTATCAACAGAGAAACTGGGCAAC 28940282 17552 NM_000346.3(SOX9):c.493C>T (p.His165Tyr) SOX9 Dec 01, 2001 MedGen:C1861923 Acampomelic campomelic dysplasia germline 17 72122780 GTGGAGGAGGCGGAGCGGCTGCGCGTGCAGCACAAGAAGGACCACCCGGATTACAAGTACC 1131690810 420600 NM_004360.4(CDH1):c.1531C>T (p.Gln511Ter) CDH1 Jul 09, 2013 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 16 68815725 GTGGGCCAGGAAATCACATCCTACACTGCCCAGGAGCCAGACACATTTATGGAACAGAAAA 753330544 195505 NM_206933.2(USH2A):c.13316C>T (p.Thr4439Ile) USH2A Jan 01, 2015 Human Phenotype Ontology:HP:0000547,MeSH:D012174,MedGen:C0035334,OMIM:268000,Orphanet:ORPHA791,SNOMED CT:28835009;MedGen:C1848634,OMIM:276901 Retinitis pigmentosa;Usher syndrome, type 2A germline;unknown 1 215674595 GCACAGCTAGTGTGTCAAAATCTGCCTGGACAATGGAGGCCCTGCCAGAGAACATGGACTC 193922136 44478 NM_000074.2(CD40LG):c.761C>T (p.Thr254Met) CD40LG Feb 26, 2016 MedGen:C0272236,SNOMED CT:82286005;MedGen:C0398689,OMIM:308230,Orphanet:ORPHA101088 Hyperimmunoglobulin M syndrome;Immunodeficiency with hyper IgM type 1 germline X 136659390 CAAGCCAAGTGAGCCATGGCACTGGCTTCACGTCCTTTGGCTTACTCAAACTCTGAACAGT 752697861 449354 NM_001267550.2(TTN):c.102523C>T (p.Arg34175Ter) TTN Aug 04, 2017 MedGen:C1837342,OMIM:608807,Orphanet:ORPHA140922 Limb-girdle muscular dystrophy, type 2J germline 2 178534092 TCTACCCAAGTGACTTGGTACTTTGGCGTCCGACAGCTGGAGAACAGTGAGAAATACGAAA 886044402 274498 NM_004006.2(DMD):c.4312C>T (p.Gln1438Ter) DMD Sep 01, 2016 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Duchenne muscular dystrophy germline X 32390103 AAGAAACATAATCAGGGGAAGGAGGCTGCCCAAAGAGTCCTGTCTCAGATTGATGTTGCAC 111401431 44742 NM_000138.4(FBN1):c.4588C>T (p.Arg1530Cys) FBN1 Jun 27, 2017 MedGen:C0265287,OMIM:102370,Orphanet:ORPHA969,SNOMED CT:254090007;MedGen:CN239144;MedGen:C1851286,OMIM:129600;MedGen:C1851286,OMIM:129600;MedGen:C3280054,OMIM:614185;MedGen:C1858556,OMIM:604308,Orphanet:ORPHA99715;MedGen:C4310796,OMIM:616914,Orphanet:ORPHA300382;MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:C1861456,OMIM:184900,Orphanet:ORPHA2833;MedGen:CN118826,Orphanet:ORPHA91387;MedGen:CN118826,Orphanet:ORPHA91387;MedGen:C1869115,OMIM:608328,Orphanet:ORPHA2084 Acromicric dysplasia;Aortic aneurysm, ascending, and dissection;Ectopia lentis, isolated, autosomal dominant;Ectopia lentis, isolated, autosomal dominant;Geleophysic dysplasia 2;MASS syndrome;Marfan lipodystrophy syndrome;Marfan syndrome;Marfan syndrome;Marfan syndrome;Stiff skin syndrome;Thoracic aortic aneurysm and aortic dissection;Thoracic aortic aneurysm and aortic dissection;Weill-Marchesani syndrome 2 germline;unknown 15 48468097 TTTTGTGTTTGTATATGGTAAATAGATACCCGCTCTGGAAATTGCTATTTGGATATTCGAC 864621974 204427 NM_014112.4(TRPS1):c.1693C>T (p.Gln565Ter) TRPS1 Apr 01, 2015 MedGen:C0432233,OMIM:190350,SNOMED CT:254091006 Trichorhinophalangeal dysplasia type I germline 8 115604276 GTAGTGGGGCCACTTCTCCGTCATTATCAACAGCTCCATAACATTCACAAGTGTACCATTA 80338912 23080 NM_003221.3(TFAP2B):c.706C>T (p.Arg236Cys) TFAP2B Jan 02, 2013 MedGen:C1868570,OMIM:169100,Orphanet:ORPHA46627 Char syndrome germline 6 50836165 ACCGGCGAGGTGTTTTGCTCCGTCCCAGGCCGTTTGTCTCTGCTCAGTTCAACTTCGAAGT -1 442050 NM_000068.3(CACNA1A):c.6046C>T (p.Gln2016Ter) CACNA1A May 03, 2017 MedGen:CN517202 not provided germline 19 13212653 GGACCTGGCCAGAACGCCCTCCCCTCCACCCAGCTGGACCCAGGAGGAGCCCTGTGAGTGT 587777006 70565 NM_006494.3(ERF):c.547C>T (p.Arg183Ter) ERF Apr 07, 2017 MedGen:CN029978,OMIM:123100;Human Phenotype Ontology:HP:0004443,MedGen:C1833340,OMIM:600775 Craniosynostosis 1;Craniosynostosis 4 germline 19 42249565 TTCTCGGCTGTGGTGGCCCGCCGCCTGGGCCGAGGCTCAGTCAGTGACTGTAGTGATGGCA 137852849 17708 NM_001164675.1(SUMF1):c.836C>T (p.Ala279Val) SUMF1 Oct 18, 2016 MedGen:C0268263,OMIM:272200,Orphanet:ORPHA585,SNOMED CT:54898003;MedGen:CN517202 Multiple sulfatase deficiency;not provided germline;unknown 3 4417132 ACACTGGTGAGGATGGCTTCCAAGGAACTGCGCCTGTGAGTAATGAGACCTCTGCAGGAGG 121908212 23527 NM_001127221.1(CACNA1A):c.1997C>T (p.Thr666Met) CACNA1A Aug 30, 2016 MedGen:C1720416,OMIM:108500,Orphanet:ORPHA97,SNOMED CT:420932006;MedGen:C1832894,OMIM:141500;MedGen:C1832885;MedGen:CN517202 Episodic ataxia type 2;Familial hemiplegic migraine type 1;Migraine, sporadic hemiplegic, with progressive cerebellar ataxia;not provided de novo;germline 19 13303877 TGTGTTTCTTCCTCCCCTTTCAGATCCTGACGGGCGAAGACTGGAACGAGGTCATGTACGA 774765029 396209 NM_000553.4(WRN):c.2665C>T (p.Arg889Ter) WRN Nov 02, 2016 MedGen:C0043119,OMIM:277700,Orphanet:ORPHA902,SNOMED CT:51626007 Werner syndrome germline 8 31124556 CTTCTTACTGAGATACGTAATGAGAAGTTTCGATTATACAAATTAAAGATGATGGCAAAGA 121918041 28558 NM_000297.3(PKD2):c.1213C>T (p.Gln405Ter) PKD2 May 31, 1996 MedGen:C2751306,OMIM:613095 Polycystic kidney disease 2 germline 4 88043351 TTGTCAAGAACAAGAGAGGAAACAGCTGCACAAGTTGCTAGCCTCAAGAAAAATGTCTGGC 121918672 27679 NM_000458.3(HNF1B):c.826C>T (p.Arg276Ter) HNF1B Aug 01, 2002 MedGen:C0431693,OMIM:137920,SNOMED CT:253864004 Familial hypoplastic, glomerulocystic kidney germline 17 37731814 CCATCCATTCCCAGGGCAGAATGTTTGCAGCGAGGGGTGTCCCCCTCCAAAGCCCACGGCC 398124466 102231 NM_133433.3(NIPBL):c.2602C>T (p.Arg868Ter) NIPBL Feb 08, 2013 MedGen:CN029798,OMIM:122470 Cornelia de Lange syndrome 1 germline 5 36985782 TCTGATAGTTCAAAAACTGATAAACTAGAACGAAAACACAGGCATGAATCAGGGGACTCAA 281874747 36106 NM_000495.4(COL4A5):c.4751C>T (p.Pro1584Leu) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108694869 TCGCAGTTCACAGTCAGACGATCCAGATTCCCCATTGTCCTCAGGGATGGGATTCTCTGTG 370022675 178795 NM_000081.3(LYST):c.925C>T (p.Arg309Ter) LYST Jan 15, 2015 MedGen:C0007965,OMIM:214500,Orphanet:ORPHA167,SNOMED CT:111396008 Chédiak-Higashi syndrome germline 1 235809893 TGCTGCAGTCTGAGCGACAACTTGGAGAGTCGAGTAGTTTCTGCAGGTTGGACCGAAGAAC -1 465093 NM_025137.3(SPG11):c.4591C>T (p.Gln1531Ter) SPG11 Feb 28, 2017 MedGen:C1858479,OMIM:604360,Orphanet:ORPHA2822 Spastic paraplegia 11, autosomal recessive germline 15 44595303 TCAGTCATCTGGAGAACATTATTAACAAGACAAAAGAGCAAAACTCTCATCAGAGGTTTCC 63749843 94826 NM_000179.2(MSH6):c.3202C>T (p.Arg1068Ter) MSH6 Aug 07, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0009405,Orphanet:ORPHA443090;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:C2936783,OMIM:120435;MedGen:CN517202;MedGen:CN169374 Hereditary cancer-predisposing syndrome;Hereditary nonpolyposis colon cancer;Lynch syndrome;Lynch syndrome I;not provided;not specified germline;unknown 2 47803449 GATGTTTTACTGTGCCTGGCTAACTATAGTCGAGGGGGTGATGGTCCTATGTGTCGCCCAG 780619951 212851 NM_000051.3(ATM):c.2413C>T (p.Arg805Ter) ATM Nov 08, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Ataxia-telangiectasia syndrome;Hereditary cancer-predisposing syndrome;not provided germline;unknown 11 108259022 CCAAATAAGATTGCATCTGGCTTTTTCCTGCGATTGTTAACATCAAAGCTAATGAATGACA 751772225 453537 NM_153717.2(EVC):c.1684C>T (p.Gln562Ter) EVC Mar 22, 2017 MedGen:C0013903,OMIM:225500,Orphanet:ORPHA289,SNOMED CT:62501005 Chondroectodermal dysplasia germline 4 5783672 GAAGAGTGTGACTACTTGAGGCAGGAAGTCCAGGAGAACGCTGCCTGGCAGCTGGGGAAGT 202236144 457208 NM_001277115.1(DNAH11):c.7279C>T (p.Gln2427Ter) DNAH11 Feb 28, 2017 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244 Ciliary dyskinesia germline 7 21725823 TTCTTTTGTTCTCCTTAGATTTCTGATTATCAAGCTGACTTCAGTCGGTGGTGGCAGAAAG 587780150 133454 NM_005732.3(RAD50):c.1393C>T (p.Gln465Ter) RAD50 Sep 15, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline 5 132589778 AATGAGCTGAAAAATGTGAAGTATGAATTACAGCAGTTGGAAGGATCTTCAGACAGGATTC 57077886 77785 NM_170707.3(LMNA):c.29C>T (p.Thr10Ile) LMNA Feb 18, 2016 MedGen:C1449563,OMIM:115200,Orphanet:ORPHA300751;MedGen:C1720860,OMIM:151660,Orphanet:ORPHA2348;MedGen:CN517202 Dilated cardiomyopathy 1A;Familial partial lipodystrophy 2;not provided germline 1 156114947 CCATGGAGACCCCGTCCCAGCGGCGCGCCACCCGCAGCGGGGCGCAGGCCAGCTCCACTCC 397514522 48122 NM_000359.2(TGM1):c.1744C>T (p.Gln582Ter) TGM1 Jan 18, 2013 MedGen:C3536797,OMIM:242300 Autosomal recessive congenital ichthyosis 1 germline 14 24255155 AACCGGGGCTCAGCGGAGGATGTGGCCATGCAGGTGGAGGCACAGGACGCGGTGATGGGGC 104893687 16944 NM_000060.4(BTD):c.235C>T (p.Arg79Cys) BTD Sep 28, 2016 MedGen:C0220754,OMIM:253260,Orphanet:ORPHA79241,SNOMED CT:8808004;MedGen:C0220754,OMIM:253260,Orphanet:ORPHA79241,SNOMED CT:8808004;MedGen:C0220754,OMIM:253260,Orphanet:ORPHA79241,SNOMED CT:8808004 Biotinidase deficiency;Biotinidase deficiency;Biotinidase deficiency germline;unknown 3 15635614 CTGAGTCTGAACCCTCTGGCTCTCATCAGCCGCCAAGAGGCCTTGGAGCTCATGAACCAGA 80356687 33899 NM_000083.2(CLCN1):c.803C>T (p.Thr268Met) CLCN1 Mar 23, 2016 MedGen:C0027127,Orphanet:ORPHA206973;MedGen:CN517202 Myotonia congenita;not provided germline 7 143324442 AGCAGCCATACTACTACTCTGATATCCTGACGGTGGGCTGTGCTGTGGGAGTCGGCTGTTG 398122364 94422 NM_052813.4(CARD9):c.301C>T (p.Arg101Cys) CARD9 Oct 31, 2013 MedGen:C1859353,OMIM:212050,Orphanet:ORPHA457088 Candidiasis, familial, 2 germline 9 136371345 TACAAGAAGGTCACAGGCAAGGAGCCGGCCCGCGTCTTCTCCATGATCATCGGTGAGTGAC 267607098 33451 NM_003849.3(SUCLG1):c.448C>T (p.Gln150Ter) SUCLG1 Oct 01, 2010 MedGen:C3151476,OMIM:245400,Orphanet:ORPHA17 Mitochondrial DNA depletion syndrome 9 (encephalomyopathic with methylmalonic aciduria) germline 2 84441330 GTTGTGTGTATCACTGAAGGAATTCCCCAGCAGGACATGGTACGAGTCAAGCACAAACTGC 397514733 75252 NM_003793.3(CTSF):c.1439C>T (p.Ser480Leu) CTSF Apr 01, 2013 MedGen:C3715049,OMIM:615362,Orphanet:ORPHA352709 Ceroid lipofuscinosis, neuronal, 13 germline 11 66563949 GGGCCTGTGGCGTGAACACCATGGCCAGCTCGGCGGTGGTGGACTGAAGAGGGGCCCCCAG -1 482120 NM_016239.3(MYO15A):c.10018C>T (p.Gln3340Ter) MYO15A Jan 16, 2018 MedGen:CN517202 not provided germline 17 18167659 CCGGCCAGCCGGCCCAGCGAGCAGCTGCTGCAGCAGGTGTCCAAGCTGGCTTCACTGCAGC 132630259 26221 NM_002621.2(CFP):c.298C>T (p.Arg100Trp) CFP Sep 01, 1995 MedGen:C1839455 Properdin deficiency, type II germline X 47628207 TCGGTGACGTGCTCTGAGGGCTCCCAGCTGCGGTACCGGCGCTGTGTGGGCTGGAATGGGC -1 485841 NM_000044.4(AR):c.2104C>T (p.Leu702Phe) AR Feb 17, 2015 MedGen:C0039585,OMIM:300068,SNOMED CT:12313004 Androgen resistance syndrome germline X 67711620 AACAACCAGCCCGACTCCTTTGCAGCCTTGCTCTCTAGCCTCAATGAACTGGGAGAGAGAC 879253881 244873 NM_001376.4(DYNC1H1):c.5884C>T (p.Arg1962Cys) DYNC1H1 Oct 03, 2015 MedGen:CN517202 not provided germline 14 102008244 GGTGCCTGGGGCTGCTTTGACGAGTTCAACCGCCTGGAGGAGCGGATGCTCTCGGCTGTGT 587777323 132607 NM_006302.2(MOGS):c.370C>T (p.Gln124Ter) MOGS Jan 12, 2015 MedGen:C1853736,OMIM:606056,Orphanet:ORPHA79330 Congenital disorder of glycosylation type 2B germline;unknown 2 74464705 ATTCTACCCCCAGGACTGATGTGGGCGCAGCAGGGCACCACCCCGGGGACTCCTAAGCTCA 139851890 187038 NM_000159.3(GCDH):c.416C>T (p.Ser139Leu) GCDH Apr 14, 2015 MedGen:C0268595,OMIM:231670,Orphanet:ORPHA25,SNOMED CT:360416003,SNOMED CT:76175005;MedGen:CN517202 Glutaric aciduria, type 1;not provided germline;unknown 19 12893564 AGCTGGAGCGGGTGGACAGTGGCTACAGGTCGGCGATGAGTGTCCAGTCCTCCCTCGTCAT 137853284 462961 NM_000053.3(ATP7B):c.2332C>T (p.Arg778Trp) ATP7B Jul 24, 2017 MedGen:C0019202,OMIM:277900,Orphanet:ORPHA905,SNOMED CT:88518009 Wilson disease germline 13 51958334 CCCATGCTCTTTGTGTTCATTGCCCTGGGCCGGTGGCTGGAACACTTGGCAAAGGTAACAG 886041951 264008 NM_000350.2(ABCA4):c.853C>T (p.Gln285Ter) ABCA4 Aug 30, 2016 MedGen:CN517202 not provided germline 1 94083357 GGAATATTATCTGATATGTCACCAAGAATTCAAGAGGTGAGTAGCCTGATGGTAGTAATTA 63750494 426829 NM_001171.5(ABCC6):c.3902C>T (p.Thr1301Ile) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16155012 ACCCCGGGCAGGTGGGCATCGTTGGCAGGACCGGGGCAGGGAAGTCCTCCCTGGCCAGTGG 727503949 177041 NM_000169.2(GLA):c.658C>T (p.Arg220Ter) GLA Jul 25, 2017 Human Phenotype Ontology:HP:0001071,MedGen:C0002986,OMIM:301500,Orphanet:ORPHA324,SNOMED CT:16652001 Fabry disease germline X 101398928 CTGTTTTCACAGCCCAATTATACAGAAATCCGACAGTACTGCAATCACTGGCGAAATTTTG 528583612 131956 NM_018297.3(NGLY1):c.1624C>T (p.Arg542Ter) NGLY1 Nov 21, 2017 MedGen:C3808991,OMIM:615273,Orphanet:ORPHA404454;MedGen:CN517202 Congenital disorder of deglycosylation;not provided germline 3 25720179 CATCCCTACTCCTTATAGGTATATTTGGCCCGAAAGGAAGGATCATCTTTTGCTTATATTT 200483245 422208 NM_000152.4(GAA):c.2269C>T (p.Gln757Ter) GAA Sep 03, 2015 MedGen:CN517202 not provided germline 17 80117047 GGGGAGGCCCTGCTCATCACCCCAGTGCTCCAGGCCGGGAAGGCCGAAGTGACTGGCTACT 757369748 389283 NM_024675.3(PALB2):c.106C>T (p.Gln36Ter) PALB2 Aug 19, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 16 23638072 AGGGAATACAGCAAGACACTAGCCCGCCTTCAGGTAAGTGAATCGTATTCTCAAATTAAGG 104894002 20258 NM_018965.3(TREM2):c.97C>T (p.Gln33Ter) TREM2 Mar 12, 2015 MedGen:C1857316,OMIM:221770 Polycystic lipomembranous osteodysplasia with sclerosing leukoencephalopathy germline 6 41161557 GTGTTCCAGGGCGTGGCGGGCCAGTCCCTGCAGGTGTCTTGCCCCTATGACTCCATGAAGC 1131690923 420710 NM_000455.4(STK11):c.640C>T (p.Gln214Ter) STK11 Nov 29, 2012 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 19 1220623 TTCGCGGCGGACGACACCTGCCGGACCAGCCAGGGCTCCCCGGCTTTCCAGCCGCCCGAGA 121918625 27929 NM_006920.4(SCN1A):c.2923C>T (p.Leu975Phe) SCN1A Dec 04, 2012 MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002 Severe myoclonic epilepsy in infancy germline 2 166036521 CATGTTTTTGTTGTTTTTAAGGTCCTGAATCTCTTTCTGGCCTTGCTTCTGAGCTCATTTA 192003551 192516 NM_020366.3(RPGRIP1):c.154C>T (p.Arg52Ter) RPGRIP1 Mar 18, 2016 MedGen:C2750720,OMIM:608194 Cone-rod dystrophy 13 germline 14 21294745 AACCGGGAGGAATTGGAGGACAGTTTCTTTCGACTTCGCGAAGATCACATGTTGGTGAAGG 121908556 20941 NM_000334.4(SCN4A):c.2023C>T (p.Arg675Trp) SCN4A Dec 14, 2004 MedGen:CN074266,OMIM:170500;MedGen:C1868433 Hyperkalemic Periodic Paralysis Type 1;Normokalemic periodic paralysis, potassium-sensitive germline 17 63957515 TTCACCCTTGCCCTCCCTGCTTGGCAGCTGCGGGTCTTCAAGCTGGCCAAGTCGTGGCCAA 267606672 26834 NM_000052.6(ATP7A):c.4156C>T (p.Pro1386Ser) ATP7A Mar 12, 2010 MedGen:C1845359,OMIM:300489,Orphanet:ORPHA139557 Distal spinal muscular atrophy, X-linked 3 germline X 78045502 GTTTTTATGCCCATTGGTTTGGTTTTGCAGCCCTGGATGGGATCTGCAGCAATGGCTGCTT 779990936 216037 NM_000255.3(MUT):c.2179C>T (p.Arg727Ter) MUT Aug 04, 2017 MedGen:C1855114,OMIM:251000 Methylmalonic aciduria due to methylmalonyl-CoA mutase deficiency germline 6 49431802 GGTGTTTCCAATGTATTTGGTCCTGGGACTCGAATTCCAAAGGCTGCCGTTCAGGTGCTTG 387906884 39368 NM_002334.3(LRP4):c.3508C>T (p.Arg1170Trp) LRP4 Apr 01, 2014 MedGen:C3280402,OMIM:614305 Sclerosteosis 2 germline 11 46876494 GTGTTGGTGTGGCAGAACCTTGACAGTCCCCGGGCCATCGTACTGTACCATGAGATGGGGT 63751109 32118 NM_000249.3(MLH1):c.131C>T (p.Ser44Phe) MLH1 Sep 05, 2013 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:C1333991,OMIM:609310 Lynch syndrome;Lynch syndrome II germline 3 36996633 CTGTTTGATTTGCCAGTTTAGATGCAAAATCCACAAGTATTCAAGTGATTGTTAAAGAGGG 5030730 26322 NM_004006.2(DMD):c.3940C>T (p.Arg1314Ter) DMD Mar 25, 2014 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001;MedGen:CN517202 Becker muscular dystrophy;Duchenne muscular dystrophy;not provided germline X 32438372 AATGTGTTTCAGTCACTTGAAAATTTGATGCGACATTCAGAGGATAACCCAAATCAGATTC 121918368 16860 NM_016302.3(CRBN):c.1255C>T (p.Arg419Ter) CRBN Oct 11, 2013 MedGen:C1843942,OMIM:607417 Mental retardation, autosomal recessive 2 germline 3 3150939 ATGTCACCTCAAAAATTTTGGGGCTTAACGCGATCTGCTCTGTTGCCCACGATCCCAGACA 104894591 16600 NM_000263.3(NAGLU):c.1876C>T (p.Arg626Ter) NAGLU Dec 19, 2013 MedGen:C0086648,OMIM:252920,Orphanet:ORPHA79270,SNOMED CT:59990008;MedGen:CN517202 Mucopolysaccharidosis, MPS-III-B;not provided germline 17 42543882 TTCTTGCTGGGCAGCTGGCTAGAGCAGGCCCGAGCAGCGGCAGTCAGTGAGGCCGAGGCCG 28940869 19031 NM_017739.3(POMGNT1):c.1324C>T (p.Arg442Cys) POMGNT1 May 11, 2017 na;MedGen:C0457133,OMIM:253280,Orphanet:ORPHA588,SNOMED CT:277950001;MedGen:CN517202 Congenital muscular dystrophy-dystroglycanopathy with brain and eye anomalies, type A3;Muscle eye brain disease;not provided germline 1 46192397 CACACGGCTGAGGACCCAGCACTACTGTACCGTGTGGAGACCATGCCTGGGCTGGGCTGGG 587783159 166546 NM_003159.2(CDKL5):c.2671C>T (p.Gln891Ter) CDKL5 Jun 10, 2014 MedGen:CN517202 not provided germline X 18628545 CAGGCCTCTGGCGGGAGCAGCAACATCCGGCAGGAACCCGCACCGAAGGGCAGGCCAGCCC 267608252 47476 NM_000288.3(PEX7):c.-45C>T PEX7 Sep 13, 2012 Gene:8024,MedGen:C0034960,OMIM:266500,Orphanet:ORPHA773,SNOMED CT:25362006 Phytanic acid storage disease not provided 6 136822621 TAACCGCGCCAGTGTGCCTCCGACTCGGAACGGCTTCCGCGGCCGGGGCAGCGAGGGCCGG 797044726 194257 NM_000033.3(ABCD1):c.1288C>T (p.Gln430Ter) ABCD1 Oct 13, 2014 MedGen:C0162309,OMIM:300100,Orphanet:ORPHA43,SNOMED CT:65389002 Adrenoleukodystrophy germline X 153736408 CACGAGATGTTCCAGGTATTTGAAGATGTTCAGCGCTGTCACTTCAAGAGGCCCAGGGAGC 72653777 426993 NM_001171.5(ABCC6):c.1798C>T (p.Arg600Cys) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16187193 CGGTTTTCCTAGGCCCGGGTGTCCTTTGACCGTCTGGTCACCTTCCTCTGCCTGGAAGAAG 397514418 36417 NM_000060.4(BTD):c.1339C>T (p.His447Tyr) BTD Dec 04, 2012 MedGen:C0220754,OMIM:253260,Orphanet:ORPHA79241,SNOMED CT:8808004 Biotinidase deficiency not provided 3 15645195 CTGTATGCCCTGGGGGTCTTTGATGGGCTTCACACAGTACATGGCACTTACTACATCCAAG 72547528 17245 NM_024006.5(VKORC1):c.292C>T (p.Arg98Trp) VKORC1 Feb 05, 2004 MedGen:C1843832,OMIM:607473 Vitamin k-dependent clotting factors, combined deficiency of, 2 germline 16 31091334 CGGACCCTCTTCTGCCTTGCAGGTTGCCTGCGGACACGCTGGGCCTCTGTCCTGATGCTGC 137852357 25135 NM_000132.3(F8):c.6496C>T (p.Arg2166Ter) F8 May 01, 1988 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154863161 CACAATATTTTTAACCCTCCAATTATTGCTCGATACATCCGTTTGCACCCAACTCATTATA 118204094 16484 NM_000190.3(HMBS):c.346C>T (p.Arg116Trp) HMBS Mar 01, 1993 MedGen:C0162565,OMIM:176000,Orphanet:ORPHA79276,SNOMED CT:234422006 Acute intermittent porphyria germline 11 119089991 TCATTCTGTGCCCTTCCCTCCTCCCCCAGGCGGGAAAACCCTCATGATGCTGTTGTCTTTC 730880635 179340 NM_000256.3(MYBPC3):c.1120C>T (p.Gln374Ter) MYBPC3 Mar 12, 2012 MedGen:CN517202 not provided germline 11 47343595 GCCTTTCAGAAGAAGCTGGAGCCGGCCTACCAGGTGAGCAAAGGCCACAAGATCCGGCTGA 137852417 25262 NM_000132.3(F8):c.1648C>T (p.Arg550Cys) F8 Jul 01, 1992 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154957061 CCAACTAAATCAGATCCTCGGTGCCTGACCCGCTATTACTCTAGTTTCGTTAATATGGAGA 797045378 209278 NM_000052.6(ATP7A):c.3466C>T (p.Gln1156Ter) ATP7A Feb 08, 2013 MedGen:C0022716,OMIM:309400,Orphanet:ORPHA565,SNOMED CT:59178007 Menkes kinky-hair syndrome germline X 78033776 TCCCTGGTTCAAATTGATGCCAGTAATGAACAGTCATCAACTTCGTCTTCCATGATTATTG 1057520742 379504 NM_001399.4(EDA):c.617C>T (p.Pro206Leu) EDA Aug 12, 2016 MedGen:C0162359,OMIM:305100,SNOMED CT:239007005;MedGen:CN517202 Hypohidrotic X-linked ectodermal dysplasia;not provided germline X 70027947 CCCAGGGACCCCCAGGAATTCCAGGGATTCCTGGAATTCCAGGAACAACTGTTATGGGACC 118203549 57966 NM_000368.4(TSC1):c.1579C>T (p.Gln527Ter) TSC1 Dec 05, 2017 MedGen:C0005684,OMIM:109800,Orphanet:ORPHA157980,SNOMED CT:399326009;MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000;MedGen:CN517202 Malignant tumor of urinary bladder;Tuberous sclerosis syndrome;not provided germline 9 132905999 CGGAAGACCCACTCGGCAGCCTCCAGTTCTCAGGGCGCCAGCGTGAACCCTGAGCCTTTAC -1 434104 NM_019066.4(MAGEL2):c.1621C>T (p.Gln541Ter) MAGEL2 Sep 26, 2017 MedGen:C3809877,OMIM:615547,Orphanet:ORPHA398069 Schaaf-yang syndrome germline 15 23646122 CTGCCGGCCCCGCAGGTGCAGGCGGCGCCGCAGGTGCCTACGGCCCCACCTGCTACGCAGG 1064794062 408525 NM_000192.3(TBX5):c.1078C>T (p.Gln360Ter) TBX5 Aug 31, 2015 MedGen:CN517202 not provided germline 12 114356011 GAAGATTCCTTCTACCGCTCTAGCTATCCACAGCAGCAGGGCCTGGGTGCCTCCTACAGGA 104893956 31631 NM_001122742.1(ESR1):c.469C>T (p.Arg157Ter) ESR1 Oct 20, 1994 MedGen:C1851467,OMIM:615363 Estrogen resistance germline 6 151842613 TTTTTTCCCCCCAGGCCAAATTCAGATAATCGACGCCAGGGTGGCAGAGAAAGATTGGCCA 886038795 258815 NM_000138.4(FBN1):c.8488C>T (p.Gln2830Ter) FBN1 Sep 24, 2012 MedGen:CN118826,Orphanet:ORPHA91387 Thoracic aortic aneurysm and aortic dissection germline 15 48411118 AAGAAGCCAGTGGCTGGAACCTATTCATTACAAATCAGTAGTACTCCACTTTATAAAAAGA 201431517 48426 NM_139242.3(MTFMT):c.626C>T (p.Ser209Leu) MTFMT Oct 31, 2017 Human Phenotype Ontology:HP:0001999,MedGen:C0424503;MedGen:C3554182,OMIM:614947,Orphanet:ORPHA319524;Human Phenotype Ontology:HP:0003688,MedGen:C4021724;Human Phenotype Ontology:HP:0011923,MedGen:C4020739;Human Phenotype Ontology:HP:0006915,MedGen:C1859200;MedGen:C0023264,OMIM:256000,Orphanet:ORPHA506,SNOMED CT:29570005;MedGen:C1838951;Human Phenotype Ontology:HP:0002465,MedGen:C1848207;Human Phenotype Ontology:HP:0004322,MedGen:C0349588;MedGen:CN517202 Abnormal facial shape;Combined oxidative phosphorylation deficiency 15;Decreased activity of cytochrome C oxidase in muscle tissue;Decreased activity of mitochondrial complex I;Inability to walk by childhood/adolescence;Leigh syndrome;Leigh syndrome due to mitochondrial complex I deficiency;Poor speech;Short stature;not provided germline;maternal;unknown 15 65021533 GCACTGCAAAGGAATTGGAAGCAGTGTTGTCAAGACTGGGTGCCAACATGGTATAATTCCC 5030813 272986 NM_000551.3(VHL):c.394C>T (p.Gln132Ter) VHL Jun 30, 2016 MedGen:C0019562,OMIM:193300,Orphanet:ORPHA892,SNOMED CT:46659004 Von Hippel-Lindau syndrome germline 3 10146567 GCAGGGACACACGATGGGCTTCTGGTTAACCAAACTGAATTATTTGTGCCATCTCTCAATG 886040549 261256 NM_000059.3(BRCA2):c.4783C>T (p.Gln1595Ter) BRCA2 Oct 18, 2016 MedGen:C2675520,OMIM:612555 Breast-ovarian cancer, familial 2 germline 13 32339138 ATCACAGCTGCCCCAAAGTGTAAAGAAATGCAGAATTCTCTCAATAATGATAAAAACCTTG 761533681 359063 NM_003038.4(SLC1A4):c.1369C>T (p.Arg457Trp) SLC1A4 Apr 10, 2017 MedGen:C4225254,OMIM:616657,Orphanet:ORPHA447997;MedGen:CN517202 Spastic tetraplegia, thin corpus callosum, and progressive microcephaly;not provided germline 2 65020916 ATAGCTGCCTCTTCTTTTCCCACCAGGGACCGGACCACCACGGTGGTGAATGTGGAAGGGG 267607143 20038 NM_021625.4(TRPV4):c.943C>T (p.Arg315Trp) TRPV4 Sep 08, 2017 MedGen:C0007959,Orphanet:ORPHA166,SNOMED CT:50548001;MedGen:C2079540,OMIM:606071;Gene:8094,MedGen:C1838492,OMIM:600175,Orphanet:ORPHA1216;MedGen:C0027868,Orphanet:ORPHA68381;MedGen:C0751335,OMIM:181405,Orphanet:ORPHA431255,SNOMED CT:230248006;MedGen:CN517202 Charcot-Marie-Tooth disease;Charcot-Marie-Tooth disease type 2C;Distal spinal muscular atrophy, congenital nonprogressive;Neuromuscular Diseases;Scapuloperoneal spinal muscular atrophy;not provided germline 12 109798823 ACGGAGAACCCCCACAAGAAGGCGGACATGCGGCGCCAGGACTCGCGAGGCAACACAGTGC 121918248 16916 NM_000255.3(MUT):c.52C>T (p.Gln18Ter) MUT Dec 01, 2016 MedGen:C1855115;MedGen:C1855114,OMIM:251000 METHYLMALONIC ACIDURIA, mut(0) TYPE;Methylmalonic aciduria due to methylmalonyl-CoA mutase deficiency germline 6 49459415 CTTTTTTTACTTTCACCTCATTACCTGAGGCAGGTAAAAGAATCATCAGGCTCCAGGCTCA 1060500308 401707 NM_000267.3(NF1):c.3763C>T (p.Gln1255Ter) NF1 Apr 05, 2017 MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003;MedGen:CN517202 Neurofibromatosis, type 1;not provided germline 17 31235665 ACTCTGTTTGATTCTCGGCATTTACTCTACCAACTGCTCTGGAACATGTTTTCTAAAGAAG 796052086 200677 NM_138413.3(HOGA1):c.763C>T (p.Arg255Ter) HOGA1 Nov 27, 2014 MedGen:C3150878,OMIM:613616,Orphanet:ORPHA93600 Primary hyperoxaluria, type III germline 10 97601919 GTCCTGGGGGCTCAGGTGTGCCAGCTGGAGCGACTGTGCTGCACGGGGCAATGGGAAGATG 769222264 260128 NM_004483.4(GCSH):c.226C>T (p.Gln76Ter) GCSH Aug 23, 2016 MedGen:CN517202 not provided germline 16 81090603 ATTGGAACAGTGGGAATCAGCAATTTTGCACAGGTATTGGATTATATTGAAATATTTGTCC 886041584 264019 NM_020451.2(SELENON):c.1090C>T (p.Gln364Ter) SELENON Mar 30, 2016 MedGen:CN517202 not provided germline 1 25811533 AACATGGAGGTGGACATCGGCTACATACCCCAGGTGAGCGCACAGGAGGCTCCCATCCAGG 121965025 26956 NM_000203.4(IDUA):c.1861C>T (p.Arg621Ter) IDUA Jun 01, 1994 Human Phenotype Ontology:HP:0000943,MedGen:C0086795,OMIM:607014,Orphanet:ORPHA93473 Hurler syndrome germline 4 1004292 ACAGGTGCTGTCTCTGGCTCCTACCGAGTTCGAGCCCTGGACTACTGGGCCCGACCAGGCC 886041422 264930 NM_001271043.2(NFIX):c.661C>T (p.Gln221Ter) NFIX May 22, 2017 MedGen:CN517202 not provided germline 19 13073436 CCTTTCCCCTCTTCAGGGCACTTAAGTTTCCAGGACTGTTTTGTGACTTCCGGGGTCTGGA 727502791 171907 NM_003480.3(MFAP5):c.472C>T (p.Arg158Ter) MFAP5 Dec 04, 2014 MedGen:C4015368,OMIM:616166 Aortic aneurysm, familial thoracic 9 germline 12 8648141 CCTAGGAGACTCCGTCGCTCCAATTACTTCCGACTTCCTCCCTGTGAAAATGTGGATTTGC 528165789 259952 NM_000051.3(ATM):c.1960C>T (p.Gln654Ter) ATM Sep 08, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline 11 108253875 TCATTCTCAGAAGTAGAAGAACTATTTCTTCAGACAACTTTTGACAAGATGGACTTTTTAA 771874163 200332 NM_000018.3(ACADVL):c.1096C>T (p.Arg366Cys) ACADVL Feb 08, 2017 MedGen:CN517202;MedGen:CN169374 not provided;not specified germline 17 7223151 ACCCTCTTCCAGGTAGATCATGCCACTAATCGTACCCAGTTTGGGGAGAAAATTCACAACT 121913026 31831 NM_000400.3(ERCC2):c.2164C>T (p.Arg722Trp) ERCC2 Aug 21, 2017 MedGen:C1866504,OMIM:601675;MedGen:CN517202 Trichothiodystrophy 1, photosensitive;not provided germline 19 45352235 GAGGGTGTCCAGGTGGCCAAGTACTTCCTGCGGCAGATGGCACAGCCCTTCCACCGGGTGA 375009168 167376 NM_023073.3(CPLANE1):c.3380C>T (p.Ser1127Leu) CPLANE1 Mar 22, 2017 MedGen:C3553264,OMIM:614615;MedGen:C2745997,OMIM:277170,Orphanet:ORPHA2754;MedGen:CN517202 Joubert syndrome 17;Orofaciodigital syndrome 6;not provided germline 5 37201718 CATCAGTTATGGCCGATGCAGATATTCTTTCGGAGACATTTCAACTTCTGATAGACTCTGC 137852473 25372 NM_000132.3(F8):c.6967C>T (p.Arg2323Cys) F8 Apr 01, 1992 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154837686 GTGAACTCTCTAGACCCACCGTTACTGACTCGCTACCTTCGAATTCACCCCCAGAGTTGGG 61750645 105327 NM_000350.2(ABCA4):c.6229C>T (p.Arg2077Trp) ABCA4 Jan 01, 2016 Human Phenotype Ontology:HP:0000556,MedGen:C0854723,Orphanet:ORPHA71862,SNOMED CT:314407005;MedGen:C1866422,OMIM:601718;MeSH:C535804,MedGen:C1855465,OMIM:248200;MedGen:CN517202 Retinal dystrophy;Retinitis pigmentosa 19;Stargardt disease 1;not provided germline;unknown 1 94001911 CTGGCTGGCACGTACAGTGGGGGCAACAAGCGGAAACTCTCCACAGCCATCGCACTCATTG 281864784 49815 NM_212472.2(PRKAR1A):c.682C>T (p.Arg228Ter) PRKAR1A Sep 20, 2012 MedGen:C2607929,OMIM:160980 Carney complex, type 1 not provided 17 68525886 AAGACAAATGTGAAATTGTGGGGCATCGACCGAGACAGCTATAGAAGAATCCTCATGGTAA 527236152 152921 NM_001194958.2(KCNJ18):c.419C>T (p.Thr140Met) KCNJ18 Jul 31, 2014 MedGen:C0268446,OMIM:188580,Orphanet:ORPHA79102,SNOMED CT:30967002 Thyrotoxic periodic paralysis germline 17 21703205 TCATGGCGGCCTTCCTCTTCTCCATCGAGACGCAGACCACCATCGGCTACGGGCTGCGCTG 397507758 66435 NM_000059.3(BRCA2):c.5101C>T (p.Gln1701Ter) BRCA2 Sep 06, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145;MedGen:CN517202 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome;not provided germline 13 32339456 AAATGGCTTAGAGAAGGAATATTTGATGGTCAACCAGAAAGAATAAATACTGCAGATTATG -1 445047 NM_005554.3(KRT6A):c.490C>T (p.Arg164Cys) KRT6A Sep 25, 2017 MedGen:CN517202 not provided germline 12 52492699 CCCACCATCCAGCGGGTGCGGGCTGAGGAGCGTGAACAGATCAAGACCCTCAACAACAAGT 1057516047 353890 NM_020458.3(TTC7A):c.2470C>T (p.Gln824Ter) TTC7A Sep 17, 2015 MedGen:C0220744,OMIM:243150,Orphanet:ORPHA436252,SNOMED CT:95472001 Multiple gastrointestinal atresias inherited 2 47073816 GAGGCGTGGCAGGGCCTGGGCGAGGTGCTGCAGGCCCAGGGCCAGAACGAGGCTGCCGTTG 786205227 188141 NM_014225.5(PPP2R1A):c.544C>T (p.Arg182Trp) PPP2R1A Nov 08, 2017 MedGen:C4225352,OMIM:616362,Orphanet:ORPHA457284;MedGen:CN517202 Mental retardation, autosomal dominant 36;not provided de novo;germline 19 52212726 AACCTGTGCTCAGATGACACCCCCATGGTGCGGCGGGCCGCAGCCTCCAAGCTGGGGGAGT 41542214 180157 NM_000249.3(MLH1):c.2065C>T (p.Gln689Ter) MLH1 Mar 10, 2017 MedGen:C0009405,Orphanet:ORPHA443090;MedGen:CN517202 Hereditary nonpolyposis colon cancer;not provided germline 3 37048979 GAATGCGCTATGTTCTATTCCATCCGGAAGCAGTACATATCTGAGGAGTCGACCCTCTCAG 267607177 15082 NM_001083961.1(WDR62):c.1408C>T (p.Gln470Ter) WDR62 Sep 09, 2010 MedGen:C1858535,OMIM:604317 Primary autosomal recessive microcephaly 2 germline 19 36083099 CTGAAGGTCGTGTACGTGGAGAATGACATCCAGCACCTGCAGGACATGTCACACTTCCCAG 104894162 31662 NM_001002295.1(GATA3):c.829C>T (p.Arg277Ter) GATA3 Jul 27, 2000 MedGen:C1840333,OMIM:146255,Orphanet:ORPHA2237 Barakat syndrome germline 10 8064043 TGTGGGGCAACCTCGACCCCACTGTGGCGGCGAGATGGCACGGGACACTACCTGTGCAACG 74315337 22994 NM_000261.1(MYOC):c.136C>T (p.Arg46Ter) MYOC Jun 01, 1999 MedGen:C4016749 Glaucoma 1, open angle, a, autosomal recessive germline 1 171652476 CAGCTCAGGAAGGCCAATGACCAGAGTGGCCGATGCCAGTATACCTTCAGTGTGGCCAGTC 182812968 99222 NM_000543.4(SMPD1):c.1426C>T (p.Arg476Trp) SMPD1 Jun 18, 2015 MedGen:C0268242,OMIM:257200,Orphanet:ORPHA77292,SNOMED CT:52165006;MedGen:C0268243,OMIM:607616,Orphanet:ORPHA77293,SNOMED CT:39390005;MedGen:C0268243,OMIM:607616,Orphanet:ORPHA77293,SNOMED CT:39390005;MedGen:C0028064,SNOMED CT:58459009 Niemann-Pick disease, type A;Niemann-Pick disease, type B;Niemann-Pick disease, type B;Sphingomyelin/cholesterol lipidosis germline;unknown 11 6393981 GAGGTCTTCTATGATGAAGAGACTCTGAGCCGGCCGCTGGCTGTAGCCTTCCTGGCACCCA 786204321 186313 NM_000251.2(MSH2):c.1984C>T (p.Gln662Ter) MSH2 May 19, 2016 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:CN517202 Lynch syndrome;not provided germline 2 47475249 CCTAATGACGTATACTTTGAAAAAGATAAACAGATGTTCCACATCATTACTGGTAAAAAAC 132630321 26087 NM_001399.4(EDA):c.1013C>T (p.Thr338Met) EDA Nov 01, 2008 MedGen:C1970757,OMIM:313500 Tooth agenesis, selective, X-linked, 1 germline X 70035446 CCTTCCTGCAGTGCACACGCAGCATCGAGACGGGCAAGACCAACTACAACACTTGCTATAC 185089786 39895 NM_024753.4(TTC21B):c.1231C>T (p.Arg411Ter) TTC21B Mar 01, 2011 MedGen:C3151185,OMIM:613819 Asphyxiating thoracic dystrophy 4 germline 2 165929290 CATGCAGTTCTTGCCATGAAGAAAAATAAACGACAAGAAGAAGTTATTAATTTGTTAAATG -1 429203 NM_000352.4(ABCC8):c.3593C>T (p.Pro1198Leu) ABCC8 Jan 20, 2016 MedGen:C1833104,OMIM:606176,Orphanet:ORPHA99885 Permanent neonatal diabetes mellitus germline 11 17402718 TGCAGCAGCTGGATGACACCACCCAGCTTCCACTTCTCTCACACTTTGCCGAAACCGTAGA 199775294 187112 NM_002310.5(LIFR):c.2074C>T (p.Arg692Ter) LIFR Sep 01, 2014 MedGen:C0796176,OMIM:601559,Orphanet:ORPHA3206 Stuve-Wiedemann syndrome germline 5 38490283 TGCTGATATGTTCATCCTATAGATGAGTTTCGACCAGGTATAAGATATAATTTTTTCCTGT 200564757 48332 NM_001271885.1(AAGAB):c.43C>T (p.Arg15Ter) AAGAB Oct 05, 2012 Gene:619540,MedGen:C1835662,OMIM:148600 Keratosis palmoplantaris papulosa germline 15 67236060 ATTCTTTTGCATATTATTTTAGGTATAAACCGACAAAAAGCTCAAGAATGGTGCATCAAAC 529232938 125792 NM_032861.3(SERAC1):c.202C>T (p.Arg68Ter) SERAC1 Sep 01, 2013 MedGen:C3553597,OMIM:614739,Orphanet:ORPHA352328 3-methylglutaconic aciduria with deafness, encephalopathy, and Leigh-like syndrome germline 6 158150516 GCTGTGACATTAGATACTCAAGTGGTAGAACGAGAAAAAATGAAGTCATATATATATGTGC 28937890 19548 NM_006005.3(WFS1):c.2171C>T (p.Pro724Leu) WFS1 Oct 01, 1998 MedGen:C0043207,OMIM:222300,Orphanet:ORPHA3463,SNOMED CT:70694009 Diabetes mellitus AND insipidus with optic atrophy AND deafness germline 4 6301966 ACAGCGCCGAGTCTGCCATCAACATGCTCCCGTTCTTCATCGGCGACTGGATGCGCTGCCT 387907260 45676 NM_153033.4(KCTD7):c.280C>T (p.Arg94Trp) KCTD7 Aug 22, 2012 MedGen:C2673257,OMIM:611726,Orphanet:ORPHA263516 Epilepsy, progressive myoclonic 3 germline 7 66633410 CGGCACTACATCCCCACGGACTCCGAGGGCCGGTACTTCATCGACCGAGATGGCACACACT 397518021 57705 NM_206933.2(USH2A):c.5788C>T (p.Arg1930Ter) USH2A Apr 13, 2010 MedGen:C1848634,OMIM:276901 Usher syndrome, type 2A germline 1 216072958 CATCTTATTTCCATTTAAGAATACCTGTATCGAGTGATAGCCTCGCATGAAGGAGGTTCAG 312262851 49568 NM_003611.2(OFD1):c.823C>T (p.Gln275Ter) OFD1 Feb 28, 2013 MedGen:C1510460,OMIM:311200,Orphanet:ORPHA2750,SNOMED CT:52868006 Oral-facial-digital syndrome not provided X 13746948 AAGAGTACCCTTGAAAGAATTCACAAGCACCAAGAGGTGGTATTTACAAATATTTTATGGG 118203961 16176 NM_001142617.1(STRA6):c.269C>T (p.Pro90Leu) STRA6 Mar 01, 2007 MedGen:C1832661,OMIM:601186,Orphanet:ORPHA2470 Microphthalmia syndromic 9 germline 15 74196145 TCCTGCCCTGTCCTTGCCTCTGTGCTAGCCCTGTGGATTTCTTGGCTGGGGACAGGCCCCG 730880538 179318 NM_000256.3(MYBPC3):c.1387C>T (p.Gln463Ter) MYBPC3 Feb 08, 2013 MedGen:CN517202 not provided germline 11 47342900 CCTGTGCTCATCACGCGCCCCTTGGAGGACCAGCTGGTGATGGTGGGGCAGCGGGTGGAGT 387906877 39357 NM_004247.3(EFTUD2):c.784C>T (p.Arg262Trp) EFTUD2 Nov 07, 2014 MedGen:C1864652,OMIM:610536,Orphanet:ORPHA79113 Growth and mental retardation, mandibulofacial dysostosis, microcephaly, and cleft palate germline 17 44876019 GCAGTCACTGTGTGCATCAACAAGATTGACCGGCTGATCCTGGAGCTGAAGCTGCCTCCAA 587783906 168361 NM_133433.3(NIPBL):c.2494C>T (p.Arg832Ter) NIPBL Feb 08, 2013 MedGen:CN029798,OMIM:122470 Cornelia de Lange syndrome 1 germline 5 36985674 CAAAAATCAGATGACAGGGGTGAATCAGAGCGACATCGAGGGGATCAGTCTAGGGTTCGAA 587776970 59545 NM_001145438.2(PGAP2):c.479C>T (p.Thr160Ile) PGAP2 Apr 04, 2013 Gene:100689013,MedGen:C3280153,OMIM:614207 Hyperphosphatasia with mental retardation syndrome 3 germline 11 3824025 TCGCCTACTGGAACCACTACCTCAGCTGCACCTCCCCGTGTTCCTGCTATCGCCCGCTCTG 746068882 420432 NM_014804.2(KIAA0753):c.970C>T (p.Arg324Ter) KIAA0753 Jun 21, 2017 MedGen:C0265275,Orphanet:ORPHA474,SNOMED CT:75049004;Human Phenotype Ontology:HP:0002335,MedGen:C0431399,Orphanet:ORPHA475,SNOMED CT:253175003,SNOMED CT:716997004 Jeune thoracic dystrophy;Joubert syndrome inherited 17 6623016 TTACAGATGTTTGTCACTCAGTTTACTGACCGAGGGGAGCATCCACTTCCTGCTCGGTGTA 1057517697 359182 NM_181783.3(TMTC3):c.2617C>T (p.Gln873Ter) TMTC3 Dec 17, 2016 MedGen:C4310646,OMIM:617255 Lissencephaly 8 germline 12 88195521 GATAATAAAAGTCAGTCTAAATCCAACAAACAATTAGGAAAAAATGGAGACGAAGAGACAC 386134222 36759 NM_003060.3(SLC22A5):c.1409C>T (p.Ser470Phe) SLC22A5 Jun 19, 2017 MedGen:C0342788,OMIM:212140,Orphanet:ORPHA158,SNOMED CT:21764004;MedGen:CN517202 Renal carnitine transport defect;not provided germline 5 132392574 ACATGGGTGTGGGAGTCAGCTCCACAGCATCCCGCCTGGGCAGCATCCTGTCTCCCTACTT 137852717 76636 NM_024757.4(EHMT1):c.1810C>T (p.Gln604Ter) EHMT1 Oct 05, 2010 MedGen:C0795833,OMIM:610253,Orphanet:ORPHA261494 Chromosome 9q deletion syndrome not provided 9 137776636 TCCCATTTTTAGGGTAATTTTATGGAGTGTCAGCCCGAGAGCAGCATCTCTCACCGTTTCC 369776766 455904 NM_000426.3(LAMA2):c.4876C>T (p.Gln1626Ter) LAMA2 Mar 26, 2017 MedGen:CN117977 Laminin alpha 2-related dystrophy germline 6 129369907 TGGAATCTTTTTCAGCACTTGCTGTCACCTCAGCGGGCCCCAGAGAGGCTTATTCAGCTGG 886039789 260550 NM_012343.3(NNT):c.385C>T (p.Arg129Ter) NNT Oct 11, 2016 MedGen:C3553587,OMIM:614736 Glucocorticoid deficiency 4 with or without mineralocorticoid deficiency germline 5 43615851 TAATCTGTGACTTGATTTTTTCCCCAGGTGCGAGCCCCTATGGTTAATCCAACATTAGGTG 119103274 17285 NM_000433.3(NCF2):c.383C>T (p.Ala128Val) NCF2 Nov 01, 1999 MedGen:C1856245,OMIM:233710 Chronic granulomatous disease, autosomal recessive cytochrome b-positive, type 2 germline 1 183574605 CTGTACTTTTCTAGGTGTTATATAACATTGCTTTCATGTATGCCAAGAAGGAGGAATGGAA 886039327 260076 NM_014985.3(CEP152):c.2038C>T (p.Gln680Ter) CEP152 Mar 30, 2015 MedGen:CN517202 not provided germline 15 48767444 TCTGTTTCCAGGTGTGAAAGGACTTATCAGCAGCACCATGAAGCCATGAAAACTCAAATAC 28937906 19234 NM_018972.2(GDAP1):c.844C>T (p.Arg282Cys) GDAP1 Jan 11, 2016 MedGen:C1842197,OMIM:608340,Orphanet:ORPHA217055;MedGen:CN517202 Charcot-Marie-Tooth disease, recessive intermediate A;not provided germline 8 74364134 AAGCGACCAAACTTGGAAACCTATTACGAGCGTGTCTTGAAGAGAAAAACATTTAACAAGG 875989892 228123 NM_000527.4(LDLR):c.251C>T (p.Pro84Leu) LDLR Mar 25, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11102724 GCTGTGGGGGCCGTGTCAACCGCTGCATTCCTCAGTTCTGGAGGTGCGATGGCCAAGTGGA 121908288 16762 NM_014845.5(FIG4):c.547C>T (p.Arg183Ter) FIG4 Jun 17, 2015 MedGen:C2675491,OMIM:612577;MedGen:C1970011,OMIM:611228,Orphanet:ORPHA139515;MedGen:CN517202 Amyotrophic lateral sclerosis type 11;Charcot-Marie-Tooth disease, type 4J;not provided germline 6 109735199 CACTCACTTCAATATAATCTCACTGTCTTGCGAATGCCCCTGGAGATGTTAAAGTCAGAAA 749472361 186875 NM_000053.3(ATP7B):c.3895C>T (p.Leu1299Phe) ATP7B Jul 27, 2017 MedGen:C0019202,OMIM:277900,Orphanet:ORPHA905,SNOMED CT:88518009 Wilson disease germline;unknown 13 51937484 GATGTGGCCATCGAGGCAGCCGACGTCGTCCTTATCAGAGTGAGCGTGGCTGCAGCCAGGC 863225021 213811 NM_003494.3(DYSF):c.5077C>T (p.Arg1693Trp) DYSF May 23, 2017 MedGen:C2931687,Orphanet:ORPHA207073;MedGen:C1850889,OMIM:253601,Orphanet:ORPHA268;MedGen:C1850808,OMIM:254130,Orphanet:ORPHA45448 Dysferlinopathy;Limb-girdle muscular dystrophy, type 2B;Miyoshi muscular dystrophy 1 germline 2 71665181 TTGCTCCTCAGCTCTGGACCGAACCAGTGGCGGGACCAGCTCCGCCCCTCCCAGCTCCTCC 122462165 26472 NM_003413.3(ZIC3):c.968C>T (p.Thr323Met) ZIC3 Nov 01, 1997 MedGen:C1844020,OMIM:306955 Heterotaxy, visceral, X-linked germline X 137567659 ACAAACTGGTCAACCACATCCGAGTGCACACGGGCGAGAAGCCCTTCCCATGCCCCTTCCC -1 454389 NM_000038.5(APC):c.3184C>T (p.Gln1062Ter) APC May 25, 2017 MedGen:C2713442,OMIM:175100 Familial adenomatous polyposis 1 germline 5 112838778 CCCAAACACATAATAGAAGATGAAATAAAACAAAGTGAGCAAAGACAATCAAGGAATCAAA 879255516 94227 NM_006565.3(CTCF):c.1699C>T (p.Arg567Trp) CTCF Apr 01, 2016 MedGen:C3809686,OMIM:615502,Orphanet:ORPHA363611;MedGen:CN517202 Mental retardation, autosomal dominant 21;not provided germline 16 67628550 TGTTCTAAGTGTGGGAAAACATTTACACGTCGGGTAAGGGTCAGAACTTCACTTTGCCTGT 137852237 25623 NM_000133.3(F9):c.571C>T (p.Arg191Cys) F9 Aug 01, 1989 MedGen:C0008533,OMIM:306900,Orphanet:ORPHA98879,SNOMED CT:41788008 Hereditary factor IX deficiency disease germline X 139551112 GTTTCTGTTTCACAAACTTCTAAGCTCACCCGTGCTGAGACTGTTTTTCCTGATGTGGACT 104894319 22616 NM_003356.3(UCP3):c.427C>T (p.Arg143Ter) UCP3 Oct 01, 1998 MedGen:C4016768 Obesity, severe, and type II diabetes germline 11 74005844 TGTGCCCAGCCCACAGATGTGGTGAAGGTCCGATTTCAGGCCAGCATACACCTCGGGCCAT 886043606 271491 NM_000214.2(JAG1):c.439C>T (p.Gln147Ter) JAG1 May 16, 2017 MedGen:C1956125,OMIM:118450 Alagille syndrome 1 germline 20 10663963 GAGGCGTGGGATTCCAGTAATGACACCGTTCGTAAGTATCGCTTCTGTGGACTTTTCTCTA 730880503 49211 NM_002755.3(MAP2K1):c.355C>T (p.His119Tyr) MAP2K1 Feb 03, 2017 MedGen:CN517202 not provided germline 15 66436809 AACCAGATCATAAGGGAGCTGCAGGTTCTGCATGAGTGCAACTCTCCGTACATCGTGGGCT 45517179 27435 NM_000548.4(TSC2):c.1513C>T (p.Arg505Ter) TSC2 Sep 21, 2016 MedGen:C0751674,OMIM:606690,Orphanet:ORPHA538,SNOMED CT:73017001;MedGen:C1860707,OMIM:613254;MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000;MedGen:CN517202 Lymphangiomyomatosis;Tuberous sclerosis 2;Tuberous sclerosis syndrome;not provided germline 16 2064341 CACATCCCCGAGGATAAAGACCACCAGGTCCGAAAGCTGGCCACCCAGTTGCTGGTGGACC 267607011 36304 NM_020630.4(RET):c.2711C>T (p.Ser904Phe) RET Dec 04, 2012 MedGen:CN076152 MEN2 phenotype: Unclassified not provided 10 43120184 GCTTGTCCCGAGATGTTTATGAAGAGGATTCCTACGTGAAGAGGAGCCAGGTGCCCAGTCC 80358790 66568 NM_000059.3(BRCA2):c.5656C>T (p.Gln1886Ter) BRCA2 Dec 19, 2016 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline 13 32340011 GAAAACAACGAGAATAAATCAAAAATTTGCCAAACGAAAATTATGGCAGGTTGTTACGAGG 587777189 106822 NM_005017.3(PCYT1A):c.296C>T (p.Ala99Val) PCYT1A Jan 02, 2014 MedGen:C1837073,OMIM:608940,Orphanet:ORPHA85167 Spondylometaphyseal dysplasia with cone-rod dystrophy germline 3 196248245 ACTCTGGTCACGCCCGAGCTCTGATGCAAGCGAAGAACCTTTTCCCTAATACGTACCTCAT 121909202 22982 NM_000503.5(EYA1):c.1081C>T (p.Arg361Ter) EYA1 Jun 29, 2017 MedGen:C1865143,OMIM:602588;MedGen:C0265234,OMIM:113650,Orphanet:ORPHA107,SNOMED CT:290006 Branchiootic syndrome;Melnick-Fraser syndrome germline 8 71244662 GATCCACCCACTTCAGTTTCCCTTGGACTGCGAATGGAAGAAATGATTTTCAACTTGGCAG 1057519630 362597 NM_001199107.1(TBC1D24):c.404C>T (p.Pro135Leu) TBC1D24 Jan 10, 2017 MedGen:CN240682;Human Phenotype Ontology:HP:0001300,MedGen:C0242422,Orphanet:ORPHA68402 Autosomal dominant epilepsy;Parkinsonism germline;maternal;paternal 16 2496552 TCCCCGACATCTCCTTCTGCCCCGCCCTGCCGGCCGTGGTGGCCCTGCTGCTGCACTACAG 281864969 47620 NM_024312.4(GNPTAB):c.1000C>T (p.Arg334Ter) GNPTAB Feb 14, 2013 MedGen:C2673377,OMIM:252500,Orphanet:ORPHA576;MedGen:C0033788,OMIM:252600,Orphanet:ORPHA423461,SNOMED CT:65764006 I cell disease;Pseudo-Hurler polydystrophy germline 12 101770519 GAAGATAACGAAGAACTGAGGTACTCATTGCGATCTATCGAGAGGCATGCACCATGGGTTC 879255523 247396 NM_007174.2(CIT):c.412C>T (p.Gln138Ter) CIT - MedGen:C3711387,Orphanet:ORPHA2512 Primary autosomal recessive microcephaly unknown 12 119857525 ATGAAGAAGAAGGCTTTATTGGCCCAGGAGCAGGTAGGAGGATTTTAACATCATGCTTTTC 121434241 18391 NM_004698.3(PRPF3):c.1481C>T (p.Thr494Met) PRPF3 Jan 15, 2008 MedGen:C1832378,OMIM:601414 Retinitis pigmentosa 18 germline 1 150344216 TATTAGGAACAGAAGCTGTTCAAGACCCCACGAAGGTAGAAGCCCACGTCAGAGCTCAGAT 587777087 102938 NM_015662.2(IFT172):c.3907C>T (p.Arg1303Ter) IFT172 Feb 10, 2014 MedGen:C4017085 Short-rib thoracic dysplasia 10 with polydactyly germline 2 27453428 AGCCGTGCCGTGGACTGCTACCTCAAAGTGCGAGACTCTGGAAACAGCGGCCTGGCGGAGA -1 426986 NM_001171.5(ABCC6):c.1901C>T (p.Ala634Val) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16185001 CCGGGAAGGATTGCATCACCATACACAGTGCCACCTTCGCCTGGTCCCAGGAAAGCCCTCC 142441643 152315 NM_004168.3(SDHA):c.91C>T (p.Arg31Ter) SDHA Nov 09, 2017 MedGen:C1858592,OMIM:604287,Orphanet:ORPHA139411;MedGen:C0027672,SNOMED CT:699346009;MedGen:C3279992,OMIM:614165;MedGen:CN517202 Carney triad;Hereditary cancer-predisposing syndrome;Paragangliomas 5;not provided germline;unknown 5 223509 CAGTGGCCAACAGTGTTGCAAACAGGAACCCGAGGTTTTCACTTCACTGTTGATGGGAACA 113993970 22527 NM_002775.4(HTRA1):c.904C>T (p.Arg302Ter) HTRA1 Sep 11, 2014 MedGen:C1838577,OMIM:600142,Orphanet:ORPHA199354 Cerebral autosomal recessive arteriopathy with subcortical infarcts and leukoencephalopathy germline 10 122506817 GTCACCACCGGGATCGTGAGCACCACCCAGCGAGGCGGCAAAGAGCTGGGGCTCCGCAACT 80358494 65925 NM_000059.3(BRCA2):c.2224C>T (p.Gln742Ter) BRCA2 Jan 03, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline 13 32336579 GAGGTCTTGGCTGCAGCATGTCACCCAGTACAACATTCAAAAGTGGAATACAGTGATACTG 1057520110 363906 NM_001972.3(ELANE):c.170C>T (p.Ala57Val) ELANE Dec 02, 2016 MedGen:CN517202 not provided germline 19 852978 TGCAGCTGCGCGGAGGCCACTTCTGCGGCGCCACCCTGATTGCGCCCAACTTCGTCATGTC -1 474773 NM_002485.4(NBN):c.1171C>T (p.Gln391Ter) NBN Mar 20, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 8 89955509 CCAAAAGAAATCAAAGTCTCCAAAATGGAACAAAAATTCAGAATGCTTTCACAAGATGCAC 762739726 450717 NM_025216.2(WNT10A):c.382C>T (p.Arg128Ter) WNT10A Aug 17, 2017 MedGen:C0796093,OMIM:257980,Orphanet:ORPHA2721;MedGen:C1835492,OMIM:150400 Odontoonychodermal dysplasia;Tooth agenesis, selective, 4 germline 2 218889989 ATGTGTTCTGGGTCTTTAACCACAGGTTTCCGAGAGAGCGCTTTTGCCTACGCCATCGCAG 74315402 28435 NM_000311.4(PRNP):c.350C>T (p.Ala117Val) PRNP Dec 18, 2008 MedGen:C0162534,Orphanet:ORPHA56970;MedGen:C0017495,OMIM:137440,Orphanet:ORPHA356,SNOMED CT:67155006 Genetic prion diseases;Gerstmann-Straussler-Scheinker syndrome germline 20 4699570 CCAACATGAAGCACATGGCTGGTGCTGCAGCAGCTGGGGCAGTGGTGGGGGGCCTTGGCGG 199476090 23252 NM_000264.3(PTCH1):c.1081C>T (p.Gln361Ter) PTCH1 Apr 07, 2017 MedGen:C0004779,OMIM:109400,Orphanet:ORPHA377,SNOMED CT:69408002 Gorlin syndrome germline 9 95479134 CTTGGACTGTGCTGCAGCGCCCATGCCCTGCAGACCATGTTCCAGTTAATGACTCCCAAGC 74767530 22176 NM_000492.3(CFTR):c.3484C>T (p.Arg1162Ter) CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008;MedGen:CN517202 Cystic fibrosis;not provided germline;unknown 7 117627537 TTATTTTTATTTCAGATGCGATCTGTGAGCCGAGTCTTTAAGTTCATTGACATGCCAACAG 28933407 27613 NM_002467.5(MYC):c.214C>T (p.Pro72Ser) MYC Sep 01, 1993 Human Phenotype Ontology:HP:0030080,MedGen:C0006413,OMIM:113970,Orphanet:ORPHA543,SNOMED CT:77381001 Burkitt lymphoma germline 8 127738431 GAGGATATCTGGAAGAAATTCGAGCTGCTGCCCACCCCGCCCCTGTCCCCTAGCCGCCGCT 778740017 214391 NM_001863.4(COX6B1):c.58C>T (p.Arg20Cys) COX6B1 Feb 01, 2015 MedGen:C0268237,OMIM:220110,Orphanet:ORPHA254905,SNOMED CT:67434000 Hepatic failure, early-onset, and neurologic disorder due to cytochrome C oxidase deficiency germline 19 35651301 AAGAACTACAAGACCGCCCCTTTTGACAGCCGCTTCCCCAACCAGAACCAGACTAGAAACT 747081862 443476 NM_000094.3(COL7A1):c.5869C>T (p.Arg1957Trp) COL7A1 Jul 20, 2017 MedGen:CN517202 not provided germline 3 48575736 CCTCTTGCTGTCCCTCAGGCATCTGCCCTGCGGGAGATCGTGGAGACCTGGGATGAGAGCT 267607147 33470 NM_021625.4(TRPV4):c.2395C>T (p.Pro799Ser) TRPV4 Apr 02, 2014 MedGen:C0265281,OMIM:156530,Orphanet:ORPHA2635,SNOMED CT:22764001;Human Phenotype Ontology:HP:0002652,MedGen:C0410528,SNOMED CT:105986008 Metatrophic dysplasia;Skeletal dysplasia germline 12 109784379 AACCAGAACTTGGGCATCATCAACGAGGACCCGGGCAAGAATGAGACCTACCAGTATTATG 63749950 95864 NM_000249.3(MLH1):c.842C>T (p.Ala281Val) MLH1 Sep 05, 2013 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Lynch syndrome germline 3 37017557 CCTTGAGAAAAGCCATAGAAACAGTGTATGCAGCCTATTTGCCCAAAAACACACACCCATT 121907918 18509 NM_000280.4(PAX6):c.382C>T (p.Arg128Cys) PAX6 Jun 01, 1996 MedGen:C1850992,OMIM:136520 Foveal hypoplasia and presenile cataract syndrome germline 11 31800832 TTGCAGGTGTCATCAATAAACAGAGTTCTTCGCAACCTGGCTAGCGAAAAGCAACAGATGG 121907906 18536 NM_024426.4(WT1):c.1288C>T (p.Arg430Ter) WT1 Dec 15, 1996 MedGen:C0950121,OMIM:194080,Orphanet:ORPHA220,SNOMED CT:236385009;MedGen:CN033288,OMIM:194070 Drash syndrome;Wilms tumor 1 germline 11 32392717 CCATACCAGTGTGACTTCAAGGACTGTGAACGAAGGTTTTCTCGTTCAGACCAGCTCAAAA 121908013 18790 NM_000375.2(UROS):c.158C>T (p.Pro53Leu) UROS May 01, 1990 MedGen:C0162530,OMIM:263700,Orphanet:ORPHA79277 Congenital erythropoietic porphyria germline 10 125815120 TATTGCTTTTTGGTGTGCAGCTTTCTCATCCTGAAGATTACGGGGGACTCATTTTTACCAG 199801224 378630 NM_152906.6(TANGO2):c.94C>T (p.Arg32Ter) TANGO2 Jan 03, 2017 MedGen:CN517202 not provided germline 22 20043392 TTGGCAGCCAACAGGGATGAATTCTACAGCCGACCCTCCAAGTTAGCTGACTTCTGGGGGA 199422233 25000 NM_002641.3(PIGA):c.163C>T (p.Gln55Ter) PIGA Dec 15, 1995 MedGen:C3806670,OMIM:300818 Paroxysmal nocturnal hemoglobinuria 1 somatic X 15331768 AATATGGGAGGCGTGGAAAGCCACATTTACCAGCTCTCTCAGTGCCTGATTGAAAGAGGGC 387906787 39095 NM_001142784.2(IL11RA):c.475C>T (p.Gln159Ter) IL11RA Jul 15, 2011 MedGen:C3280073,OMIM:614188,Orphanet:ORPHA284149 Craniosynostosis and dental anomalies germline 9 34657331 AGGAAGAAGACAGTCCTAGGAGCTGATAGCCAGAGGTAGGACGTGAGGGAGCATGTGGGGG 267606787 31577 NM_000129.3(F13A1):c.2110C>T (p.Arg704Trp) F13A1 Jun 01, 2009 Human Phenotype Ontology:HP:0040233,MedGen:C2750514,OMIM:613225 Factor xiii, a subunit, deficiency of germline 6 6145708 GAAGTGTGCCGGCCCTGGGTCTCTGGGCATCGGAAGCTGATAGCCAGCATGAGCAGTGACT 137854495 24528 NM_005502.3(ABCA1):c.2810C>T (p.Ala937Val) ABCA1 Aug 01, 1999 MedGen:C0039292,OMIM:205400,Orphanet:ORPHA31150 Tangier disease germline 9 104822514 AGATCACCTCCTTCCTGGGCCACAATGGAGCGGGGAAGACGACCACCATGTAAGAAGAGGG 137854572 15845 NM_000038.5(APC):c.1621C>T (p.Gln541Ter) APC May 24, 2017 MedGen:C2673218;MedGen:CN240755;MedGen:C2713442,OMIM:175100;MedGen:C0027672,SNOMED CT:699346009 Brain tumor-polyposis syndrome 2;Familial adenomatous polyposis;Familial adenomatous polyposis 1;Hereditary cancer-predisposing syndrome germline 5 112828001 GCCCAACTAAAATCTGAAAGTGAAGACTTACAGCAGGTACTATTTAGAATTTCACCTGTTT 878853149 237503 NM_001083962.1(TCF4):c.520C>T (p.Arg174Ter) TCF4 Jul 25, 2014 Human Phenotype Ontology:HP:0001249,MedGen:C1843367 Intellectual disability de novo 18 55350388 TTTCTTTCAGAGGTACAGACAAAGAAAGTTCGAAAAGTTCCTCCAGGTTTGCCATCTTCAG 121913590 29214 NM_000530.7(MPZ):c.292C>T (p.Arg98Cys) MPZ Apr 04, 2017 MedGen:C0270912,OMIM:118200,Orphanet:ORPHA101082,SNOMED CT:42986003;MedGen:C0751036,Orphanet:ORPHA65753,SNOMED CT:398040009;MedGen:CN517202 Charcot-Marie-Tooth disease, demyelinating, type 1b;Charcot-Marie-Tooth disease, type I;not provided germline 1 161306864 TACATTGACGAGGTGGGGACCTTCAAAGAGCGCATCCAGTGGGTAGGGGACCCTCGCTGGA 28942100 18204 NM_000187.3(HGD):c.688C>T (p.Pro230Ser) HGD Jun 14, 2016 MedGen:C0002066,OMIM:203500,Orphanet:ORPHA56 Alkaptonuria germline;unknown 3 120644405 GGCTTGGCCAATCCTCGTGATTTCTTGATACCCATTGCCTGGTATGAGGATCGCCAAGTAC 80356984 68966 NM_007294.3(BRCA1):c.1576C>T (p.Gln526Ter) BRCA1 Sep 08, 2016 MedGen:C2676676,OMIM:604370;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 1;Hereditary cancer-predisposing syndrome germline 17 43093955 GATTTTATCAAGAAAGCAGATTTGGCAGTTCAAAAGACTCCTGAAATGATAAATCAGGGAA 267607171 15153 NM_022067.3(VIPAS39):c.871C>T (p.Gln291Ter) VIPAS39 Apr 01, 2010 MedGen:C3150672,OMIM:613404 Arthrogryposis, renal dysfunction, and cholestasis 2 germline 14 77435885 CCATTTTCAGCAGAAGATTCCGCACACATACAGGACCATTACACGCTCCTGGAACGTCAGA 727503444 176115 NM_153700.2(STRC):c.3670C>T (p.Arg1224Ter) STRC Nov 17, 2015 MedGen:CN043648,Orphanet:ORPHA87884 Nonsyndromic hearing loss and deafness germline 15 43608091 CACATGATCTATCAGCTGCCCACTAGAGTTCGAGGGAGCCTGGTGAGAGGGGGTGCCTGGA 200956636 429705 NM_004580.4(RAB27A):c.550C>T (p.Arg184Ter) RAB27A Jun 27, 2016 MedGen:C1868679,OMIM:607624,Orphanet:ORPHA79477 Griscelli syndrome type 2 germline 15 55205623 ATTGAGATGCTTCTGGACCTGATAATGAAGCGAATGGAACGGTGTGTGGACAAGTCCTGGA -1 481349 NM_020920.3(CHD8):c.3541C>T (p.Arg1181Ter) CHD8 Sep 08, 2017 MedGen:C3554373,OMIM:615032 Autism, susceptibility to, 18 de novo 14 21400605 TAATATAGTTTTCTGTTTTTTAGTTGGGGACGATGGCGAGATATTTTATCTCATGGACGCT 796065312 204578 NM_000240.3(MAOA):c.133C>T (p.Arg45Trp) MAOA Nov 10, 2014 MedGen:C0796275,OMIM:300615,Orphanet:ORPHA3057 Monoamine oxidase A deficiency maternal X 43683572 TATGGCGTTAGTGTTTTGGTTTTAGAAGCTCGGGACAGGGTTGGAGGAAGAACATATACTA -1 430995 NM_015634.3(KIF1BP):c.976C>T (p.Gln326Ter) KIF1BP Jun 07, 2017 MedGen:C1836123,OMIM:609460,Orphanet:ORPHA66629 Goldberg-Shprintzen megacolon syndrome inherited 10 69011001 AAATACTGTTTGACTCTCATGCAGAATGCCCAACTCTCCATGCAGGTAATGCAGTCAGAAG 557671802 167502 NM_024537.3(CARS2):c.752C>T (p.Pro251Leu) CARS2 Mar 18, 2015 MedGen:CN221139;MedGen:C4225251,OMIM:616672,Orphanet:ORPHA477774 Alpers encephalopathy;Combined oxidative phosphorylation deficiency 27 germline 13 110677007 TCTGGGCCTCTCCCTGGGGACCCGGGAGGCCGGGCTGGCACATCGAGTGCTCTGCCATCGC 786205006 187406 NM_005249.4(FOXG1):c.610C>T (p.Leu204Phe) FOXG1 Jun 08, 2016 MedGen:CN517202 not provided germline;unknown 14 28767889 ATCCGGCAGAGCCCCGAGAAGCGGCTCACGCTCAACGGCATCTACGAGTTCATCATGAAGA 121909382 23630 NM_000339.2(SLC12A3):c.1763C>T (p.Ala588Val) SLC12A3 Jan 01, 1996 MedGen:C0268450,OMIM:263800,Orphanet:ORPHA358,SNOMED CT:3188003 Familial hypokalemia-hypomagnesemia germline 16 56884142 TGGTCATCATGTTCCTCCTCACCTGGTGGGCGGCCCTCATCGCCATTGGCGTGGTGCTCTT 104894595 16605 NM_000263.3(NAGLU):c.1562C>T (p.Pro521Leu) NAGLU Jan 01, 1999 MedGen:C0086648,OMIM:252920,Orphanet:ORPHA79270,SNOMED CT:59990008 Mucopolysaccharidosis, MPS-III-B germline 17 42543568 GCCACAATCGTAGCCCGCTGGTCAGGCGGCCGTCCCTACAGATGAATACCAGCATCTGGTA 587781786 151201 NM_032043.2(BRIP1):c.463C>T (p.Gln155Ter) BRIP1 Mar 07, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline 17 61849173 TCCATATACAGAGATGAAAATGATGATTTTCAAGTAGAGAAGAAAAGAATTCGACCCTTAG 797044526 200405 NM_001396.3(DYRK1A):c.883C>T (p.Leu295Phe) DYRK1A Feb 12, 2016 MedGen:C3279839,OMIM:614104,Orphanet:ORPHA464306;MedGen:CN517202 Mental retardation, autosomal dominant 7;not provided de novo;germline 21 37490393 CACTGTGATCTAAAACCTGAAAATATCCTTCTTTGTAACCCCAAACGCAGTGCAATCAAGA 1060500733 403329 NM_005359.5(SMAD4):c.1096C>T (p.Gln366Ter) SMAD4 Jun 25, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0345893,OMIM:174900,Orphanet:ORPHA329971,SNOMED CT:9273005 Hereditary cancer-predisposing syndrome;Juvenile polyposis syndrome germline 18 51065563 CCTTCTGGAGGAGATCGCTTTTGTTTGGGTCAACTCTCCAATGTCCACAGGACAGAAGCCA 397509330 70405 NM_007294.3(BRCA1):c.850C>T (p.Gln284Ter) BRCA1 May 24, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 1;Hereditary cancer-predisposing syndrome;not provided germline 17 43094681 TGTGGCACAAATACTCATGCCAGCTCATTACAGCATGAGAACAGCAGTTTATTACTCACTA 879255645 247555 NM_018052.4(VAC14):c.1748C>T (p.Ser583Leu) VAC14 Jul 28, 2016 MedGen:C4310743,OMIM:617054 Striatonigral degeneration, childhood-onset germline 16 70698725 TGCTGCGGGAGGAGGACCTCAAGTTCGCCTCGACCATGGTCCACGCCCTCAACACCATCCT 1060501627 397926 NM_000051.3(ATM):c.4906C>T (p.Gln1636Ter) ATM Mar 20, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005 Ataxia-telangiectasia syndrome germline 11 108295056 GATCAGATGGTGGACATTATGAGAGCTTCTCAGGGTGCTAATTTTAAATGACATGGGCTAT 193922735 362586 NM_032387.4(WNK4):c.1682C>T (p.Pro561Leu) WNK4 Feb 16, 2017 MedGen:C1840390,OMIM:614491,Orphanet:ORPHA88939 Pseudohypoaldosteronism type 2B germline 17 42787483 CCAGTGTCTTCCCCCCTGAGCCTGAGGAGCCAGAGGCAGACCAGCACCAGCCCTTCCTTTT 886041936 265061 NM_018486.2(HDAC8):c.496C>T (p.Arg166Ter) HDAC8 Aug 23, 2016 Human Phenotype Ontology:HP:0001999,MedGen:C0424503;Human Phenotype Ontology:HP:0000750,MedGen:C0454644;Human Phenotype Ontology:HP:0001263,MedGen:C4020875;Human Phenotype Ontology:HP:0001511,MedGen:C1386048;Human Phenotype Ontology:HP:0000252,MedGen:C0424688;Human Phenotype Ontology:HP:0002209,MedGen:C1857042;MedGen:CN517202 Abnormal facial shape;Delayed speech and language development;Global developmental delay;Intrauterine growth retardation;Microcephaly;Sparse scalp hair;not provided germline;unknown X 72495210 AATGATGCTGTCCTGGGAATATTACGATTGCGACGGAAATTTGAGCGTATTCTCTACGTGG 767568897 187695 NM_015929.3(LIPT1):c.212C>T (p.Ser71Phe) LIPT1 Apr 01, 2014 MedGen:C4225379,OMIM:616299,Orphanet:ORPHA401862 Lipoyltransferase 1 deficiency germline 2 99162169 CAATTCTATTCTTTTGGCAGAATTCTCCCTCTGTTGTAATTGGTAGGCATCAAAATCCTTG 137852761 23823 NM_005591.3(MRE11):c.1714C>T (p.Arg572Ter) MRE11 May 26, 2017 MedGen:C1858391,OMIM:604391,Orphanet:ORPHA251347;MedGen:C0027672,SNOMED CT:699346009 Ataxia-telangiectasia-like disorder 1;Hereditary cancer-predisposing syndrome germline 11 94447288 ATCTCAGCAGCAACCAACAAAGGAAGAGGCCGAGGAAGAGGTCGAAGAGGTGGAAGAGGGC -1 484017 NM_000535.6(PMS2):c.73C>T (p.Gln25Ter) PMS2 Jun 14, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 7 6005982 ATCAAACCTATTGATCGGAAGTCAGTCCATCAGATTTGCTCTGGGCAGGTGGTACTGAGTC 104895506 16625 NM_001127255.1(NLRP7):c.2077C>T (p.Arg693Trp) NLRP7 Jun 14, 2016 MedGen:C2931618,OMIM:231090,Orphanet:ORPHA254685 Hydatidiform mole germline 19 54938096 AAACAAAGCTTCCTGAGTGACTCTTCTGTGCGGATTCTTTGTGACCACGTAACCCGTAGCA 772808534 431610 NM_206933.2(USH2A):c.100C>T (p.Arg34Ter) USH2A Jan 01, 2015 Human Phenotype Ontology:HP:0000547,MeSH:D012174,MedGen:C0035334,OMIM:268000,Orphanet:ORPHA791,SNOMED CT:28835009 Retinitis pigmentosa unknown 1 216422237 TATTTTGCTTCAATATCCTTGACTGAGTCACGAGGTCTTTTCCCAAGGCTGGAGAACGTGG 63751412 96040 NM_000251.2(MSH2):c.1204C>T (p.Gln402Ter) MSH2 Apr 04, 2014 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Hereditary cancer-predisposing syndrome;Lynch syndrome germline 2 47429869 AAGAAGTTTCAAAGACAAGCAGCAAACTTACAAGATTGTTACCGACTCTATCAGGGTATAA -1 443650 NM_000038.5(APC):c.4585C>T (p.Gln1529Ter) APC Aug 14, 2017 MedGen:CN517202 not provided germline 5 112840179 GATGTGGAATTAAGAATAATGCCTCCAGTTCAGGAAAATGACAATGGGAATGAAACAGAAT 796052234 204057 NM_001193416.2(DDX3X):c.1462C>T (p.Arg488Cys) DDX3X Feb 22, 2017 MedGen:CN517202 not provided germline X 41346375 AGGGATAGAGAAGAGGCCCTTCACCAGTTCCGCTCAGGAAAAAGCCCAATTTTAGTGGCTA 1060503383 395696 NM_006772.2(SYNGAP1):c.2059C>T (p.Arg687Ter) SYNGAP1 Jun 05, 2017 MedGen:C2675473,OMIM:612621;MedGen:CN517202 Mental retardation, autosomal dominant 5;not provided germline 6 33441318 AGTAGCTTTGAGGGTTACATCGACTTGGGCCGAGAGCTCTCCACACTGCATGCCCTACTCT 80356782 76562 NM_001876.3(CPT1A):c.478C>T (p.Arg160Ter) CPT1A Mar 07, 2013 MedGen:C0342789,OMIM:255120,SNOMED CT:238001003 Carnitine palmitoyltransferase I deficiency not provided 11 68804077 CTTCAGGGTATGGTCAAGATCTTTTCAGGCCGAAAACCCATGTTGTACAGCTTCCAGACAT 137853200 28298 NM_004431.4(EPHA2):c.2819C>T (p.Thr940Ile) EPHA2 May 01, 2009 Gene:10306,MedGen:C1861825,OMIM:116600 Cataract 6, multiple types germline 1 16129440 ACACTGCCATCGAGAAGGTGGTGCAGATGACCAACGAGTAAGTCAGGCCCCTTTCCGTCCC 151206295 207921 NM_000372.4(TYR):c.1064C>T (p.Ala355Val) TYR Apr 17, 2015 MedGen:C0268494,OMIM:203100,Orphanet:ORPHA79431,SNOMED CT:6483008 Tyrosinase-negative oculocutaneous albinism germline;maternal 11 89227850 CAGGATTTGCTAGTCCACTTACTGGGATAGCGGATGCCTCTCAAAGCAGCATGCACAATGC 121918138 15776 NM_203395.2(IYD):c.301C>T (p.Arg101Trp) IYD Apr 24, 2008 MedGen:C0342195,OMIM:274800,SNOMED CT:17885001 Iodotyrosine deiodination defect germline 6 150389474 CAGGAATTTTATGAACTTCTCAATAAGAGACGGTCAGTCAGGTTCATAAGTAATGAGCAAG 137852668 24154 NM_002180.2(IGHMBP2):c.121C>T (p.Gln41Ter) IGHMBP2 Sep 01, 2001 MedGen:C0043116,OMIM:253300,Orphanet:ORPHA83330,SNOMED CT:64383006 Werdnig-Hoffmann disease germline 11 68906103 TGGCAGGAGAACATCTCTCTGAAAGAGCTCCAGAGCCGAGGCGTGTGTTTGCTGAAGCTGC 1060501276 391184 NM_031844.2(HNRNPU):c.307C>T (p.Gln103Ter) HNRNPU Apr 15, 2017 - - germline 1 244864001 GAGGAAGGAATCTCCGCTCTGGACGGCGACCAGATGGAGCTAGGAGAGGAGAACGGGGCCG 863225001 213862 NM_004006.2(DMD):c.5131C>T (p.Gln1711Ter) DMD Jan 17, 2014 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Duchenne muscular dystrophy germline X 32364605 CTTTTGGATGAATCAGAGAAAAAGAAACCCCAGCAAAAAGAAGACGTGCTTAAGGTAGCAA 1057517844 359227 NM_206933.2(USH2A):c.12691C>T (p.Gln4231Ter) USH2A Feb 05, 2016 MedGen:CN517202 not provided germline 1 215675220 AATACATTTATGTATAATGACACAGGTTTGCAACCATGGACGCAGTGTGAATATAAAATCT 563390335 228127 NM_000527.4(LDLR):c.304C>T (p.Gln102Ter) LDLR Mar 30, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline;not applicable;unknown 19 11102777 CAAGTGGACTGCGACAACGGCTCAGACGAGCAAGGCTGTCGTAAGTGTGGCCCTGCCTTTG -1 432447 NM_001085458.1(CTNND1):c.1093C>T (p.Gln365Ter) CTNND1 Sep 20, 2017 MedGen:CN479606,OMIM:617681 BLEPHAROCHEILODONTIC SYNDROME 2 germline 11 57801869 AAAGGAGGGCCTCCACCTCCTAATTGGAGACAGCCAGAGCTGCCAGAGGTGATCGCCATGC 387906747 39014 NM_024408.3(NOTCH2):c.6949C>T (p.Gln2317Ter) NOTCH2 Mar 06, 2011 MedGen:C0917715,OMIM:102500,SNOMED CT:63122002 Hajdu-Cheney syndrome germline 1 119915773 TTCCAGCTCATCCCTAAAGGCAGTATTGCCCAACCAGCGGGGGCTCCCCAGCCTCAGTCCA 150382575 211606 NM_021957.3(GYS2):c.574C>T (p.Arg192Ter) GYS2 Dec 13, 2012 MedGen:CN517202 not provided germline 12 21574248 TGGCAGGCTGGAATTGGACTGATCCTTTCTCGAGCCAGGAAACTTCCTATTGCCACAATAT 121913459 27663 NM_007313.2(ABL1):c.1001C>T (p.Thr334Ile) ABL1 Mar 10, 2016 Human Phenotype Ontology:HP:0005506,MeSH:D015464,MedGen:C0023473,OMIM:608232,Orphanet:ORPHA521;MedGen:C4016396;Gene:8009,MedGen:C1855472,OMIM:247640 Chronic myeloid leukemia;Leukemia, Philadelphia chromosome-positive, resistant to imatinib;Lymphoblastic leukemia, acute, with lymphomatous features germline;somatic 9 130872896 GCACCCGGGAGCCCCCGTTCTATATCATCACTGAGTTCATGACCTACGGGAACCTCCTGGA 121912545 29901 NM_182894.2(VSX2):c.679C>T (p.Arg227Trp) VSX2 Sep 01, 2004 MedGen:C1864720,OMIM:610093 Microphthalmia, isolated 2 germline 14 74259701 GCGGAGTATGGGCTCTACGGGGCCATGGTGCGGCACTCCATCCCCCTGCCCGAGTCCATCC 80338907 27240 NM_003383.4(VLDLR):c.769C>T (p.Arg257Ter) VLDLR Aug 26, 2008 MedGen:C4016431;MedGen:CN074243,OMIM:224050 Cerebellar ataxia and mental retardation with quadrupedal locomotion 1;Cerebellar ataxia, mental retardation, and dysequilibrium syndrome 1 germline 9 2643480 GGCTCTGGCGAGTGCATCCATAAGAAGTGGCGATGTGATGGGGACCCTGACTGCAAGGATG 606231303 167939 NM_001136191.2(KANK2):c.2009C>T (p.Ala670Val) KANK2 Jun 01, 2014 MedGen:C4015202,OMIM:616099,Orphanet:ORPHA420686 Palmoplantar keratoderma and woolly hair germline 19 11174532 TCAACATCGCCGACAGCAACGGCAACACAGCCCTGCACTACTCCGTGTCTCATGCCAACTT 876660631 233901 NM_000051.3(ATM):c.205C>T (p.Gln69Ter) ATM Sep 01, 2015 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 11 108229197 TTTTCTTGAAGATTTTTACAGAAATATATTCAGAAAGAAACAGAATGTCTGAGAATAGCAA 771578775 214530 NM_020247.4(COQ8A):c.1042C>T (p.Arg348Ter) COQ8A Nov 01, 2017 MedGen:C2677589,OMIM:612016,Orphanet:ORPHA139485;MedGen:C2677589,OMIM:612016,Orphanet:ORPHA139485;MedGen:CN517202 Coenzyme Q10 deficiency, primary, 4;Coenzyme Q10 deficiency, primary, 4;not provided germline 1 226982996 GCCGCATCCATTGGGCAGGTGCACTTGGCCCGAATGAAGGGCGGCCGCGAGGTGGCCATGA 775141057 361949 NM_018082.5(POLR3B):c.2774C>T (p.Pro925Leu) POLR3B Dec 21, 2016 MedGen:C1859301,OMIM:213002,Orphanet:ORPHA85186 Cerebellar hypoplasia with endosteal sclerosis germline 12 106496115 ACATGCCATTTTGTGATTCTGGCATCTGTCCGGACATCATCATGAACCCACACGGCTTCCC 587776628 21185 NM_003738.4(PTCH2):c.3357+5C>T PTCH2 Aug 31, 2010 MedGen:C3838465 Basal cell carcinoma, somatic somatic 1 44823064 TGTCCATCCTGGGCCCGCCGCCAGAGGTGACCACACCCTCGGCACCATCCCTCTACTCCCA -1 456625 NM_001277115.1(DNAH11):c.13321C>T (p.Gln4441Ter) DNAH11 Jul 19, 2017 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244 Ciliary dyskinesia germline 7 21901024 GTTTTTGCCATAGGCGCCCGCTGGGACACCCAAGCAGGAACCATTGTTGAAGCCCGTCTCA 122454129 26698 NM_004586.2(RPS6KA3):c.1147C>T (p.Arg383Trp) RPS6KA3 May 01, 1999 MedGen:C0796225,OMIM:300844 Mental retardation, X-linked 19 germline X 20175244 CCACCTAGTGCTAATGCACATCAGCTTTTTCGGGGGTTTAGTTTTGTTGCTATTACCTCAG 118203935 15948 NM_173483.3(CYP4F22):c.1303C>T (p.His435Tyr) CYP4F22 Nov 07, 2016 Gene:50992,MedGen:C1858142,OMIM:604777,OMIM:604781;MedGen:CN517202 Autosomal recessive congenital ichthyosis 5;not provided germline 19 15549170 ATCATCTGCTTGGTCAGCATCTATGGAACCCACCACAACCCCACAGTGTGGCCTGACTCCA 115209243 472238 NM_002642.3(PIGC):c.61C>T (p.Arg21Ter) PIGC Dec 21, 2017 MedGen:CN703738,OMIM:617816 GLYCOSYLPHOSPHATIDYLINOSITOL BIOSYNTHESIS DEFECT 16 germline 1 172442562 GAGGTCAAGTGGCAGAAGGTCTTGTATGAGCGACAGCCCTTTCCTGATAACTATGTGGACC 483352866 136991 NM_001199107.1(TBC1D24):c.533C>T (p.Ser178Leu) TBC1D24 Dec 22, 2014 MedGen:C3892048,OMIM:616044;MedGen:C2829265,OMIM:614617 Deafness, autosomal dominant 65;Deafness, autosomal recessive 86 germline 16 2496681 TGATCGACCAGAGCTTCCTGGCCTTTGAGTCGTCCTGCATGACGTTTGGGGACCTGGTGAA 121908535 21038 NM_014252.3(SLC25A15):c.815C>T (p.Thr272Ile) SLC25A15 May 31, 2012 MedGen:C0268540,OMIM:238970,Orphanet:ORPHA415,SNOMED CT:30287008 Hyperornithinemia-hyperammonemia-homocitrullinuria syndrome germline 13 40809576 TAACGGCCTTATATTCTGGACTGAAACCTACTATGATTCGAGCATTCCCTGCCAATGGAGC 121913611 29195 NM_005373.2(MPL):c.769C>T (p.Arg257Cys) MPL Jun 01, 2008 MedGen:C1327915,OMIM:604498,Orphanet:ORPHA3319 Congenital amegakaryocytic thrombocytopenia germline 1 43340042 CAGCCTGGCAACTCCTACTGGCTGCAGCTGCGCAGCGAACCTGATGGGATCTCCCTCGGTG 886041620 264018 NM_001029882.3(AHDC1):c.1759C>T (p.Arg587Ter) AHDC1 Feb 10, 2017 MedGen:CN517202 not provided germline 1 27550357 GCCACCATGGCCATGCCAGAGGTAAAAAAACGACGGCGGCGGAAGCAGAAGCTGGCATCTC 28939702 21615 NM_001171.5(ABCC6):c.4015C>T (p.Arg1339Cys) ABCC6 Oct 01, 2002 MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16154899 CCCATTGCCCACGTGGGGCTGCACACACTGCGCTCCAGGATCAGCATCATCCCCCAGGTGA 267608675 49673 NM_007055.3(POLR3A):c.4006C>T (p.Gln1336Ter) POLR3A Aug 02, 2012 MedGen:C1843200,OMIM:607694 Hypomyelinating leukodystrophy 7 not provided 10 77980159 GACCATCTCTTTGACGCTGCCTACTTCGGGCAGAAGGACTCTGTGTGTGGTAGGTTTGATG 137852947 19151 NM_138694.3(PKHD1):c.8011C>T (p.Arg2671Ter) PKHD1 Mar 01, 2002 MedGen:C0085548,OMIM:263200,Orphanet:ORPHA731,SNOMED CT:28770003 Autosomal recessive polycystic kidney disease germline 6 51847871 TACCCTGACATCCTCCTAAGATGTGGGAGTCGAGTGGGTCTGTCTTTTCCATTTCTTCCAT 63751298 96235 NM_000251.2(MSH2):c.1720C>T (p.Gln574Ter) MSH2 Sep 05, 2013 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Lynch syndrome germline 2 47471023 ACCAAAAATAAAACAGAATATGAAGAAGCCCAGGATGCCATTGTTAAAGAAATTGTCAATA 267606899 24743 m.12848C>T MT-ND5 Sep 19, 2013 Human Phenotype Ontology:HP:0001112,MedGen:C0917796,OMIM:535000,Orphanet:ORPHA104,SNOMED CT:58610003 Leber's optic atrophy germline MT 12848 GAGCAGATGCCAACACAGCAGCCATTCAAGCAATCCTATACAACCGTATCGGCGATATCGG 267607136 15797 NM_001160372.3(TRAPPC9):c.1129C>T (p.Arg377Ter) TRAPPC9 Nov 01, 2011 MedGen:C2750791,OMIM:613192 Mental retardation, autosomal recessive 13 germline 8 140397625 TTTCTTCAGAATGCAGTTTACATTAACCTTCGACAGGTGAGTGTATGTCTACCTGTAAGTG 863224890 213621 NM_003482.3(KMT2D):c.11275C>T (p.Gln3759Ter) KMT2D Jun 17, 2014 MedGen:CN030661,OMIM:147920 Kabuki syndrome 1 de novo 12 49033430 GGACAGGTGGCAATCCAGCAGCAACAGCAGCAGGGTCCTGGAGTACAGACAAACCAAGCTC -1 430955 NM_003140.2(SRY):c.331C>T (p.Gln111Ter) SRY Nov 03, 2015 MedGen:C2748895,OMIM:400045;MedGen:C2748896,OMIM:400044 46,XX sex reversal, type 1;46,XY sex reversal, type 1 germline Y 2787273 CTTACTGAAGCCGAAAAATGGCCATTCTTCCAGGAGGCACAGAAATTACAGGCCATGCACA 137852955 19672 NM_001077653.2(TBX20):c.583C>T (p.Gln195Ter) TBX20 Aug 01, 2007 MedGen:C1969657,OMIM:611363 Atrial septal defect 4 germline 7 35245020 GTGCATCCAGATTCTCCTTTTACCGGTGAGCAACTACTCAAACAGATGGTGTCTTTTGAAA 137852635 24306 NM_001038.5(SCNN1A):c.1685C>T (p.Ser562Leu) SCNN1A Dec 01, 1999 MedGen:C1449843,OMIM:264350,Orphanet:ORPHA171876 Pseudohypoaldosteronism type 1 autosomal recessive germline 12 6348198 GCAGCCAGTGGAGCCTGTGGTTCGGCTCCTCGGTGTTGTCTGTGGTGGAGATGGCTGAGCT 886039358 259984 NM_207122.1(EXT2):c.544C>T (p.Arg182Ter) EXT2 May 19, 2017 MedGen:CN517202 not provided germline 11 44109201 CTACATTTTAAATTTCTTGACAGGTGGGATCGAGGTACGAATCACCTGTTGTTCAACATGT 886041157 264232 NM_031443.3(CCM2):c.214C>T (p.Gln72Ter) CCM2 Nov 18, 2015 MedGen:CN517202 not provided germline 7 45063927 TTTTTCTTCACTTTCTTTCAGTATTTAGGTCAGTTAACGTCCATACCAGGATACCTGAATC 121918301 18644 NM_024757.4(EHMT1):c.3502C>T (p.Arg1168Ter) EHMT1 Oct 05, 2010 MedGen:C0795833,OMIM:610253,Orphanet:ORPHA261494 Chromosome 9q deletion syndrome germline 9 137818100 GAGCTGATTTCAGACTCAGAAGCCGACGTTCGAGAGGAAGATTCTTACCTCTTTGATCTCG 786201912 181843 NM_000465.3(BARD1):c.298C>T (p.Gln100Ter) BARD1 Sep 29, 2017 MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C0027672,SNOMED CT:699346009 Familial cancer of breast;Hereditary cancer-predisposing syndrome germline 2 214792363 GCCTGGATACAAGACTTGAAGATAAATAGACAACTGGACAGCATGATTCAACTTTGTAGTA 587777289 132047 NM_173849.2(GSC):c.400C>T (p.Gln134Ter) GSC Dec 05, 2013 MedGen:C1865361,OMIM:602471,Orphanet:ORPHA397623 Short stature, auditory canal atresia, mandibular hypoplasia, and skeletal abnormalities germline 14 94769173 GGTTCGGTGCTGGTGTCCCCGGTACCGCACCAGATGCTGCCCTACATGAACGTGGGCACGC 397515582 76684 NM_194248.2(OTOF):c.1273C>T (p.Arg425Ter) OTOF Apr 26, 2011 MedGen:C1832828,OMIM:601071 Deafness, autosomal recessive 9 not provided 2 26483581 CAGTGGGCCCGGTTCTATGTGAAAATTTACCGAGCAGAGGGGCTGCCCCGTATGAACACAA 10065172 39673 NM_001145805.1(IRGM):c.313C>T (p.Leu105=) IRGM Jan 13, 2013 Gene:100190926,MedGen:C2677079,OMIM:612278 Inflammatory bowel disease 19 germline 5 150848436 GGGTCTGCCACCACAACCCTGGAGAACTACCTGATGGAAATGCAGTTCAACCGGTATGACT 864621972 204423 NM_004836.6(EIF2AK3):c.1192C>T (p.Gln398Ter) EIF2AK3 Apr 01, 2015 MedGen:C0432217,OMIM:226980,Orphanet:ORPHA1667,SNOMED CT:254066006 Wolcott-Rallison dysplasia inherited 2 88588875 TCAGGAATGTATAGAGGCCAGCTGTATCTGCAGTCATCAGTCAGAATTTCAGAAAAGTTTC 113993978 34179 NM_002863.4(PYGL):c.1195C>T (p.Arg399Ter) PYGL May 17, 2011 MedGen:C0017925,OMIM:232700,Orphanet:ORPHA369,SNOMED CT:237971004,SNOMED CT:29291001 Glycogen storage disease, type VI not provided 14 50915869 CCCGTGGACCTGGTGGAGAAGCTGCTCCCTCGACATTTGGAAATCATTTATGAGATAAATC 1060501691 475626 NM_000051.3(ATM):c.2050C>T (p.Gln684Ter) ATM Mar 31, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 11 108253965 CACCAGTCCAGTATTGGCTTCTCTGTCCACCAGAATCTCAAGGAATCACTGGATCGCTGTC 267606916 17679 NM_153240.4(NPHP3):c.2104C>T (p.Arg702Ter) NPHP3 Feb 10, 2016 MedGen:C1858392,OMIM:604387,SNOMED CT:444749006;MedGen:C0687120,Orphanet:ORPHA655,SNOMED CT:204958008 Adolescent nephronophthisis;Nephronophthisis germline 3 132696798 GGTAAACTGGTGCAGGAGAAGAAGCTAGAACGACACTGTCGTTCTGCTACAACCTGCAATG 727503786 481244 NM_000033.3(ABCD1):c.1201C>T (p.Arg401Trp) ABCD1 Sep 13, 2017 MedGen:C0162309,OMIM:300100,Orphanet:ORPHA43,SNOMED CT:65389002 Adrenoleukodystrophy unknown X 153736231 CTCCTGACAGCGGCTGCAGATGCCATTGAGCGGATCATGTCGTCGTACAAGGAGGTACCCC -1 464397 NM_003239.4(TGFB3):c.973C>T (p.Arg325Ter) TGFB3 Jun 27, 2017 MedGen:C3553762,OMIM:614816 Loeys-Dietz syndrome 4 germline 14 75961030 TGCTGTGTGCGCCCCCTCTACATTGACTTCCGACAGGATCTGGGCTGGAAGTGGGTCCATG 952741388 372454 NM_024678.5(NARS2):c.727C>T (p.Arg243Ter) NARS2 May 08, 2015 MedGen:CN517202 not provided germline 11 78493158 ACTCAAGTGTTTACCTTTGGTCCGACCTTCCGAGCTGAAAATTCTCAGAGCCGGAGGCACC 121909581 32112 NM_015991.3(C1QA):c.622C>T (p.Gln208Ter) C1QA Jul 01, 1997 MedGen:C3150902,OMIM:613652 C1q deficiency germline 1 22639291 TTCCAGGTGGTGTCAGGGGGCATGGTGCTTCAGCTGCAGCAGGGTGACCAGGTCTGGGTTG -1 472082 NM_000033.3(ABCD1):c.293C>T (p.Ser98Leu) ABCD1 Aug 07, 2017 MedGen:C0162309,OMIM:300100,Orphanet:ORPHA43,SNOMED CT:65389002 Adrenoleukodystrophy germline X 153725559 GCCGGGAGACGGGGCTGCTGGCCCTGCACTCGGCCGCCTTGGTGAGCCGCACCTTCCTGTC 587779775 132667 NM_001101.4(ACTB):c.446C>T (p.Thr149Ile) ACTB Apr 15, 2014 MedGen:C1855722,OMIM:243310,OMIM:608578,Orphanet:ORPHA2995 Baraitser-Winter syndrome 1 germline 7 5528637 TGCTATCCCTGTACGCCTCTGGCCGTACCACTGGCATCGTGATGGACTCCGGTGACGGGGT 746979262 481826 NM_004820.4(CYP7B1):c.187C>T (p.Arg63Ter) CYP7B1 Dec 08, 2017 MedGen:CN517202 not provided germline 8 64624475 CTTCCTTATCTTGGAGTGGTCCTGAACTTACGAAAAGACCCCTTAAGGTTCATGAAAACAC 120074144 17879 NM_000019.3(ACAT1):c.814C>T (p.Gln272Ter) ACAT1 Nov 15, 2016 MedGen:C1536500,OMIM:203750,Orphanet:ORPHA134,SNOMED CT:124258007;MedGen:CN517202 Deficiency of acetyl-CoA acetyltransferase;not provided germline 11 108141688 AGCAAAGTTCCAAAGCTGAAGACAGTTTTCCAGAAAGAAAATGGTTAGTGTTAAGAAATGA 794729299 198892 NM_001256850.1(TTN):c.82828C>T (p.Arg27610Ter) TTN Aug 07, 2017 MedGen:CN517202 not provided germline 2 178557511 CCATCTACACCATGGGTCACTAATGTTACTCGAGAAAGCATCACTGTGGGCTGGCATGAAC 886041838 265124 NM_018486.2(HDAC8):c.787C>T (p.Gln263Ter) HDAC8 Jun 23, 2016 MedGen:CN517202 not provided germline X 72464682 CAAGCCTTTAATCCCAAAGCAGTGGTCTTACAGCTGGGAGCTGACACAATAGCTGGGGATC 28940875 18876 NM_000017.3(ACADS):c.1138C>T (p.Arg380Trp) ACADS May 16, 2016 MedGen:C0342783,OMIM:201470,Orphanet:ORPHA26792,SNOMED CT:124166007;MedGen:CN517202 Deficiency of butyryl-CoA dehydrogenase;not provided germline;unknown 12 120739347 ATGGGCTACGTGACAGAGATGCCGGCAGAGCGGCACTACCGCGACGCCCGCATCACTGAGA 774774648 269605 NM_003119.3(SPG7):c.637C>T (p.Arg213Ter) SPG7 Dec 14, 2015 MedGen:C1846564,OMIM:607259,Orphanet:ORPHA99013 Spastic paraplegia 7 germline 16 89526347 TCTGCCCCCCAGCGGCTAGCCTTGATGTACCGAATGCAGGTTGCAAATATTGACAAGTTTG 746000327 416845 NM_000936.3(PNLIP):c.662C>T (p.Thr221Met) PNLIP May 25, 2017 MedGen:C3280527,OMIM:614338,Orphanet:ORPHA309111 Pancreatic lipase deficiency germline 10 116555268 GCGATGCCAAATTTGTGGATGTAATTCACACGGATGGTGCCCCCATAGTCCCCAATTTGGG 71581941 39394 NM_006446.4(SLCO1B1):c.1738C>T (p.Arg580Ter) SLCO1B1 Feb 01, 2012 MedGen:C0220991,OMIM:237450,Orphanet:ORPHA3111,SNOMED CT:32891000 Rotor syndrome germline 12 21222355 CTTGCACTGGGTTTCCACTCAATGGTTATACGAGCACTAGGTATGATGAAAAAAAAAAAAA 1060503188 396674 NM_017780.3(CHD7):c.7312C>T (p.Gln2438Ter) CHD7 Jun 21, 2017 MedGen:C0265354,OMIM:214800,Orphanet:ORPHA138,SNOMED CT:47535005 CHARGE association germline 8 60856592 CGAGAGTCTCAGGTGGTCTCAGAAAATGGACAAGAAAAAGTTGTAGATTTATCAAAGGCCT 886041571 264597 NM_001197104.1(KMT2A):c.3991C>T (p.Gln1331Ter) KMT2A Mar 02, 2016 MedGen:CN517202 not provided germline 11 118482071 AAAACCACTCCTAGTGAGCCCAAGAAAAAGCAGCCTCCACCACCAGAATCAGGTGAGTGAG 690016537 150299 NM_032822.2(FAM136A):c.226C>T (p.Gln76Ter) FAM136A May 09, 2014 MedGen:C0025281,OMIM:156000,SNOMED CT:13445001 Ménière's disease germline 2 70300842 GCTTTGGTCACCAGTGAGCTGGAGAAGTTCCAGGTGAGAAATATCCTAGACAGAGCACTGT 387907074 39924 NM_032446.2(MEGF10):c.211C>T (p.Arg71Trp) MEGF10 May 01, 2012 MedGen:CN124737 Myopathy, areflexia, respiratory distress, and dysphagia, early-onset, mild variant germline 5 127339214 ACTGACATTCTAAACTGGTTTAAATGCACGCGGCACAGGTAATAGAAGCTCAGGCATGTTT 1028186690 424649 NM_020732.3(ARID1B):c.5830C>T (p.Arg1944Ter) ARID1B Jan 06, 2017 MedGen:CN029606,OMIM:135900 Coffin-Siris syndrome 1 paternal 6 157206971 ATCGCGCACTGGCAGGACTCGCTGGCTAAGCGATGCATCTGTGTGTCCAATATTGTCCGTA 312262817 49524 NM_003611.2(OFD1):c.247C>T (p.Gln83Ter) OFD1 Feb 28, 2013 MedGen:C1510460,OMIM:311200,Orphanet:ORPHA2750,SNOMED CT:52868006 Oral-facial-digital syndrome not provided X 13736613 GCCTCTAACTCTTTAGTGGCAGATCACTTACAAAGATGTGGCTATGAATATTCACTTTCTG 199422251 47538 NM_001363.4(DKC1):c.1151C>T (p.Pro384Leu) DKC1 May 10, 2012 MedGen:C1148551,OMIM:305000 Dyskeratosis congenita X-linked not provided X 154773245 ACACTTACCCTCGGAAGTGGGGTTTAGGTCCAAAGGTAAGTGGTACTGGGTTGCGTGCCCT 587779780 132732 NM_000038.5(APC):c.1213C>T (p.Arg405Ter) APC Jun 19, 2017 MedGen:CN240755;MedGen:C2713442,OMIM:175100;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Familial adenomatous polyposis;Familial adenomatous polyposis 1;Hereditary cancer-predisposing syndrome;not provided germline;unknown 5 112819245 CCTGATGACAAGAGAGGCAGGCGTGAAATCCGAGTCCTTCATCTTTTGGAACAGATACGCG 119466000 18149 NM_133259.3(LRPPRC):c.1061C>T (p.Ala354Val) LRPPRC Jan 21, 2003 MedGen:C1857355,OMIM:220111,Orphanet:ORPHA70472 Leigh syndrome, French Canadian type germline 2 43974244 TTTTAGTCACTGAAAAATTGGAAGATGTAGCGTTGCAAATTTTACTAGCATGCCCCGTATC 398123111 98237 NM_000033.3(ABCD1):c.406C>T (p.Gln136Ter) ABCD1 Mar 18, 2013 MedGen:C0162309,OMIM:300100,Orphanet:ORPHA43,SNOMED CT:65389002 Adrenoleukodystrophy germline X 153725672 GACCCGCGGGCTTTTGGCTGGCAGCTGCTGCAGTGGCTCCTCATCGCCCTCCCTGCTACCT 28939711 21214 NM_004376.6(COX15):c.649C>T (p.Arg217Trp) COX15 Apr 01, 2011 MedGen:C3554534,OMIM:615119;MedGen:C1850599 Cardioencephalomyopathy, fatal infantile, due to cytochrome c oxidase deficiency 2;Leigh syndrome due to mitochondrial complex IV deficiency germline 10 99724057 GAAGAAAAATCAGACTCCCATGACATCCCTCGGGTCAGTCAGTACCGCCTTGCTGCCCACC 758052634 439755 NM_014714.3(IFT140):c.1451C>T (p.Thr484Met) IFT140 Nov 22, 2017 MedGen:CN638473,OMIM:617781 RETINITIS PIGMENTOSA 80 germline 16 1580832 CTTTCATTTTAGGGACCTTCTTGTGTGAGACGCCTGTGTTAGCAATGCATGAAGAAAACGT 374705585 68614 NM_000492.3(CFTR):c.4426C>T (p.Gln1476Ter) CFTR May 08, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008;MedGen:C0238339,OMIM:167800,Orphanet:ORPHA676,SNOMED CT:68072000;MedGen:CN169374 Cystic fibrosis;Hereditary pancreatitis;not specified germline 7 117667091 GCTCTGAAAGAGGAGACAGAAGAAGAGGTGCAAGATACAAGGCTTTAGAGAGCAGCATAAA 886041791 264834 NM_013275.5(ANKRD11):c.2197C>T (p.Arg733Ter) ANKRD11 Mar 09, 2017 MedGen:C0220687,OMIM:148050,Orphanet:ORPHA2332;MedGen:CN517202 KBG syndrome;not provided germline;maternal 16 89284345 GACACAAACAAAGACATCAGCAGGTCTTTCCGAGAAGAGAAAGACCGTTCGAATAAAGCAG 587783845 170003 NM_000252.2(MTM1):c.637C>T (p.Leu213Phe) MTM1 Feb 08, 2013 MedGen:C0410203,OMIM:310400,Orphanet:ORPHA596,SNOMED CT:46804001 Severe X-linked myotubular myopathy germline X 150641377 GTGGTTCCGTATCGTGCCTCAGATGATGACCTCCGGAGAGTTGCAACTTTTAGGTCCCGAA 71455367 28772 NM_006249.5(PRB3):c.145C>T (p.Arg49Cys) PRB3 Oct 01, 1990 na PRB3S(CYS) germline 12 11268104 CGACGCCCACAAGGAGGAAACCAGCCCCAACGTACCCCACCTCCTCCAGGAAAGCCAGAAG 121918133 15482 NM_005581.4(BCAM):c.361C>T (p.Arg121Ter) BCAM Feb 05, 2018 MedGen:C4017284 BLOOD GROUP--LUTHERAN NULL germline 19 44812319 GTGCTGGCTGAGGCCCAGGTGGGCGACGAGCGAGACTACGTGTGCGTGGTGAGGGCAGGGG 754392766 186718 NM_138694.3(PKHD1):c.1480C>T (p.Arg494Ter) PKHD1 Jan 26, 2017 MedGen:C0085548,OMIM:263200,Orphanet:ORPHA731,SNOMED CT:28770003 Autosomal recessive polycystic kidney disease germline;unknown 6 52058355 ACCACTTACCTACGGGAGAAGCACCAGATCCGAGTCCGAGCCCAGAGGCTTCCAGAAGTAC 119463989 18257 NM_013382.5(POMT2):c.1912C>T (p.Arg638Ter) POMT2 Oct 30, 2015 MedGen:C3150411,OMIM:613150;MedGen:C3150418,OMIM:613158,Orphanet:ORPHA206559 Congenital muscular dystrophy-dystroglycanopathy with brain and eye anomalies, type A2;Limb-girdle muscular dystrophy-dystroglycanopathy, type C2 germline 14 77278849 TTGGGCCCAGGGTTGTCCCAGGTCCTGCTTCGAGGAGGCGGCCAGGTCCTGCTCGGCTGGA 774441811 195415 NM_001037633.1(SIL1):c.460C>T (p.Gln154Ter) SIL1 Oct 21, 2014 MedGen:C0024814,OMIM:248800,Orphanet:ORPHA559,SNOMED CT:80734006 Marinesco-Sjögren syndrome germline 5 139026986 TCACCTCTTTGCTGCTCTCCTTAGGCAAGGCAGGCTGAGGTAAAGCGGCTCTTCCGCCCCA 387907148 40191 NM_014639.3(TTC37):c.2251C>T (p.Gln751Ter) TTC37 Jun 01, 2010 MedGen:CN034858,OMIM:222470 Trichohepatoenteric syndrome 1 germline 5 95517186 GGAGTCCTTCTAGGTCAGAAAGAAGGAAAACAAGTATTAAAGAAAAATGAGCTCCTCCACC 397514615 48430 NM_020194.5(MFF):c.190C>T (p.Gln64Ter) MFF Dec 01, 2014 MedGen:C4310726,OMIM:617086;Human Phenotype Ontology:HP:0001263,MedGen:C4020875;MedGen:C0162666,SNOMED CT:447292006 Encephalopathy due to defective mitochondrial and peroxisomal fission 2;Global developmental delay;Mitochondrial encephalomyopathy germline 2 227330777 AAAGTAGCACCGCCAAACGCTGACCTGGAACAAGGATTCCAAGAAGGAGTTCCAAATGCTA 727503931 177045 NM_001110556.1(FLNA):c.7153C>T (p.Gln2385Ter) FLNA Mar 10, 2014 MedGen:C0265251,OMIM:311300,Orphanet:ORPHA90650,SNOMED CT:54036001;MedGen:C1848213,OMIM:300049,OMIM:300537,SNOMED CT:448227009 Oto-palato-digital syndrome, type I;Periventricular nodular heterotopia 1 germline X 154350912 CTGGAGGAGTGCTATGTCACAGAAATTGACCAAGGTGAGGCCCTGTCCCTGCCCGGCCGCC 387906849 39261 NM_004656.3(BAP1):c.799C>T (p.Gln267Ter) BAP1 Dec 01, 2011 MedGen:C3280492,OMIM:614327,Orphanet:ORPHA289539 Tumor susceptibility linked to germline BAP1 mutations unknown 3 52405897 GGATTCTGTTGTTAGCTGATAAGAGTAACACAGCCAGAGCTGATTCAGACCCACAAGTCTC 121908893 21465 NM_003060.3(SLC22A5):c.760C>T (p.Arg254Ter) SLC22A5 Apr 17, 2017 MedGen:C0342788,OMIM:212140,Orphanet:ORPHA158,SNOMED CT:21764004;MedGen:CN517202;MedGen:CN169374 Renal carnitine transport defect;not provided;not specified germline;unknown 5 132385435 ATGGTGCTGCCACTGTTTGCTTACTTCATCCGAGACTGGCGGATGCTGCTGGTGGCGCTGA 796052463 202824 NM_005249.4(FOXG1):c.586C>T (p.Gln196Ter) FOXG1 Nov 27, 2012 MedGen:CN517202 not provided germline 14 28767865 TACAACGCGCTCATCATGATGGCCATCCGGCAGAGCCCCGAGAAGCGGCTCACGCTCAACG 878855234 238147 NM_170707.3(LMNA):c.928C>T (p.Gln310Ter) LMNA Mar 11, 2016 MedGen:CN043576 Charcot-Marie-Tooth disease, type 2 germline 1 156135304 GACAGCCTCTCTGCCCAGCTCAGCCAGCTCCAGAAGCAGGTGATACCCCACCTCACCCCTC 1064797038 411021 NM_001429.3(EP300):c.319C>T (p.Gln107Ter) EP300 Mar 28, 2017 MedGen:CN517202 not provided germline 22 41117411 GTTGGTGGCCCAGGTCAAGTCATGGCCAGCCAGGCCCAACAGAGCAGTCCTGGATTAGGTT 397516428 52711 NM_000441.1(SLC26A4):c.2188C>T (p.Gln730Ter) SLC26A4 Dec 06, 2010 Human Phenotype Ontology:HP:0011387,MedGen:C1863752,OMIM:600791;MedGen:C0271829,OMIM:274600,Orphanet:ORPHA705,SNOMED CT:70348004 Enlarged vestibular aqueduct;Pendred's syndrome germline 7 107710152 TTGACGGTCCATGATGCTATACTCTATCTACAGAACCAAGTGAAATCTCAAGAGGGTCAAG 1057524089 378038 NM_000833.4(GRIN2A):c.487C>T (p.Gln163Ter) GRIN2A Jan 27, 2017 MedGen:C1832814,OMIM:245570;MedGen:CN517202 Epilepsy, focal, with speech disorder and with or without mental retardation;not provided germline 16 9938479 CAGCAAGCCACGGTCATGCTGAAGATCATGCAGGATTATGACTGGCATGTCTTCTCCCTGG 886040720 261423 NM_000059.3(BRCA2):c.7615C>T (p.Gln2539Ter) BRCA2 Nov 22, 2016 MedGen:C2675520,OMIM:612555;MedGen:CN517202 Breast-ovarian cancer, familial 2;not provided germline 13 32356607 GGCCAAGTTCCCTCTGCGTGTTCTCATAAACAGGTATGTGTTTGTCTACAATACTGATGGC 1064793880 407251 NM_000501.3(ELN):c.631C>T (p.Pro211Ser) ELN Aug 10, 2015 MedGen:CN517202 not provided germline 7 74046755 GGAGTCCCACTGGGGTATCCCATCAAGGCCCCCAAGCTGCCTGGTAAGTCAGAGGGACGGT 61751449 26882 NM_004992.3(MECP2):c.964C>T (p.Pro322Ser) MECP2 Apr 26, 2016 MedGen:C1968550,OMIM:300055;MedGen:C0035372,OMIM:312750,Orphanet:ORPHA778,SNOMED CT:68618008 Mental retardation, X-linked, syndromic 13;Rett syndrome germline;unknown X 154030864 GTCAGCATCGAGGTCAAGGAAGTGGTGAAGCCCCTGCTGGTGTCCACCCTCGGTGAGAAGA 121918160 15719 NM_000312.3(PROC):c.935C>T (p.Ser312Leu) PROC Mar 09, 2017 MedGen:C2674321,OMIM:176860 Thrombophilia, hereditary, due to protein C deficiency, autosomal dominant germline 2 127428495 TGCTGCACCTGGCCCAGCCCGCCACCCTCTCGCAGACCATAGTGCCCATCTGCCTCCCGGA 369488112 214356 NM_015681.4(B9D1):c.466C>T (p.Arg156Trp) B9D1 Feb 23, 2015 Human Phenotype Ontology:HP:0002335,MedGen:C0431399,Orphanet:ORPHA475,SNOMED CT:253175003,SNOMED CT:716997004 Joubert syndrome unknown 17 19343796 GACCCCAAGGTGGTGGCTCAGGGTGAAGGCCGGGAAGGTAAAGCTCCCTCCCCTCTCTTAC 140287375 39763 NM_018418.4(SPATA7):c.253C>T (p.Arg85Ter) SPATA7 May 09, 2011 MedGen:C1858677,OMIM:604232 Leber congenital amaurosis 3 germline 14 88416725 TTGTTTTCCCTTTTAGATGCAGACCAACAACGAAGAGAGAAACTCAAAAAGGAATTAGCAC 104894526 22748 NM_000303.2(PMM2):c.484C>T (p.Arg162Trp) PMM2 Dec 31, 2015 MedGen:C0349653,OMIM:212065,Orphanet:ORPHA79318,SNOMED CT:277893002;MedGen:CN517202 Carbohydrate-deficient glycoprotein syndrome type I;not provided germline;unknown 16 8811674 AATATAAGACAAAAGTTTGTAGCAGATCTACGGAAAGAGTTTGCTGGAAAAGGCCTCACGT 730882131 181214 NM_000314.6(PTEN):c.781C>T (p.Gln261Ter) PTEN Jun 12, 2015 MedGen:C1959582,OMIM:601728,Orphanet:ORPHA306498;MedGen:CN517202 PTEN hamartoma tumor syndrome;not provided germline 10 87957999 GGTGATATCAAAGTAGAGTTCTTCCACAAACAGAACAAGATGCTAAAAAAGGTTTGTACTT -1 461534 NM_000051.3(ATM):c.5944C>T (p.Gln1982Ter) ATM Apr 16, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005 Ataxia-telangiectasia syndrome germline 11 108312436 AACAGAAGTCTTGCATTTGAAGAAGGAAGCCAGAGTACAACTATTTCTAGCTTGAGTGAAA 755177846 263789 NM_005993.4(TBCD):c.3365C>T (p.Pro1122Leu) TBCD Nov 16, 2016 MedGen:C4310671,OMIM:617193 Encephalopathy, progressive, early-onset, with brain atrophy and thin corpus callosum germline 17 82938132 AGCTGTGTCTGCTCCTCTGCCACCGTTTCCCGCTGGTGAGTGCCTGCCCCTGCTCACGTGT 111033626 25943 NM_002351.4(SH2D1A):c.302C>T (p.Pro101Leu) SH2D1A Oct 01, 1998 MedGen:C1868674,OMIM:308240 Lymphoproliferative syndrome 1, X-linked germline X 124370276 ATCAAGGCATTGTAATACCTCTGCAGTATCCAGTTGAGAAGAAGTCCTCAGCTAGAAGTAC 587783727 168936 NM_003482.3(KMT2D):c.8053C>T (p.Arg2685Ter) KMT2D Aug 22, 2013 MedGen:CN030661,OMIM:147920 Kabuki syndrome 1 germline 12 49039611 TCCTCTTCTCTTTTTTTTGCATAGCGCCAGCGACTACGAGAGCTGCTGATTCGGCAGCAGA 202155613 261530 NM_000059.3(BRCA2):c.9106C>T (p.Gln3036Ter) BRCA2 Oct 18, 2016 MedGen:C2675520,OMIM:612555;MedGen:CN517202 Breast-ovarian cancer, familial 2;not provided germline 13 32379902 CAGTTAGCAGCGACAAAAAAAACTCAGTATCAACAACTACCGGTACAAACCTTTCATTGTA 747386965 427031 NM_001171.5(ABCC6):c.1199C>T (p.Ser400Phe) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16198160 CCCGCCAGGTCCTGGCTCTGTCCAGCGGCTCCAGAAAGGCCAGTGCGGTGGGTGATGTGGT 777112652 236878 NM_033312.2(CDC14A):c.1015C>T (p.Arg339Ter) CDC14A Jun 02, 2016 MedGen:C4310777,OMIM:616958 Deafness, autosomal recessive 105 germline 1 100484329 GCATCGTTGTGGGTCCAAGGAGACATTTTCCGATCCAAACTGAAAAATCGACCATCCAGTG 121908429 20370 NM_005135.2(SLC12A6):c.466C>T (p.Arg156Cys) SLC12A6 Aug 12, 2011 MedGen:C0795950,OMIM:218000,Orphanet:ORPHA1496 Andermann syndrome germline 15 34257713 CAAAATATTTTTGGAGTGATCCTTTTTTTACGCCTTACATGGGTGGTGGGCACAGCTGGAG 59101996 49661 NM_006158.4(NEFL):c.446C>T (p.Ala149Val) NEFL Oct 18, 2012 MedGen:C1843164,OMIM:607734,Orphanet:ORPHA101085;MedGen:CN517202 Charcot-Marie-Tooth disease, demyelinating, type 1f;not provided not provided 8 24956070 ACGAGCAGGAGATCCGCGACCTGCGCCTGGCGGCGGAAGATGCCACCAACGAGAAGCAGGC 80338651 18853 NM_000081.3(LYST):c.3085C>T (p.Gln1029Ter) LYST Feb 16, 2012 MedGen:CN068761;MedGen:C0007965,OMIM:214500,Orphanet:ORPHA167,SNOMED CT:111396008 Chediak-Higashi syndrome, childhood type;Chédiak-Higashi syndrome germline 1 235806051 AATGAAAACCAGGATTTAAACAGAATTTCTCAACCTAAGAGAACTATGAAGGAAGATTTAT 121918244 16869 NM_001023570.3(IQCB1):c.1381C>T (p.Arg461Ter) IQCB1 Jan 16, 2016 MedGen:C0687120,Orphanet:ORPHA655,SNOMED CT:204958008;Human Phenotype Ontology:HP:0000556,MedGen:C0854723,Orphanet:ORPHA71862,SNOMED CT:314407005;MedGen:C1836517,OMIM:609254 Nephronophthisis;Retinal dystrophy;Senior-Loken syndrome 5 germline;unknown 3 121781772 ACTGATGCACGCCGAGTTGAACTGAAGAAACGAGTGGATGACTATGTCAGAAGACATTTGG -1 473864 NM_000038.5(APC):c.5572C>T (p.Arg1858Ter) APC Oct 06, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 5 112841166 CCTATTGAAGGAACTCCTTACTGTTTTTCACGAAATGATTCTTTGAGTTCTCTAGATTTTG 776056840 374330 NM_000781.2(CYP11A1):c.358C>T (p.Arg120Ter) CYP11A1 Mar 30, 2015 MedGen:CN517202 not provided germline 15 74347967 CTCTTTAAGTCCGAGGGCCCCAACCCAGAACGATTCCTCATCCCGCCCTGGGTCGCCTATC 104894943 26368 NM_001109878.1(TBX22):c.779C>T (p.Thr260Met) TBX22 Oct 01, 2001 MedGen:C1844831 Cleft palate with ankyloglossia germline X 80026849 CCTTTAAAGAAACTGAGTTCACCACAGTAACGGCTTACCAAAACCAACAGGTAAACTTGGT 63751215 426863 NM_001171.5(ABCC6):c.3661C>T (p.Arg1221Cys) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16159556 CAGGTGACCCAGACACTGCAGTGGGTTGTTCGCAACTGGACAGACCTAGAGAACAGCATCG 139228801 188307 NM_001232.3(CASQ2):c.923C>T (p.Pro308Leu) CASQ2 Feb 06, 2017 MedGen:C1631597,Orphanet:ORPHA3286;MedGen:CN517202 Catecholaminergic polymorphic ventricular tachycardia;not provided germline 1 115705208 ACCCCGATCTGAGCATCCTGTGGATCGACCCGGACGACTTTCCTCTGGTGAGTGGCTCCAG 371443644 107257 NM_000339.2(SLC12A3):c.179C>T (p.Thr60Met) SLC12A3 Aug 31, 2016 MedGen:C0268450,OMIM:263800,Orphanet:ORPHA358,SNOMED CT:3188003;MedGen:CN517202 Familial hypokalemia-hypomagnesemia;not provided germline 16 56865414 CCTTCTGCATGCGCACCTTTGGCTACAACACGATCGATGTGGTGCCCACATATGAGCACTA 183501729 39396 NM_006446.4(SLCO1B1):c.757C>T (p.Arg253Ter) SLCO1B1 Feb 01, 2012 MedGen:C0220991,OMIM:237450,Orphanet:ORPHA3111,SNOMED CT:32891000 Rotor syndrome germline 12 21196975 GGCACTATCAGGATAACTCCTACTGATTCTCGATGGGTTGGAGCTTGGTGGCTTAATTTCC 128621204 26422 NM_000061.2(BTK):c.1684C>T (p.Arg562Trp) BTK Aug 31, 2011 MedGen:C1832241,OMIM:601495,Orphanet:ORPHA33110;MedGen:C0221026,OMIM:300755,Orphanet:ORPHA47,SNOMED CT:65880007 Agammaglobulinemia, non-Bruton type;X-linked agammaglobulinemia germline X 101353936 ACAAGCTCAGTAGGCTCCAAATTTCCAGTCCGGTGGTCCCCACCGGAAGTCCTGATGTATA 1131691311 422035 NM_000138.4(FBN1):c.3757C>T (p.Gln1253Ter) FBN1 May 05, 2017 MedGen:CN517202 not provided germline 15 48483899 GAAGATAATCCCAATATCTGTGATGGTGGTCAGTGCACAAATATCCCTGGAGAGTACAGGT 786204763 186785 NM_000155.3(GALT):c.775C>T (p.Arg259Trp) GALT Jun 08, 2015 MedGen:C0268151,OMIM:230400,Orphanet:ORPHA79239,SNOMED CT:124354006 Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase germline;unknown 9 34648849 TGGCCCTACCAGACACTGCTGCTGCCCCGTCGGCATGTGCGGCGGCTACCTGAGCTGACCC 546693824 359132 NM_176869.2(PPA2):c.500C>T (p.Pro167Leu) PPA2 Nov 23, 2016 MedGen:C4310664,OMIM:617222 Sudden cardiac failure, infantile germline 4 105437978 AGAGCACGAACTGCTTTGGAGATAATGATCCTATTGATGTTTGCGAAATAGGCTCAAAGGT 200520583 433182 NM_000296.3(PKD1):c.8905C>T (p.Gln2969Ter) PKD1 Oct 26, 2016 MedGen:CN169374 not specified germline 16 2102857 GCTAGCAGGAGGATCCGCCCAGAGTCACTCCAGGGTGCTGACCACCGGCCCTACACCTTCT 398124301 101617 NM_015560.2(OPA1):c.2257C>T (p.Gln753Ter) OPA1 Apr 17, 2013 MedGen:C0338508,OMIM:165500,Orphanet:ORPHA98672,SNOMED CT:2065009 Dominant hereditary optic atrophy germline 3 193658977 GCAGCTATTTATTTTATGGAAGAGGCTCTGCAGGCTCGTCTCAAGGATAGTAAGTGGAGAC 121918203 16113 NM_001127897.3(RPGRIP1L):c.2614C>T (p.Gln872Ter) RPGRIP1L Sep 20, 2013 MedGen:C1969053,OMIM:611560;MedGen:C1969052,OMIM:611561 Joubert syndrome 7;Meckel syndrome type 5 germline 16 53645694 AGTTTTTATGTTTTTGATGATAGTGATACCCAGGAGAATATTTACATAGGAAAAGTCAATG 961191529 482117 NM_017775.3(TTC19):c.304C>T (p.Arg102Ter) TTC19 Nov 27, 2017 MedGen:CN517202 not provided germline 17 16000237 GCCGAGGCAGAGATCATCCAGCTGCTGAAGCGAGCCAAGGTGAGGCGGCTCCGGGCCCTGC -1 444795 NM_024426.4(WT1):c.1105C>T (p.Arg369Ter) WT1 Jul 18, 2017 MedGen:CN517202 not provided germline 11 32396401 CTTCCTCTTACTCTCTGCCTGCAGGATGTGCGACGTGTGCCTGGAGTAGCCCCGACTCTTG 782099475 378457 NM_001111125.2(IQSEC2):c.2507C>T (p.Ala836Val) IQSEC2 May 03, 2017 MedGen:CN517202 not provided germline X 53248189 TGGACTTCTCCTCCATGGATCTGGATGATGCGCTCCGGAAGTTCCAGTCCCATATCCGGGT 730880539 179317 NM_000256.3(MYBPC3):c.1405C>T (p.Gln469Ter) MYBPC3 Nov 11, 2013 MedGen:CN517202 not provided germline 11 47342882 CCCTTGGAGGACCAGCTGGTGATGGTGGGGCAGCGGGTGGAGTTTGAGTGTGAAGTATCGG 121908427 20365 NM_133647.1(SLC12A6):c.3031C>T (p.Arg1011Ter) SLC12A6 Jun 15, 2017 MedGen:C0795950,OMIM:218000,Orphanet:ORPHA1496 Andermann syndrome germline;unknown 15 34236719 CTCCGGCACATGCGGCTATCCAAAACAGAGCGAGACAGAGAGGTGAGACATTACTGCATCA 142164373 44264 NM_032634.3(PIGO):c.2869C>T (p.Leu957Phe) PIGO Aug 01, 2012 MedGen:C3553637,OMIM:614749 Hyperphosphatasia with mental retardation syndrome 2 germline 9 35090266 CCCTCTCTTGAGGCAGTAGGTTGCCCACTGCTCCTGCTCTGGCCTTTCCTGTGTGAGAGTC 121917888 26709 NM_005333.4(HCCS):c.589C>T (p.Arg197Ter) HCCS Aug 18, 2011 MedGen:C0796070,OMIM:309801 Linear skin defects with multiple congenital anomalies 1 germline X 11120974 GGGAAAGCAAAAGAGTATTCACCAAGGGCACGAATTCGTTCCTGGATGGGGTGAGTGTCAG 281865028 46978 NM_024312.4(GNPTAB):c.2533C>T (p.Gln845Ter) GNPTAB May 10, 2012 MedGen:C2673377,OMIM:252500,Orphanet:ORPHA576 I cell disease not provided 12 101764384 CCCCCATCTCTGATTGTTCCACTGGAAAGCCAGATGACAAAAGAAAAGAAAATCACAGGGA 121912866 32394 NM_001844.4(COL2A1):c.2794C>T (p.Arg932Ter) COL2A1 Jul 12, 2016 MedGen:C2020284,OMIM:108300 Stickler syndrome type 1 germline 12 47978698 CCTTCTGGAAAAGATGGTCCCAAAGGTGCTCGAGGAGACAGCGGCCCCCCTGGCCGAGCTG 797045593 208434 NM_005257.5(GATA6):c.1087C>T (p.Gln363Ter) GATA6 Oct 29, 2014 MedGen:C1838780,OMIM:600001 Pancreatic agenesis and congenital heart disease germline 18 22172231 CCCTTCGAGACCCCGGTGCTGCACAGCCTGCAGAGCCGCGCCGGAGCCCCGCTCCCGGTGC 376531637 483112 NM_178170.2(NEK8):c.1043C>T (p.Thr348Met) NEK8 Feb 14, 2018 MedGen:C3809434,OMIM:615415 Renal-hepatic-pancreatic dysplasia 2 germline 17 28737972 CAGCTGGGCGCACGCAGAAAGCCGGCGTCACGCGCTCTGGGCGTCTCATCCTGTGGGAGGT 80356982 69227 NM_007294.3(BRCA1):c.2410C>T (p.Gln804Ter) BRCA1 Sep 08, 2016 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome germline 17 43093121 GCAAAAACAGAACCAAATAAATGTGTGAGTCAGTGTGCAGCATTTGAAAACCCCAAGGGAC 587784077 168128 NM_022455.4(NSD1):c.1831C>T (p.Arg611Ter) NSD1 Sep 16, 2015 MedGen:CN035106,OMIM:117550;MedGen:CN517202 Sotos syndrome 1;not provided germline 5 177210230 AAGTGTTCTCGAGAGAAGAATAAACCCCAACGAAGCCTGGTGTGTGGTTCAAAAGTGAAGC 757583846 185963 NM_000312.3(PROC):c.169C>T (p.Arg57Trp) PROC Jul 14, 2017 MedGen:C2674321,OMIM:176860;MedGen:CN517202 Thrombophilia, hereditary, due to protein C deficiency, autosomal dominant;not provided germline 2 127421381 CTGGAGGAGCTCCGTCACAGCAGCCTGGAGCGGGAGTGCATAGAGGAGATCTGTGACTTCG 373941682 361789 NM_022469.3(GREM2):c.38C>T (p.Ala13Val) GREM2 Dec 29, 2016 MedGen:C4310638,OMIM:617275 Tooth agenesis, selective, 9 germline 1 240493438 GGAAGCTTTCCCTGTCCTTGTTCCTGGTGGCGGTGCTGGTGAAGGTGGCGGAAGCCCGGAA 113249837 51552 NM_000138.4(FBN1):c.5368C>T (p.Arg1790Ter) FBN1 Jun 08, 2017 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:CN118826,Orphanet:ORPHA91387;MedGen:CN517202 Marfan syndrome;Thoracic aortic aneurysm and aortic dissection;not provided germline 15 48456691 GGAGTGTGTATCAACATGGTTGGCAGCTTCCGATGTGAATGTCCAGTGGGATTCTTCTATA 758745099 443929 NM_032861.3(SERAC1):c.1102C>T (p.Arg368Ter) SERAC1 Sep 20, 2017 MedGen:CN517202 not provided germline 6 158120489 CACGCTGCCAGAATCCTGGCAAATCTAGACCGAGAAACTGTGCAAGAAAAATATCAGGATG 606231423 170959 NM_016026.3(RDH11):c.199C>T (p.Arg67Ter) RDH11 Mar 03, 2015 MedGen:C4015242,OMIM:616108,Orphanet:ORPHA436245 Retinal dystrophy, juvenile cataracts, and short stature syndrome germline;paternal 14 67692588 TTCTCTTTCATATGTTGGCTGACAGGAGCTCGAGTATATTTAGCTTGCCGGGATGTGGAAA 104894936 26673 NM_006517.4(SLC16A2):c.449C>T (p.Ala150Val) SLC16A2 Jun 15, 2017 MedGen:C0795889,OMIM:300523,Orphanet:ORPHA59 Allan-Herndon-Dudley syndrome germline X 74521008 TTTTCTCTGCAGCATGGGTCGGAGCCCTCGCGATGGGTATGATCTTCTTCTGTTCTCCCAT 79378857 359583 NM_000094.3(COL7A1):c.4373C>T (p.Pro1458Leu) COL7A1 Jun 02, 2015 MedGen:CN517202 not provided germline 3 48583584 GTGACTCTGAGGATGGAGCTCCAGGCCTCCCAGGACAACCTGGGTCTCCGGGTGAGCAGGT 121908440 20591 NM_005708.4(GPC6):c.700C>T (p.Arg234Ter) GPC6 Jun 01, 2009 MedGen:C1850318,OMIM:258315,Orphanet:ORPHA93329 Omodysplasia 1 germline 13 93830534 GGGCTGACTGTGGGCAGAGAAGTTGCAAACCGAGTTTCCAAGGTAATTGAAAACGTGCTTT 864622269 222374 NM_015915.4(ATL1):c.1483C>T (p.Arg495Trp) ATL1 Jun 04, 2017 MedGen:C2931355,OMIM:182600,Orphanet:ORPHA100984;MedGen:CN517202 Spastic paraplegia 3;not provided germline 14 50628394 CTTATCACCCTGTGCACTTGGGCATATATCCGGTACTCTGGAGAATACCGAGAGCTGGGAG 587783442 168611 NM_017780.3(CHD7):c.4480C>T (p.Arg1494Ter) CHD7 Oct 27, 2017 MedGen:C0265354,OMIM:214800,Orphanet:ORPHA138,SNOMED CT:47535005 CHARGE association germline;unknown 8 60838202 GAAGAAGATATTGATCAGATCCTCCTACGTCGAACCCACACCATTACCATTGAGTCAGAAG 587783805 170071 NM_000252.2(MTM1):c.1558C>T (p.Arg520Ter) MTM1 Feb 08, 2013 MedGen:C0410203,OMIM:310400,Orphanet:ORPHA596,SNOMED CT:46804001 Severe X-linked myotubular myopathy germline X 150663523 AAAAACCCCTTCTATACTAAAGAAATCAATCGAGTTTTATATCCAGTTGCCAGTATGCGTC 781496816 186943 NM_000137.2(FAH):c.520C>T (p.Arg174Ter) FAH Nov 03, 2016 MedGen:C0268490,OMIM:276700,Orphanet:ORPHA882,SNOMED CT:124536006,SNOMED CT:410056006;MedGen:CN517202 Tyrosinemia type I;not provided germline;unknown 15 80168116 TCCTCTGTCGTGGTGTCTGGCACCCCAATCCGAAGGCCCATGGGACAGATGAAACCTGATG 398123827 100321 NM_004006.2(DMD):c.10033C>T (p.Arg3345Ter) DMD May 22, 2017 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009;MedGen:C3668940,OMIM:302045;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001;MedGen:CN517202 Becker muscular dystrophy;Dilated cardiomyopathy 3B;Duchenne muscular dystrophy;not provided germline X 31180423 GACATCTGCCAAAGCTGCTTTTTTTCTGGTCGAGTTGCAAAAGGCCATAAAATGCACTATC 794728196 197754 NM_000138.4(FBN1):c.2671C>T (p.Gln891Ter) FBN1 Nov 01, 2012 MedGen:CN517202 not provided germline 15 48495129 GCTGCGTGGGGAAGCCCGTGCACCCTATGCCAAGTTGGTAAGAGAAACCCATGCTGTGGTT 202247820 47481 NM_000532.4(PCCB):c.1495C>T (p.Arg499Ter) PCCB May 23, 2017 Human Phenotype Ontology:HP:0003353,MedGen:C0268579,OMIM:606054,Orphanet:ORPHA35 Propionic acidemia germline 3 136328854 AAGTTTGCCAACCCTTTCCCTGCAGCAGTGCGAGGTAGGGGACTGTGGTGAAGAGGGCAGC 727503483 389230 NM_138691.2(TMC1):c.1532C>T (p.Pro511Leu) TMC1 Jun 04, 2016 MedGen:C1832978,OMIM:600974 Deafness, autosomal recessive 7 germline 9 72792318 CACCCTTTTTTGTTCACCCTGCAGATGTACCTCGAGGACCTTGCTGGGAAACAATGGTGGG 104894082 21004 NM_006269.1(RP1):c.2029C>T (p.Arg677Ter) RP1 Mar 23, 2016 MedGen:C0220701,OMIM:180100;MedGen:CN517202 Retinitis pigmentosa 1;not provided germline 8 54625911 TCTGTTGCCAGCAAAAAGAAGAAAAAATCTCGACAGCAAGCAATAAATTCCAGGTATCAAG 56984562 57210 NM_170707.3(LMNA):c.1621C>T (p.Arg541Cys) LMNA Aug 16, 2017 MedGen:CN230736;MedGen:CN043576;MedGen:C1449563,OMIM:115200,Orphanet:ORPHA300751;EFO:EFO_0000407,Human Phenotype Ontology:HP:0001644,MedGen:C0007193,Orphanet:ORPHA217604,SNOMED CT:195021004;MedGen:CN517202 Cardiovascular phenotype;Charcot-Marie-Tooth disease, type 2;Dilated cardiomyopathy 1A;Primary dilated cardiomyopathy;not provided germline 1 156137666 GTTCCATGTCCCCACCAGGAAGTGGCCATGCGCAAGCTGGTGCGCTCAGTGACTGTGGTTG 132630304 26094 NM_000252.2(MTM1):c.205C>T (p.Arg69Cys) MTM1 Feb 08, 2013 MedGen:C0410203,OMIM:310400,Orphanet:ORPHA596,SNOMED CT:46804001 Severe X-linked myotubular myopathy germline X 150598660 ATTAAGGGAAGAGTTTACATCACAAATTATCGTCTTTATTTAAGAAGTTTGGAAACGGTAA 864622143 221777 NM_002485.4(NBN):c.1747C>T (p.Gln583Ter) NBN Aug 08, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0398791,OMIM:251260,Orphanet:ORPHA647,SNOMED CT:234638009 Hereditary cancer-predisposing syndrome;Microcephaly, normal intelligence and immunodeficiency germline 8 89953342 GAGTTAGAAATTGATGTGAAAGTTCAAAAACAGGAGGAAGATGTCAATGTTAGAAAAAGGC 869312992 226858 NM_000048.3(ASL):c.889C>T (p.Arg297Trp) ASL - MedGen:C0268547,OMIM:207900,Orphanet:ORPHA23,SNOMED CT:41013004 Argininosuccinate lyase deficiency germline 7 66089146 AAGAAAAACCCCGACAGTTTGGAGCTGATCCGGAGCAAGGCTGGGCGTGTGTTTGGGCGGG 104893809 27546 NM_003242.5(TGFBR2):c.1609C>T (p.Arg537Cys) TGFBR2 May 07, 2017 MedGen:C2674876,OMIM:610168;MedGen:CN118826,Orphanet:ORPHA91387;MedGen:CN517202 Loeys-Dietz syndrome 2;Thoracic aortic aneurysm and aortic dissection;not provided germline 3 30691504 GCCCGTCTCACAGCCCAGTGTGTGGCAGAACGCTTCAGTGAGCTGGAGCATCTGGACAGGC 794726799 187842 NM_001165963.1(SCN1A):c.1129C>T (p.Arg377Ter) SCN1A Jun 07, 2017 MedGen:C0393706,Orphanet:ORPHA1934;MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002;MedGen:CN517202 Early infantile epileptic encephalopathy;Severe myoclonic epilepsy in infancy;not provided de novo;germline 2 166047668 ACCTTCAGTTGGGCTTTTTTGTCCTTGTTTCGACTAATGACTCAGGACTTCTGGGAAAATC -1 444652 NM_012330.3(KAT6B):c.3349C>T (p.Gln1117Ter) KAT6B Jun 28, 2017 MedGen:CN517202 not provided germline 10 75022208 CAAAGCTCTCCCCCAAGATTGACGAAACCACAGTCAGTTGCCATAAAGAGAAAGGTAGGTG 72653761 427036 NM_001171.5(ABCC6):c.1144C>T (p.Arg382Trp) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16202033 TACAGGCTCAAGGTGCTGCAGATGAGGTTGCGGTCGGCCATCACTGGCCTGGTGTACAGAA 28935468 26863 NM_004992.3(MECP2):c.916C>T (p.Arg306Cys) MECP2 Aug 24, 2017 MedGen:C0162635,OMIM:105830,Orphanet:ORPHA72,SNOMED CT:76880004;MedGen:C0162635,OMIM:105830,Orphanet:ORPHA72,SNOMED CT:76880004;Human Phenotype Ontology:HP:0001249,MedGen:C1843367;MedGen:C1968550,OMIM:300055;MedGen:C1968550,OMIM:300055;MedGen:C0035372,OMIM:312750,Orphanet:ORPHA778,SNOMED CT:68618008;MedGen:C0035372,OMIM:312750,Orphanet:ORPHA778,SNOMED CT:68618008;MedGen:CN517202 Angelman syndrome;Angelman syndrome;Intellectual disability;Mental retardation, X-linked, syndromic 13;Mental retardation, X-linked, syndromic 13;Rett syndrome;Rett syndrome;not provided de novo;germline;unknown X 154030912 GTGCAGGAGACCGTACTCCCCATCAAGAAGCGCAAGACCCGGGAGACGGTCAGCATCGAGG 63751707 95881 NM_000249.3(MLH1):c.882C>T (p.Leu294=) MLH1 Nov 07, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Hereditary cancer-predisposing syndrome;Lynch syndrome germline 3 37017597 GCCCAAAAACACACACCCATTCCTGTACCTCAGGTAATGTAGCACCAAACTCCTCAACCAA 746260871 190187 NM_033026.5(PCLO):c.10624C>T (p.Arg3542Ter) PCLO Apr 28, 2015 Gene:373073,MedGen:C1842687,OMIM:608027,Orphanet:ORPHA97249 Pontocerebellar hypoplasia type 3 germline 7 82949964 GGAACCATAAGAACACCCTCCATACGGGCACGAGTGGATGCCAAGGTAGAAATAATTAAAC 875989851 227738 NM_013334.3(GMPPB):c.308C>T (p.Pro103Leu) GMPPB May 13, 2016 MedGen:C3714932,OMIM:615352,Orphanet:ORPHA363623 Muscular dystrophy-dystroglycanopathy (limb-girdle), type c, 14 germline 3 49723066 CCCGTGACCTACTCTCTGAGACTGCAGACCCTTTCTTCGTCCTCAACAGTGACGTGATCTG 121909104 22312 NM_005603.5(ATP8B1):c.1367C>T (p.Thr456Met) ATP8B1 Oct 15, 2004 MedGen:C0268312,OMIM:211600,Orphanet:ORPHA172,SNOMED CT:74162007 Progressive intrahepatic cholestasis germline 18 57688361 GGCAGATCCATTATATCTTCTCTGATAAGACGGGGACACTCACACAAAATATCATGACCTT 387906724 38937 NM_032121.5(MAGT1):c.409C>T (p.Arg137Ter) MAGT1 Apr 05, 2017 MedGen:C3275445,OMIM:300853,Orphanet:ORPHA317476;MedGen:CN517202 Immunodeficiency, X-Linked, with magnesium defect, Epstein-Barr virus infection, and neoplasia;not provided germline X 77870885 GAAGAATTCCAGATCCTGGCAAACTCCTGGCGATACTCCAGTGCATTCACCAACAGGATAT 879255270 227656 NM_006015.4(ARID1A):c.5965C>T (p.Arg1989Ter) ARID1A Dec 20, 2013 MedGen:C3553247,OMIM:614607 Mental retardation, autosomal dominant 14 somatic 1 26779863 AAGCGCTGCGTCTGTGTGTCCAATACCATTCGAAGCCTGTCATTTGTGCCAGGCAATGACT 886037771 227163 NM_017909.3(RMND1):c.1303C>T (p.Leu435Phe) RMND1 Dec 22, 2015 MedGen:C0751651,Orphanet:ORPHA68380 Mitochondrial diseases germline 6 151405734 GCACTCCGCTTGGAGTGGATGATTGTCATCCTCATTACCATAGAGGTAAGATGGAAATGCT 761743852 440766 NM_015560.2(OPA1):c.703C>T (p.Arg235Ter) OPA1 Oct 21, 2016 MedGen:CN517202 not provided germline 3 193635442 TTGCAGTTGAAGTATCAGAGAATCTTGGAACGATTAGAAAAGGAGAACAAAGAATTGAGAA 398123903 100430 NM_004006.2(DMD):c.2650C>T (p.Gln884Ter) DMD May 03, 2017 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009;MedGen:C3668940,OMIM:302045;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001;MedGen:CN517202 Becker muscular dystrophy;Dilated cardiomyopathy 3B;Duchenne muscular dystrophy;not provided germline X 32485072 CAGGATGAAGTCAACCGGCTATCAGATCTTCAACCTCAAATTGAACGATTAAAAATTCAAA 886040237 261638 NM_007294.3(BRCA1):c.4573C>T (p.Gln1525Ter) BRCA1 Jul 03, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome germline 17 43074433 GGGAGTCTTCAGAATAGAAACTACCCATCTCAAGAGGAGCTCATTAAGGTTGTTGATGTGG 121913324 363213 NM_000455.4(STK11):c.109C>T (p.Gln37Ter) STK11 Feb 15, 2017 MedGen:C0027672,SNOMED CT:699346009;MeSH:D009369,MedGen:C0027651,SNOMED CT:108369006;MeSH:D010580,MedGen:C0031269,OMIM:175200,Orphanet:ORPHA2869,SNOMED CT:54411001 Hereditary cancer-predisposing syndrome;Neoplasm;Peutz-Jeghers syndrome germline;somatic 19 1207022 CACCGCATCGACTCCACCGAGGTCATCTACCAGCCGCGCCGCAAGCGGGCCAAGCTCATCG -1 440106 NM_018051.4(WDR60):c.2284C>T (p.Arg762Ter) WDR60 Jun 01, 2017 MedGen:CN674505 Short-rib polydactyly syndrome type III maternal 7 158926213 CCAGATGGAATCCTTACCTCAGTAAACCACCGAAGCCCTCTTCAAGCAGTAGAACCTATCT 879254570 245629 NM_000527.4(LDLR):c.544C>T (p.Gln182Ter) LDLR Mar 25, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11105450 GACTGCGAAGATGGCTCGGATGAGTGGCCGCAGCGCTGTAGGGGTCTTTACGTGTTCCAAG 397516127 52044 NM_000257.3(MYH7):c.1987C>T (p.Arg663Cys) MYH7 Aug 31, 2017 MedGen:C0546264,OMIM:255310,Orphanet:ORPHA2020,SNOMED CT:240084007;MedGen:C1834481,OMIM:613426;MedGen:C3495498,OMIM:192600;Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569;MedGen:CN074249,OMIM:160500,Orphanet:ORPHA59135;Gene:619511,MedGen:C1850709,OMIM:255160;MedGen:C1842160,OMIM:608358,SNOMED CT:699267007;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;Gene:8090,MedGen:CN074265,OMIM:181430,Orphanet:ORPHA437572;MedGen:CN517202 Congenital myopathy with fiber type disproportion;Dilated cardiomyopathy 1S;Familial hypertrophic cardiomyopathy 1;Hypertrophic cardiomyopathy;Myopathy, distal, 1;Myopathy, myosin storage, autosomal recessive;Myosin storage myopathy;Primary familial hypertrophic cardiomyopathy;Scapuloperoneal myopathy, MYH7-related;not provided germline;unknown 14 23426834 GAAAATCTGAACAAGCTGATGACCAACTTGCGCTCCACCCATCCCCACTTTGTACGTTGTA 74315392 203782 NM_172107.3(KCNQ2):c.740C>T (p.Ser247Leu) KCNQ2 Oct 31, 2016 MedGen:CN517202 not provided germline 20 63442482 ACATCGGCTTCCTTTGTCTCATCCTGGCCTCGTTCCTGGTGTACTTGGCAGAGAAGGGGGA 363807 51563 NM_000138.4(FBN1):c.5863C>T (p.Gln1955Ter) FBN1 Jul 02, 2013 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:CN517202 Marfan syndrome;not provided germline 15 48445430 GGCCAATGCATTAATACAGTGGGGTCTTTCCAGTGCCAGTGCAATGAAGGCTATGAGGTGG 375785084 99274 NM_000709.3(BCKDHA):c.659C>T (p.Ala220Val) BCKDHA Aug 25, 2013 MedGen:C0024776,OMIM:248600,SNOMED CT:27718001 Maple syrup urine disease germline 19 41422176 CCCTCTCATCCCCTGCAGCGGTGGGGGCGGCGTACGCAGCCAAGCGGGCCAATGCCAACAG 387907130 40136 NM_024599.5(RHBDF2):c.566C>T (p.Pro189Leu) RHBDF2 Sep 01, 2012 MedGen:C1835664,OMIM:148500,Orphanet:ORPHA2198 Howel-Evans syndrome germline 17 76478999 ACCGCCCCCCTCCCTTCCAGATTGTGGATCCGCTGGCCCGGGGCCGGGCCTTCCGCCACCC 387907078 39946 NM_015338.5(ASXL1):c.2197C>T (p.Gln733Ter) ASXL1 Jun 26, 2011 MedGen:C0796232,OMIM:605039 C-like syndrome germline 20 32434909 TCTCTGAGAAAGGAGGAAAGCTGCCTACTACAGAGGGCTACAGTTGGACTCACAGATGGGC 761837416 474329 NM_005732.3(RAD50):c.3592C>T (p.Arg1198Ter) RAD50 Oct 19, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 5 132638197 ATGCTGAAGGGAGACACAGCCTTGGATATGCGAGGACGATGCAGTGCTGGACAAAAGGCAG 74315348 20408 NM_014625.3(NPHS2):c.871C>T (p.Arg291Trp) NPHS2 May 05, 2014 MedGen:C1868672,OMIM:600995,Orphanet:ORPHA656 Nephrotic syndrome, idiopathic, steroid-resistant germline;unknown 1 179552605 GAGGCTGAAGCGCAAAGACAAGCCAAAGTGCGGGTGAGCACTCCATCCTCCCACCCAGACT 121918344 20261 NM_019098.4(CNGB3):c.1304C>T (p.Ser435Phe) CNGB3 Mar 27, 2017 MedGen:C1849792,OMIM:262300 Achromatopsia 3 germline 8 86632768 TGAATTTTTTTTCTGGAGTTTTTGTGTTCTCCAGTTTAATTGGTCAGGTAAGCTGAGTATG 587784190 168264 NM_022455.4(NSD1):c.6349C>T (p.Arg2117Ter) NSD1 Feb 21, 2017 MedGen:C0004903,OMIM:130650,Orphanet:ORPHA116,SNOMED CT:81780002;MedGen:CN035106,OMIM:117550;MedGen:CN517202 Beckwith-Wiedemann syndrome;Sotos syndrome 1;not provided germline 5 177292044 CGCAGGACCCAGGGTGAAATCACAAAGGAGCGAGAAGATGAGTGTTTTAGTTGTGGGGATG 397507910 66973 NM_000059.3(BRCA2):c.7303C>T (p.Gln2435Ter) BRCA2 Oct 18, 2016 MedGen:C2675520,OMIM:612555 Breast-ovarian cancer, familial 2 germline 13 32355156 AATATTAACTTGGAGGAAAACAGACAAAAGCAAAACATTGATGGACATGGCTCTGATGATA 142150953 247572 NM_017947.3(MOCOS):c.1255C>T (p.Arg419Ter) MOCOS Jul 27, 2016 MedGen:C1863688,OMIM:603592,Orphanet:ORPHA93602 Xanthinuria type 2 germline 18 36213402 AAAATGGCCAGTCTTTACAACATCCACCTGCGAACTGGCTGCTTCTGTAACACTGGGGCCT 121908102 19305 NM_000784.3(CYP27A1):c.1016C>T (p.Thr339Met) CYP27A1 May 12, 2017 MedGen:C0238052,OMIM:213700,Orphanet:ORPHA909,SNOMED CT:63246000;MedGen:CN517202 Cholestanol storage disease;not provided germline 2 218813095 TGCCTGAGCTGCTCATGGCTGGAGTGGACACGGTGCGTGAAGGGGGAGGGTGAGACCAGGG 72653796 426932 NM_001171.5(ABCC6):c.2432C>T (p.Thr811Met) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16177610 CCTTCCCTGCCCAGACACGGATTCTCGTGACGCACGCACTCCACATCCTGCCCCAGGCTGA 878853036 237129 NM_001130144.2(LTBP3):c.3364C>T (p.Gln1122Ter) LTBP3 May 11, 2016 MedGen:CN517202 not provided germline 11 65540034 TGGGTGCCCGGGCCCTCCGGCCGCGATTGCCAGCTCCCCGAGAGCCCGGCCGGTGAGGGCG 875989799 227679 NM_001111125.2(IQSEC2):c.2366C>T (p.Ala789Val) IQSEC2 May 10, 2016 Gene:170530,MedGen:C2931498,OMIM:300551,OMIM:309530 Mental retardation, X-linked 1 germline X 53248814 GCTTCCTGTCAGACACACCGGTGGGAGTGGCTCACTTCATCCTGGAGCGGAAAGGCCTCAG 757011098 244031 NM_033116.5(NEK9):c.1489C>T (p.Arg497Ter) NEK9 Jul 07, 2016 MedGen:C4310760,OMIM:617022,Orphanet:ORPHA464366 Lethal congenital contracture syndrome 10 germline 14 75106541 TGTGGAGATAATCATGTGGTGGTTCTGACACGAAACAAGGAAGTCTATTCTTGGGGCTGTG 864321704 217254 NM_002052.4(GATA4):c.1263C>T (p.Ser421=) GATA4 Jul 02, 2015 MedGen:C0152021,SNOMED CT:13213009 Congenital heart disease unknown 8 11758409 GTCTCCCGTCAGCCAGTCTCCACAGACCAGCTCCAAGCAGGACTCTTGGAACAGCCTGGTC 1060503063 395605 NM_001277115.1(DNAH11):c.10789C>T (p.Gln3597Ter) DNAH11 Jan 13, 2017 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244 Ciliary dyskinesia germline 7 21842641 TTGGCAAATCCTCACTATAAGCCGGAATTACAAGCTCAGACAACTCTCCTCAATTTCACAG 121917709 28859 NM_000168.5(GLI3):c.1927C>T (p.Arg643Ter) GLI3 Sep 01, 1999 MedGen:C4016298 Postaxial polydactyly, type a1/b germline 7 41972513 GGCCCAGAGGCTCATGTCACCAAGAAGCAGCGAGGGGACATCCATCCTCGGCCGCCACCCC 776838028 361172 NM_004328.4(BCS1L):c.598C>T (p.Arg200Ter) BCS1L Jun 02, 2017 MedGen:C1852372,OMIM:124000;MedGen:CN517202 Mitochondrial complex III deficiency;not provided germline;paternal 2 218661896 TCTGTGGTTCTACAACAGGGTCTGGCTGACCGAATTGTCAGAGACGTCCAGGAATTCATCG 796053355 202290 NM_003165.3(STXBP1):c.568C>T (p.Arg190Trp) STXBP1 May 31, 2017 MedGen:C0393706,Orphanet:ORPHA1934;MedGen:C2677326,OMIM:612164;MedGen:CN517202 Early infantile epileptic encephalopathy;Early infantile epileptic encephalopathy 4;not provided germline 9 127663343 TGTGCCACCCTGAAGGAGTACCCGGCTGTGCGGTATCGGGGGTAAGGCAGTGCACCAGTCT 104894194 19925 NM_003977.3(AIP):c.40C>T (p.Gln14Ter) AIP Sep 26, 2017 MedGen:C1863340,Orphanet:ORPHA314777;MedGen:C0346302,OMIM:102200,Orphanet:ORPHA96256,SNOMED CT:254957009 Pituitary adenoma predisposition;Somatotroph adenoma germline 11 67483198 ATCATCGCAAGACTCCGGGAGGACGGGATCCAAAAACGTGTGATACAGGAAGGCCGAGGAG 121434546 32655 NM_000070.2(CAPN3):c.257C>T (p.Ser86Phe) CAPN3 May 01, 1997 MedGen:C1869123,OMIM:253600,Orphanet:ORPHA267 Limb-girdle muscular dystrophy, type 2A germline 15 42360062 TGGACCCTGAGTTCCCACCGGATGAGACCTCTCTCTTTTATAGCCAGAAGTTCCCCATCCA 386834061 71274 NM_017890.4(VPS13B):c.11314C>T (p.Gln3772Ter) VPS13B Nov 07, 2014 MedGen:C0265223,OMIM:216550,Orphanet:ORPHA193,SNOMED CT:56604005;Human Phenotype Ontology:HP:0001249,MedGen:C1843367;Human Phenotype Ontology:HP:0000252,MedGen:C0424688;Human Phenotype Ontology:HP:0001875,MedGen:C0853697;Human Phenotype Ontology:HP:0000529,MedGen:C3277697;Human Phenotype Ontology:HP:0011107,MedGen:C2937365;Human Phenotype Ontology:HP:0000556,MedGen:C0854723,Orphanet:ORPHA71862,SNOMED CT:314407005;Human Phenotype Ontology:HP:0001773,MedGen:C1848673;Human Phenotype Ontology:HP:0004322,MedGen:C0349588;Human Phenotype Ontology:HP:0200055,MedGen:C0575802 Cohen syndrome;Intellectual disability;Microcephaly;Neutropenia;Progressive visual loss;Recurrent aphthous stomatitis;Retinal dystrophy;Short foot;Short stature;Small hand unknown 8 99868312 ATTCCAGGTGCAATTGCTGGTATAGTTGATCAGCCGATGCAGAACTTCCAGAAAACATCTG 80356669 33969 NM_000207.2(INS):c.265C>T (p.Arg89Cys) INS Mar 04, 2015 MedGen:C1833104,OMIM:606176,Orphanet:ORPHA99885 Permanent neonatal diabetes mellitus germline 11 2159920 CCCTTGGCCCTGGAGGGGTCCCTGCAGAAGCGTGGCATTGTGGAACAATGCTGTACCAGCA 137852227 25611 NM_000133.3(F9):c.223C>T (p.Arg75Ter) F9 Jun 05, 2014 MedGen:C0008533,OMIM:306900,Orphanet:ORPHA98879,SNOMED CT:41788008 Hereditary factor IX deficiency disease germline X 139537144 ATGGAAGAAAAGTGTAGTTTTGAAGAAGCACGAGAAGTTTTTGAAAACACTGAAAGAACAG 786204928 187346 NM_000314.6(PTEN):c.289C>T (p.Gln97Ter) PTEN Aug 09, 2016 MedGen:CN517202 not provided germline 10 87933048 CAATATCCTTTTGAAGACCATAACCCACCACAGCTAGAACTTATCAAACCCTTTTGTGAAG 886041132 265116 NM_000044.4(AR):c.2566C>T (p.Arg856Cys) AR Sep 22, 2015 MedGen:C0039585,OMIM:300068,SNOMED CT:12313004;MedGen:CN517202 Androgen resistance syndrome;not provided germline X 67722943 AAAAGAAAAAATCCCACATCCTGCTCAAGACGCTTCTACCAGCTCACCAAGCTCCTGGACT -1 471000 NM_000166.5(GJB1):c.515C>T (p.Pro172Leu) GJB1 Apr 24, 2017 MedGen:CN118851 Charcot-Marie-Tooth Neuropathy X germline X 71224222 TGGTGCGGCTGGTCAAGTGCGACGTCTACCCCTGCCCCAACACAGTGGACTGCTTCGTGTC 137853098 22691 NM_000538.3(RFXAP):c.163C>T (p.Gln55Ter) RFXAP Sep 11, 1997 MedGen:C1859537 Bare Lymphocyte Syndrome, Type II, Complementation Group D germline 13 36819520 ACCCTGCTAGTGATGCAACCCTGTGCTGGGCAGGACGAGGCTGCGGCCCCCGGGGGCAGCG 771007945 478431 NM_002878.3(RAD51D):c.655C>T (p.Gln219Ter) RAD51D Dec 12, 2016 MedGen:C3280345,OMIM:614291;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 4;Hereditary cancer-predisposing syndrome germline;unknown 17 35103466 ACTGCGGTGGTTTCCCCACTTCTGGGAGGTCAGCAGAGGGAAGGTGAGTGATGTGGCAGAG 879254835 246050 NM_000527.4(LDLR):c.1211C>T (p.Thr404Ile) LDLR Mar 25, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline;not applicable 19 11113302 CCCCAGGCTCCATCGCCTACCTCTTCTTCACCAACCGGCACGAGGTCAGGAAGATGACGCT 863225163 214222 NM_023073.3(CPLANE1):c.2353C>T (p.Arg785Ter) CPLANE1 May 31, 2016 MedGen:C3553264,OMIM:614615;MedGen:CN517202 Joubert syndrome 17;not provided germline;unknown 5 37224679 AAAACTTTATGGTATCAAGCACAATTAAATCGAAGAGTTCCTGAAGCTGATAGTCAGTTAA 121434512 16932 NM_015488.4(PNKD):c.20C>T (p.Ala7Val) PNKD Apr 01, 2005 MedGen:C1869117,OMIM:118800,Orphanet:ORPHA98810,SNOMED CT:49949003 Paroxysmal choreoathetosis germline 2 218270555 GGGATCTGAACATGGCGGCGGTGGTAGCTGCTACGGCGCTGAAGGGCCGGGGGGCGAGAAA 121918269 17189 NM_133433.3(NIPBL):c.4606C>T (p.Arg1536Ter) NIPBL Feb 08, 2013 MedGen:CN029798,OMIM:122470 Cornelia de Lange syndrome 1 germline 5 37014728 GTCATTACTAACTCTTATGAAACAGCTATGCGAACAGCCCAAAACTTCCTCTCCATCTTCC 548681312 264195 NM_147127.4(EVC2):c.2476C>T (p.Arg826Ter) EVC2 Mar 10, 2016 MedGen:CN517202 not provided germline 4 5622562 GAGGCCGTGACAGAGGAGCAGGCAGAGCTGCGACGCTGGGAGCACCTGATCTTCATGTGAG 137852218 25741 NM_203473.2(PORCN):c.370C>T (p.Arg124Ter) PORCN Jul 01, 2007 MedGen:C0016395,OMIM:305600,Orphanet:ORPHA2092 Focal dermal hypoplasia germline X 48511932 ATGGTAGACACCGTGACATGGCACAAGATGCGAGGTAGGTAGCCCTGCCCCTCTCACCTGC 148812376 190113 NM_001009944.2(PKD1):c.9829C>T (p.Arg3277Cys) PKD1 Jun 07, 2017 MedGen:C0085413,OMIM:173900,SNOMED CT:28728008;MedGen:CN517202 Polycystic kidney disease, adult type;not provided germline 16 2099955 TGGGACCGGCCGCCTCGTAGCCGTTTCACTCGCATCCAGAGGGCCACCTGCTGCGTTCTCC 375851208 236863 NM_004526.3(MCM2):c.130C>T (p.Arg44Cys) MCM2 May 31, 2016 MedGen:C4310775,OMIM:616968 Deafness, autosomal dominant 70 germline 3 127599441 CGTACTGATGCCCTCACCTCCAGCCCTGGCCGTGACCTTCCACCATTTGAGGATGAGTCCG 17852079 94484 NM_000311.4(PRNP):c.679C>T (p.Gln227Ter) PRNP Feb 01, 2010 MedGen:C0017495,OMIM:137440,Orphanet:ORPHA356,SNOMED CT:67155006 Gerstmann-Straussler-Scheinker syndrome germline 20 4699899 CAGTACGAGAGGGAATCTCAGGCCTATTACCAGAGAGGATCGAGCATGGTCCTCTTCTCCT 772821016 212837 NM_000051.3(ATM):c.748C>T (p.Arg250Ter) ATM Oct 27, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Ataxia-telangiectasia syndrome;Hereditary cancer-predisposing syndrome;not provided germline;unknown 11 108244873 CTCAAGACTTTGGCTGTCAACTTTCGAATTCGAGTGTGTGAATTAGGAGATGAAATTCTTC 121918001 28702 NM_000478.5(ALPL):c.211C>T (p.Arg71Cys) ALPL Oct 15, 1992 Human Phenotype Ontology:HP:0003239,MedGen:C0268412,OMIM:241500,Orphanet:ORPHA247651,SNOMED CT:55236002 Infantile hypophosphatasia germline 1 21561126 GGGATGGGTGTCTCCACAGTGACGGCTGCCCGCATCCTCAAGGGTCAGCTCCACCACAACC 797044462 39835 NM_020223.3(FAM20C):c.982C>T (p.Pro328Ser) FAM20C Aug 01, 2011 MedGen:C1850106,OMIM:259775,Orphanet:ORPHA1832 Raine syndrome germline 7 248340 GCCAGGATCCTGGACTTCCGCCGGGTCCCTCCCGTGGCCGGCAGGATGGTCAACATGACCA 201366610 26261 NM_004006.2(DMD):c.2302C>T (p.Arg768Ter) DMD Mar 01, 1993 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Duchenne muscular dystrophy germline X 32501833 ATCTTTGCTCTCATGCTGCAGGCCATAGAGCGAGAAAAAGCTGAGAAGTTCAGAAAACTGC 1057516208 354170 NM_004523.3(KIF11):c.2341C>T (p.Gln781Ter) KIF11 - MedGen:C1835265,OMIM:152950,Orphanet:ORPHA2526 Microcephaly with or without chorioretinopathy, lymphedema, or mental retardation germline 10 92645436 AAATTTTGTGCTGATTCTGATGGCTTCTCACAGGAACTCAGAAATTTTAACCAAGAAGGTA 121908858 21512 NM_003759.3(SLC4A4):c.85C>T (p.Gln29Ter) SLC4A4 Apr 01, 2001 MedGen:C1970309,OMIM:604278,Orphanet:ORPHA93607 Renal tubular acidosis, proximal, with ocular abnormalities and mental retardation germline 4 71339333 GCCCGGAGCTCCACTTTCCTCAGGGTTGTCCAGCCAATGTTTAACCACAGTATTTTCACTT 398124144 100943 NM_004380.2(CREBBP):c.3337C>T (p.Gln1113Ter) CREBBP Mar 18, 2013 MedGen:CN517202 not provided germline 16 3758886 CGACAGGACCCAGAGTCATTACCTTTCCGGCAGCCTGTAGATCCCCAGCTCCTCGGAATTC 727504299 179623 NM_000257.3(MYH7):c.2191C>T (p.Pro731Ser) MYH7 May 11, 2012 MedGen:C3495498,OMIM:192600;MedGen:CN517202 Familial hypertrophic cardiomyopathy 1;not provided germline 14 23425790 AGGTATCGCATCCTGAACCCAGCGGCCATCCCTGAGGGACAGTTCATTGATAGCAGGAAGG 121434500 23515 NM_003098.2(SNTA1):c.1169C>T (p.Ala390Val) SNTA1 Mar 14, 2016 MedGen:C2751830,OMIM:612955;MedGen:CN517202 Long QT syndrome 12;not provided germline 20 33410203 TGTTCAGCGTGGAGTCACCGCAGGAGCTGGCTGCCTGGACCCGCCAGCTTGTGGATGGCTG 189150283 274206 NM_006767.3(LZTR1):c.1084C>T (p.Arg362Ter) LZTR1 Aug 03, 2016 MedGen:C3810283,OMIM:615670 Schwannomatosis 2 germline 22 20992304 TATGAGGAGCGGGTTGGCTTCAAGAAGTCCCGAGATGTGTTTGGCCTGGACTTTGGCACCA 199422187 34475 NM_018136.4(ASPM):c.9319C>T (p.Arg3107Ter) ASPM Sep 01, 2009 MedGen:C1837501,OMIM:608716 Primary autosomal recessive microcephaly 5 not provided 1 197092032 CTTTAGTTTTTAGAACAGAGAGCCAAAATTCGACTTCTTCACTTCACTGCAGCTGCATATT 863225243 214406 NM_005219.4(DIAPH1):c.3145C>T (p.Arg1049Ter) DIAPH1 May 03, 2016 MedGen:C4225261,OMIM:616632,Orphanet:ORPHA477814;MedGen:CN517202 Seizures, cortical blindness, and microcephaly syndrome;not provided germline 5 141528456 GACGAGCTTGCCCATGTGGAGAAAGCCAGCCGAGGTGGGGCAGTTTGGAATGAAGCTAGAG 80358538 66033 NM_000059.3(BRCA2):c.2881C>T (p.Gln961Ter) BRCA2 Jan 03, 2017 MedGen:C2675520,OMIM:612555 Breast-ovarian cancer, familial 2 germline;unknown 13 32337236 CTTGCAGAGGAGAACAAAAATAGTGTAAAGCAGCATATAAAAATGACTCTAGGTCAAGATT 555349004 424952 NM_173543.2(DZIP1L):c.269C>T (p.Ala90Val) DZIP1L Aug 07, 2017 MedGen:CN381221,OMIM:617610 POLYCYSTIC KIDNEY DISEASE 5 germline 3 138103703 ACCCGGCACTGCTCAAGGTGCTGCGCCTGGCGCAGCTCATCATTGAGTACCTGCTGCACTG 754616030 264000 NM_000081.3(LYST):c.10345C>T (p.Arg3449Ter) LYST Jun 29, 2016 MedGen:CN517202 not provided germline 1 235702776 TTGCTAGTGCAGTTTGCTTTCAGGGAGACCCGAGAACAGGTCAAAGAAATCACCTATCCGG 727504181 177187 NM_001043353.1(TPM3):c.436C>T (p.Arg146Ter) TPM3 Feb 03, 2014 MedGen:CN517202 not provided germline 1 154172927 ATTGAAGGAGACTTGGAACGCACAGAGGAACGAGCTGAGCTGGCAGAGTCGTGAGTATCTA 80357010 45971 NM_007294.3(BRCA1):c.1480C>T (p.Gln494Ter) BRCA1 Jan 11, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome germline;unknown 17 43094051 GGAGCATTTGTTACTGAGCCACAGATAATACAAGAGCGTCCCCTCACAAATAAATTAAAGC 1060499563 384628 NM_007129.4(ZIC2):c.793C>T (p.Gln265Ter) ZIC2 - MedGen:C1864827,OMIM:609637 Holoprosencephaly 5 de novo 13 99982857 GAGCTAATCTGCAAGTGGATCGACCCCGAGCAACTGAGCAATCCCAAGAAGAGCTGCAACA 28937597 20873 NM_006790.2(MYOT):c.170C>T (p.Thr57Ile) MYOT Jul 28, 2016 MedGen:C1834659,OMIM:159000,Orphanet:ORPHA266;MedGen:CN517202 Limb-girdle muscular dystrophy, type 1A;not provided germline 5 137870821 GTACAGAGCAAAGATTTTCTGCCTCCTCAACACTGAGCTCTCACATCACCATGTCCTCCTC 367543063 40179 NM_023073.3(CPLANE1):c.4804C>T (p.Arg1602Ter) CPLANE1 Apr 06, 2012 MedGen:C3553264,OMIM:614615 Joubert syndrome 17 germline 5 37183377 TTACTTTTTGATGTACATACAACATTAAAACGACATCAGAGCAAAACTAAAAGCCAGAATG 397514405 36401 NM_000060.4(BTD):c.1211C>T (p.Thr404Ile) BTD Dec 04, 2012 MedGen:C0220754,OMIM:253260,Orphanet:ORPHA79241,SNOMED CT:8808004 Biotinidase deficiency not provided 3 15645067 TTCACTCTGAGATGATGTATGACAATTTCACCCTGGTCCCTGTCTGGGGAAAGGAAGGCTA 886041503 264587 NM_015335.4(MED13L):c.1336C>T (p.Gln446Ter) MED13L Jan 28, 2016 MedGen:CN517202 not provided germline 12 116009077 GTCGGGCCCAATCGACCTCCCACAGTATCTCAACCAGGGTTCAGTGCAGGACCATCATCAT 137854493 26618 NM_002547.2(OPHN1):c.184C>T (p.Gln62Ter) OPHN1 Jun 01, 2003 MedGen:C1845366,OMIM:300486,Orphanet:ORPHA137831 Mental retardation X-linked with cerebellar hypoplasia and distinctive facial appearance germline X 68299067 GATTATTCTTCTGCTGTTCAGAAATTTTCCCAGACGCTGCAGTCATTTCAGTTTGATTTCA 376576925 401712 NM_000267.3(NF1):c.3916C>T (p.Arg1306Ter) NF1 Apr 10, 2017 MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003;MedGen:CN517202 Neurofibromatosis, type 1;not provided germline 17 31235963 TATCTACAAAAACTCCTGGATCCTTTATTACGAATTGTGATCACATCCTCTGATTGGCAAC 1114167442 417868 NM_002816.4(PSMD12):c.367C>T (p.Arg123Ter) PSMD12 Jun 08, 2017 MedGen:CN249119,OMIM:617516 Stankiewicz-Isidor syndrome germline 17 67350267 GAGGAAATCACAGACCTTCCTATCAAACTTCGATTAATTGATACTCTACGAATGGTTACCG 183208638 226421 NM_033419.4(PGAP3):c.*559C>T PGAP3 Mar 01, 2016 MedGen:C3810354,OMIM:615716 Hyperphosphatasia with mental retardation syndrome 4 germline 17 39672244 GCTGGGATTGGGAAGGAGTTTCACCCTGACCATTGCCCTAGCCAGGTTCCCAGGAGGCCTC 121912288 26626 NM_001363.4(DKC1):c.1058C>T (p.Ala353Val) DKC1 Jul 31, 2016 MedGen:C0265965,Orphanet:ORPHA1775,SNOMED CT:74911008;MedGen:C1148551,OMIM:305000 Dyskeratosis congenita;Dyskeratosis congenita X-linked germline X 154773152 TGCCTGTAGCTATTGCATTAATGACCACAGCGGTCATCTCTACCTGCGACCATGGTATAGT 137853049 22115 NM_006009.3(TUBA1A):c.1264C>T (p.Arg422Cys) TUBA1A Aug 03, 2017 MedGen:C1969029,OMIM:611603,Orphanet:ORPHA102011;MedGen:CN517202 Lissencephaly 3;not provided germline 12 49185102 GGGATGGAGGAAGGTGAGTTTTCAGAGGCCCGTGAGGACATGGCTGCCCTTGAGAAGGATT 121908839 21571 NM_003722.4(TP63):c.955C>T (p.Arg319Cys) TP63 Jul 01, 2000 MedGen:C1854442,OMIM:605289 Split-hand/foot malformation 4 germline 3 189867905 AACAGCAGTTGTGTTGGAGGGATGAACCGCCGTCCAATTTTAATCATTGTTACTCTGGAAA 773711154 394759 NM_001369.2(DNAH5):c.5983C>T (p.Arg1995Ter) DNAH5 Aug 12, 2017 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244 Ciliary dyskinesia germline 5 13830675 GGCAAAACAGAAACCACTAAAGACATGGGACGATGCCTCGGGAAATACGTCGTGGTTTTCA 1057517779 359757 NM_004959.4(NR5A1):c.937C>T (p.Arg313Cys) NR5A1 Nov 11, 2015 MedGen:C2751824,OMIM:612965,Orphanet:ORPHA98085;MedGen:CN517202 46,XY sex reversal, type 3;not provided germline 9 124493083 AGCGAGCTGCTGGTGTTCGACCACATCTACCGCCAGGTCCAGCACGGCAAGGAGGGCAGCA 587783272 167727 NM_018136.4(ASPM):c.7825C>T (p.Gln2609Ter) ASPM Feb 08, 2013 MedGen:C1837501,OMIM:608716 Primary autosomal recessive microcephaly 5 germline 1 197101426 CACAATGAACTTAAGAAAGAGACTTGTGTTCAGGCAGGTTTTCAGGACATGAACATAAAAA 397507171 36327 NM_000060.4(BTD):c.245C>T (p.Ala82Val) BTD Dec 04, 2012 MedGen:C0220754,OMIM:253260,Orphanet:ORPHA79241,SNOMED CT:8808004 Biotinidase deficiency not provided 3 15635624 ACCCTCTGGCTCTCATCAGCCGCCAAGAGGCCTTGGAGCTCATGAACCAGAACCTTGACAT 794728382 197230 NM_000238.3(KCNH2):c.2104C>T (p.Gln702Ter) KCNH2 Aug 19, 2012 MedGen:CN517202 not provided germline 7 150950962 CCCCTGCGCCAGCGCCTCGAGGAGTACTTCCAGCACGCCTGGTCCTACACCAACGGCATCG 146278035 169276 NM_005682.6(ADGRG1):c.286C>T (p.Arg96Ter) ADGRG1 Feb 08, 2013 MedGen:C1847352,OMIM:606854,Orphanet:ORPHA101070 Polymicrogyria, bilateral frontoparietal germline 16 57651421 GGCCTCTACCACTTCTGCCTCTACTGGAACCGACATGCTGGGAGATTACATCTTCTCTATG 137852604 24576 NM_130439.3(MXI1):c.362C>T (p.Ala121Val) MXI1 Jul 01, 1999 Human Phenotype Ontology:HP:0100697,MedGen:C0206729 Neurofibrosarcoma germline 10 110228276 ATTCAAAGCCCCCACGGAGGTTGAGCCGGGCACAGAAACACAGCAGCGGGAGCAGCAACAC 768366199 464458 NM_015346.3(ZFYVE26):c.4936C>T (p.Arg1646Ter) ZFYVE26 Jun 27, 2017 MedGen:C0037772 Spastic paraplegia germline 14 67777597 ACCCACTTCTATGGACAACTGACTGCTGTCCGACACCGTGAAATCCAGGCGCTGTATGTGG 1060502639 404245 NM_004006.2(DMD):c.2665C>T (p.Arg889Ter) DMD Oct 01, 2016 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Duchenne muscular dystrophy germline X 32485057 CGGCTATCAGATCTTCAACCTCAAATTGAACGATTAAAAATTCAAAGCATAGCCCTGAAAG 111033845 36594 NM_000155.3(GALT):c.770C>T (p.Pro257Leu) GALT Dec 04, 2012 MedGen:C0268151,OMIM:230400,Orphanet:ORPHA79239,SNOMED CT:124354006 Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase not provided 9 34648844 CAACATGGCCCTACCAGACACTGCTGCTGCCCCGTCGGCATGTGCGGCGGCTACCTGAGCT 121908894 21439 NM_001457.3(FLNB):c.518C>T (p.Ala173Val) FLNB Apr 01, 2004 MedGen:C0265283,OMIM:108720,Orphanet:ORPHA1190 Atelosteogenesis type 1 germline 3 58077271 AGAACTGGCAAGACGGCAAAGCCCTGGGAGCCCTGGTAGACAGCTGTGCTCCAGGTAAGTG 267606867 22381 NM_005144.4(HR):c.-315C>T HR Feb 01, 2009 Gene:50823,MedGen:C2750815,OMIM:146550 Hypotrichosis 4 germline 8 22130702 CGCAGCACGGAGTCTCGGCGTCCCATGGCGCAACCTACGGCCTCGGCCCAGAAGCTGGTGC -1 426743 NM_183075.2(CYP2U1):c.943C>T (p.Gln315Ter) CYP2U1 Jun 07, 2017 MedGen:C3539507,OMIM:615030,Orphanet:ORPHA320411 Spastic paraplegia 56, autosomal recessive maternal 4 107945422 CATCAAGAGTCTCTGGATAGAGAGAACCCTCAGGACTTCATAGACATGTACCTTCTCCACA 1060501408 396851 NM_000118.3(ENG):c.-127C>T ENG Jul 25, 2017 MedGen:C0039445,OMIM:187300,Orphanet:ORPHA774,SNOMED CT:21877004 Osler hemorrhagic telangiectasia syndrome germline 9 127854482 GGCCGCCACCCCAGAAGGCTGGAGCAGGGACGCCGTCGCTCCGGCCGCCTGCTCCCCTCGG 774159791 487201 NM_000255.3(MUT):c.1399C>T (p.Arg467Ter) MUT Apr 11, 2016 Human Phenotype Ontology:HP:0002912,MedGen:C0268583,SNOMED CT:42393006 Methylmalonic acidemia germline 6 49448861 AAAGCTGTAGCTGAGGGAATACCTAAACTTCGAATTGAAGAATGTGCTGCCCGAAGACAAG 786200944 75294 NM_004249.3(RAB28):c.565C>T (p.Gln189Ter) RAB28 Jul 11, 2013 MedGen:C3809299,OMIM:615374 Cone-rod dystrophy 18 germline 4 13376553 GGGATCAAATTAAACAAAGCAGAAATAGAACAGTCACAGGTGATTACCTTGAACTTTATAT 41511344 23596 NM_000901.4(NR3C2):c.2429C>T (p.Ser810Leu) NR3C2 Jul 07, 2000 MedGen:C4016708 Hypertension, early-onset, autosomal dominant, with exacerbation in pregnancy germline 4 148152550 CCCTAATCCAGTATTCTTGGATGTGTCTATCATCATTTGCCTTGAGCTGGAGATCGTACAA 758827458 444192 NM_014251.2(SLC25A13):c.1063C>T (p.Arg355Ter) SLC25A13 Jul 27, 2017 MedGen:CN517202 not provided germline 7 96184391 GCTGTGTATCCTATCGATCTTGTAAAAACTCGAATGCAGAACCAACGATCAACTGGCTCTT 397514717 75080 NM_080605.3(B3GALT6):c.694C>T (p.Arg232Cys) B3GALT6 Jun 06, 2013 MedGen:C0432243,OMIM:271640,Orphanet:ORPHA93359,SNOMED CT:254100000 Spondyloepimetaphyseal dysplasia with joint laxity germline 1 1232972 GCCGACCTGGTGCACTACCTGCGCCTCAGCCGCGACTACCTGCGCGCCTGGCACAGCGAGG 1131692169 424017 NM_006739.3(MCM5):c.1397C>T (p.Thr466Ile) MCM5 Jul 10, 2017 MedGen:CN314201,OMIM:617564 MEIER-GORLIN SYNDROME 8 germline 22 35416388 TGGCAATCCACGAAGCCATGGAGCAGCAGACCATCTCTATCGCCAAGGTGAGTGGCCCTCC 121909208 22905 NM_000358.2(TGFBI):c.1663C>T (p.Arg555Trp) TGFBI Aug 01, 1998 MedGen:C1641846,OMIM:121900,Orphanet:ORPHA98962,SNOMED CT:419039007 Groenouw corneal dystrophy type I germline 5 136056780 GAAGCCTTCCGAGCCCTGCCACCAAGAGAACGGAGCAGACTCTTGGGTAAAGACCAACTTA 431905509 51364 NM_005984.4(SLC25A1):c.844C>T (p.Arg282Cys) SLC25A1 Apr 04, 2013 MedGen:C2746066,OMIM:615182,Orphanet:ORPHA19 Combined d-2- and l-2-hydroxyglutaric aciduria germline 22 19176222 CCACCCAGATTCTACAAGGGCACTGTCCCCCGCCTGGGCCGGGTCTGCCTGGATGTGGCCA 397514783 75641 NM_000368.4(TSC1):c.2272C>T (p.Gln758Ter) TSC1 Jan 06, 2017 MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000;MedGen:CN517202 Tuberous sclerosis syndrome;not provided germline 9 132902724 CAGATGTGGAAGGTTAGTCTGCAGAAAGAACAAGCTAGATACAATCAGCTCCAGGAGCAGC 201855602 273547 NM_000350.2(ABCA4):c.3056C>T (p.Thr1019Met) ABCA4 Oct 17, 2016 MeSH:C535804,MedGen:C1855465,OMIM:248200;MedGen:CN517202 Stargardt disease 1;not provided germline 1 94043470 TTTTCTCGTTGTCCCATCCTCCTAGCCTCACGGTGGCTGAGCACATGCTGTTCTATGCCCA 141153181 214213 NM_023073.3(CPLANE1):c.3599C>T (p.Ala1200Val) CPLANE1 Jul 03, 2017 MedGen:C3553264,OMIM:614615;MedGen:CN517202 Joubert syndrome 17;not provided germline;unknown 5 37198775 TCCTTCAGCGTGTTCTCCTGCTTTTCCGGGCGGCTCAGTGTTCTTTTCCTGTAGCACAGTG 757725348 244887 NM_001376.4(DYNC1H1):c.10420C>T (p.Arg3474Trp) DYNC1H1 Feb 09, 2016 MedGen:CN517202 not provided germline 14 102033982 CATCTTGTTCGGTTTTCCTTTTAGGTAAACCGGAGCACTGCTCTTCTGAAGAGCTTGTCTG 200335504 486675 NM_014055.3(IFT81):c.1534C>T (p.Arg512Ter) IFT81 Feb 28, 2018 na SHORT-RIB THORACIC DYSPLASIA 19 WITHOUT POLYDACTYLY germline 12 110192683 TCAGCTCTTGCCTCAGTTATAAAAGAGCTACGACAGTTGCGTCAAAAATATCAAGTAAGTT 587783729 168933 NM_003482.3(KMT2D):c.8743C>T (p.Arg2915Ter) KMT2D Feb 04, 2015 MedGen:CN030661,OMIM:147920 Kabuki syndrome 1 germline;unknown 12 49038613 CGTTTTTACCCTGTAAGTGAGGACCCCCACCGACTGGCTCCTGAAGGGCTTCGGGGCCTGG 752175052 375915 NM_020366.3(RPGRIP1):c.3565C>T (p.Arg1189Ter) RPGRIP1 Jan 09, 2017 MedGen:CN517202 not provided germline 14 21345145 ATAGACCTGGACCCACAGGAGCAGCAAGGCCGAAGGCGGTTTCTGTTCGACATGCTGAATG 794727688 194747 NM_003482.3(KMT2D):c.15535C>T (p.Arg5179Cys) KMT2D Oct 31, 2016 MedGen:CN030661,OMIM:147920;MedGen:CN517202 Kabuki syndrome 1;not provided germline 12 49026431 ATTCAGCGGGGAGAACGGCTGCACATGTTCCGTGTGGGGGGCCTTGTGTTCCACGCCATCG 786203251 181605 NM_003000.2(SDHB):c.724C>T (p.Arg242Cys) SDHB Dec 01, 2016 Human Phenotype Ontology:HP:0100723,MeSH:D046152,MedGen:C0238198,OMIM:606764,Orphanet:ORPHA44890;MedGen:C0027672,SNOMED CT:699346009;MedGen:C1861848,OMIM:115310;Human Phenotype Ontology:HP:0002666,MedGen:C0031511,OMIM:171300 Gastrointestinal stroma tumor;Hereditary cancer-predisposing syndrome;Paragangliomas 4;Pheochromocytoma germline 1 17022649 GCCAAGCTGCAGGACCCATTCTCTCTATACCGCTGCCACACCATCATGAACTGCACAAGGA 397514628 48506 NM_001291415.1(KDM6A):c.1711C>T (p.Arg571Ter) KDM6A Feb 15, 2013 MedGen:C3275495,OMIM:300867 Kabuki syndrome 2 germline X 45063449 CAGATGAGACCAACAGGAGTTGCACAGGTACGATCTACTGGAATTCCTAATGGGCCAACAG 121918380 28225 NM_002906.3(RDX):c.463C>T (p.Gln155Ter) RDX May 01, 2007 MedGen:C1970239,OMIM:611022 Deafness, autosomal recessive 24 germline 11 110263964 GGCTACCTGGCTAATGATAGACTCCTACCCCAGCGGTAAGTGAAACATGCGTTTGCATTAT 398123861 100368 NM_004006.2(DMD):c.1465C>T (p.Gln489Ter) DMD Aug 09, 2013 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009;MedGen:C3668940,OMIM:302045;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Becker muscular dystrophy;Dilated cardiomyopathy 3B;Duchenne muscular dystrophy germline X 32614320 CTTGGACCTGATCTTGAAGACCTAAAACGCCAAGTACAACAACATAAGGTAGGTGTATCTT 61752871 28154 NM_000329.2(RPE65):c.271C>T (p.Arg91Trp) RPE65 Apr 18, 2017 MedGen:C1859844,OMIM:204100;MedGen:C3151086,OMIM:613794;MedGen:C3151086,OMIM:613794;MedGen:CN517202 Leber congenital amaurosis 2;Retinitis pigmentosa 20;Retinitis pigmentosa 20;not provided germline 1 68444858 TTCAGGTTCATCCGCACTGATGCTTACGTACGGGCAATGACTGAGAAAAGGATCGTCATAA 794729132 198450 NM_004572.3(PKP2):c.397C>T (p.Gln133Ter) PKP2 Nov 30, 2011 MedGen:CN517202 not provided germline 12 32878483 TGGGGAAGAGGAACAGCACAGTACAGCTCCCAGAAGTCCGTGGAAGAAAGGTCCTTGAGGC 755007671 244076 NM_003014.3(SFRP4):c.694C>T SFRP4 Oct 03, 2017 Human Phenotype Ontology:HP:0100255,MedGen:C0265294,OMIM:265900,Orphanet:ORPHA3005,SNOMED CT:27837003 Pyle metaphyseal dysplasia germline 7 37912216 GAGATCTTCAAGTCCTCATCACCCATCCCTCGAACTCAAGTCCCGCTCATTACAAATTCTT 397514621 48446 NM_001410.2(MEGF8):c.1342C>T (p.Arg448Ter) MEGF8 Dec 10, 2012 MedGen:C3554247,OMIM:614976 Carpenter syndrome 2 germline 19 42336904 GGGCGGGATGGGCTTCAGGGCCCAAGGGAGCGAGCCTTCCACACAGCCAGTGTTCTGGGCA 587783692 168912 NM_003482.3(KMT2D):c.13606C>T (p.Arg4536Ter) KMT2D Jul 27, 2017 MedGen:C0796004,Orphanet:ORPHA2322,SNOMED CT:313426007;MedGen:CN030661,OMIM:147920 Kabuki syndrome;Kabuki syndrome 1 germline 12 49030958 CAGAAGGCAAGCGACAGGTTGGTGAGCTCCCGAAAGAAGCTGCGGAAGGAGGACGGGGTCA 121908982 21959 NM_003550.2(MAD1L1):c.175C>T (p.Arg59Cys) MAD1L1 May 31, 2001 MedGen:C4015779 Prostate cancer, somatic somatic 7 2225526 GCTCAGCTGGAGGAAAGAGCAGAGCAGATCCGTTCGAAGTCCCACCTCATCCAGGTGGAGC 387906830 39199 NM_003384.2(VRK1):c.397C>T (p.Arg133Cys) VRK1 Sep 21, 2011 Gene:100852400,MedGen:C1843504,OMIM:607596 Pontocerebellar hypoplasia type 1A germline 14 96852853 GTCTTCAGTTACAGGTTTATGATAATGGATCGCTTTGGGAGTGACCTTCAGAAAATATATG 749125777 426918 NM_001171.5(ABCC6):c.2784C>T (p.Gly928=) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16173287 GCCAGCAGGAAAGGACAGCATCCAATACGGCAGGGTAACCACCAGCTTCACCCACCCCTCC 1057517938 359696 NM_000445.4(PLEC):c.7612C>T (p.Gln2538Ter) PLEC Oct 24, 2016 MedGen:CN517202 not provided germline 8 143922290 AGCCTGCTACAGCGGGAGCGCTTCATCGAGCAGGAGAAGGCCAAGCTGGAGCAGCTCTTCC 1057517786 359498 NM_145860.1(PDCD10):c.103C>T (p.Arg35Ter) PDCD10 Apr 02, 2015 MedGen:CN517202 not provided germline 3 167704889 AATAATTTAAAATTTTTATTGCAGCTAGAACGAGTAAATCTGTCTGCAGCCCAGACACTGA 587777659 153788 NM_001288767.1(ARMC5):c.2977C>T (p.Arg993Trp) ARMC5 Jun 01, 2014 MedGen:C4014803,OMIM:615954 Acth-independent macronodular adrenal hyperplasia 2 germline 16 31466773 ACACTGGGGTCAGAGCAGTGCCCGAGGAAGCGGGGTCTGGCCCTGGTGGGGCTTGTGGAGG 757336022 264193 NM_003023.4(SH3BP2):c.1252C>T (p.Pro418Ser) SH3BP2 Jul 08, 2016 MedGen:CN517202 not provided germline 4 2831581 TCCTCTCCCTGCCCCTCCAGGCGATCACCCCCCGATGGGCAGAGTTTCAGGAGCTTCTCCT 587783287 167751 NM_018136.4(ASPM):c.9091C>T (p.Arg3031Ter) ASPM Feb 08, 2013 MedGen:C1837501,OMIM:608716 Primary autosomal recessive microcephaly 5 germline 1 197093255 TTACTTGTAAATTTTTCCTTATAGAGACATCGAGCTGCTTGTTTGATCCAAGCACATTATA 757641323 360113 NM_025114.3(CEP290):c.451C>T (p.Arg151Ter) CEP290 Feb 02, 2017 Human Phenotype Ontology:HP:0002335,MedGen:C0431399,Orphanet:ORPHA475,SNOMED CT:253175003,SNOMED CT:716997004;MedGen:C0265215,Orphanet:ORPHA564,SNOMED CT:29076005;MedGen:C0687120,Orphanet:ORPHA655,SNOMED CT:204958008;MedGen:CN517202 Joubert syndrome;Meckel-Gruber syndrome;Nephronophthisis;not provided germline 12 88131209 TTTTTTTTTTTACTATTTTAGTTGGCTCTTCGAAATGAGGAGGCAGAAAATGAAAACAGCA 886043113 269714 NM_004369.3(COL6A3):c.7024C>T (p.Arg2342Ter) COL6A3 Dec 05, 2016 MedGen:CN033863,OMIM:254090;MedGen:CN517202 Ullrich congenital muscular dystrophy 1;not provided germline 2 237347812 GGAACAACAGGACCCAAAGGCATCAGAGGCCGAAGGGTAAGTTTGCGTGGGCCTTGGCTGC 121908546 20940 NM_000334.4(SCN4A):c.2411C>T (p.Ser804Phe) SCN4A Aug 07, 2015 MedGen:C4016868;MedGen:C0752355,OMIM:608390,Orphanet:ORPHA99734;MedGen:CN517202 Paramyotonia congenita/myotonia congenita;Potassium aggravated myotonia;not provided germline 17 63951866 TGAACCTGTTCCTGGCTCTGCTGCTGAGCTCCTTCAGCGCCGACAGTCTGGCAGCCTCGGA 137852820 26575 NM_003688.3(CASK):c.1186C>T (p.Pro396Ser) CASK May 01, 2009 MedGen:C1845546,OMIM:300422 FG syndrome 4 germline X 41589562 CTGTATGACAAAATTAACACAAAGTCTTCACCACAAATCAGGAATCCTCCAAGCGATGCAG 387907157 40228 NM_002834.4(PTPN11):c.1516C>T (p.Gln506Ter) PTPN11 Apr 01, 2011 MedGen:C0410530,OMIM:156250,Orphanet:ORPHA2499,SNOMED CT:205481009 Metachondromatosis germline 12 112489092 ATGGTGCGGTCTCAGAGGTCAGGGATGGTCCAGACAGAAGCACAGTACCGATTTATCTATA 137852846 17705 NM_182760.3(SUMF1):c.1045C>T (p.Arg349Trp) SUMF1 May 16, 2003 MedGen:C0268263,OMIM:272200,Orphanet:ORPHA585,SNOMED CT:54898003 Multiple sulfatase deficiency germline 3 4362224 TCTTATTGTTACAGGTATCGCTGTGCTGCTCGGAGCCAGAACACACCTGATAGCTCTGCTT -1 485008 NM_024675.3(PALB2):c.2464C>T (p.Gln822Ter) PALB2 Jun 15, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 16 23629690 CCCATTGAGTCATTCACTTTTAAAGAAAATCAGCTCTGTAGAAACACATGCCAGGAGCTGC 121918294 17757 NM_017671.4(FERMT1):c.862C>T (p.Arg288Ter) FERMT1 Jan 07, 2016 MedGen:C0406557,OMIM:173650,SNOMED CT:238835001,SNOMED CT:238836000 Kindler's syndrome germline 20 6097619 CTCTGTTTTTGTCTCTAGTATGATGCTGTCCGAATAAACCAACTCTATGAGCAAGCCAGGT 780318765 196420 NM_004946.2(DOCK2):c.3310C>T (p.Arg1104Trp) DOCK2 Jun 18, 2015 MedGen:C4225328,OMIM:616433,Orphanet:ORPHA447737 Immunodeficiency 40 germline 5 170019037 GAGATGACACTTATCCCTGAGGCTGAGCTCCGGAAAGCCACCATACCAATCTTCTTCGACA 199476144 24588 m.1624C>T MT-TV Apr 17, 2014 MedGen:C0023264,OMIM:256000,Orphanet:ORPHA506,SNOMED CT:29570005;Human Phenotype Ontology:HP:0003811,MedGen:C0410916 Leigh syndrome;Neonatal death germline MT 1624 GGACGAACCAGAGTGTAGCTTAACACAAAGCACCCAACTTACACTTAGGAGATTTCAACTT 387907215 44151 NM_017565.3(FAM20A):c.826C>T (p.Arg276Ter) FAM20A Jul 11, 2012 MedGen:C2931783,OMIM:204690,Orphanet:ORPHA1031,SNOMED CT:109477002 Enamel-renal syndrome germline 17 68542796 AGCTTCCTCTCTTGCAGGATTCTGGACTTCCGACGGGTGCCGCCAACAGTGGGGAGGATAG 587777587 152012 NM_002880.3(RAF1):c.1922C>T (p.Thr641Met) RAF1 Jun 01, 2014 MedGen:C4014656,OMIM:615916 Cardiomyopathy, dilated, 1NN germline 3 12584539 CTGAGGATATCAATGCTTGCACGCTGACCACGTCCCCGAGGCTGCCTGTCTTCTAGTTGAC 121908325 19814 NM_015627.2(LDLRAP1):c.406C>T (p.Gln136Ter) LDLRAP1 May 18, 2001 MedGen:C1863512,OMIM:603813 Hypercholesterolemia, autosomal recessive germline 1 25557214 GACAAGGTGTTTGCATACATCGCCCAGAGCCAGCACAACCAGAGCCTCGAGTGCCACGCCT 121908672 21323 NM_002335.3(LRP5):c.641C>T (p.Ala214Val) LRP5 Mar 01, 2003 MedGen:C0432273,OMIM:144750,Orphanet:ORPHA2790,SNOMED CT:254131007 Worth disease germline 11 68357802 TGGAGGAGCAGAAGCTCTACTGGGCTGACGCCAAGCTCAGCTTCATCCACCGTGCCAACCT 374722096 195589 NM_000532.4(PCCB):c.683C>T (p.Pro228Leu) PCCB Sep 12, 2016 Human Phenotype Ontology:HP:0003353,MedGen:C0268579,OMIM:606054,Orphanet:ORPHA35;MedGen:CN517202;MedGen:CN169374 Propionic acidemia;not provided;not specified germline 3 136293784 AGGACACCTCCTACCTGTTCATCACTGGCCCTGATGTTGTGAAGTCTGTCACCAATGAGGA 367543286 70502 NM_002609.3(PDGFRB):c.1681C>T (p.Arg561Cys) PDGFRB Apr 10, 2017 MedGen:CN177837,SNOMED CT:254146000;MedGen:C0432284,OMIM:228550,Orphanet:ORPHA2591;MedGen:CN517202 Infantile myofibromatosis;Infantile myofibromatosis 1;not provided germline;not applicable;somatic 5 150125571 TAATTCCTGGGGTTGGTCCTCCAGAAGCCACGTTACGAGATCCGATGGAAGGTGATTGAGT 121909056 22118 NM_002700.2(POU4F3):c.865C>T (p.Leu289Phe) POU4F3 Apr 01, 2008 MedGen:C1865366,OMIM:602459 Deafness, autosomal dominant 15 germline 5 146340292 ACGTCCATCGCGGCGCCGGAGAAGCGTTCACTCGAGGCCTATTTCGCTATCCAGCCACGTC 137852298 25561 NM_000273.2(GPR143):c.266C>T (p.Ser89Phe) GPR143 Jan 01, 2007 MedGen:C3151752,OMIM:300814 Nystagmus 6, congenital, X-linked germline X 9760811 CCAATTCTCTCTTAGGTATGGTGATCCGGTCCACCGTGTGGTTAGGATTCCCAAATTTTGT 201358272 205754 NM_002047.3(GARS):c.1904C>T (p.Ser635Leu) GARS Nov 20, 2014 MedGen:C1832274,OMIM:601472,Orphanet:ORPHA99938 Charcot-Marie-Tooth disease type 2D maternal 7 30632247 TTTTTAATTTACTTTGTTTATTTTGGATAGCGGAAGCCCTGACCAGGCATGGAGTATCTCA 137852266 25662 NM_000133.3(F9):c.1307C>T (p.Ala436Val) F9 Dec 01, 1988 MedGen:C0008533,OMIM:306900,Orphanet:ORPHA98879,SNOMED CT:41788008 Hereditary factor IX deficiency disease germline X 139561992 CTGGAATTATTAGCTGGGGTGAAGAGTGTGCAATGAAAGGCAAATATGGAATATATACCAA 483352912 94408 NM_001110.3(ADAM10):c.415C>T (p.Pro139Ser) ADAM10 Nov 25, 2013 MedGen:C0406811,OMIM:615537,Orphanet:ORPHA178307,SNOMED CT:239133004 Reticulate acropigmentation of Kitamura germline 15 58679193 CAGACTCGTGGTGGCACATTTTATGTTGAGCCAGCAGAGAGATATATTAAAGACCGAACTC 542652468 171000 NM_152296.4(ATP1A3):c.410C>T (p.Ser137Phe) ATP1A3 Jun 22, 2015 Human Phenotype Ontology:HP:0000363,MedGen:C4021808;MedGen:C3553788,OMIM:614820;Human Phenotype Ontology:HP:0005280,MedGen:C1836542;Human Phenotype Ontology:HP:0000286,MedGen:C1303004;Human Phenotype Ontology:HP:0001250,MedGen:C0036572;Human Phenotype Ontology:HP:0002119,MedGen:C3278923 Abnormality of earlobe;Alternating hemiplegia of childhood 2;Depressed nasal bridge;Epicanthus;Seizures;Ventriculomegaly de novo;unknown 19 41986177 CGGCCGTGGTGATCATCACTGGCTGCTTCTCCTACTACCAGGAGGCCAAGAGCTCCAAGAT 267608437 153523 NM_003159.2(CDKL5):c.199C>T (p.Leu67Phe) CDKL5 Apr 26, 2016 MedGen:C1839333,OMIM:300672;MedGen:C0035372,OMIM:312750,Orphanet:ORPHA778,SNOMED CT:68618008 Early infantile epileptic encephalopathy 2;Rett syndrome de novo;germline X 18575407 ACTTTACGAGAGCTTAAAATGCTTCGGACTCTCAAGCAGGAAAACATTGTGGAGTTGAAGG 267606684 15180 NM_033409.3(SLC52A3):c.394C>T (p.Arg132Trp) SLC52A3 Mar 17, 2015 MedGen:CN029849,OMIM:211530 Brown-Vialetto-Van Laere syndrome 1 germline 20 765381 TCTTCAGTGACCTTCCTGCCGTTCATGAGCCGGCTGCCCACCTACTACCTCACCACCTTCT 80358476 65884 NM_000059.3(BRCA2):c.1855C>T (p.Gln619Ter) BRCA2 Sep 11, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline 13 32333333 CAAAAATCAGAACTAATTAACTGTTCAGCCCAGTTTGAAGCAAATGCTTTTGAAGCACCAC 118204450 15720 NM_000147.4(FUCA1):c.1279C>T (p.Gln427Ter) FUCA1 Apr 06, 2017 MedGen:C0016788,OMIM:230000,Orphanet:ORPHA349,SNOMED CT:64716005 Fucosidosis germline 1 23845837 TGTTTTCTGCAGATAACAATGCTGGGAATTCAAGGAGATCTGAAGTGGTCCACAGATCCAG 180177322 171743 NM_012203.1(GRHPR):c.904C>T (p.Arg302Cys) GRHPR Dec 12, 2014 MedGen:C0268165,OMIM:260000,Orphanet:ORPHA93599,SNOMED CT:40951006 Primary hyperoxaluria, type II germline 9 37436699 CCCCACATTGGCAGTGCCACCCACAGAACCCGCAACACCATGTCCTTGTTGGCAGCTAACA 61754453 153259 NM_004992.3(MECP2):c.302C>T (p.Pro101Leu) MECP2 Feb 03, 2006 MedGen:C0035372,OMIM:312750,Orphanet:ORPHA778,SNOMED CT:68618008 Rett syndrome unknown X 154032282 GGGGACCCATGTATGATGACCCCACCCTGCCTGAAGGCTGGACACGGAAGCTTAAGCAAAG -1 440047 NM_152703.4(SAMD9L):c.2956C>T (p.Arg986Cys) SAMD9L Mar 01, 2017 MedGen:C1327919,OMIM:159550,Orphanet:ORPHA2585 Myelocerebellar disorder germline 7 93133016 GTTGCAGAATATGGGAGATACACAGGTGTGCGTATCATTCACCCTCTGATTGCCCTGTACT 80338957 20935 NM_000334.4(SCN4A):c.2111C>T (p.Thr704Met) SCN4A Jun 19, 2017 Human Phenotype Ontology:HP:0007215,MedGen:C0238357,Orphanet:ORPHA682,SNOMED CT:278513006;MedGen:CN074266,OMIM:170500;MedGen:C1858891;MedGen:CN517202 Familial hyperkalemic periodic paralysis;Hyperkalemic Periodic Paralysis Type 1;Paramyotonia congenita/hyperkalemic periodic paralysis;not provided germline 17 63957427 GCAATTCAGTGGGGGCGCTGGGTAACCTGACGCTGGTGCTGGCTATCATCGTGTTCATCTT 864309542 215117 NM_001271.3(CHD2):c.2725C>T (p.Gln909Ter) CHD2 Sep 10, 2015 MedGen:C3809278,OMIM:615369 Epileptic encephalopathy, childhood-onset germline 15 92978381 GCCCGAGCGCATAGAATTGGTCAAAAGAAGCAGGTCAGTATGGAGAGGCTTCTGGAAATTG 387907156 40224 NM_017415.2(KLHL3):c.1277C>T (p.Pro426Leu) KLHL3 Mar 11, 2012 MedGen:C3469605,OMIM:614495,Orphanet:ORPHA300525 Pseudohypoaldosteronism type 2D germline 5 137637338 ACAAGACCAACGAGTGGTTCTTTGTGGCCCCGATGAACACGCGGCGGAGCAGTGTGGGTGT 121908564 20929 NM_006502.2(POLH):c.1117C>T (p.Gln373Ter) POLH Jul 09, 1999 MedGen:C1848410,OMIM:278750,Orphanet:ORPHA90342 Xeroderma pigmentosum, variant type germline 6 43610596 GCCACCCAGCTGGTTGTGAGCATTCGTGTACAAGGAGACAAACGCCTCAGCAGCCTGCGCC 150800017 372204 NM_001197104.1(KMT2A):c.4504C>T (p.Arg1502Ter) KMT2A Jan 24, 2017 MedGen:CN517202 not provided germline 11 118489816 TTACAGCAGCTGCTGGAGTGTAATAAGTGCCGAAACAGCTATCACCCTGAGTGCCTGGGAC 886039657 260272 NM_000061.2(BTK):c.307C>T (p.Gln103Ter) BTK Jul 06, 2016 MedGen:CN517202 not provided germline X 101371635 TCAATCATTGAAAGGTTCCCTTATCCCTTCCAGGTGAGTTATTTTCTCTCACCAAATCTCG 118204027 16530 NM_001039141.2(TRIOBP):c.1741C>T (p.Gln581Ter) TRIOBP Jan 01, 2006 MedGen:C1853276,OMIM:609823 Deafness, autosomal recessive 28 germline 22 37724297 ACACGAGACAACCCCAGAACATCCTGTGCCCAGCGGGACAATCCCAGAGCCTCCTCTCCCA 397507477 48845 NM_004333.4(BRAF):c.1513C>T (p.Leu505Phe) BRAF Mar 07, 2017 MedGen:CN517202 not provided germline 7 140777995 TTACAAGCCTTCAAAAATGAAGTAGGAGTACTCAGGTGAGCTTGTGTGAATTACTCTTTTC 267606794 15074 NM_001201543.1(FAM161A):c.685C>T (p.Arg229Ter) FAM161A Sep 10, 2010 MedGen:C1853734,OMIM:606068 Retinitis pigmentosa 28 germline 2 61840319 TTCCATGCAGCTGAAAAAAGAAGGAAGAAACGAAAAGAATGGGTGCCCACAATTACAGTAC 886043300 270303 NM_194456.1(KRIT1):c.715C>T (p.Gln239Ter) KRIT1 Apr 07, 2017 MedGen:C1861784,OMIM:116860;MedGen:CN517202 Cerebral cavernous malformation;not provided germline 7 92235417 ATTTACAACCCTTTGTTTGGATCAGATCTTCAGTATACAAATCGGGTAAGAGTTGAATGAA 137852968 19596 NM_153638.3(PANK2):c.1441C>T (p.Arg481Ter) PANK2 Jun 11, 2002 MedGen:C1846582,OMIM:607236 Hypoprebetalipoproteinemia, acanthocytosis, retinitis pigmentosa, and pallidal degeneration germline 20 3916955 AGCTTTGGAAACATGATGAGCAAGGAGAAGCGAGAGGCTGTCAGTAAAGAGGACCTGGCCA 1131690959 420442 NM_000551.3(VHL):c.286C>T (p.Gln96Ter) VHL May 27, 2014 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 3 10142133 CCCGTATGGCTCAACTTCGACGGCGAGCCGCAGCCCTACCCAACGCTGCCGCCTGGCACGG -1 482025 NM_003482.3(KMT2D):c.6664C>T (p.Gln2222Ter) KMT2D Oct 03, 2017 MedGen:CN517202 not provided germline 12 49041106 CTGGGCGCCTCATCTCGTCCTGGGGCTGGCCAGCCAGGGGAATTCCACACTACCCCACCTG 375661578 480453 NM_000492.3(CFTR):c.3988C>T (p.Gln1330Ter) CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline 7 117664712 CTGCAGGTTGGGCTCAGATCTGTGATAGAACAGTTTCCTGGGAAGCTTGACTTTGTCCTTG 63750139 94946 NM_000179.2(MSH6):c.3838C>T (p.Gln1280Ter) MSH6 Sep 05, 2013 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Lynch syndrome germline 2 47806488 ATGGTAGAAAATGAATGTGAAGACCCCAGCCAGGAGACTATTACGTTCCTCTATAAATTCA 397516436 52759 NM_000546.5(TP53):c.637C>T (p.Arg213Ter) TP53 Aug 04, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0085390,Orphanet:ORPHA524,SNOMED CT:428850001;Gene:553989,MedGen:C1835398,OMIM:151623;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Li-Fraumeni syndrome;Li-Fraumeni syndrome 1;not provided germline 17 7674894 GTGGAGTATTTGGATGACAGAAACACTTTTCGACATAGTGTGGTGGTGCCCTATGAGCCGC 201930497 361740 NM_007113.3(TCHH):c.991C>T (p.Gln331Ter) TCHH Jan 05, 2017 MedGen:C4310648,OMIM:617252 Uncombable hair syndrome 3 germline 1 152112226 AGGCGCGAGCAGCAGGAGAGGCGCGAGCAGCAGGAGGAGAGGCGCGAGCAGCAGCTGAGGC 137853067 22502 NM_002241.4(KCNJ10):c.595C>T (p.Arg199Ter) KCNJ10 Aug 10, 2010 MedGen:C2748572,OMIM:612780,Orphanet:ORPHA199343 SeSAME syndrome germline 1 160041938 TCCCACAATGGCAAGCCCTGCCTCATGATCCGAGTTGCCAATATGCGCAAAAGCCTCCTCA 75895925 16436 NM_018418.4(SPATA7):c.1183C>T (p.Arg395Ter) SPATA7 May 02, 2013 MedGen:C1858677,OMIM:604232 Leber congenital amaurosis 3 germline 14 88437565 ATTTGTAGGTTTTTAGAACGACTGTTCGAGCGACATATAAAACAAAATAAACATTTGGAGG 1131691554 422193 NM_000346.3(SOX9):c.509C>T (p.Pro170Leu) SOX9 Sep 18, 2015 MedGen:CN517202 not provided germline 17 72122796 GGCTGCGCGTGCAGCACAAGAAGGACCACCCGGATTACAAGTACCAGCCGCGGCGGAGGAA 1060499579 404753 NM_003742.2(ABCB11):c.2380C>T (p.Gln794Ter) ABCB11 Apr 19, 2016 MedGen:C2608083,OMIM:605479,Orphanet:ORPHA99961;MedGen:C1866138,OMIM:601847 Benign recurrent intrahepatic cholestasis 2;Progressive familial intrahepatic cholestasis 2 paternal 2 168944925 TCAATTCCTGATAAAGAGGAACAAAGGTCACAGATCAATGGTGTGTGCCTACTTTTTGTAG 763187844 450703 NM_004369.3(COL6A3):c.76C>T (p.Gln26Ter) COL6A3 Nov 14, 2016 MedGen:CN029274,OMIM:158810 Bethlem myopathy 1 germline 2 237396742 TTTCTCTCAGGCTTTCCTACAACTCATGCCCAGCAGCAGCAAGCAGGTAAGAGCCAGAAAC 142908436 227736 NM_013334.3(GMPPB):c.859C>T (p.Arg287Trp) GMPPB May 13, 2016 MedGen:C3714932,OMIM:615352,Orphanet:ORPHA363623 Muscular dystrophy-dystroglycanopathy (limb-girdle), type c, 14 germline 3 49722057 GGCGTGGTGGTCGAAGATGGTGTGTGTATCCGGCGGTGCACGGTGCTGCGGGATGCCCGGA 61749414 104985 NM_000350.2(ABCA4):c.1903C>T (p.Gln635Ter) ABCA4 Jan 01, 2016 MeSH:C535804,MedGen:C1855465,OMIM:248200;MedGen:CN517202 Stargardt disease 1;not provided germline 1 94062611 CAGGCGGAGGCTCCAGTTGGAATCTACCTCCAGCAGATGCCCTACCCCTGCTTCGTGGACG -1 443330 NM_003042.3(SLC6A1):c.130C>T (p.Arg44Trp) SLC6A1 Aug 11, 2017 MedGen:CN517202 not provided germline 3 11017341 GTGCAGAAGAAGGCGGCAGACCTCCCCGACCGGGACACGTGGAAGGGCCGCTTCGACTTCC 72555365 15977 NM_000404.3(GLB1):c.1444C>T (p.Arg482Cys) GLB1 Aug 01, 1995 MedGen:C0086652,OMIM:253010,Orphanet:ORPHA309310,SNOMED CT:238044004 Mucopolysaccharidosis, MPS-IV-B germline 3 33016744 ACTCTGGACCTTCTGGTAGAGAACATGGGACGTGTGAACTATGGTGCATATATCAACGATT 111033649 36468 NM_000155.3(GALT):c.160C>T (p.Gln54Ter) GALT Dec 04, 2012 MedGen:C0268151,OMIM:230400,Orphanet:ORPHA79239,SNOMED CT:124354006 Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase not provided 9 34647166 GTGTCAGCTCACCGCATGAAGCGGCCCTGGCAGGGTCAAGTGGAGCCCCAGCTTCTGAAGA 374574638 222987 NM_014704.3(CEP104):c.496C>T (p.Arg166Ter) CEP104 Feb 02, 2016 MedGen:C4084842,OMIM:616781 Joubert syndrome 25 germline 1 3844977 TAAGCAGATGTTTTGCCCCCAAAGGCCTCTCGAGAGAAGTTGATTGACCACTACCTTGGGC 74315343 20400 NM_014625.3(NPHS2):c.412C>T (p.Arg138Ter) NPHS2 Dec 21, 2015 MedGen:C1868672,OMIM:600995,Orphanet:ORPHA656 Nephrotic syndrome, idiopathic, steroid-resistant germline;unknown 1 179561328 GTACAAGAGTATGAAAGAGTAATTATATTCCGACTGGGACATCTGCTTCCTGGAAGAGCCA 63750611 96034 NM_000251.2(MSH2):c.1189C>T (p.Gln397Ter) MSH2 Jun 03, 2014 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Lynch syndrome germline 2 47429854 CTTAACCGACTTGCCAAGAAGTTTCAAAGACAAGCAGCAAACTTACAAGATTGTTACCGAC 118192124 76887 NM_000540.2(RYR1):c.7354C>T (p.Arg2452Trp) RYR1 Aug 22, 2017 MedGen:C0751951,OMIM:117000,Orphanet:ORPHA597,SNOMED CT:43152001;MedGen:CN239331;MedGen:CN517202 Central core disease;RYR1-Related Disorders;not provided germline;unknown 19 38500636 CTAATCCAAGCCGGCAAGGGTGAGGCCCTGCGGATCCGCGCCATCCTCCGCTCCCTTGTGC 397515460 76934 NM_015896.3(ZMYND10):c.967C>T (p.Gln323Ter) ZMYND10 Aug 08, 2013 MedGen:C3809543,OMIM:615444 Ciliary dyskinesia, primary, 22 germline 3 50342047 TTCCTGGCCCATCTGACCCTAACTGAAACCCAGCCTCCTAAGAAGGACCTGGTGTTGGAAC 587783533 169918 NM_178151.2(DCX):c.218C>T (p.Ser73Phe) DCX Feb 08, 2013 Human Phenotype Ontology:HP:0002282,MedGen:C0008519 Heterotopia germline X 111410181 GCTACTTCAAGGGGATTGTGTACGCTGTGTCCTCTGACCGTTTTCGCAGCTTTGACGCCTT -1 480737 NM_001791.3(CDC42):c.476C>T (p.Ala159Val) CDC42 Nov 01, 2017 MedGen:CN517202 not provided de novo 1 22086856 TGAAGGCTGTCAAGTATGTGGAGTGTTCTGCACTTACACAGGTAAGAATGGCATGAAACCC 200389141 132935 NM_000057.3(BLM):c.1642C>T (p.Gln548Ter) BLM Jul 18, 2017 MedGen:C0005859,OMIM:210900,Orphanet:ORPHA125,SNOMED CT:4434006;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Bloom syndrome;Hereditary cancer-predisposing syndrome;not provided germline;unknown 15 90761015 GCTTCAATAAATGACTTAGAAAGAGAAACCCAACCTTCCTATGATATTGATAATTTTGACA 587777385 136548 NM_001615.3(ACTG2):c.118C>T (p.Arg40Cys) ACTG2 Nov 24, 2015 MedGen:C1835084,OMIM:155310,Orphanet:ORPHA2241;MedGen:CN517202 Visceral myopathy;not provided de novo;germline 2 73901429 GCTGTCTTCCCCTCCATTGTGGGCCGCCCTCGCCACCAGGTGCGTGCTCATCTGGATACCA 180177225 200500 NM_000030.2(AGXT):c.473C>T (p.Ser158Leu) AGXT Jul 07, 2017 MedGen:C0268164,OMIM:259900,Orphanet:ORPHA93598,SNOMED CT:65520001 Primary hyperoxaluria, type I germline;unknown 2 240871398 CAGTGCTGCTGTTCTTAACCCACGGGGAGTCGTCCACCGGCGTGCTGCAGCCCCTTGATGG 121908416 20460 NM_004924.5(ACTN4):c.776C>T (p.Thr259Ile) ACTN4 Mar 01, 2000 MedGen:C0333497,OMIM:603278 Focal segmental glomerulosclerosis 1 germline 19 38710299 CGGCCCGGCCCGACGAGAAGGCCATAATGACCTATGTGTCCAGCTTCTACCATGCCTTTTC 137854155 58748 NM_000548.4(TSC2):c.2666C>T (p.Ala889Val) TSC2 Jul 05, 2012 MedGen:C1860707,OMIM:613254;MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000 Tuberous sclerosis 2;Tuberous sclerosis syndrome germline 16 2076094 TCAGGTTTAATCAGTACATCGTGTGTCTGGCCCATCACGTCATAGCCATGTGGTTCATCAG 121434558 32038 NM_005266.6(GJA5):c.262C>T (p.Pro88Ser) GJA5 Jun 22, 2006 MedGen:C4015977 Atrial fibrillation, somatic somatic 1 147758977 TGGGTGCTGCAGATCATCTTCGTCTCCACGCCCTCTCTGGTGTACATGGGCCACGCCATGC 886041398 264679 NM_003482.3(KMT2D):c.16501C>T (p.Arg5501Ter) KMT2D Jul 12, 2017 MedGen:C0796004,Orphanet:ORPHA2322,SNOMED CT:313426007;MedGen:CN030661,OMIM:147920;MedGen:CN517202 Kabuki syndrome;Kabuki syndrome 1;not provided de novo;germline 12 49022063 GAGGACAAAATCATCATCATCTCCAGCCGGCGAATCCCCAAAGGAGAGGAGGTGAGAGGAA 74597325 22161 NM_000492.3(CFTR):c.1657C>T (p.Arg553Ter) CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008;MedGen:C0238339,OMIM:167800,Orphanet:ORPHA676,SNOMED CT:68072000;MedGen:CN517202 Cystic fibrosis;Hereditary pancreatitis;not provided germline;unknown 7 117587811 GAAGGTGGAATCACACTGAGTGGAGGTCAACGAGCAAGAATTTCTTTAGCAAGGTGAATAA -1 475891 NM_000051.3(ATM):c.5065C>T (p.Gln1689Ter) ATM Jun 20, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 11 108299773 GGTCCTATAGATTTCTCTACCATAGCTATACAACATAGTAAAGATGCATCTTATACCAAGG 121909122 22411 NM_001083962.1(TCF4):c.1153C>T (p.Arg385Ter) TCF4 Jun 07, 2017 MedGen:C1970431,OMIM:610954,Orphanet:ORPHA2896;MedGen:CN517202 Pitt-Hopkins syndrome;not provided de novo;germline 18 55254694 TTTACATCATTTGTTAACCAACAGCAAAGCCGAATTGAAGATCGTTTAGAAAGACTGGATG 672601370 171771 NM_001244008.1(KIF1A):c.946C>T (p.Arg316Trp) KIF1A Feb 23, 2017 MedGen:C3280283,OMIM:614255;MedGen:CN517202 Mental retardation, autosomal dominant 9;not provided de novo;germline 2 240775863 TACCGAGATTCCGTGTTGACCTGGCTCCTCCGGGAAAACCTGGGTGAGAACTTGTGGGTTT 879255152 246537 NM_000527.4(LDLR):c.2164C>T (p.Gln722Ter) LDLR Mar 30, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11123197 CTTTCAGAGGCTGAGGCTGCAGTGGCCACCCAGGAGACATCCACCGTCAGGCTAAAGGTCA 61758444 439355 NM_001385.2(DPYS):c.1423C>T (p.Arg475Ter) DPYS Jul 28, 2017 MedGen:CN517202 not provided germline 8 104392804 CGAAAACCATTTGCTGAATATATTTACAAACGAATAAAGCAGCGAGACCGGGTGAGTGTGC 794728015 171809 NM_018419.2(SOX18):c.481C>T (p.Gln161Ter) SOX18 Oct 01, 2014 MedGen:C1843004,OMIM:607823 Hypotrichosis-lymphedema-telangiectasia syndrome germline 20 64048840 AACTACAAGTACCGGCCGCGCCGCAAGAAGCAGGCGCGCAAGGCCCGGCGGCTGGAGCCCG 121912485 29585 NM_000228.2(LAMB3):c.2806C>T (p.Gln936Ter) LAMB3 May 01, 1998 MedGen:C0079683,OMIM:226700,Orphanet:ORPHA79404,SNOMED CT:400140006 Junctional epidermolysis bullosa gravis of Herlitz germline 1 209618555 GCTACTGTTCTGCAGAAGATGAATGAGATCCAGGCCATTGCAGCCAGGCTCCCCAACGTGG -1 480420 NM_017934.6(PHIP):c.3706C>T (p.Arg1236Ter) PHIP Oct 16, 2017 MedGen:CN517202 not provided unknown 6 78958551 TGGGAAGTTCGATATATAGAGCATAATACACGAACATTTAATGAGCCTGGAAGCCCTATTG 387906948 39561 NM_015474.3(SAMHD1):c.427C>T (p.Arg143Cys) SAMHD1 Mar 13, 2014 MedGen:C2749659,OMIM:612952 Aicardi Goutieres syndrome 5 germline 20 36935111 GTCCGAATCATTGATACACCTCAATTTCAACGTCTTCGATACATCAAACAGCTGGGAGGTG 398123675 99917 NM_001918.3(DBT):c.871C>T (p.Arg291Ter) DBT Oct 11, 2013 MedGen:C0024776,OMIM:248600,SNOMED CT:27718001 Maple syrup urine disease germline 1 100214885 GAGATTGACCTTACTGAACTGGTTAAGCTCCGAGAAGAATTAAAACCCATTGCATTTGCTC 387906604 38588 NM_000094.3(COL7A1):c.8479C>T (p.Gln2827Ter) COL7A1 Feb 01, 2002 MedGen:C2673612 Epidermolysis bullosa dystrophica inversa, autosomal recessive germline 3 48565458 CCTAGTTATGCTGCAGACACTGCCGGCTCCCAGCTCCATGCTGTGCCTGTGCTCCGCGTCT 879254784 245976 NM_000527.4(LDLR):c.1075C>T (p.Gln359Ter) LDLR Mar 25, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11111528 TTTCTCTCTCTTCCAGATATCGATGAGTGTCAGGATCCCGACACCTGCAGCCAGCTCTGCG 587781430 150719 NM_000465.3(BARD1):c.733C>T (p.Gln245Ter) BARD1 Oct 09, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline 2 214781141 TCTAAGCAAAAGCTGGTATCCTTCTGTAGCCAACCATCTGTTATCTCCAGTCCTCAGATAA 1064792860 224748 NM_001257989.1(TYMP):c.328C>T (p.Gln110Ter) TYMP Jan 14, 2016 MedGen:C0872218,OMIM:603041,Orphanet:ORPHA298 Mitochondrial DNA depletion syndrome 1 (MNGIE type) germline 22 50529225 CAGCAGCTGGAGTGGCCAGAGGCCTGGCGCCAGCAGCTTGTGGACAAGCATTCCACAGGGG 80338729 34366 NM_014251.2(SLC25A13):c.1813C>T (p.Arg605Ter) SLC25A13 Nov 02, 2015 MedGen:C1853942,OMIM:605814,Orphanet:ORPHA247598;MedGen:CN517202 Neonatal intrahepatic cholestasis caused by citrin deficiency;not provided germline 7 96121683 GTAACTTTGCTGACTTACGAATTGCTACAGCGATGGTTCTACATTGATTTTGGAGGAGTGT 1057520753 366028 NM_006922.3(SCN3A):c.3998C>T (p.Pro1333Leu) SCN3A May 19, 2015 MedGen:CN517202 not provided germline 2 165097493 TGGTTGTGAATGCTCTTGTTGGAGCAATTCCCTCTATCATGAATGTGCTGTTGGTCTGTCT 397514671 49900 NM_003156.3(STIM1):c.1285C>T (p.Arg429Cys) STIM1 Apr 01, 2013 MedGen:C2748557,OMIM:612783,Orphanet:ORPHA317430 Immune dysfunction with T-cell inactivation due to calcium entry defect 2 germline 11 4083309 GTGACAGCAGCATTGCGGGAGCGCCTGCACCGCTGGCAACAGATCGAGATCCTCTGTGGCT 1131691667 421688 NM_000503.5(EYA1):c.889C>T (p.Arg297Ter) EYA1 May 09, 2017 MedGen:CN517202 not provided germline 8 71271835 ATTAAAGATTCAGATTCTGATCGATTGCGTCGAGGTTCAGATGGGAAATCACGTGGACGGG 104894287 28193 NM_000448.2(RAG1):c.2521C>T (p.Arg841Trp) RAG1 Nov 01, 2005 MedGen:C1835931,OMIM:609889,Orphanet:ORPHA231154 Alpha/beta T-cell lymphopenia with gamma/delta T-cell expansion, severe cytomegalovirus infection, and autoimmunity germline 11 36575825 AGGTGGCAGGCCACACTGGACAAGCATCTCCGGAAGAAGATGAACCTCAAACCAATCATGA 587784076 168126 NM_022455.4(NSD1):c.1810C>T (p.Arg604Ter) NSD1 Jan 12, 2017 MedGen:C0004903,OMIM:130650,Orphanet:ORPHA116,SNOMED CT:81780002;MedGen:CN035106,OMIM:117550;MedGen:CN517202 Beckwith-Wiedemann syndrome;Sotos syndrome 1;not provided germline 5 177210209 CCTGAGGGTGCTTTGATCTCAAAGTGTTCTCGAGAGAAGAATAAACCCCAACGAAGCCTGG 1057517668 359067 NM_003412.3(ZIC1):c.1165C>T (p.Gln389Ter) ZIC1 Feb 28, 2018 MedGen:C4225269,OMIM:616602 Craniosynostosis 6 germline 3 147413372 TTATTCCTGCAGGTCCACGAATCCTCCTCGCAGGGCTCGCAGCCTTCGCCGGCCGCCAGCT 104894843 25782 NM_000169.2(GLA):c.1024C>T (p.Arg342Ter) GLA Jun 07, 2016 Human Phenotype Ontology:HP:0001071,MedGen:C0002986,OMIM:301500,Orphanet:ORPHA324,SNOMED CT:16652001 Fabry disease germline X 101398075 TTTCAGGGAGACAACTTTGAAGTGTGGGAACGACCTCTCTCAGGCTTAGCCTGGGCTGTAG 118204042 15543 NM_001010892.2(RSPH4A):c.325C>T (p.Gln109Ter) RSPH4A May 27, 2017 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244;MedGen:C2675229,OMIM:612649 Ciliary dyskinesia;Ciliary dyskinesia, primary, 11 germline 6 116616948 CCGGCCAGACAAGACCTCGCGGCACCACCTCAGTCGGACAGGACCACGAGTGTGATTCCTG 587777332 132624 NM_005051.2(QARS):c.1207C>T (p.Arg403Trp) QARS Apr 03, 2014 MedGen:C4014239,OMIM:615760,Orphanet:ORPHA404437 Microcephaly, progressive, with seizures and cerebral and cerebellar atrophy germline 3 49100049 GGCAAGTTTTCAGAGGGCGAGGCCACACTACGGATGAAGCTGGTGATGGAGGATGGCAAGA 863225198 214304 NM_019892.5(INPP5E):c.1064C>T (p.Thr355Met) INPP5E Feb 23, 2015 Human Phenotype Ontology:HP:0002335,MedGen:C0431399,Orphanet:ORPHA475,SNOMED CT:253175003,SNOMED CT:716997004 Joubert syndrome unknown 9 136433250 GGCGGGAGTGGGAGACTCGTCTGCAGGAGACGCTGGGCCCGCACTATGTGCTGCTGTCCTC 137854577 15853 NM_000038.5(APC):c.643C>T (p.Gln215Ter) APC Nov 15, 2016 MedGen:C2673218;MedGen:C2713442,OMIM:175100;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202;MedGen:CN169374 Brain tumor-polyposis syndrome 2;Familial adenomatous polyposis 1;Hereditary cancer-predisposing syndrome;not provided;not specified germline;unknown 5 112780901 GGTACCTGCCAGGATATGGAAAAACGAGCACAGGTAAGTTACTTGTTTCTAAGTGATAAAA 386833750 15786 NM_001080522.2(CC2D2A):c.3145C>T (p.Arg1049Ter) CC2D2A Dec 05, 2017 MedGen:C1857662,OMIM:216360,Orphanet:ORPHA1454;Human Phenotype Ontology:HP:0002335,MedGen:C0431399,Orphanet:ORPHA475,SNOMED CT:253175003,SNOMED CT:716997004;MedGen:CN121474;MedGen:CN517202 COACH syndrome;Joubert syndrome;Joubert syndrome 9/15, digenic;not provided germline 4 15563485 GGAGACATAAAGCTGCTGGTGAACATTGTGCGAGCTTACGACATTCCAGTGAGGAAGCCGG 387906906 39432 NM_021625.4(TRPV4):c.2219C>T (p.Thr740Ile) TRPV4 Apr 02, 2014 MedGen:C0265281,OMIM:156530,Orphanet:ORPHA2635,SNOMED CT:22764001;MedGen:C0027868,Orphanet:ORPHA68381;Human Phenotype Ontology:HP:0002652,MedGen:C0410528,SNOMED CT:105986008 Metatrophic dysplasia;Neuromuscular Diseases;Skeletal dysplasia germline 12 109786827 CTGACCCTCCCTCCCCGCAGTGGGCCACCACCATCCTGGACATTGAGCGCTCCTTCCCCGT 201697532 272152 NM_000091.4(COL4A3):c.4981C>T (p.Arg1661Cys) COL4A3 Jul 11, 2016 MedGen:C1567744,OMIM:203780,Orphanet:ORPHA88919;MedGen:CN517202 Alport syndrome, autosomal recessive;not provided germline 2 227311838 AAAGCTGGGGAATTAGAAAAAATAATAAGTCGCTGTCAGGTGTGCATGAAGAAAAGACACT 762543032 214270 NM_153704.5(TMEM67):c.244C>T (p.Pro82Ser) TMEM67 Feb 23, 2015 MedGen:C1853153,OMIM:610688 Joubert syndrome 6 unknown 8 93755798 TTTTTTTTAGGAACTTCATGTGTATGTCTACCAGGATTTCAGATGATCTCTAATAATGGAG 121908835 21566 NM_003722.4(TP63):c.727C>T (p.Arg243Trp) TP63 Aug 26, 2016 MedGen:C1858562,OMIM:604292;MedGen:CN517202 Ectrodactyly, ectodermal dysplasia, and cleft lip/palate syndrome 3;not provided germline;unknown 3 189864379 AAAGCTGAGCACGTCACGGAGGTGGTGAAGCGGTGCCCCAACCATGAGCTGAGCCGTGAAT 193302848 34565 NM_032520.4(GNPTG):c.196C>T (p.Arg66Ter) GNPTG Jul 05, 2012 MedGen:C1854896,OMIM:252605,Orphanet:ORPHA423470 Mucolipidosis III Gamma not provided 16 1361760 AGGTCTCTTCCAGGACCCGTGCATCTCTTCCGACTCTCGGGCAAGTGCTTCAGCCTGGTGG 121912290 47560 NM_001363.4(DKC1):c.949C>T (p.Leu317Phe) DKC1 May 10, 2012 MedGen:C1148551,OMIM:305000 Dyskeratosis congenita X-linked germline X 154770792 AATGCCATCTGCTATGGGGCCAAGATTATGCTTCCAGGTGTTCTTCGATATGAGGACGGCA 121918151 15706 NM_000312.3(PROC):c.866C>T (p.Pro289Leu) PROC Aug 31, 1991 MedGen:C2676759,OMIM:612304 Thrombophilia, hereditary, due to protein C deficiency, autosomal recessive germline 2 127428426 ACCTGGACATCAAGGAGGTCTTCGTCCACCCCAACTACAGCAAGAGCACCACCGACAATGA 730882050 181165 NM_144988.3(ALG14):c.194C>T (p.Pro65Leu) ALG14 Feb 18, 2015 MedGen:C4015596,OMIM:616227 Myasthenic syndrome, congenital, 15 germline 1 95064960 TGCTTGGGAGCTTGTCCAATGCCTACTCACCTAGACATTATGTCATTGCTGACACTGATGA 267606865 15128 NM_021828.4(HPSE2):c.457C>T (p.Arg153Ter) HPSE2 Jun 11, 2010 MedGen:C0403555,OMIM:236730,SNOMED CT:236533008 Ochoa syndrome germline 10 99144391 CCTTCTTTCTTTCTTTTTGTAGACATTGTTCGAAGTGATGTTGCCTTAGATAAACAGAAAG 119479065 20015 NM_022436.2(ABCG5):c.1222C>T (p.Arg408Ter) ABCG5 Jan 01, 2001 MedGen:C0342907,OMIM:210250,Orphanet:ORPHA2882,SNOMED CT:238104009 Sitosterolemia germline 2 43824015 TTGTTCCTCCTTTTCTTCGTTCTGCGGGTCCGAAGCAATGTGCTAAAGGGTGCTATCCAGG 786202457 184747 NM_001042492.2(NF1):c.7348C>T (p.Arg2450Ter) NF1 Apr 28, 2017 MedGen:C0027672,SNOMED CT:699346009;Human Phenotype Ontology:HP:0009737,MedGen:C1860334;MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003;Human Phenotype Ontology:HP:0100698,MedGen:C1827970;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Lisch nodules;Neurofibromatosis, type 1;Subcutaneous neurofibromas;not provided germline;unknown 17 31350209 TTAGCTTTACTTACAGTGTCTGAAGAAGTTCGAAGTCGCTGCAGCCTAAAACATAGAAAGT -1 445025 NM_003482.3(KMT2D):c.8059C>T (p.Arg2687Ter) KMT2D Sep 01, 2017 MedGen:CN517202 not provided germline 12 49039605 TCTCTTTTTTTTGCATAGCGCCAGCGACTACGAGAGCTGCTGATTCGGCAGCAGATCCAGC 1131690813 420605 NM_004360.4(CDH1):c.2311C>T (p.Gln771Ter) CDH1 Apr 14, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 16 68829669 CTTTTTTCTCCAAAGGACTTTGACTTGAGCCAGCTGCACAGGGGCCTGGACGCTCGGCCTG 397516456 52796 NM_000364.3(TNNT2):c.304C>T (p.Arg102Trp) TNNT2 Aug 23, 2017 MedGen:C1861864,OMIM:115195;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Familial hypertrophic cardiomyopathy 2;Primary familial hypertrophic cardiomyopathy;not provided germline 1 201365298 GCCGCAGCGGTCCACCCACAGGACATCCACCGGAAGCGCATGGAGAAGGACCTGAATGAGT 267606876 18587 NM_016247.3(IMPG2):c.2716C>T (p.Arg906Ter) IMPG2 Aug 13, 2010 MedGen:C3150819,OMIM:613581 Retinitis pigmentosa 56 germline 3 101243615 TCAGGAGCTTTGGTGGTTTTCTTCAGCCTCCGAGTGACTAACATGATGTTTTCAGAAGATC 137853167 25593 NM_000351.5(STS):c.1022C>T (p.Ser341Leu) STS Aug 15, 1997 MedGen:C0079588,OMIM:308100,Orphanet:ORPHA281210,SNOMED CT:72523005 X-linked ichthyosis with steryl-sulfatase deficiency germline X 7305109 TGGCTAATGATACCCTCATCTACTTCACATCGGACCAGGGAGCACATGTAGAAGAAGTGTC 587777408 137032 NM_021008.3(DEAF1):c.670C>T (p.Arg224Trp) DEAF1 May 01, 2014 MedGen:C4014414,OMIM:615828 Mental retardation, autosomal dominant 24 germline 11 686992 TCATGACTGCTGCCCTTCCTTGCAGGCGGCCGGGGACGGTGCATCAAGCAGGGGGAGAACT 1064793817 410973 NM_007194.3(CHEK2):c.28C>T (p.Gln10Ter) CHEK2 Jul 07, 2015 MedGen:CN517202 not provided germline 22 28734694 GTGATGTCTCGGGAGTCGGATGTTGAGGCTCAGCAGTCTCATGGCAGCAGTGCCTGTTCAC 730882001 181011 NM_000546.5(TP53):c.493C>T (p.Gln165Ter) TP53 Jan 03, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline 17 7675119 ACCCGCGTCCGCGCCATGGCCATCTACAAGCAGTCACAGCACATGACGGAGGTTGTGAGGC 1085307429 414411 NM_000020.2(ACVRL1):c.1468C>T (p.Q490*) ACVRL1 - MedGen:C1832529 Pulmonary arterial hypertension related to hereditary hemorrhagic telangiectasia germline 12 51920849 CTCACCGCGCTGCGGATCAAGAAGACACTACAAAAAATTAGCAACAGTCCAGAGAAGCCTA 483352910 51367 NM_005984.4(SLC25A1):c.821C>T (p.Ala274Val) SLC25A1 Apr 29, 2013 MedGen:C2746066,OMIM:615182,Orphanet:ORPHA19 Combined d-2- and l-2-hydroxyglutaric aciduria germline 22 19176421 TGCAGATCCTGAAGAAGGAGGGGCTCAAGGCGTGAGTGGGGGAGGGGCAGGGCTATTGTCC 869312753 226318 NM_000038.5(APC):c.562C>T (p.Gln188Ter) APC Nov 20, 2015 MedGen:C1858438;MedGen:CN240755 Colorectal cancer, susceptibility to;Familial adenomatous polyposis germline 5 112780820 TTTTCCTTACAAACAGATATGACCAGAAGGCAATTGGAATATGAAGCAAGGCAAATCAGAG 104895105 17596 NM_000243.2(MEFV):c.1432C>T (p.His478Tyr) MEFV Jan 01, 2004 MedGen:C0031069,OMIM:249100,Orphanet:ORPHA342,SNOMED CT:12579009;MedGen:C1851347,OMIM:134610 Familial Mediterranean fever;Familial mediterranean fever, autosomal dominant germline 16 3247171 CAGGTGTACTACTTCCTGGAGCAGCAAGAGCATTTCTTTGTGGCCTCACTGGAGGACGTGG 515726208 136367 NM_003122.4(SPINK1):c.199C>T (p.Arg67Cys) SPINK1 Mar 13, 2014 MedGen:C0238339,OMIM:167800,Orphanet:ORPHA676,SNOMED CT:68072000 Hereditary pancreatitis germline 5 147824702 TATATTTTTTTTAATCTCTACTGCAGGAAACGCCAGACTTCTATCCTCATTCAAAAATCTG 398123789 100230 NM_003494.3(DYSF):c.4756C>T (p.Arg1586Ter) DYSF Sep 16, 2016 MedGen:C1850889,OMIM:253601,Orphanet:ORPHA268;MedGen:C1850808,OMIM:254130,Orphanet:ORPHA45448 Limb-girdle muscular dystrophy, type 2B;Miyoshi muscular dystrophy 1 germline 2 71658995 CAGGAGTGCTTGGTCCGTATCTACATTGTCCGAGCATTTGGCCTGCAGCCCAAGGACCCCA 397517327 55094 NM_022124.5(CDH23):c.3706C>T (p.Arg1236Ter) CDH23 Jun 30, 2015 MedGen:C1832845,OMIM:601067;MedGen:CN517202 Usher syndrome, type 1D;not provided germline 10 71730595 ACGTCAGTCATCGTGGTCCAAGCCACAGACCGAGACTCTGGTGAGGCTGGCAGGAGGAAGC 199804679 94238 NM_016204.3(GDF2):c.254C>T (p.Pro85Leu) GDF2 Sep 05, 2013 MedGen:C3809710,OMIM:615506 Telangiectasia, hereditary hemorrhagic, type 5 germline 10 47322922 TCCCTTCGCAGGACAAAACCAGGGTGGAGCCGCCGCAGTACATGATTGACCTGTACAACAG 121913061 31599 NM_000186.3(CFH):c.1222C>T (p.Gln408Ter) CFH Feb 01, 2008 MedGen:C0730295,OMIM:126700,SNOMED CT:312926005 Basal laminar drusen germline 1 196690125 TATAATCAAAATCATGGAAGAAAGTTTGTACAGGGTAAATCTATAGACGTTGCCTGCCATC 63750037 96605 NM_000251.2(MSH2):c.547C>T (p.Gln183Ter) MSH2 Jul 19, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Hereditary cancer-predisposing syndrome;Lynch syndrome germline 2 47410274 CTAGGACTGTGTGAATTCCCTGATAATGATCAGTTCTCCAATCTTGAGGCTCTCCTCATCC 104894790 26312 NM_004006.2(DMD):c.10141C>T (p.Arg3381Ter) DMD Jan 16, 2017 MedGen:C3668940,OMIM:302045;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001;MedGen:CN517202 Dilated cardiomyopathy 3B;Duchenne muscular dystrophy;not provided germline X 31178751 GACTTTGCCAAGGTACTAAAAAACAAATTTCGAACCAAAAGGTATTTTGCGAAGCATCCCC 137852770 23768 NM_000182.4(HADHA):c.1132C>T (p.Gln378Ter) HADHA Nov 10, 2010 MedGen:C0342786,OMIM:609015,SNOMED CT:237999008 Mitochondrial trifunctional protein deficiency germline 2 26204150 GGTGCAGGGCTGATGGGAGCAGGCATCGCCCAAGTCTCCGTGGATAAGGGGCTAAAGACTA 193922920 39289 NM_007317.2(KIF22):c.442C>T (p.Pro148Ser) KIF22 Dec 09, 2011 MedGen:C1863732,OMIM:603546,Orphanet:ORPHA93360 Spondyloepimetaphyseal dysplasia with multiple dislocations germline 16 29798640 CTGGGCAGCCCAGAGCAACCTGGGGTGATCCCGCGGGCTCTCATGGACCTCCTGCAGCTCA 878854364 226480 NM_000070.2(CAPN3):c.439C>T (p.Arg147Ter) CAPN3 Jan 15, 2016 MedGen:C1869123,OMIM:253600,Orphanet:ORPHA267;MedGen:C1869123,OMIM:253600,Orphanet:ORPHA267 Limb-girdle muscular dystrophy, type 2A;Limb-girdle muscular dystrophy, type 2A germline;inherited 15 42386226 TGCCTGACCCTGAACCAGCACCTTCTTTTCCGAGTCATACCCCATGATCAAAGTTTCATCG 267607138 20547 NM_004239.4(TRIP11):c.790C>T (p.Arg264Ter) TRIP11 Jan 21, 2010 MedGen:C0265273,OMIM:200600,Orphanet:ORPHA93299,SNOMED CT:42725006 Achondrogenesis, type IA germline 14 92015729 CATCGAGAAGAATTAAGTGACTATGAAGAACGAATTGAAGAACTTGAAAATCTGTTACAAC 122445106 26778 NM_000489.4(ATRX):c.4862C>T (p.Thr1621Met) ATRX Jul 01, 2002 MedGen:C1845055,OMIM:301040,Orphanet:ORPHA847 ATR-X syndrome germline X 77633660 TTCTTTTGTGTGACAAACTGGATTTCAGCACGGCGTTAGTGGTTTGTCCTCTTAATACTGC -1 437824 NM_000702.3(ATP1A2):c.1261C>T (p.Arg421Ter) ATP1A2 Jul 19, 2017 MedGen:C0338484,Orphanet:ORPHA569,SNOMED CT:95656000;MedGen:CN517202 Familial hemiplegic migraine;not provided germline 1 160129024 AAACGATCCCCTACGTGGACGGCCCTGTCTCGAATTGCTGGTCTCTGCAACCGCGCCGTCT 778555849 212489 NM_005732.3(RAD50):c.3553C>T (p.Arg1185Ter) RAD50 Jan 20, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C2751318,OMIM:613078,Orphanet:ORPHA240760 Hereditary cancer-predisposing syndrome;Nijmegen breakage syndrome-like disorder germline 5 132638158 GCTTCTGATAAAAGGCGGAATTATAACTACCGAGTGGTGATGCTGAAGGGAGACACAGCCT 137852906 17931 NM_000419.4(ITGA2B):c.1750C>T (p.Arg584Ter) ITGA2B Jun 15, 1992 MedGen:C0040015,OMIM:273800,Orphanet:ORPHA849,SNOMED CT:32942005 Glanzmann thrombasthenia germline 17 44380004 CCCATCTGCCACACCACCATGGCCTTCCTTCGAGTACGCCCAGGCAGGGGATTGGCAGGGC -1 453838 NM_000038.5(APC):c.697C>T (p.Gln233Ter) APC Apr 24, 2017 MedGen:C2713442,OMIM:175100;MedGen:C0027672,SNOMED CT:699346009 Familial adenomatous polyposis 1;Hereditary cancer-predisposing syndrome germline 5 112792497 CAAATCGAAAAGGACATACTTCGTATACGACAGCTTTTACAGTCCCAAGCAACAGAAGCAG -1 439855 NM_031844.2(HNRNPU):c.481C>T (p.Gln161Ter) HNRNPU Aug 09, 2017 MedGen:CN240910,OMIM:617391 Epileptic encephalopathy, early infantile, 54 germline 1 244863827 GGCGCGGGCGACGAGAACGGGCACGGGGAGCAGCAGCCTCAACCGCCGGCGACGCAGCAGC 606231290 167477 NM_001302946.1(TRNT1):c.461C>T (p.Thr154Ile) TRNT1 Nov 12, 2014 MedGen:C4015172,OMIM:616084,Orphanet:ORPHA369861 Sideroblastic anemia with B-cell immunodeficiency, periodic fevers, and developmental delay germline 3 3140628 GGCAGAAAGATGCGGAACGCAGAGATCTCACTATAAATTCTATGTTTTTAGGTAATATTTG 267607101 20250 NM_015093.5(TAB2):c.622C>T (p.Pro208Ser) TAB2 Jun 11, 2010 MedGen:C3150216,OMIM:614980 Congenital heart defects, multiple types, 2 germline 6 149378537 CATGGTGTACCTCCACCTGTACTTAACAGTCCACAGGGAAATTCTATCTATATTAGGCCTT 121917784 27085 NM_000136.2(FANCC):c.37C>T (p.Gln13Ter) FANCC Sep 22, 2016 MedGen:C0015625,Orphanet:ORPHA84,SNOMED CT:30575002;MedGen:C3468041,OMIM:227645;MedGen:CN517202 Fanconi anemia;Fanconi anemia, complementation group C;not provided germline;unknown 9 95249255 CAAGATTCAGTAGATCTTTCTTGTGATTATCAGTTTTGGATGCAGAAGCTTTCTGTATGGG 397514478 40274 NM_001160223.1(RNF170):c.595C>T (p.Arg199Cys) RNF170 May 29, 2015 MedGen:C1837015,OMIM:608984 Ataxia, sensory, autosomal dominant germline 8 42856341 TTTTCAGTCGGGGGCCTTTTCTGGATGTTTCGCATCAGGATAATACTTTGTTTAATGGGAG 77101217 22146 NM_000492.3(CFTR):c.1477C>T (p.Gln493Ter) CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline;unknown 7 117559548 AAGCACAGTGGAAGAATTTCATTCTGTTCTCAGTTTTCCTGGATTATGCCTGGCACCATTA -1 441526 NM_000545.6(HNF1A):c.814C>T (p.Arg272Cys) HNF1A Jul 18, 2017 MedGen:CN517202 not provided germline 12 120994264 GTGCGTGTCTACAACTGGTTTGCCAACCGGCGCAAAGAAGAAGCCTTCCGGCACAAGCTGG 764735889 445901 NM_000546.5(TP53):c.949C>T (p.Gln317Ter) TP53 Jul 03, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline 17 7673579 GCACTGCCCAACAACACCAGCTCCTCTCCCCAGCCAAAGAAGAAACCACTGGATGGAGAAT 267607086 27882 NM_001355436.1(SPTB):c.5266C>T (p.Arg1756Ter) SPTB Aug 01, 2009 MedGen:C2674219,OMIM:616649 Spherocytosis type 2 germline 14 64772867 CGGGTGGACAATGTGAATGCCTTCATCGAGCGACTCATCGACGCGGGCCACAGCGAGGCGG 587779865 132902 NM_000051.3(ATM):c.7456C>T (p.Arg2486Ter) ATM Nov 06, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Ataxia-telangiectasia syndrome;Hereditary cancer-predisposing syndrome;not provided germline 11 108330362 AGTGGAGAAGAACATGATATGTGGGTATTCCGACTTTGTTCCCTCTGGCTTGAAAATTCTG 375088539 185943 NM_001253815.1(SLC52A2):c.808C>T (p.Gln270Ter) SLC52A2 Jul 15, 2015 MedGen:C3553538,OMIM:614707;MedGen:CN517202 Brown-Vialetto-Van Laere syndrome 2;not provided germline 8 144360300 ACCACCCCTGGTCCAGACCCTAAGGCCTATCAGCTTCTATCAGCCCGCAGTGCCTGCCTGC 376764423 175522 NM_000260.3(MYO7A):c.5899C>T (p.Arg1967Ter) MYO7A Nov 10, 2016 MedGen:C1838701,OMIM:600060;MedGen:CN239407;Human Phenotype Ontology:HP:0000556,MedGen:C0854723,Orphanet:ORPHA71862,SNOMED CT:314407005;MedGen:C1568247,OMIM:276900,Orphanet:ORPHA231169 Deafness, autosomal recessive 2;MYO7A-Related Disorders;Retinal dystrophy;Usher syndrome, type 1 germline;unknown 11 77208472 CCTGAGAATGACTTCTTCTTTGACTTTGTTCGACACTTGACAGACTGGATAAAGAAAGCTC 104886094 35708 NM_000495.4(COL4A5):c.1117C>T (p.Arg373Ter) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108586699 TTGCCTGGGTTGCCTGGAGAAAAAGGAGAGCGAGGATTTCCTGGAATACAGGGTCCACCTG 180177191 200422 NM_000030.2(AGXT):c.28C>T (p.Pro10Ser) AGXT Nov 27, 2014 MedGen:C0268164,OMIM:259900,Orphanet:ORPHA93598,SNOMED CT:65520001 Primary hyperoxaluria, type I germline 2 240868893 ACCATGGCCTCTCACAAGCTGCTGGTGACCCCCCCCAAGGCCCTGCTCAAGCCCCTCTCCA 1135402725 171910 NM_003477.2(PDHX):c.1336C>T (p.Arg446Ter) PDHX Dec 09, 2017 MedGen:C1855553,OMIM:245349,Orphanet:ORPHA255182 Pyruvate dehydrogenase E3-binding protein deficiency germline;inherited 11 34995002 CAGGCCTGCATTTTGGCGGTTGGGAGGTTCCGACCTGTGCTGAAGCTCACTGAGGATGAAG 1057520737 379501 NM_002547.2(OPHN1):c.1246C>T (p.Gln416Ter) OPHN1 May 15, 2015 MedGen:CN517202 not provided germline X 68192949 GGGTTGTACCGCACTGTGGGCAGCAATATTCAGGTTCAGAAGCTGCTGAATGCCTTTTTTG 386834080 71297 NM_017890.4(VPS13B):c.3427C>T (p.Arg1143Ter) VPS13B Dec 08, 2016 MedGen:C0265223,OMIM:216550,Orphanet:ORPHA193,SNOMED CT:56604005;MedGen:CN517202 Cohen syndrome;not provided germline 8 99442617 CCTCTGCAGGAGATTCCATTTGTTATCCCACGACCCATCCTTGAAGAAGGTATATGTTAAC 137853154 20357 NM_170784.2(MKKS):c.442C>T (p.Gln148Ter) MKKS Sep 21, 2001 MedGen:C4016908 Bardet-biedl syndrome 2/6, digenic germline 20 10413073 TGTCGAATCCCAGTGGACTTTAGTAGTACTCAGATCCTCCTTTGTTTGGTGCGTAGTATAT 121907944 19074 NM_000152.4(GAA):c.710C>T (p.Ala237Val) GAA Jan 25, 2005 MedGen:CN568813 Glycogen storage disease II, adult form germline 17 80107574 CTCTGTCCCGCAGGCTGAACACGACGGTGGCGCCCCTGTTCTTTGCGGACCAGTTCCTTCA 886041771 265035 NM_001456.3(FLNA):c.4519C>T (p.Gln1507Ter) FLNA May 23, 2016 MedGen:CN517202 not provided germline X 154358524 GTGGACGTGGTAGACAACGCTGATGGCACCCAGACCGTCAATTATGTGCCCAGCCGAGAAG 875989787 227581 NM_001198868.1(CAPN1):c.1579C>T (p.Gln527Ter) CAPN1 May 09, 2016 MedGen:C4310800,OMIM:616907 Spastic paraplegia 76, autosomal recessive germline 11 65206793 CTCCCCACTCTCTGCAGGGAGCTGGATGACCAGATCCAGGCCAATCTCCCCGATGAGGTGC 121912849 32495 NM_000094.3(COL7A1):c.6187C>T (p.Arg2063Trp) COL7A1 Apr 03, 2015 MedGen:C0079474,OMIM:226600,SNOMED CT:48528004;MedGen:CN517202 Recessive dystrophic epidermolysis bullosa;not provided germline 3 48575236 CCTCACCCGCTATTTGCATTTCAGGGAGAACGGGGAGAGAAAGGAGAACGTGGAGAACAGG 376023420 40087 NM_000196.3(HSD11B2):c.664+14C>T HSD11B2 Aug 01, 1995 MedGen:C2936861,OMIM:218030 Apparent mineralocorticoid excess germline 16 67436156 TGTGGGGAGCCCAGCGGGTGAGTGCCCCCCCCCACTGGAGCAAAAAGGAGCCCCCTGGGGT 113993996 34393 NM_016038.3(SBDS):c.505C>T (p.Arg169Cys) SBDS Jul 17, 2008 MedGen:C0272170,OMIM:260400,Orphanet:ORPHA811,SNOMED CT:89454001 Shwachman syndrome not provided 7 66991256 AAGCAGTTAAAAGAGAAAATGAAGATAGAACGTGCTCACATGAGGCTTCGGTTCATCCTTC 1057519599 362483 NM_001198903.1(YY1AP1):c.664C>T (p.Gln222Ter) YY1AP1 Feb 14, 2017 MedGen:C1865267,OMIM:602531,Orphanet:ORPHA79094 Grange syndrome germline 1 155676622 CAGCAGAAGGAGGTAGAGAAGGTTAAACCCCAGTGTAAGGAAGTTCATCAGACCCTGATTC 119462985 18284 NM_007171.3(POMT1):c.1540C>T (p.Arg514Ter) POMT1 Mar 20, 2014 MedGen:C3150415,OMIM:613155;MedGen:CN033898,OMIM:236670 Congenital muscular dystrophy-dystroglycanopathy with mental retardation, type B1;Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type a, 1 germline 9 131518945 GGGAGCACGGTGTGGAACGTGGAGGAGCACCGATACGGCGCGAGTGAGTCCGCGGCGTGGC 45517169 58315 NM_000548.4(TSC2):c.1372C>T (p.Arg458Ter) TSC2 May 26, 2017 MedGen:C1860707,OMIM:613254;MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000;MedGen:CN517202 Tuberous sclerosis 2;Tuberous sclerosis syndrome;not provided germline 16 2062982 AGCAGGCTGCCGTCCCGCAGGAGCGAGTCCCGAGGCGCCGTGCGCATCAAGGTGCTGGACG 61748477 15333 NM_000552.4(VWF):c.2372C>T (p.Thr791Met) VWF May 01, 2010 MedGen:CN517202;MedGen:C1282975,Orphanet:ORPHA166093,SNOMED CT:359732009 not provided;von Willebrand disease type 2N germline 12 6044361 TGCGGGCTGAAGGGCTCGAGTGTACCAAAACGTGCCAGAACTATGACCTGGAGTGCATGAG 398123157 98349 NM_000117.2(EMD):c.355C>T (p.Gln119Ter) EMD Jan 17, 2013 MedGen:CN517202 not provided germline X 154380323 GAGTCTGCCGGCCCGTCCAGGGCTGTCCGCCAGTCAGTGACTTCATTCCCAGATGCTGACG 28936699 22804 NM_032977.3(CASP10):c.1241C>T (p.Ala414Val) CASP10 Jun 01, 2002 Human Phenotype Ontology:HP:0012539,MedGen:C0024305,OMIM:605027,Orphanet:ORPHA547,SNOMED CT:1929004 Malignant lymphoma, non-Hodgkin somatic 2 201209388 AAGAGATACAGCCTTCCGTATCCATCGAAGCAGATGCTCTGAACCCTGAGCAGGCACCCAC 587777169 106654 NM_012414.3(RAB3GAP2):c.3637C>T (p.Arg1213Ter) RAB3GAP2 May 01, 2013 MedGen:C3280214,OMIM:614225 Warburg micro syndrome 2 germline 1 220153976 GGGGAAATGGATCCAAATTTTATTTCTGTACGACAACAGGTAAATTATAGCTATTGGATTT 63751460 95313 NM_000249.3(MLH1):c.1684C>T (p.Gln562Ter) MLH1 Sep 05, 2013 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Lynch syndrome germline 3 37042284 ATTTTTATTTTCAGTGAAGAACTGTTCTACCAGATACTCATTTATGATTTTGCCAATTTTG 179363901 26884 NM_001110792.1(MECP2):c.5C>T (p.Ala2Val) MECP2 Apr 26, 2016 MedGen:C0035372,OMIM:312750,Orphanet:ORPHA778,SNOMED CT:68618008 Rett syndrome de novo;germline X 154097661 GGGCTGTGGTAAAAGCCGTCCGGAAAATGGCCGCCGCCGCCGCCGCCGCGCCGAGCGGAGG -1 434421 NM_001001563.3(TIMM50):c.755C>T (p.Thr252Met) TIMM50 Oct 03, 2017 MedGen:CN510468,OMIM:617698 3-METHYLGLUTACONIC ACIDURIA, TYPE IX germline 19 39485761 TGCAGGAACCGTACTACCAGCCACCCTACACGCTCGTTTTGGAGCTCACCGGCGTCCTCTT 119472026 19101 NM_014080.4(DUOX2):c.1300C>T (p.Arg434Ter) DUOX2 Jul 11, 2002 MedGen:C1846632,OMIM:607200 Thyroid dyshormonogenesis 6 germline 15 45108887 GACTATGTGGCCAGCAGCATCCAACGTGGCCGAGATATGGGGCTGCCCAGCTATAGCCAGG 398123872 100389 NM_004006.2(DMD):c.2032C>T (p.Gln678Ter) DMD Oct 05, 2012 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009;MedGen:C3668940,OMIM:302045;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Becker muscular dystrophy;Dilated cardiomyopathy 3B;Duchenne muscular dystrophy germline X 32545295 GCTGTCACCACCACTCAGCCATCACTAACACAGACAACTGTAATGGAAACAGTAACTACGG 886039668 260212 NM_001127221.1(CACNA1A):c.1363C>T (p.Arg455Ter) CACNA1A Jun 13, 2016 MedGen:CN517202 not provided germline 19 13317307 ATCTTTTCCCTGGCAGGTTCTCCCTTCGCCCGAGCCAGCATTAAAAGTGCCAAGCTGGAGA 199472906 78094 NM_000238.3(KCNH2):c.1421C>T (p.Thr474Ile) KCNH2 Oct 10, 2014 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MedGen:CN517202 Congenital long QT syndrome;not provided germline 7 150952561 TTGTGGACATCCTCATCAACTTCCGCACCACCTACGTCAATGCCAACGAGGAGGTGGTCAG 587778869 132328 NM_000321.2(RB1):c.103C>T (p.Gln35Ter) RB1 Sep 16, 2013 Human Phenotype Ontology:HP:0009919,MeSH:D012175,MedGen:C0035335,OMIM:180200,Orphanet:ORPHA790 Retinoblastoma somatic 13 48304015 CCGCCGCCCCCTCCTGAGGAGGACCCAGAGCAGGACAGCGGCCCGGAGGACCTGCCTCTCG 143739249 59802 NM_201647.3(STAMBP):c.112C>T (p.Arg38Cys) STAMBP Jun 14, 2015 MedGen:C3280296,OMIM:614261,Orphanet:ORPHA294016;MedGen:CN517202 Microcephaly-capillary malformation syndrome;not provided germline 2 73830968 AATGAAGACATTCCACCCCGTCGGTACTTCCGCTCTGGAGTTGAGATTATCCGAATGGCAT -1 481792 NM_015570.3(AUTS2):c.946C>T (p.Arg316Ter) AUTS2 Jun 27, 2017 MedGen:CN517202 not provided germline 7 70763073 ATACCCCAGCCGCAGACGGAGCCCCAACTCCGAGCTCCTTCTCCGGACCCTGACTTGGTGC 796065342 204573 NM_175629.2(DNMT3A):c.1204C>T (p.Gln402Ter) DNMT3A - MedGen:CN232350 Early T cell progenitor acute lymphoblastic leukemia somatic 2 25246695 GAGAGTGACACTGCCAAGGCCGTGGAGGTGCAGAACAAGCCCATGATTGAATGGGCCCTGG 863225440 214791 NM_025137.3(SPG11):c.592C>T (p.Gln198Ter) SPG11 Nov 10, 2015 MedGen:C4225253,OMIM:616668,Orphanet:ORPHA466775 Charcot-Marie-Tooth disease, axonal type 2X germline 15 44659154 CTCAACTGTTTCACACTTCCCTTGCCTGCACAGGCAGTGGACATGATTATTGACACGCAGC 794726841 187762 NM_001165963.1(SCN1A):c.3818C>T (p.Ala1273Val) SCN1A Apr 06, 2016 MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002;MedGen:CN517202 Severe myoclonic epilepsy in infancy;not provided de novo;germline 2 166012170 TCATTCTGGAAATGCTTCTAAAATGGGTGGCATATGGCTATCAAACATATTTCACCAATGC 137852354 25124 NM_000132.3(F8):c.6976C>T (p.Arg2326Ter) F8 May 30, 1985 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154837677 CTAGACCCACCGTTACTGACTCGCTACCTTCGAATTCACCCCCAGAGTTGGGTGCACCAGA 753432312 419010 NM_025139.5(ARMC9):c.1336C>T (p.Arg446Cys) ARMC9 Aug 16, 2017 MedGen:CN262509;MedGen:CN399089,OMIM:617622 ARMC9-related Joubert syndrome;JOUBERT SYNDROME 30 germline;maternal 2 231276637 TGTATTTACCGTAGGCTCTTTCTTCCCAGGCGCCCGCTGCAGACAGCGATGATTCAAGACG 45517414 58529 NM_000548.4(TSC2):c.5254C>T (p.Gln1752Ter) TSC2 Dec 20, 2016 MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000;MedGen:CN517202 Tuberous sclerosis syndrome;not provided germline 16 2088320 GCCCGGCTCCGCCACATCAAGCGGCTCCGCCAGCGGGTAGGGAATATGGGGCTCCCTCAGC 122445108 26781 NM_000489.4(ATRX):c.109C>T (p.Arg37Ter) ATRX Nov 06, 2014 MedGen:C1845055,OMIM:301040,Orphanet:ORPHA847;Human Phenotype Ontology:HP:0001249,MedGen:C1843367;MedGen:C4016452 ATR-X syndrome;Intellectual disability;Mental retardation-hypotonic facies syndrome, X-linked germline;maternal X 77717155 GAAGAATCTGAAGAAACAAGTTCTCCTCCACGACTTGCAATGAATCAAAACACAGGTAAAT 786204981 187628 NM_003159.2(CDKL5):c.2704C>T (p.Gln902Ter) CDKL5 May 15, 2014 MedGen:C2748910,Orphanet:ORPHA3095 Atypical Rett syndrome de novo X 18628578 GAACCCGCACCGAAGGGCAGGCCAGCCCTCCAGCTGCCAGGTCAGATGGATCCTGGTTGGC -1 443692 NM_005859.4(PURA):c.487C>T (p.Gln163Ter) PURA Sep 15, 2017 MedGen:CN517202 not provided germline 5 140114668 CGCAAGTACTACATGGATCTCAAGGAGAACCAGCGCGGCCGCTTCCTGCGCATCCGCCAGA 137852694 24019 NM_001079668.2(NKX2-1):c.745C>T (p.Gln249Ter) NKX2-1 Dec 01, 2005 MedGen:C0393584,OMIM:118700,SNOMED CT:230306001 Benign hereditary chorea germline 14 36517739 TTCCAGAACCACCGCTACAAAATGAAGCGCCAGGCCAAGGACAAGGCGGCGCAGCAGCAAC 121908457 20874 NM_006790.2(MYOT):c.164C>T (p.Ser55Phe) MYOT Mar 19, 2014 MedGen:C1834659,OMIM:159000,Orphanet:ORPHA266;MedGen:C1836607,OMIM:609200;Human Phenotype Ontology:HP:0009063,MedGen:C1836609;Human Phenotype Ontology:HP:0009073,MedGen:C1836156 Limb-girdle muscular dystrophy, type 1A;Myotilinopathy;Progressive distal muscle weakness;Progressive proximal muscle weakness germline;unknown 5 137870815 GCCAGTGTACAGAGCAAAGATTTTCTGCCTCCTCAACACTGAGCTCTCACATCACCATGTC 886041635 264023 NM_015215.3(CAMTA1):c.4231C>T (p.Arg1411Ter) CAMTA1 Mar 09, 2016 MedGen:CN517202 not provided germline 1 7744883 GCAGAACACATTATTGAAGCCACACCTGACCGAATCAAGCAGGAGAATTTTGTGCCCATGG 121918130 15439 NM_019892.5(INPP5E):c.1132C>T (p.Arg378Cys) INPP5E Sep 01, 2009 MedGen:CN119531,OMIM:213300 Joubert syndrome 1 germline 9 136433182 CACGGCGTGCTCTACATGTCGCTCTTCATCCGCAGGGACCTCATCTGGTTCTGCTCAGGTG 121965032 26964 NM_000203.4(IDUA):c.1091C>T (p.Thr364Met) IDUA Nov 15, 2016 MedGen:C0023786,Orphanet:ORPHA579;MedGen:C0086431,OMIM:607015,Orphanet:ORPHA93476,SNOMED CT:26745009 Mucopolysaccharidosis type I;Mucopolysaccharidosis, MPS-I-H/S germline 4 1002387 GCTACCACCCGCACCCCTTCGCGCAGCGCACGCTCACCGCGCGCTTCCAGGTCAACAACAC -1 459193 NM_000093.4(COL5A1):c.3805C>T (p.Gln1269Ter) COL5A1 Jul 18, 2017 MedGen:C0268335,OMIM:130000,Orphanet:ORPHA287,SNOMED CT:20766005,SNOMED CT:83470009 Ehlers-Danlos syndrome, classic type germline 9 134812665 CCCTCCGGAGCTCCAGGTGCTGATGGCCCACAAGGTCCCCCAGGTGGAATAGGAAACCCTG 864622774 222913 NM_000202.7(IDS):c.469C>T (p.Pro157Ser) IDS Jun 24, 2013 MedGen:C0026705,OMIM:309900,SNOMED CT:70737009 Mucopolysaccharidosis, MPS-II maternal X 149500987 GATGATTCTCCGTATAGCTGGTCTTTTCCACCTTATCATCCTTCCTCTGAGAAGTATGAAA 772174079 208809 NM_020461.3(TUBGCP6):c.2356C>T (p.Arg786Ter) TUBGCP6 May 29, 2015 MedGen:CN233046 Microcephaly and chorioretinopathy with or without mental retardation germline 22 50222507 CAGAAGGCACTGTGGAGAATCCAGAGGCACCGACTGGAGAGTGCACGGCTTCGTTTTCTCT 786205700 188292 NM_032957.4(RTEL1):c.1523C>T (p.Pro508Leu) RTEL1 May 01, 2015 MedGen:C4225346,OMIM:616373 Pulmonary fibrosis and/or bone marrow failure, telomere-related, 3 germline 20 63687740 CCCTCATCCTTACCAGCGGCACGCTGGCCCCGGTGTCCTCCTTTGCTCTGGAGATGCAGAT 869025395 224332 NM_004415.3(DSP):c.5851C>T (p.Arg1951Ter) DSP Jun 08, 2017 MedGen:C0349788,Orphanet:ORPHA247,SNOMED CT:253528005,SNOMED CT:281170005;MedGen:C1843896,OMIM:607450;MedGen:CN517202 Arrhythmogenic right ventricular cardiomyopathy;Arrhythmogenic right ventricular cardiomyopathy, type 8;not provided germline 6 7583113 AAACTCAGACAGCGCCCATATGGGTCCCATCGAGAGACCCAGACTGAGTGTGAGTGGACCG 121908853 21519 NM_001369.2(DNAH5):c.1828C>T (p.Gln610Ter) DNAH5 Feb 01, 2002 MedGen:C1837618,OMIM:608644 Ciliary dyskinesia, primary, 3 germline 5 13901476 ATTGATATGATTTCAAAGCTGTATACAAAGCAGAAATACGATCCTCCTCTGGCTCGAAACC 1057516028 353883 NM_004006.2(DMD):c.6139C>T (p.Gln2047Ter) DMD - Human Phenotype Ontology:HP:0003236,MedGen:C0241005,OMIM:123320 Creatine phosphokinase, elevated serum unknown X 32287680 ATATTACAGAATATAAAAGATAGTCTACAACAAAGCTCAGGTCGGATTGACATTATTCATA 180177083 132139 NM_024675.3(PALB2):c.196C>T (p.Gln66Ter) PALB2 Aug 15, 2017 MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Familial cancer of breast;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline;unknown 16 23637865 GATTGTTTGTCTCAGCAGGATCTCTCACCGCAGCTAAAACACTCAGGTAAATCTAGACCAT 121908881 21494 NM_000369.2(TSHR):c.1430C>T (p.Thr477Ile) TSHR Mar 01, 2000 MedGen:C3493776,OMIM:275200 Hypothyroidism, congenital, nongoitrous, 1 germline 14 81143488 TGCTCCTCATCGCCTCTGTAGACCTCTACACTCACTCTGAGTACTACAACCATGCCATCGA 797046139 209380 NM_002230.2(JUP):c.1615C>T (p.Gln539Ter) JUP May 01, 2011 MedGen:C1832600,OMIM:601214,Orphanet:ORPHA34217 Naxos disease germline 17 41758753 CAACTGCTGGTGAAGGCCCACCAGGATGCCCAGCGCCACGTAGCTGCAGGCACACAGCAGC 1060502414 399939 NM_000059.3(BRCA2):c.2590C>T (p.Gln864Ter) BRCA2 May 16, 2017 MedGen:C0677776,Orphanet:ORPHA145 Hereditary breast and ovarian cancer syndrome germline 13 32336945 AACACAAATCTAAGAGTAATCCAAAAAAATCAAGAAGAAACTACTTCAATTTCAAAAATAA -1 432330 NM_015272.4(RPGRIP1L):c.118C>T (p.Gln40Ter) RPGRIP1L Apr 20, 2017 MedGen:C1969053,OMIM:611560 Joubert syndrome 7 germline 16 53696263 ACTTCAACAACACGGACAATGAAGTCTCGCCAGGCAGTGTCACGTGTCAGTCGTGAGGAAC 201114717 76773 NM_000784.3(CYP27A1):c.379C>T (p.Arg127Trp) CYP27A1 Aug 01, 2013 MedGen:C0238052,OMIM:213700,Orphanet:ORPHA909,SNOMED CT:63246000 Cholestanol storage disease not provided 2 218809700 GTGATGCGGCAAGAGGGCAAGTACCCAGTACGGAACGACATGGAGCTATGGAAGGAGCACC 765086319 205295 NM_024306.4(FA2H):c.565C>T (p.Arg189Ter) FA2H Oct 02, 2013 MeSH:D030342,MedGen:C0950123 Inborn genetic diseases germline 16 74726273 CTGGTGCTGTATCTCAGCTGGTCCTACTACCGAACCTTTGCCCAGGGCAACGTCCGACTCT -1 481574 NM_018136.4(ASPM):c.9961C>T (p.Gln3321Ter) ASPM Jan 12, 2018 MedGen:CN517202 not provided germline 1 197089953 CCTTGTATGGAAGTCATCAGATATGCTGTGCAAGTCTTGCTTAATGTATCTAAGGTAGTTT 132630294 26131 NM_001128834.2(PLP1):c.509C>T (p.Ser170Phe) PLP1 Feb 17, 1998 MedGen:C1839264,OMIM:312920,Orphanet:ORPHA99015 Spastic paraplegia 2 germline X 103787853 CCGTTGTGTGGCTCCTGGTGTTTGCCTGCTCTGCTGTGCCTGTGTACATTTACTTCAACAC 1057520650 372254 NM_004572.3(PKP2):c.1147C>T (p.Gln383Ter) PKP2 May 04, 2015 MedGen:CN517202 not provided germline 12 32868950 GCAGCTACTTTCATACAGCACGAGTGCTTCCAGAAATCTGAAGCTCGGAAGAGGGTGAGTG 28936401 23288 NM_000020.2(ACVRL1):c.1120C>T (p.Arg374Trp) ACVRL1 Jul 24, 2017 MedGen:C1838163,OMIM:600376;MedGen:C1832529;MedGen:CN517202;MedGen:CN169374 Hereditary hemorrhagic telangiectasia type 2;Pulmonary arterial hypertension related to hereditary hemorrhagic telangiectasia;not provided;not specified germline 12 51916107 ATCGGCAACAACCCGAGAGTGGGCACCAAGCGGTACATGGCACCCGAGGTGCTGGACGAGC 876659354 466443 NM_024675.3(PALB2):c.1702C>T (p.Gln568Ter) PALB2 Feb 15, 2017 MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006 Familial cancer of breast germline 16 23630452 TTTTCTTCTTTAGGGAAGAAAAGTCGTCATCAAAAAGAGGATTCCCTTTCTTGGAGTAATA 121908592 28510 NM_002234.3(KCNA5):c.1727C>T (p.Ala576Val) KCNA5 May 01, 2009 MedGen:C2677106,OMIM:612240 Atrial fibrillation, familial, 7 germline 12 5045874 CTGGGGGGACCCTGGAGAATGCAGACAGTGCCCGAAGGGGCAGCTGCCCCCTAGAGAAGTG 119103267 17319 NM_014874.3(MFN2):c.2119C>T (p.Arg707Trp) MFN2 Aug 15, 2017 MedGen:C4310725,OMIM:617087;MedGen:CN043576;MedGen:C1836485,OMIM:609260,Orphanet:ORPHA99947;MedGen:CN517202 Charcot-Marie-Tooth disease, axonal, autosomal recessive, type 2A2B;Charcot-Marie-Tooth disease, type 2;Charcot-Marie-Tooth disease, type 2A2A;not provided germline 1 12009641 GCTCATCTGTGTCAGCAAGTTGACGTCACCCGGGAGAACCTGGAGCAGGAAATTGCCGCCA 113298164 29490 NM_000236.2(LIPC):c.1214C>T (p.Thr405Met) LIPC Aug 01, 2003 MedGen:C3151466,OMIM:614025,Orphanet:ORPHA140905 Hepatic lipase deficiency germline 15 58563549 CTAGTAATAAAACGTATTCCTTTCTTATCACGCTGGATGTGGATATCGGCGAGCTGATCAT 267606953 33461 NM_016341.3(PLCE1):c.6448C>T (p.Arg2150Ter) PLCE1 Jul 01, 2010 MedGen:C1853124,OMIM:610725 Nephrotic syndrome, type 3 germline 10 94322006 CAAGTGCATGATGTTTCTCCAGAGCAACCTCGAACAGTCATCAAAGCACCCCGCGTCAGCA 28937598 20719 NM_001169109.1(SCO2):c.511C>T (p.Arg171Trp) SCO2 Mar 22, 2000 MedGen:C1858424,OMIM:604377,Orphanet:ORPHA1561 Cardioencephalomyopathy, fatal infantile, due to cytochrome c oxidase deficiency germline 22 50523901 CAGCCTGTCTTCATCACTGTGGACCCCGAGCGGGACGACGTTGAAGCCATGGCCCGCTACG 121912569 23606 NM_000901.4(NR3C2):c.2839C>T (p.Arg947Ter) NR3C2 Sep 01, 2006 MedGen:C1449842,OMIM:177735,Orphanet:ORPHA171871 Pseudohypoaldosteronism type 1 autosomal dominant germline 4 148081460 GACCTGCTGGAATTCTGCTTCTACACCTTCCGAGAGTCCCATGCGCTGAAGGTAGAGTTCC 387906930 39513 NM_006005.3(WFS1):c.2051C>T (p.Ala684Val) WFS1 Oct 13, 2017 MedGen:C0043207,OMIM:222300,Orphanet:ORPHA3463,SNOMED CT:70694009;MedGen:C1857286,OMIM:614296,Orphanet:ORPHA411590;MedGen:CN517202 Diabetes mellitus AND insipidus with optic atrophy AND deafness;Wolfram-like syndrome, autosomal dominant;not provided de novo;germline;unknown 4 6301846 GGCCACGCGCCTGGAAGGAGACCAACATGGCGCGCACCCAGATCCTCTGCAGCCACCTGGA 61752103 22813 NM_000286.2(PEX12):c.538C>T (p.Arg180Ter) PEX12 Oct 25, 2012 MedGen:C3551381;MedGen:C3553929,OMIM:614859 Peroxisomal biogenesis disorder 3b;Peroxisome biogenesis disorder 3A germline 17 35577180 TGGGAAGGATGGTTTCTTGTACAACAACTTCGATACATCCTAGGAAAAGCTCAGCATCACT 28942094 18456 NM_006147.3(IRF6):c.16C>T (p.Arg6Cys) IRF6 Jul 13, 2016 Human Phenotype Ontology:HP:0000175,MedGen:C2240378;MedGen:C0175697,OMIM:119300,SNOMED CT:79261008;MedGen:CN517202 Cleft palate;Van der Woude syndrome;not provided germline;unknown 1 209801398 TGACCCCCCCAGATCATGGCCCTCCACCCCCGCAGAGTCCGGCTAAAGCCCTGGCTGGTGG -1 444291 NM_017780.3(CHD7):c.760C>T (p.Gln254Ter) CHD7 Jul 03, 2017 MedGen:CN517202 not provided germline 8 60742192 AGCATGGCACCTTCCTTGCGTCACTCGGTGCAGCAGTTCCATCACCACCCCTCTACTGCTC -1 445963 NM_030632.2(ASXL3):c.4399C>T (p.Arg1467Ter) ASXL3 Oct 09, 2017 MedGen:CN517202 not provided germline 18 33744247 CCAGGGGGCTTTGCACCAGCAGCCATAAACCGATCAATTCCGTGTAAAGTCATCGTTGACC 121918457 28370 NM_002834.4(PTPN11):c.1403C>T (p.Thr468Met) PTPN11 Jul 19, 2017 MedGen:CN230736;Human Phenotype Ontology:HP:0012209,MedGen:C0349639,OMIM:607785,Orphanet:ORPHA86834;MedGen:CN074218,OMIM:151100;MedGen:CN074218,OMIM:151100;MedGen:C0410530,OMIM:156250,Orphanet:ORPHA2499,SNOMED CT:205481009;MeSH:D009634,MedGen:C0028326,Orphanet:ORPHA648,SNOMED CT:205824006;MedGen:C0041409,OMIM:163950;MedGen:C0041409,OMIM:163950;MedGen:C0175704,Orphanet:ORPHA500;MedGen:CN166718,Orphanet:ORPHA98733;MedGen:CN517202;MedGen:CN169374 Cardiovascular phenotype;Juvenile myelomonocytic leukemia;LEOPARD syndrome 1;LEOPARD syndrome 1;Metachondromatosis;Noonan syndrome;Noonan syndrome 1;Noonan syndrome 1;Noonan syndrome with multiple lentigines;Rasopathy;not provided;not specified germline;unknown 12 112488466 CCCGCAGTGCTGGAATTGGCCGGACAGGGACGTTCATTGTGATTGATATTCTTATTGACAT 121908382 20337 NM_001128425.1(MUTYH):c.1213C>T (p.Pro405Ser) MUTYH Oct 11, 2011 Human Phenotype Ontology:HP:0006753,MeSH:D013274,MedGen:C0038356,OMIM:613659,SNOMED CT:126824007 Neoplasm of stomach somatic 1 45331530 TCAGGTCTGCTGGCAGGACTGTGGGAGTTCCCGTCCGTGACCTGGGAGCCCTCAGAGCAGC 137852513 25043 NM_000216.3(ANOS1):c.769C>T (p.Arg257Ter) ANOS1 Sep 01, 1992 MedGen:C1563719,OMIM:308700 Kallmann syndrome 1 germline X 8585354 CGAGTTCAACTGACTGACATAAGACCCAGCCGATGGTACCAGTTTCGAGTGGCTGCTGTGA 397516291 52337 NM_000260.3(MYO7A):c.1963C>T (p.Gln655Ter) MYO7A Jan 27, 2012 MedGen:C1568247,OMIM:276900,Orphanet:ORPHA231169 Usher syndrome, type 1 germline 11 77174783 CAGCTGTTCGACCGGCACCTGTGCGTGCGCCAGCTGCGGTACTCAGGAATGATGGAGACCA 121917923 187846 NM_001165963.1(SCN1A):c.1072C>T (p.Pro358Ser) SCN1A Dec 20, 2014 MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002 Severe myoclonic epilepsy in infancy de novo 2 166047725 GGATATATGTGTGTGAAAGCTGGTAGAAATCCCAATTATGGCTACACAAGCTTTGATACCT 864321657 217224 NM_001080517.2(SETD5):c.2302C>T (p.Arg768Ter) SETD5 Nov 10, 2012 MedGen:C3810406,OMIM:615761,Orphanet:ORPHA404440 Mental retardation, autosomal dominant 23 germline 3 9448586 TTTGGCTCACCCTTTATCCCTGAGAGACGTCGAAGGCCCCTTCTGCCTGATGGCACATTCA 757499322 439489 NM_153223.3(CEP120):c.451C>T (p.Arg151Ter) CEP120 Nov 06, 2017 MedGen:C4225378,OMIM:616300 Short-rib thoracic dysplasia 13 with or without polydactyly germline 5 123412411 GATAGCTTTAAAGCAAAGGGGGCTCCCCCTCGAGATGGAAAAGGTTTGTGCATCATCTCTA 398122826 48280 NM_001164232.1(DDHD2):c.859C>T (p.Arg287Ter) DDHD2 Jan 31, 2014 MedGen:C3539495,OMIM:615033,Orphanet:ORPHA320380 Spastic paraplegia 54, autosomal recessive germline 8 38245752 ATTATTTTTCCTTTTTTCAGAGATCTGCAGCGAATAACCCTGCCCAGCATTAACCGCCTCA 121908848 21588 NM_003722.4(TP63):c.289C>T (p.Arg97Cys) TP63 Apr 01, 2005 MedGen:C1854442,OMIM:605289 Split-hand/foot malformation 4 germline 3 189738739 AACAAGATTGAGATTAGCATGGACTGTATCCGCATGCAGGACTCGGACCTGAGTGACCCCA 104894581 23963 NM_000891.2(KCNJ2):c.557C>T (p.Pro186Leu) KCNJ2 Aug 01, 2002 MedGen:C1563715,OMIM:170390,Orphanet:ORPHA37553,SNOMED CT:422348008;MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000 Andersen Tawil syndrome;Congenital long QT syndrome germline 17 70175596 TTGGCGCAGTCATGGCCAAGATGGCAAAGCCAAAGAAGAGAAACGAGACTCTTGTCTTCAG 80338853 21822 NM_001360.2(DHCR7):c.278C>T (p.Thr93Met) DHCR7 Jun 09, 2017 Human Phenotype Ontology:HP:0012443,MedGen:C4021085;MedGen:C0175694,OMIM:270400,Orphanet:ORPHA818,SNOMED CT:43929004;MedGen:CN517202 Abnormality of brain morphology;Smith-Lemli-Opitz syndrome;not provided germline;inherited;unknown 11 71444036 CGGACATCTGGGCCAAGACTCCACCTATAACGAGGAAAGCCGCCCAGCTCTATACCTTGTG 727502869 172316 NM_004130.3(GYG1):c.970C>T (p.Arg324Ter) GYG1 Dec 01, 2014 MedGen:C4015452,OMIM:616199,Orphanet:ORPHA456369 Polyglucosan body myopathy 2 germline 3 149026850 CCGTTTGTATCCTCGGAAGAACGGAAGGAACGATGGGAACAGGGCCAGGCTGATTATATGG 63750934 96714 NM_000251.2(MSH2):c.892C>T (p.Gln298Ter) MSH2 Sep 11, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Lynch syndrome;not provided germline 2 47414368 CAGTTTGAACTGACTACTTTTGACTTCAGCCAGTATATGAAATTGGATATTGCAGCAGTCA 121964878 27283 NM_004360.4(CDH1):c.1901C>T (p.Ala634Val) CDH1 Jan 24, 2017 MedGen:C1708349,OMIM:137215,Orphanet:ORPHA26106 Hereditary diffuse gastric cancer germline 16 68822190 CTCCCTTCACAGCAGAACTAACACACGGGGCGAGTGCCAACTGGACCATTCAGTACAACGA 886037767 217264 NM_198173.2(GRHL3):c.738C>T (p.Gly246=) GRHL3 Dec 01, 2015 MedGen:CN234898 nonsyndromic cleft palate de novo 1 24337687 CTCCCCCAAAGCCATCCACATCAAGTCAGGCGAGTCACCCATGGCCTACCTCAACAAAGGC 199422225 29271 NM_005006.6(NDUFS1):c.721C>T (p.Arg241Trp) NDUFS1 Jun 01, 2001 MedGen:C1838979,OMIM:252010 Mitochondrial complex I deficiency germline 2 206146919 CTAACCTCTAAGCCCTATGCCTTTACTGCCCGGCCTTGGGAAACAAGGTATCTTTTATTTT 387907269 45732 NM_152424.3(AMER1):c.811C>T (p.Gln271Ter) AMER1 Sep 07, 2012 MedGen:C0432268,OMIM:300373,Orphanet:ORPHA2780,SNOMED CT:254129003 Osteopathia striata with cranial sclerosis germline X 64192476 CCCATGGAGGCCTGTGCCTCAGCACATGTGCAACCCAAGCCTGCCCCTGAAGCCAGTAGCC 137852248 25626 NM_000133.3(F9):c.880C>T (p.Arg294Ter) F9 Apr 01, 1989 MedGen:C0008533,OMIM:306900,Orphanet:ORPHA98879,SNOMED CT:41788008 Hereditary factor IX deficiency disease germline X 139561565 ATTGAGGAGACAGAACATACAGAGCAAAAGCGAAATGTGATTCGAATTATTCCTCACCACA -1 482220 NM_004928.2(C21orf2):c.355C>T (p.Gln119Ter) C21orf2 Jan 24, 2018 MedGen:CN517202 not provided germline 21 44333051 ATGACCGTGCTGCGCACCCTGCCGCGCCTACAGAAGCTGGACAACCAGGGTAGGTGGCCGC 137852374 25186 NM_000132.3(F8):c.6955C>T (p.Pro2319Ser) F8 Aug 01, 1991 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154837698 TTCACACCTGTGGTGAACTCTCTAGACCCACCGTTACTGACTCGCTACCTTCGAATTCACC 387906890 39385 NM_001199397.1(NEK1):c.379C>T (p.Arg127Ter) NEK1 Apr 01, 2012 MedGen:C0024507,OMIM:263520,SNOMED CT:72922008 Short rib-polydactyly syndrome, Majewski type germline 4 169590743 AAACATGTACATGATAGAAAAATTCTTCATCGAGACATTAAATCTCAGGTATGTTATTCTG 118203728 58154 NM_000368.4(TSC1):c.2692C>T (p.Gln898Ter) TSC1 Mar 04, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1854465,OMIM:191100;MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000 Hereditary cancer-predisposing syndrome;Tuberous sclerosis 1;Tuberous sclerosis syndrome germline 9 132897544 CTAGAAAAAAACAGAAGCCATGTTCTCCAGCAGACTCAGAGGCTTGATACCTCCCAAAAAC 587777075 102585 NM_003327.3(TNFRSF4):c.193C>T (p.Arg65Cys) TNFRSF4 Aug 26, 2013 MedGen:C3810053,OMIM:615593,Orphanet:ORPHA431149 Immunodeficiency 16 germline 1 1213738 CGCTGCAGCCGCTCCCAGAACACGGTGTGCCGTCCGTGCGGGCCGGGCTTCTACAACGACG 28934607 16700 NM_000785.3(CYP27B1):c.1144C>T (p.Pro382Ser) CYP27B1 Mar 05, 1998 MedGen:C0268689,OMIM:264700,Orphanet:ORPHA289157,SNOMED CT:67049004 Vitamin D-dependent rickets, type 1 germline 12 57764169 CCATTTTGTGCTTTGCAACCTAGACTGTACCCTGTGGTACCTGGAAATTCTCGTGTCCCAG 121909219 22852 NM_000314.6(PTEN):c.697C>T (p.Arg233Ter) PTEN Oct 17, 2017 MedGen:C0265326,OMIM:153480,Orphanet:ORPHA109;MeSH:D015179,MedGen:CN236642;MedGen:CN072330,OMIM:158350;Human Phenotype Ontology:HP:0100843,MeSH:D005909,MedGen:C0017636,SNOMED CT:63634009;MedGen:C0027672,SNOMED CT:699346009;MedGen:C1854416,OMIM:605309,Orphanet:ORPHA210548;Human Phenotype Ontology:HP:0100013,MeSH:D001943,MedGen:C1458155,Orphanet:ORPHA180250,SNOMED CT:126926005;Human Phenotype Ontology:HP:0030358,MeSH:D002289,MedGen:C0007131,SNOMED CT:254637007;MedGen:C1959582,OMIM:601728,Orphanet:ORPHA306498;MedGen:CN517202;MedGen:CN169374 Bannayan-Riley-Ruvalcaba syndrome;Colorectal Neoplasms;Cowden syndrome 1;Glioblastoma;Hereditary cancer-predisposing syndrome;Macrocephaly/autism syndrome;Neoplasm of the breast;Non-small cell lung cancer;PTEN hamartoma tumor syndrome;not provided;not specified germline;somatic;unknown 10 87957915 AAGATATATTCCTCCAATTCAGGACCCACACGACGGGAAGACAAGTTCATGTACTTTGAGT 1060501464 394820 NM_001369.2(DNAH5):c.11725C>T (p.Arg3909Ter) DNAH5 Oct 30, 2016 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244 Ciliary dyskinesia germline 5 13735167 CTTACCCTAAAGATTGACATCCAGAGGAACCGAGTCAAGCATGAAGAGTTTCTCACTCTTA 587777081 102931 NM_015662.2(IFT172):c.2716C>T (p.Gln906Ter) IFT172 Feb 10, 2014 MedGen:C4017084 Short-rib thoracic dysplasia 10 without polydactyly germline 2 27459449 TGGAAGAAGGCAATTTATATATTAGATCTACAGGACCGGAACACTGCATCCAAATACTATC 121912624 18621 NM_017662.4(TRPM6):c.166C>T (p.Arg56Ter) TRPM6 Jun 01, 2002 MedGen:C1865974,OMIM:602014,Orphanet:ORPHA30924 Hypomagnesemia 1, intestinal germline 9 74842330 TTGGTCTTGAATTTAAGGTGTTACTGTGGCCGACTGATTGGAGACCATGCTGGGATAGATT 387906782 39090 NM_053025.3(MYLK):c.4438C>T (p.Arg1480Ter) MYLK Nov 12, 2010 MedGen:C3151077,OMIM:613780 Aortic aneurysm, familial thoracic 7 germline 3 123647405 ATTTGCAGTGGGAAATTTGGACAGGTCTTTCGACTTGTAGAAAAGAAAACTCGAAAAGTCT 63750077 31046 NM_002087.3(GRN):c.373C>T (p.Gln125Ter) GRN Aug 24, 2006 MedGen:C1843792,OMIM:607485;MedGen:CN517202 Frontotemporal dementia, ubiquitin-positive;not provided germline 17 44350251 TCCACAGGTAACAACTCCGTGGGTGCCATCCAGTGCCCTGATAGTCAGTTCGAATGCCCGG 121909489 22044 NM_002316.3(LMX1B):c.244C>T (p.Gln82Ter) LMX1B Jul 01, 1998 MedGen:C0027341,OMIM:161200,SNOMED CT:22199006 Nail-patella syndrome germline 9 126615487 AACGAGTCGTCCTGGCACGAGGAGTGTTTGCAGTGCGCGGCGTGTCAGCAAGCCCTCACCA -1 455114 NM_001369.2(DNAH5):c.5482C>T (p.Gln1828Ter) DNAH5 Apr 04, 2017 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244 Ciliary dyskinesia germline 5 13841694 CTAACTGAATTTCTTTCATCCTTCCCTGCTCAGGTCAGTGTATTGAAATTTGAAAGTATGT 121908087 19090 NM_000547.5(TPO):c.2077C>T (p.Arg693Trp) TPO Jul 01, 2003 MedGen:C1291299,OMIM:274500,SNOMED CT:124204003 Deficiency of iodide peroxidase germline 2 1496059 AGGCGTGAGCTGGAGAAGCACTCCCTGTCTCGGGTCATCTGTGACAACACTGGCCTCACCA 886039416 259997 NM_130799.2(MEN1):c.772C>T (p.Gln258Ter) MEN1 Jul 12, 2016 MedGen:CN517202 not provided germline 11 64807563 GACCTGCACACCGACTCGCTGGAGCTTCTGCAGCTGCAGCAGGTGAGGGCTGAGCCAATGG 766313615 397205 NM_000264.4(PTCH1):c.2308C>T (p.Arg770Ter) PTCH1 Jul 10, 2016 MedGen:C0004779,OMIM:109400,Orphanet:ORPHA377,SNOMED CT:69408002;MedGen:C0027672,SNOMED CT:699346009 Gorlin syndrome;Hereditary cancer-predisposing syndrome germline 9 95467368 TTGCTGGGGGTCAGCCTTTATGGCACCACCCGAGTGAGAGACGGGCTGGACCTTACGGACA 121918405 31294 NM_016725.2(FOLR1):c.352C>T (p.Gln118Ter) FOLR1 Aug 04, 2016 MedGen:C2751584,OMIM:613068,Orphanet:ORPHA217382 Cerebral folate deficiency germline 11 72195454 GAGTGCTCCCCCAACTTGGGGCCCTGGATCCAGCAGGTATGCATGGCTTCCTGCAGGTACA 120074156 17848 NM_025074.6(FRAS1):c.8602C>T (p.Gln2868Ter) FRAS1 Jun 01, 2003 MedGen:C0265233,OMIM:219000,SNOMED CT:204102004 Cryptophthalmos syndrome germline 4 78481962 AAGGTGGAATTTGGGCCTGGTGTCATTGAACAGGTGCGTTTACAGCAGTCGAGACTCCACA 863225011 213850 NM_004006.2(DMD):c.8038C>T (p.Arg2680Ter) DMD May 30, 2017 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Becker muscular dystrophy;Duchenne muscular dystrophy germline X 31627852 GAACATTTGGTCCTTTGCAGGGTGAGTGAGCGAGAGGCTGCTTTGGAAGAAACTCATAGAT 137854552 15382 NM_000267.3(NF1):c.5839C>T (p.Arg1947Ter) NF1 Aug 10, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Neurofibromatosis, type 1;not provided germline;inherited 17 31334927 CGTTTTTGCAAGCATAATGATGATGCCAAACGACAAAGAGTTACTGCTATTCTTGACAAGC 886039777 247328 NM_138927.2(SON):c.286C>T (p.Gln96Ter) SON Nov 02, 2016 Human Phenotype Ontology:HP:0001508,MedGen:C0231246;Human Phenotype Ontology:HP:0001263,MedGen:C4020875;MedGen:C4310696,OMIM:617140 Failure to thrive;Global developmental delay;ZTTK syndrome de novo;germline 21 33549517 GGCTCCAGAAAAAGTAGATGCGTATCTGTACAAACAGATCCTACTGATGAAATTCCCACTA 80356655 31173 NM_000162.3(GCK):c.683C>T (p.Thr228Met) GCK Jun 12, 2017 MedGen:C1841962,OMIM:125851;MedGen:C1833104,OMIM:606176,Orphanet:ORPHA99885;MedGen:CN517202 Maturity-onset diabetes of the young, type 2;Permanent neonatal diabetes mellitus;not provided germline 7 44147830 TGACAGTCCCCCCGACCTCCACCCCAGGCACGGGCTGCAATGCCTGCTACATGGAGGAGAT 372844636 36365 NM_000060.4(BTD):c.631C>T (p.Arg211Cys) BTD Apr 21, 2017 MedGen:C0220754,OMIM:253260,Orphanet:ORPHA79241,SNOMED CT:8808004;MedGen:CN517202 Biotinidase deficiency;not provided germline 3 15644487 AGCAATAATGGAACCCTTGTTGACCGCTACCGTAAACACAACCTCTACTTTGAGGCAGCAT 121918202 16112 NM_001127897.3(RPGRIP1L):c.1033C>T (p.Gln345Ter) RPGRIP1L Jul 01, 2007 MedGen:C1969052,OMIM:611561 Meckel syndrome type 5 germline 16 53671580 TAATATGTAATTTTATTTTCATTTTAGCTGCAGGATAGAATTAATGATTTAGAAAAGGAAC 398123832 100328 NM_004006.2(DMD):c.10171C>T (p.Arg3391Ter) DMD Feb 02, 2017 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009;MedGen:C3668940,OMIM:302045;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001;MedGen:CN517202 Becker muscular dystrophy;Dilated cardiomyopathy 3B;Duchenne muscular dystrophy;not provided germline X 31178721 CGAACCAAAAGGTATTTTGCGAAGCATCCCCGAATGGGCTACCTGCCAGTGCAGACTGTCT 121917875 17629 NM_198586.2(NHLRC1):c.793C>T (p.Arg265Ter) NHLRC1 Mar 22, 2005 MedGen:C1850764 Epilepsy, progressive myoclonic 2b germline 6 18121814 GAAAGGTTGCAAGCTCATCTGTGCAATCCCCGAGGGGTGGCAGTGTCTTGGCTCACCGGGG 879253939 244198 NM_014874.3(MFN2):c.1198C>T (p.Arg400Ter) MFN2 Jan 31, 2017 MedGen:CN517202 not provided germline 1 12004029 TGCGAGGAAATGCGTGAAGAGCGGCAAGACCGACTGAAATTTATTGACAAACAGCTGGAGC 1060503583 400557 NM_177438.2(DICER1):c.5494C>T (p.Gln1832Ter) DICER1 Jul 30, 2017 MedGen:CN072455,OMIM:601200 DICER1-related pleuropulmonary blastoma cancer predisposition syndrome germline 14 95091236 GATAGTGGGATGTCACTGGAGACAGTCTGGCAGGTGTACTATCCCATGATGCGGCCACTAA 119477056 19679 NM_198196.2(CD96):c.839C>T (p.Thr280Met) CD96 Oct 01, 2007 MedGen:C0796095,OMIM:211750,Orphanet:ORPHA1308 C syndrome germline 3 111585362 AAATCCCTGTGATTGTGGAAAATAACTCCACGGATGTCTTGGTAGAGGTGAGTCACATAAA 128626249 26297 NM_004006.2(DMD):c.5899C>T (p.Arg1967Ter) DMD Apr 08, 2016 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009;MedGen:C3668940,OMIM:302045;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Becker muscular dystrophy;Dilated cardiomyopathy 3B;Duchenne muscular dystrophy germline X 32342123 CGGGAAATTGAGAGCAAATTTGCTCAGTTTCGAAGACTCAACTTTGCACAAATTGTGAGTT 863225005 213857 NM_004006.2(DMD):c.5917C>T (p.Gln1973Ter) DMD Jun 30, 2012 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Duchenne muscular dystrophy germline X 32342105 TTTGCTCAGTTTCGAAGACTCAACTTTGCACAAATTGTGAGTTGTTACTGGCAAACCCACG 878854365 226483 NM_000540.2(RYR1):c.2029C>T (p.Gln677Ter) RYR1 May 26, 2017 MedGen:C0751951,OMIM:117000,Orphanet:ORPHA597,SNOMED CT:43152001;MedGen:CN239331 Central core disease;RYR1-Related Disorders germline;unknown 19 38458154 GTGGACGAGGTGACTCCATTTCTGACAGCTCAGGCCACCCACTTGCGGGTGGGCTGGGCCC -1 427249 NM_000038.5(APC):c.706C>T (p.Gln236Ter) APC Nov 05, 2012 MedGen:CN240755 Familial adenomatous polyposis germline 5 112792506 AAGGACATACTTCGTATACGACAGCTTTTACAGTCCCAAGCAACAGAAGCAGAGGTTAGTA 587776411 153691 NM_024675.3(PALB2):c.1108C>T (p.Gln370Ter) PALB2 Dec 05, 2016 MedGen:CN517202 not provided germline 16 23635438 GACACTCTTGATGGCAGGAATGAAAATCTTCAGGAAAGTGAGATTCTAAGTCAACCTAAGA -1 476064 NM_005591.3(MRE11):c.1771C>T (p.Gln591Ter) MRE11 Feb 29, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 11 94447231 GGGCAGAATTCAGCATCGAGAGGAGGGTCTCAAAGAGGAAGAGGTGAGCACTGAGTTCAGT 1060499791 389233 NM_001171932.1(CDH23):c.1036C>T (p.Pro346Ser) CDH23 Jul 01, 2017 MedGen:C1832394,OMIM:601386 Deafness, autosomal recessive 12 germline 10 71617295 ATCCTGGTTATTGACATCAATGACAATGCCCCGGAGTTCAACAGCTCCGAGTACAGCGTGG 886041678 264300 NM_017890.4(VPS13B):c.8254C>T (p.Gln2752Ter) VPS13B Apr 06, 2016 MedGen:CN517202 not provided germline 8 99817621 GAACTAAAAGTCGTTCAGCATTACATTGGTCAAGATGGACAAGCTGTAGTTCGGGAACATT 794726912 190436 NM_004260.3(RECQL4):c.82C>T (p.Gln28Ter) RECQL4 Sep 03, 2014 MedGen:C0032339,OMIM:268400,Orphanet:ORPHA2909,SNOMED CT:69093006 Rothmund-Thomson syndrome germline 8 144517703 TTCCGACGGCAGCGCGGGCGGCGACCGAGCCAGGTGCGGGCTGCCCAGGGGCCGAGGGGCT 606231300 167930 NM_003051.3(SLC16A1):c.586C>T (p.Arg196Ter) SLC16A1 Nov 13, 2014 MedGen:C4016684 Monocarboxylate transporter 1 deficiency, autosomal dominant germline 1 112917820 CTAAACTGCTGTGTTGCTGGAGCCCTCATGCGACCAATCGGGCCCAAGCCAACCAAGGCAG 199422234 24811 NM_004187.3(KDM5C):c.2191C>T (p.Leu731Phe) KDM5C Feb 01, 2005 MedGen:C1845243,OMIM:300534,Orphanet:ORPHA85279 Mental retardation, syndromic, Claes-Jensen type, X-linked germline X 53199029 TGCTACGACTGCCCAGACGGCCTTGTCTGCCTTTCCCACATCAATGATCTCTGCAAGTGCT 730880452 179869 NM_000169.2(GLA):c.847C>T (p.Gln283Ter) GLA Mar 06, 2017 Human Phenotype Ontology:HP:0001071,MedGen:C0002986,OMIM:301500,Orphanet:ORPHA324,SNOMED CT:16652001;MedGen:CN517202 Fabry disease;not provided germline X 101398522 TTTGGCCTCAGCTGGAATCAGCAAGTAACTCAGATGGCCCTCTGGGCTATCATGGCTGCTC 1085307160 414087 NM_001204.6(BMPR2):c.82C>T (p.Q28*) BMPR2 - MedGen:C0152171,OMIM:178600,SNOMED CT:26174007 Primary pulmonary hypertension germline 2 202464814 CATTCCTTTATTTCCTTTATTTTAGCTTCGCAGAATCAAGAACGGCTATGTGCGTTTAAAG 1114167403 413971 NM_000088.3(COL1A1):c.4292C>T (p.Thr1431Ile) COL1A1 - MedGen:C0268363,OMIM:166220,Orphanet:ORPHA216820,SNOMED CT:205497004 Osteogenesis imperfecta with normal sclerae, dominant form unknown 17 50185605 CCTGGGGCAAGACAGTGATTGAATACAAAACCACCAAGACCTCCCGCCTGCCCATCATCGA 374290942 264358 NM_006766.4(KAT6A):c.3553C>T (p.Gln1185Ter) KAT6A Mar 29, 2016 MedGen:CN517202 not provided germline 8 41934667 TTGAGTCGGGAAATCATGCCAGTTTCTACTCAAGCATGCGTCATTGAGCCCATCGTTTCCA 80338926 34542 NM_024577.3(SH3TC2):c.1972C>T (p.Arg658Cys) SH3TC2 Apr 10, 2017 MedGen:C1866636,OMIM:601596,Orphanet:ORPHA99949;MedGen:CN517202 Charcot-Marie-Tooth disease, type 4C;not provided germline 5 149027760 CGGCACGAGGAGGTCCTGCCCTTTGCCGAGCGCCTGCAGCTCCTCTCTGGACACCCTCCTG 104894761 25893 NM_000054.4(AVPR2):c.409C>T (p.Arg137Cys) AVPR2 May 05, 2005 MedGen:C1845202,OMIM:300539,Orphanet:ORPHA93606 Nephrogenic syndrome of inappropriate antidiuresis germline X 153905915 TCCTACATGATCCTGGCCATGACGCTGGACCGCCACCGTGCCATCTGCCGTCCCATGCTGG 558699420 247672 NM_144997.5(FLCN):c.634C>T (p.Gln212Ter) FLCN Jul 18, 2016 MedGen:C0346010,OMIM:135150,Orphanet:ORPHA122,SNOMED CT:110985001 Multiple fibrofolliculomas germline 17 17222646 CCCTTTGCATTTCAGGTGTTTGAGGCAGAGCAGTTTGGATGCCCACAGCGTGCTCAGAGGA 104894339 32883 NM_000486.5(AQP2):c.785C>T (p.Pro262Leu) AQP2 Dec 15, 2004 MedGen:C4015884 Diabetes insipidus, nephrogenic, autosomal recessive germline 12 49955577 GACGGCGGCAGTCGGTGGAGCTGCACTCGCCGCAGAGCCTGCCACGGGGTACCAAGGCCTG 879255593 227007 NM_130837.2(OPA1):c.2635C>T (p.Arg879Ter) OPA1 Aug 18, 2016 MedGen:C0221061,OMIM:210000,Orphanet:ORPHA1239,SNOMED CT:66988006 Abortive cerebellar ataxia germline 3 193662936 ATAACCACAGTCCGGAAGAACCTTGAATCCCGAGGAGTAGAAGTAGATCCAAGCTTGGTAA 113994174 47515 NM_001079.3(ZAP70):c.1393C>T (p.Arg465Cys) ZAP70 Mar 01, 2012 MedGen:C1849236,OMIM:269840 Severe combined immunodeficiency, atypical not provided 2 97737576 AAGAACTTTGTGCACCGTGACCTGGCGGCCCGCAACGTCCTGCTGGTTAACCGGCACTACG 769853984 482021 NM_005430.3(WNT1):c.364C>T (p.Arg122Ter) WNT1 Dec 12, 2017 MedGen:CN517202 not provided germline 12 48980429 TGATCCCCGCTCCCTTCTCCCACAGGCTGTCGAGAAACGGCGTTTATCTTCGCTATCACCT 137852709 23877 NM_000336.2(SCNN1B):c.800C>T (p.Pro267Leu) SCNN1B Nov 15, 2005 MedGen:C2749757,OMIM:211400 Bronchiectasis with or without elevated sweat chloride 1 germline 16 23367879 CTTTTAGGAACTTCACGTCCATCTTCTACCCTCACTATGGCAACTGTTACATCTTCAACTG 397514531 48142 NM_001139.2(ALOX12B):c.1207C>T (p.His403Tyr) ALOX12B Jan 18, 2013 MedGen:C1855792,OMIM:242100 Autosomal recessive congenital ichthyosis 2 germline 17 8077058 CACGAGGCCATCGCCCACCTGCTGGAGACACACCTCATTGCTGAGGCCTTCTGCCTGGCCT 121912885 32423 NM_001844.4(COL2A1):c.1999C>T (p.Leu667Phe) COL2A1 Sep 11, 2014 MedGen:C2020284,OMIM:108300;MedGen:C1836080,OMIM:609508 Stickler syndrome type 1;Stickler syndrome, type I, nonsyndromic ocular germline 12 47983435 GCTAACGCTTGTCACTTCGGCTTCTAGGGACTTCCTGGCCCTCCTGGTCCCCCAGGTGAAG 74315501 18332 NM_000268.3(NF2):c.1219C>T (p.Gln407Ter) NF2 Aug 01, 1994 MedGen:C0027832,OMIM:101000,Orphanet:ORPHA637,SNOMED CT:92503002 Neurofibromatosis, type 2 germline 22 29673365 CTTCTGGCCCAGAAGGCCGCAGAGGCTGAGCAGGAAATGCAGCGCATCAAGGCCACAGCGA 201097695 214344 NM_001244189.1(KIAA0586):c.802C>T (p.Gln268Ter) KIAA0586 Sep 01, 2015 MedGen:C4084822,OMIM:616490 Joubert syndrome 23 unknown 14 58444011 AATTCTGTTACAGAATTACTTAGTAAATTACAGGAGACTGATAAACACCTGCAACGTGTTA 387907025 39786 NM_018238.3(AGK):c.841C>T (p.Arg281Ter) AGK Mar 13, 2017 MedGen:C1859317,OMIM:212350,Orphanet:ORPHA1369;MedGen:CN517202 Cataract and cardiomyopathy;not provided germline 7 141641362 CAAAGGCCTTCTTTGTACAGGAGAATATTACGAAGGCTTGCGTCCTACTGGGCACAACCAC 72664289 426794 NM_001171.5(ABCC6):c.4305C>T (p.Gly1435=) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16150676 GGACGAGGCTACTGCTGCCGTGGACCCTGGCACGGAGCTGCAGATGCAGGCCATGCTCGGG 118204014 16662 NM_000018.3(ACADVL):c.1837C>T (p.Arg613Trp) ACADVL Jun 27, 2017 MedGen:C3887523,OMIM:201475,Orphanet:ORPHA26793,SNOMED CT:237996001,SNOMED CT:237997005;MedGen:CN517202;MedGen:CN169374 Very long chain acyl-CoA dehydrogenase deficiency;not provided;not specified germline;unknown 17 7224966 CCCCTCCTTCCCTCTCCCCAGGCTGCAGCTCGGATCCGAGAGGGCATGGCCGCCCTGCAGT 72554649 26823 NM_000052.6(ATP7A):c.2938C>T (p.Arg980Ter) ATP7A Feb 08, 2013 MedGen:C0022716,OMIM:309400,Orphanet:ORPHA565,SNOMED CT:59178007 Menkes kinky-hair syndrome germline X 78029271 CTTCTAAAGGGCTACAATAGAAGTATCTCCCGAACAGAAACGATAATACGATTTGCTTTCC 879255038 246355 NM_000527.4(LDLR):c.1829C>T (p.Ser610Phe) LDLR Mar 30, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11116982 AGGATGAAAAGAGGCTGGCCCACCCCTTCTCCTTGGCCGTCTTTGAGGTGTGGCTTACGTA 200640585 96857 NM_000535.6(PMS2):c.943C>T (p.Arg315Ter) PMS2 Aug 04, 2017 MedGen:CN221576;MedGen:C0027672,SNOMED CT:699346009;MedGen:C0009405,Orphanet:ORPHA443090;MedGen:C1838333,OMIM:614337;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:CN517202 Colorectal cancer, non-polyposis;Hereditary cancer-predisposing syndrome;Hereditary nonpolyposis colon cancer;Hereditary nonpolyposis colorectal cancer type 4;Lynch syndrome;not provided germline;unknown 7 5992018 CTCGTGAATGAGGTCTACCACATGTATAATCGACACCAGTATCCATTTGTTGTTCTTAACA 794726692 108182 NM_017775.3(TTC19):c.829C>T (p.Gln277Ter) TTC19 Jan 07, 2014 MedGen:C3554605,OMIM:615157 Mitochondrial complex III deficiency, nuclear type 2 germline 17 16025169 TCTGAAGAAATACAAGGAGAAAGACACCCACAGGTAAGGGAGGAAAACACAGAAGGGGGAA 137854476 31491 NM_000138.4(FBN1):c.1585C>T (p.Arg529Ter) FBN1 Dec 29, 2016 MedGen:CN229799;MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:CN517202 Marfan Syndrome/Loeys-Dietz Syndrome/Familial Thoracic Aortic Aneurysms and Dissections;Marfan syndrome;not provided germline 15 48513552 TATCAGAGCACACTCACGCGGACAGAATGCCGAGGTATGGTCCTGGCTCCTGACGTGGAAT 201732356 202926 NM_002693.2(POLG):c.3286C>T (p.Arg1096Cys) POLG Aug 24, 2017 MedGen:CN517202 not provided germline 15 89318737 CCCACCTTCCCTTCCCAGTTTATGACCAGCCGTGTGAATTGGGTGGTACAGAGCTCTGCTG 121909146 22586 NM_001122681.1(SH3BP2):c.1253C>T (p.Pro418Leu) SH3BP2 Jun 01, 2001 MedGen:C0008029,OMIM:118400,Orphanet:ORPHA184,SNOMED CT:76098004 Fibrous dysplasia of jaw germline 4 2831582 CCTCTCCCTGCCCCTCCAGGCGATCACCCCCCGATGGGCAGAGTTTCAGGAGCTTCTCCTT 771764281 420761 NM_001042492.2(NF1):c.82C>T (p.Gln28Ter) NF1 Jan 11, 2015 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 17 31156004 TTTTTTCAGCTTCCAATAAAAACAGGACAGCAGAACACACATACCAAAGTCAGTACTGAGC 770873593 197076 NM_004415.3(DSP):c.4198C>T (p.Arg1400Ter) DSP May 02, 2014 MedGen:CN517202 not provided germline 6 7580388 GGCTACCGGGCTCAGATAGACAATCTCACCCGAGAAAACAGGAGCTTATCTGAAGAAATAA 878853269 237780 NM_006734.3(HIVEP2):c.3556C>T (p.Gln1186Ter) HIVEP2 Jun 28, 2017 MedGen:C4310771,OMIM:616977 Mental retardation, autosomal dominant 43 germline 6 142771183 TCCTATATGACAAGCAAGCACTTACCTGAACAGCCACACTTATTTCCACATCAAGAGACAA 121434364 17142 NM_207118.2(GTF2H5):c.166C>T (p.Arg56Ter) GTF2H5 Jan 06, 2016 MedGen:C1866504,OMIM:601675;MedGen:C4017171,OMIM:616395 Trichothiodystrophy 1, photosensitive;Trichothiodystrophy 3, photosensitive germline 6 158192107 ATAGCAGAATTGGTTAATGTCCTCCAGGAGCGAGTGGGTGAATTAATGGACCAAAATGCTT 118204093 16541 NM_004035.6(ACOX1):c.442C>T (p.Arg148Ter) ACOX1 Nov 30, 2017 MedGen:C1849678,OMIM:264470,Orphanet:ORPHA2971;MedGen:CN517202 Pseudoneonatal adrenoleukodystrophy;not provided germline 17 75957555 ATGTAATTTATCTCCTTAGGAACTCACCTTCGAGGCTTGGAAACCACAGCCACGTATGACC 41469351 23229 NM_000579.3(CCR5):c.-229C>T CCR5 Dec 01, 1999 MedGen:C4017844 Human immunodeficiency virus type 1, increased perinatal transmission of germline 3 46370771 TCCAGTGAGAAAAGCCCGTAAATAAACCTTCAGACCAGAGATCTATTCTCTAGCTTATTTT 527236048 152796 NM_000390.3(CHM):c.808C>T (p.Arg270Ter) CHM Jul 31, 2017 Human Phenotype Ontology:HP:0001139,MedGen:C0008525,OMIM:303100,Orphanet:ORPHA180,SNOMED CT:75241009;MedGen:CN517202 Choroideremia;not provided germline X 85958872 ATTACCAGGATTCTTGCATTTCGAGAAGGACGAGTGGAACAGGTACTGTGCTGATCAAGAA 587778864 132294 NM_000321.2(RB1):c.1723C>T (p.Gln575Ter) RB1 Sep 16, 2013 Human Phenotype Ontology:HP:0009919,MeSH:D012175,MedGen:C0035335,OMIM:180200,Orphanet:ORPHA790 Retinoblastoma somatic 13 48453020 TAGGATTCACCTTTATTTGATCTTATTAAACAATCAAAGGACCGAGAAGGACCAACTGATC 886041222 264422 NM_000280.4(PAX6):c.781C>T (p.Arg261Ter) PAX6 Jun 19, 2017 MedGen:C0344542,OMIM:106210;MedGen:C0344542,OMIM:106210;Human Phenotype Ontology:HP:0000659,MedGen:C0344559,OMIM:604229,SNOMED CT:204153003;MedGen:CN517202 Aniridia 1;Aniridia 1;Irido-corneo-trabecular dysgenesis;not provided de novo;germline;unknown 11 31793787 CCACCTGATTTCCAGGTATGGTTTTCTAATCGAAGGGCCAAATGGAGAAGAGAAGAAAAAC 121908388 20292 NM_015247.2(CYLD):c.2272C>T (p.Arg758Ter) CYLD Sep 19, 2013 MedGen:C1851526,OMIM:132700;MedGen:CN169374 Cylindromatosis, familial;not specified germline;unknown 16 50792627 GCACCATCATGTCTGATTATTCAGATGCCTCGATTTGGAAAAGACTTTAAACTATTTAAAA 63750871 24273 NM_000535.6(PMS2):c.400C>T (p.Arg134Ter) PMS2 Jul 27, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0009405,Orphanet:ORPHA443090;MedGen:C1838333,OMIM:614337;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:C0265325,OMIM:276300,Orphanet:ORPHA252202,SNOMED CT:61665008;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Hereditary nonpolyposis colon cancer;Hereditary nonpolyposis colorectal cancer type 4;Lynch syndrome;Turcot syndrome;not provided germline;unknown 7 6002590 ACCTGCCACGCATCGGCGAAGGTTGGAACTCGACTGATGTTTGATCACAATGGGAAAATTA 104895462 19735 NM_022162.2(NOD2):c.1000C>T (p.Arg334Trp) NOD2 Nov 01, 2008 MedGen:C1861303,OMIM:186580,Orphanet:ORPHA90340;MedGen:C1836122,OMIM:609464 Blau syndrome;Sarcoidosis, early-onset germline 16 50710911 GAATTTCTCTTTGTCTTCCCATTCAGCTGCCGGCAGCTGCAGTGCATGGCCAAACCACTCT -1 482172 NM_015559.2(SETBP1):c.1264C>T (p.Gln422Ter) SETBP1 Jan 24, 2018 MedGen:CN517202 not provided germline 18 44950604 GATCCAACCAACCATAAGAGGAAAAAAAGACAGTCCATTAAAGCGGTGGTGGAAAAGATCA 772995852 204043 NM_152641.3(ARID2):c.4318C>T (p.Gln1440Ter) ARID2 Dec 14, 2017 MedGen:CN696018,OMIM:617808 COFFIN-SIRIS SYNDROME 6 germline 12 45852441 AGTATACAGGAGGCTTCAAATGCGGCAACACAGCAATTTAGTGGTACTGATTTGCTTAATG 63751693 96091 NM_000251.2(MSH2):c.1285C>T (p.Gln429Ter) MSH2 Dec 02, 2015 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Hereditary cancer-predisposing syndrome;Lynch syndrome germline 2 47445556 TTGTTTTACTACTTTCTTTTAGGAAAACACCAGAAATTATTGTTGGCAGTTTTTGTGACTC 587776407 153707 NM_024675.3(PALB2):c.451C>T (p.Gln151Ter) PALB2 Oct 11, 2016 MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Familial cancer of breast;Hereditary cancer-predisposing syndrome;not provided germline 16 23636095 CAGAAGCTGCCAAGCAGAAGAAAGAAGCAGCAGAAGAGGACATTTATTTCACAGGAGAGAG 387907310 45869 NM_014956.4(CEP164):c.277C>T (p.Arg93Trp) CEP164 Oct 08, 2012 MedGen:C3541853,OMIM:614845 Nephronophthisis 15 germline 11 117351872 ATGTGGGACCATCCATGTGACGAACACTATCGGAGCTTGGTGATCCAAGAGCGGGCAAAGC 386834070 71284 NM_017890.4(VPS13B):c.1219C>T (p.Gln407Ter) VPS13B Oct 17, 2016 Human Phenotype Ontology:HP:0007018,MedGen:C1263846,OMIM:143465,SNOMED CT:406506008;Human Phenotype Ontology:HP:0000670,MedGen:C0011334;MedGen:C0265223,OMIM:216550,Orphanet:ORPHA193,SNOMED CT:56604005;Human Phenotype Ontology:HP:0002761,MedGen:C1836308;Human Phenotype Ontology:HP:0001263,MedGen:C4020875;Human Phenotype Ontology:HP:0001249,MedGen:C1843367;Human Phenotype Ontology:HP:0000252,MedGen:C0424688;Human Phenotype Ontology:HP:0001252,MedGen:C0026827;Human Phenotype Ontology:HP:0002317,MedGen:C0231686;MedGen:CN517202 Attention deficit hyperactivity disorder;Carious teeth;Cohen syndrome;Generalized joint laxity;Global developmental delay;Intellectual disability;Microcephaly;Muscular hypotonia;Unsteady gait;not provided germline;inherited 8 99134644 TATTCTTATATTTCTTAGCTCACAGAAATGCAAGTTGAGAGTAGTTATTACAGTCCACAGA 753780877 185937 NM_003922.3(HERC1):c.9748C>T (p.Arg3250Ter) HERC1 Jul 08, 2015 MedGen:C4310766,OMIM:617011,Orphanet:ORPHA457359;MedGen:CN228136 Macrocephaly, dysmorphic facies, and psychomotor retardation;Megalencephaly with thick corpus callosum, cerebellar atrophy, and intellectual disability germline 15 63656210 TCTGCCATGGCTAGCACCTCAGAACGATCACGAGGTGGGCATAGCAAGGCTAACAAGCCTA 281865123 49438 NM_000530.7(MPZ):c.241C>T (p.His81Tyr) MPZ Mar 26, 2015 MedGen:C0270912,OMIM:118200,Orphanet:ORPHA101082,SNOMED CT:42986003;MedGen:C0270912,OMIM:118200,Orphanet:ORPHA101082,SNOMED CT:42986003 Charcot-Marie-Tooth disease, demyelinating, type 1b;Charcot-Marie-Tooth disease, demyelinating, type 1b germline 1 161306915 CATGCTTCCCCTCATTCCTCATAGATCTTCCACTATGCCAAGGGACAACCCTACATTGACG 80359849 16775 NM_001017420.2(ESCO2):c.505C>T (p.Arg169Ter) ESCO2 Oct 02, 2008 MedGen:C0392475,OMIM:268300,OMIM:269000,SNOMED CT:48718006 Roberts-SC phocomelia syndrome germline 8 27776813 TCAAGGAATTCTAGAAATTCCAAGCAAAATCGAGTGATCTATAAGCCAATTGTGGAGAAGG 773852926 359149 NM_153461.3(IL17RC):c.1126C>T (p.Arg376Ter) IL17RC Jul 06, 2015 MedGen:C4225324,OMIM:616445 Candidiasis, familial, 9 germline 3 9928340 CGCGCACACCAGAACCTCTGGCAAGCCGCCCGACTGCAACTGCTGACCCTGCAGAGCTGGC 397508740 68647 NM_000492.3(CFTR):c.4C>T (p.Gln2Ter) CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline 7 117480098 AGCAGGGACCCCAGCGCCCGAGAGACCATGCAGAGGTCGCCTCTGGAAAAGGCCAGCGTTG 128624221 26341 NM_000033.3(ABCD1):c.1390C>T (p.Arg464Ter) ABCD1 Aug 01, 1994 MedGen:C0162309,OMIM:300100,Orphanet:ORPHA43,SNOMED CT:65389002 Adrenoleukodystrophy germline X 153736510 GGTGTCCGTGTGGAGGGCCCCCTGAAGATCCGAGGTAAGGCTGTCCCCTCCCTATGAGTGA 587777442 141319 NM_000414.3(HSD17B4):c.101C>T (p.Ala34Val) HSD17B4 Nov 22, 2012 MedGen:C0685838,OMIM:233400,Orphanet:ORPHA2855,SNOMED CT:93466004 Gonadal dysgenesis with auditory dysfunction, autosomal recessive inheritance germline 5 119456357 CCTATGCCCTGGCTTTTGCAGAAAGAGGAGCGTTAGTTGTTGGTAAGTTGGTGTGTTTTTC 587779585 107044 NM_000090.3(COL3A1):c.4294C>T (p.Arg1432Ter) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189011667 GGGGAATGGAGCAAAACAGTCTTTGAATATCGAACACGCAAGGCTGTGAGACTACCTATTG 116987552 17337 NM_005609.3(PYGM):c.148C>T (p.Arg50Ter) PYGM Sep 21, 2017 MedGen:C0017924,OMIM:232600,Orphanet:ORPHA368,SNOMED CT:55912009;MedGen:CN517202 Glycogen storage disease, type V;not provided germline;unknown 11 64759751 CTCGTAAAGGACCGCAATGTGGCCACCCCACGAGACTACTACTTTGCTCTGGCCCATACCG 267606906 29189 NM_002471.3(MYH6):c.2489C>T (p.Pro830Leu) MYH6 Jul 05, 2005 MedGen:C2750466,OMIM:613252 Dilated cardiomyopathy 1EE germline 14 23394264 TTCGGGCCTTCATGGGGGTCAAGAATTGGCCCTGGATGAAGCTCTACTTCAAGATCAAGCC 886038114 248980 NM_000059.3(BRCA2):c.4972C>T (p.Gln1658Ter) BRCA2 Jun 01, 2017 MedGen:C2675520,OMIM:612555;MedGen:CN517202 Breast-ovarian cancer, familial 2;not provided germline 13 32339327 GCAAAAAGTCCTGCAACTTGTTACACAAATCAGTCCCCTTATTCAGTCATTGAAAATTCAG 770641163 183467 NM_000051.3(ATM):c.8977C>T (p.Arg2993Ter) ATM Oct 02, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Ataxia-telangiectasia syndrome;Ataxia-telangiectasia syndrome;Familial cancer of breast;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline;unknown 11 108365208 ACTCTGAATGCAGATGACCAAGAATGCAAACGAAATCTCAGGTGAGCAGTATTTTAAGAAG 755097302 368487 NM_023073.3(CPLANE1):c.1270C>T (p.Arg424Ter) CPLANE1 Jan 16, 2017 MedGen:CN517202 not provided germline 5 37227669 ATATCTGATGGATATATGGTCACAACCCTTCGATTTCTTGATAGCCTATCTCCATCAGTAC 878853559 241649 NM_000059.3(BRCA2):c.2095C>T (p.Gln699Ter) BRCA2 Aug 17, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;Human Phenotype Ontology:HP:0100013,MeSH:D001943,MedGen:C1458155,Orphanet:ORPHA180250,SNOMED CT:126926005;MedGen:CN517202 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;Neoplasm of the breast;not provided germline 13 32336450 AAAGAAGCAAAATGTAATAAGGAAAAACTACAGTTATTTATTACCCCAGAAGCTGATTCTC 137852364 25164 NM_000132.3(F8):c.1171C>T (p.Arg391Cys) F8 Apr 15, 1990 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154966526 GATGACAACTCTCCTTCCTTTATCCAAATTCGCTCAGTTGCCAAGAAGCATCCTAAAACTT 57890479 29684 NM_000424.3(KRT5):c.523C>T (p.Leu175Phe) KRT5 Aug 01, 1996 MedGen:C0079295,OMIM:131760,Orphanet:ORPHA79396;MedGen:CN517202 Epidermolysis bullosa herpetiformis, Dowling-Meara;not provided germline 12 52519774 AGGACCGAGGAGCGCGAGCAGATCAAGACCCTCAACAATAAGTTTGCCTCCTTCATCGACA 606231285 167469 NM_181503.2(EXOSC8):c.5C>T (p.Ala2Val) EXOSC8 Jul 03, 2014 MedGen:C4015160,OMIM:616081 Pontocerebellar hypoplasia, type 1c germline 13 37000810 GCAGGCGCAGACGCGCGGGCGGGAAGATGGCGGCTGGGTTCAAGTGAGTGTTGGCGGGTGG 121913300 132334 NM_000321.2(RB1):c.958C>T (p.Arg320Ter) RB1 Jul 06, 2017 MedGen:C0027672,SNOMED CT:699346009;Human Phenotype Ontology:HP:0009919,MeSH:D012175,MedGen:C0035335,OMIM:180200,Orphanet:ORPHA790 Hereditary cancer-predisposing syndrome;Retinoblastoma germline;somatic 13 48367512 TTTTCTTTCAAGGTTGAAAATCTTTCTAAACGATACGAAGAAATTTATCTTAAAAATAAAG 148559256 187652 NM_138387.3(G6PC3):c.829C>T (p.Gln277Ter) G6PC3 Jan 18, 2015 MedGen:C2675526,OMIM:612541,Orphanet:ORPHA331176 Severe congenital neutropenia 4, autosomal recessive germline 17 44075831 TCTCCCTGCTATGCCCAGGTGCGTCGGGCACAGCTGGGAAATGGCCAGAAGATAGCCTGCC 181327458 201287 NM_021007.2(SCN2A):c.823C>T (p.Arg275Ter) SCN2A Nov 01, 2013 MedGen:CN517202 not provided germline 2 165310448 ATAGGATTGCAGTTGTTCATGGGCAACCTACGAAATAAATGTTTGCAATGGCCTCCAGATA 121908050 18699 NM_000229.1(LCAT):c.440C>T (p.Thr147Ile) LCAT Jun 01, 1991 MedGen:C0342895,OMIM:136120,Orphanet:ORPHA79292,SNOMED CT:238092004 Fish-eye disease germline 16 67942754 CTGCTGGTCCCCCCACAGGGTACCTGCACACACTGGTGCAGAACCTGGTCAACAATGGCTA 61754634 28682 NM_000175.4(GPI):c.671C>T (p.Thr224Met) GPI Sep 15, 1996 MedGen:C3150730,OMIM:613470,Orphanet:ORPHA712 Hemolytic anemia, nonspherocytic, due to glucose phosphate isomerase deficiency germline 19 34378971 CTACCCAGGAGACCATCACGAATGCAGAGACGGCGAAGGAGTGGTTTCTCCAGGCGGCCAA 121917787 27079 NM_001018115.2(FANCD2):c.904C>T (p.Arg302Trp) FANCD2 Feb 01, 2001 MedGen:C3160738,OMIM:227646 Fanconi anemia, complementation group D2 germline 3 10043065 ATTTACTTTCTGCAGGTAATTTCTGAGCTTCGGGAGAAGTTGGATCTGCAGCATTGTGTTT 397514363 36350 NM_000060.4(BTD):c.469C>T (p.Arg157Cys) BTD Sep 30, 2016 MedGen:C0220754,OMIM:253260,Orphanet:ORPHA79241,SNOMED CT:8808004;MedGen:CN517202 Biotinidase deficiency;not provided germline 3 15644325 TTACACCTTTTTTTCCTCTAGGTGCTCCAGCGCCTGAGTTGTATGGCCATCAGGGGAGATA 74315424 18357 NM_020436.4(SALL4):c.1954C>T (p.Gln652Ter) SALL4 Nov 01, 2002 MedGen:C1623209,OMIM:607323,Orphanet:ORPHA93293 Duane-radial ray syndrome germline 20 51790529 CAGCAACATATTCGGATGCACATGGGCGGTCAGATTCCCAACACGCCCCTGCCAGAGAATC 573951598 76746 NM_000784.3(CYP27A1):c.1213C>T (p.Arg405Trp) CYP27A1 Aug 01, 2013 MedGen:C0238052,OMIM:213700,Orphanet:ORPHA909,SNOMED CT:63246000 Cholestanol storage disease not provided 2 218814408 AGTCTCTACCCTGTGGTCCCCACAAACTCCCGGATCATAGAAAAGGAAATTGAAGTTGATG 531009160 275014 NM_001025295.2(IFITM5):c.100C>T (p.Arg34Ter) IFITM5 Sep 15, 2016 MedGen:C1970414,OMIM:610967,Orphanet:ORPHA216828 Osteogenesis imperfecta type 5 germline 11 299391 CTCACACTGGGGGCCCCGCACCCCCCGCCTCGAGACCACTTGATCTGGTCGGTGTTCAGCA 137852334 25435 NM_000402.4(G6PD):c.1249C>T (p.Arg417Cys) G6PD May 24, 2017 MedGen:C2720289,OMIM:300908,Orphanet:ORPHA466026;na Anemia, nonspherocytic hemolytic, due to G6PD deficiency;G6PD GUADALAJARA germline X 154532695 GCCGGCGACATCTTCCACCAGCAGTGCAAGCGCAACGAGCTGGTGATCCGCGTGCAGCCCA 763091520 197655 NM_000138.4(FBN1):c.6169C>T (p.Arg2057Ter) FBN1 Nov 06, 2017 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:CN118826,Orphanet:ORPHA91387;MedGen:CN118826,Orphanet:ORPHA91387;MedGen:CN517202 Marfan syndrome;Thoracic aortic aneurysm and aortic dissection;Thoracic aortic aneurysm and aortic dissection;not provided germline 15 48437912 AGGGTGTCATAAATTTATGCTGCAGATTTGCGAATGAGCTACTGTTATGCGAAGTTTGAAG 397515453 75301 NM_181523.2(PIK3R1):c.1945C>T (p.Arg649Trp) PIK3R1 May 18, 2017 MedGen:C3554689,OMIM:615214;MedGen:C4014934,OMIM:616005;MedGen:C0878684,OMIM:269880;MedGen:C0878684,OMIM:269880;MedGen:CN517202 Agammaglobulinemia 7, autosomal recessive;Immunodeficiency 36;SHORT syndrome;SHORT syndrome;not provided germline;unknown 5 68296301 CGAGGGAAGCGAGATGGCACTTTTCTTGTCCGGGAGAGCAGTAAACAGGGCTGCTATGCCT 387906904 39429 NM_021625.4(TRPV4):c.694C>T (p.Arg232Cys) TRPV4 Jul 19, 2017 MedGen:C2079540,OMIM:606071;Gene:8094,MedGen:C1838492,OMIM:600175,Orphanet:ORPHA1216;MedGen:C0027868,Orphanet:ORPHA68381;Human Phenotype Ontology:HP:0002652,MedGen:C0410528,SNOMED CT:105986008;MedGen:CN517202 Charcot-Marie-Tooth disease type 2C;Distal spinal muscular atrophy, congenital nonprogressive;Neuromuscular Diseases;Skeletal dysplasia;not provided germline 12 109803009 AACATGAGGGAGTTCATTAACTCGCCCTTCCGTGACATCTACTATCGAGGTGGGGCCCCGG 749509661 193055 NM_014780.4(CUL7):c.4717C>T (p.Arg1573Ter) CUL7 Dec 22, 2014 MeSH:D030342,MedGen:C0950123;MedGen:C1848862,OMIM:273750 Inborn genetic diseases;Three M syndrome 1 germline 6 43038323 AGACGGAATCTTCTGAACTGCCTCATCGTCCGAATCCTCAAGGCCCATGGAGATGAGGGGC 45517297 58425 NM_000548.4(TSC2):c.3532C>T (p.Gln1178Ter) TSC2 Feb 03, 2017 MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000;MedGen:CN517202 Tuberous sclerosis syndrome;not provided germline 16 2080299 AAGGCCTCAGCTGGCACCCGGGTTCCTGTGCAGGAGAAGACGAACCTGGCGGCCTATGTGC 765274952 372593 NM_002336.2(LRP6):c.3178C>T (p.Arg1060Ter) LRP6 Jan 06, 2017 MedGen:CN517202 not provided germline 12 12148970 GTGGTGCTGAAAGGCGAGCAGGACAGACCTCGAGCCGTTGTGGTAAACCCAGAGAAAGGGT -1 427924 NM_021007.2(SCN2A):c.2566C>T (p.Arg856Ter) SCN2A Jan 30, 2017 MedGen:C3150987,OMIM:613721 Early infantile epileptic encephalopathy 11 germline 2 165344558 TAACACTGTTCTTGCTTTTATTTCCAGCTCCGAGTTTTCAAGTTGGCAAAATCTTGGCCAA 122458139 26605 NM_022977.2(ACSL4):c.1124C>T (p.Pro375Leu) ACSL4 Jan 01, 2003 MedGen:C1845672,OMIM:300387 Mental retardation 63, X-linked germline X 109674403 TACTGAAGCCCACACTTATGGCTGCTGTTCCGGTGAGTACAGAATATGAATATGAACATAA 201868387 360057 NM_000359.2(TGM1):c.790C>T (p.Arg264Trp) TGM1 Sep 05, 2015 MedGen:CN517202 not provided germline 14 24260026 GACATTGTGTACGTGGACCATGAGGATTGGCGGCAGGAGTATGTTCTTAATGAGTCTGGGA 119463991 18245 NM_001079802.1(FKTN):c.346C>T (p.Gln116Ter) FKTN Nov 01, 2003 MedGen:CN355827 Congenital muscular dystrophy-dystroglycanopathy with brain and eye anomalies, type A4 germline 9 105601325 GTTCCAAGAGACTTTACTGCATTTGCACTGCAGTATCACCTATGGAAGAATGAGGTAAGTG 63750558 96023 NM_000251.2(MSH2):c.1120C>T (p.Gln374Ter) MSH2 Oct 19, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Hereditary cancer-predisposing syndrome;Lynch syndrome germline 2 47429785 GAAGCTTTTGTAGAAGATGCAGAATTGAGGCAGACTTTACAAGAAGATTTACTTCGTCGAT 1057524341 374595 NM_015335.4(MED13L):c.4051C>T (p.Gln1351Ter) MED13L Jan 10, 2017 MedGen:CN517202 not provided germline 12 115987172 AAGCGCACGGGCAGGACCTGGGAGAACATCCAGCATGTGCAGGGACCACTCACTTGGCAGC 78194216 22201 NM_000492.3(CFTR):c.3196C>T (p.Arg1066Cys) CFTR Jun 19, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline;unknown 7 117611637 GTTACAAGCTTAAAAGGACTATGGACACTTCGTGCCTTCGGACGGCAGCCTTACTTTGAAA 886041968 264793 NM_001170629.1(CHD8):c.2992C>T (p.Gln998Ter) CHD8 Sep 12, 2016 MedGen:CN517202 not provided germline 14 21405780 TTTAGCTTGCTTCATTTCTTGGAACCGTCACAATTTCCCTCAGAATCAGAGTTTCTCAAGG 878853088 237340 NM_006015.4(ARID1A):c.1207C>T (p.Gln403Ter) ARID1A Apr 22, 2016 MedGen:CN517202 not provided germline 1 26729720 CAGCCATATGGCGGGACTAACCCATACTCGCAGCAACAGGGACCTCCGTCAGGACCGCAGC 1057523157 367600 NM_014159.6(SETD2):c.5218C>T (p.Arg1740Trp) SETD2 Jan 31, 2017 MedGen:CN517202 not provided germline 3 47088172 TCTGATAAAAACCAGGTGCTCAGCTTATCCCGGCTAATGGTTAGAATTGAAACTTTGGAGC 776245016 380164 NM_001033053.2(NLRP1):c.2176C>T (p.Arg726Trp) NLRP1 Mar 08, 2017 MedGen:CN240904,OMIM:617388 Autoinflammation with arthritis and dyskeratosis germline 17 5558520 CTGGAGTCCCTCCACTGCTTGTACGAGACTCGGAACAAAACGTTCCTGACACAAGTGATGG 794728482 197261 NM_000238.3(KCNH2):c.1694C>T (p.Ala565Val) KCNH2 Oct 03, 2011 MedGen:CN517202 not provided germline 7 150951699 GCACCTTTGCGCTCATCGCGCACTGGCTAGCCTGCATCTGGTACGCCATCGGCAACATGGA 137852368 25178 NM_000132.3(F8):c.1063C>T (p.Arg355Ter) F8 Jun 13, 1986 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154966634 GTAGACAGCTGTCCAGAGGAACCCCAACTACGAATGAAAAATAATGAAGAAGCGGAAGACT 1131691539 421875 NM_000391.3(TPP1):c.787C>T (p.Gln263Ter) TPP1 Sep 02, 2015 MedGen:CN517202 not provided germline 11 6616760 CATCAGGCATCAGTAGCCCGTGTGGTTGGACAACAGGGCCGGGGCCGGGCCGGGATTGAGG 786204433 186802 NM_000051.3(ATM):c.5644C>T (p.Arg1882Ter) ATM Dec 15, 2016 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Ataxia-telangiectasia syndrome;Hereditary cancer-predisposing syndrome;not provided germline;unknown 11 108304822 AGCTGTCTTCGACACTTCTCGCAAACGAGCCGATCCACAACCCCTGCAAACTTGGATTCAG 587783479 169247 NM_004380.2(CREBBP):c.3310C>T (p.Gln1104Ter) CREBBP Feb 08, 2013 MedGen:C0035934,OMIM:180849,Orphanet:ORPHA353277,SNOMED CT:45582004 Rubinstein-Taybi syndrome germline 16 3758913 CTCATGCCAACCCTAGAAGCACTGTATCGACAGGACCCAGAGTCATTACCTTTCCGGCAGC 370247862 462106 NM_005609.3(PYGM):c.280C>T (p.Arg94Trp) PYGM Jun 13, 2017 MedGen:C0017924,OMIM:232600,Orphanet:ORPHA368,SNOMED CT:55912009 Glycogen storage disease, type V germline 11 64758668 TACTACCTGTCTTTAGAGTTCTATATGGGACGGACGCTACAGAACACCATGGTGAACCTGG 786203888 183080 NM_000051.3(ATM):c.151C>T (p.Gln51Ter) ATM Dec 22, 2014 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 11 108227854 AAACATCTAGATCGGCATTCAGATTCCAAACAAGGAAAATATTTGAATTGGGATGCTGTTT 199473457 67754 NM_000218.2(KCNQ1):c.691C>T (p.Arg231Cys) KCNQ1 May 23, 2017 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MedGen:C0035828,OMIM:192500,Orphanet:ORPHA101016,SNOMED CT:20852007;MedGen:CN517202 Congenital long QT syndrome;Long QT syndrome 1;not provided germline;unknown 11 2572020 GCCCCACACCATCTCCTTCGCAGGGGCATCCGCTTCCTGCAGATCCTGAGGATGCTACACG 121434618 25950 NM_017745.5(BCOR):c.254C>T (p.Pro85Leu) BCOR Oct 02, 2014 MedGen:C1846265,OMIM:300166,Orphanet:ORPHA2712 Oculofaciocardiodental syndrome germline X 40075092 CTGGCCTGATCCGGGAAGGGCTGCGGGTCCCGGGAAACATCGTCTATTCTAGCTTGTGTGG -1 481474 NM_014946.3(SPAST):c.1484C>T (p.Ala495Val) SPAST Sep 08, 2017 MedGen:C1866855,OMIM:182601,Orphanet:ORPHA100985 Spastic paraplegia 4, autosomal dominant de novo 2 32137179 CAACTAATAGGCCACAAGAGCTTGATGAGGCTGTTCTCAGGTAGGGAGATTTATATGGAAA 118203956 16240 NM_020381.3(PDSS2):c.1145C>T (p.Ser382Leu) PDSS2 Jun 07, 2016 MedGen:C3553358,OMIM:614652 Coenzyme Q10 deficiency, primary, 3 germline 6 107154674 CACTGGAGGCCCTGGAGAGCTTTCCTCCCTCGGAGGCCAGATCTGCTTTAGAAAACATTGT -1 475820 NM_000051.3(ATM):c.6913C>T (p.Gln2305Ter) ATM Apr 06, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 11 108326163 GAAGCACAAGTATTCTGGGCAAAAAAGGAGCAGAGTCTTGCCCTGAGTATTCTCAAGCAAA 751565386 432071 NM_014112.4(TRPS1):c.2761C>T (p.Arg921Ter) TRPS1 Jan 24, 2017 MedGen:C0432233,OMIM:190350,SNOMED CT:254091006 Trichorhinophalangeal dysplasia type I germline 8 115418392 AATTGCCTGACCACAAAGACCTCTCTCTGGCGAAAGAATGCAAATGGCGGATATGTATGCA 587784483 168982 NM_006009.3(TUBA1A):c.1204C>T (p.Arg402Cys) TUBA1A May 15, 2017 MedGen:C1969029,OMIM:611603,Orphanet:ORPHA102011;MedGen:CN517202 Lissencephaly 3;not provided germline 12 49185162 GACCACAAGTTTGACCTGATGTATGCCAAACGTGCCTTTGTTCACTGGTACGTTGGGGAGG 794726736 187823 NM_001165963.1(SCN1A):c.1738C>T (p.Arg580Ter) SCN1A Jun 19, 2017 MedGen:C0393706,Orphanet:ORPHA1934;MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002;MedGen:CN517202 Early infantile epileptic encephalopathy;Severe myoclonic epilepsy in infancy;not provided de novo;germline 2 166043974 AGCAGAACAAGCCTTTTCAGCTTTAGAGGGCGAGCAAAGGATGTGGGATCTGAGAACGACT -1 481817 NM_006766.4(KAT6A):c.949C>T (p.Arg317Ter) KAT6A Jan 02, 2018 MedGen:CN517202 not provided germline 8 41978736 TGTCAAATATGTCGACCTAGGAAAAAAGGACGAAAACTTCTACAAAAGAAGGCAGCACAGA 759080581 202600 NM_000391.3(TPP1):c.196C>T (p.Gln66Ter) TPP1 Oct 09, 2014 MedGen:CN517202 not provided germline 11 6618809 CAGAATGTGGAAAGACTCTCGGAGCTGGTGCAGGCTGTGTCGGATCCCAGCTCTCCTCAAT 121908309 19365 NM_001005741.2(GBA):c.1192C>T (p.Arg398Ter) GBA Oct 31, 2017 MedGen:C1842704,OMIM:608013,Orphanet:ORPHA85212;MedGen:C1961835,OMIM:230800,SNOMED CT:62201009;MedGen:CN517202 Gaucher disease, perinatal lethal;Gaucher's disease, type 1;not provided germline 1 155236277 GAGCAGAGTGTGCGGCTAGGCTCCTGGGATCGAGGGATGCAGTACAGCCACAGCATCATCA 150331292 362142 NM_199053.2(TRAPPC11):c.142C>T (p.Arg48Ter) TRAPPC11 - MedGen:C3809236,OMIM:615356 Limb-girdle muscular dystrophy, type 2S germline 4 183664009 GACGCCTTCTGTGCAAATCGGAGAGCTGATCGAGTACCAATTTCTTTCAAGGTGCTCCCAG 201987973 227688 NM_001256047.1(C19orf12):c.215C>T (p.Pro72Leu) C19orf12 Jan 15, 2013 MedGen:C3280371,OMIM:614298,Orphanet:ORPHA289560 Neurodegeneration with brain iron accumulation 4 germline 19 29702923 GTGCCTGGATGACAAGTGGACAGTTTAAGCCGGTTCCTCAGATCCTAATGGAGCTGCCCCC -1 444705 NM_000051.3(ATM):c.664C>T (p.Gln222Ter) ATM Aug 25, 2017 MedGen:CN517202 not provided germline 11 108244789 CCCAGTTGAGCTTGTTTGTTTCTTCACAGACAAGAAAAGAGCTCTTCAGGTCTAAATCATA 121912609 17028 NM_144966.5(FREM1):c.1945C>T (p.Arg649Trp) FREM1 Sep 01, 2009 MedGen:C2750433,OMIM:608980,Orphanet:ORPHA217266;MedGen:CN517202 Bifid nose with or without anorectal and renal anomalies;not provided germline 9 14824929 CAGCTTCCAAAAGAGGCTCCTGGAGTTTCTCGGCATTTGGTTGTCAAGGAAACTGAGGTGG 796052623 203792 NM_172107.3(KCNQ2):c.601C>T (p.Arg201Cys) KCNQ2 Mar 31, 2016 MedGen:C3150986,OMIM:613720,Orphanet:ORPHA439218;MedGen:CN517202 Early infantile epileptic encephalopathy 7;not provided de novo;germline 20 63444748 GTCTTTGCCACATCTGCGCTCCGGAGCCTGCGCTTCCTGCAGATTCTGCGGATGATCCGCA 397515577 76667 NM_152296.4(ATP1A3):c.2051C>T (p.Ser684Phe) ATP1A3 May 04, 2014 MedGen:C1868681,OMIM:128235,Orphanet:ORPHA71517 Dystonia 12 de novo 19 41976459 ATCACACCGAGATCGTCTTCGCCCGCACATCCCCCCAGCAGAAGCTCATCATTGTGGAGGG -1 439571 NM_000829.3(GRIA4):c.1931C>T (p.Ala644Val) GRIA4 Feb 07, 2018 MedGen:CN800195,OMIM:617864 NEURODEVELOPMENTAL DISORDER WITH OR WITHOUT SEIZURES AND GAIT ABNORMALITIES de novo;germline 11 105926824 TTATATCATCTTATACTGCTAACCTCGCTGCTTTCCTGACGGTTGAGCGAATGGTCTCTCC 781984979 446880 NM_003846.2(PEX11B):c.595C>T (p.Arg199Ter) PEX11B Jun 26, 2016 MedGen:C3554055,OMIM:614920 Peroxisome biogenesis disorder 14B maternal 1 145912346 AAACTTCGGCTGCAAGTCCTGCTCCTGGCTCGAGTCCTTAGAGGTCATCCCCCACTTCTGC 779508996 411363 NM_003688.3(CASK):c.1837C>T (p.Arg613Ter) CASK Nov 10, 2017 MedGen:C2677903,OMIM:300749,Orphanet:ORPHA163937;MedGen:CN517202 Mental retardation and microcephaly with pontine and cerebellar hypoplasia;not provided de novo;germline X 41555605 GACTTGCCATCAACTACCCAACCAAAAGGACGACAGGTGAATAGATATCCTCTATAGAAAC 544349961 191076 NM_020166.4(MCCC1):c.1114C>T (p.Gln372Ter) MCCC1 May 18, 2017 MedGen:CN028786,OMIM:210200 3 Methylcrotonyl-CoA carboxylase 1 deficiency germline;unknown 3 183041720 ATTGCAGCAGGAGAGAAGATTCCTTTGAGCCAGGAAGAAATAACTCTGCAGGGCCATGCCT 28933082 29911 NM_000523.3(HOXD13):c.916C>T (p.Arg306Trp) HOXD13 Nov 01, 2002 MedGen:C2699746,OMIM:186000,Orphanet:ORPHA93403 Synpolydactyly 1 germline 2 176094614 GCCATTAACAAATTCATTAACAAGGACAAGCGGCGGCGTATCTCGGCTGCTACGAACCTAT 121913048 31627 NM_000122.1(ERCC3):c.1633C>T (p.Gln545Ter) ERCC3 Nov 01, 2006 MedGen:C1970808,OMIM:610651 Xeroderma pigmentosum, complementation group b germline 2 127279270 ACCATGAACCCCAACAAATTTAGAGCTTGCCAGTTTCTGATCAAGTTTCATGAAAGGAGGA 1135402857 425143 NM_001042492.2(NF1):c.4339C>T (p.Gln1447Ter) NF1 Feb 02, 2017 MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003 Neurofibromatosis, type 1 germline 17 31259038 TTATAACCCTGTTTTATTGTGTAGATACTTCAGAGTATTGCCAATCATGTTCTCTTCACAA 1060502505 400555 NM_152594.2(SPRED1):c.421C>T (p.Gln141Ter) SPRED1 Sep 05, 2016 MedGen:C1969623,OMIM:611431,Orphanet:ORPHA137605 Legius syndrome germline 15 38324807 AAAAATGAAGCTGAAGGGGCAGATGACTTACAAGTAAGTAATGGCTTGGAAGGAATTTGTA 397507384 46644 NM_000059.3(BRCA2):c.7235C>T (p.Thr2412Ile) BRCA2 Feb 03, 2009 MedGen:C2675520,OMIM:612555 Breast-ovarian cancer, familial 2 germline 13 32355088 CAACCAAAGTCTTTGTTCCACCTTTTAAAACTAAATCACATTTTCACAGAGTTGAACAGTG 797044955 205242 NM_002222.5(ITPR1):c.800C>T (p.Thr267Met) ITPR1 Jun 27, 2013 MeSH:D030342,MedGen:C0950123 Inborn genetic diseases germline 3 4645673 GGAAGAAGCAGCACGTCTTCCTGAGAACCACGGGCCGGCAGTCGGCCACATCTGCCACCAG 576928842 169188 NM_001143979.1(NDE1):c.658C>T (p.Arg220Ter) NDE1 Aug 13, 2013 MedGen:C3151461,OMIM:614019 Lissencephaly 4 germline 16 15691278 GGCTCCGTGCCGTCCACGCCCATTGCTCACCGAGGACCCAGCTCAAGTTTAAACACACCTG 63750743 15773 NM_024334.2(TMEM43):c.1073C>T (p.Ser358Leu) TMEM43 Mar 06, 2017 MedGen:C0349788,Orphanet:ORPHA247,SNOMED CT:253528005,SNOMED CT:281170005;MedGen:C1858379,OMIM:604400;MedGen:CN221565;MedGen:CN517202 Arrhythmogenic right ventricular cardiomyopathy;Arrhythmogenic right ventricular cardiomyopathy, type 5;Arrhythmogenic right ventricular dysplasia/cardiomyopathy;not provided germline 3 14141665 TGAAAGCCTTTGCCTTCTGTGTGGCCACCTCGCTGACCCTGCTGACCGTGGCGGCTGGCTG 1085307081 227203 NM_015331.2(NCSTN):c.1300C>T (p.Arg434Ter) NCSTN Mar 18, 2016 MedGen:CN028850,OMIM:142690 Familial acne inversa 1 germline 1 160354238 CCATCTTCCCTGCAGCGATTTCTTCGAGCTCGAAACATCTCTGGCGTTGTTCTGGCTGACC 121909308 23566 NM_000178.3(GSS):c.799C>T (p.Arg267Trp) GSS Nov 01, 1996 Human Phenotype Ontology:HP:0003343,MedGen:C0398746,OMIM:266130,Orphanet:ORPHA289846,SNOMED CT:234589002 Gluthathione synthetase deficiency germline 20 34935611 GATGGCCAGGAAATTGCTGTGGTTTACTTCCGGGATGGCTACATGCCTCGTCAGTACAGTC 121912592 17458 NM_001875.4(CPS1):c.1631C>T (p.Thr544Met) CPS1 Jan 01, 1998 MedGen:C0751753,OMIM:237300,Orphanet:ORPHA147,SNOMED CT:62522004 Congenital hyperammonemia, type I germline 2 210600636 TGGGAACTTCAGTTGAGTCCATTATGGCTACGGAAGACAGGCAGCTGTTTTCAGATAAACT 747010865 442461 NM_000216.3(ANOS1):c.1270C>T (p.Arg424Ter) ANOS1 Apr 28, 2016 MedGen:CN517202 not provided germline X 8554036 ATTCAAACACAACTCCCTTTTCAAAGACGACGACCCACTCGCCCGCTGGAAGTCGGAGCTC 267607260 46921 NM_002437.4(MPV17):c.509C>T (p.Ser170Phe) MPV17 May 17, 2012 MedGen:C1850406,OMIM:256810,Orphanet:ORPHA255229 Navajo neurohepatopathy not provided 2 27309934 GTGTTGCTGTTATCTGGAACTCCTACCTGTCCTGGAAGGCACATCGGCTCTAAGCCTGCCT 60297570 77559 NM_006121.3(KRT1):c.698C>T (p.Ser233Leu) KRT1 Mar 20, 2015 MedGen:CN517202 not provided germline 12 52678650 GAACCCATAATTTAGAGCCCTACTTTGAGTCATTCATCAACAATCTCCGAAGGAGAGTGGA 878853246 237750 NM_000162.4(GCK):c.112C>T (p.Gln38Ter) GCK Apr 13, 2016 MedGen:C1841962,OMIM:125851 Maturity-onset diabetes of the young, type 2 inherited 7 44153397 GAGGACCTGAAGAAGGTGATGAGACGGATGCAGAAGGAGATGGACCGCGGCCTGAGGCTGG 868755574 243964 NM_018076.4(ARMC4):c.1969C>T (p.Gln657Ter) ARMC4 Apr 03, 2013 MedGen:C3809548,OMIM:615451 Primary ciliary dyskinesia 23 germline 10 27940580 AACATGCTAATTCCAGTGGTGGGGACATTGCAAGAGTGTGCATCAGAGGTACTCATGCCAG 72551315 76799 NM_000784.3(CYP27A1):c.691C>T (p.Arg231Ter) CYP27A1 Aug 01, 2013 MedGen:C0238052,OMIM:213700,Orphanet:ORPHA909,SNOMED CT:63246000 Cholestanol storage disease not provided 2 218812596 CTGTTCGAGAAACGCATTGGCTGCCTGCAGCGATCCATCCCCGAGGACACCGTGACCTTCG 759900071 407740 NM_000136.2(FANCC):c.1069C>T (p.Gln357Ter) FANCC Nov 04, 2016 MedGen:CN517202 not provided germline 9 95117318 TCTCTTGCCATGGTGCTGCTGCAAGACCCTCAAGGTGAGTTAGGGTTGACTTTGCCCACAT 886041378 264122 NM_003106.3(SOX2):c.181C>T (p.Gln61Ter) SOX2 Aug 15, 2016 MedGen:CN517202 not provided germline 3 181712541 TGGTCCCGCGGGCAGCGGCGCAAGATGGCCCAGGAGAACCCCAAGATGCACAACTCGGAGA 754867753 213410 NM_017950.3(CCDC40):c.961C>T (p.Arg321Ter) CCDC40 Jul 04, 2016 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244 Ciliary dyskinesia germline 17 80050085 TTGGTCCAGGTTGTGGCTACCAAGCAGAGCCGAGCCCAGCGGCAGGAGCTGGGGGTGAATC 387907085 40001 NM_001006657.1(WDR35):c.1633C>T (p.Arg545Ter) WDR35 Apr 08, 2011 MedGen:C3279792,OMIM:614091 Short rib polydactyly syndrome 5 germline 2 19946495 GGTTTGATTCAAAAATATTCCCTTAATTGTCGAGCCTACCAGTTATCCTTGAATTGCAACT 772217003 481599 NM_020631.4(PLEKHG5):c.2053C>T (p.Gln685Ter) PLEKHG5 Jul 10, 2017 MedGen:CN517202 not provided germline 1 6469238 TCCCATGTACCCCAACCTTGCCTGCAGAACCAGCTGCAACAGCTGCGTGCACAGGAGCCCC 587784176 168249 NM_022455.4(NSD1):c.6049C>T (p.Arg2017Trp) NSD1 Jul 15, 2014 MedGen:CN035106,OMIM:117550 Sotos syndrome 1 germline 5 177283826 ATTGATGCTGGTCCCAAAGGAAACTATGCTCGGTTCATGAATCATTGCTGCCAGCCCAACT 397514578 48352 NM_145239.2(PRRT2):c.562C>T (p.Gln188Ter) PRRT2 Dec 13, 2012 MedGen:C1865926,OMIM:602066,Orphanet:ORPHA31709 Infantile convulsions and paroxysmal choreoathetosis, familial germline 16 29813616 AAGCAAGAGAATGGGGCAGTGGTGCCCCTGCAGGCTGGTGATGGGGAAGAGGGCCCAGCCC 45517132 59085 NM_000548.4(TSC2):c.848+281C>T TSC2 Dec 05, 2016 MedGen:C1860707,OMIM:613254;MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000 Tuberous sclerosis 2;Tuberous sclerosis syndrome germline 16 2057459 TGCTCCCCAACTACTTAGCCTGTTACAAGGCGAGGCTCGGGGTCTTGGCTTGACGTTGCCC 764060752 443374 NM_007289.3(MME):c.877C>T (p.Arg293Ter) MME Aug 07, 2017 MedGen:CN517202 not provided germline 3 155140212 AATCCATAGGCTACGGCTAAACCTGAAGATCGAAATGATCCAATGCTTCTGTATAACAAGA 121917847 27721 NM_003301.5(TRHR):c.49C>T (p.Arg17Ter) TRHR May 01, 1997 MedGen:C1861106 Thyrotropin-releasing hormone resistance, generalized germline 8 109087561 AGTGAACTGAACCAAACACAGCTTCAGCCACGAGCAGTGGTGGCCTTAGAATACCAGGTGG 756414485 203882 NM_001184880.1(PCDH19):c.2656C>T (p.Arg886Ter) PCDH19 Feb 16, 2017 MedGen:CN517202 not provided germline X 100350665 TATTCTTTTGACTCCAACTACGTGAATAGCCGAGCCCATTTAATCAAGAGGTATGTTGGTT 74315470 18112 NM_000487.5(ARSA):c.736C>T (p.Arg246Cys) ARSA Jun 19, 2014 MedGen:C0023522,OMIM:250100,Orphanet:ORPHA512,SNOMED CT:396338004 Metachromatic leukodystrophy germline;unknown 22 50626709 AGTGGGCAGAGCTTTGCAGAGCGTTCAGGCCGCGGGCCATTTGGGGACTCCCTGATGGAGC 761773115 216054 NM_000255.3(MUT):c.19C>T (p.Gln7Ter) MUT Dec 01, 2016 MedGen:C1855114,OMIM:251000 Methylmalonic aciduria due to methylmalonyl-CoA mutase deficiency germline 6 49459448 CCATGCTCCACCATGTTAAGAGCTAAGAATCAGCTTTTTTTACTTTCACCTCATTACCTGA 63751326 96616 NM_000251.2(MSH2):c.577C>T (p.Gln193Ter) MSH2 Oct 18, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Hereditary cancer-predisposing syndrome;Lynch syndrome germline 2 47410304 CAGTTCTCCAATCTTGAGGCTCTCCTCATCCAGATTGGACCAAAGGAATGTGTTTTACCCG 104894313 18816 NM_000372.4(TYR):c.1217C>T (p.Pro406Leu) TYR May 24, 2017 MedGen:C0078918,Orphanet:ORPHA55,SNOMED CT:63844009;MedGen:C1847024,OMIM:606952,Orphanet:ORPHA79434;MedGen:C0268494,OMIM:203100,Orphanet:ORPHA79431,SNOMED CT:6483008;MedGen:CN517202 Oculocutaneous albinism;Oculocutaneous albinism type 1B;Tyrosinase-negative oculocutaneous albinism;not provided germline 11 89284805 TTTTTGAGCAGTGGCTCCGAAGGCACCGTCCTCTTCAAGAAGTTTATCCAGAAGCCAATGC 121434301 20518 NM_006329.3(FBLN5):c.259C>T (p.Pro87Ser) FBLN5 Jun 01, 2011 MedGen:C1837187,OMIM:608895 Age-related macular degeneration 3 germline 14 91937067 CGAGGGCCCTACTCGAACCCCTACTCGACCCCCTACTCAGGTCCGTACCCAGCAGCTGCCC 1057518697 361245 NM_004187.3(KDM5C):c.1439C>T (p.Pro480Leu) KDM5C Jul 26, 2017 MedGen:C1845243,OMIM:300534,Orphanet:ORPHA85279;MedGen:CN517202 Mental retardation, syndromic, Claes-Jensen type, X-linked;not provided de novo;germline X 53210820 CTACCAGTGGTTGGAACCTAAATGTGATGCCGGTGTTGGAACAGTCTGTACTGTGCCACAT 199422151 34421 NM_018136.4(ASPM):c.2938C>T (p.Arg980Ter) ASPM Sep 01, 2009 MedGen:C1837501,OMIM:608716 Primary autosomal recessive microcephaly 5 not provided 1 197125190 ATTTCATCTGAACATTTTATTACTGCCAGGCGAACCATGGAACTTCTCACACAGAACTGGG 794726860 190159 NM_003042.3(SLC6A1):c.863C>T (p.Ala288Val) SLC6A1 Feb 16, 2016 MedGen:C4085238,OMIM:616421;MedGen:CN517202 Myoclonic-atonic epilepsy;not provided germline 3 11025786 GATAATTCTGCCTATAGGTGTGGCTGGATGCGGCAACCCAGATCTTCTTCTCATACGGGCT -1 456963 NM_001277115.1(DNAH11):c.4567C>T (p.Gln1523Ter) DNAH11 May 16, 2017 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244 Ciliary dyskinesia germline 7 21635937 GAATATTTCATTGAGCAAGTGTTAAGCTGGCAAAATAAATTAAACATAGCAGACTTGGTCA 132630273 26162 NM_000377.2(WAS):c.134C>T (p.Thr45Met) WAS Jan 01, 2001 MedGen:C1839163,OMIM:313900,Orphanet:ORPHA852 Thrombocytopenia, X-linked germline X 48684284 CTCCACTGACCCCTGCTTTCCTCTCCCAGACGCTGGCCACTGCAGTTGTTCAGCTGTACCT 28933408 432550 NM_000461.4(THRB):c.1357C>T (p.Pro453Ser) THRB Nov 19, 2016 MedGen:C2937288,OMIM:188570;MedGen:CN517202 Thyroid hormone resistance, generalized, autosomal dominant;not provided germline 3 24122913 AAGGTGGAATGCCCCACAGAACTCTTCCCCCCTTTGTTCTTGGAAGTGTTCGAGGATTAGA 137852456 25346 NM_000132.3(F8):c.6263C>T (p.Ser2088Phe) F8 Jan 01, 1995 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154899876 TCAATGCCTGGAGCACCAAGGAGCCCTTTTCTTGGATCAAGGTTAGAAAATGTAATCAATG 61750240 26854 NM_004992.3(MECP2):c.808C>T (p.Arg270Ter) MECP2 Oct 18, 2017 MedGen:C1845336,OMIM:300496;MedGen:CN221284;Gene:57790,MedGen:C1846058,OMIM:300260,Orphanet:ORPHA1762;MedGen:C1968550,OMIM:300055;MedGen:C1968550,OMIM:300055;MedGen:C0035372,OMIM:312750,Orphanet:ORPHA778,SNOMED CT:68618008;MedGen:C0035372,OMIM:312750,Orphanet:ORPHA778,SNOMED CT:68618008;MedGen:C1968556,OMIM:300673,Orphanet:ORPHA209370;MedGen:C1968556,OMIM:300673,Orphanet:ORPHA209370;MedGen:CN517202 Autism, susceptibility to, X-linked 3;Encephalopathy, neonatal severeMental retardation, X-linked, syndromic 13Rett syndrome;MECP2 duplication syndrome;Mental retardation, X-linked, syndromic 13;Mental retardation, X-linked, syndromic 13;Rett syndrome;Rett syndrome;Severe neonatal-onset encephalopathy with microcephaly;Severe neonatal-onset encephalopathy with microcephaly;not provided de novo;germline;unknown X 154031020 GACCCTCAGGCCATTCCCAAGAAACGGGGCCGAAAGCCGGGGAGTGTGGTGGCAGCCGCTG 797045164 204421 NM_001244008.1(KIF1A):c.646C>T (p.Arg216Cys) KIF1A Mar 16, 2017 MedGen:C3280283,OMIM:614255;MedGen:C1850055,OMIM:260565,Orphanet:ORPHA2836 Mental retardation, autosomal dominant 9;PEHO syndrome de novo;germline 2 240785063 GCGGCCACCAACATGAATGAGACCAGCAGTCGCTCCCACGCCGTCTTCAACATCATCTTCA 72556278 103120 NM_000531.5(OTC):c.506C>T (p.Pro169Leu) OTC - MedGen:CN517202 not provided unknown X 38401394 TTATCAATGGGCTGTCAGATTTGTACCATCCTATCCAGATCCTGGCTGATTACCTCACGCT 121909562 33068 NM_000488.3(SERPINC1):c.481C>T (p.Arg161Ter) SERPINC1 Jul 01, 1991 MedGen:C0272375,OMIM:613118,Orphanet:ORPHA82,SNOMED CT:36351005 Antithrombin III deficiency germline 1 173911942 ATCCACTTCTTCTTTGCCAAACTGAACTGCCGACTCTATCGAAAAGCCAACAAATCCTCCA 121918529 23988 NM_005587.3(MEF2A):c.836C>T (p.Pro279Leu) MEF2A Feb 01, 2006 na Coronary artery disease/myocardial infarction germline 15 99690400 GGAAACCAGATCTTCGAGTTGTCATCCCCCCTTCAAGCAAGGGCATGATGCCTCCACTAGT 758719615 243873 NM_001008537.2(NEXMIF):c.652C>T (p.Arg218Ter) NEXMIF Sep 14, 2017 MedGen:CN181337;MedGen:CN517202 Continuous spike and waves during slow-wave sleep syndrome;not provided de novo;germline X 74743905 CCCCTGCATAAGTCAAGGGCAGGAGACAGACGAGAAACTGAGAAACCTGACATTGACTTGG 397514641 48599 NM_000267.3(NF1):c.574C>T (p.Arg192Ter) NF1 Sep 07, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Neurofibromatosis, type 1;not provided germline 17 31169985 TATATCAATGTGGATTGTGCAAAATTAAAACGACTCCTGAAGGGTAAGTTTAAATGTATAA 137854562 15400 NM_001042492.2(NF1):c.3721C>T (p.Arg1241Ter) NF1 Sep 15, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Neurofibromatosis, type 1;not provided germline 17 31235623 ATTTTGTTTTGTTCTCAGGATGAACTAGCTCGAGTTCTGGTTACTCTGTTTGATTCTCGGC 794729174 198555 NM_000116.4(TAZ):c.526C>T (p.His176Tyr) TAZ Feb 22, 2012 MedGen:CN517202 not provided germline X 154419608 TTGGAGAAGCTCAACCATGGGGACTGGGTGCATATCTTCCCAGAAGGTCAGCAGGGCTGAC 1057517311 358182 NM_014363.5(SACS):c.5125C>T (p.Gln1709Ter) SACS Oct 04, 2016 MedGen:C1849140,OMIM:270550,Orphanet:ORPHA98 Spastic ataxia Charlevoix-Saguenay type unknown 13 23338751 AAAATTGAGGAAACCAACCCCAGTTTAGCACAAGATACAGTAATAATTAAAAAAAAATCCT 772552898 216045 NM_000255.3(MUT):c.1105C>T (p.Arg369Cys) MUT Mar 27, 2017 MedGen:C1855114,OMIM:251000;MedGen:CN517202 Methylmalonic aciduria due to methylmalonyl-CoA mutase deficiency;not provided germline 6 49451693 ATATTTTAGGATCCCTACAATAATATTGTCCGTACTGCAATAGAAGCAATGGCAGCAGTAT 267606958 21565 NM_018129.3(PNPO):c.520C>T (p.Gln174Ter) PNPO Feb 01, 2008 MedGen:C1864723,OMIM:610090,Orphanet:ORPHA79096 Pyridoxal 5'-phosphate-dependent epilepsy germline 17 47945963 AGCAGCCAGATTGGGGCTGTGGTCAGCCACCAGAGTTCTGTGATCCCTGATCGGGAGGTGA 118203995 16318 NM_173660.4(DOK7):c.601C>T (p.Arg201Ter) DOK7 Sep 29, 2006 MedGen:C1850792,OMIM:254300 Myasthenia, limb-girdle, familial germline 4 3485607 CAGATCAGCTTCCTGTTCGACTGCATCGTCCGAGGCATCTCCCCCACCAAGGGCCCCTTTG 137852944 19147 NM_138694.3(PKHD1):c.107C>T (p.Thr36Met) PKHD1 Aug 08, 2017 MedGen:C0085548,OMIM:263200,Orphanet:ORPHA731,SNOMED CT:28770003;MedGen:C3149111;Human Phenotype Ontology:HP:0001562,MedGen:C0079924;Human Phenotype Ontology:HP:0001405,MedGen:C1849766;Human Phenotype Ontology:HP:0000113,MedGen:C0022680;MedGen:CN517202 Autosomal recessive polycystic kidney disease;Colorectal cancer, protection against;Oligohydramnios;Periportal fibrosis;Polycystic kidney dysplasia;not provided germline;unknown 6 52083201 AACCTGAAGAAGGTAGCCTTGCAGGGGGAACGTGGATCACAGTCATTTTTGATGGTAGGTT 35103459 30028 NM_000184.2(HBG2):c.277C>T (p.His93Tyr) HBG2 May 01, 1989 MedGen:C3151421,OMIM:613977,Orphanet:ORPHA280615 Cyanosis, transient neonatal germline 11 5254330 AAGGGCACCTTTGCCCAGCTGAGTGAACTGCACTGTGACAAGCTGCATGTGGATCCTGAGA 104894675 21872 NM_016941.3(DLL3):c.712C>T (p.Arg238Ter) DLL3 Jul 01, 2003 MedGen:CN032975,OMIM:277300 Spondylocostal dysostosis 1, autosomal recessive germline 19 39504130 CATGGCTTCTGTGAACAGCCCGGTGAATGCCGATGCCTAGAGGGCTGGACTGGACCCCTCT 150539474 420284 NM_001080397.2(SLC45A1):c.731C>T (p.Ala244Val) SLC45A1 Jun 26, 2017 MedGen:CN277733,OMIM:617532 INTELLECTUAL DEVELOPMENTAL DISORDER WITH NEUROPSYCHIATRIC FEATURES germline 1 8325956 TGGTGCTGATGGACTTTAGCGCCGACTCGGCGGACAACCCCAGCCACGCCTACATGATGGA 121917993 79445 NM_006920.4(SCN1A):c.4753C>T (p.Arg1585Cys) SCN1A Sep 29, 2016 MedGen:C0014547,SNOMED CT:29753000;MedGen:CN517202 Focal epilepsy;not provided germline;unknown 2 165994212 GGAGAGTGTGTACTGAAACTCATCTCTCTACGCCATTATTATTTTACCATTGGATGGAATA 120074139 17951 NM_030962.3(SBF2):c.1459C>T (p.Arg487Ter) SBF2 Aug 10, 2004 MedGen:C1858280 Charcot-Marie-Tooth disease type 4B2 with early-onset glaucoma germline 11 9968482 GTTCCACGGCCAACAGAAGGATCCCATTTGCGAGTTCATATTCTTCCTTTCCCAGAGATTA 104894303 21931 NM_003002.3(SDHD):c.106C>T (p.Gln36Ter) SDHD Jul 25, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1868633,OMIM:168000 Hereditary cancer-predisposing syndrome;Paragangliomas 1 germline 11 112087910 GTCAGACCTGCTCATATCTCAGCATTTCTTCAGGACCGACCTATCCCAGAATGGTGTGGAG 1060502633 404533 NM_004006.2(DMD):c.8914C>T (p.Gln2972Ter) DMD Oct 31, 2016 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Duchenne muscular dystrophy germline X 31478129 CCCGTGGGCGATCTCCTCATTGACTCTCTCCAAGATCACCTCGAGAAAGTCAAGGTACCGT 1064793286 408687 NM_006009.3(TUBA1A):c.1168C>T (p.Arg390Cys) TUBA1A Feb 15, 2017 MedGen:CN517202 not provided germline 12 49185198 AACACCACAGCCATTGCTGAGGCCTGGGCTCGCCTGGACCACAAGTTTGACCTGATGTATG 886040407 261120 NM_000059.3(BRCA2):c.2137C>T (p.Gln713Ter) BRCA2 Oct 18, 2016 MedGen:C2675520,OMIM:612555 Breast-ovarian cancer, familial 2 germline 13 32336492 ACCCCAGAAGCTGATTCTCTGTCATGCCTGCAGGAAGGACAGTGTGAAAATGATCCAAAAA 148942765 185740 NM_001029.4(RPS26):c.259C>T (p.Arg87Ter) RPS26 May 19, 2015 MedGen:C2750080,OMIM:613309;MedGen:C1853576,OMIM:606164 Diamond-Blackfan anemia 10;Diamond-Blackfan anemia 15 with mandibulofacial dysostosis germline 12 56043440 TGTGCAATTCACAGCAAAGTAGTCAGGAATCGATCTCGTGAAGCCCGCAAGGACCGAACAC 387906789 264328 NM_007126.4(VCP):c.475C>T (p.Arg159Cys) VCP Jul 26, 2016 MedGen:CN517202 not provided germline 9 35065352 GGAGACATTTTTCTTGTCCGTGGTGGGATGCGTGCTGTGGAGTTCAAAGTGGTGGAAACAG 137854480 31500 NM_000138.4(FBN1):c.718C>T (p.Arg240Cys) FBN1 Aug 01, 2017 MedGen:C0265287,OMIM:102370,Orphanet:ORPHA969,SNOMED CT:254090007;MedGen:C1851286,OMIM:129600;MedGen:C1851286,OMIM:129600;MedGen:C3280054,OMIM:614185;MedGen:C1858556,OMIM:604308,Orphanet:ORPHA99715;MedGen:C4310796,OMIM:616914,Orphanet:ORPHA300382;MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:C1861456,OMIM:184900,Orphanet:ORPHA2833;MedGen:C1869115,OMIM:608328,Orphanet:ORPHA2084;MedGen:CN517202 Acromicric dysplasia;Ectopia lentis, isolated, autosomal dominant;Ectopia lentis, isolated, autosomal dominant;Geleophysic dysplasia 2;MASS syndrome;Marfan lipodystrophy syndrome;Marfan syndrome;Marfan syndrome;Stiff skin syndrome;Weill-Marchesani syndrome 2;not provided germline;unknown 15 48537629 CCCTGCCGCCGTGGCTTCATTCCAAATATCCGCACGGGAGCTTGTCAAGGTAAACCCGGGC 528961889 425309 NM_002016.1(FLG):c.7081C>T (p.Arg2361Ter) FLG Jun 13, 2017 MedGen:CN517202 not provided germline 1 152307805 GCTTCATCTGCAGTCAGAGACAGTGGACACCGAGGGTCCAGTGGTAGTCAGGCCAGTGACA 74315431 19845 NM_004738.4(VAPB):c.166C>T (p.Pro56Ser) VAPB May 01, 2012 MedGen:C1837728,OMIM:608627;MedGen:C1854059;MedGen:C1854058;MedGen:CN517202 Amyotrophic lateral sclerosis type 8;Amyotrophic lateral sclerosis, typical;Spinal muscular atrophy, late-onset, finkel type;not provided germline 20 58418318 ACTACAGCACCACGTAGGTACTGTGTGAGGCCCAACAGCGGAATCATCGATGCAGGGGCCT 111033803 36644 NM_000155.3(GALT):c.986C>T (p.Ser329Phe) GALT Dec 04, 2012 MedGen:C0268151,OMIM:230400,Orphanet:ORPHA79239,SNOMED CT:124354006 Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase not provided 9 34649491 ACGCTCATTACTACCCTCCGCTCCTGCGCTCTGCCACTGTCCGGAAATTCATGGTTGGCTA 121909515 33397 NM_000080.3(CHRNE):c.991C>T (p.Arg331Trp) CHRNE Jul 01, 1996 MedGen:C1837091,OMIM:608931 Myasthenic syndrome, congenital, associated with acetylcholine receptor deficiency germline 17 4899509 AATTGCGTCATCGTGCTCAACGTGTCCCAGCGGACGCCCACCACCCACGCCATGTCCCCGC 28937892 19551 NM_006005.3(WFS1):c.1511C>T (p.Pro504Leu) WFS1 Oct 01, 1998 MedGen:C0043207,OMIM:222300,Orphanet:ORPHA3463,SNOMED CT:70694009 Diabetes mellitus AND insipidus with optic atrophy AND deafness germline 4 6301306 GCCACCTGGTCGTCCTCAACGTCAGCGTCCCGTGCCTGCTCTATGTCTACCTGCTCTATCT 137852557 24918 NM_000451.3(SHOX):c.502C>T (p.Arg168Trp) SHOX Mar 01, 2002 MedGen:C0432230,OMIM:249700,Orphanet:ORPHA2632,SNOMED CT:38494008;MedGen:C0265309,OMIM:127300 Langer mesomelic dysplasia syndrome;Leri Weill dyschondrosteosis germline X 640836 CTGCTTCTCCCCAAGGTTTGGTTCCAGAACCGGAGAGCCAAGTGCCGCAAACAAGAGAATC 121908511 20699 NM_014946.3(SPAST):c.1495C>T (p.Arg499Cys) SPAST Sep 08, 2017 Human Phenotype Ontology:HP:0002313,MedGen:C0037771;MedGen:C1866855,OMIM:182601,Orphanet:ORPHA100985;MedGen:CN517202 Spastic paraparesis;Spastic paraplegia 4, autosomal dominant;not provided germline;unknown 2 32141905 TTCTAAAAGTGCTGGATTTTTTTTTTTAGGCGTTTCATCAAACGGGTATATGTGTCTTTAC 201766106 360156 NM_001171.5(ABCC6):c.496C>T (p.Arg166Cys) ABCC6 Mar 21, 2016 MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005;MedGen:CN517202 Pseudoxanthoma elasticum;not provided germline 16 16214428 CTCCCACAGGGCTTCCAGAGCGACCCTGTCCGCCACCTGTCCACCTACCTATGCCTGTCTC 121909636 31332 NM_023110.2(FGFR1):c.2038C>T (p.Gln680Ter) FGFR1 Nov 01, 2014 Human Phenotype Ontology:HP:0000823,MedGen:C1838105;MedGen:C1563720,OMIM:147950 Delayed puberty;Kallmann syndrome 2 germline;unknown 8 38414569 GAGGCATTATTTGACCGGATCTACACCCACCAGAGTGATGTGTGAGTTTGTAATAGCAATT 12156163 426530 NM_002052.4(GATA4):c.1146+177C>T GATA4 Jan 07, 2017 MedGen:C0152021,SNOMED CT:13213009 Congenital heart disease unknown 8 11757260 ATTGAGCTGTGTGGTGCCCTCAGGGCCGCACGAGGCTAGGGGCATCTGCATCGGGCTGTAT 587784117 168183 NM_022455.4(NSD1):c.4417C>T (p.Arg1473Ter) NSD1 Sep 13, 2015 MedGen:CN035106,OMIM:117550;MedGen:CN517202 Sotos syndrome 1;not provided germline 5 177246716 AAGATATTTGACAAGCCAAGGAAGCGAAAACGACAGAGGCATGCTGCAGCCAAGATGCAGT 398123036 70523 NM_015340.3(LARS2):c.1886C>T (p.Thr629Met) LARS2 Apr 04, 2013 MedGen:C3809105,OMIM:615300 Perrault syndrome 4 germline 3 45516118 ATCTAGGTTCCGTTCCTGTTCATGCAAAAACGAAAGAGAAGTTAGAGGTGACGTGGGAGAA 80356777 76548 NM_001876.3(CPT1A):c.1069C>T (p.Arg357Trp) CPT1A Mar 07, 2013 MedGen:C0342789,OMIM:255120,SNOMED CT:238001003 Carnitine palmitoyltransferase I deficiency not provided 11 68784909 CTCTACCATGATGGGCGGCTGCTGAAGCCCCGGGAGATGGAGCAGCAGATGCAGAGGATCC 140986055 40097 NM_174917.4(ACSF3):c.728C>T (p.Pro243Leu) ACSF3 Aug 14, 2011 MedGen:C3280314,OMIM:614265,Orphanet:ORPHA289504 Combined malonic and methylmalonic aciduria germline 16 89102665 CCAAAGACGACGTGATCCTCCACGTGCTCCCGCTGCACCACGTCCATGGTGTGGTCAACGC 397514636 48580 NM_001080463.1(DYNC2H1):c.7486C>T (p.Pro2496Ser) DYNC2H1 Feb 20, 2013 MedGen:C2751311,OMIM:613091,SNOMED CT:254051008 Short-rib thoracic dysplasia 3 with or without polydactyly germline 11 103191565 GTTGATGATTATAGTCACTATTTCTTTACTCCTTGCATTCTTACCCAATGGGTTCTTGGCT 587776498 166207 NM_004092.3(ECHS1):c.5C>T (p.Ala2Val) ECHS1 Feb 03, 2017 MedGen:C0023264,OMIM:256000,Orphanet:ORPHA506,SNOMED CT:29570005;MedGen:C4225391,OMIM:616277;MedGen:CN517202 Leigh syndrome;Mitochondrial short-chain enoyl-coa hydratase 1 deficiency;not provided germline;maternal 10 133373329 GGGCCGGGCGAGGAGTCCAGAGAGCCATGGCCGCCCTGCGTGTCCTGCTGTCCTGCGTCCG 137852217 25747 NM_152424.3(AMER1):c.1072C>T (p.Arg358Ter) AMER1 Oct 10, 2017 MedGen:C0432268,OMIM:300373,Orphanet:ORPHA2780,SNOMED CT:254129003;MedGen:CN517202 Osteopathia striata with cranial sclerosis;not provided germline;unknown X 64192215 GGCCAGAGAGCAAACCGAGATGGGACCAAGCGAAGTTCCTGCCTGGTGACCTACCAAGGAG 587783971 168440 NM_133433.3(NIPBL):c.5335C>T (p.Arg1779Ter) NIPBL Feb 08, 2013 MedGen:CN029798,OMIM:122470 Cornelia de Lange syndrome 1 germline 5 37022057 AAAATGTCAATGTTTGCTTGGCAGATCCTACGAGTTCTTGGTGAAAATGCAATTGCTGTTC 267607994 96356 NM_000251.2(MSH2):c.2087C>T (p.Pro696Leu) MSH2 Sep 04, 2015 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:CN169374 Hereditary cancer-predisposing syndrome;Lynch syndrome;not specified germline 2 47476448 TACTCATGGCCCAAATTGGGTGTTTTGTGCCATGTGAGTCAGCAGAAGTGTCCATTGTGGA 794727924 196027 NM_014795.3(ZEB2):c.2701C>T (p.Gln901Ter) ZEB2 Jun 04, 2014 MedGen:C1856113,OMIM:235730,Orphanet:ORPHA2152 Mowat-Wilson syndrome germline 2 144398486 GCCAAACCTTTATACACAGCTCTTCCACCTCAAAGCGCATTTCCCCCTGCTACTTTCATGC 312262863 49478 NM_003611.2(OFD1):c.1099C>T (p.Arg367Ter) OFD1 Feb 28, 2013 MedGen:C1510460,OMIM:311200,Orphanet:ORPHA2750,SNOMED CT:52868006 Oral-facial-digital syndrome not provided X 13753411 CTGAAGGATGACTACATCATTAGAACTAATCGACTGATTGAAGATGAAAGGAAGAATAAAG 587780070 133272 NM_000546.5(TP53):c.535C>T (p.His179Tyr) TP53 May 11, 2017 Human Phenotype Ontology:HP:0004808,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:ORPHA519,SNOMED CT:17788007;Human Phenotype Ontology:HP:0030078,MeSH:C538231,MedGen:C0152013;MedGen:C0278701;Human Phenotype Ontology:HP:0011459,MedGen:C0152018,Orphanet:ORPHA70482;MedGen:C0235782;MeSH:D015179,MedGen:CN236642;Human Phenotype Ontology:HP:0100843,MeSH:D005909,MedGen:C0017636,SNOMED CT:63634009;MedGen:C2239176,OMIM:114550,Orphanet:ORPHA88673,SNOMED CT:187769009,SNOMED CT:25370001;MedGen:C0085390,Orphanet:ORPHA524,SNOMED CT:428850001;MeSH:C562393,MedGen:C0151779,SNOMED CT:93655004;MedGen:C0153574,Orphanet:ORPHA213569;Human Phenotype Ontology:HP:0030692,MeSH:D001932,MedGen:C0006118,SNOMED CT:126952004;Human Phenotype Ontology:HP:0100013,MeSH:D001943,MedGen:C1458155,Orphanet:ORPHA180250,SNOMED CT:126926005;MedGen:C0279663;Human Phenotype Ontology:HP:0006725,MedGen:C0281361;Gene:7864,Human Phenotype Ontology:HP:0030357,MeSH:D055752,MedGen:C0149925,OMIM:182280,Orphanet:ORPHA70573;Human Phenotype Ontology:HP:0030359,MedGen:C0149782;MeSH:C535575,MedGen:C1168401,OMIM:275355,Orphanet:ORPHA67037;Human Phenotype Ontology:HP:0006739,MedGen:C0553723;MedGen:C0280630;MedGen:CN517202 Acute myeloid leukemia;Adenocarcinoma of lung;Adenocarcinoma of stomach;Carcinoma of esophagus;Carcinoma of gallbladder;Colorectal Neoplasms;Glioblastoma;Hepatocellular carcinoma;Li-Fraumeni syndrome;Malignant melanoma of skin;Malignant neoplasm of body of uterus;Neoplasm of brain;Neoplasm of the breast;Ovarian Serous Cystadenocarcinoma;Pancreatic adenocarcinoma;Small cell lung cancer;Squamous cell carcinoma of lung;Squamous cell carcinoma of the head and neck;Squamous cell carcinoma of the skin;Uterine Carcinosarcoma;not provided germline;somatic 17 7675077 ATGACGGAGGTTGTGAGGCGCTGCCCCCACCATGAGCGCTGCTCAGATAGCGATGGTGAGC 137853590 28667 NM_000294.2(PHKG2):c.130C>T (p.Arg44Ter) PHKG2 Jan 01, 1998 MedGen:C2751643,OMIM:613027,Orphanet:ORPHA264580 Glycogen storage disease IXc germline 16 30751140 GTGAGCTCTGTGGTCCGCCGTTGTGTTCATCGAGCTACTGGCCACGAGTTTGCGGTGAAGA 786205215 188056 NM_017763.5(RNF43):c.394C>T (p.Arg132Ter) RNF43 Jul 19, 2017 MedGen:C3272797;MedGen:C4310714,OMIM:617108 Colon Serrated Polyposis;Sessile serrated polyposis cancer syndrome germline 17 58363582 GTGCCTCTGCAGGCTCGGATGGCGGGTGAGCGAGGAGCCAGTGCTGTCCTCTTTGACATCA 80338878 34227 NM_003227.3(TFR2):c.313C>T (p.Arg105Ter) TFR2 Jun 09, 2011 MedGen:C1858664,OMIM:604250,Orphanet:ORPHA225123 Hemochromatosis type 3 not provided 7 100640846 CCAGCCTTCCTACTGGGCTACGTCGCCTTCCGAGGGTCCTGCCAGGCGTGCGGAGACTCTG 137854440 15814 NM_198488.3(FAM83H):c.2029C>T (p.Gln677Ter) FAM83H Jan 01, 2012 MedGen:C0399376,OMIM:130900,Orphanet:ORPHA100032,SNOMED CT:109471001 Amelogenesis imperfecta, hypocalcification type germline 8 143727432 TCATTCCGCTCGCGCCTGAACCCCCTGGTCCAGCGCAGCTCCAGGCTGCGCTCCTCGCTCA 387906993 39702 NM_133468.4(BMPER):c.1109C>T (p.Pro370Leu) BMPER Oct 08, 2010 MedGen:C1842691,OMIM:608022,Orphanet:ORPHA66637 Diaphanospondylodysostosis germline 7 34078887 AGCCCGGCGTTTGCACGGTGTTTGGAGATCCCCACTACAACACTTTTGACGGTCGGACATT 756949497 213871 NM_004006.2(DMD):c.2797C>T (p.Gln933Ter) DMD May 13, 2016 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Duchenne muscular dystrophy germline X 32484925 TCTGATGTGCAGGCCAGAGAGAAAGAGCTACAGACAAGTAAGTAAAAAGCCTAAAATGGCT 267606883 24710 m.6328C>T MT-CO1 Mar 01, 2006 MedGen:CN069330 Cytochrome c oxidase i deficiency germline MT 6328 TAGCAGGGAACTACTCCCACCCTGGAGCCTCCGTAGACCTAACCATCTTCTCCTTACACCT 587777197 106831 NM_006612.5(KIF1C):c.2191C>T (p.Arg731Ter) KIF1C Mar 06, 2014 MedGen:C1969796,OMIM:611302,Orphanet:ORPHA397946 Ataxia, spastic, 2, autosomal recessive germline 17 5022272 GCCCCTCGCAGGGTTTATCAGATCCCCCAGCGACGCAGGCTGCAGGGCAAAGACCCCCGCT 886039677 260233 NM_000516.5(GNAS):c.784C>T (p.Gln262Ter) GNAS Jun 21, 2016 MedGen:CN517202 not provided germline 20 58909749 AGCTACAACATGGTCATCCGGGAGGACAACCAGACCAACCGCCTGCAGGAGGCTCTGAACC 886039044 258630 NM_004281.3(BAG3):c.481C>T (p.Gln161Ter) BAG3 Jun 19, 2015 MedGen:CN230736 Cardiovascular phenotype germline 10 119670151 TGTGGACAGGTGGCAGCGGCGGCGGCAGCCCAGCCCCCAGCCTCCCACGGACCTGAGGTAA 1057520764 378246 NM_004006.2(DMD):c.5758C>T (p.Gln1920Ter) DMD Apr 18, 2017 MedGen:CN517202 not provided germline X 32342264 TTTGCTCAATAGGAAATTGATCGGGAATTGCAGAAGAAGAAAGAGGAGCTGAATGCAGTGC 1114167424 414713 NM_177973.1(SULT2B1):c.446C>T (p.Pro149Leu) SULT2B1 Jul 13, 2017 MedGen:C3536797,OMIM:242300;MedGen:CN317536,OMIM:617571 Autosomal recessive congenital ichthyosis 1;ICHTHYOSIS, CONGENITAL, AUTOSOMAL RECESSIVE 14 germline 19 48591631 GCACACAGGTGATCTACATGGGCCGCAACCCCCGGGACGTTGTGGTCTCCCTCTATCATTA 118204031 16534 NM_001039141.2(TRIOBP):c.3349C>T (p.Arg1117Ter) TRIOBP Jan 01, 2006 MedGen:C1853276,OMIM:609823 Deafness, autosomal recessive 28 germline 22 37725905 CAGCTCCCTGCACCTGTGTGTATTGGGTACCGAGATGCACCCCGGGCCTCCTCCCCACCAC 137852448 25330 NM_000132.3(F8):c.5677C>T (p.Gln1893Ter) F8 Nov 01, 1993 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154904434 AACCCTGCTCATGGGAGACAAGTGACAGTACAGGAATTTGCTCTGTTTTTCACCATCTTTG 1057520565 377926 NM_013275.5(ANKRD11):c.7138C>T (p.Gln2380Ter) ANKRD11 Apr 04, 2015 MedGen:CN517202 not provided germline 16 89279404 AAGGCCCGCGGCTCCGAGGACGACGACGCCCAGGCCCAGCATCCGCGCAAACGCCGCTTTC 1057518204 360481 NM_001396.4(DYRK1A):c.349C>T (p.Arg117Ter) DYRK1A Nov 07, 2016 MedGen:C3279839,OMIM:614104,Orphanet:ORPHA464306;MedGen:CN517202 Mental retardation, autosomal dominant 7;not provided germline 21 37480659 TCATTTCAGGTTTACTATGCAAAAAAGAAGCGAAGACACCAACAGGGCCAGGGAGACGATT 587784386 170180 NM_006517.4(SLC16A2):c.277C>T (p.Gln93Ter) SLC16A2 Feb 08, 2013 MedGen:C0795889,OMIM:300523,Orphanet:ORPHA59 Allan-Herndon-Dudley syndrome germline X 74421914 GTAGAGACCCGCGGCACCGCGCGCGGCTTCCAGCCTCCCGAAGGTGGCTTCGGCTGGGTGG 1064793483 408534 NM_015335.4(MED13L):c.2524C>T (p.Arg842Ter) MED13L Apr 16, 2015 MedGen:CN517202 not provided germline 12 116003048 TCAAAAATGCCTGCAGTTGGGACAGAAGACCGACCTCTTGGGAAGGATGGAAGAGCTGCTG 587776976 59814 NM_001242896.1(DEPDC5):c.715C>T (p.Arg239Ter) DEPDC5 Apr 13, 2016 Gene:50987,MedGen:C1858477,OMIM:604364;MedGen:CN517202 Epilepsy, familial focal, with variable foci 1;not provided germline;unknown 22 31792765 TCTATTTCAGATGAATTTCCTGAAATAAACCGAGCCTCAATTCGACAGGATCACAAGGGGA 797045057 205743 NM_022455.4(NSD1):c.5950C>T (p.Arg1984Ter) NSD1 Sep 01, 2014 MedGen:CN035106,OMIM:117550 Sotos syndrome 1 de novo 5 177282522 GAGCTTATAGATGAAGAAGAATGCAGAGCTCGAATTCGCTATGCTCAAGAACATGATATCA 121434491 23111 NM_001039348.2(EFEMP1):c.1033C>T (p.Arg345Trp) EFEMP1 Dec 01, 2011 MedGen:C1832174,OMIM:126600;MedGen:C1852020 Doyne honeycomb retinal dystrophy;Malattia leventinese germline 2 55871091 ATAAATGAGTGTGAGACCACAAATGAATGCCGGGAGGATGAAATGTGTTGGAATTATCATG 121909660 31284 NM_000145.3(FSHR):c.1717C>T (p.Arg573Cys) FSHR Oct 01, 1998 MedGen:C0949595,OMIM:233300 Ovarian dysgenesis 1 germline 2 48963104 TCCTCCTCTAGTGACACCAGGATCGCCAAGCGCATGGCCATGCTCATCTTCACTGACTTCC 786204022 185775 NM_005957.4(MTHFR):c.1060C>T (p.His354Tyr) MTHFR - MedGen:C1856058,OMIM:236250 Homocysteinemia due to MTHFR deficiency germline 1 11794835 AGGCGTCCCCTACCCTGGGCTCTCAGCGCCCACCCCAAGCGCCGAGAGGAAGATGTACGTC 863223998 210690 NM_000143.3(FH):c.736C>T (p.Gln246Ter) FH Oct 17, 2017 MedGen:CN517202 not provided germline 1 241508605 ACTCAGGATGCTGTTCCACTTACTCTTGGGCAGGTATAGGAGTTTGACTAATTTGATTCAA 137852981 19794 NM_014795.3(ZEB2):c.2083C>T (p.Arg695Ter) ZEB2 May 18, 2017 MedGen:C1856113,OMIM:235730,Orphanet:ORPHA2152;MedGen:CN517202 Mowat-Wilson syndrome;not provided germline;unknown 2 144399104 CAGGAATTTGTGAAGGAATGGTTTGAACAACGAAAAGTCTACCAGTACTCAAATTCCAGGT 63750355 16694 NM_014043.3(CHMP2B):c.493C>T (p.Gln165Ter) CHMP2B Oct 04, 2012 MedGen:C1833296,OMIM:600795;MedGen:CN517202 Frontotemporal Dementia, Chromosome 3-Linked;not provided germline 3 87253472 GACGAAGAAGAAAGCCAGGATATTGTGAATCAAGTTCTTGATGAAATTGGAATTGAAATTT 121918338 18445 NM_052813.4(CARD9):c.883C>T (p.Gln295Ter) CARD9 Oct 29, 2009 MedGen:C1859353,OMIM:212050,Orphanet:ORPHA457088 Candidiasis, familial, 2 germline 9 136370362 GAGGACTGGCGGCAGGCGCTGCGGGACCACCAGGAGCAGGCCAACACCATCTTCTCCCTGC 137852888 17820 NM_000158.3(GBE1):c.1570C>T (p.Arg524Ter) GBE1 Apr 06, 2017 MedGen:C1856305,Orphanet:ORPHA308698;MedGen:C1856301;MedGen:C0017923,OMIM:232500,SNOMED CT:11179002;MedGen:CN517202 Glycogen storage disease IV, childhood neuromuscular;Glycogen storage disease IV, classic hepatic;Glycogen storage disease, type IV;not provided germline 3 81577973 GATCGTGGAATACAGCTTCATAAAATGATTCGACTCATTACGCATGGGCTTGGTGGAGAAG 121909077 22402 NM_003322.5(TULP1):c.1444C>T (p.Arg482Trp) TULP1 Jul 01, 2007 MedGen:C1838603,OMIM:600132 Retinitis pigmentosa 14 germline 6 35500032 AGTGGCTCCTACACCCTCAACTTCCAAGGCCGGGTCACCCAGGCCTCAGTCAAGAACTTCC 886041447 265117 NM_001849.3(COL6A2):c.244C>T (p.Gln82Ter) COL6A2 Dec 31, 2015 MedGen:CN517202 not provided germline 21 46112107 CAGTTCGTGCCGCAGTTCATCAGCCAGCTGCAGAACGAGTTCTACCTGGACCAGGTGGCGC 149682171 192124 NM_007171.3(POMT1):c.1958C>T (p.Pro653Leu) POMT1 Apr 17, 2015 MedGen:CN033898,OMIM:236670 Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type a, 1 germline 9 131522113 GTGCCGGTGGCTGGGCAGTGAACTACCTCCCGTTCTTCCTGATGGAGAAGACACTCTTCCT 886040313 261984 NM_007294.3(BRCA1):c.718C>T (p.Gln240Ter) BRCA1 Oct 18, 2016 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome germline 17 43094813 GAGACGGATGTAACAAATACTGAACATCATCAACCCAGTAATAATGATTTGAACACCACTG 28730837 18669 NM_000250.1(MPO):c.995C>T (p.Ala332Val) MPO May 01, 2004 MedGen:C0398595,OMIM:254600,Orphanet:ORPHA2587,SNOMED CT:129644003,SNOMED CT:234433009 Myeloperoxidase deficiency germline 17 58278036 GCAACATCACCATCCGCAACCAGATCAACGCGCTCACTTCCTTCGTGGACGCCAGCATGGT 777202372 263881 NM_030813.5(CLPB):c.748C>T (p.Arg250Ter) CLPB Sep 14, 2016 MedGen:C4225393,OMIM:616271,Orphanet:ORPHA445038 3-methylglutaconic aciduria with cataracts, neurologic involvement, and neutropenia germline 11 72358997 TGTGTTGCTGTCTCCCCAGTCCTGATCACCCGAGAGGATGACTTCAACAACAGGCTGAACA 141026028 197110 NM_004415.3(DSP):c.6496C>T (p.Arg2166Ter) DSP Aug 16, 2016 MedGen:CN517202 not provided germline 6 7583758 AGAGATTTGTATCGATCCCTGAATGATCCCCGAGATAGTCAGAAAAACTTTGTGGATCCAG 886039453 259731 NM_025216.2(WNT10A):c.742C>T (p.Arg248Ter) WNT10A Jul 04, 2016 MedGen:CN517202 not provided germline 2 218890349 ATCCACGCGAGAATGAGGCTTCACAACAACCGAGTTGGGAGGCAGGTGAGAGCCCCACCCC 753242774 362139 NM_138615.2(DHX30):c.2344C>T (p.Arg782Trp) DHX30 Dec 18, 2017 Human Phenotype Ontology:HP:0002353,MedGen:C0151611;Human Phenotype Ontology:HP:0001508,MedGen:C0231246;Human Phenotype Ontology:HP:0001290,MedGen:C1858120;Human Phenotype Ontology:HP:0001263,MedGen:C4020875;Human Phenotype Ontology:HP:0001007,MedGen:C0019572;Human Phenotype Ontology:HP:0001249,MedGen:C1843367;Human Phenotype Ontology:HP:0000252,MedGen:C0424688;MedGen:CN703736,OMIM:617804;Human Phenotype Ontology:HP:0004322,MedGen:C0349588 EEG abnormality;Failure to thrive;Generalized hypotonia;Global developmental delay;Hirsutism;Intellectual disability;Microcephaly;NEURODEVELOPMENTAL DISORDER WITH SEVERE MOTOR IMPAIRMENT AND ABSENT LANGUAGE;Short stature de novo;germline 3 47848237 TCAAGAGCCAATGTGATCCAGCGCCGGGGCCGGGCGGGCCGCTGCCAGTCCGGCTTTGCCT 886039818 260580 NM_000812.3(GABRB1):c.860C>T (p.Thr287Ile) GABRB1 Oct 12, 2016 MedGen:C4310691,OMIM:617153 Epileptic encephalopathy, early infantile, 45 germline 4 47406706 TCACAGGAATCACGACAGTGCTTACAATGACAACCATCAGCACCCACCTCAGGGAGACCCT 989552169 454701 NM_032446.2(MEGF10):c.3166C>T (p.Arg1056Ter) MEGF10 Oct 31, 2016 MedGen:C3280679,OMIM:614399,Orphanet:ORPHA439212 Myopathy, areflexia, respiratory distress, and dysphagia, early-onset germline 5 127455541 TGTGGTTATGTGGAGATGAAATCGCCGGCACGAAGAGATTCCCCATATGCAGAGATCAATA 387906896 39411 NM_015331.2(NCSTN):c.349C>T (p.Arg117Ter) NCSTN Nov 19, 2010 MedGen:CN028850,OMIM:142690 Familial acne inversa 1 germline 1 160349583 TTAATGGAGAAGCTGAAAGGGAGAACCAGCCGAATTGCTGGTCTTGCAGTGTCCTTGACCA 387907232 44209 NM_012343.3(NNT):c.1598C>T (p.Ala533Val) NNT Jul 20, 2012 MedGen:C3553587,OMIM:614736 Glucocorticoid deficiency 4 with or without mineralocorticoid deficiency germline 5 43649300 TCCACTCACCACTGATGTCTGTGACAAATGCAATCTCAGGTTTGTTCCTCTCTTGTTTTTC 193922415 45572 NM_000377.2(WAS):c.37C>T (p.Arg13Ter) WAS Aug 18, 2011 MedGen:C0043194,OMIM:277970,OMIM:301000,Orphanet:ORPHA906,SNOMED CT:36070007 Wiskott-Aldrich syndrome germline X 48683890 GGGGGCCCAATGGGAGGAAGGCCCGGGGGCCGAGGAGCACCAGCGGTTCAGCAGAACATAC 121909086 22349 NM_004560.3(ROR2):c.613C>T (p.Arg205Ter) ROR2 Aug 01, 2000 MedGen:C1849334,OMIM:268310,Orphanet:ORPHA1507 Robinow syndrome, autosomal recessive germline 9 91737400 TCGCTTCAGATGCAGGGGGAGATTGAAAACCGAATCACAGGTAGGAGCTGCAGACCTTTCT 864309727 216028 NM_172250.2(MMAA):c.358C>T (p.Gln120Ter) MMAA Jan 07, 2016 MedGen:C1855109,OMIM:251100,Orphanet:ORPHA79310 Methylmalonic aciduria cblA type germline 4 145639497 TCAACTCACAGCAGGAAAAAGGAGTTAGCCCAGGTGCTTCTTCAGAAAGTATTACTTTACC 730880699 179188 NM_000256.3(MYBPC3):c.3553C>T (p.Gln1185Ter) MYBPC3 Jun 23, 2015 MedGen:CN517202 not provided germline 11 47332640 CTGGACTTCTCCGAGGCCCCAAGCTTCACCCAGCCCCTGGTGAACCGCTCGGTCATCGCGG 72551316 76803 NM_000784.3(CYP27A1):c.745C>T (p.Gln249Ter) CYP27A1 Aug 01, 2013 MedGen:C0238052,OMIM:213700,Orphanet:ORPHA909,SNOMED CT:63246000 Cholestanol storage disease not provided 2 218812650 ACCTTCGTCAGATCCATCGGGTTAATGTTCCAGAACTCACTCTATGCCACCTTCCTCCCCA 121913413 32626 NM_001904.3(CTNNB1):c.122C>T (p.Thr41Ile) CTNNB1 May 31, 2016 Human Phenotype Ontology:HP:0030078,MeSH:C538231,MedGen:C0152013;MedGen:C0007112;Human Phenotype Ontology:HP:0006744,MeSH:D018268,MedGen:C0206686,Orphanet:ORPHA1501;MeSH:D015179,MedGen:CN236642;MedGen:C2239176,OMIM:114550,Orphanet:ORPHA88673,SNOMED CT:187769009,SNOMED CT:25370001;MeSH:C562393,MedGen:C0151779,SNOMED CT:93655004;MedGen:C0153574,Orphanet:ORPHA213569;Human Phenotype Ontology:HP:0006725,MedGen:C0281361;Human Phenotype Ontology:HP:0030434,MeSH:D018296,MedGen:C0206711,OMIM:132600,Orphanet:ORPHA91414 Adenocarcinoma of lung;Adenocarcinoma of prostate;Adrenocortical carcinoma;Colorectal Neoplasms;Hepatocellular carcinoma;Malignant melanoma of skin;Malignant neoplasm of body of uterus;Pancreatic adenocarcinoma;Pilomatrixoma somatic 3 41224634 TGGACTCTGGAATCCATTCTGGTGCCACTACCACAGCTCCTTCTCTGAGTGGTAAAGGCAA 757797994 481990 NM_000448.2(RAG1):c.2689C>T (p.Arg897Ter) RAG1 Jul 19, 2017 MedGen:CN517202 not provided germline 11 36575993 GATCTTTACCTGAAGATGAAACCAGTATGGCGATCATCATGCCCTGCTAAAGAGTGCCCAG 587784050 168520 NM_133433.3(NIPBL):c.7849C>T (p.Gln2617Ter) NIPBL Feb 08, 2013 MedGen:CN029798,OMIM:122470 Cornelia de Lange syndrome 1 germline 5 37061007 ACAGAAGAGGTGAAAAGGAGTATAGTAAAACAGTATCTAGATGTGAGTAGTAAAACCAAAA 132630310 26072 NM_001399.4(EDA):c.67C>T (p.Gln23Ter) EDA Feb 01, 1998 MedGen:C0162359,OMIM:305100,SNOMED CT:239007005 Hypohidrotic X-linked ectodermal dysplasia germline X 69616375 CCTGCAGCAGCGCCGCGGGAGCGAGGGAGCCAGGGCTGCGGGTGTGGCGGGGCCCCTGCCC 794728808 196747 NM_001035.2(RYR2):c.14704C>T (p.Pro4902Ser) RYR2 Aug 07, 2012 MedGen:CN517202 not provided germline 1 237830578 GGGATAGGCAATGATTACTTCGACACAGTGCCACATGGCTTTGAAACCCACACTTTACAGG 281865493 47591 NM_004614.4(TK2):c.388C>T (p.Arg130Trp) TK2 Dec 06, 2012 MedGen:C3149750,OMIM:609560 Mitochondrial DNA depletion syndrome 2 not provided 16 66529055 CTTTTTGTTTTCCTTTAGGTGTCATCTGTACGGTTGATGGAGAGGTCGATTCACAGCGCAA 727503845 177445 NM_033018.3(CDK16):c.1258C>T (p.Arg420Ter) CDK16 Mar 13, 2014 MedGen:CN517202 not provided germline X 47227098 CGAGCCGAGGCCCTTTTGAGCCACGCACCCCGGTGAGGCTGGTGGGTGGGTGGGCGTTAGG 886041677 264170 NM_015175.2(NBEAL2):c.3592C>T (p.Gln1198Ter) NBEAL2 Apr 08, 2016 MedGen:CN517202 not provided germline 3 46999363 CAGAATGAGCGGCTACCTGAGCGGAGCCGCCAGCGCCTCCGGCTGCGGGAGTGTGGTCTCC 536907995 137626 NM_007194.3(CHEK2):c.58C>T (p.Gln20Ter) CHEK2 Jun 05, 2017 MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202;MedGen:CN169374 Familial cancer of breast;Hereditary cancer-predisposing syndrome;not provided;not specified germline;unknown 22 28734664 CAGCAGTCTCATGGCAGCAGTGCCTGTTCACAGCCCCATGGCAGCGTTACCCAGTCCCAAG 796052812 203921 NM_001184880.1(PCDH19):c.1114C>T (p.Arg372Trp) PCDH19 Apr 24, 2014 MedGen:CN517202 not provided germline X 100407484 GCCCCCCCGGGCTACGTGATCGCCTTGGTGCGGGTGTCTGATCGCGACTCAGGCCTCAATG 863224074 210808 NM_002437.4(MPV17):c.370C>T (p.Gln124Ter) MPV17 Feb 11, 2015 MedGen:CN517202 not provided germline 2 27312499 CTGTCAGCCCAGGACAACTGGGCCAAACTACAGCGGGTGAGCTGGGCAGGTGTGGAGAATG 199476205 47864 NM_207352.3(CYP4V2):c.1526C>T (p.Pro509Leu) CYP4V2 Apr 12, 2012 MedGen:C1859486,OMIM:210370,Orphanet:ORPHA41751 Bietti crystalline corneoretinal dystrophy not provided 4 186210589 TTGGTCTAGAAGGACAGTTGATTCTTCGTCCAAGTAATGGCATCTGGATCAAGTTGAAGAG 199925463 38823 NM_002875.4(RAD51):c.760C>T (p.Arg254Ter) RAD51 Dec 20, 2017 MedGen:C3281089,OMIM:614508 Mirror movements 2 germline 15 40729620 CACTTGGCCAGGTTTCTGCGGATGCTTCTGCGACTCGCTGATGAGGTAAGTTGTGGGATAG 878854407 227839 NM_177433.2(MAGED2):c.1336C>T (p.Arg446Cys) MAGED2 Sep 23, 2016 MedGen:C4310820,OMIM:300971 Bartter syndrome, type 5, antenatal, transient germline X 54814725 CCCCCTGAATATGAGTTCTTCTGGGGCCTGCGCTCTTACTATGAGACCAGCAAGATGAAAG 61753256 105454 NM_000372.4(TYR):c.346C>T (p.Arg116Ter) TYR Mar 20, 2017 MedGen:C0268494,OMIM:203100,Orphanet:ORPHA79431,SNOMED CT:6483008;MedGen:CN517202 Tyrosinase-negative oculocutaneous albinism;not provided germline 11 89178299 GGCTTTTGGGGACCAAACTGCACAGAGAGACGACTCTTGGTGAGAAGAAACATCTTCGATT 187558439 244305 NM_002977.3(SCN9A):c.4462C>T (p.Arg1488Ter) SCN9A Jun 05, 2015 MedGen:CN517202 not provided germline 2 166204368 GGGTCCAAGAAGCCACAAAAGCCAATTCCTCGACCAGGGGTAAAAAAATATATATATCTTT 397514539 48181 NM_152269.4(C12orf65):c.394C>T (p.Arg132Ter) C12orf65 Jan 27, 2013 MedGen:C3539506,OMIM:615035,Orphanet:ORPHA320375 Spastic paraplegia 55, autosomal recessive germline 12 123256924 GGTGAAAACAGTCCTGTTCACAAAGAAAAACGAGAAGCGGCGAAGAAAAAACAAGAAAGGA 397514652 48690 NM_000693.3(ALDH1A3):c.265C>T (p.Arg89Cys) ALDH1A3 Feb 07, 2013 MedGen:C3554524,OMIM:615113 Microphthalmia, isolated 8 germline 15 100887632 CAGGTTGCCTTCCAGAGGGGCTCGCCATGGCGCCGGCTGGATGCCCTGAGTCGTGGGCGGC 267606992 16640 NM_030916.2(NECTIN4):c.554C>T (p.Thr185Met) NECTIN4 Aug 13, 2010 MedGen:C3150807,OMIM:613573,Orphanet:ORPHA247820 Ectodermal dysplasia-syndactyly syndrome 1 germline 1 161077629 GCAGCCCAGCCCCCAGCGTGACCTGGGACACGGAGGTCAAAGGCACAACGTCCAGCCGTTC 397508336 68102 NM_000492.3(CFTR):c.2053C>T (p.Gln685Ter) CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline 7 117592220 GCTCCTGTCTCCTGGACAGAAACAAAAAAACAATCTTTTAAACAGACTGGAGAGTTTGGGG 28928901 29531 NM_005572.3(LMNA):c.664C>T (p.His222Tyr) LMNA Jan 17, 2013 MedGen:C0410190,OMIM:181350,Orphanet:ORPHA98853,SNOMED CT:240072005;MedGen:C2750035,OMIM:616516,Orphanet:ORPHA98855;MedGen:CN517202 Benign scapuloperoneal muscular dystrophy with cardiomyopathy;Emery-Dreifuss muscular dystrophy 3, autosomal recessive;not provided germline 1 156134829 TTCCAGGAGCTGCGTGAGACCAAGCGCCGTCATGAGACCCGACTGGTGGAGATTGACAATG 886038916 258019 NM_133378.4(TTN):c.81313C>T (p.Arg27105Ter) TTN Feb 06, 2017 MedGen:CN230736;MedGen:CN517202 Cardiovascular phenotype;not provided germline 2 178554094 AGTGATATAAGTGGCTATTTCCTTGAAAAACGAGACAAGAAGAGCCTAGGATGGTTTAAAG 796053004 201506 NM_001165963.1(SCN1A):c.3985C>T (p.Arg1329Ter) SCN1A Oct 24, 2014 MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002;MedGen:CN517202 Severe myoclonic epilepsy in infancy;not provided germline 2 166009736 AGAGCTCTGAGACCTCTAAGAGCCTTATCTCGATTTGAAGGGATGAGGGTAAGAAAAATGA 118192172 28003 NM_000540.2(RYR1):c.1840C>T (p.Arg614Cys) RYR1 Aug 08, 2017 MedGen:CN031421,OMIM:145600;MedGen:CN239331;MedGen:CN517202 Malignant hyperthermia, susceptibility to, 1;RYR1-Related Disorders;not provided germline;unknown 19 38457545 TCCCTGTGTGTGTGTAATGGTGTGGCTGTACGCTCCAACCAAGATCTTATTACTGAGAACT 780953224 458486 NM_017780.3(CHD7):c.1735C>T (p.Gln579Ter) CHD7 Apr 27, 2017 MedGen:C0265354,OMIM:214800,Orphanet:ORPHA138,SNOMED CT:47535005 CHARGE association germline 8 60781069 GATATGACTCAGGTTAGTGGACCGAATGCTCAGCTAGTGAAGAGTGATGATTACCTGCCAT 879255639 247538 NM_001458.4(FLNC):c.4871C>T (p.Ser1624Leu) FLNC Jul 21, 2016 MedGen:CN237821 Cardiomyopathy, familial restrictive, 5 germline 7 128848926 TCAAGTATGGCGGTGATGAGATCCCCTACTCGCCCTTCCGCATCCATGCTCTGCCCACTGG 199867882 152869 NM_016247.3(IMPG2):c.3262C>T (p.Arg1088Ter) IMPG2 Oct 31, 2017 Human Phenotype Ontology:HP:0000547,MeSH:D012174,MedGen:C0035334,OMIM:268000,Orphanet:ORPHA791,SNOMED CT:28835009;MedGen:CN517202 Retinitis pigmentosa;not provided germline 3 101231117 AGGTGCCGGGTGGGTGAGAACTGGTGGTACCGAGGCAAGCACTGTGAGGAATTTGTGTCTG 137854583 15878 NM_000038.5(APC):c.622C>T (p.Gln208Ter) APC Jul 07, 2016 MedGen:C0017097,Orphanet:ORPHA79665,SNOMED CT:60876000;MedGen:C0027672,SNOMED CT:699346009 Gardner syndrome;Hereditary cancer-predisposing syndrome germline;unknown 5 112780880 GTTGCGATGGAAGAACAACTAGGTACCTGCCAGGATATGGAAAAACGAGCACAGGTAAGTT 121909717 31208 NM_002055.4(GFAP):c.1246C>T (p.Arg416Trp) GFAP Oct 25, 2017 MedGen:C0270726,OMIM:203450,Orphanet:ORPHA58,SNOMED CT:81854007;MedGen:CN517202 Alexander's disease;not provided de novo;germline 17 44908075 AGGAACATCGTGGTGAAGACCGTGGAGATGCGGGATGGAGAGGTAAGGAGGGATTTGGGCC 28935473 26798 NM_001110556.1(FLNA):c.3596C>T (p.Ser1199Leu) FLNA Dec 23, 2016 MedGen:C0025237,OMIM:309350,Orphanet:ORPHA2484,SNOMED CT:13449007;MedGen:C1844696,OMIM:304120,Orphanet:ORPHA90652,SNOMED CT:42432003 Melnick-Needles syndrome;Oto-palato-digital syndrome, type II germline X 154360199 GCAGCGCGGAGCTGACCATTGAGATCTGCTCGGAGGCGGGGCTTCCGGCCGAGGTGTACAT 1064793765 410363 NM_030632.2(ASXL3):c.3364C>T (p.Gln1122Ter) ASXL3 Jul 10, 2015 MedGen:CN517202 not provided germline 18 33743212 GCAAAGCATCAAGCTCGAGCCCATCTCTTCCAGACCTCTAAAGAGACCCGGTTGCCTCCTC 886040685 261393 NM_000059.3(BRCA2):c.7033C>T (p.Gln2345Ter) BRCA2 Sep 25, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 2;Hereditary cancer-predisposing syndrome germline 13 32354886 TGCAGCACAACTAAGGAACGTCAAGAGATACAGAATCCAAATTTTACCGCACCTGGTCAAG 111687884 51571 NM_000138.4(FBN1):c.643C>T (p.Arg215Ter) FBN1 Feb 24, 2017 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:CN118826,Orphanet:ORPHA91387;MedGen:CN169374 Marfan syndrome;Thoracic aortic aneurysm and aortic dissection;not specified germline 15 48537704 ACAAAAACGCTCTGCTGTGCCACAGTCGGCCGAGCCTGGGGCCACCCCTGTGAGATGTGTC 202166344 210710 NM_000143.3(FH):c.7C>T (p.Arg3Ter) FH Apr 17, 2013 MedGen:CN517202 not provided germline 1 241519716 TTCTACCCAAGCTCCCTCAGCACCATGTACCGAGCACTTCGGCTCCTCGCGCGCTCGCGTC 35983258 30072 NM_000559.2(HBG1):c.-53-196C>T HBG1 Jan 01, 1992 MedGen:C1841621,OMIM:141749 Fetal hemoglobin quantitative trait locus 1 germline 11 5250053 AATTAGCAGTATCCTCTTGGGGGCCCCTTCCCCACACTATCTCAATGCAAATATCTGTCTG 398123530 99358 NM_001005741.2(GBA):c.508C>T (p.Arg170Cys) GBA Oct 16, 2013 MedGen:C1961835,OMIM:230800,SNOMED CT:62201009 Gaucher's disease, type 1 germline 1 155238597 GTACCCATGGCCAGCTGTGACTTCTCCATCCGCACCTACACCTATGCAGACACCCCTGATG 140353201 101743 NM_017890.4(VPS13B):c.3598C>T (p.Arg1200Ter) VPS13B Sep 17, 2015 MedGen:C0265223,OMIM:216550,Orphanet:ORPHA193,SNOMED CT:56604005;MedGen:CN517202 Cohen syndrome;not provided germline 8 99467566 CAAAAACTGCTTGCTACGGGACCTGATACACGACATTCATTTGTTGTCTGTCTCCATGTTG 781540455 199072 NM_001256850.1(TTN):c.65239C>T (p.Arg21747Ter) TTN May 22, 2017 MedGen:C1858763,OMIM:604145;MedGen:CN517202 Dilated cardiomyopathy 1G;not provided germline 2 178575970 TGGACCAAAGATAACATCAACCTGAAAAACCGAGCCAACATTGAAAATACGGAATCATTTA 765070743 275494 NM_000027.3(AGA):c.319C>T (p.Arg107Ter) AGA Sep 20, 2016 Human Phenotype Ontology:HP:0012068,MedGen:C0268225,OMIM:208400 Aspartylglucosaminuria germline 4 177439651 ATGGATGTAGGAGCAGTAGGAGATCTCAGACGAATTAAAAATGCTATTGGTGTGGCACGGA 387907027 39803 NM_001029871.3(RSPO4):c.190C>T (p.Arg64Cys) RSPO4 Apr 01, 2008 MedGen:C0265998,OMIM:206800,Orphanet:ORPHA79143,SNOMED CT:23610003 Anonychia germline 20 968028 CTCTTCCTGTTCATCCGCCGGGAAGGCATCCGCCAGTACGGCAAGTGCCTGCACGACTGTC 398123883 100404 NM_004006.2(DMD):c.2332C>T (p.Gln778Ter) DMD Mar 02, 2017 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009;MedGen:C3668940,OMIM:302045;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Becker muscular dystrophy;Dilated cardiomyopathy 3B;Duchenne muscular dystrophy germline X 32501803 CGAGAAAAAGCTGAGAAGTTCAGAAAACTGCAAGATGCCAGCAGATCAGCTCAGGCCCTGG 886041971 265174 NM_001008537.2(NEXMIF):c.1042C>T (p.Arg348Ter) NEXMIF Sep 13, 2016 MedGen:CN517202 not provided germline X 74743515 TTTCCCAGCGTCTTTACTACCTGCCCCAAGCGAGAGTCTAAGAGTGGGGCCCTGAAGCAGA 794727957 196177 NM_000411.7(HLCS):c.1624C>T (p.Gln542Ter) HLCS Apr 09, 2015 MedGen:C0268581,OMIM:253270,Orphanet:ORPHA79242 Holocarboxylase synthetase deficiency germline 21 36765068 TCCCAGCTGGGACAGAGGATCCCGTTTGTCCAGCATCTGATGTCCGTGGCTGTCGTGGAAG 794729384 198911 NM_001256850.1(TTN):c.81193C>T (p.Arg27065Ter) TTN Sep 09, 2014 MedGen:CN517202 not provided germline 2 178560016 ACTGACTGGAAAACTTCCATTCAGAGCTTACGAGGGACAGAATATACAATAAGCGGACTAA 866429868 360620 NM_000444.5(PHEX):c.871C>T (p.Arg291Ter) PHEX Apr 17, 2015 MedGen:C0733682,OMIM:307800,Orphanet:ORPHA89936,SNOMED CT:82236004;MedGen:CN517202 Familial X-linked hypophosphatemic vitamin D refractory rickets;not provided germline;maternal X 22096976 TTTCAACAGATAATGATTCCACATGAAAACCGAACCAGCGAGGCCATGTACAACAAAATGA 606231310 170214 NM_003051.3(SLC16A1):c.982C>T (p.Arg328Ter) SLC16A1 Nov 13, 2014 MedGen:C4016683 Monocarboxylate transporter 1 deficiency, autosomal recessive germline 1 112917424 CTTGTAGCCAACACAAAGCCAATAAGACCTCGAATTCAGTATTTCTTTGCGGCTTCCGTTG 886041298 264805 NM_000194.2(HPRT1):c.145C>T (p.Leu49Phe) HPRT1 Sep 24, 2015 MedGen:CN517202 not provided germline X 134475191 TCCTGATTTTATTTCTGTAGGACTGAACGTCTTGCTCGAGATGTGATGAAGGAGATGGGAG 797045113 205129 NM_206933.2(USH2A):c.4405C>T (p.Gln1469Ter) USH2A Nov 21, 2014 MedGen:C1848634,OMIM:276901 Usher syndrome, type 2A germline 1 216175474 ACAGGTGTTTTCTAATATTTAGCACCAGCACAACTGAGGCCACCTCTGGTTAAAGGAATCA 80357372 69781 NM_007294.3(BRCA1):c.415C>T (p.Gln139Ter) BRCA1 Jul 27, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome germline 17 43104148 GGCTACAGAAACCGTGCCAAAAGACTTCTACAGAGTGAACCCGAAAATCCTTCCTTGGTAA 45619342 417647 NM_005267.4(GJA8):c.827C>T (p.Ser276Phe) GJA8 Feb 01, 2008 MedGen:C1861828,OMIM:116200 Cataract 1 germline 1 147908782 ATCAGCTCCTAGAAGAAGAGAAAATCGTTTCCCACTATTTCCCCTTGACCGAGGTTGGGAT 121909743 31132 NM_000340.1(SLC2A2):c.901C>T (p.Arg301Ter) SLC2A2 Jan 01, 2002 MedGen:C3495427,OMIM:227810,Orphanet:ORPHA2088,SNOMED CT:61598006 Fanconi-Bickel syndrome germline 3 171005347 ATAATTCAGCTCTTCACCAATTCCAGCTACCGACAGCCTATTCTAGTGGCACTGATGCTGC -1 425581 NM_001080517.2(SETD5):c.3526C>T (p.Arg1176Ter) SETD5 May 05, 2017 MedGen:CN517202 not provided germline 3 9474477 AGGATGGTTCCCACATCAGTAGAACGACTCCGAGAAGGAGGGAGCATCCCCAAGGTCCTCC 587777528 143261 NM_032790.3(ORAI1):c.734C>T (p.Pro245Leu) ORAI1 Mar 18, 2014 MedGen:C4014557,OMIM:615883 Myopathy, tubular aggregate, 2 germline 12 121641471 CTGCCATCGCCTCGACCACCATCATGGTGCCCTTCGGCCTGATCTTTATCGTCTTCGCCGT 398123865 100375 NM_004006.2(DMD):c.1615C>T (p.Arg539Ter) DMD Sep 11, 2013 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009;MedGen:C3668940,OMIM:302045;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Becker muscular dystrophy;Dilated cardiomyopathy 3B;Duchenne muscular dystrophy germline X 32573834 TGATTGTCTCTTCTCCAGGTATTGGGAGATCGATGGGCAAACATCTGTAGATGGACAGAAG -1 470905 NM_000044.4(AR):c.292C>T (p.Gln98Ter) AR Jul 20, 2016 MedGen:C0039585,OMIM:300068,SNOMED CT:12313004;MedGen:C1839259,OMIM:313200,Orphanet:ORPHA481 Androgen resistance syndrome;Bulbo-spinal atrophy X-linked germline X 67545438 CAGCAGCAGCAGGGTGAGGATGGTTCTCCCCAAGCCCATCGTAGAGGCCCCACAGGCTACC 74315357 17446 NM_032409.2(PINK1):c.736C>T (p.Arg246Ter) PINK1 Sep 01, 2004 MedGen:C1853833,OMIM:605909 Parkinson disease 6, autosomal recessive early-onset germline 1 20639952 ACAATGAGCCAGGAGCTGGTCCCAGCGAGCCGAGTGGCCTTGGCTGGGGAGTATGGAGCAG 72551318 76810 NM_000784.3(CYP27A1):c.808C>T (p.Arg270Ter) CYP27A1 Aug 01, 2013 MedGen:C0238052,OMIM:213700,Orphanet:ORPHA909,SNOMED CT:63246000;MedGen:C0238052,OMIM:213700,Orphanet:ORPHA909,SNOMED CT:63246000 Cholestanol storage disease;Cholestanol storage disease germline 2 218812713 TGGACTCGCCCCGTGCTGCCTTTCTGGAAGCGATACCTGGATGGTTGGAATGCCATCTTTT 774312182 237617 NM_153700.2(STRC):c.4057C>T (p.Gln1353Ter) STRC Feb 19, 2016 Gene:1694,MedGen:C1858916,OMIM:603964;MedGen:CN517202 Deafness, autosomal dominant 16;not provided germline 15 43604720 CAGATCCTGCTGTCCCATCTCAGTCAGCTGCAAGGCTTCTGCCTAGGAGAGACATTTGCCA 180177370 78984 NM_017890.4(VPS13B):c.8318C>T (p.Ser2773Leu) VPS13B - MedGen:CN517202 not provided germline 8 99817685 ACTGCCTCACAGCCAAACAGAAATTGCCTTCGTACATACTAGAAAACAATGAACTGACGGA 121908373 20175 NM_020533.2(MCOLN1):c.304C>T (p.Arg102Ter) MCOLN1 Sep 18, 2017 MedGen:C0238286,OMIM:252650,Orphanet:ORPHA578,SNOMED CT:111384001;MedGen:CN517202 Mucolipidosis type IV;not provided germline 19 7526505 ACATTCCGGGAAGAGAACACCATCGCCTTCCGACACCTCTTCCTGCTGGGCTACTCGGACG 80356779 76552 NM_001876.3(CPT1A):c.1436C>T (p.Pro479Leu) CPT1A Sep 05, 2017 MedGen:C1829703,Orphanet:ORPHA156;MedGen:C0342789,OMIM:255120,SNOMED CT:238001003;MedGen:CN517202 Carnitine palmitoyl transferase 1 deficiency;Carnitine palmitoyltransferase I deficiency;not provided germline 11 68780662 TCAACGCTGAACACTCCTGGGCAGATGCGCCGATCGTGGCCCACCTTTGGGAGGTGAGTTT 28942084 18741 NM_000527.4(LDLR):c.2054C>T (p.Pro685Leu) LDLR Jun 19, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000;MedGen:CN517202 Familial hypercholesterolemia;not provided germline;inherited;not applicable 19 11120436 GCGGCTGCCAGTATCTGTGCCTCCCTGCCCCGCAGATCAACCCCCACTCGCCCAAGTTTAC 121434421 21794 NM_004572.3(PKP2):c.2203C>T (p.Arg735Ter) PKP2 Aug 25, 2016 MedGen:C0349788,Orphanet:ORPHA247,SNOMED CT:253528005,SNOMED CT:281170005;MedGen:C1836906,OMIM:609040 Arrhythmogenic right ventricular cardiomyopathy;Arrhythmogenic right ventricular cardiomyopathy, type 9 germline 12 32802499 GTCCAGAAGGAAAGTGGCCTGCAGCACACCCGAAAGATGCTGCATGTTGGTGACCCAAGTG 398122365 94433 NM_152269.4(C12orf65):c.415C>T (p.Gln139Ter) C12orf65 Nov 22, 2013 MedGen:C3539506,OMIM:615035,Orphanet:ORPHA320375 Spastic paraplegia 55, autosomal recessive germline 12 123256945 AAAGAAAAACGAGAAGCGGCGAAGAAAAAACAAGAAAGGAAAAAAAGAGCAAAGGAAACCC 369251527 460080 NM_020549.4(CHAT):c.1642C>T (p.Arg548Ter) CHAT Jun 05, 2017 MedGen:C0393929,OMIM:254210,SNOMED CT:230670003 Familial infantile myasthenia germline 10 49655102 CATTCATCCTTCATCCCACGCAGGCTCCATCGAAGACTGGTGCCCACCTACGAGAGCGCGT 879254210 390794 NM_014874.3(MFN2):c.703C>T (p.Gln235Ter) MFN2 Dec 05, 2016 MedGen:CN043576 Charcot-Marie-Tooth disease, type 2 germline 1 11998873 CTGGTGGCCAACTCAGAGTCCACCCTGATGCAGACGGTAACTCCTCCTCTGCCTTCTCCCA 374913800 481553 NM_144499.2(GNAT1):c.904C>T (p.Gln302Ter) GNAT1 Feb 07, 2018 MedGen:C4225345,OMIM:616389 Night blindness, congenital stationary, type 1g germline 3 50194806 TACGAGGACGCCGGCAACTACATCAAGGTGCAGTTCCTCGAGCTCAACATGCGGCGCGACG 757976755 188107 NM_014362.3(HIBCH):c.196C>T (p.Arg66Trp) HIBCH Aug 01, 2015 MedGen:C0342738,OMIM:250620,Orphanet:ORPHA88639,SNOMED CT:237958002 Beta-hydroxyisobutyryl-CoA deacylase deficiency germline;inherited 2 190296836 TTCCTCAATGCACTGACTCTTAATATGATTCGGCAGATTTATCCACAGCTAAAGGTTTGTA -1 427106 NM_006297.2(XRCC1):c.1393C>T (p.Gln465Ter) XRCC1 Aug 22, 2017 MedGen:CN417133,OMIM:617633 SPINOCEREBELLAR ATAXIA, AUTOSOMAL RECESSIVE 26 germline 19 43546628 GAAGAGACCAAAGCAGCCTCACCAGTGCTCCAGGAAGATATAGACATTGAGGGGGTACAGT 121918292 17753 NM_017671.4(FERMT1):c.787C>T (p.Gln263Ter) FERMT1 Apr 15, 2003 MedGen:C0406557,OMIM:173650,SNOMED CT:238835001,SNOMED CT:238836000 Kindler's syndrome germline 20 6107594 TCCTCACGCTCCCTTATGGAACAAGGCATCCAAGAGGATGAGCAGCTGCTCTTACGATTTA 397515490 77882 NM_015284.3(SZT2):c.2092C>T (p.Gln698Ter) SZT2 Sep 05, 2013 MedGen:C3809624,OMIM:615476 Early infantile epileptic encephalopathy 18 germline 1 43423153 ATCCTGCGGCTGCGTTTCCCCCACCGGGTACAAAGCAAGGAGCCAACGCCCAAGGTGAAAC 137852498 25112 NM_000194.2(HPRT1):c.503C>T (p.Thr168Ile) HPRT1 Jan 01, 1990 MedGen:C0268117,OMIM:300323,Orphanet:ORPHA79233,SNOMED CT:238007004 Partial hypoxanthine-guanine phosphoribosyltransferase deficiency germline X 134498407 TTGTAATTAACAGCTTGCTGGTGAAAAGGACCCCACGAAGTGTTGGATATAAGCCAGACTG -1 481995 NM_000256.3(MYBPC3):c.1303C>T (p.Gln435Ter) MYBPC3 Jul 07, 2017 MedGen:CN517202 not provided germline 11 47343069 CAGTGCTCATTGGCGGACGACGCAGCCTACCAGTGCGTGGTGGGTGGCGAGAAGTGTAGCA 74315439 31996 NM_000394.3(CRYAA):c.346C>T (p.Arg116Cys) CRYAA Feb 01, 2007 MedGen:C1858679,OMIM:604219 Cataract, autosomal dominant germline 21 43172104 GACCACGGCTACATTTCCCGTGAGTTCCACCGCCGCTACCGCCTGCCGTCCAACGTGGACC 181690344 169625 NM_006031.5(PCNT):c.1468C>T (p.Gln490Ter) PCNT Feb 08, 2013 MedGen:C0432246,OMIM:210720,Orphanet:ORPHA2637 Microcephalic osteodysplastic primordial dwarfism type 2 germline 21 46353115 TGACTCCGTTATGTTGCAGAGCTACATGAGCAACTCCTGGCGCGCACCTCTCGTGTGGAAG 575767207 214325 NM_025114.3(CEP290):c.5344C>T (p.Arg1782Ter) CEP290 Feb 23, 2015 MedGen:C1857780,OMIM:610188 Joubert syndrome 5 unknown 12 88079112 GCCCATCTCAATGTTCAACAAATCGTTGATCGACATACTAGAGAGCTAAAGGTGAACATCA 1057518717 361173 NM_015311.2(OBSL1):c.3955C>T (p.Gln1319Ter) OBSL1 May 01, 2016 MedGen:C2752041,OMIM:612921 Three M syndrome 2 germline;paternal 2 219557454 CTGGCAAGCCAGGGGCGGGTGCAGCTGGAGCAGGCCGGGGCCAGGCAGGTGCTGCGGGTGC 780960812 259361 NM_001242896.1(DEPDC5):c.1909C>T (p.Arg637Ter) DEPDC5 Jun 28, 2017 Gene:50987,MedGen:C1858477,OMIM:604364;MedGen:CN517202 Epilepsy, familial focal, with variable foci 1;not provided germline 22 31821540 GGAGAAGCCATCCAGATCCACCACCAGACCCGACAGAATATGGCGGAGCTACAAGGCAGCG 368619022 143186 NM_016122.2(CEP83):c.241C>T (p.Gln81Ter) CEP83 Jun 05, 2014 MedGen:C3890591,OMIM:615862 Nephronophthisis 18 germline 12 94411780 AAGCACCTGTTTAATGAAAAGCAAACTCAGCAGGAAAAACTTCAGCTCCTGCTTGAAGAAC -1 444704 NM_000051.3(ATM):c.652C>T (p.Gln218Ter) ATM Aug 31, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline 11 108244108 AAATTTTTGGACTTTTTTTCCAAGGCTATTCAGTGTGCGAGGTAATCTAATCTCTTTTTCT 398124156 100980 NM_004463.2(FGD1):c.1468C>T (p.Gln490Ter) FGD1 Jan 21, 2013 MedGen:C0175701,OMIM:305400,SNOMED CT:14921002 Aarskog syndrome germline X 54465725 CTGGTCAACACCTGGACAGAGCGCTCCACCCAGTTTAAAGTCATCATCCATGAGGTGCAGG 767748011 361893 NM_022916.5(VPS33A):c.1492C>T (p.Arg498Trp) VPS33A Jan 20, 2017 MedGen:C4310627,OMIM:617303 Mucopolysaccharidosis-plus syndrome germline 12 122232917 GTGTACAGTGGGTATGCCCCGCTCAGTGTGCGGCTGGCCCAGCTGCTTTCCCGGCCTGGCT 121908621 21060 NM_005476.5(GNE):c.796C>T (p.Arg266Trp) GNE Oct 18, 2012 MedGen:C0342853,OMIM:269921,Orphanet:ORPHA3166,SNOMED CT:238051008 Sialuria germline 9 36234106 ATAGGGAGCAAAGAGATGGTTCGAGTGATGCGGAAGAAGGGCATTGAGCATCATCCCAACT 121908518 440716 NM_014946.3(SPAST):c.1684C>T (p.Arg562Ter) SPAST Dec 07, 2015 MedGen:CN517202 not provided germline 2 32145004 TTGGCAAAAGATGCAGCACTGGGTCCTATCCGAGGTAGGTATACAAGAGCTTAAAACATTT 745874032 359547 NM_000094.3(COL7A1):c.7012C>T (p.Arg2338Ter) COL7A1 Jul 31, 2015 MedGen:CN517202 not provided germline 3 48572138 GCCAAAGGTGACCGAGGACTGCCAGGGCCGCGAGGCGAGAAGGTGAGGTGGGTTGGCCCTG -1 434321 NM_000527.4(LDLR):c.1943C>T (p.Ser648Phe) LDLR - MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11120189 ATGTCAACTTGTTGGCTGAAAACCTACTGTCCCCAGAGGATATGGTTCTCTTCCACAACCT -1 427889 NM_014795.3(ZEB2):c.1489C>T (p.Gln497Ter) ZEB2 Jan 12, 2016 MedGen:C1856113,OMIM:235730,Orphanet:ORPHA2152 Mowat-Wilson syndrome germline 2 144399698 AAAGGTTATCACATGAAGGATCCATGCTCTCAACCTGAGGAACAAGGAGTTACTTCTCCTA 1057517992 359952 NM_003482.3(KMT2D):c.12844C>T (p.Arg4282Ter) KMT2D Oct 20, 2016 MedGen:CN517202 not provided germline 12 49031861 GGCCCCCTCCAGGAGCTAGGGGCAGGGCCTCGACCTCAGGGCCCACCCCGGCTCCCTGCCC 121434577 31617 NM_000123.3(ERCC5):c.406C>T (p.Gln136Ter) ERCC5 Jun 01, 2002 MedGen:C0268141,OMIM:278780,SNOMED CT:36454001 Xeroderma pigmentosum, group G germline 13 102854313 TCCAGAGATGAAGCACTACCCAGTCTTACCCAAGTTCGAAGAGAAAACGACCTCTATGTTT 119456965 17664 NM_001037633.1(SIL1):c.331C>T (p.Arg111Ter) SIL1 Mar 01, 2007 MedGen:C0024814,OMIM:248800,Orphanet:ORPHA559,SNOMED CT:80734006 Marinesco-Sjögren syndrome germline 5 139050960 GAGGCAAAACTCCAATATGAGGACAAGTTCCGAAATAATTTGAAAGGCAAAAGGTACAGTG 80338905 34233 NM_003383.4(VLDLR):c.1342C>T (p.Arg448Ter) VLDLR Aug 26, 2008 MedGen:CN074243,OMIM:224050 Cerebellar ataxia, mental retardation, and dysequilibrium syndrome 1 germline 9 2645603 GGCAAAGAGCCAAGTCTGATCTTCACTAATCGAAGAGACATCAGGAAGATTGGCTTAGAGA 1057518297 359638 NM_003060.3(SLC22A5):c.1252C>T (p.Gln418Ter) SLC22A5 May 24, 2017 MedGen:C0342788,OMIM:212140,Orphanet:ORPHA158,SNOMED CT:21764004;MedGen:CN517202 Renal carnitine transport defect;not provided germline 5 132390889 TTCCTGGGTGGCAGTGTCCTTCTCTTCATGCAGCTGGTACCCCCAGGTAGGGACCATGTGC 119461974 17971 NM_002076.3(GNS):c.1063C>T (p.Arg355Ter) GNS Jan 01, 2003 MedGen:C0086650,OMIM:252940,Orphanet:ORPHA79272,SNOMED CT:15892005 Mucopolysaccharidosis, MPS-III-D germline 12 64737039 GAGTTTGATATCAAAGTTCCACTGTTGGTTCGAGGACCTGGGATCAAACCAAATCAGACAA 121434389 20790 NM_000975.4(RPL11):c.223C>T (p.Arg75Ter) RPL11 Dec 01, 2008 MedGen:C2675512,OMIM:612562 Diamond-Blackfan anemia 7 germline 1 23693872 AATGAAAAGATTGCTGTCCACTGCACAGTTCGAGGGGCCAAGGCAGAAGAAATCTTGGAGA 886039418 259995 NM_130799.2(MEN1):c.1192C>T (p.Gln398Ter) MEN1 Mar 30, 2016 MedGen:CN517202 not provided germline 11 64805192 TGCCCTCCCTTCCCCCTCGTCCAGGGCACCCAGAGCCAAGGTTCCGCCCTCCAGGACCCTG 61622935 31211 NM_002055.4(GFAP):c.262C>T (p.Arg88Cys) GFAP Oct 03, 2016 MedGen:C0270726,OMIM:203450,Orphanet:ORPHA58,SNOMED CT:81854007;MedGen:CN517202 Alexander's disease;not provided germline 17 44915225 GACCGCTTTGCCAGCTACATCGAGAAGGTTCGCTTCCTGGAACAGCAAAACAAGGCGCTGG -1 439841 NM_014806.4(RUSC2):c.3952C>T (p.Arg1318Ter) RUSC2 Nov 27, 2017 MedGen:CN651335,OMIM:617773 MENTAL RETARDATION, AUTOSOMAL RECESSIVE 61 germline 9 35560592 GGTGGGGGACCTCCCCAGGCTCCACCACCCCGAGAGGGAGTAGTGGAGGGGGCTGAGGCCT -1 442363 NM_001184880.1(PCDH19):c.169C>T (p.Gln57Ter) PCDH19 Sep 22, 2016 MedGen:CN517202 not provided germline X 100408429 CGAGAGGCGGGCTTCGCGCTGGACCCCCGGCAGGCTTCAGCCTTTCGCGTGGTGTCCAACT 886043603 271482 NM_000214.2(JAG1):c.841C>T (p.Gln281Ter) JAG1 Feb 28, 2017 MedGen:C1956125,OMIM:118450 Alagille syndrome 1 germline 20 10652513 TGCGTCCACGGCATCTGTAATGAGCCCTGGCAGTGCCTCTGTGAGACCAACTGGGGCGGCC 200370925 15152 NM_022067.3(VIPAS39):c.658C>T (p.Arg220Ter) VIPAS39 Apr 01, 2010 MedGen:C3150672,OMIM:613404 Arthrogryposis, renal dysfunction, and cholestasis 2 germline 14 77442636 ACAGAGATCCTCTTCCGAGAGCTGGAGGTGCGACAGGTTGCCCTGAGACATCTTATTCACT 34451549 30497 NM_000518.4(HBB):c.316-197C>T HBB Jun 16, 2017 MedGen:C0599528;MedGen:C0005283,OMIM:613985,Orphanet:ORPHA848,SNOMED CT:65959000;MedGen:C0271980,SNOMED CT:86715000;MedGen:CN169374 Beta thalassemia major;beta Thalassemia;beta^0^ Thalassemia;not specified germline;unknown 11 5225923 AGAATAACAGTGATAATTTCTGGGTTAAGGCAATAGCAATATCTCTGCATATAAATATTTC 137853089 22837 NM_004482.3(GALNT3):c.1441C>T (p.Gln481Ter) GALNT3 Jan 01, 2007 MedGen:C1876187,OMIM:211900,OMIM:610233,Orphanet:ORPHA306661 Tumoral calcinosis, familial, hyperphosphatemic germline 2 165755015 TCAAAAAGATTTGAAATAAAACACCGCCTTCAGTGTAAAAATTTTACATGGTATCTGAACA 113994022 19478 NM_020365.4(EIF2B3):c.260C>T (p.Ala87Val) EIF2B3 Feb 01, 2002 MedGen:C1858991,OMIM:603896,Orphanet:ORPHA99854 Leukoencephalopathy with vanishing white matter germline 1 44978349 GTATTCCTGATGACGCTGACATGGGAACTGCAGATTCTTTGCGCTACATATATCCAAAACT 397508168 67872 NM_000492.3(CFTR):c.115C>T (p.Gln39Ter) CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline;unknown 7 117504314 AGACAGCGCCTGGAATTGTCAGACATATACCAAATCCCTTCTGTTGATTCTGCTGACAATC 912448894 434222 NM_000527.4(LDLR):c.431C>T (p.Pro144Leu) LDLR - MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11105337 GCTTGGACGGCTCAGACGAGGCCTCCTGCCCGGTGCTCACCTGTGGTCCCGCCAGCTTCCA 118203958 16172 NM_001142617.1(STRA6):c.878C>T (p.Pro293Leu) STRA6 Mar 01, 2007 MedGen:C1832661,OMIM:601186,Orphanet:ORPHA2470 Microphthalmia syndromic 9 germline 15 74190889 TTCCTTTGAGGACTACAGGATTCCATCTCCCGCTGAAGCTGGTGCTTTCAGCTACACTGAC 730882034 180115 NM_000551.3(VHL):c.257C>T (p.Pro86Leu) VHL Sep 27, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0019562,OMIM:193300,Orphanet:ORPHA892,SNOMED CT:46659004 Hereditary cancer-predisposing syndrome;Von Hippel-Lindau syndrome germline 3 10142104 TCTGCAATCGCAGTCCGCGCGTCGTGCTGCCCGTATGGCTCAACTTCGACGGCGAGCCGCA 121918238 16471 NM_001177317.1(SLC34A3):c.1402C>T (p.Arg468Trp) SLC34A3 Nov 19, 2013 MedGen:C0342645,OMIM:241530,SNOMED CT:237891005 Autosomal recessive hypophosphatemic bone disease germline;paternal 9 137236018 ATCCTGCTGTGGTACCTGGTGCCTGCACTGCGGCTGCCCATCCCGCTGGCCAGGCACTTCG 386134243 45135 NM_005572.3(LMNA):c.1003C>T (p.Arg335Trp) LMNA Jun 15, 2017 MedGen:C0410190,OMIM:181350,Orphanet:ORPHA98853,SNOMED CT:240072005;MedGen:C1854154,OMIM:605588,Orphanet:ORPHA98856;MedGen:CN043576;MedGen:C2750785,OMIM:613205,Orphanet:ORPHA157973;MedGen:C1449563,OMIM:115200,Orphanet:ORPHA300751;MedGen:C0796031,OMIM:212112,Orphanet:ORPHA2229;MedGen:C2750035,OMIM:616516,Orphanet:ORPHA98855;MedGen:C1720860,OMIM:151660,Orphanet:ORPHA2348;MedGen:C1857829,OMIM:610140,Orphanet:ORPHA168796;MedGen:C0033300,OMIM:176670,Orphanet:ORPHA740,SNOMED CT:238870004;MedGen:C0406585,OMIM:275210,Orphanet:ORPHA1662,SNOMED CT:400128006;MedGen:C1834653,OMIM:159001,Orphanet:ORPHA264;MedGen:C0432291,OMIM:248370,Orphanet:ORPHA2457,SNOMED CT:109419009;EFO:EFO_0000407,Human Phenotype Ontology:HP:0001644,MedGen:C0007193,Orphanet:ORPHA217604,SNOMED CT:195021004;MedGen:CN517202 Benign scapuloperoneal muscular dystrophy with cardiomyopathy;Charcot-Marie-Tooth disease type 2B1;Charcot-Marie-Tooth disease, type 2;Congenital muscular dystrophy, LMNA-related;Dilated cardiomyopathy 1A;Dilated cardiomyopathy-hypergonadotropic hypogonadism syndrome;Emery-Dreifuss muscular dystrophy 3, autosomal recessive;Familial partial lipodystrophy 2;Heart-hand syndrome, Slovenian type;Hutchinson-Gilford syndrome;Lethal tight skin contracture syndrome;Limb-girdle muscular dystrophy, type 1B;Mandibuloacral dysostosis;Primary dilated cardiomyopathy;not provided germline;unknown 1 156135967 GACTCACTGGCCCGTGAGCGGGACACCAGCCGGCGGCTGCTGGCGGAAAAGGAGCGGGAGA 281875328 38543 NM_001614.3(ACTG1):c.760C>T (p.Arg254Trp) ACTG1 Sep 17, 2015 MedGen:C3281235,OMIM:614583;MedGen:CN517202 Baraitser-Winter Syndrome 2;not provided germline 17 81511230 GATGGCCAGGTCATCACCATTGGCAATGAGCGGTTCCGGTGTCCGGAGGCGCTGTTCCAGC 63751421 95595 NM_000249.3(MLH1):c.256C>T (p.Gln86Ter) MLH1 Sep 05, 2013 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Lynch syndrome germline 3 37001003 GTATGTGAAAGGTTCACTACTAGTAAACTGCAGTCCTTTGAGGATTTAGCCAGTATTTCTA 63750508 96279 NM_000251.2(MSH2):c.1861C>T (p.Arg621Ter) MSH2 Aug 24, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0009405,Orphanet:ORPHA443090;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Hereditary nonpolyposis colon cancer;Lynch syndrome;not provided germline 2 47475126 GTGTCAAATGGAGCACCTGTTCCATATGTACGACCAGCCATTTTGGAGAAAGGACAAGGAA 387907190 40337 NM_017755.5(NSUN2):c.679C>T (p.Gln227Ter) NSUN2 May 04, 2012 MedGen:C1970199,OMIM:611091 Mental retardation, autosomal recessive 5 germline 5 6620242 GACAACAAGCGCTGCTACCTGCTCGTCCATCAAGCCAAGAGGCTGAGCAGCCCCTGCATCA 121434528 33317 NM_001613.2(ACTA2):c.772C>T (p.Arg258Cys) ACTA2 Aug 01, 2017 MedGen:C2673186,OMIM:611788;MedGen:C3279690,OMIM:614042;MedGen:CN118826,Orphanet:ORPHA91387;MedGen:CN517202 Aortic aneurysm, familial thoracic 6;Moyamoya disease 5;Thoracic aortic aneurysm and aortic dissection;not provided germline 10 88939543 CAAGTGATCACCATCGGAAATGAACGTTTCCGCTGCCCAGAGACCCTGTTCCAGCCATCCT 886042651 267771 NM_001844.4(COL2A1):c.3574C>T (p.Arg1192Ter) COL2A1 Sep 29, 2015 MedGen:C2020284,OMIM:108300 Stickler syndrome type 1 germline 12 47975986 GGCCCCATTGGGCCTCCTGGTCCCCGTGGACGATCAGGCGAAACCGGCCCTGCTGTAAGTG 121918343 20415 NM_005989.3(AKR1D1):c.316C>T (p.Leu106Phe) AKR1D1 Oct 01, 2003 MedGen:C1856127,OMIM:235555,Orphanet:ORPHA79303 Bile acid synthesis defect, congenital, 2 germline 7 138091822 GAGATGGTCCGCCCAACCCTGGAGAGGACACTCAGGGTCCTCCAGCTAGATTATGTGGATC 80338752 24494 NM_004525.2(LRP2):c.10195C>T (p.Arg3399Ter) LRP2 Jun 28, 2011 MedGen:C1857277,OMIM:222448,Orphanet:ORPHA2143 Donnai Barrow syndrome germline 2 169178001 TGCAGGTACTCTGATTTGGAGGGCCACCATCGACACACGGTGTATGATGGGGCACTGCCTC -1 482232 NM_002294.2(LAMP2):c.718C>T (p.Gln240Ter) LAMP2 Sep 27, 2017 MedGen:CN517202 not provided germline X 120447864 GATACTTGTCTGCTGGCTACCATGGGGCTGCAGCTGAACATCACTCAGGATAAGGTATAGG 886041116 263863 NM_001282531.2(ADNP):c.2188C>T (p.Arg730Ter) ADNP Sep 30, 2016 Human Phenotype Ontology:HP:0000164,MedGen:C0262444;Human Phenotype Ontology:HP:0001274,MedGen:C1837248;Human Phenotype Ontology:HP:0000718,MedGen:C0001807,SNOMED CT:61372001;Human Phenotype Ontology:HP:0001263,MedGen:C4020875;Human Phenotype Ontology:HP:0000824,MedGen:C3714796;MedGen:C4014538,OMIM:615873,Orphanet:ORPHA404448;Human Phenotype Ontology:HP:0000821,MedGen:C0020676,Orphanet:ORPHA181396;Human Phenotype Ontology:HP:0001250,MedGen:C0036572;Human Phenotype Ontology:HP:0000733,MedGen:C0038273;MedGen:CN517202 Abnormality of the teeth;Agenesis of corpus callosum;Aggressive behavior;Global developmental delay;Growth hormone deficiency;Helsmoortel-van der aa syndrome;Hypothyroidism;Seizures;Stereotypy;not provided de novo;germline;unknown 20 50892526 GAGCAAATGGAATTTCCCTTACTGAAAAAACGAAAGTTAGATGATGATAGTGATTCACCCA 28939680 22517 NM_001540.4(HSPB1):c.404C>T (p.Ser135Phe) HSPB1 Nov 18, 2008 MedGen:C1847823,OMIM:606595,Orphanet:ORPHA99940;MedGen:C2608087,OMIM:608634 Charcot-Marie-Tooth disease type 2F;Distal hereditary motor neuronopathy type 2B germline 7 76303841 AGGAGCGGCAGGACGAGCATGGCTACATCTCCCGGTGCTTCACGCGGAAATACACGTGAGT 121909358 23672 NM_000163.4(GHR):c.181C>T (p.Arg61Ter) GHR May 25, 2014 MedGen:C0271568,OMIM:262500,Orphanet:ORPHA633,SNOMED CT:38196001 Laron-type isolated somatotropin defect germline;inherited 5 42688934 CCTAAATTCACCAAGTGCCGTTCACCTGAGCGAGAGACTTTTTCATGCCACTGGACAGATG 104893900 24043 NM_004387.3(NKX2-5):c.533C>T (p.Thr178Met) NKX2-5 Jul 15, 2005 MedGen:C1862388,OMIM:108900 Atrial septal defect 7 with or without atrioventricular conduction defects germline 5 173233011 GCGACCAGCTGGCCAGCGTGCTGAAACTCACGTCCACGCAGGTCAAGATCTGGTTCCAGAA -1 472251 NM_004312.2(ARR3):c.298C>T (p.Arg100Ter) ARR3 Dec 22, 2017 MedGen:CN708878,OMIM:301010 MYOPIA 26, X-LINKED, FEMALE-LIMITED germline X 70276234 CCTCAGGGGCCCCTCACAGTCCTACAGGAGCGACTACTGCACAAGCTAGGGGACAATGCCT 121918712 27561 NM_004612.3(TGFBR1):c.599C>T (p.Thr200Ile) TGFBR1 Mar 01, 2005 MedGen:C2697933,OMIM:609192 Loeys-Dietz syndrome 1 germline 9 99137883 CTTTAGGTTTACCATTGCTTGTTCAGAGAACAATTGCGAGAACTATTGTGTTACAAGAAAG 74315391 22425 NM_172107.3(KCNQ2):c.619C>T (p.Arg207Trp) KCNQ2 Aug 19, 2016 MedGen:C1852587,OMIM:121200;MedGen:C3149075;MedGen:CN517202 Benign familial neonatal seizures 1;Seizures, benign familial neonatal, 1, and/or myokymia;not provided germline 20 63444730 CTCCGGAGCCTGCGCTTCCTGCAGATTCTGCGGATGATCCGCATGGACCGGCGGGGAGGCA 745918507 455093 NM_001369.2(DNAH5):c.6763C>T (p.Arg2255Ter) DNAH5 Apr 04, 2017 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244 Ciliary dyskinesia germline 5 13820424 GTCATCCAGCTATTCGAAACGCAGAGAGTGCGACATGGGATGATGACTCTGGGGCCCAGTG 759081373 407062 NM_000238.3(KCNH2):c.1726C>T (p.Gln576Ter) KCNH2 Jun 23, 2015 MedGen:CN517202 not provided germline 7 150951667 TGCATCTGGTACGCCATCGGCAACATGGAGCAGCCACACATGGACTCACGCATCGGCTGGC 1085307401 414369 NM_001204.6(BMPR2):c.2752C>T (p.Q918*) BMPR2 - MedGen:C0152171,OMIM:178600,SNOMED CT:26174007 Primary pulmonary hypertension germline 2 202556417 AATCCATGTTCAGAACAAGATGTTCTTGCACAGGGTGTTCCAAGCACAGCAGCAGATCCTG 587783836 169996 NM_000252.2(MTM1):c.557C>T (p.Thr186Ile) MTM1 Feb 08, 2013 MedGen:C0410203,OMIM:310400,Orphanet:ORPHA596,SNOMED CT:46804001 Severe X-linked myotubular myopathy germline X 150641297 AGGGCTTGCCCAATCACCATTGGAGAATAACTTTTATTAATAAGTGCTATGAGCTCTGTGA 80338937 34552 NM_024577.3(SH3TC2):c.3601C>T (p.Gln1201Ter) SH3TC2 Mar 31, 2008 MedGen:C1866636,OMIM:601596,Orphanet:ORPHA99949 Charcot-Marie-Tooth disease, type 4C not provided 5 149006955 AAGACCCTGTCCCTCTGTCCACCATGGCTGCAGAGTCCCAAGGAGGCCCTGTACTATGCCA 779823379 214185 NM_001080522.2(CC2D2A):c.3850C>T (p.Arg1284Cys) CC2D2A Feb 23, 2015 MedGen:C2676788,OMIM:612285 Joubert syndrome 9 unknown 4 15580046 CAAGCTGAATGTGCCTTAAAGTTTCCAAATCGTCAGTGCCTTACAACAGTAATTGATATAA 879254367 245311 NM_000527.4(LDLR):c.-152C>T LDLR Mar 25, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11089397 GCAGTGAGGTGAAGACATTTGAAAATCACCCCACTGCAAACTCCTCCCCCTGCTAGAAACC 1057518233 359812 NM_016628.4(WAC):c.1072C>T (p.Gln358Ter) WAC Nov 23, 2016 MedGen:CN517202 not provided germline 10 28608338 GTTCCACAGTCGCCAATACCTCCCTTACTTCAGGACCCAAATCTTCTTAGACAATTGCTTC 193922770 136853 NM_000540.2(RYR1):c.1654C>T (p.Arg552Trp) RYR1 Mar 22, 2017 MedGen:CN239331;MedGen:CN517202 RYR1-Related Disorders;not provided germline;unknown 19 38455528 AACTTGGACTGGCTGGTCAGCAAGCTGGATCGGCTGGAGGCCTCGTCTGGTAGGAGAACCC 587782010 151501 NM_000059.3(BRCA2):c.8608C>T (p.Gln2870Ter) BRCA2 Sep 08, 2016 MedGen:C2675520,OMIM:612555;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 2;Hereditary cancer-predisposing syndrome germline 13 32371076 AAGAGACTAGAAGCCTTATTCACTAAAATTCAGGAGGAATTTGAAGAACATGAAGGTAAAA 121912778 32634 NM_000550.2(TYRP1):c.1120C>T (p.Arg374Ter) TYRP1 Aug 01, 2005 MedGen:C1859932,OMIM:203290 Oculocutaneous albinism type 3 germline 9 12704564 GACCCCACGGGAAAGTATGACCCTGCTGTTCGAAGTCTTCACAATTTGGCTCATCTATTCC 121912855 32502 NM_000094.3(COL7A1):c.6205C>T (p.Arg2069Cys) COL7A1 Jun 14, 2017 Human Phenotype Ontology:HP:0008066,MedGen:C0241054;Human Phenotype Ontology:HP:0000682,MedGen:C4021800;Human Phenotype Ontology:HP:0000164,MedGen:C0262444;Human Phenotype Ontology:HP:0002293,MedGen:C1860137;Human Phenotype Ontology:HP:0004325,MedGen:CN003826;Human Phenotype Ontology:HP:0002460,MedGen:C1864696;Human Phenotype Ontology:HP:0003457,MedGen:C0476403;MedGen:C2673612;Human Phenotype Ontology:HP:0001508,MedGen:C0231246;Human Phenotype Ontology:HP:0000953,MedGen:C0162834,Orphanet:ORPHA79375;Human Phenotype Ontology:HP:0000252,MedGen:C0424688;Human Phenotype Ontology:HP:0008404,MedGen:C0221260;Human Phenotype Ontology:HP:0100699,MedGen:C0008767;Human Phenotype Ontology:HP:0004552,MedGen:C3806301;Human Phenotype Ontology:HP:0004322,MedGen:C0349588;MedGen:CN517202 Abnormal blistering of the skin;Abnormality of dental enamel;Abnormality of the teeth;Alopecia of scalp;Decreased body weight;Distal muscle weakness;EMG abnormality;Epidermolysis bullosa dystrophica inversa, autosomal recessive;Failure to thrive;Hyperpigmentation of the skin;Microcephaly;Nail dystrophy;Scarring;Scarring alopecia of scalp;Short stature;not provided germline;unknown 3 48575218 TTTCAGGGAGAACGGGGAGAGAAAGGAGAACGTGGAGAACAGGTGGGCTGCGATGGGCTTC 281875325 38540 NM_001614.3(ACTG1):c.359C>T (p.Thr120Ile) ACTG1 Sep 17, 2015 MedGen:C3281235,OMIM:614583;MedGen:CN517202 Baraitser-Winter Syndrome 2;not provided germline 17 81511907 TGAACCCCAAGGCCAACAGAGAGAAGATGACTCAGGTGAGGCTCGGCCGACGCCCGTGCTC 118204011 16712 NM_000785.3(CYP27B1):c.1027C>T (p.Leu343Phe) CYP27B1 Mar 01, 2013 MedGen:C0268689,OMIM:264700,Orphanet:ORPHA289157,SNOMED CT:67049004 Vitamin D-dependent rickets, type 1 germline 12 57764487 CTCTCCCGGCACCCCGAAGTCCAGACAGCACTCCACTCAGAGATCACAGCTGCCCTGAGCC 72549395 272963 NM_003742.2(ABCB11):c.3457C>T (p.Arg1153Cys) ABCB11 Jun 09, 2016 MedGen:C2608083,OMIM:605479,Orphanet:ORPHA99961;MedGen:C1866138,OMIM:601847 Benign recurrent intrahepatic cholestasis 2;Progressive familial intrahepatic cholestasis 2 germline 2 168927317 GACAGCAAAAAAGTAAATGTCCAGTTCCTCCGCTCAAACATTGGAATTGTTTCCCAGGAAC 28940570 17776 NM_004183.3(BEST1):c.728C>T (p.Ala243Val) BEST1 Apr 01, 2000 MedGen:C0339510,OMIM:153700,Orphanet:ORPHA1243,SNOMED CT:90036004;MedGen:CN517202 Vitelliform macular dystrophy type 2;not provided germline 11 61958159 CCTCCTCCTCCTCCCAGGTGGTGACTGTGGCGGTGTACAGCTTCTTCCTGACTTGTCTAGT 886039500 259810 NM_001369.2(DNAH5):c.10441C>T (p.Arg3481Ter) DNAH5 Oct 29, 2015 MedGen:CN517202 not provided germline 5 13754317 CTTTGTTAGACCTTGCTTGAAGATGCAGAGCGATGCAGACACAAGATGCAGACAGCTTCCA 587783658 169275 NM_005682.6(ADGRG1):c.265C>T (p.His89Tyr) ADGRG1 Feb 08, 2013 MedGen:C1847352,OMIM:606854,Orphanet:ORPHA101070 Polymicrogyria, bilateral frontoparietal germline 16 57651400 CGATCCTTCCCTGACCCCAGGGGCCTCTACCACTTCTGCCTCTACTGGAACCGACATGCTG 796052626 203788 NM_172107.3(KCNQ2):c.628C>T (p.Arg210Cys) KCNQ2 Mar 31, 2016 MedGen:C3150986,OMIM:613720,Orphanet:ORPHA439218 Early infantile epileptic encephalopathy 7 germline 20 63444721 CTGCGCTTCCTGCAGATTCTGCGGATGATCCGCATGGACCGGCGGGGAGGCACCTGGAAGC 1085307766 415462 NM_001271.3(CHD2):c.982C>T (p.Gln328Ter) CHD2 Apr 06, 2017 MedGen:CN517202 not provided germline 15 92942998 CACAGCACATGGGAGAGTGAAGAATCCTTACAGCAACAGAAAGTGAAGGGCCTAAAAAAAC 773883764 483114 NM_178170.2(NEK8):c.1804C>T (p.Arg602Trp) NEK8 Feb 14, 2018 MedGen:C3809434,OMIM:615415 Renal-hepatic-pancreatic dysplasia 2 germline 17 28741149 CAGTTGGGCACCAATACTCGCCGAGGCAGTCGGGCACCCTGTAAGGTCCAAGGCCTTGAGG 121913077 31540 NM_000043.5(FAS):c.817C>T (p.Gln273Ter) FAS Jun 16, 1995 MedGen:C1866119 Autoimmune lymphoproliferative syndrome, type 1a germline 10 89014259 AAGAATGACAATGTCCAAGACACAGCAGAACAGAAAGTTCAACTGCTTCGTAATTGGCATC 132630278 26112 NM_001128834.2(PLP1):c.646C>T (p.Pro216Ser) PLP1 Sep 28, 2012 Human Phenotype Ontology:HP:0003269,MedGen:C0205711,OMIM:312080,Orphanet:ORPHA702,SNOMED CT:64855000;MedGen:CN517202 Pelizaeus-Merzbacher disease;not provided germline X 103788460 TACTTAGGTGTTCTCCCATGGAATGCTTTCCCTGGCAAGGTTTGTGGCTCCAACCTTCTGT 387907222 44197 NM_018475.4(TMEM165):c.376C>T (p.Arg126Cys) TMEM165 Jul 18, 2012 MedGen:C3553571,OMIM:614727,Orphanet:ORPHA314667 Congenital disorder of glycosylation type 2k germline 4 55411782 ATAGCAGCCATCATGGCAATGCGCTATAACCGCCTGACCGTGCTGGCTGGTGCAATGCTTG 121908371 20172 NM_020533.2(MCOLN1):c.964C>T (p.Arg322Ter) MCOLN1 Jun 03, 2016 MedGen:C0238286,OMIM:252650,Orphanet:ORPHA578,SNOMED CT:111384001;MedGen:CN517202 Mucolipidosis type IV;not provided germline;unknown 19 7528683 TCCTTCCTCCTCTGCGCCCGCTCACTCCTTCGAGGCTTCCTGCTGCAGAACGTGAGGCTTC 1057518891 360900 NM_017780.3(CHD7):c.6892C>T (p.Gln2298Ter) CHD7 Sep 18, 2014 Human Phenotype Ontology:HP:0000268,MedGen:C0221358;Human Phenotype Ontology:HP:0000821,MedGen:C0020676,Orphanet:ORPHA181396;Human Phenotype Ontology:HP:0000545,MedGen:C0027092,Orphanet:ORPHA98619;Human Phenotype Ontology:HP:0002370,MedGen:C0563243;Human Phenotype Ontology:HP:0001730,MedGen:C1842138;Human Phenotype Ontology:HP:0002650,MedGen:C0037932 Dolichocephaly;Hypothyroidism;Myopia;Poor coordination;Progressive hearing impairment;Scoliosis unknown 8 60854479 TACATGGAGGACGGAGATCCTTCAGTAGCTCAGCTCCTTCATGAAAGAACATTTGCCTTCT 61748425 153336 NM_004992.3(MECP2):c.508C>T (p.Gln170Ter) MECP2 Feb 18, 2008 MedGen:C0035372,OMIM:312750,Orphanet:ORPHA778,SNOMED CT:68618008 Rett syndrome de novo;unknown X 154031320 ACTGGGAGAGGGAGCCCCTCCCGGCGAGAGCAGAAACCACCTAAGAAGCCCAAATCTCCCA 104894743 26227 NM_139058.2(ARX):c.1058C>T (p.Pro353Leu) ARX Aug 13, 2002 MedGen:C3463992,OMIM:308350 Epileptic encephalopathy, early infantile, 1 germline X 25012937 TGGAGCGGGCCTTCCAGAAGACGCACTACCCGGACGTCTTCACCAGGTATGCGCGTAGGGT 368263958 177106 NM_138694.3(PKHD1):c.6499C>T (p.Gln2167Ter) PKHD1 Jan 16, 2014 MedGen:C0085548,OMIM:263200,Orphanet:ORPHA731,SNOMED CT:28770003 Autosomal recessive polycystic kidney disease germline 6 51909466 TGGACTTTATTTTGCATTTCAGGTAATCTGCAGCACTGTTTGTATTCCATGAGTGAGAAGA 137853320 26512 NM_005448.2(BMP15):c.631C>T (p.Gln211Ter) BMP15 May 01, 2006 MedGen:C1845295 Premature ovarian failure 4 germline X 50916059 AGGATCCTACGACTCCGTTTTATGTGTCAGCAGCAAAAAGATAGTGGTGGTCTTGAGCTCT 764719093 207110 NM_001080522.2(CC2D2A):c.2683C>T (p.Gln895Ter) CC2D2A Mar 04, 2014 MedGen:C2676788,OMIM:612285 Joubert syndrome 9 germline 4 15557361 CCTGATTTCTTTAGACTGGAGCAGCTGCAACAGGAGTTTAACTTTGTTTCAGATCAAGAAT 137853007 20631 NM_007194.3(CHEK2):c.433C>T (p.Arg145Trp) CHEK2 Sep 11, 2017 MedGen:CN239278;MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C0027672,SNOMED CT:699346009;MedGen:C0085390,Orphanet:ORPHA524,SNOMED CT:428850001;MedGen:C1836482,OMIM:609265;MedGen:CN517202;MedGen:CN169374 CHEK2-Related Cancer Susceptibility;Familial cancer of breast;Hereditary cancer-predisposing syndrome;Li-Fraumeni syndrome;Li-Fraumeni syndrome 2;not provided;not specified germline;unknown 22 28725254 AAATACCGAACATACAGCAAGAAACACTTTCGGATTTTCAGGGTAGGTAATGAATACCCAT 757674263 226935 NM_052867.3(NALCN):c.2203C>T (p.Arg735Ter) NALCN Apr 17, 2014 MeSH:D030342,MedGen:C0950123 Inborn genetic diseases germline 13 101111216 GGCTCCTTTTTTTTTCCTAGAGCTTGCACCCGACAGCGCATGCTGAGCGGATCATTTGAGG 72554309 103000 NM_000531.5(OTC):c.127C>T (p.Leu43Phe) OTC - MedGen:CN517202 not provided unknown X 38367340 AATAAAGTGCAGCTGAAGGGCCGTGACCTTCTCACTCTAAAAAACTTTACCGGAGAAGAAA 201230446 31840 NM_001361.4(DHODH):c.403C>T (p.Arg135Cys) DHODH Oct 03, 2016 MedGen:C0265257,OMIM:263750,SNOMED CT:66038001;MedGen:CN517202 Miller syndrome;not provided germline 16 72014641 CAGGAAGGAAACCCTAGACCCAGAGTCTTCCGCCTCCCTGAGGACCAAGCTGTCATTAACA 820878 18921 NM_000521.3(HEXB):c.185C>T (p.Ser62Leu) HEXB Apr 01, 1995 MedGen:C1849322 Sandhoff disease, infantile type germline 5 74685445 CGGGGCCGGCGCTGTGGCCCCTGCCGCTCTTGGTGAAGATGACCCCGAACCTGCTGCATCT 587783832 169992 NM_000252.2(MTM1):c.535C>T (p.Pro179Ser) MTM1 Feb 08, 2013 MedGen:C0410203,OMIM:310400,Orphanet:ORPHA596,SNOMED CT:46804001 Severe X-linked myotubular myopathy germline X 150641275 TTGAATTTCTTTTTTTCCTCACAGGGCTTGCCCAATCACCATTGGAGAATAACTTTTATTA -1 471672 NM_000206.2(IL2RG):c.562C>T (p.Gln188Ter) IL2RG Mar 15, 2017 MedGen:C1279481,OMIM:300400,SNOMED CT:203592006 X-linked severe combined immunodeficiency germline X 71110188 TTCTTGAACCACTGTTTGGAGCACTTGGTGCAGTACCGGACTGACTGGGACCACAGCTGGA 397515463 76941 NM_018127.6(ELAC2):c.1559C>T (p.Thr520Ile) ELAC2 Aug 08, 2013 MedGen:C3809526,OMIM:615440,Orphanet:ORPHA369913 Combined oxidative phosphorylation deficiency 17 germline 17 12996647 CGTCTCTGCTACTGGACTGTGGTGAGGGCACATTTGGGCAGCTGTGCCGTCATTACGGAGA 587776984 65660 NM_001349.3(DARS):c.1459C>T (p.Arg487Cys) DARS Jan 04, 2016 MedGen:C3809008,OMIM:615281,Orphanet:ORPHA363412;MedGen:CN517202 Hypomyelination with brainstem and spinal cord involvement and leg spasticity;not provided germline 2 135907363 ACTATGCTGTTTCTGGGATTGCATAATGTTCGTCAGACCTCCATGTTCCCTCGTGATCCCA 121918642 27894 NM_003126.3(SPTA1):c.82C>T (p.Arg28Cys) SPTA1 Jan 01, 1993 MedGen:C1851741,OMIM:130600;Human Phenotype Ontology:HP:0004839,MedGen:C0520739,OMIM:266140,SNOMED CT:9434008 Elliptocytosis 2;Hereditary pyropoikilocytosis germline 1 158685290 TTGGAAACAGCAGAAGAGATCCAGGAGAGGCGTCAGGAAGTGTTGACTCGGTATCAAAGTT 273585630 132432 NM_001127464.2(ZNF469):c.11615C>T (p.Pro3872Leu) ZNF469 - MedGen:C1835677,OMIM:148300 Keratoconus 1 germline 16 88439169 GACTGGGCAAGGCCTTCCCCCAGGGGAGACCCCTGCTCAGGCCCCCCAAGAGGGGCACAGC 768737101 214527 NM_003737.3(DCHS1):c.6988C>T (p.Arg2330Cys) DCHS1 Sep 03, 2015 Gene:352956,MedGen:C1843003,OMIM:607829 Mitral valve prolapse 2 germline 11 6625356 GATCCCTTCAGTGTTGGCCGCTATGGAGGCCGTGTCTCCCTCACGGGGCCCCTGGACTTTG -1 475692 NM_000051.3(ATM):c.1063C>T (p.Gln355Ter) ATM Jun 10, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 11 108247125 TTGATTGAATTGATGGCAGATATCTGTCACCAGGTACAGTAAGTAGGTCATGTCACATTTA -1 457669 NM_194456.1(KRIT1):c.1201C>T (p.Gln401Ter) KRIT1 May 18, 2017 MedGen:C1861784,OMIM:116860 Cerebral cavernous malformation germline 7 92225773 TCTCCATTAAATATTTGTGAAGAAAACAAACAAAACAACTGGGAAGAAGCTGCAAAATTGT 587779246 94788 NM_000179.2(MSH6):c.2764C>T (p.Arg922Ter) MSH6 Jun 26, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Hereditary cancer-predisposing syndrome;Lynch syndrome germline 2 47800747 TGGGATACAGCCTTTGACCATGAAAAGGCTCGAAAGACTGGACTTATTACTCCCAAAGCAG 63749923 95235 NM_000249.3(MLH1):c.1528C>T (p.Gln510Ter) MLH1 Sep 05, 2013 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Lynch syndrome germline 3 37028902 ATCATTAACCTCACTAGTGTTTTGAGTCTCCAGGAAGAAATTAATGAGCAGGGACATGAGG 28940893 18091 NM_000487.5(ARSA):c.1283C>T (p.Pro428Leu) ARSA Sep 29, 2017 na;MedGen:C0023522,OMIM:250100,Orphanet:ORPHA512,SNOMED CT:396338004;MedGen:C0751279,Orphanet:ORPHA309271,SNOMED CT:24326000;MedGen:C0751276,Orphanet:ORPHA309263,SNOMED CT:44359008;MedGen:CN517202 Arylsulfatase a, allele a;Metachromatic leukodystrophy;Metachromatic leukodystrophy, adult type;Metachromatic leukodystrophy, juvenile type;not provided germline;unknown 22 50625392 CCTCCAGCTCTCTGACTGCTCATGAGCCCCCGCTGCTCTATGACCTGTCCAAGGACCCTGG 370221310 440397 NM_000085.4(CLCNKB):c.1783C>T (p.Arg595Ter) CLCNKB Sep 14, 2016 MedGen:CN517202 not provided germline 1 16055461 CCAGAGTCCCAGATCCTGGTGGGCATAGTGCGAAGGGCCCAGCTGGTGCAGGCCCTGAAGG 587783275 167732 NM_018136.4(ASPM):c.8017C>T (p.Gln2673Ter) ASPM Feb 08, 2013 MedGen:C1837501,OMIM:608716 Primary autosomal recessive microcephaly 5 germline 1 197101234 GCAGTGCGTACCCAAGCAGTTATTTGTATACAGTCTTATTACAGAGGCTTTAAAGTACGAA 587783461 169263 NM_004380.2(CREBBP):c.1156C>T (p.Arg386Ter) CREBBP Feb 08, 2013 MedGen:C0035934,OMIM:180849,Orphanet:ORPHA353277,SNOMED CT:45582004 Rubinstein-Taybi syndrome germline 16 3793446 GAGGTTCGGGCCTGCTCGCTCCCGCATTGTCGAACCATGAAAAACGTTTTGAATCACATGA 199727342 187731 NM_001165963.1(SCN1A):c.4906C>T (p.Arg1636Ter) SCN1A Nov 09, 2015 MedGen:C1858673,OMIM:604403;MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002;MedGen:CN517202 Generalized epilepsy with febrile seizures plus, type 2;Severe myoclonic epilepsy in infancy;not provided de novo;germline 2 165992369 GAAAAGTATTTCGTGTCCCCTACCCTGTTCCGAGTGATCCGTCTTGCTAGGATTGGCCGAA 111033608 20670 NM_000154.1(GALK1):c.1144C>T (p.Gln382Ter) GALK1 Jan 01, 2000 MedGen:C0268155,OMIM:230200,Orphanet:ORPHA79237,SNOMED CT:124302001 Deficiency of galactokinase germline 17 75758091 TACGGCGGGACTGCCACCTTCTACCTCTCTCAAGCAGCCGATGGAGCCAAGGTGCTGTGCT 1057518075 359399 NM_000090.3(COL3A1):c.1471C>T (p.Arg491Ter) COL3A1 Oct 20, 2016 MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000;MedGen:CN517202 Ehlers-Danlos syndrome, type 4;not provided germline;paternal 2 188995061 TTTCATTATTTTCAGGGTGCCCCTGGGTTCCGAGGACCTGCTGGACCAAATGGCATCCCAG 61752112 22818 NM_000286.2(PEX12):c.949C>T (p.Leu317Phe) PEX12 Jun 08, 2004 MedGen:C3551381 Peroxisomal biogenesis disorder 3b germline 17 35575913 TGTCGTAAAACCCGGGTGAATGATACTGTTCTTGCCACCTCTGGCTATGTGTTTTGTTACC 387907154 40215 NM_001099274.1(TINF2):c.811C>T (p.Gln271Ter) TINF2 May 01, 2012 MedGen:C3151445,OMIM:613990 Dyskeratosis congenita, autosomal dominant, 3 germline 14 24240669 GCCCCTCTAGGCCGACGAAGAGTTCAGTCCCAATGGGCCTCCACTAGGGGAGGCCATAAGG 121908176 19610 NM_031885.3(BBS2):c.175C>T (p.Gln59Ter) BBS2 May 04, 2017 MedGen:C0752166,OMIM:209900,Orphanet:ORPHA110,SNOMED CT:5619004;MedGen:C2936863,OMIM:615981 Bardet-Biedl syndrome;Bardet-Biedl syndrome 2 germline 16 56514623 AACCAGCATGTCAGTGCATCCAGGGTCTTCCAGAGCCCCCTGGAATCTGATGTTTCTCTTC 397514736 75263 NM_213599.2(ANO5):c.1541C>T (p.Thr514Ile) ANO5 Jun 01, 2013 MedGen:C1833736,OMIM:166260,Orphanet:ORPHA53697 Gnathodiaphyseal dysplasia germline 11 22259652 TCAAAAGCTTCCTTACTCCTCAGATAACCACATCACTCACAGGATCATGCTTGAACTTTAT 200483989 286483 NM_000341.3(SLC3A1):c.808C>T (p.Arg270Ter) SLC3A1 Jun 14, 2016 Human Phenotype Ontology:HP:0003131,MedGen:C0010691,OMIM:220100,Orphanet:ORPHA214,SNOMED CT:85020001 Cystinuria germline 2 44286074 GGAAACTCCAGTTGGCACTTTGACGAAGTGCGAAACCAATGTTATTTTCATCAGTTTATGA 587777553 150286 NM_004309.5(ARHGDIA):c.358C>T (p.Arg120Ter) ARHGDIA Mar 10, 2015 MedGen:C3808953,OMIM:615244 Nephrotic syndrome, type 8 germline 17 81869230 TGATCCTCGCTTCGGGTCCTGCAGGTTAACCGAGAGATAGTGTCCGGCATGAAGTACATCC 1064794287 447521 NM_001100.3(ACTA1):c.553C>T (p.Arg185Cys) ACTA1 Jun 04, 2017 MedGen:C3711389,OMIM:161800,Orphanet:ORPHA98904 Nemaline myopathy 3 germline 1 229432333 CACGCCATCATGCGCCTGGACCTGGCGGGCCGCGATCTCACCGACTACCTGATGAAGATCC 77409459 22232 NM_000492.3(CFTR):c.1013C>T (p.Thr338Ile) CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008;MedGen:CN169374 Cystic fibrosis;not specified germline;unknown 7 117540243 TCAAAGGAATCATCCTCCGGAAAATATTCACCACCATCTCATTCTGCATTGTTCTGCGCAT 104894824 25485 NM_000166.5(GJB1):c.164C>T (p.Thr55Ile) GJB1 Feb 21, 2017 MedGen:C0393808,OMIM:302800,Orphanet:ORPHA101075,SNOMED CT:230552007;MedGen:CN517202 X-linked hereditary motor and sensory neuropathy;not provided germline X 71223871 GTGATGAGAAATCTTCCTTCATCTGCAACACACTCCAGCCTGGCTGCAACAGCGTTTGCTA 1060501536 397974 NM_000051.3(ATM):c.6658C>T (p.Gln2220Ter) ATM Jul 05, 2016 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0027672,SNOMED CT:699346009 Ataxia-telangiectasia syndrome;Hereditary cancer-predisposing syndrome germline 11 108325395 CAGCTTCTCAAGGACAGTGATTTTAGTTTTCAGGAGCCTATCATGGCTCTACGCACAGTCA 1064794217 408712 NM_000020.2(ACVRL1):c.1336C>T (p.Gln446Ter) ACVRL1 Jul 24, 2017 MedGen:C1838163,OMIM:600376;MedGen:CN517202 Hereditary hemorrhagic telangiectasia type 2;not provided germline 12 51919074 GAGGACATGAAGAAGGTGGTGTGTGTGGATCAGCAGACCCCCACCATCCCTAACCGGCTGG 281865132 49450 NM_000530.7(MPZ):c.649C>T (p.Pro217Ser) MPZ Mar 26, 2015 MedGen:C0270912,OMIM:118200,Orphanet:ORPHA101082,SNOMED CT:42986003 Charcot-Marie-Tooth disease, demyelinating, type 1b germline 1 161305974 TGACTGATGTGTGCGCCCCTCCCCCAGACGCCAGTGCTGTATGCAATGCTGGACCACAGCA 199476194 47878 NM_207352.3(CYP4V2):c.958C>T (p.Arg320Ter) CYP4V2 Apr 12, 2012 MedGen:C1859486,OMIM:210370,Orphanet:ORPHA41751 Bietti crystalline corneoretinal dystrophy not provided 4 186201313 GAAGGGAACAGGCTAAGTCATGAAGATATTCGAGAAGAAGTTGACACCTTCATGTTTGAGG 1057518783 360990 NM_001009944.2(PKD1):c.5086C>T (p.Gln1696Ter) PKD1 Jun 08, 2016 Human Phenotype Ontology:HP:0000113,MedGen:C0022680 Polycystic kidney dysplasia unknown 16 2110081 ACCGTGCTCGAGGCCGGCACCTACCATGTGCAGCTGCGGGCCACCAACATGCTGGGCAGCG 104894642 20149 NM_000199.3(SGSH):c.383C>T (p.Pro128Leu) SGSH Apr 01, 2003 MedGen:C0086647,OMIM:252900,Orphanet:ORPHA79269,SNOMED CT:41572006 Mucopolysaccharidosis, MPS-III-A germline 17 80214738 CAGGCATCATCGGGAAGAAGCACGTGGGGCCGGAGACCGTGTACCCGTTTGACTTTGCGTA 121917714 28867 NM_000168.5(GLI3):c.2374C>T (p.Arg792Ter) GLI3 Mar 29, 2017 MedGen:C0265306,OMIM:175700,SNOMED CT:32985001;MedGen:CN517202 Greig cephalopolysyndactyly syndrome;not provided germline 7 41967653 AGGCTAAAACAAGTGAATGGAATGTTTCCGCGACTGAACCCCATTCTACCCCCTAAAGCCC 397514687 59367 NM_031850.3(AGTR1):c.481C>T (p.Arg161Ter) AGTR1 May 02, 2013 Human Phenotype Ontology:HP:0008660,MedGen:C0266313,OMIM:267430,SNOMED CT:204949001 Renal dysplasia germline 3 148741411 GTGTTTCTACTCACGTGTCTCAGCATTGATCGATACCTGGCTATTGTTCACCCAATGAAGT 886039432 259779 NM_001080517.2(SETD5):c.1333C>T (p.Arg445Ter) SETD5 Jul 21, 2016 MedGen:CN517202 not provided germline 3 9445193 ATTGGAGCAGAGACTAGACGTAGAAAAGCACGACGGAAAGAGCTAGAGATGGAGCAGCAGA 372392424 227472 NM_001127178.2(PIGG):c.2005C>T (p.Arg669Cys) PIGG Apr 29, 2016 MedGen:C4310794,OMIM:616917 Mental retardation, autosomal recessive 53 germline 4 523849 TGGCTAATACTGGCCTGCTGCCGGCTGCTGCGCTCCCTAAACCAGACAGGTGTGCAGTGGG 387907128 40134 NM_145239.2(PRRT2):c.796C>T (p.Arg266Trp) PRRT2 Dec 01, 2011 MedGen:C1868682,OMIM:128200 Dystonia 10 germline 16 29813850 GTGGAGGGGGGTGAAGGCACCCAGAAACCTCGGGACTACATCATCCTTGCCATCCTGTCCT 374390376 39532 NM_001195794.1(CLRN1):c.92C>T (p.Pro31Leu) CLRN1 Jul 01, 2011 MedGen:C3280041,OMIM:614180 Retinitis pigmentosa 61 germline 3 150972617 CCCTCGGAGTTGTGACAGCCTTGGGGACACCGTTGTGGATCAAAGCCACTGTCCTCTGCAA 1064796451 407132 NM_003718.4(CDK13):c.2209C>T (p.Arg737Cys) CDK13 Feb 16, 2017 MedGen:CN517202 not provided germline 7 40001887 ATAGGAGAAATGGTAGCCTTAAAAAAAGTACGTCTGGATAATGAAAAGGAAGGCTTTCCAA 137853123 16447 NM_153609.3(TMPRSS6):c.1795C>T (p.Arg599Ter) TMPRSS6 Sep 01, 2008 Human Phenotype Ontology:HP:0001935,MedGen:C0085576,OMIM:206200,Orphanet:ORPHA209981,SNOMED CT:234349007 Microcytic anemia germline 22 37070557 CCATGGCAGGCCAGCCTCCAGGTTCGGGGTCGACACATCTGTGGGGGGGCCCTCATCGCTG 72551349 27308 NM_000463.2(UGT1A1):c.1021C>T (p.Arg341Ter) UGT1A1 Nov 01, 2003 MedGen:C0010324,OMIM:218800,Orphanet:ORPHA79234;MedGen:C0017551,OMIM:143500,SNOMED CT:27503000 Crigler Najjar syndrome, type 1;Gilbert's syndrome germline 2 233767873 TCCCAGGTCCTGTGGCGGTACACTGGAACCCGACCATCGAATCTTGCGAACAACACGATAC 727502766 172191 NM_005360.4(MAF):c.161C>T (p.Ser54Leu) MAF May 07, 2015 MedGen:C1832812,OMIM:601088,Orphanet:ORPHA477668 Ayme-gripp syndrome germline;unknown 16 79599742 GCCAGTGCGGCCGTCTCATCGCCGGGGGCTCGCTGTCCTCCACCCCCATGAGCACGCCGTG 398123221 98474 NM_000169.2(GLA):c.748C>T (p.Gln250Ter) GLA Dec 28, 2012 Human Phenotype Ontology:HP:0001071,MedGen:C0002986,OMIM:301500,Orphanet:ORPHA324,SNOMED CT:16652001 Fabry disease germline X 101398838 AAGAGTATCTTGGACTGGACATCTTTTAACCAGGAGAGAATTGTTGATGTTGCTGGACCAG 121912648 27734 NM_003235.4(TG):c.886C>T (p.Arg296Ter) TG Apr 12, 2017 MedGen:C0342194,OMIM:274700,SNOMED CT:23536000;MedGen:CN169287;MedGen:CN517202 Iodotyrosyl coupling defect;Thyroid dyshormonogenesis;not provided germline 8 132882609 GCAGTTCAATCAGTCATCTCTGGCAGATTCCGATGTAAGTAATAAACTGCCAACAATGTGC 72549398 360825 NM_003742.2(ABCB11):c.3148C>T (p.Arg1050Cys) ABCB11 Jun 18, 2015 Human Phenotype Ontology:HP:0200148,MedGen:C2750654;Human Phenotype Ontology:HP:0001406,MedGen:C0008372;Human Phenotype Ontology:HP:0000989,MedGen:C0033774 Abnormal liver function tests during pregnancy;Intrahepatic cholestasis;Pruritus unknown 2 168932442 AGTTATGCAAAAGCTAAAATATCAGCTGCACGCTTTTTTCAACTGCTGGACCGACAACCCC 387907147 40190 NM_014639.3(TTC37):c.439C>T (p.Gln147Ter) TTC37 Jun 01, 2010 MedGen:CN034858,OMIM:222470 Trichohepatoenteric syndrome 1 germline 5 95540794 CGAACATGGCACAAGTTGATAAAAACACGGCAGGAACAAGGTGCAGAAAATGAAGAGCTTC 587777805 17084 NM_032146.5(ARL6):c.266C>T (p.Ala89Val) ARL6 Apr 15, 2011 MedGen:C3150808,OMIM:613575 Retinitis pigmentosa 55 germline 3 97784966 TTTTCTTTACATTACACAGAGAAGGCCAAGCTATTATTTTTGTCATTGATAGTAGTGATAG 879254871 246112 NM_000527.4(LDLR):c.1342C>T (p.Gln448Ter) LDLR Mar 30, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11113433 AGCAATAGAATCTACTGGTCTGACCTGTCCCAGAGAATGATCTGCAGGTGAGCGTCGCCCC 281865365 104899 NM_000330.3(RS1):c.637C>T (p.Arg213Trp) RS1 Sep 29, 2017 MedGen:CN517202 not provided germline X 18642042 CCGCTGGGCTGGCACGTCCGCATTGCCATCCGGATGGAGCTGCTGGAGTGCGTCAGCAAGT 104894711 21353 NM_001022.3(RPS19):c.184C>T (p.Arg62Trp) RPS19 May 30, 2017 MedGen:C2676137,OMIM:105650;MedGen:CN517202 Diamond-Blackfan anemia 1;not provided germline 19 41869042 CCTCTCACACTACCCCCAGCTTCCACAGCGCGGCACCTGTACCTCCGGGGTGGCGCTGGGG 797045094 205164 NM_000235.3(LIPA):c.253C>T (p.Gln85Ter) LIPA Feb 25, 2015 MedGen:C0043208,OMIM:278000,Orphanet:ORPHA275761 Lysosomal acid lipase deficiency germline 10 89228375 TTTTCAGGTCCCAAACCAGTTGTCTTCCTGCAACATGGCTTGCTGGCAGATTCTAGTAACT 794727405 193057 NM_015560.2(OPA1):c.2569C>T (p.Arg857Ter) OPA1 Oct 09, 2014 MedGen:C0338508,OMIM:165500,Orphanet:ORPHA98672,SNOMED CT:2065009;MedGen:CN517202 Dominant hereditary optic atrophy;not provided germline 3 193664952 AAAACAGCTCTAAACCATTGTAACCTTTGTCGAAGAGGTTTTTATTACTACCAAAGGCATT 876660601 235981 NM_007294.3(BRCA1):c.4162C>T (p.Gln1388Ter) BRCA1 Sep 04, 2015 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 17 43090967 GTCTCTGAAGACTGCTCAGGGCTATCCTCTCAGAGTGACATTTTAACCACTCAGGTAAAAA -1 446312 NM_032195.2(SON):c.6022C>T (p.Arg2008Ter) SON Oct 30, 2017 MedGen:CN517202 not provided germline 21 33555253 CGGAGAAGATCAAGGTCTGTGGTAAGAAGACGAAGCTTCAGTATCTCACCAGTCAGATTAA 80338643 18852 NM_000081.3(LYST):c.148C>T (p.Arg50Ter) LYST Feb 16, 2012 MedGen:CN068761;MedGen:C0007965,OMIM:214500,Orphanet:ORPHA167,SNOMED CT:111396008 Chediak-Higashi syndrome, childhood type;Chédiak-Higashi syndrome germline 1 235830270 GCAACCCTTGGACAGTACCTTGTCCATGGTCGAGGATTTCTATTACTTACCAAGCTAAATT 527236148 152917 NM_000334.4(SCN4A):c.664C>T (p.Arg222Trp) SCN4A Jul 31, 2014 MedGen:C2750061,OMIM:613345 Hypokalemic periodic paralysis, type 2 germline 17 63971201 TTGGGCAACATCTCAGCCCTGAGGACCTTCCGGGTGCTGCGGGCCCTCAAAACCATCACGG 1135401925 424772 NM_000059.3(BRCA2):c.8245C>T (p.Gln2749Ter) BRCA2 Jan 31, 2014 MedGen:C0677776,Orphanet:ORPHA145 Hereditary breast and ovarian cancer syndrome germline 13 32363447 GTCTTAAAGAATGGCAGACTGACAGTTGGTCAGAAGATTATTCTTCATGGAGCAGAACTGG 886043986 272948 NM_003742.2(ABCB11):c.22C>T (p.Arg8Ter) ABCB11 Jun 09, 2016 MedGen:C2608083,OMIM:605479,Orphanet:ORPHA99961;MedGen:C1866138,OMIM:601847 Benign recurrent intrahepatic cholestasis 2;Progressive familial intrahepatic cholestasis 2 germline 2 169018104 GCAATTACCATGTCTGACTCAGTAATTCTTCGAAGTATAAAGAAATTTGGAGAGGAGAATG -1 487591 NM_000138.4(FBN1):c.2860C>T (p.Arg954Cys) FBN1 Dec 28, 2016 MedGen:CN229799 Marfan Syndrome/Loeys-Dietz Syndrome/Familial Thoracic Aortic Aneurysms and Dissections germline 15 48490073 AACCTCCCTTGATTCCCTCTGACAGATATCCGCCTGGAAACCTGCTTCCTGAGGTACGAGG 752492870 268739 NM_000232.4(SGCB):c.31C>T (p.Gln11Ter) SGCB Jun 14, 2016 MedGen:CN239352;MedGen:C1858593,OMIM:604286,Orphanet:ORPHA119 Limb-Girdle Muscular Dystrophy, Recessive;Limb-girdle muscular dystrophy, type 2E germline 4 52038229 ATGGCGGCAGCGGCGGCGGCGGCTGCAGAACAGGTCTGTGAGTACCGCCGCGGCCGCGGGC 797044787 195889 NM_000425.4(L1CAM):c.924C>T (p.Gly308=) L1CAM Feb 10, 2015 MedGen:C0265216,OMIM:307000,Orphanet:ORPHA2182,SNOMED CT:71779008 X-linked hydrocephalus syndrome germline X 153870123 GCTGCTGAAAGTGGGCGAGGAGGATGATGGCGAGTACCGCTGCCTGGCCGAGAACTCACTG 398122886 45767 NM_005543.3(INSL3):c.217C>T (p.Arg73Ter) INSL3 Nov 01, 2000 Human Phenotype Ontology:HP:0000028,MedGen:C0010417,OMIM:219050 Cryptorchidism, unilateral or bilateral germline 19 17817033 CCAGGTGAGTTGCTACAGTGGCTGGAGAGACGACATCTGCTCCATGGGCTGGTGGCCGACA 606231438 170979 NM_152296.4(ATP1A3):c.2411C>T (p.Thr804Ile) ATP1A3 May 04, 2014 MedGen:C3553788,OMIM:614820 Alternating hemiplegia of childhood 2 de novo 19 41970395 CCATCACCATCCTCTGCATCGATCTGGGCACTGACATGGTGAGCCCTGGCAGCCACCCTTG 866521873 240926 NM_000051.3(ATM):c.1240C>T (p.Gln414Ter) ATM Jan 03, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0027672,SNOMED CT:699346009 Ataxia-telangiectasia syndrome;Hereditary cancer-predisposing syndrome germline 11 108250705 AAATTATCCTTTTTTTTTTTTTTTAGGCTACAGATTGCAACCCAATTAATATCAAAGTATC 121908486 20828 NM_014270.4(SLC7A9):c.782C>T (p.Pro261Leu) SLC7A9 Apr 01, 2003 Human Phenotype Ontology:HP:0003131,MedGen:C0010691,OMIM:220100,Orphanet:ORPHA214,SNOMED CT:85020001 Cystinuria germline 19 32859932 ACCTGCCTTTGGCCATTATCATCGGGATCCCCCTGGTGACGGCGTGCTACATCCTCATGAA 80356873 70287 NM_007294.3(BRCA1):c.5536C>T (p.Gln1846Ter) BRCA1 Sep 08, 2016 MedGen:C2676676,OMIM:604370 Breast-ovarian cancer, familial 1 germline;unknown 17 43045734 GAGTGGGTGTTGGACAGTGTAGCACTCTACCAGTGCCAGGAGCTGGACACCTACCTGATAC 199474660 24631 m.3303C>T MT-TL1 Aug 01, 1999 MedGen:CN069301 Cardiomyopathy with or without skeletal myopathy germline MT 3303 TACAGTCAGAGGTTCAATTCCTCTTCTTAACAACATACCCATGGCCAACCTCCTACTCCTC 1033229812 482217 NM_032195.2(SON):c.5767C>T (p.Arg1923Ter) SON Dec 07, 2017 MedGen:CN517202 not provided germline 21 33554998 GATAACCGAAAGACAGTTAGAGCTCGAAGTCGAACCCCAAGTCGTCGGAGTCGGAGTCATA 143473232 214145 NM_002109.5(HARS):c.395C>T (p.Thr132Ile) HARS Aug 01, 2015 MedGen:C4225265,OMIM:616625 Charcot-Marie-Tooth disease, axonal, type 2w germline 5 140679789 GGGAGCTCCTGTCCCTTCGCTATGACCTCACTGTATCTTTCTAAACTTGGGCTCTTGAGAC 759518184 481579 NM_000228.2(LAMB3):c.430C>T (p.Arg144Ter) LAMB3 May 08, 2017 MedGen:CN517202 not provided germline 1 209634581 GAGCGCTCCTCAGACTTCGGTAAGACCTGGCGAGTGTACCAGTACCTGGCTGCCGACTGCA 886039782 260472 NM_001142298.1(SQSTM1):c.34C>T (p.Arg12Ter) SQSTM1 Oct 10, 2016 MedGen:C4310693,OMIM:617145 Neurodegeneration with ataxia, dystonia, and gaze palsy, childhood-onset germline 5 179823038 GCCATGTCCTACGTGAAGGATGACATCTTCCGAATCTACATTAAAGGTAAGGGGCTGCTCT 104894429 21033 NM_014252.3(SLC25A15):c.535C>T (p.Arg179Ter) SLC25A15 May 31, 2012 MedGen:C0268540,OMIM:238970,Orphanet:ORPHA415,SNOMED CT:30287008 Hyperornithinemia-hyperammonemia-homocitrullinuria syndrome germline 13 40807376 TTCTACCATGGACTCTCAAGCACTTTACTTCGAGAAGTACCAGGCTATTTCTTCTTCTTCG 886037979 249163 NM_007294.3(BRCA1):c.784C>T (p.Gln262Ter) BRCA1 Sep 08, 2016 MedGen:C2676676,OMIM:604370 Breast-ovarian cancer, familial 1 germline 17 43094747 CGTGCAGCTGAGAGGCATCCAGAAAAGTATCAGGGTAGTTCTGTTTCAAACTTGCATGTGG 749922789 432464 NM_018116.3(MSTO1):c.1033C>T (p.Arg345Cys) MSTO1 Sep 22, 2017 MedGen:CN484737,OMIM:617675 MYOPATHY, MITOCHONDRIAL, AND ATAXIA germline 1 155612910 ACAGCCCTGGACACAGTCACTGTTCCTTATCGCCTGTGTTCCTCTCCAGTTTCCATGGTTC 797045706 208405 NM_017777.3(MKS1):c.844C>T (p.Arg282Ter) MKS1 May 14, 2014 MedGen:C3714506,OMIM:249000 Meckel syndrome type 1 germline 17 58212996 GCACAGCCGGAGGAGGAGGAGCGGGAACGGCGAGTGTTCAAGGATGTAAGCGCAAGTTCAT 886039406 260292 NM_000425.4(L1CAM):c.523+12C>T L1CAM Apr 24, 2017 MedGen:CN517202 not provided germline X 153871045 ATCTACTGGATGAACAGCAGTGGGTGCCGGCGAGCGGCTGCCTCGTGGGGTCGGGGTGTTA 755226061 440858 NM_000297.3(PKD2):c.2614C>T (p.Arg872Ter) PKD2 Nov 15, 2016 MedGen:CN517202 not provided germline 4 88074903 GCCGTGATCGTGAAGCTAGAGATTATGGAGCGAGCCAAACTGAAGAGGAGGGAGGTGCTGG 60682848 57238 NM_005572.3(LMNA):c.673C>T (p.Arg225Ter) LMNA Jul 25, 2017 MedGen:CN043576;MedGen:C1449563,OMIM:115200,Orphanet:ORPHA300751;MedGen:C1834653,OMIM:159001,Orphanet:ORPHA264;EFO:EFO_0000407,Human Phenotype Ontology:HP:0001644,MedGen:C0007193,Orphanet:ORPHA217604,SNOMED CT:195021004;MedGen:CN517202 Charcot-Marie-Tooth disease, type 2;Dilated cardiomyopathy 1A;Limb-girdle muscular dystrophy, type 1B;Primary dilated cardiomyopathy;not provided germline 1 156134838 CTGCGTGAGACCAAGCGCCGTCATGAGACCCGACTGGTGGAGATTGACAATGGGAAGCAGC 386833517 70675 NM_000170.2(GLDC):c.1009C>T (p.Arg337Ter) GLDC Mar 31, 2017 Human Phenotype Ontology:HP:0008288,MedGen:C0751748,OMIM:605899,Orphanet:ORPHA407,SNOMED CT:237939006;MedGen:CN517202 Non-ketotic hyperglycinemia;not provided germline 9 6604637 GGGGGACCCCATGCAGCATTTTTTGCTGTCCGAGAAAGCTTGGTGAGAATGATGCCTGGAA 63751442 94735 NM_000179.2(MSH6):c.2191C>T (p.Gln731Ter) MSH6 Apr 07, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Hereditary cancer-predisposing syndrome;Lynch syndrome germline 2 47800174 AGATCTGGTGCTATCTTCACCAAAGCCTATCAACGAATGGTGCTAGATGCAGTGACATTAA 180177100 133574 NM_024675.3(PALB2):c.1240C>T (p.Arg414Ter) PALB2 Jul 31, 2017 MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C1835817,OMIM:610832;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:C3150547,OMIM:613348;MedGen:C1861028,OMIM:189960;MedGen:CN517202 Familial cancer of breast;Familial cancer of breast;Fanconi anemia, complementation group N;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;Pancreatic cancer 3;Tracheoesophageal fistula;not provided germline;unknown 16 23635306 TTTCCTGCAGAATATTATGTTAGAACAACACGAAGCATGTCCAATTGCCAGAGGAAAGTAG 398123953 100523 NM_004006.2(DMD):c.4375C>T (p.Arg1459Ter) DMD Jun 17, 2014 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Duchenne muscular dystrophy germline X 32389644 AAAAAATTACAAGATGTCTCCATGAAGTTTCGATTATTCCAGAAACCAGCCAATTTTGAGC 879254880 246127 NM_000527.4(LDLR):c.1363C>T (p.Gln455Ter) LDLR Mar 25, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11113539 GATGCCCTTCTCTCCTCCTGCCTCAGCACCCAGCTTGACAGAGCCCACGGCGTCTCTTCCT 367570129 181166 NM_144988.3(ALG14):c.310C>T (p.Arg104Ter) ALG14 Apr 27, 2015 MedGen:C4015596,OMIM:616227 Myasthenic syndrome, congenital, 15 germline 1 95027239 TCCTTCTAGTATACCAAATACTACATTCACCGAATTCCAAGAAGCCGGGAGGTTCAGCAGT 1057518745 359111 NM_014339.6(IL17RA):c.196C>T (p.Arg66Ter) IL17RA Dec 19, 2016 MedGen:C3151402,OMIM:613953 Immunodeficiency 51 germline 22 17097829 ACCTGCCTGGATGACAGCTGGATTCACCCTCGAAACCTGACCCCCTCCTCCCCAAAGGACC 28933972 28813 NM_006194.3(PAX9):c.76C>T (p.Arg26Trp) PAX9 Aug 01, 2009 MedGen:C1970291,OMIM:604625 Tooth agenesis, selective, 3 germline 14 36662968 GTGAACGGGAGGCCGCTGCCCAACGCCATCCGGCTTCGCATCGTGGAACTGGCCCAACTGG 587784534 169100 NM_130838.1(UBE3A):c.964C>T (p.Gln322Ter) UBE3A Feb 08, 2013 MedGen:C0162635,OMIM:105830,Orphanet:ORPHA72,SNOMED CT:76880004 Angelman syndrome germline 15 25371150 CAGATTCGGAGAATGATGGAGACATTTCAGCAACTTATTACTTATAAAGTCATAAGCAATG 530109812 424251 NM_148897.2(SDR9C7):c.214C>T (p.Arg72Trp) SDR9C7 Jul 14, 2017 MedGen:CN321864,OMIM:617574 ICHTHYOSIS, CONGENITAL, AUTOSOMAL RECESSIVE 13 germline 12 56934048 TCCCAGAAACTTCAGCGGGATACCTCCTATCGGCTGCAGACCACCCTACTGGATGTCACCA 863225092 214087 NM_001001523.1(RORC):c.1258C>T (p.Gln420Ter) RORC Aug 07, 2015 MedGen:C4225266,OMIM:616622,Orphanet:ORPHA477857 Immunodeficiency 42 germline 1 151811399 CCAGGGCTCCAAGAGAAAAGGAAAGTAGAACAGCTGCAGTACAATCTGGAGCTGGCCTTTC 202126574 17100 NM_152443.2(RDH12):c.377C>T (p.Ala126Val) RDH12 Feb 15, 2009 Human Phenotype Ontology:HP:0000547,MeSH:D012174,MedGen:C0035334,OMIM:268000,Orphanet:ORPHA791,SNOMED CT:28835009;MedGen:C3150208 Retinitis pigmentosa;Retinitis pigmentosa 53 germline 14 67726084 AAAAGCAGCTCCATATTCTGATCAACAATGCGGGAGTAATGATGTGTCCATATTCCAAGAC 80356625 23707 NM_000525.3(KCNJ11):c.601C>T (p.Arg201Cys) KCNJ11 Feb 08, 2013 Human Phenotype Ontology:HP:0000819,MedGen:C0011849,SNOMED CT:73211009;MedGen:C1833102;MedGen:C1833104,OMIM:606176,Orphanet:ORPHA99885 Diabetes mellitus;Diabetes mellitus, permanent neonatal, with neurologic features;Permanent neonatal diabetes mellitus germline 11 17387491 CTGCGCCACGGCCGCCTCTGCTTCATGCTACGTGTGGGTGACCTCCGCAAGAGCATGATCA 111033818 36659 NM_000155.3(GALT):c.1057C>T (p.Gln353Ter) GALT Jan 25, 2016 MedGen:C0268151,OMIM:230400,Orphanet:ORPHA79239,SNOMED CT:124354006 Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase unknown 9 34649562 GCTCAGGCTCAGAGGGACCTCACCCCTGAGCAGGTCAGGACTCAGAACAGTCTGGCGTCTC 587784062 168326 NM_133433.3(NIPBL):c.892C>T (p.Gln298Ter) NIPBL Feb 08, 2013 MedGen:CN029798,OMIM:122470 Cornelia de Lange syndrome 1 germline 5 36975799 TTTCTAGGCTCAAGACCACCTTTAATCCTACAATCTCAGTCTCTACCTTGTTCATCACCTC 121908282 16271 NM_152419.2(HGSNAT):c.848C>T (p.Pro283Leu) HGSNAT Sep 26, 2017 MedGen:C0086649,OMIM:252930,Orphanet:ORPHA79271,SNOMED CT:75238000;Human Phenotype Ontology:HP:0000556,MedGen:C0854723,Orphanet:ORPHA71862,SNOMED CT:314407005;MedGen:CN517202 Mucopolysaccharidosis, MPS-III-C;Retinal dystrophy;not provided germline;unknown 8 43173740 CAGGGCTGACAGTGGCTGACCTCGTGTTCCCGTGGTGAGTTGCCGGTCTGCCCTCTTCTCT 121908146 19409 NM_001243133.1(NLRP3):c.1316C>T (p.Ala439Val) NLRP3 Jul 24, 2017 MedGen:C0343068,OMIM:120100,Orphanet:ORPHA47045,SNOMED CT:238687000;MedGen:CN517202 Familial cold urticaria;not provided germline 1 247424765 GCCTTGCCCAGACATCCAAGACCACCACCGCGGTGTACGTCTTCTTCCTTTCCAGTTTGCT 1131692171 424188 NM_015909.3(NBAS):c.586C>T (p.Gln196Ter) NBAS Jul 11, 2017 MedGen:C3541319,OMIM:614800,Orphanet:ORPHA391677 Short stature, optic nerve atrophy, and Pelger-Huet anomaly unknown 2 15536479 TTGATATTTTTAGAATATAAAGCAAGTGCACAGTGGTCTGCAGAACTCCTGGTCATCAATT 137852416 25261 NM_000132.3(F8):c.1636C>T (p.Arg546Trp) F8 Jan 01, 1995 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154957073 GTAGAAGATGGGCCAACTAAATCAGATCCTCGGTGCCTGACCCGCTATTACTCTAGTTTCG 119471022 19167 NM_022081.5(HPS4):c.541C>T (p.Gln181Ter) HPS4 Oct 11, 2012 MedGen:C3484357,OMIM:614073 Hermansky-Pudlak syndrome 4 germline 22 26470774 CTGTTGTTGCTGAAGGCAGCCCGCATTCTGCAGACCTGCCAGCGCTCGCCTCACATTCTCG 137853039 21921 NM_001429.3(EP300):c.1942C>T (p.Arg648Ter) EP300 Apr 01, 2005 MedGen:C3150941,OMIM:613684,Orphanet:ORPHA353284 Rubinstein-Taybi syndrome 2 germline 22 41141111 TATAAGATCCAGAAAGAACTAGAAGAAAAACGAAGGACCAGACTACAGAAGCAGAACATGC 864309687 213991 NM_021954.3(GJA3):c.260C>T (p.Thr87Met) GJA3 Jan 09, 2015 Human Phenotype Ontology:HP:0000519,MedGen:C1842324 Congenital cataract inherited 13 20143029 TCTGGGCGCTGCAGATCATCTTCGTGTCCACGCCCACCCTCATCTACCTGGGCCACGTGCT -1 427067 NM_001171.5(ABCC6):c.595C>T (p.Gln199Ter) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16214329 CAACCCCCCTTCTTCCCTGAAGACCCCCAGCAGTCTGTAAGTCACCAAGTTCCAACCTCAT 121918316 21432 NM_006772.2(SYNGAP1):c.1735C>T (p.Arg579Ter) SYNGAP1 Aug 02, 2016 MedGen:C2675473,OMIM:612621;MedGen:CN517202 Mental retardation, autosomal dominant 5;not provided germline 6 33440787 TTTGCTTCGTGGCGGCTGCGCTGCGCAGAGCGAGGCCGGGAGGACATCGCAGACAGGCTTA 587783361 167917 NM_003688.3(CASK):c.2074C>T (p.Gln692Ter) CASK Feb 08, 2013 MedGen:C2677903,OMIM:300749,Orphanet:ORPHA163937 Mental retardation and microcephaly with pontine and cerebellar hypoplasia germline X 41542772 GTAGCTTGCATTGCCATGGAGAAGACCAAACAGGAGCAGCAGGCCAGCTGTACTTGGTTTG 397518472 94311 NM_000833.4(GRIN2A):c.2041C>T (p.Arg681Ter) GRIN2A Dec 23, 2015 MedGen:C1832814,OMIM:245570;MedGen:CN517202 Epilepsy, focal, with speech disorder and with or without mental retardation;not provided germline 16 9822391 CAGAGACCTCATGACTATTCCCCACCTTTTCGATTTGGGACAGTGCCTAATGGAAGCACGG 745854387 213899 NM_001203.2(BMPR1B):c.91C>T (p.Arg31Cys) BMPR1B Jun 24, 2015 MedGen:C4225404,OMIM:609441 Acromesomelic dysplasia, Demirhan type germline 4 95104515 ACAGCCCCCACCCCCCGTCCAAAGGTCTTGCGTTGTAAATGCCACCACCATTGTCCAGAAG 727505396 178394 NM_001083962.1(TCF4):c.1438C>T (p.Gln480Ter) TCF4 May 17, 2016 MedGen:C1970431,OMIM:610954,Orphanet:ORPHA2896 Pitt-Hopkins syndrome de novo;germline 18 55234596 AACCAGGTTCCGGTTCCACAGCTTCCTGTCCAGTCTGCGACTTCCCCTGACCTGAACCCAC 146559223 247515 NM_003504.4(CDC45):c.893C>T (p.Ala298Val) CDC45 Oct 20, 2016 MedGen:C4310738,OMIM:617063 Meier-gorlin syndrome 7 germline 22 19507454 ACAGCCTGTGCAACACCAGCTATACCGCAGCCAGGTTCAAGCTGTGGTCTGTGCATGGACA 119485090 20072 NM_022041.3(GAN):c.601C>T (p.Arg201Ter) GAN Apr 23, 2002 MedGen:C1850386,OMIM:256850,Orphanet:ORPHA643,SNOMED CT:128207002 Giant axonal neuropathy germline 16 81354723 AATGAAAGATATGTCTTTGAAGCAGTAATTCGATGGATAGCACATGATACAGAAATAAGAA 201348482 39369 NM_012388.3(BLOC1S6):c.232C>T (p.Gln78Ter) BLOC1S6 Jun 13, 2017 MedGen:C3280026,OMIM:614171,Orphanet:ORPHA280663 Hermansky-Pudlak syndrome 9 germline 15 45603107 TTGGCTGTGTGTTTTTGTTTCAGACAGAACCAAGTTGTATTGTTAGACACACTGGAACAAG 281864982 47643 NM_024312.4(GNPTAB):c.1759C>T (p.Arg587Ter) GNPTAB May 10, 2012 MedGen:C2673377,OMIM:252500,Orphanet:ORPHA576 I cell disease not provided 12 101765158 GAAGGTGCCTATAGTGACAATCCAATAATTCGACATGCTTCTATTGCCAACAAGTGGAAAA 121908906 21416 NM_003664.4(AP3B1):c.1525C>T (p.Arg509Ter) AP3B1 Oct 11, 2012 MedGen:C1842362,OMIM:608233,Orphanet:ORPHA183678 Hermansky Pudlak syndrome 2 germline 5 78141268 ATTCTTTGGCTAATTGGAGAAAACTGTGAACGAGTTCCTAAAATTGCCCCTGATGTTTTGA 794728873 196906 NM_198056.2(SCN5A):c.3553C>T (p.Gln1185Ter) SCN5A Apr 19, 2012 MedGen:CN517202 not provided germline 3 38575410 CGCTGTCCCTGCTGTGCGGTGGACACCACACAGGCCCCAGGGAAGGTCTGGTGGCGGTTGC 72558426 103174 NM_000531.5(OTC):c.659C>T (p.Pro220Leu) OTC - MedGen:CN517202 not provided unknown X 38403736 AATTCGGAATGCACCTTCAGGCAGCTACTCCAAAGGTAGGGAAACTTTTTGCCTTGAAACT 886041126 264224 NM_004722.3(AP4M1):c.1321C>T (p.Arg441Ter) AP4M1 Sep 13, 2017 MedGen:CN517202 not provided germline 7 100106841 TGCGGCAATGCCAACCCCCACAAGTGGGTGCGACACCTAAGCCACAGCGACGCCTATGTCA 80358262 34307 NM_006432.3(NPC2):c.133C>T (p.Gln45Ter) NPC2 Jul 22, 2008 MedGen:C1843366,OMIM:607625 Niemann-Pick disease type C2 not provided 14 74486386 AAGGAAGTGAATGTGAGCCCATGCCCCACCCAACCCTGCCAGCTGAGCAAAGGACAGTCTT 199472888 78057 NM_000238.3(KCNH2):c.1001C>T (p.Pro334Leu) KCNH2 Jul 15, 2014 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MedGen:CN517202 Congenital long QT syndrome;not provided germline 7 150957418 TCGTGCGCTACCGCACCATTAGCAAGATTCCCCAAATCACCCTCAACTTTGTGGACCTCAA 104894797 26321 NM_004006.2(DMD):c.9568C>T (p.Arg3190Ter) DMD Nov 08, 2017 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009;MedGen:C3668940,OMIM:302045;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Becker muscular dystrophy;Dilated cardiomyopathy 3B;Duchenne muscular dystrophy germline;maternal X 31206663 TTTTCTGCTTTGATTCTTCATAATAGGGGACGAACAGGGAGGATCCGTGTCCTGTCTTTTA 121908354 19967 NM_022124.5(CDH23):c.719C>T (p.Pro240Leu) CDH23 Jul 01, 2017 MedGen:C1832394,OMIM:601386 Deafness, autosomal recessive 12 germline 10 71570884 AGGACATGGACCCCATCTTCATCAACCTGCCTTACAGCACCAACATCTACGAGCATTCTCC 1064793721 407387 NM_006766.4(KAT6A):c.931C>T (p.Arg311Ter) KAT6A Jun 08, 2015 MedGen:CN517202 not provided germline 8 41978754 TTTATAGGCATGTGGATATGTCAAATATGTCGACCTAGGAAAAAAGGACGAAAACTTCTAC 796053089 201628 NM_001165963.1(SCN1A):c.314C>T (p.Thr105Ile) SCN1A Jan 07, 2015 MedGen:CN517202 not provided germline 2 166058639 AAGGGAAGGCCATCTTCCGGTTCAGTGCCACCTCTGCCCTGTACATTTTAACTCCCTTCAA 28941768 19056 NM_006657.2(FTCD):c.403C>T (p.Arg135Cys) FTCD Jul 01, 2003 MedGen:C0268609,OMIM:229100,Orphanet:ORPHA51208,SNOMED CT:59761008 GLUTAMATE FORMIMINOTRANSFERASE DEFICIENCY germline 21 46151945 CTGTACGGCGAGGCAGCCAGGATGGACAGTCGCCGGACCCTGCCGGCCATCCGGGCCGGGG 137852795 15446 NM_001165974.1(UROC1):c.1528C>T (p.Arg510Cys) UROC1 Jun 01, 2009 Human Phenotype Ontology:HP:0012237,MedGen:C0268514,OMIM:276880,Orphanet:ORPHA210128,SNOMED CT:60952007 Urocanate hydratase deficiency germline 3 126498141 GACATATTCTCCCAGGGATTTGGGCCTTTCCGCTGGGTGTGCACATCGGGGGACCCCCAGG 377767361 36192 NM_005359.5(SMAD4):c.1342C>T (p.Gln448Ter) SMAD4 Dec 04, 2012 MedGen:C0345893,OMIM:174900,Orphanet:ORPHA329971,SNOMED CT:9273005 Juvenile polyposis syndrome not provided 18 51076671 TTTGATTTGCGTCAGTGTCATCGACAGATGCAGCAGCAGGCGGCTACTGCACAAGCTGCAG 199473527 78217 NM_000238.3(KCNH2):c.1894C>T (p.Pro632Ser) KCNH2 Jul 23, 2014 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MedGen:CN517202 Congenital long QT syndrome;not provided germline 7 150951499 CTCACCAGTGTGGGCTTCGGCAACGTCTCTCCCAACACCAACTCAGAGAAGATCTTCTCCA 1060500717 404472 NM_001456.3(FLNA):c.6700C>T (p.Arg2234Ter) FLNA Jun 25, 2016 MedGen:C1848213,OMIM:300049,OMIM:300537,SNOMED CT:448227009 Periventricular nodular heterotopia 1 germline X 154352226 CCCCTAGGGGAAGGGGGAGCCCACAAGGTCCGAGCTGGGGGCCCTGGCCTGGAGAGAGCTG 143600903 359150 NM_153461.3(IL17RC):c.1132C>T (p.Arg378Ter) IL17RC Jul 06, 2015 MedGen:C4225324,OMIM:616445 Candidiasis, familial, 9 germline 3 9928346 CACCAGAACCTCTGGCAAGCCGCCCGACTGCAACTGCTGACCCTGCAGAGCTGGCTGCTGG 1057524191 377427 NM_001199107.1(TBC1D24):c.121C>T (p.Gln41Ter) TBC1D24 Dec 21, 2016 MedGen:CN517202 not provided germline 16 2496269 GAACTGCAGGAACTGAAGCAGCTGGCGCGCCAGGGCTACTGGGCCCAAAGCCACGCCCTGC 139643362 213894 NM_000166.5(GJB1):c.490C>T (p.Arg164Trp) GJB1 Jul 29, 2016 MedGen:C0393808,OMIM:302800,Orphanet:ORPHA101075,SNOMED CT:230552007;MedGen:CN517202 X-linked hereditary motor and sensory neuropathy;not provided germline X 71224197 TATCTGCTCTACCCTGGCTATGCCATGGTGCGGCTGGTCAAGTGCGACGTCTACCCCTGCC 72547562 186957 NM_000382.2(ALDH3A2):c.551C>T (p.Thr184Met) ALDH3A2 Apr 15, 2015 MedGen:C0037231,OMIM:270200,Orphanet:ORPHA816,SNOMED CT:111303009;MedGen:CN517202 Sjögren-Larsson syndrome;not provided germline;unknown 17 19656445 TGAAGCAGCGATTTGACCACATTTTCTATACGGGAAACACTGCGGTTGGCAAAATTGTCAT 137853160 23303 NM_000445.4(PLEC):c.913C>T (p.Gln305Ter) PLEC Feb 01, 2005 MedGen:C2677349,OMIM:612138,Orphanet:ORPHA158684 Epidermolysis bullosa simplex with pyloric atresia germline 8 143934923 ACAGCCGCCCGTGCCTGCCCGCAGGAGCTGCAGCTGCGCTGGCAGGAGTACCGGGAGCTGG 993687029 424942 NM_017613.3(DONSON):c.1282C>T (p.Gln428Ter) DONSON Aug 05, 2017 MedGen:CN373593,OMIM:617604 MICROCEPHALY, SHORT STATURE, AND LIMB ABNORMALITIES germline 21 33581370 TCTAAGAGTTTAGTTGCTACCTCAGGTCCACAGGCAGGACTTCCTCCAACCCTCTTGTCCC -1 449085 NM_021007.2(SCN2A):c.1342C>T (p.Gln448Ter) SCN2A Jun 03, 2017 MedGen:C1843140,OMIM:607745,Orphanet:ORPHA140927;MedGen:C3150987,OMIM:613721 Benign familial neonatal-infantile seizures;Early infantile epileptic encephalopathy 11 germline 2 165314067 GAGGCTGAACAGAAGGAAGCTGAATTTCAGCAGATGCTCGAACAGTTGAAAAAGCAACAAG 797045019 205042 NM_001081550.1(THOC2):c.937C>T (p.Leu313Phe) THOC2 Aug 06, 2015 MedGen:C0796218,OMIM:300957,Orphanet:ORPHA457240 Mental retardation, X-linked 12 germline X 123668239 ATTGCGGAAGCTAAGCAAATTGTTAGAAAGCTTACGATGGTTGTGTTGTCTTCTGAAAAAA 28931605 31981 NM_006891.3(CRYGD):c.70C>T (p.Pro24Ser) CRYGD Sep 01, 2007 Human Phenotype Ontology:HP:0010926,MedGen:C1861832,OMIM:115700 Cataract 4 germline 2 208124294 GGCCGCCACTATGAATGCAGCAGCGACCACCCCAACCTGCAGCCCTACTTGAGCCGCTGCA -1 433220 NM_000296.3(PKD1):c.2152C>T (p.Gln718Ter) PKD1 Mar 25, 2017 MedGen:CN169374 not specified germline 16 2114871 CTCATGCTCCCTGGTGACCTCGTTGGCTTGCAGCACGACGCTGGCCCTGGCGCCCTCCTGC 104894206 22328 NM_001814.5(CTSC):c.628C>T (p.Arg210Ter) CTSC Dec 01, 1999 MedGen:C0030360,OMIM:245000,Orphanet:ORPHA678,SNOMED CT:40158001 Papillon-Lefèvre syndrome germline 11 88309176 GATATGATTAGGAGAAGTGGTGGCCACAGTCGAAAAATCCCAAGGTAATCAAGCACACATT 104894246 24196 NM_153767.3(KCNJ1):c.584C>T (p.Ala195Val) KCNJ1 Jun 01, 1998 MedGen:C1855849,OMIM:241200 Bartter syndrome, type 2, antenatal germline 11 128839660 GAGGGAAGCTTTGCCTCCTAATCCGAGTGGCTAATCTCAGGAAGAGCCTTCTTATTGGCAG 515726212 136384 NM_000119.2(EPB42):c.949C>T (p.Arg317Cys) EPB42 Mar 13, 2014 MedGen:C2675192,OMIM:612690 Spherocytosis type 5 germline 15 43208749 ACAGTGCTGCGATGCCTGGGAATCCCTGCCCGCGTGGTGACCACGTTTGCCTCAGCACAGG 727502820 172194 NM_172362.2(KCNH1):c.1546C>T (p.Leu516Phe) KCNH1 Mar 09, 2015 MedGen:C2678486,OMIM:611816,Orphanet:ORPHA420561 Temple-Baraitser syndrome germline 1 210804083 TATGCCAACACCAACAGATACCATGAGATGCTCAACAGTGTTCGGGACTTCCTGAAGCTCT 1057519281 361778 NM_014727.2(KMT2B):c.2428C>T (p.Gln810Ter) KMT2B Jan 12, 2017 MedGen:C4310633,OMIM:617284 Dystonia 28, childhood-onset germline 19 35721775 AAAGTGCAGCTATTCAAGATCGATCAGCAGCAGCAGCAGAAGGTGGCAGCTTCCATGCCGG 80358245 19753 NM_015166.3(MLC1):c.278C>T (p.Ser93Leu) MLC1 Oct 14, 2015 MedGen:C1858854,OMIM:604004,Orphanet:ORPHA2478 Megalencephalic leukoencephalopathy with subcortical cysts 1 germline;unknown 22 50080387 GGATTCCGGTTTCATTCCAGTGCATCCCCTCGGCAATTGTGAGCTTCACCGTCTCCAGGAG 121909674 31248 NM_198903.2(GABRG2):c.1312C>T (p.Gln438Ter) GABRG2 Mar 01, 2006 MedGen:C1858674 Generalized epilepsy with febrile seizures plus 3 germline 5 162153132 ATTGATATCCGCCCAAGATCAGCAACCATTCAAATGAATAATGCTACACACCTTCAAGAGA 61297109 77195 NM_000424.3(KRT5):c.991C>T (p.Arg331Cys) KRT5 Apr 09, 2016 MedGen:C0080333,OMIM:131800,Orphanet:ORPHA79400;MedGen:CN517202 Epidermolysis bullosa simplex, Cockayne-Touraine type;not provided germline 12 52517691 ACCTCAGTGGTCCTCTCCATGGACAACAACCGCAACCTGGACCTGGATAGCATCATCGCTG 57499803 426821 NM_001171.5(ABCC6):c.3978C>T (p.Asp1326=) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16154936 GGAGGCAGCTGAGGGTGGGATCTGGATCGACGGGGTCCCCATTGCCCACGTGGGGCTGCAC 886037874 247767 NM_013417.3(IARS):c.1310C>T (p.Pro437Leu) IARS Aug 31, 2016 MedGen:C4310720,OMIM:617093 Growth retardation, intellectual developmental disorder, hypotonia, and hepatopathy germline 9 92268295 TGGTTATGTGATCTGTTTATTGCAGGGTCCCAGAGTTGGTACGAGAAAAACGATTTGGAAA 28936702 22730 NM_003865.2(HESX1):c.478C>T (p.Arg160Cys) HESX1 Jun 01, 1998 Human Phenotype Ontology:HP:0100842,MedGen:C0338503,OMIM:182230,Orphanet:ORPHA3157,SNOMED CT:7611002 Septo-optic dysplasia sequence germline 3 57198277 CCTTAACTTTAGATTTGGTTTCAAAATCGGCGTGCAAAACTGAAAAGGTCCCATAGAGAAT 869320682 205358 NM_003588.3(CUL4B):c.149C>T (p.Pro50Leu) CUL4B Jan 01, 2015 Gene:114890,MedGen:C1845861,OMIM:300354,Orphanet:ORPHA85293 Syndromic X-linked mental retardation, Cabezas type germline X 120560544 CTGCCACTGATGGTAATACCAGCACCACTCCGCCCACCTCTGCCAAGAAGAGAAAGTTAAA -1 463113 NM_003482.3(KMT2D):c.11755C>T (p.Gln3919Ter) KMT2D Jul 09, 2016 MedGen:C0796004,Orphanet:ORPHA2322,SNOMED CT:313426007 Kabuki syndrome germline 12 49032950 CAACAGCAACTTCAGCAGCAGCAGCAGCAGCAGCTACAACAGCAACAGCAACTTCAGCAGC 137852758 23832 NM_198129.2(LAMA3):c.8962C>T (p.Gln2988Ter) LAMA3 Jan 01, 2002 MedGen:C0268374,OMIM:226650,Orphanet:ORPHA89840,SNOMED CT:33662006 Adult junctional epidermolysis bullosa germline 18 23939322 CCCAAGACCCAGGCCAATCATGGAGCCCTCCAGTTTGGGGACATTCCCACCAGCCACTTGC 724160006 172136 NM_001134418.1(P3H2):c.13C>T (p.Gln5Ter) P3H2 Dec 01, 2014 MedGen:C3280346,OMIM:614292 Myopia, high, with cataract and vitreoretinal degeneration germline 3 189995367 GTGGCTAACCCTGAGCACATGGAAATGCAGCAGAACATTGAGAATTACAGGGCGACAGCTG 80357223 69350 NM_007294.3(BRCA1):c.2800C>T (p.Gln934Ter) BRCA1 Jan 05, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline 17 43092731 AATATCACTGCAGGCTTTCCTGTGGTTGGTCAGAAAGATAAGCCAGTTGATAATGCCAAAT 267607490 77299 NM_001927.3(DES):c.1360C>T (p.Arg454Trp) DES Jul 27, 2017 MedGen:C1858154,OMIM:604765;MedGen:C1832370,OMIM:601419,Orphanet:ORPHA98909;EFO:EFO_0000407,Human Phenotype Ontology:HP:0001644,MedGen:C0007193,Orphanet:ORPHA217604,SNOMED CT:195021004;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Dilated cardiomyopathy 1I;Myofibrillar myopathy 1;Primary dilated cardiomyopathy;Primary familial hypertrophic cardiomyopathy;not provided germline;inherited 2 219425734 AAGACGGTGATGATCAAGACCATCGAGACACGGGATGGGGAGGTAAGTGGTCTGTCTGGGC 750385844 248911 NM_000059.3(BRCA2):c.523C>T (p.Gln175Ter) BRCA2 Sep 08, 2016 MedGen:C2675520,OMIM:612555 Breast-ovarian cancer, familial 2 germline 13 32326505 ATAAACTATTTTCTTTCCTCCCAGGGTCGTCAGACACCAAAACATATTTCTGAAAGTCTAG 727503512 228285 NM_001001430.2(TNNT2):c.517C>T (p.Arg173Trp) TNNT2 Jun 27, 2017 MedGen:C1832243,OMIM:601494;EFO:EFO_0000407,Human Phenotype Ontology:HP:0001644,MedGen:C0007193,Orphanet:ORPHA217604,SNOMED CT:195021004;MedGen:CN517202 Left ventricular noncompaction 6;Primary dilated cardiomyopathy;not provided germline 1 201363349 GAGAACAGGAGGAAGGCTGAGGATGAGGCCCGGAAGAAGAAGGCTTTGTCCAACATGATGC 773148506 213674 NM_002017.4(FLI1):c.970C>T (p.Arg324Trp) FLI1 Apr 25, 2017 MedGen:CN233138;MedGen:CN242283,OMIM:617443 Bleeding disorder platelet type macrothrombocytopenia;Bleeding disorder, platelet-type, 21 germline;inherited 11 128810599 CCCGATGAGGTGGCCAGGCGCTGGGGCGAGCGGAAAAGCAAGCCCAACATGAATTACGACA 121908321 19635 NM_020041.2(SLC2A9):c.1138C>T (p.Arg380Trp) SLC2A9 Aug 25, 2014 MedGen:C2677549,OMIM:612076 Renal hypouricemia 2 germline 4 9890687 GACTAGGGTTTGGTCATTGAGCACCTGGGACGGAGACCCCTCCTCATTGGTGGCTTTGGGC 60399023 29651 NM_000526.4(KRT14):c.373C>T (p.Arg125Cys) KRT14 Mar 30, 2017 MedGen:C0079295,OMIM:131760,Orphanet:ORPHA79396;MedGen:CN517202 Epidermolysis bullosa herpetiformis, Dowling-Meara;not provided germline 17 41586462 GAGAAGGTGACCATGCAGAACCTCAATGACCGCCTGGCCTCCTACCTGGACAAGGTGCGTG 2856585 426912 NM_001171.5(ABCC6):c.2835C>T (p.Pro945=) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16169806 CCTGGCCTACCTGCGTGCCGTGGGCACCCCCCTCTGCCTCTACGCACTCTTCCTCTTCCTC 111033568 26922 NM_002769.4(PRSS1):c.364C>T (p.Arg122Cys) PRSS1 Mar 29, 2017 MedGen:C0238339,OMIM:167800,Orphanet:ORPHA676,SNOMED CT:68072000;MedGen:CN169374 Hereditary pancreatitis;not specified germline 7 142751937 AAGCTCTCCTCACGTGCAGTAATCAACGCCCGCGTGTCCACCATCTCTCTGCCCACCGCCC 587784350 169766 NM_003560.3(PLA2G6):c.2233C>T (p.Arg745Trp) PLA2G6 Feb 08, 2013 Human Phenotype Ontology:HP:0012675,MedGen:C4021076 Iron accumulation in brain germline 22 38112547 TGCACGGATCCAGACGGGCGGGCTGTGGACCGGGCACGGGCCTGGTGCGAGATGGTCGGCA 121965014 15286 NM_000398.6(CYB5R3):c.229C>T (p.Gln77Ter) CYB5R3 Jan 01, 2000 MedGen:C2749560 Methemoglobinemia type 2 germline 22 42630986 CCCAGAGTGACCCCGTTCTGTCCTGCAGGCCAGCACATCTACCTCTCGGCTCGAATTGATG 761957186 485691 NM_006996.2(SLC19A2):c.428C>T (p.Ser143Phe) SLC19A2 Sep 03, 2013 MedGen:C0342287,OMIM:249270,Orphanet:ORPHA49827,SNOMED CT:237617006 Megaloblastic anemia, thiamine-responsive, with diabetes mellitus and sensorineural deafness germline 1 169477534 TCGCCACAGCCACTGAAATTGCCTATTACTCTTATATCTACAGTGTGGTGGACCTGGGCAT 121434294 18557 NM_005957.4(MTHFR):c.547C>T (p.Arg183Ter) MTHFR Jun 01, 1994 MedGen:CN068661 Homocystinuria due to MTHFR deficiency germline 1 11800251 AACTACGCAGTGGACCTGGTGAAGCACATCCGAAGTGAGTTTGGTGACTACTTTGACATCT 368007918 264139 NM_000094.3(COL7A1):c.1573C>T (p.Arg525Ter) COL7A1 Aug 05, 2016 MedGen:CN517202 not provided germline 3 48591527 CAAGCCACCGAGCTGCCCGGGCAGCGGGTGCGAGTGTCCTGGAGCCCAGTCCCTGGTGCCA 755553133 216925 NM_001286209.1(GAS8):c.925C>T (p.Arg309Ter) GAS8 Oct 01, 2015 MedGen:C4225230,OMIM:616726 Ciliary dyskinesia, primary, 33 germline 16 90037837 CTGCAGTGGGAGCATGAAGTGTTAGAGCAGCGATTCACCAAGGTGAGTGGCACCACGCTGG 118192118 76900 NM_000540.2(RYR1):c.1280C>T (p.Ser427Leu) RYR1 May 11, 2010 MedGen:C0751951,OMIM:117000,Orphanet:ORPHA597,SNOMED CT:43152001;MedGen:CN517202 Central core disease;not provided unknown 19 38452854 TGGACAGCTTCAGCGGGAAGCCACGGGGCTCGGGGCCACCCGCTGGCACGGCGCTGCCCAT 879255606 245209 NM_015340.3(LARS2):c.1289C>T (p.Ala430Val) LARS2 Jul 21, 2016 MedGen:C4310761,OMIM:617021 Hydrops, lactic acidosis, and sideroblastic anemia germline 3 45491566 AGGATGCTTTTCTAGCCCTGACTCAGAAAGCCCGGGGGAAGAGAGTGGGTGGAGACGTGAC 1049618423 482259 NM_000084.4(CLCN5):c.82C>T (p.Arg28Ter) CLCN5 Oct 12, 2017 MedGen:CN517202 not provided germline X 50070007 AATACAATTGATTGGGTGAGAGAGAAGTCTCGAGACCGGGATAGGCACCGAGAGGTAAGAC 869320658 227111 NM_000206.2(IL2RG):c.670C>T (p.Arg224Trp) IL2RG Apr 14, 2016 MedGen:C1279481,OMIM:300400,SNOMED CT:203592006;MedGen:CN517202 X-linked severe combined immunodeficiency;not provided germline X 71109315 GATGGGCAGAAACGCTACACGTTTCGTGTTCGGAGCCGCTTTAACCCACTCTGTGGAAGTG 587777132 106525 NM_020919.3(ALS2):c.2761C>T (p.Arg921Ter) ALS2 Feb 21, 2014 MedGen:C1846588,OMIM:607225;MedGen:CN517202 Infantile-onset ascending hereditary spastic paralysis;not provided germline 2 201728592 GAGCGTCGACTGCTGTGTGAGAGTAGTAACCGAGCCCTGTCTCTGCAGCATGCTGGGAGGT 154774635 39558 NM_017882.2(CLN6):c.139C>T (p.Leu47Phe) CLN6 May 13, 2011 MedGen:C0022797,OMIM:204300,SNOMED CT:62009002;MedGen:CN517202 Adult neuronal ceroid lipofuscinosis;not provided germline 15 68218595 GCTGCCCGCACGGCTCCCTTCCACCTCGACCTCTGGTTCTACTTCACACTGCAGAACTGGG -1 428569 NM_020732.3(ARID1B):c.3430C>T (p.Gln1144Ter) ARID1B Nov 16, 2015 MedGen:C3281201,OMIM:614562 Mental retardation, autosomal dominant 12 germline 6 157184315 TCAAGCAGTGCAGCGAGCTCCCTGAAAAAGCAGTATATTCAGTACCTGTTTGCCTTTGAGT 886041983 264013 NM_031844.2(HNRNPU):c.520C>T (p.Gln174Ter) HNRNPU Sep 09, 2016 MedGen:CN517202 not provided germline 1 244863788 CAACCGCCGGCGACGCAGCAGCAACAGCCCCAACAGCAGCGCGGGGCCGCCAAGGAGGCCG 587783446 168618 NM_017780.3(CHD7):c.5458C>T (p.Arg1820Ter) CHD7 Oct 31, 2017 MedGen:C0265354,OMIM:214800,Orphanet:ORPHA138,SNOMED CT:47535005;MedGen:CN517202 CHARGE association;not provided germline 8 60850546 CGAGCTGACCCCGCGCTGTGCTTTCTGGAACGAGTCGGTATGCCTGATGCCAAGGCCATAG 387906609 38598 NM_001849.3(COL6A2):c.1096C>T (p.Arg366Ter) COL6A2 Feb 18, 2016 na;MedGen:CN029274,OMIM:158810;MedGen:CN517202 BETHLEM MYOPATHY 1, AUTOSOMAL RECESSIVE;Bethlem myopathy 1;not provided germline 21 46117916 TACCCGGGGGAAGCAGGGAGTCCAGGGGAGCGAGGAGACCAAGGCGGCAAGGTAAGTGGCC 794728813 196505 NM_001035.2(RYR2):c.184C>T (p.Leu62Phe) RYR2 Aug 15, 2011 MedGen:CN517202 not provided germline 1 237330893 CCTCTTTCTGTGCAGAATGTGCCCCCAGACCTCTCCATCTGCACCTTTGTGCTGGAGCAGT 185790394 181384 NM_001453.2(FOXC1):c.-244C>T FOXC1 - MedGen:CN517202 not provided inherited 6 1610202 TCCTGCAAGGCGGTCTGCCGCGGCCGGGCCCGGCCTTCTCCCCTCGCAGCGACCCCGCCTC 724159975 172106 NM_020461.3(TUBGCP6):c.2215C>T (p.Arg739Ter) TUBGCP6 Jan 12, 2015 MedGen:C1855056,OMIM:251270 Microcephaly with chorioretinopathy, autosomal recessive germline 22 50224196 GATGATGACTTCAGCTACGCCCGTGAACTCCGAGACAGGGAGAGAAGGCTGAAGTCCCTGG 397517012 54216 NM_004572.3(PKP2):c.1912C>T (p.Gln638Ter) PKP2 Aug 18, 2017 MedGen:C0349788,Orphanet:ORPHA247,SNOMED CT:253528005,SNOMED CT:281170005;MedGen:C1836906,OMIM:609040;MedGen:CN517202 Arrhythmogenic right ventricular cardiomyopathy;Arrhythmogenic right ventricular cardiomyopathy, type 9;not provided germline 12 32822526 CAGAATATCTATATTCAAAACCGGAATATCCAGACTGACAACAACAAAAGTATTGGATGTT 80357352 69958 NM_007294.3(BRCA1):c.4810C>T (p.Gln1604Ter) BRCA1 Sep 08, 2016 MedGen:C2676676,OMIM:604370;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 1;Hereditary cancer-predisposing syndrome;not provided germline 17 43071104 CCATCTTCAACCTCTGCATTGAAAGTTCCCCAATTGAAAGTTGCAGAATCTGCCCAGAGTC 121434248 18381 NM_000348.3(SRD5A2):c.679C>T (p.Arg227Ter) SRD5A2 Jun 29, 2017 MedGen:C0268297,OMIM:264600,Orphanet:ORPHA753,SNOMED CT:57514000 3-Oxo-5 alpha-steroid delta 4-dehydrogenase deficiency germline 2 31529326 GCATTTTTCTCACTTTGTTTCCTTGGGCTGCGAGCTTTTCACCACCATAGGTAAATTTTTC 28942107 18011 NM_000271.4(NPC1):c.3104C>T (p.Ala1035Val) NPC1 Sep 28, 2016 MedGen:C3179455,OMIM:257220 Niemann-Pick disease type C1 germline;unknown 18 23536814 TCCTCCTTGGCCATGGCACCAGGGTCGGAGCCACGTACTTCATGACCTACCACACCGTGCT 886042331 266411 NM_001256850.1(TTN):c.77113C>T (p.Gln25705Ter) TTN Feb 28, 2017 MedGen:C1858763,OMIM:604145;MedGen:C1838244,OMIM:600334,Orphanet:ORPHA609;MedGen:C1861065,OMIM:613765;MedGen:C1863599,OMIM:603689,Orphanet:ORPHA178464;MedGen:C1837342,OMIM:608807,Orphanet:ORPHA140922;MedGen:C2673677,OMIM:611705,Orphanet:ORPHA289377;MedGen:CN517202 Dilated cardiomyopathy 1G;Distal myopathy Markesbery-Griggs type;Familial hypertrophic cardiomyopathy 9;Hereditary myopathy with early respiratory failure;Limb-girdle muscular dystrophy, type 2J;Myopathy, early-onset, with fatal cardiomyopathy;not provided germline 2 178564096 GTCAAAGACTGTATACGGACTGATGGAGGACAATATATTCTGAAACTCAGCAATGTTGGTG 886042495 267078 NM_004006.2(DMD):c.10477C>T (p.Gln3493Ter) DMD Aug 18, 2015 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Becker muscular dystrophy;Duchenne muscular dystrophy germline X 31169519 TCCCCCCTGAGCCAGCCTCGTAGTCCTGCCCAGATCTTGATTTCCTTAGAGAGTGAGGAAA 746164064 237625 NM_001039213.3(CEACAM16):c.703C>T (p.Arg235Cys) CEACAM16 Feb 16, 2016 MedGen:CN043648,Orphanet:ORPHA87884 Nonsyndromic hearing loss and deafness germline 19 44705631 CGTGTGGCCATCCTCCAGGATTCCACCACCCGCACAGGCTGCACCATCAAAGTTGACTTCA 1064796853 410400 NM_001083962.1(TCF4):c.652C>T (p.Gln218Ter) TCF4 Mar 13, 2017 MedGen:CN517202 not provided germline 18 55279554 ACCAGCACTTTCCCTAGCTCCTTCTTCATGCAAGGTAAGATGCTGCTGCTTCTGAGGGAAA 121434615 26377 NM_003588.3(CUL4B):c.1714C>T (p.Arg572Cys) CUL4B Feb 01, 2007 Gene:114890,MedGen:C1845861,OMIM:300354,Orphanet:ORPHA85293 Syndromic X-linked mental retardation, Cabezas type germline X 120539349 ATTTTAGCTAAGTATGTAGATTCAAAACTTCGTGCAGGCAACAAAGAAGCTACAGATGAAG 772381373 359550 NM_000094.3(COL7A1):c.6781C>T (p.Arg2261Ter) COL7A1 Sep 27, 2016 MedGen:CN517202 not provided germline 3 48572912 GGGGAGACAGGGAAGCCGGGAGCCCCAGGTCGAGATGGTGCCAGTGGAAAAGATGGAGACA 80357305 69822 NM_007294.3(BRCA1):c.4258C>T (p.Gln1420Ter) BRCA1 Nov 01, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145;MedGen:CN517202 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome;not provided germline 17 43082503 GAAATGGCTGAACTAGAAGCTGTGTTAGAACAGCATGGGAGCCAGCCTTCTAACAGCTACC 121918639 27890 NM_003126.3(SPTA1):c.145C>T (p.Leu49Phe) SPTA1 Aug 01, 1990 MedGen:C1851741,OMIM:130600 Elliptocytosis 2 germline 1 158685227 AAGGAGCGGGTCGCTGAGAGGGGTCAGAAGCTTGAGGATTCCTATCACTTACAAGTTTTCA 1028534806 404661 NM_001696.3(ATP6V1E1):c.634C>T (p.Arg212Trp) ATP6V1E1 Dec 11, 2017 MedGen:CN241832,OMIM:617402 CUTIS LAXA, AUTOSOMAL RECESSIVE, TYPE IIC germline;inherited 22 17592721 ACTTTCTCTCCACAGATGATGCCAGAAGTCCGGGGAGCCTTGTTTGGTGCAAATGCCAACA 281865026 46972 NM_024312.4(GNPTAB):c.1196C>T (p.Ser399Phe) GNPTAB May 10, 2012 MedGen:C0033788,OMIM:252600,Orphanet:ORPHA423461,SNOMED CT:65764006 Pseudo-Hurler polydystrophy not provided 12 101770109 AAAGTCACATTCATCGCATCGAAGGGCTGTCCCAGAAGTTTATTTACCTAAATGATGATGT 386134163 51329 NM_002739.4(PRKCG):c.356C>T (p.Ser119Phe) PRKCG Apr 18, 2013 MedGen:C1854369,OMIM:605361,Orphanet:ORPHA98763 Spinocerebellar ataxia 14 not provided 19 53889708 GCAGCCCCACCTTCTGCGACCACTGTGGCTCCCTCCTCTACGGGCTTGTGCACCAGGGCAT 312262796 49687 NM_024408.3(NOTCH2):c.5857C>T (p.Arg1953Cys) NOTCH2 Feb 28, 2013 MedGen:C1857761,OMIM:610205,Orphanet:ORPHA261629 Alagille syndrome 2 not provided 1 119918478 GATGGTACTACACCCCTGATCCTGGCTGCCCGCCTGGCTGTGGAGGGAATGGTGGCAGAAC 137853086 22831 NM_004482.3(GALNT3):c.484C>T (p.Arg162Ter) GALNT3 Apr 01, 2005 MedGen:C1876187,OMIM:211900,OMIM:610233,Orphanet:ORPHA306661 Tumoral calcinosis, familial, hyperphosphatemic germline 2 165770217 GCTTTCGCAAGTGACAGGATTTCTTTGCACCGAGATCTTGGACCAGACACTCGACCTCCTG 730881731 180359 NM_000136.2(FANCC):c.319C>T (p.Gln107Ter) FANCC Jul 02, 2016 MedGen:C0015625,Orphanet:ORPHA84,SNOMED CT:30575002;MedGen:CN517202 Fanconi anemia;not provided germline 9 95240675 CTAATTAACAAAGAACCACAGAATTCTGGACAATCAAAACTTAACTCCTGGATACAGGTAA 121964949 27072 NM_000892.4(KLKB1):c.337C>T (p.Arg113Ter) KLKB1 Oct 01, 2004 MedGen:C0272339,OMIM:612423,Orphanet:ORPHA749,SNOMED CT:48976006 Prekallikrein deficiency germline 4 186236789 TCTATGTATTTTTCTTGTACAGCTTGCCATCGAGACATTTATAAAGGAGTTGATATGAGAG 121912810 32587 NM_000083.2(CLCN1):c.566C>T (p.Ser189Phe) CLCN1 May 01, 2009 MedGen:C2936781,OMIM:160800,SNOMED CT:57938005 Congenital myotonia, autosomal dominant form germline 7 143321718 CTGCACATAATCTTTCAACGCTTTTAGGCTCTGGAATCCCCGAAATGAAGACAATACTTCG 116840770 46890 NM_000168.5(GLI3):c.3481C>T (p.Gln1161Ter) GLI3 Sep 13, 2012 MedGen:C0265220,OMIM:146510,Orphanet:ORPHA672,SNOMED CT:56677004 Pallister-Hall syndrome not provided 7 41965592 CCCGAGGGCAGCAAAACCGACCTGCCCATTCAGTGGAACGAAGTCAGCTCCGGAAGCGCCG 763801533 222413 NM_177438.2(DICER1):c.559C>T (p.Arg187Ter) DICER1 Oct 20, 2015 MedGen:CN072455,OMIM:601200 DICER1-related pleuropulmonary blastoma cancer predisposition syndrome germline 14 95130072 TGTCATCTTGCAATCCTAGACCACCCCTATCGAGAAATTATGAAGGTAAGTTTTAGACCTA 193922921 39290 NM_007317.2(KIF22):c.443C>T (p.Pro148Leu) KIF22 Aug 18, 2017 MedGen:C1863732,OMIM:603546,Orphanet:ORPHA93360;MedGen:CN517202 Spondyloepimetaphyseal dysplasia with multiple dislocations;not provided germline 16 29798641 TGGGCAGCCCAGAGCAACCTGGGGTGATCCCGCGGGCTCTCATGGACCTCCTGCAGCTCAC 868197660 247455 NM_001042413.1(GLIS3):c.1681C>T (p.His561Tyr) GLIS3 Aug 12, 2016 MedGen:C1857775,OMIM:610199,Orphanet:ORPHA79118 Diabetes mellitus, neonatal, with congenital hypothyroidism germline 9 4117797 CGCTATAAACTGCTGATCCACATGAGAGTCCACTCTGGGGAGAAGCCCAACAAGTGTACGG 199474685 79573 NM_000448.2(RAG1):c.1331C>T (p.Ala444Val) RAG1 Mar 02, 2017 MedGen:C1832322,OMIM:601457,Orphanet:ORPHA331206;MedGen:CN517202 Severe immunodeficiency, autosomal recessive, T-cell negative, B-cell negative, NK cell-positive;not provided germline 11 36574635 GCATGACCTTGTTCCTGCTGGCTCTGAGGGCGAGGAATGAGCACAGGCAAGCTGATGAGCT 104894580 23962 NM_000891.2(KCNJ2):c.199C>T (p.Arg67Trp) KCNJ2 Jan 04, 2017 MedGen:C1563715,OMIM:170390,Orphanet:ORPHA37553,SNOMED CT:422348008;MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MedGen:CN517202 Andersen Tawil syndrome;Congenital long QT syndrome;not provided germline 17 70175238 CAGTTCATCAATGTGGGTGAGAAGGGGCAACGGTACCTCGCAGACATCTTCACCACGTGTG 137852363 25157 NM_000132.3(F8):c.5878C>T (p.Arg1960Ter) F8 Nov 27, 1986 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154904026 GGCTTAGTAATGGCTCAGGATCAAAGGATTCGATGGTATCTGCTCAGCATGGGCAGCAATG 121913304 28129 NM_000321.2(RB1):c.1666C>T (p.Arg556Ter) RB1 May 13, 2016 MedGen:C0027672,SNOMED CT:699346009;MeSH:D009369,MedGen:C0027651,SNOMED CT:108369006;Human Phenotype Ontology:HP:0009919,MeSH:D012175,MedGen:C0035335,OMIM:180200,Orphanet:ORPHA790;MedGen:CN069793 Hereditary cancer-predisposing syndrome;Neoplasm;Retinoblastoma;Retinoblastoma, trilateral germline;somatic 13 48381414 ATGATAAAACATTTAGAACGATGTGAACATCGAATCATGGAATCCCTTGCATGGCTCTCAG 761796175 405672 NM_004369.3(COL6A3):c.2506C>T (p.Arg836Ter) COL6A3 Jul 28, 2015 MedGen:CN517202 not provided germline 2 237377336 TCCTAATCTACCTTCATTGCAGAGAGCAAGCGAGACATTCTGTTCCTCTTTGACGGCTCAG 886041884 264528 NM_001170629.1(CHD8):c.3733C>T (p.Arg1245Ter) CHD8 Jul 08, 2016 MedGen:CN517202 not provided germline 14 21402485 ATTTTAAACCAGGCCCAGGCACGATGTCATCGAATTGGGCAGAGCAAAGCTGTGAAGGTGT 1131691550 421358 NM_020989.3(CRYGC):c.427C>T (p.Gln143Ter) CRYGC Mar 29, 2016 MedGen:CN517202 not provided germline 2 208128301 CTCTACGAGCTGCCCAACTACCGGGGGCGGCAATACCTGCTGAGGCCCCAAGAGTACAGGC 121909762 21837 NM_032119.3(ADGRV1):c.6901C>T (p.Gln2301Ter) ADGRV1 Jun 14, 2016 MedGen:CN033130,OMIM:500004,SNOMED CT:57838006;MeSH:D052245,MedGen:C0271097,Orphanet:ORPHA886;MedGen:C1854237,OMIM:605472 Retinitis pigmentosa-deafness syndrome;Usher syndrome;Usher syndrome, type 2C germline;unknown 5 90690991 AATGTGACCTTTGCCCCTGGGGAAACCATTCAAACCTTGTTGTTAGAGGTCCTGGCTGACG 367643250 136541 NM_004714.2(DYRK1B):c.304C>T (p.Arg102Cys) DYRK1B May 15, 2014 MedGen:C4014361,OMIM:615812 Abdominal obesity-metabolic syndrome 3 germline 19 39830443 TATGATGACGACAACCATGACTACATCGTGCGCAGTGGCGAGCGCTGGCTGGAGCGCTACG 886044836 269178 NM_201383.2(PLEC):c.4267C>T (p.Gln1423Ter) PLEC Dec 08, 2015 MedGen:C2931072,OMIM:226670,Orphanet:ORPHA257 Epidermolysa bullosa simplex and limb girdle muscular dystrophy germline 8 143925674 GTGGACGCGCAGCAGCAGAAGCGCAGCATTCAGGAGGAGCTGCAGCAGCTGCGGCAGAGCT 267607235 16044 NM_152778.2(MFSD8):c.1235C>T (p.Pro412Leu) MFSD8 Oct 01, 2009 MedGen:C1838571,OMIM:610951,Orphanet:ORPHA228366 Ceroid lipofuscinosis neuronal 7 germline 4 127921639 CGATTGAACAAGCCTGGTGCCTCTACACCCCGGTGATTCATCTGGCCCAGTTCCTTACATC 121908131 19465 NM_175073.2(APTX):c.617C>T (p.Pro206Leu) APTX Oct 01, 2001 MedGen:C1859598,OMIM:208920,Orphanet:ORPHA1168 Adult onset ataxia with oculomotor apraxia germline 9 32984784 CAAAGGCCCGTTACCATTGGCTGGTCTTACCGTGGACCTCCATTTCCAGTCTGAAGGCTGT 3218714 29141 NM_000257.3(MYH7):c.1207C>T (p.Arg403Trp) MYH7 Jul 12, 2017 MedGen:C0546264,OMIM:255310,Orphanet:ORPHA2020,SNOMED CT:240084007;MedGen:C1834481,OMIM:613426;MedGen:C3495498,OMIM:192600;MedGen:C3495498,OMIM:192600;Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569;MedGen:CN074249,OMIM:160500,Orphanet:ORPHA59135;Gene:619511,MedGen:C1850709,OMIM:255160;MedGen:C1842160,OMIM:608358,SNOMED CT:699267007;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;Gene:8090,MedGen:CN074265,OMIM:181430,Orphanet:ORPHA437572;MedGen:CN517202 Congenital myopathy with fiber type disproportion;Dilated cardiomyopathy 1S;Familial hypertrophic cardiomyopathy 1;Familial hypertrophic cardiomyopathy 1;Hypertrophic cardiomyopathy;Myopathy, distal, 1;Myopathy, myosin storage, autosomal recessive;Myosin storage myopathy;Primary familial hypertrophic cardiomyopathy;Scapuloperoneal myopathy, MYH7-related;not provided germline;unknown 14 23429279 GCCGACCTGCTCAAGGGGCTGTGCCACCCTCGGGTGAAAGTGGGCAATGAGTACGTCACCA 104894142 16835 NM_000102.3(CYP17A1):c.1084C>T (p.Arg362Cys) CYP17A1 Jan 01, 2004 MedGen:CN042980 Complete combined 17-alpha-hydroxylase/17,20-lyase deficiency germline 10 102832566 CTGCTGGAGGCCACCATCCGAGAGGTGCTTCGCCTCAGGCCCGTGGCCCCTATGCTCATCC 111033826 36545 NM_000155.3(GALT):c.553C>T (p.Pro185Ser) GALT Dec 04, 2012 MedGen:C0268151,OMIM:230400,Orphanet:ORPHA79239,SNOMED CT:124354006 Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase not provided 9 34648160 GGTGCCATGATGGGCTGTTCTAACCCCCACCCCCACTGCCAGGTAAGGGTGTCAGGGGCTC 745517517 270173 NM_001128227.2(GNE):c.268C>T (p.Arg90Ter) GNE Jul 11, 2017 MedGen:C1833373,OMIM:600737 Inclusion body myopathy 2 germline 9 36246472 TTATTTCTCCCCGGCTTTAGAAATACATATCGAATGATTGAACAAGATGACTTTGACATTA 387907239 44236 NM_002144.3(HOXB1):c.619C>T (p.Arg207Cys) HOXB1 Jul 13, 2012 MedGen:C3553625,OMIM:614744 Hereditary congenital facial paresis 3 germline 17 48529834 GAGCCAGGCCTGGGCTCGCCCAGTGGCCTCCGCACCAACTTCACCACAAGGCAGCTGACAG 121918478 28343 NM_000506.3(F2):c.1381C>T (p.Arg461Trp) F2 Jun 01, 2009 MedGen:C0272317,SNOMED CT:33297000 Hereditary factor II deficiency disease germline 11 46728746 CCCAGGTACAACTGGCGGGAGAACCTGGACCGGGACATTGCCCTGATGAAGCTGAAGAAGC 369483167 143189 NM_016122.2(CEP83):c.625C>T (p.Arg209Ter) CEP83 Jun 05, 2014 MedGen:C3890591,OMIM:615862 Nephronophthisis 18 germline 12 94378967 CTTAATGTTGATCTCACAAAAGACAGCAAACGAGTGGAACAACTTGCTCGAGAAAAAGTCT 104893677 33106 NM_031850.3(AGTR1):c.950C>T (p.Thr317Met) AGTR1 Sep 01, 2005 Human Phenotype Ontology:HP:0008660,MedGen:C0266313,OMIM:267430,SNOMED CT:204949001 Renal dysplasia germline 3 148741880 GTGACTGTAGAATTGCAGATATTGTGGACACGGCCATGCCTATCACCATTTGTATAGCTTA 121908363 19865 NM_000441.1(SLC26A4):c.2162C>T (p.Thr721Met) SLC26A4 Jul 01, 2017 Human Phenotype Ontology:HP:0011387,MedGen:C1863752,OMIM:600791;Human Phenotype Ontology:HP:0011387,MedGen:C1863752,OMIM:600791;MedGen:C0271829,OMIM:274600,Orphanet:ORPHA705,SNOMED CT:70348004;MedGen:C0271829,OMIM:274600,Orphanet:ORPHA705,SNOMED CT:70348004 Enlarged vestibular aqueduct;Enlarged vestibular aqueduct;Pendred's syndrome;Pendred's syndrome germline;unknown 7 107710126 ACAACATTAGAAAGGACACATTCTTTTTGACGGTCCATGATGCTATACTCTATCTACAGAA 202074612 432123 NM_000444.5(PHEX):c.142C>T (p.Gln48Ter) PHEX Oct 31, 2013 MedGen:C0733682,OMIM:307800,Orphanet:ORPHA89936,SNOMED CT:82236004 Familial X-linked hypophosphatemic vitamin D refractory rickets germline;maternal X 22038492 TTTTCAGTGAGTCAAGGTCTCTTAAGTCTCCAAGCTAAACAGGAGTACTGCCTGAAGCCAG 1135401814 424657 NM_006077.3(MICU1):c.1048C>T (p.Gln350Ter) MICU1 Jan 06, 2017 MedGen:C3810285,OMIM:615673,Orphanet:ORPHA401768 Myopathy with extrapyramidal signs maternal 10 72423263 CAGTCCAAGAAGCTGACCGCCATGCAGAGGCAGCTCAAGAAGCACTTCAAAGAAGGAAAGG 267606856 15235 NM_001080476.2(GRXCR1):c.412C>T (p.Arg138Cys) GRXCR1 Feb 12, 2010 MedGen:C1414017,OMIM:613285 Deafness, autosomal recessive 25 germline 4 42962919 CAGCAACCATCAACTGATCTAGAATTTGACCGTGTAGTGATTTATACCACCTGCCTTCGTG 121908602 21168 NM_012082.3(ZFPM2):c.334C>T (p.Arg112Ter) ZFPM2 Jul 01, 2005 MedGen:C1857781,OMIM:610187 Diaphragmatic hernia 3 germline 8 105561395 GAGCTGGAGGTGTTTCAGAAAGATGGGGAACGAAAAATTCAGAGTCGACAGCAACTTCCAG 104894324 20161 NM_020661.3(AICDA):c.70C>T (p.Arg24Trp) AICDA Sep 01, 2000 MedGen:C1720956,OMIM:605258,Orphanet:ORPHA101089 Immunodeficiency with hyper IgM type 2 germline 12 8606951 CAATTCAAAAATGTCCGCTGGGCTAAGGGTCGGCGTGAGACCTACCTGTGCTACGTAGTGA 61732609 15287 NM_000398.6(CYB5R3):c.478C>T (p.Arg160Ter) CYB5R3 May 26, 2017 MedGen:C2749560;MedGen:CN517202 Methemoglobinemia type 2;not provided germline 22 42627674 CCTTCTCTCTCCCCAGGGAAGTTCGCCATCCGACCTGACAAAAAGTCCAACCCTATCATCA 1057517833 359937 NM_000192.3(TBX5):c.670C>T (p.Gln224Ter) TBX5 Nov 02, 2016 MedGen:CN517202 not provided germline 12 114385561 GTTCTCTCTTCCTCTTTCCTTCAGATCACGCAATTAAAGATTGAGAATAATCCCTTTGCCA 748090019 247749 NM_016004.4(IFT52):c.424C>T (p.Arg142Ter) IFT52 Aug 30, 2016 MedGen:C4310718,OMIM:617102 Short-rib thoracic dysplasia 16 with or without polydactyly germline 20 43605012 TTTAATTTTTCTTCTTCAAGGGAAATTAGCCGAGCTGCAGGAAAGGCTGTGCCTGGGATCA 587777111 106503 NM_004366.5(CLCN2):c.1499C>T (p.Ala500Val) CLCN2 Sep 09, 2015 MedGen:C3810242,OMIM:615651,Orphanet:ORPHA363540 Leukoencephalopathy with ataxia germline 3 184354556 GCACCTACCGGATTGTGCCTGGGGGCTACGCTGTGGTCGGTGAGTGCCTCAGGTCCCATCG 778884343 482157 NM_207346.2(TSEN54):c.1117C>T (p.Gln373Ter) TSEN54 Aug 04, 2017 MedGen:CN517202 not provided germline 17 75522198 CAGGAAGATGTCAACGCCGATCCCGAGGTGCAGCGGTGCTCCAGCTGGCGGGAGTACAAGG 372949456 370420 NM_017890.4(VPS13B):c.2788C>T (p.Gln930Ter) VPS13B Jan 09, 2017 MedGen:CN517202 not provided germline 8 99275218 TTAGCTCCAGATTTGATGGCCTTCACAATCCAAGTTCCACAATATATTGACTACTGCCACA 587784422 170161 NM_006306.3(SMC1A):c.586C>T (p.Arg196Cys) SMC1A Sep 05, 2015 MedGen:C1802395,OMIM:300590,SNOMED CT:55016009 Congenital muscular hypertrophy-cerebral syndrome de novo;germline X 53413261 TACCATCGCAAGAAAAATATTGCGGCTGAACGCAAGGAAGCAAAGCAGGAGAAAGAAGAGG 104895549 16632 NM_001127255.1(NLRP7):c.1951C>T (p.Pro651Ser) NLRP7 Aug 01, 2009 MedGen:C2931618,OMIM:231090,Orphanet:ORPHA254685 Hydatidiform mole germline 19 54938222 TTCTCCTGCAGGTGCACTTACCTAACCATTCCGAACTGGGCTCGGCAGGATCTTCGCTCTC 267607003 15307 NM_001134363.2(RBM20):c.1913C>T (p.Pro638Leu) RBM20 Nov 17, 2016 MedGen:C2750995,OMIM:613172;MedGen:C1834481,OMIM:613426;EFO:EFO_0000407,Human Phenotype Ontology:HP:0001644,MedGen:C0007193,Orphanet:ORPHA217604,SNOMED CT:195021004;MedGen:CN517202 Dilated cardiomyopathy 1DD;Dilated cardiomyopathy 1S;Primary dilated cardiomyopathy;not provided germline;inherited 10 110812310 ATGGCCCAGAAAGGCCGCGGTCTCGTAGTCCGGTGAGCCGGTCACTCTCCCCGAGGTCCCA 377656387 40286 NM_004453.3(ETFDH):c.1448C>T (p.Pro483Leu) ETFDH Aug 01, 2007 MedGen:C4016438 Glutaric acidemia iic, late-onset germline 4 158706351 TCTTTTACTGGATATTGAGAGGAATGGAGCCGTGGACTCTGAAACATAAAGGTAATTCAAA 773844428 194658 NM_000260.3(MYO7A):c.5968C>T (p.Gln1990Ter) MYO7A Jan 20, 2015 MedGen:C1568247,OMIM:276900,Orphanet:ORPHA231169 Usher syndrome, type 1 germline 11 77208720 GCTGCAGGAATTGTGCCCTCACTCACCTACCAGGTGTTCTTCATGAAGAAGCTGTGGACCA 779869631 264310 NM_020632.2(ATP6V0A4):c.334C>T (p.Gln112Ter) ATP6V0A4 Jul 06, 2016 MedGen:CN517202 not provided germline 7 138762983 AAACTGGAAGGAGAGTTACAGGAAGCCAACCAGAACCAGCAGGCCTTGAAACAAAGCTTCC 786204910 187323 NM_000314.6(PTEN):c.49C>T (p.Gln17Ter) PTEN Jul 30, 2015 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1959582,OMIM:601728,Orphanet:ORPHA306498 Hereditary cancer-predisposing syndrome;PTEN hamartoma tumor syndrome germline 10 87864518 GAGATCGTTAGCAGAAACAAAAGGAGATATCAAGAGGATGGATTCGACTTAGACTTGACCT 398122524 94575 NM_001271684.1(SLC35A3):c.514C>T (p.Gln172Ter) SLC35A3 Dec 05, 2013 MedGen:C3809910,OMIM:615553,Orphanet:ORPHA370943 Arthrogryposis, mental retardation, and seizures germline 1 100011413 CTTGATTCTAAGGAACTTTCAGCTGGTTCTCAATTTGTAGGACTCATGGCAGTTCTCACAG 730881388 180433 NM_000051.3(ATM):c.3049C>T (p.Gln1017Ter) ATM May 15, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Ataxia-telangiectasia syndrome;Hereditary cancer-predisposing syndrome;not provided germline 11 108271378 GACTCTGAGAACACAAGGGATGCTCAAGGACAGTTTCTTACAGTAATTGGAGCATTTTGGT 9378251 27192 NM_000500.7(CYP21A2):c.92C>T (p.Pro31Leu) CYP21A2 Jul 28, 2017 MedGen:C0852654,OMIM:201910 21-hydroxylase deficiency germline;unknown 6 32038514 ACTGGTGGAAGCTCCGGAGCCTCCACCTCCCGCCTCTTGCCCCGGGCTTCTTGCACCTGCT 1057519522 362313 NM_001005463.2(EBF3):c.616C>T (p.Arg206Ter) EBF3 Jul 11, 2017 MedGen:C4310618,OMIM:617330;na;MedGen:CN517202 Hypotonia, ataxia, and delayed development syndrome;Neurodevelopmental disorder;not provided de novo;germline 10 129877788 CAGAACTGTTTGAAGAATGCAGGCAACCCTCGAGATATGCGGAGATTCCAGGTATACATTT 180177110 152117 NM_024675.3(PALB2):c.2257C>T (p.Arg753Ter) PALB2 Jun 30, 2017 MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Familial cancer of breast;Hereditary cancer-predisposing syndrome;not provided germline;unknown 16 23629897 TATGAAAAAGCATCTACAGAAGTTGCTGGACGAACTTGCTGCACACCCCAACTTGCTCATT 72558494 102995 NM_000531.5(OTC):c.1042C>T (p.Gln348Ter) OTC - MedGen:CN517202 not provided unknown X 38421059 ATGGTGTCCCTGCTGACAGATTACTCACCTCAGCTCCAGAAGCCTAAATTTTGATGTTGTG 137854594 25971 NM_000397.3(CYBB):c.301C>T (p.His101Tyr) CYBB Oct 01, 1998 MedGen:C1844378;MedGen:CN517202 Granulomatous disease, chronic, X-linked, variant;not provided germline X 37792023 CGAAGACAACTGGACAGGAATCTCACCTTTCATAAAATGGTGGCATGGATGATTGCACTTC 80356680 29580 NM_000228.2(LAMB3):c.124C>T (p.Arg42Ter) LAMB3 Sep 16, 2016 MedGen:C0079683,OMIM:226700,Orphanet:ORPHA79404,SNOMED CT:400140006;MedGen:CN517202 Junctional epidermolysis bullosa gravis of Herlitz;not provided germline;unknown 1 209650023 GACCTGCTTGTTGGGAGGACCCGGTTTCTCCGAGCTTCATCTACCTGTGGACTGACCAAGC 376682593 442115 NM_000435.2(NOTCH3):c.3040C>T (p.Arg1014Cys) NOTCH3 Feb 10, 2017 MedGen:CN517202 not provided germline 19 15180783 TGCAGCCGCCAGCCTTGTCAAAACGGGGGTCGCTGCGTCCAGACTGGGGCCTATTGCCTTT 886037860 247638 NM_001193464.1(DYNC2LI1):c.662C>T (p.Thr221Ile) DYNC2LI1 Aug 25, 2016 MedGen:C4310724,OMIM:617088 Short-rib thoracic dysplasia 15 with polydactyly germline 2 43800845 AATTTGTTCTCCTGATTTGTTTAAAGTTTACCAGTAAATCAGAAGCTCTATTACTAAAAAT 745814294 223312 NM_018297.3(NGLY1):c.930C>T (p.Gly310=) NGLY1 Jan 07, 2016 MedGen:C3808991,OMIM:615273,Orphanet:ORPHA404454 Congenital disorder of deglycosylation inherited 3 25737407 ACTTTTGGAAACAAGATGTGGACGGTGTGGCGAGTGGGCCAATTGTTTTACACTGTGCTGC 777849257 234014 NM_000051.3(ATM):c.2023C>T (p.Gln675Ter) ATM Nov 01, 2016 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Ataxia-telangiectasia syndrome;Hereditary cancer-predisposing syndrome;not provided germline;unknown 11 108253938 ATTGTGAGAGAATGTGGTATAGAAAAGCACCAGTCCAGTATTGGCTTCTCTGTCCACCAGA 137853243 29981 NM_000545.6(HNF1A):c.335C>T (p.Pro112Leu) HNF1A Dec 07, 2016 MedGen:C1838100,OMIM:600496;MedGen:CN517202 Maturity-onset diabetes of the young, type 3;not provided germline 12 120988841 TCCCGTCCTTGCCCTCTCCCAGGGAGGACCCGTGGCGTGTGGCGAAGATGGTCAAGTCCTA 267607027 19108 NM_015474.3(SAMHD1):c.490C>T (p.Arg164Ter) SAMHD1 Apr 01, 2010 MedGen:C2749659,OMIM:612952 Aicardi Goutieres syndrome 5 germline 20 36935048 TACTATGTTTTTCCAGGAGCTTCACACAATCGATTTGAGCATAGTCTAGGGTAAGAAGGGA 587784267 169353 NM_000430.3(PAFAH1B1):c.430C>T (p.Arg144Ter) PAFAH1B1 Feb 22, 2016 MedGen:C1843916,OMIM:607432;MedGen:CN517202 Lissencephaly 1;not provided germline 17 2670193 GTGTGGGATTATGAGACTGGAGATTTTGAACGAACTCTTAAAGGACATACAGACTCTGTAC 373804633 132702 NM_002894.2(RBBP8):c.298C>T (p.Arg100Trp) RBBP8 Feb 01, 2014 MedGen:C1847572,OMIM:606744 Seckel syndrome 2 germline 18 22968855 GATCGCTGTGCAGTAACTGAAGAACATATGCGGAAAAAACAGCAAGAGTTTGAAAATATCC 118204083 16545 NM_000298.5(PKLR):c.487C>T (p.Arg163Cys) PKLR May 01, 1991 MedGen:C1849472,OMIM:266200 Pyruvate kinase deficiency of red cells germline 1 155295457 ATCGCCCTGGACACCAAGGGACCGGAGATCCGCACTGGGATCCTGCAGGGGGTGAGCAGTG 128626238 26281 NM_000109.3(DMD):c.700C>T (p.Gln234Ter) DMD Mar 01, 1994 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Duchenne muscular dystrophy germline X 32699219 ATCACATCACTCTTCCAAGTTTTGCCTCAACAAGTGAGCATTGAAGCCATCCAGGAAGTGG 104894976 24791 NM_003140.2(SRY):c.397C>T (p.Arg133Trp) SRY May 01, 1997 MedGen:C2748896,OMIM:400044 46,XY sex reversal, type 1 germline Y 2787207 AAATACCCGAATTATAAGTATCGACCTCGTCGGAAGGCGAAGATGCTGCCGAAGAATTGCA 761821795 268881 NM_024301.4(FKRP):c.313C>T (p.Gln105Ter) FKRP Nov 18, 2015 MedGen:C1846672,OMIM:607155,Orphanet:ORPHA34515 Limb-girdle muscular dystrophy-dystroglycanopathy, type C5 germline 19 46755763 CGCATCCCCAACGTGCGTCTGGCGCTGCTCCAGCCCGCCCTGGACCGGCCAGCCGCAGCCT 587781196 165751 NM_130838.1(UBE3A):c.1201C>T (p.Arg401Ter) UBE3A Feb 14, 2014 MedGen:C0162635,OMIM:105830,Orphanet:ORPHA72,SNOMED CT:76880004 Angelman syndrome germline 15 25370913 GGAGAAGAAAGAAGAAACAAGAAAGGTCCTCGAGTGGACCCCCTGGAAACTGAACTTGGTG 794727298 192495 NM_017780.3(CHD7):c.1465C>T (p.Gln489Ter) CHD7 Jan 26, 2016 MedGen:C0265354,OMIM:214800,Orphanet:ORPHA138,SNOMED CT:47535005;MedGen:CN517202 CHARGE association;not provided germline 8 60742897 GGTTGTCCTGGTGTTGGCCTTGGAGACCCACAAGCAATCCAGGAACGACTGATACCTGGCC 80356693 33890 NM_000083.2(CLCN1):c.1412C>T (p.Ser471Phe) CLCN1 Apr 12, 2011 MedGen:C0027127,Orphanet:ORPHA206973 Myotonia congenita not provided 7 143339263 AACGCTTCTTTCTACTCCAGTTCTGGATGTCCATCGTGGCCACCACTATGCCCATACCCTG 121434384 17241 NM_018668.4(VPS33B):c.1312C>T (p.Arg438Ter) VPS33B Dec 01, 2007 MedGen:C1859722,OMIM:208085,Orphanet:ORPHA2697 Arthrogryposis renal dysfunction cholestasis syndrome germline 15 91002143 CCTGAGCACCTGCTAACCTTCTCCAATCTGCGAAGAGCTGGGCTCCTAACGGAGCAGGCCC 397509390 59804 NM_201647.3(STAMBP):c.1270C>T (p.Arg424Ter) STAMBP Oct 19, 2015 MedGen:C3280296,OMIM:614261,Orphanet:ORPHA294016 Microcephaly-capillary malformation syndrome germline 2 73862254 GTGGACAGAGCAGTGACCATCACAGACCTTCGATGAGCGTTTGAGTCCAACACCTTCCAAG 397516317 52452 NM_000260.3(MYO7A):c.5392C>T (p.Gln1798Ter) MYO7A May 17, 2016 MedGen:C1568247,OMIM:276900,Orphanet:ORPHA231169;MedGen:CN517202 Usher syndrome, type 1;not provided germline 11 77204141 AGGACACGCTCCGTCAACGAGCTCACCGACCAGATCTTTGAGGGTCCCCTGAAAGCCGAGC 104894654 23345 NM_001390.4(DTNA):c.362C>T (p.Pro121Leu) DTNA Mar 06, 2001 MedGen:C1858725,OMIM:604169 Left ventricular noncompaction 1 germline 18 34794250 TCCTTAACTTCCTGCTTGCAGCGTTTGATCCGTAAGCACCCTCTGAATGTCTGTTCCTCTC 1057519342 362092 NM_014855.2(AP5Z1):c.1732C>T (p.Gln578Ter) AP5Z1 Jan 26, 2017 MedGen:C3150901,OMIM:613647,Orphanet:ORPHA306511 Spastic paraplegia 48, autosomal recessive germline 7 4789856 CCCCAGGTGGCTGACGGGTCCCTGATCAACCAGCTGGCGCTGCTGCTCCTGGGCAGGAGCG 74315496 18329 NM_000268.3(NF2):c.784C>T (p.Arg262Ter) NF2 Aug 01, 1994 MedGen:C0027832,OMIM:101000,Orphanet:ORPHA637,SNOMED CT:92503002 Neurofibromatosis, type 2 germline 22 29661313 CCCAAGATCTCCTTCCCGTGGAATGAAATCCGAAACATCTCGTACAGTGACAAGGAGGTAG 104894655 20564 NM_003673.3(TCAP):c.157C>T (p.Gln53Ter) TCAP Oct 09, 2009 MedGen:C1843791,OMIM:607487;MedGen:C1866008,OMIM:601954,Orphanet:ORPHA34514;EFO:EFO_0000407,Human Phenotype Ontology:HP:0001644,MedGen:C0007193,Orphanet:ORPHA217604,SNOMED CT:195021004 Dilated cardiomyopathy 1N;Limb-girdle muscular dystrophy, type 2G;Primary dilated cardiomyopathy germline 17 39665762 GAGGACACCCAGAGACATGAGACCTACCACCAGCAGGGGCAGTGCCAGGTGCTGGTGCAGC 121913646 29152 NM_000257.3(MYH7):c.1925C>T (p.Ser642Leu) MYH7 Oct 18, 2002 MedGen:C1834481,OMIM:613426 Dilated cardiomyopathy 1S germline 14 23427271 AGAAGGGCAAAGGCAAGGCCAAGAAAGGCTCGTCCTTTCAGACTGTGTCAGCTCTGCACAG 113994126 16134 NM_000642.2(AGL):c.16C>T (p.Gln6Ter) AGL Mar 11, 2016 MedGen:C1968740;MedGen:C0017922,OMIM:232400,Orphanet:ORPHA308684,SNOMED CT:66937008 Glycogen storage disease IIIb;Glycogen storage disease type III germline;unknown 1 99851058 CCTCTAGAAGCCAAAATGGGACACAGTAAACAGATTCGAATTTTACTTCTGAACGAAATGG 375278294 239337 NM_001080522.2(CC2D2A):c.3652C>T (p.Arg1218Ter) CC2D2A Nov 21, 2015 Human Phenotype Ontology:HP:0002335,MedGen:C0431399,Orphanet:ORPHA475,SNOMED CT:253175003,SNOMED CT:716997004 Joubert syndrome germline 4 15574207 CCCCCAGTTCTTCTGGGCTACAGTAAGGAGCGAAATATGATTCTTGAGCGGGGTTTTGATT 387906836 39217 NM_003322.5(TULP1):c.1198C>T (p.Arg400Trp) TULP1 Apr 01, 2004 MedGen:C3151206,OMIM:613843 Leber congenital amaurosis 15 germline 6 35503763 CGTGGGTACAGCACTAATGTGGCAAGCCTTCGGCAGGAGCTGGCAGCTGTGATCTATGTGA -1 482024 NM_003482.3(KMT2D):c.12667C>T (p.Gln4223Ter) KMT2D Jan 09, 2018 MedGen:CN517202 not provided germline 12 49032038 CACTTAAGTCCTCAGCAGCAGCAGCAGCTACAGGCACTCCTCATGCAGCGGCAGCTGCAGC 587777492 143202 NM_021072.3(HCN1):c.299C>T (p.Ser100Phe) HCN1 Jun 01, 2014 MedGen:C4014531,OMIM:615871 Epileptic encephalopathy, early infantile, 24 germline 5 45695795 AGTACGGCTTCATGCAGAGGCAGTTCACCTCCATGCTGCAGCCCGGGGTCAACAAATTCTC 750868279 361952 NM_001282225.1(ADA2):c.740C>T (p.Ala247Val) ADA2 Jan 13, 2017 MedGen:C0004943,OMIM:109650,Orphanet:ORPHA117,SNOMED CT:310701003 Behcet's syndrome germline 22 17203576 AGGACAACGTGCTCTACATGGAGATCAGAGCCAGGCTGCTGCCGGTGAGCCCAGCTCTCCT 104893819 27558 NM_003242.5(TGFBR2):c.1483C>T (p.Arg495Ter) TGFBR2 May 27, 2017 MedGen:C2697932,Orphanet:ORPHA60030,SNOMED CT:446263001;MedGen:C2674876,OMIM:610168;MedGen:CN118826,Orphanet:ORPHA91387;MedGen:CN517202 Loeys-Dietz syndrome;Loeys-Dietz syndrome 2;Thoracic aortic aneurysm and aortic dissection;not provided germline 3 30688470 GAAAGCATGAAGGACAACGTGTTGAGAGATCGAGGGCGACCAGAAATTCCCAGCTTCTGGC 587777177 106800 NM_006767.3(LZTR1):c.365C>T (p.Ser122Leu) LZTR1 Mar 04, 2014 MedGen:C3810283,OMIM:615670 Schwannomatosis 2 unknown 22 20987548 GGACCCCACCGGCCCCCCGTTACCACCACTCGGCCGTCGTCTATGGGAGCAGCATGTTTGT 886041169 264283 NM_017780.3(CHD7):c.4189C>T (p.Gln1397Ter) CHD7 Jun 03, 2016 MedGen:CN517202 not provided germline 8 60837671 TAACTATTAATTTCATTTTTCTTCCAGGCTCAGGCTAGATGTCATAGAATAGGACAGAGCA 886039255 259346 NM_001242896.1(DEPDC5):c.856C>T (p.Arg286Ter) DEPDC5 Jul 01, 2016 Gene:50987,MedGen:C1858477,OMIM:604364 Epilepsy, familial focal, with variable foci 1 germline 22 31797688 AAACTCTTCATCCAGTATCCAGTGTTGGTGCGACTGGAACAGGCAGGTACTGCATTCATGT 137852240 25629 NM_000133.3(F9):c.676C>T (p.Arg226Trp) F9 Dec 15, 1989 MedGen:C0008533,OMIM:306900,Orphanet:ORPHA98879,SNOMED CT:41788008 Hereditary factor IX deficiency disease germline X 139551217 CAAAGCACCCAATCATTTAATGACTTCACTCGGGTTGTTGGTGGAGAAGATGCCAAACCAG 137852212 446500 NM_194277.2(FRMD7):c.685C>T (p.Arg229Cys) FRMD7 Aug 11, 2017 MedGen:CN517202 not provided germline X 132084546 AAGATCAATACTTTTAACTGGGCTAAAATCCGCAAGTTGAGTTTTAAGAGAAAGCATTTTC 991227431 482001 NM_002180.2(IGHMBP2):c.1813C>T (p.Arg605Ter) IGHMBP2 Feb 24, 2017 MedGen:CN517202 not provided germline 11 68936293 CGGAGGATCAACGTGGCTGTCACCCGTGCCCGACGCCACGTGGCGGTCATCTGTGACTCCC 137852581 24873 NM_000044.4(AR):c.2623C>T (p.His875Tyr) AR May 25, 1995 Human Phenotype Ontology:HP:0012125,MedGen:C0376358,OMIM:176807,SNOMED CT:399068003 Malignant tumor of prostate germline X 67723701 TATTGTTCCCTACAGATTGCGAGAGAGCTGCATCAGTTCACTTTTGACCTGCTAATCAAGT -1 444578 NM_006624.5(ZMYND11):c.82C>T (p.Gln28Ter) ZMYND11 Sep 19, 2017 MedGen:CN517202 not provided germline 10 180094 CTTTGGGCAGCCATTGAGATTATACGGAACCAGAAGCAGATTGCCAACATTGACCGTATTA 267606846 17119 NM_020435.3(GJC2):c.778C>T (p.Arg260Cys) GJC2 Jun 11, 2010 MedGen:C3150732,OMIM:613480 Lymphedema, hereditary, IC germline 1 228158536 TGCCCGCACGTGGTGGACTGCTTCGTGTCGCGCCCTACTGAAAAGACGGTCTTCCTGCTGG 63750048 23892 NM_000447.2(PSEN2):c.254C>T (p.Ala85Val) PSEN2 Apr 22, 2008 MedGen:C1847200,OMIM:606889;MedGen:CN517202 Alzheimer disease, type 4;not provided germline 1 226883817 TGGAGGAAGAGCTGACCCTCAAATACGGAGCGAAGCACGTGATCATGCTGTTTGTGCCTGT 200075782 39327 NM_003560.3(PLA2G6):c.109C>T (p.Arg37Ter) PLA2G6 Oct 31, 2017 MedGen:C0270724,OMIM:256600,Orphanet:ORPHA35069,SNOMED CT:52713000;Human Phenotype Ontology:HP:0012675,MedGen:C4021076;MedGen:CN517202 Infantile neuroaxonal dystrophy;Iron accumulation in brain;not provided germline 22 38169318 GTGGCTGTGGCCGACTACACCTCGAGTGACCGAGTTCGGGAGGAAGGGCAGCTGATTCTGT 863224971 213890 NM_000166.5(GJB1):c.-103C>T GJB1 Jun 29, 2017 MedGen:CN118851;MedGen:C0393808,OMIM:302800,Orphanet:ORPHA101075,SNOMED CT:230552007 Charcot-Marie-Tooth Neuropathy X;X-linked hereditary motor and sensory neuropathy germline X 71223249 GCACCGGGCGGTGATGAATTGGGACGCAGGCGCGGAGCCCAGGGACCACTCCCCCTGCACA 41286844 32077 NM_000066.3(C8B):c.1282C>T (p.Arg428Ter) C8B Oct 16, 2017 MedGen:C3151080,OMIM:613789;MedGen:CN517202 Complement component 8 deficiency type 2;not provided germline 1 56940965 ACCATGGTGGAGGACTTGGTGGTCCTGGTACGAGGAGGGGCAAGTGAGCACATCACCACCC 1057519317 361900 NM_138393.2(REEP6):c.383C>T (p.Pro128Leu) REEP6 Jan 19, 2017 MedGen:C4310626,OMIM:617304 Retinitis pigmentosa 77 germline 19 1496319 CCTTCCTGTTGTTCTGCATGGCTCCCAGGCCCTGGAACGGGGCTCTCATGCTGTATCAGCG 104894739 25816 NM_003916.4(AP1S2):c.106C>T (p.Gln36Ter) AP1S2 Dec 01, 2006 MedGen:C0796254,OMIM:304340,Orphanet:ORPHA1568 Pettigrew syndrome germline X 15852419 GAGAAGAAAAAGATCACAAGAGAACTTGTTCAGACCGTTTTAGCACGGAAACCTAAAATGT 137852840 17729 NM_015404.3(WHRN):c.307C>T (p.Gln103Ter) WHRN Apr 01, 2007 MedGen:C1568249,OMIM:611383 Usher syndrome, type 2D germline 9 114504495 ATGCTTCGTCTGGTCATCCCGCGCTCCGACCAGCTGCTCTTCGACCAATACACGGCCGAGG 113994154 17162 NM_207346.2(TSEN54):c.1027C>T (p.Gln343Ter) TSEN54 Sep 08, 2009 MedGen:C1856974,OMIM:225753,Orphanet:ORPHA166063 Pontocerebellar hypoplasia type 4 germline 17 75522108 GACGCTGAGTCCTGGTGCCAGAAGCTGAACCAGCGCAAGGAGAAGCTCTCCAGGCGGGAAC 80358844 66668 NM_000059.3(BRCA2):c.6070C>T (p.Gln2024Ter) BRCA2 Sep 08, 2016 MedGen:C2675520,OMIM:612555;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 2;Hereditary cancer-predisposing syndrome germline 13 32340425 GTATTGTTTAAAAGTAACGAACATTCAGACCAGCTCACAAGAGAAGAAAATACTGCTATAC 267607503 77330 NM_002055.4(GFAP):c.1091C>T (p.Ala364Val) GFAP Jan 08, 2015 MedGen:C0270726,OMIM:203450,Orphanet:ORPHA58,SNOMED CT:81854007;MedGen:CN517202 Alexander's disease;not provided germline 17 44911272 ATGTCAAGCTGGCCCTGGACATCGAGATCGCCACCTACAGGAAGCTGCTAGAGGGCGAGGA 118192214 34660 NM_172107.3(KCNQ2):c.967C>T (p.Gln323Ter) KCNQ2 Mar 31, 2016 MedGen:C1852587,OMIM:121200 Benign familial neonatal seizures 1 germline 20 63438681 GGGTCTGGGTTTGCCCTGAAGGTTCAGGAGCAGCACAGGCAGAAGCACTTTGAGAAGAGGC 368505753 68093 NM_000492.3(CFTR):c.200C>T (p.Pro67Leu) CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008;MedGen:C0238339,OMIM:167800,Orphanet:ORPHA676,SNOMED CT:68072000 Cystic fibrosis;Hereditary pancreatitis germline;unknown 7 117509069 GGGATAGAGAGCTGGCTTCAAAGAAAAATCCTAAACTCATTAATGCCCTTCGGCGATGTTT 398124532 102374 NM_144997.5(FLCN):c.1597C>T (p.Gln533Ter) FLCN May 17, 2017 MedGen:CN517202 not provided germline 17 17213798 AAGGTGGACAGTCGACCCAAAGAGGACACACAGAAGCTGCTGAGCATCCTGGGTGCGTCCG 80358928 66918 NM_000059.3(BRCA2):c.7024C>T (p.Gln2342Ter) BRCA2 Mar 16, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome germline 13 32354877 TCTCCCCATTGCAGCACAACTAAGGAACGTCAAGAGATACAGAATCCAAATTTTACCGCAC 375699023 223602 NM_024675.3(PALB2):c.1042C>T (p.Gln348Ter) PALB2 Jul 28, 2016 MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Familial cancer of breast;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline;unknown 16 23635504 CCAGCAAATGAAAACCAAAACTTAAAAGAACAAAATCAAACAGAGAAATCTTTAAAATCTC 121912776 32674 NM_000719.6(CACNA1C):c.116C>T (p.Ala39Val) CACNA1C Apr 10, 2014 MedGen:C1142166,Orphanet:ORPHA130,SNOMED CT:418818005;MedGen:C2678478,OMIM:611875 Brugada syndrome;Brugada syndrome 3 germline 12 2115290 ACATGAATGCCAATGCGGCAGCGGGGCTGGCCCCTGAGCACATCCCCACCCCGGGGGCTGC 199422250 47537 NM_001363.4(DKC1):c.1150C>T (p.Pro384Ser) DKC1 May 10, 2012 MedGen:C1148551,OMIM:305000 Dyskeratosis congenita X-linked not provided X 154773244 GACACTTACCCTCGGAAGTGGGGTTTAGGTCCAAAGGTAAGTGGTACTGGGTTGCGTGCCC 797045143 205535 NM_032737.3(LMNB2):c.469C>T (p.His157Tyr) LMNB2 Aug 15, 2015 MedGen:C4225289,OMIM:616540,Orphanet:ORPHA457265 Epilepsy, progressive myoclonic, 9 germline 19 2438464 GGCCGTGTGAAGGACCTGGAGTCCCTGTTCCACCGGAGCGAGGTGGAGCTGGCAGCTGCCC 121908489 20807 NM_003919.2(SGCE):c.289C>T (p.Arg97Ter) SGCE Nov 17, 2016 MedGen:C1834570,OMIM:159900,Orphanet:ORPHA36899,SNOMED CT:439732004 Myoclonic dystonia germline 7 94628303 TTTAATACAAATTTAATGGGTTACCCAGACCGACCTGGATGGCTTCGATATATCCAAAGGA 199469646 106425 NM_017415.2(KLHL3):c.1723C>T (p.Arg575Trp) KLHL3 - Gene:7830,MedGen:C1449844,OMIM:145260,Orphanet:ORPHA757,SNOMED CT:15689008 Pseudohypoaldosteronism, type 2 germline 5 137625765 ACGCTGCTTCCAACGAACATGAGCACGGGGCGGAGCTATGCAGGTCAGTGTGTGCCATCTC 886037964 248903 NM_006545.4(NPRL2):c.883C>T (p.Arg295Ter) NPRL2 Sep 21, 2016 MedGen:C4310709,OMIM:617116 Epilepsy, familial focal, with variable foci 2 germline 3 50348173 TACTGCAGCCTGAGCCCTGGCACTACCGTGCGAGACCTCATTGGCCGCCACCCCCAGCAGC 1057519360 224597 NM_005957.4(MTHFR):c.416C>T (p.Thr139Met) MTHFR - MedGen:C1856058,OMIM:236250 Homocysteinemia due to MTHFR deficiency germline 1 11801220 CCTGCTGCCGTCAGCGCCTGGAGGAGATCACGGGCCATCTGCACAAAGCTAAGCAGCTGGG 1060502274 397217 NM_000264.4(PTCH1):c.1882C>T (p.Gln628Ter) PTCH1 May 14, 2016 MedGen:C0004779,OMIM:109400,Orphanet:ORPHA377,SNOMED CT:69408002 Gorlin syndrome germline 9 95469119 TGCGTCAGCAGAGTGATTCAGGTTGAACCTCAGGCCTACACCGACACACACGACAATACCC 104893957 23491 NM_001453.2(FOXC1):c.392C>T (p.Ser131Leu) FOXC1 Jun 01, 1998 MedGen:C1866560,OMIM:601631 Anterior segment dysgenesis 3 germline 6 1610837 GCTGGCAGAACAGCATCCGCCACAACCTCTCGCTCAACGAGTGCTTCGTCAAGGTGCCGCG 762552974 421464 NM_001163435.2(TBCK):c.1039C>T (p.Arg347Ter) TBCK May 30, 2017 MedGen:CN517202 not provided germline 4 106244657 GAGAAAGAGCTTGTCAACAAGGAAATCATTCGATCCAAACCACCTATCTGCACACTCCCCA 780718243 422101 NM_005682.6(ADGRG1):c.235C>T (p.Arg79Ter) ADGRG1 Oct 09, 2015 MedGen:CN517202 not provided germline 16 57651370 GCCCCTTTCCCTGCAGCCCACCCTGCTTCCCGATCCTTCCCTGACCCCAGGGGCCTCTACC 765887545 414328 NM_001204.6(BMPR2):c.1750C>T (p.R584*) BMPR2 - MedGen:C0152171,OMIM:178600,SNOMED CT:26174007 Primary pulmonary hypertension germline 2 202555415 AGCACACCTTTGACTATAGGGGAAAAAAACCGAAATTCAATTAACTATGAACGACAGCAAG 1057520533 368264 NM_000060.4(BTD):c.866C>T (p.Ala289Val) BTD Mar 04, 2015 MedGen:CN517202 not provided germline 3 15644722 TGGCAGCAATTGAGATTCAGAAAGCTTTTGCTGTTGCCTTTGGCATCAACGTTCTGGCAGC 143912947 205201 NM_005932.3(MIPEP):c.916C>T (p.Leu306Phe) MIPEP Dec 01, 2016 MedGen:C4310661,OMIM:617228,Orphanet:ORPHA478049 Combined oxidative phosphorylation deficiency 31 germline 13 23869319 GTGGGGTATTCCACGTTTTCTCACAGGGCTCTCCAAGGAACGATAGCTAAAAATCCAGGTA 121434322 16785 NM_005142.2(GIF):c.137C>T (p.Ser46Leu) GIF Mar 15, 2005 MedGen:C1394891,OMIM:261000 Intrinsic factor deficiency germline 11 59843998 TCAATGGAATACAAGTACTCATGGAGAACTCGGTGACTTCATCAGCCTACCCAAACCCCAG 398122928 48492 NM_001142339.2(GNAL):c.61C>T (p.Arg21Ter) GNAL Jan 01, 2013 MedGen:C3554447,OMIM:615073,Orphanet:ORPHA329466 Dystonia 25 germline 18 11752494 ACGGAAGACCAGGGCGTCGATGAAAAAGAACGACGCGAGGCCAACAAAAAGATCGAGAAGC 515726181 136326 NM_015713.4(RRM2B):c.121C>T (p.Arg41Trp) RRM2B Apr 17, 2014 MedGen:CN187502 RRM2B-related mitochondrial disease germline 8 102232232 GAAGAGCCACTCCTAAGAAAGAGTTCTCGCCGGTTTGTCATCTTTCCAATCCAGTACCCTG 1057517744 360306 NM_000458.3(HNF1B):c.541C>T (p.Arg181Ter) HNF1B Aug 24, 2015 MedGen:CN517202 not provided germline 17 37739443 TGGTACGTCAGAAAGCAACGAGAGATCCTCCGACGTAAGTGTTTTCATCCTGCCTCTGCCT 121917740 28161 NM_000537.3(REN):c.1159C>T (p.Arg387Ter) REN Dec 02, 1994 MedGen:C4016362 Hyperproreninemia, familial germline 1 204155078 CCCACCTGGGCCCTGGGGGCCACCTTCATCCGAAAGTTCTACACAGAGTTTGATCGGCGTA 186214592 99665 NM_001110556.1(FLNA):c.4543C>T (p.Arg1515Ter) FLNA Feb 28, 2013 MedGen:C0265251,OMIM:311300,Orphanet:ORPHA90650,SNOMED CT:54036001;MedGen:C1848213,OMIM:300049,OMIM:300537,SNOMED CT:448227009 Oto-palato-digital syndrome, type I;Periventricular nodular heterotopia 1 germline X 154358500 GGCACCCAGACCGTCAATTATGTGCCCAGCCGAGAAGGGCCCTACAGCATCTCAGTACTGT 137853005 20648 NM_006017.2(PROM1):c.1726C>T (p.Gln576Ter) PROM1 Jan 30, 2015 Human Phenotype Ontology:HP:0000556,MedGen:C0854723,Orphanet:ORPHA71862,SNOMED CT:314407005;Human Phenotype Ontology:HP:0000547,MeSH:D012174,MedGen:C0035334,OMIM:268000,Orphanet:ORPHA791,SNOMED CT:28835009;MedGen:C2677516,OMIM:612095 Retinal dystrophy;Retinitis pigmentosa;Retinitis pigmentosa 41 germline;unknown 4 15994028 AATAGAGGCACTTACGGCACTCTTCACCTGCAGAACAGCTTCAATATCAGTGAACATCTCA 398123065 98157 NM_001710.5(CFB):c.766C>T (p.Gln256Ter) CFB Oct 24, 2013 MedGen:C3809950,OMIM:615561 Complement factor B deficiency germline 6 31947950 CCTGAGCCACTCTCCTGGCACCCAGGGGAACAACAGAAGCGGAAGATCGTCCTGGACCCTT 121917766 27356 NM_002253.2(KDR):c.3439C>T (p.Pro1147Ser) KDR Sep 19, 2013 Gene:7909,MedGen:C1865871,OMIM:602089;MedGen:CN169374 Hemangioma, capillary infantile;not specified germline;somatic 4 55088939 CAGACCATGCTGGACTGCTGGCACGGGGAGCCCAGTCAGAGACCCACGTTTTCAGAGTTGG 372691318 65582 NM_005006.6(NDUFS1):c.1669C>T (p.Arg557Ter) NDUFS1 Jul 01, 2010 MedGen:C1838979,OMIM:252010 Mitochondrial complex I deficiency germline 2 206130127 CTCCTGGGAGCAGATGGAGGTTGTATCACACGACAGGATTTGCCAAAGGATTGTTTCATTA 794726759 187730 NM_001165963.1(SCN1A):c.4933C>T (p.Arg1645Ter) SCN1A Dec 20, 2014 MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002 Severe myoclonic epilepsy in infancy paternal 2 165992342 TTCCGAGTGATCCGTCTTGCTAGGATTGGCCGAATCCTACGTCTGATCAAAGGAGCAAAGG -1 451767 NM_015120.4(ALMS1):c.1054C>T (p.Arg352Ter) ALMS1 Apr 28, 2017 MedGen:C0268425,OMIM:203800,Orphanet:ORPHA64,SNOMED CT:63702009 Alstrom syndrome germline 2 73424716 GATCTTTGTTCATATATGTCATGGAAGACACGAAAAGATACACAGTGGCCTGAAAACAATT -1 473772 NM_000038.5(APC):c.22C>T (p.Gln8Ter) APC Aug 09, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 5 112754912 TAGCCAAGGATGGCTGCAGCTTCATATGATCAGTTGTTAAAGCAAGTTGAGGCACTGAAGA 796052407 202545 NM_001909.4(CTSD):c.299C>T (p.Ser100Phe) CTSD Jan 07, 2015 MedGen:CN517202 not provided germline 11 1759569 AGTGCTTCACAGTCGTCTTCGACACGGGCTCCTCCAACCTGTGGGTCCCCTCCATCCACTG 755546887 401422 NM_000135.2(FANCA):c.2851C>T (p.Arg951Trp) FANCA Sep 28, 2016 MedGen:C0015625,Orphanet:ORPHA84,SNOMED CT:30575002 Fanconi anemia germline 16 89761950 CCTGAAGCTGATGCTCTTTCAGATACTGAACGGTAAGTGTTGAAAAGAGCTACCCTGGCCA 121964874 27276 NM_004360.4(CDH1):c.2095C>T (p.Gln699Ter) CDH1 Nov 06, 2012 MedGen:C1708349,OMIM:137215,Orphanet:ORPHA26106 Hereditary diffuse gastric cancer germline 16 68823557 GAAGGGGCCGCTGGCGTCTGTAGGAAGGCACAGCCTGTCGAAGCAGGATTGCAAATTCCTG -1 471953 NM_000044.4(AR):c.2359C>T (p.Arg787Ter) AR Feb 13, 2017 MedGen:C0039585,OMIM:300068,SNOMED CT:12313004 Androgen resistance syndrome germline X 67721873 CACAAGTCCCGGATGTACAGCCAGTGTGTCCGAATGAGGCACCTCTCTCAAGAGTTTGGAT 267606768 31845 NM_001361.4(DHODH):c.730C>T (p.Arg244Trp) DHODH Jan 01, 2010 MedGen:C0265257,OMIM:263750,SNOMED CT:66038001 Miller syndrome germline 16 72022386 CCCTAGGTGCTGCAGGAGAGGGATGGCTTGCGGAGAGTGCACAGGCCGGCAGTCCTGGTGA 1114167283 244003 NM_203474.1(PORCN):c.268C>T (p.Arg90Ter) PORCN Jan 10, 2016 MedGen:C0016395,OMIM:305600,Orphanet:ORPHA2092 Focal dermal hypoplasia de novo X 48511426 CTCCTGTGCTACCTCGTGCTGTTCCTCTGCCGACATTCCTCCCATCGAGGCGTCTTCCTAT 121912522 29429 NM_000233.3(LHCGR):c.1715C>T (p.Ala572Val) LHCGR Apr 01, 1995 MedGen:C0342549,OMIM:176410,Orphanet:ORPHA3000,SNOMED CT:237818003 Gonadotropin-independent familial sexual precocity germline 2 48688082 ATAAAGATACAAAGATTGCTAAGAAAATGGCAATCCTCATCTTCACCGATTTCACCTGCAT 121434440 21881 NM_014236.3(GNPAT):c.631C>T (p.Arg211Cys) GNPAT May 01, 1998 MedGen:C1857242,OMIM:222765,Orphanet:ORPHA309796 Rhizomelic chondrodysplasia punctata type 2 germline 1 231265355 CTACGAATGTCGGGTGCCTTTTTCATGCGGCGTACCTTTGGTGGCAATAAACTCTACTGGG 398124637 102584 NM_000146.3(FTL):c.-164C>T FTL Feb 19, 2013 MedGen:C1833213,OMIM:600886,Orphanet:ORPHA163 Hyperferritinemia cataract syndrome germline 19 48965344 TCGGCGGTCCCGCGGGTCTGTCTCTTGCTTCAACAGTGTTTGGACGGAACAGATCCGGGGA 114202595 28829 NM_006193.2(PAX4):c.361C>T (p.Arg121Trp) PAX4 Dec 01, 2001 Human Phenotype Ontology:HP:0005978,MedGen:C0011860,OMIM:125853,Orphanet:ORPHA181376,SNOMED CT:44054006 Diabetes mellitus type 2 germline 7 127614533 TCCCAGGTCTCCTCCATCAACCGAGTCCTGCGGGCATTACAGGAGGACCAGGGACTACCGT 886041192 265093 NM_000397.3(CYBB):c.271C>T (p.Arg91Ter) CYBB Sep 30, 2016 MedGen:CN517202 not provided germline X 37791993 CTTAATCCAAAGTGCTGCTCAACAAGAGTTCGAAGACAACTGGACAGGAATCTCACCTTTC 267606653 20059 NM_021926.3(ALX4):c.793C>T (p.Arg265Ter) ALX4 Nov 15, 2009 MedGen:C3150703,OMIM:613451,Orphanet:ORPHA228390 Frontonasal dysplasia 2 germline 11 44267607 TTTCGCGTCTTGTAGGTCTGGTTCCAGAACCGAAGGGCCAAGTGGAGGAAGCGGGAGCGTT 587777929 76356 NM_001166284.1(CCT7):c.1313C>T (p.Ser438Leu) CCT7 Sep 15, 2013 MedGen:C1838021,OMIM:608446 Myocardial infarction 1 inherited 2 73252803 CTGTAGATGAAACCATCAAGAACCCCCGCTCGACTGTGGATGCTCCCACAGCAGCAGGCCG 764396564 200654 NM_138413.3(HOGA1):c.134C>T (p.Pro45Leu) HOGA1 Nov 27, 2014 MedGen:C3150878,OMIM:613616,Orphanet:ORPHA93600 Primary hyperoxaluria, type III germline 10 97584837 TTGCGGGTATCTACCCCCCTGTGACCACCCCCTTCACTGCCACTGCAGAGGTGGACTATGG 747719953 273069 NM_213599.2(ANO5):c.1639C>T (p.Arg547Ter) ANO5 Jun 20, 2016 MedGen:C1969785,OMIM:611307,Orphanet:ORPHA206549 Limb-girdle muscular dystrophy, type 2L germline 11 22262137 ACATTTTTTTTTAACTTAACAGAAATTCCTCGAACATACCAGGAGTATGAGAGCAGTCTTA -1 433217 NM_000296.3(PKD1):c.2932C>T (p.Gln978Ter) PKD1 Jan 30, 2017 MedGen:CN169374 not specified germline 16 2113214 ACCATCAACGACAAGCAGTCCCTGACCTTCCAGAACGTGGTCTTCAATGTCATTTATCAGA 869025345 223782 NM_001145408.1(NONO):c.1093C>T (p.Arg365Ter) NONO Jun 08, 2017 MedGen:C4225417,OMIM:300967,Orphanet:ORPHA466791 Mental retardation, X-linked, syndromic 34 germline X 71297900 ATGCGGCGGCAGCAAGAAGAAATGATGCGGCGACAGCAGGAAGGATTCAAGGGAACCTTCC 191346286 190114 NM_006158.4(NEFL):c.1261C>T (p.Arg421Ter) NEFL Nov 01, 2014 MedGen:C1843225,OMIM:607684,Orphanet:ORPHA99939 Charcot-Marie-Tooth disease type 2E germline 8 24953704 GGCTACTCCCAGAGCTCCCAGGTCTTTGGCCGATCTGCCTACGGCGGTTTACAGACCAGCT 875989899 245525 NM_000527.4(LDLR):c.373C>T (p.Gln125Ter) LDLR Mar 25, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11105279 CGCTGCCACGATGGGAAGTGCATCTCTCGGCAGTTCGTCTGTGACTCAGACCGGGACTGCT 587776999 70531 NM_001258221.1(KCTD1):c.92C>T (p.Pro31Leu) KCTD1 Jan 29, 2014 MedGen:C1867020,OMIM:181270,Orphanet:ORPHA2036 Scalp ear nipple syndrome germline;inherited 18 26501144 CTCCAGCACAACTCACAAAATCCAATGCGCCTGTCCACATTGATGTGGGCGGCCACATGTA 121918241 16462 NM_015506.2(MMACHC):c.394C>T (p.Arg132Ter) MMACHC Aug 04, 2017 MedGen:C1848561,OMIM:277400,Orphanet:ORPHA26;MedGen:CN517202 Methylmalonic acidemia with homocystinuria;not provided germline;unknown 1 45508329 CATGTAGCTGGGGCTGCTTACTACTACCAACGACAAGATGTGGAGGCTGACCCATGGGGGA 199472730 67784 NM_000218.2(KCNQ1):c.830C>T (p.Ser277Leu) KCNQ1 Oct 27, 2017 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MeSH:D008133,MedGen:C0023976,SNOMED CT:9651007;MedGen:CN517202 Congenital long QT syndrome;Long QT syndrome;not provided germline 11 2572895 ACATCGGCTTCCTGGGCCTCATCTTCTCCTCGTACTTTGTGTACCTGGCTGAGAAGGACGC 56019914 427074 NM_001171.5(ABCC6):c.345+26C>T ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16219796 CGATGGTAATGATGCCTTCAGTCTGGAGCCCGGCTTCCTCCCAGCTGCTGCTTTGCCTGCC 786202064 184902 NM_007294.3(BRCA1):c.4834C>T (p.Gln1612Ter) BRCA1 Oct 14, 2016 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome germline 17 43071080 GTTCCCCAATTGAAAGTTGCAGAATCTGCCCAGAGTCCAGCTGCTGCTCATACTACTGATA 771663107 205552 NM_001369.2(DNAH5):c.4348C>T (p.Gln1450Ter) DNAH5 Apr 27, 2016 MedGen:C1837618,OMIM:608644;MedGen:C0022521,OMIM:244400,Orphanet:ORPHA98861,SNOMED CT:42402006 Ciliary dyskinesia, primary, 3;Kartagener syndrome germline 5 13865675 GAAAAAATTAACAATGAACTCTTAGAATTCCAGAACAGGTAAGAAATTAAATGTTTAGCAT 28929485 32061 NM_004004.5(GJB2):c.50C>T (p.Ser17Phe) GJB2 May 01, 2002 MedGen:C1835678,OMIM:148210 Keratitis-ichthyosis-deafness syndrome, autosomal dominant germline 13 20189532 AGACGATCCTGGGGGGTGTGAACAAACACTCCACCAGCATTGGAAAGATCTGGCTCACCGT 121912882 32418 NM_033150.2(COL2A1):c.2503C>T (p.Arg835Cys) COL2A1 Jun 22, 2017 MedGen:C1851536,OMIM:132450,Orphanet:ORPHA166011;Human Phenotype Ontology:HP:0000545,MedGen:C0027092,Orphanet:ORPHA98619;MedGen:CN517202 Epiphyseal dysplasia, multiple, with myopia and conductive deafness;Myopia;not provided germline;unknown 12 47979534 GGAGCCACTGGATTCCCTGGAGCTGCTGGCCGCGTTGGACCCCCAGGCTCCAATGTAAGTG 755549444 191567 NM_014425.4(INVS):c.2509C>T (p.Gln837Ter) INVS Jun 06, 2014 MedGen:C1865872,OMIM:602088,SNOMED CT:444558002 Infantile nephronophthisis germline 9 100292766 CACCATCGTACACCAAGAAACAAAGTGACACAAGCCAAGCTCACAGGAGGGCTCTATTCAC -1 440701 NM_014946.3(SPAST):c.838C>T (p.Gln280Ter) SPAST Jun 04, 2015 MedGen:CN517202 not provided germline 2 32114793 AGTGGTTTATCCATGGTTTCTGGAGTGAAACAGGGATCTGGTCCTGCTCCTACCACTCATA 969786171 451643 NM_015120.4(ALMS1):c.4183C>T (p.Gln1395Ter) ALMS1 Apr 10, 2017 MedGen:C0268425,OMIM:203800,Orphanet:ORPHA64,SNOMED CT:63702009 Alstrom syndrome germline 2 73450707 CATACAGAGAAGCCGAGTATTTTCTACCAACAGTCGTTGCCAGGTAGTCATCTAACTGAAG 786204684 187075 NR_003051.3(RMRP):n.64C>T RMRP Dec 15, 2014 MedGen:C0220748,OMIM:250250,Orphanet:ORPHA175,SNOMED CT:7720002 Metaphyseal chondrodysplasia, McKusick type germline;unknown 9 35657955 CACTGAGGACTCTGTTCCTCCCCTTTCCGCCTAGGGGAAAGTCCCCGGACCTCGGGCAGAG 121913332 191748 NM_000038.5(APC):c.4348C>T (p.Arg1450Ter) APC Dec 02, 2016 MeSH:D015179,MedGen:CN236642;MedGen:C2713442,OMIM:175100;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Colorectal Neoplasms;Familial adenomatous polyposis 1;Hereditary cancer-predisposing syndrome;not provided germline;somatic 5 112839942 CCACCACCTCCTCAAACAGCTCAAACCAAGCGAGAAGTACCTAAAAATAAAGCACCTACTG 587783680 168859 NM_001197104.1(KMT2A):c.8095C>T (p.Arg2699Ter) KMT2A Mar 31, 2014 MedGen:C1854630,OMIM:605130,Orphanet:ORPHA319182 Wiedemann-Steiner syndrome germline 11 118503987 AGAACAGTGATTTCTTCAGGTGGAGAGGAACGACTGGCATCCCATAATTTATTTCGGGAGG 137852961 19589 NM_153638.3(PANK2):c.790C>T (p.Arg264Trp) PANK2 Aug 01, 2001 MedGen:C0018523,OMIM:234200,Orphanet:ORPHA157850,SNOMED CT:2992000 Pigmentary pallidal degeneration germline 20 3908087 TCCAATGTGGCTTATGGGTCTACAGGCATTCGGGACGTGCACCTCGAGCTGAAGGACCTGA -1 444920 NM_000192.3(TBX5):c.668C>T (p.Thr223Met) TBX5 Oct 30, 2017 MedGen:CN517202 not provided germline 12 114385563 TTGTTCTCTCTTCCTCTTTCCTTCAGATCACGCAATTAAAGATTGAGAATAATCCCTTTGC 121917903 16747 NM_000124.3(ERCC6):c.229C>T (p.Arg77Ter) ERCC6 Oct 29, 2015 MedGen:C0751038,OMIM:133540,Orphanet:ORPHA90322;MedGen:C1833561,OMIM:600630,Orphanet:ORPHA178338 Cockayne syndrome B;UV-sensitive syndrome germline 10 49532736 AGGAGAGGGCCAGCCCTGCTGCACATCGACCGACATCAGATCCAGGCAGTAGAGCCTAGCG 1060499809 389254 NM_001039141.2(TRIOBP):c.1447C>T (p.Gln483Ter) TRIOBP Jun 04, 2016 MedGen:C1853276,OMIM:609823 Deafness, autosomal recessive 28 germline 22 37724003 ACACGAGACAACCCCAGAACATCCTGTGCCCAGCGGGACAATCCCAGAGCCTCCTCTCCCA 764776104 259908 NM_017890.4(VPS13B):c.1915C>T (p.Arg639Ter) VPS13B Jun 19, 2017 MedGen:CN517202 not provided germline 8 99147912 GTGGCTCTTCTGGAGGAATATATTCCTACTCGACATACAAGTGTTACTCTCCTCAAATGTA 879255495 247290 NM_007294.3(BRCA1):c.628C>T (p.Gln210Ter) BRCA1 Oct 02, 2015 MedGen:C2676676,OMIM:604370 Breast-ovarian cancer, familial 1 germline 17 43095888 GGAGATCAAGAATTGTTACAAATCACCCCTCAAGGAACCAGGGATGAAATCAGTTTGGATT 781144010 464728 NM_177438.2(DICER1):c.901C>T (p.Gln301Ter) DICER1 Jul 21, 2017 MedGen:CN072455,OMIM:601200 DICER1-related pleuropulmonary blastoma cancer predisposition syndrome germline 14 95126582 AAAGAAAGAGATTCTACTTTAATTTCGAAACAGGTAAGCATATACCAAGTAGGTATAGTGA 80358920 46632 NM_000059.3(BRCA2):c.6952C>T (p.Arg2318Ter) BRCA2 Nov 01, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;Human Phenotype Ontology:HP:0100013,MeSH:D001943,MedGen:C1458155,Orphanet:ORPHA180250,SNOMED CT:126926005;MedGen:CN517202 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;Neoplasm of the breast;not provided germline;somatic 13 32346841 AATAATTGTTTCCTAGGCACAATAAAAGATCGAAGATTGTTTATGCATCATGTTTCTTTAG 137852522 25032 NM_000425.4(L1CAM):c.3581C>T (p.Ser1194Leu) L1CAM Nov 05, 2015 MedGen:C0795953,OMIM:303350,Orphanet:ORPHA2466;MedGen:C0265216,OMIM:307000,Orphanet:ORPHA2182,SNOMED CT:71779008;MedGen:CN517202 Spastic paraplegia 1;X-linked hydrocephalus syndrome;not provided germline X 153862856 AGGAGAAGGCCTTTGGCAGCAGCCAGCCATCGCTCAACGGGGACATCAAGCCCCTGGGCAG 730880618 179380 NM_000256.3(MYBPC3):c.484C>T (p.Gln162Ter) MYBPC3 Sep 20, 2013 MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005 Primary familial hypertrophic cardiomyopathy germline 11 47350035 GACCCCATTGGCCTCTTCGTGATGCGGCCACAGGATGGCGAGGTGACCGTGGGTGAGTGTG 80338826 29117 NM_002473.5(MYH9):c.2104C>T (p.Arg702Cys) MYH9 Sep 28, 2017 MedGen:C0398641,OMIM:153650,SNOMED CT:234485006;MedGen:C0403445,OMIM:153640,SNOMED CT:236422008;MedGen:CN073381,Orphanet:ORPHA182050;MedGen:C0340978,OMIM:155100;MedGen:C1854520,OMIM:605249;MedGen:CN517202 Epstein syndrome;Fechtner syndrome;MYH9 related disorders;May-Hegglin anomaly;Sebastian syndrome;not provided germline 22 36305985 CTGCGCTGCAACGGTGTTCTCGAGGGCATCCGTATCTGCCGCCAGGGCTTCCCCAACAGGG 104893746 29315 NM_198159.2(MITF):c.943C>T (p.Arg315Ter) MITF Jun 10, 2016 Human Phenotype Ontology:HP:0000365,MedGen:C0018772;Human Phenotype Ontology:HP:0001100,MedGen:C0423318,OMIM:142500,SNOMED CT:247033008;Human Phenotype Ontology:HP:0002290,MedGen:C0221262;Human Phenotype Ontology:HP:0000399,MedGen:C4021806;MedGen:C1860339,OMIM:193510 Hearing impairment;Heterochromia iridis;Poliosis;Prelingual sensorineural hearing impairment;Waardenburg syndrome type 2A germline;unknown 3 69956460 CCTTTCCTGTGCTCTTTTCTTGAAGTTGAACGAAGAAGAAGATTTAACATAAATGACCGCA 201943194 273561 NM_001277115.1(DNAH11):c.6727C>T (p.Arg2243Ter) DNAH11 Jan 24, 2017 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244;MedGen:C2678473,OMIM:611884 Ciliary dyskinesia;Ciliary dyskinesia, primary, 7 germline;maternal 7 21710596 TATTTTATAGGTCTCTTCTCATCCATTCTACGAGAACAAGCAAATCTTAAGCATGATGGAC 121907962 18943 NM_000520.5(HEXA):c.409C>T (p.Arg137Ter) HEXA Apr 27, 2016 MedGen:C0039373,OMIM:272800,Orphanet:ORPHA845,SNOMED CT:111385000;MedGen:CN517202 Tay-Sachs disease;not provided germline 15 72355562 CTCCTCTCTGAGACTGTCTGGGGAGCTCTCCGAGGTAACAAATTGGGGCTGATTAAAAGAG 727504329 174783 NM_000256.3(MYBPC3):c.1210C>T (p.Gln404Ter) MYBPC3 Jan 26, 2017 Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Hypertrophic cardiomyopathy;Primary familial hypertrophic cardiomyopathy;not provided germline 11 47343505 GTCAAATGGCTCAAGAATGGCCAGGAGATCCAGATGAGCGGCAGGTGCAGCCTGGGGTGGG 72558199 40287 NM_000392.4(ABCC2):c.3196C>T (p.Arg1066Ter) ABCC2 Jun 14, 2016 MedGen:C0022350,OMIM:237500,Orphanet:ORPHA234,SNOMED CT:44553005 Dubin-Johnson syndrome germline 10 99832069 TTGCACAAGCAACTGCTGAACAATATCCTTCGAGCACCTATGAGATTTTTTGACACAACAC 80356881 69893 NM_007294.3(BRCA1):c.4552C>T (p.Gln1518Ter) BRCA1 Sep 08, 2016 MedGen:C2676676,OMIM:604370 Breast-ovarian cancer, familial 1 germline 17 43074454 TGGTACATGCACAGTTGCTCTGGGAGTCTTCAGAATAGAAACTACCCATCTCAAGAGGAGC 864309503 215003 NM_014941.3(MORC2):c.568C>T (p.Arg190Trp) MORC2 Apr 17, 2017 MedGen:C4225243,OMIM:616688,Orphanet:ORPHA466768 Charcot-Marie-Tooth disease, axonal, type 2z germline 22 30941503 GCCTATGCCGCTGTGCTCTATATTGATCCCCGGATGAGGATCTTCATCCATGGGCACAAGG 63750778 95977 NM_000251.2(MSH2):c.1009C>T (p.Gln337Ter) MSH2 Feb 14, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:C2936783,OMIM:120435 Hereditary cancer-predisposing syndrome;Lynch syndrome;Lynch syndrome I germline 2 47416362 GCTGCCTTGCTGAATAAGTGTAAAACCCCTCAAGGACAAAGACTTGTTAACCAGTGGATTA 876658541 235788 NM_001042492.2(NF1):c.6772C>T (p.Arg2258Ter) NF1 Jun 20, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Neurofibromatosis, type 1;not provided germline 17 31338092 GCTCTTGTTGTCTTTGGGTGTATTAGCAAACGAGTGTCTCATGGGCAGATAAAGCAGATAA 797044900 205297 NM_013275.5(ANKRD11):c.7825C>T (p.Gln2609Ter) ANKRD11 Feb 06, 2013 MeSH:D030342,MedGen:C0950123 Inborn genetic diseases germline 16 89268645 TGTGTCCCGCAGACTTGCCTCCTCATGCGGCAGCAGCACGAGGCCGCGGCCCTGAACGCCG 878854411 243884 NM_016239.3(MYO15A):c.4108C>T (p.Arg1370Cys) MYO15A Jun 06, 2016 MedGen:C1838263,OMIM:600316 Deafness, autosomal recessive 3 germline 17 18131308 GCCAAAACCGTCAGGAACGACAACTCCAGCCGCTTTGGGAAGTTTGTGGAAATCTTTCTGG 587782682 152449 NM_004329.2(BMPR1A):c.682C>T (p.Arg228Ter) BMPR1A Jul 21, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0345893,OMIM:174900,Orphanet:ORPHA329971,SNOMED CT:9273005 Hereditary cancer-predisposing syndrome;Juvenile polyposis syndrome germline 10 86917140 AACCTTTTACTTTTTTCTATAAAGGTTCAGCGAACTATTGCCAAACAGATTCAGATGGTCC 63750483 95148 NM_000249.3(MLH1):c.1192C>T (p.Gln398Ter) MLH1 Sep 05, 2013 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Lynch syndrome germline 3 37025790 TCCCGGGAACAGAAGCTTGATGCATTTCTGCAGCCTCTGAGCAAACCCCTGTCCAGTCAGC 121908945 21782 NM_006892.3(DNMT3B):c.88C>T (p.Gln30Ter) DNMT3B Sep 15, 2002 MedGen:C0398788,OMIM:242860,SNOMED CT:234633000 Centromeric instability of chromosomes 1,9 and 16 and immunodeficiency germline 20 32780411 TCGATCCTCGTCAACGGGGCCTGCAGCGACCAGTCCTCCGACTCGCCCCCAATCCTGGAGG 1064794935 414882 NM_004321.7(KIF1A):c.37C>T (p.Arg13Cys) KIF1A Mar 27, 2017 MedGen:CN517202 not provided germline 2 240797716 GGGGCTTCGGTGAAGGTGGCGGTGCGGGTCCGCCCCTTCAATTCCCGGGAAATGAGCCGTG 796052820 203899 NM_001184880.1(PCDH19):c.1855C>T (p.Gln619Ter) PCDH19 Apr 17, 2017 MedGen:CN517202 not provided germline X 100406743 GAGGGCGACCGCGGCTTCTTTGAAATAGACCAGGTCAATGGCGAAGTCAGAACCACCCGCA 1135401765 424631 NM_015335.4(MED13L):c.5173C>T (p.Gln1725Ter) MED13L Aug 01, 2017 MedGen:C4225208,OMIM:616789,Orphanet:ORPHA369891 Mental retardation and distinctive facial features with or without cardiac defects de novo 12 115982386 CCTGAGCATATGAGAAATTCTTTCATTCTCCAGGTTACTGTTTGCAAGTTTATTATTTACT 80359823 201150 NM_006516.2(SLC2A1):c.884C>T (p.Thr295Met) SLC2A1 Aug 17, 2016 MedGen:CN030711,OMIM:606777;MedGen:CN517202 GLUT1 deficiency syndrome 1;not provided germline 1 42929298 CTCTTGTCTGGCAGGTCTTCTATTACTCCACGAGCATCTTCGAGAAGGCGGGGGTGCAGCA -1 451762 NM_003494.3(DYSF):c.5350C>T (p.Gln1784Ter) DYSF Mar 01, 2017 MedGen:C2931687,Orphanet:ORPHA207073 Dysferlinopathy germline 2 71668763 GAACGGACCCTGTCTCCGCAGGGGAAGCTGCAGATGTGGGTCGACCTATTTCCGAAGGCCC 397514657 48717 NM_024531.4(SLC52A2):c.155C>T (p.Ser52Phe) SLC52A2 Mar 17, 2015 MedGen:C3553538,OMIM:614707;MedGen:CN517202 Brown-Vialetto-Van Laere syndrome 2;not provided germline 8 144359647 CTGCAGGTTGGAGCCTCCCCTCTTACGTCTCTGTGCTTGTGGCTCTGGGGAACCTGGGTCT 118203606 58021 NM_000368.4(TSC1):c.1963C>T (p.Gln655Ter) TSC1 Dec 16, 2014 MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000;MedGen:CN517202 Tuberous sclerosis syndrome;not provided germline 9 132905615 CCAATGGAAGTGCTGGACAGACTGATACAGCAGGGAGCAGACGCGCACAGCAAGGAGCTGA 104894044 23917 NM_000193.3(SHH):c.298C>T (p.Gln100Ter) SHH Aug 29, 2013 MedGen:C1840529,OMIM:142945 Holoprosencephaly 3 germline 7 155811825 GAAAACACCGGAGCGGACAGGCTGATGACTCAGGTAGGAACCCAGCGCCGGGGCGTGGAAT 104893754 28641 NM_001122757.2(POU1F1):c.592C>T (p.Arg198Ter) POU1F1 Apr 01, 1992 MedGen:C2751608,OMIM:613038 Pituitary hormone deficiency, combined 1 germline 3 87262161 GGCTCTGAATTCAGTCAAACAACAATCTGCCGATTTGAAAATCTGCAGCTCAGCTTTAAAA 727504020 177367 NM_000255.3(MUT):c.1207C>T (p.Arg403Ter) MUT Dec 22, 2014 MedGen:C1855114,OMIM:251000 Methylmalonic aciduria due to methylmalonyl-CoA mutase deficiency germline 6 49451591 GCTTTGGGTTTGCCAACTGTGAAAAGTGCTCGAATTGCCAGGAACACACAAATCATCATTC -1 434185 NM_000527.4(LDLR):c.-98C>T LDLR - MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11089451 AGAAACCTCACATTGAAATGCTGTAAATGACGTGGGCCCCGAGTGCAATCGCGGGAAGCCA 886040986 262650 NM_017780.3(CHD7):c.3526C>T (p.Gln1176Ter) CHD7 Sep 05, 2016 MedGen:C0265354,OMIM:214800,Orphanet:ORPHA138,SNOMED CT:47535005 CHARGE association germline 8 60830325 TAGTATTTACTTAAGGTCCTTTTTTAGGTGCAAAAACTTCAAGCTATTCTAAAGCCAATGA 770606675 406969 NM_001458.4(FLNC):c.1948C>T (p.Arg650Ter) FLNC Apr 04, 2017 MedGen:CN239310;MedGen:CN517202 Dilated Cardiomyopathy, Dominant;not provided germline 7 128841304 GTGCACGTCATCTGTGACGATGAGGACATCCGAGACTCACCCTTCATTGCCCACATCCTGC 863225228 214284 NM_153704.5(TMEM67):c.1453C>T (p.Pro485Ser) TMEM67 Feb 23, 2015 MedGen:C1853153,OMIM:610688 Joubert syndrome 6 unknown 8 93787884 GTACCCAACACAATAAATGGAAACATCTACCCTCCCTTAATCACCATTGCCTACAGTGACA 118204052 15783 NM_001080522.2(CC2D2A):c.4582C>T (p.Arg1528Cys) CC2D2A Oct 13, 2016 MedGen:C2676788,OMIM:612285;MedGen:CN517202 Joubert syndrome 9;not provided germline;unknown 4 15599614 CGGTGGAATAGGTATTGTACCTCTACTCTGCGTCACTTCTTGCCTCTGTTAGAAAAAAGTC 45517111 58981 NM_000548.4(TSC2):c.496C>T (p.Gln166Ter) TSC2 Sep 27, 2016 MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000;MedGen:CN517202 Tuberous sclerosis syndrome;not provided germline 16 2055416 GCCGCTTCTCCCCCAGCTGACTTTGTCCTGCAGTGGATGGATGTTGGCTTGTCCTCGGAAT 120074137 17949 NM_030962.3(SBF2):c.2875C>T (p.Gln959Ter) SBF2 May 01, 2003 MedGen:C1858280 Charcot-Marie-Tooth disease type 4B2 with early-onset glaucoma germline 11 9847015 TCCATCACCAAGGAGAAGAAGATTACAATGCAGAACCAGCTACAGCAGAACATGCAAGAAG 80338700 22762 NM_000303.2(PMM2):c.338C>T (p.Pro113Leu) PMM2 Apr 19, 2016 MedGen:C0349653,OMIM:212065,Orphanet:ORPHA79318,SNOMED CT:277893002 Carbohydrate-deficient glycoprotein syndrome type I germline;unknown 16 8806398 GTCTGAGCTACATTGCGAAAATTAAACTCCCGAAGAAGAGGTGGGTTTGCTTTTAACAAAG 148207467 186634 NM_000016.5(ACADM):c.1045C>T (p.Arg349Ter) ACADM Jul 20, 2016 MedGen:C0220710,OMIM:201450,Orphanet:ORPHA42,SNOMED CT:128596003;MedGen:CN517202 Medium-chain acyl-coenzyme A dehydrogenase deficiency;not provided germline;unknown 1 75761221 AGAGCAGCTTGGGAGGTTGATTCTGGTCGTCGAAATACCTATTATGCTTCTATTGCAAAGG 863225004 213858 NM_004006.2(DMD):c.5641C>T (p.Gln1881Ter) DMD Sep 26, 2013 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Duchenne muscular dystrophy germline X 32343232 AAGGCTCTAGAAATTTCTCATCAGTGGTATCAGTACAAGAGGCAGGCTGATGATCTCCTGA 111854391 27563 NM_004612.3(TGFBR1):c.722C>T (p.Ser241Leu) TGFBR1 Sep 01, 2017 MedGen:C2697932,Orphanet:ORPHA60030,SNOMED CT:446263001;MedGen:C2697933,OMIM:609192;MedGen:CN118826,Orphanet:ORPHA91387;MedGen:CN517202 Loeys-Dietz syndrome;Loeys-Dietz syndrome 1;Thoracic aortic aneurysm and aortic dissection;not provided germline 9 99138006 TTAAGATATTCTCCTCTAGAGAAGAACGTTCGTGGTTCCGTGAGGCAGAGATTTATCAAAC -1 450588 NM_004369.3(COL6A3):c.2620C>T (p.Arg874Ter) COL6A3 Jul 31, 2017 MedGen:CN029274,OMIM:158810 Bethlem myopathy 1 germline 2 237377222 GATGAGCTCAATGTGAAGCCAGAGGGGACCCGAATTGCGGTGGCTCAGTACAGCGATGATG -1 427541 NM_007294.3(BRCA1):c.4666C>T (p.Gln1556Ter) BRCA1 Sep 05, 2012 MedGen:C0677776,Orphanet:ORPHA145 Hereditary breast and ovarian cancer syndrome germline 17 43074340 GATTTGACGGAAACATCTTACTTGCCAAGGCAAGATCTAGGTAATATTTCATCTGCTGTAT 121909531 33330 NM_001100.3(ACTA1):c.1000C>T (p.Pro334Ser) ACTA1 Apr 11, 2013 MedGen:C0546264,OMIM:255310,Orphanet:ORPHA2020,SNOMED CT:240084007 Congenital myopathy with fiber type disproportion germline 1 229431633 ACCTCACGCGCTGTCTTGCAGATCATCGCCCCGCCGGAGCGCAAATACTCGGTGTGGATCG -1 458260 NM_000118.3(ENG):c.808C>T (p.Gln270Ter) ENG Jun 14, 2017 MedGen:C0039445,OMIM:187300,Orphanet:ORPHA774,SNOMED CT:21877004 Osler hemorrhagic telangiectasia syndrome germline 9 127825239 TCCTGGCTCATCGACGCCAACCACAACATGCAGATCTGGGTGAGTTGTGCGCAGCTCCCGG 387906769 39054 NM_002052.4(GATA4):c.487C>T (p.Pro163Ser) GATA4 Dec 01, 2010 MedGen:C3280781,OMIM:614430;Human Phenotype Ontology:HP:0001636,MedGen:C0039685,OMIM:187500,Orphanet:ORPHA3303,SNOMED CT:86299006;MedGen:C3280777,OMIM:614429 Atrioventricular septal defect 4;Tetralogy of Fallot;Ventricular septal defect 1 germline 8 11708799 GGCTTCGCGGGCTCCTACTCCAGCCCCTACCCGGCTTACATGGCCGACGTGGGCGCGTCCT -1 481663 NM_015120.4(ALMS1):c.10825C>T (p.Arg3609Ter) ALMS1 Oct 20, 2017 MedGen:CN517202 not provided germline 2 73572699 TTGAATGAACTGTGGAACAAGTATCGGGAGCGACAGAGGCAACAGAGACAGCCTGAGTTGG 137852258 25651 NM_000133.3(F9):c.1135C>T (p.Arg379Ter) F9 Aug 01, 1990 MedGen:C0008533,OMIM:306900,Orphanet:ORPHA98879,SNOMED CT:41788008 Hereditary factor IX deficiency disease germline X 139561820 CTTCAGTACCTTAGAGTTCCACTTGTTGACCGAGCCACATGTCTTCGATCTACAAAGTTCA 121918366 24115 NM_001174125.1(SLC11A2):c.1333C>T (p.Arg445Cys) SLC11A2 Jan 01, 2006 MedGen:C2673913,OMIM:206100,Orphanet:ORPHA83642 Hypochromic microcytic anemia with iron overload germline 12 50992291 TGGTCACGCTTTGCCCGAGTGGTTCTGACTCGCTCTATTGCCATCATCCCCACTCTGCTTG 886037707 248840 NM_177438.2(DICER1):c.3658C>T (p.Q1220*) DICER1 Nov 10, 2014 MedGen:CN072455,OMIM:601200;MedGen:C0027672,SNOMED CT:699346009 DICER1-related pleuropulmonary blastoma cancer predisposition syndrome;Hereditary cancer-predisposing syndrome germline 14 95103738 CCCGTGCAACCAACTACCTCATATTCCATTCAGAATTTATACAGTTACGAGAACCAGCCCC 587779058 95932 NM_000249.3(MLH1):c.982C>T (p.Gln328Ter) MLH1 Oct 15, 2014 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Hereditary cancer-predisposing syndrome;Lynch syndrome germline 3 37020407 CACGAGGAGAGCATCCTGGAGCGGGTGCAGCAGCACATCGAGAGCAAGCTCCTGGGCTCCA 1064793307 409191 NM_130838.1(UBE3A):c.1516C>T (p.Arg506Cys) UBE3A Mar 17, 2017 MedGen:CN517202 not provided germline 15 25370598 TTGAATCCATATTTGAGACTCAAAGTTAGACGTGACCATATCATAGATGATGCACTTGTCC 373715782 98178 NM_000016.5(ACADM):c.616C>T (p.Arg206Cys) ACADM Jul 14, 2017 MedGen:C0220710,OMIM:201450,Orphanet:ORPHA42,SNOMED CT:128596003;MedGen:CN517202;MedGen:CN169374 Medium-chain acyl-coenzyme A dehydrogenase deficiency;not provided;not specified germline;unknown 1 75745822 TGTGTATCTCTTAGGTATTTTTTATTGGCACGTTCTGATCCAGATCCTAAAGCTCCTGCTA 397514672 49906 NM_000088.3(COL1A1):c.4160C>T (p.Ala1387Val) COL1A1 Sep 01, 2011 MedGen:C0268360,OMIM:166210,SNOMED CT:86470003 Osteogenesis imperfecta, recessive perinatal lethal unknown 17 50185866 TGGACCAGCAGACTGGCAACCTCAAGAAGGCCCTGCTCCTCCAGGGCTCCAACGAGATCGA -1 426845 NM_001171.5(ABCC6):c.3790C>T (p.Gln1264Ter) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16157755 GCAGCTCAGCCCCCCTGGCCTCAGGGCGGGCAGATCGAGTTCCGGGACTTTGGGCTAAGAT -1 427449 NM_001009944.2(PKD1):c.11461C>T (p.Gln3821Ter) PKD1 Jun 15, 2016 MedGen:C0085548,OMIM:263200,Orphanet:ORPHA731,SNOMED CT:28770003 Autosomal recessive polycystic kidney disease germline 16 2091857 TGTGCCGTGTATGACAGCGGGGGCTACGTGCAGGAGCTGGGCCTGAGCCTGGAGGAGAGCC 28937580 21742 NM_005450.4(NOG):c.103C>T (p.Pro35Ser) NOG Feb 12, 2018 MedGen:C1969652,OMIM:611377,Orphanet:ORPHA140908;Human Phenotype Ontology:HP:0100264,MedGen:C1861385,OMIM:185800,Orphanet:ORPHA3250;MedGen:C1866656,OMIM:184460,Orphanet:ORPHA140917 Brachydactyly type B2;Cushing's symphalangism;Stapes ankylosis with broad thumb and toes germline 17 56594326 GCCGGCGGCCAGCACTATCTCCACATCCGCCCGGCACCCAGCGACAACCTGCCCCTGGTGG 28936371 24135 NM_000352.4(ABCC8):c.4477C>T (p.Arg1493Trp) ABCC8 Mar 24, 2014 MedGen:C1257959,OMIM:256450,SNOMED CT:360339005 Persistent hyperinsulinemic hypoglycemia of infancy germline;unknown 11 17394334 CAGGGACAGAGGCAGCTGTTCTGCCTGGCCCGGGCCTTCGTGAGGAAGACCAGCATCTTCA 1060501695 408232 NM_000051.3(ATM):c.8140C>T (p.Gln2714Ter) ATM May 19, 2016 MedGen:CN517202 not provided germline 11 108335098 TGTGTAGGTTCCGATGGCAAGGAGAGGAGACAGCTTGTTAAGGTGAGCCTTCCCTTCTCTG 74315427 18365 NM_020436.4(SALL4):c.1849C>T (p.Arg617Ter) SALL4 Jul 01, 2003 MedGen:C1623209,OMIM:607323,Orphanet:ORPHA93293 Duane-radial ray syndrome germline 20 51790634 GGTAACCTGAAGACACACCTTGGGGTTCACCGAACCAACACATCCATTAAGACGCAGCATT 137853859 34023 NM_000403.3(GALE):c.505C>T (p.Arg169Trp) GALE Jun 11, 2014 MedGen:C0751161,OMIM:230350,Orphanet:ORPHA79238,SNOMED CT:8849004 UDPglucose-4-epimerase deficiency germline 1 23797718 AAGTCCAAGTTCTTCATCGAGGAAATGATCCGGGACCTGTGCCAGGCAGACAAGGTGAGGG 398122735 97241 NM_000059.3(BRCA2):c.1945C>T (p.Gln649Ter) BRCA2 Sep 08, 2016 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome germline 13 32336300 TTGCATTCTTCTGTGAAAAGAAGCTGTTCACAGAATGATTCTGAAGAACCAACTTTGTCCT 398123585 99539 NM_001165963.1(SCN1A):c.1837C>T (p.Arg613Ter) SCN1A Jun 29, 2017 MedGen:C0393706,Orphanet:ORPHA1934;MedGen:C1864987,OMIM:609634;MedGen:C1858673,OMIM:604403;MedGen:C1858673,OMIM:604403;MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002;MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002;MedGen:CN517202 Early infantile epileptic encephalopathy;Familial hemiplegic migraine type 3;Generalized epilepsy with febrile seizures plus, type 2;Generalized epilepsy with febrile seizures plus, type 2;Severe myoclonic epilepsy in infancy;Severe myoclonic epilepsy in infancy;not provided de novo;germline;unknown 2 166043875 AGCCGTAGAGATTCCTTGTTTGTGCCCCGACGACACGGAGAGAGACGCAACAGCAACCTGA 587783450 168623 NM_017780.3(CHD7):c.6157C>T (p.Arg2053Ter) CHD7 Dec 30, 2015 MedGen:C0265354,OMIM:214800,Orphanet:ORPHA138,SNOMED CT:47535005;MedGen:CN517202 CHARGE association;not provided germline 8 60852882 ATTGAGCCGATCACAGAGGAGCGAGCCTCTCGAACTCTGTACCGCATTGAGCTGCTACGGA 587783568 169875 NM_178151.2(DCX):c.586C>T (p.Arg196Cys) DCX Jun 12, 2017 Human Phenotype Ontology:HP:0002282,MedGen:C0008519;MedGen:CN517202 Heterotopia;not provided germline X 111401109 CGCAGTGGGGTGAAGCCTCGGAAGGCTGTGCGTGTGCTTCTGAACAAGAAGACAGCCCACT 200203460 185684 NM_030813.5(CLPB):c.1249C>T (p.Arg417Ter) CLPB Sep 14, 2016 MedGen:C4225393,OMIM:616271,Orphanet:ORPHA445038 3-methylglutaconic aciduria with cataracts, neurologic involvement, and neutropenia germline;maternal 11 72302312 ATCAGGCTGGACATGTCCGAGTTCCAGGAGCGACACGAGGTGAGTGATGACAGTCCTTGAT 727504175 177295 NM_001083962.1(TCF4):c.748C>T (p.Gln250Ter) TCF4 Mar 13, 2014 MedGen:C1970431,OMIM:610954,Orphanet:ORPHA2896 Pitt-Hopkins syndrome germline 18 55275660 GGAATGTTGGGCAACTCTTCTCATATTCCACAGTCCAGCAGCTACTGTAGCCTGCATCCAC 794729221 198605 NM_006516.2(SLC2A1):c.724C>T (p.Gln242Ter) SLC2A1 Jul 25, 2014 MedGen:CN030711,OMIM:606777;Human Phenotype Ontology:HP:0001249,MedGen:C1843367 GLUT1 deficiency syndrome 1;Intellectual disability de novo;unknown 1 42929736 CGCGGGACAGCTGACGTGACCCATGACCTGCAGGAGATGAAGGAAGAGAGTCGGCAGATGA 794729305 198745 NM_001256850.1(TTN):c.96304C>T (p.Arg32102Ter) TTN May 16, 2014 MedGen:CN517202 not provided germline 2 178535388 GCAGAAAGATGGCTCCGTGTAGGACAGGCCCGAGAAACACGTTATACCGTGATCAACTTAT 281874719 36013 NM_000495.4(COL4A5):c.3700C>T (p.Gln1234Ter) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108668414 GAACCAGGCTTTCACGGTTTCCCTGGTGTGCAGGGTCCCCCAGGCCCTCCTGGTTCTCCGG 80338841 26809 NM_001110556.1(FLNA):c.1923C>T (p.Gly641=) FLNA May 02, 2013 MedGen:C0262436,OMIM:314400,Orphanet:ORPHA1864;MedGen:C1848213,OMIM:300049,OMIM:300537,SNOMED CT:448227009 Cardiac valvular dysplasia, X-linked;Periventricular nodular heterotopia 1 germline X 154364625 TGATGTGCGCTACTGGCCGCAGGAGGCTGGCGAGTATGCCGTTCACGTGCTGTGCAACAGC 1057517803 360124 NM_002693.2(POLG):c.823C>T (p.Arg275Ter) POLG Jul 20, 2016 MedGen:CN517202 not provided germline 15 89330113 TTAGTGGTGGGGCACAATGTTTCCTTTGACCGAGCTCATATCAGGGAGCAGTACCTGATCC 876661402 236864 NM_006016.5(CD164):c.574C>T (p.Arg192Ter) CD164 May 31, 2016 MedGen:C4283893,OMIM:616969 Deafness, autosomal dominant 66 germline 6 109368871 TTTCTTTATAAATTCTGCAAATCTAAAGAACGAAATTACCACACTCTGTAAACAGACCCAT 147105770 70487 NM_005236.2(ERCC4):c.1765C>T (p.Arg589Trp) ERCC4 Jan 19, 2017 MedGen:CN177726 Xeroderma pigmentosum, type f/Cockayne syndrome germline 16 13935697 GTTCTTTATGACGCAGAGCTAACCTTTGTTCGGCAGCTTGAAATTTACAGGGCGAGTAGGC 587776946 48694 NM_014813.2(LRIG2):c.2125C>T (p.Arg709Ter) LRIG2 Mar 07, 2013 MedGen:C3554520,OMIM:615112 Urofacial syndrome 2 germline 1 113114471 ATTAGACCCCTGGAGGATAAGACAGTAACACGAGGTGAAACTGCGGTGTTACAGTGCATAG 57448541 77481 NM_005554.3(KRT6A):c.508C>T (p.Leu170Phe) KRT6A Feb 03, 2016 MedGen:CN517202 not provided germline 12 52492681 CGGGCTGAGGAGCGTGAACAGATCAAGACCCTCAACAACAAGTTTGCCTCCTTCATCGACA 786201367 184776 NM_001042492.2(NF1):c.7909C>T (p.Arg2637Ter) NF1 Jun 08, 2017 MedGen:C0553586,OMIM:193520,SNOMED CT:403820003;MedGen:C0027672,SNOMED CT:699346009;Human Phenotype Ontology:HP:0012209,MedGen:C0349639,OMIM:607785,Orphanet:ORPHA86834;MedGen:C1834235,OMIM:162210;MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003;MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003;MedGen:C2931482,OMIM:601321,Orphanet:ORPHA638 Café-au-lait macules with pulmonary stenosis;Hereditary cancer-predisposing syndrome;Juvenile myelomonocytic leukemia;Neurofibromatosis, familial spinal;Neurofibromatosis, type 1;Neurofibromatosis, type 1;Neurofibromatosis-Noonan syndrome germline;unknown 17 31357308 GTAAAATATACCACAGATGAGTTTGATCAACGAATTCTTTATGAATACTTAGCAGAGGCCA 80338829 29113 NM_002473.5(MYH9):c.3493C>T (p.Arg1165Cys) MYH9 Apr 05, 2011 MedGen:CN073381,Orphanet:ORPHA182050;MedGen:C1854520,OMIM:605249 MYH9 related disorders;Sebastian syndrome germline 22 36295069 TCTGAGGGGATTTCTCTGTCCAGGTCAAAACGTGAGCAGGAGGTGAACATCCTGAAGAAGA 137854587 25961 NM_000397.3(CYBB):c.625C>T (p.His209Tyr) CYBB Jun 01, 1991 MedGen:C1844376,OMIM:306400;MedGen:CN517202 Chronic granulomatous disease, X-linked;not provided germline X 37796092 AGGTCTTACTTTGAAGTCTTTTGGTACACACATCATCTCTTTGTGATCTTCTTCATTGGCC 387906912 39441 NM_022436.2(ABCG5):c.46C>T (p.Gln16Ter) ABCG5 Nov 15, 2010 MedGen:C0342907,OMIM:210250,Orphanet:ORPHA2882,SNOMED CT:238104009 Sitosterolemia germline 2 43838634 TCTTTGACCCCCGGAGGGTCCATGGGTCTCCAAGTAAACAGAGGCTCCCAGAGCTCCCTGG 397516061 51944 NM_000256.3(MYBPC3):c.613C>T (p.Gln205Ter) MYBPC3 May 23, 2017 MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Primary familial hypertrophic cardiomyopathy;not provided germline 11 47349815 AAATGGGTGGACCTGAGCAGCAAGGTGGGCCAGCACCTGCAGCTGCACGACAGCTACGACC 587780462 135785 NM_018344.5(SLC29A3):c.1228C>T (p.Gln410Ter) SLC29A3 Feb 03, 2014 MedGen:C1864445,OMIM:602782,Orphanet:ORPHA168569 Histiocytosis-lymphadenopathy plus syndrome germline 10 71362408 CCCCGCGTCCACCTGAAGACTGTGGTCTTCCAGTCCGATGTGTACCCCGCACTCCTCAGCT 121434347 17059 NM_001003841.2(SLC6A19):c.718C>T (p.Arg240Ter) SLC6A19 Sep 01, 2004 MedGen:C0018609,OMIM:234500,Orphanet:ORPHA2116,SNOMED CT:80902009 Neutral 1 amino acid transport defect germline 5 1213517 CCCTATGTCGTCCTGACCATCTTCCTCATCCGAGGCCTGACGCTGAAGGGCGCCACCAATG 137853580 29854 NM_001558.3(IL10RA):c.251C>T (p.Thr84Ile) IL10RA Nov 19, 2009 MedGen:C4016214 Inflammatory bowel disease 28 germline 11 117989504 ACTGTAGCCAGACCCTGTCCTATGACCTTACCGCAGTGACCTTGGACCTGTACCACAGCAA 727505284 173115 NM_001256850.1(TTN):c.75793C>T (p.Arg25265Ter) TTN May 11, 2016 EFO:EFO_0000407,Human Phenotype Ontology:HP:0001644,MedGen:C0007193,Orphanet:ORPHA217604,SNOMED CT:195021004;MedGen:CN517202 Primary dilated cardiomyopathy;not provided germline 2 178565416 GATCTTAAAATAGAAATTCCAGTTATAGGCCGACCAAGACCTAACATTTCTTGGGTCAAAG 61753965 153173 NM_004992.3(MECP2):c.1216C>T (p.Gln406Ter) MECP2 May 06, 2014 MedGen:C1968550,OMIM:300055;MedGen:C0035372,OMIM:312750,Orphanet:ORPHA778,SNOMED CT:68618008;MedGen:CN517202 Mental retardation, X-linked, syndromic 13;Rett syndrome;not provided de novo;germline;maternal;unknown X 154030612 TCCGAGGACCCCACCAGCCCCCCTGAGCCCCAGGACTTGAGCAGCAGCGTCTGCAAAGAGG 104894330 32872 NM_000486.5(AQP2):c.377C>T (p.Thr126Met) AQP2 Feb 01, 1997 MedGen:C4015884 Diabetes insipidus, nephrogenic, autosomal recessive germline 12 49954171 TTCTCTGTCCCCAGCTCAGCAACAGCACGACGGCTGGCCAGGCGGTGACTGTGGAGCTCTT 104894894 25997 NM_000475.4(NR0B1):c.1183C>T (p.Gln395Ter) NR0B1 Jul 20, 2016 MedGen:C0342482,OMIM:300200,SNOMED CT:237764004;MedGen:CN517202 Congenital adrenal hypoplasia, X-linked;not provided germline X 30304809 ATTTTTCTCCCTCCAGACGTGCCGGGCCTGCAGTGCGTGAAGTACATTCAGGGACTCCAGT 35916840 76505 NM_000370.3(TTPA):c.661C>T (p.Arg221Trp) TTPA Sep 08, 2017 MedGen:C1848533,OMIM:277460,Orphanet:ORPHA96;MedGen:CN517202 Ataxia with vitamin E deficiency;not provided germline 8 63064208 AAACCATTCCTGACTGAAAAAATTAAGGAACGGGTGAGTAAAATATATTCAAGTCTGTGTT 557344672 425028 NM_000527.4(LDLR):c.542C>T (p.Pro181Leu) LDLR Mar 01, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11105448 CCGACTGCGAAGATGGCTCGGATGAGTGGCCGCAGCGCTGTAGGGGTCTTTACGTGTTCCA 11554273 30972 NM_000516.5(GNAS):c.601C>T (p.Arg201Cys) GNAS Sep 26, 2017 Human Phenotype Ontology:HP:0030078,MeSH:C538231,MedGen:C0152013;MedGen:C0278701;Human Phenotype Ontology:HP:0006744,MeSH:D018268,MedGen:C0206686,Orphanet:ORPHA1501;MeSH:D015179,MedGen:CN236642;MedGen:C1857451,OMIM:219080;MedGen:C2239176,OMIM:114550,Orphanet:ORPHA88673,SNOMED CT:187769009,SNOMED CT:25370001;MeSH:C562393,MedGen:C0151779,SNOMED CT:93655004;MedGen:C0242292,OMIM:174800,Orphanet:ORPHA562;MeSH:D009369,MedGen:C0027651,SNOMED CT:108369006;Human Phenotype Ontology:HP:0100013,MeSH:D001943,MedGen:C1458155,Orphanet:ORPHA180250,SNOMED CT:126926005;MedGen:CN495005,OMIM:617686;Human Phenotype Ontology:HP:0006725,MedGen:C0281361;MedGen:C0206724;MeSH:C535575,MedGen:C1168401,OMIM:275355,Orphanet:ORPHA67037;MeSH:D002583,MedGen:CN236667 Adenocarcinoma of lung;Adenocarcinoma of stomach;Adrenocortical carcinoma;Colorectal Neoplasms;Cushing's syndrome;Hepatocellular carcinoma;Malignant melanoma of skin;McCune-Albright syndrome;Neoplasm;Neoplasm of the breast;PITUITARY ADENOMA 3, MULTIPLE TYPES;Pancreatic adenocarcinoma;Sex cord-stromal tumor;Squamous cell carcinoma of the head and neck;Uterine cervical neoplasms germline;somatic 20 58909365 TCAATTTTGTTTCAGGACCTGCTTCGCTGCCGTGTCCTGACTTCTGGAATCTTTGAGACCA 148918985 98284 NM_000050.4(ASS1):c.793C>T (p.Arg265Cys) ASS1 Jan 18, 2013 MedGen:C0175683,OMIM:215700,Orphanet:ORPHA187 Citrullinemia type I germline 9 130480404 TCTTCCCACAGGGGCAAGCATGGCGTGGGCCGTATTGACATCGTGGAGAACCGCTTCATTG 80358362 102238 NM_015384.4(NIPBL):c.5440C>T (p.Arg1814Ter) NIPBL Aug 27, 2013 MedGen:CN029798,OMIM:122470 Cornelia de Lange syndrome 1 germline 5 37022256 CTCTTCATTTTTCTTTAGCTTGATATGCAACGAGGTGTTCATGGACGATTGATGGATAATT 886039407 260289 NM_000425.4(L1CAM):c.1453C>T (p.Arg485Ter) L1CAM May 16, 2016 MedGen:CN517202 not provided germline X 153868654 TTCCCCTATGCCAATGGGACCCTGGGCATTCGAGACCTCCAGGCCAATGACACCGGACGCT 398123300 98677 NM_000284.3(PDHA1):c.483C>T (p.Tyr161=) PDHA1 Oct 15, 2015 MedGen:CN517202 not provided germline X 19353146 ATCGATGCACATGTATGCCAAGAACTTCTACGGGGGCAATGGCATCGTGGGAGCGCAGGTA 63751194 38609 NM_000249.3(MLH1):c.793C>T (p.Arg265Cys) MLH1 Jun 13, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0009405,Orphanet:ORPHA443090;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:C1333991,OMIM:609310;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Hereditary nonpolyposis colon cancer;Lynch syndrome;Lynch syndrome II;not provided germline;unknown 3 37017508 AACTGGTTGCTTTCTTTTTATTGTTTAGATCGTCTGGTAGAATCAACTTCCTTGAGAAAAG 121434262 18307 NM_024529.4(CDC73):c.25C>T (p.Arg9Ter) CDC73 Dec 01, 2002 MedGen:C1704981,OMIM:145001,Orphanet:ORPHA99880 Hyperparathyroidism 2 germline 1 193122225 GGGAAGATGGCGGACGTGCTTAGCGTCCTGCGACAGTACAACATCCAGAAGAAGGAGATTG 587782798 152602 NM_004360.4(CDH1):c.1147C>T (p.Gln383Ter) CDH1 Jun 27, 2014 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 16 68813322 ACACATCTCTTTGCTCTGCAGTACAAGGGTCAGGTGCCTGAGAACGAGGCTAACGTCGTAA 764079291 402141 NM_000267.3(NF1):c.1246C>T (p.Arg416Ter) NF1 Jul 13, 2017 MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003;MedGen:CN517202 Neurofibromatosis, type 1;not provided germline 17 31201471 TTTCACTATGTGCTGGTAAATTCACTCCATCGAATCATCACCAATGTAAGTCCAAAAGGTA 774903187 396285 NM_001277115.1(DNAH11):c.13075C>T (p.Arg4359Ter) DNAH11 Sep 13, 2016 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244 Ciliary dyskinesia germline 7 21899361 ACCAGGTTCAATGACCTCCTCCTGCGATGCCGAGAACTCGATACTTGGACACAAGACCTTA -1 481680 NM_020166.4(MCCC1):c.1225C>T (p.Arg409Ter) MCCC1 Sep 05, 2017 MedGen:CN517202 not provided germline 3 183041609 GCAGGCCCATTAGTGCACCTCTCTACTCCTCGAGCAGACCCTTCCACCAGGATTGAAACTG 1057516101 354004 NM_172107.3(KCNQ2):c.926C>T (p.Ala309Val) KCNQ2 Mar 31, 2016 MedGen:C3150986,OMIM:613720,Orphanet:ORPHA439218 Early infantile epileptic encephalopathy 7 germline 20 63439599 TCATCGGTGTCTCCTTCTTCGCGCTGCCTGCAGTAAGTCCAGCTGCCCCTGCCTGCCTTGG -1 444035 NM_005045.3(RELN):c.1594C>T (p.Gln532Ter) RELN Sep 18, 2017 MedGen:CN517202 not provided germline 7 103652720 TTGGTTTCTGTGGTCATCAATCCTGAACTTCAGACTCCTGCTACCAAATTTTGTCTCAGGC 61752137 24183 NM_001131025.1(PEX5):c.1279C>T (p.Arg427Ter) PEX5 Jul 01, 2015 MedGen:C1859228,OMIM:214110;MedGen:CN517202 Peroxisome biogenesis disorder 2a (zellweger);not provided germline 12 7208554 TCCCTGCAGCGACAGGCCTGTGAAACCCTACGAGACTGGCTGCGGTACACACCAGCCTATG 119470016 18999 NM_000356.3(TCOF1):c.754C>T (p.Gln252Ter) TCOF1 Mar 01, 1997 MedGen:CN119605,OMIM:154500 Treacher Collins syndrome 1 germline 5 150374288 CCCCCTGGGAAGGCAGGGGCTGTAGCCTCCCAGACCAAGGCAGGGAAGCCAGAGGAGGACT 28933389 28257 NM_000055.2(BCHE):c.812C>T (p.Thr271Met) BCHE Oct 01, 1992 MedGen:C4017550 Butyrylcholinesterase deficiency, fluoride 1 germline 3 165830222 TAACATCTCTTTATGAAGCTAGGAACAGAACGTTGAACTTAGCTAAATTGACTGGTTGCTC 121908959 21715 NM_003494.3(DYSF):c.5713C>T (p.Arg1905Ter) DYSF Oct 04, 2017 MedGen:C1850889,OMIM:253601,Orphanet:ORPHA268;MedGen:C1850808,OMIM:254130,Orphanet:ORPHA45448;MedGen:C1847532,OMIM:606768,Orphanet:ORPHA178400;MedGen:CN517202 Limb-girdle muscular dystrophy, type 2B;Miyoshi muscular dystrophy 1;Myopathy, distal, with anterior tibial onset;not provided germline 2 71674242 CTGGACAAGACTGAGAGCAAAATCCCAGCACGAGTGGTGTTCCAGATCTGGGACAATGACA 111033182 52440 NM_000260.3(MYO7A):c.5101C>T (p.Arg1701Ter) MYO7A Dec 23, 2010 MedGen:C1568247,OMIM:276900,Orphanet:ORPHA231169 Usher syndrome, type 1 germline 11 77202357 AGGCAGGACGTTGTCCGGCTCTTGCAGCTGCGAACGGCGGAGCCCGAGGTGCGTGCCAAGC 372659908 214235 NM_001134831.1(AHI1):c.2212C>T (p.Arg738Ter) AHI1 Jun 08, 2015 MedGen:C1837713,OMIM:608629;MedGen:CN517202 Joubert syndrome 3;not provided germline;unknown 6 135433081 GAGATGAGAGAAGATTCTGCCATATTGGTCCGACAGTTTGATGTTCACAAAAGTTTTATCA 80358659 66267 NM_000059.3(BRCA2):c.4111C>T (p.Gln1371Ter) BRCA2 Sep 24, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline 13 32338466 CAGCACAACATATGTCTTAAATTATCTGGCCAGTTTATGAAGGAGGGAAACACTCAGATTA 121908890 21461 NM_003060.3(SLC22A5):c.505C>T (p.Arg169Trp) SLC22A5 Jul 18, 2016 MedGen:C0342788,OMIM:212140,Orphanet:ORPHA158,SNOMED CT:21764004 Renal carnitine transport defect germline;unknown 5 132384154 TGTCACTCTCCTTTTCTTCCCAGGTTTGGCCGGAAGAATGTGCTGTTCGTGACCATGGGCA 746118995 228192 NM_000527.4(LDLR):c.1897C>T (p.Arg633Cys) LDLR Jun 08, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000;MedGen:CN118841;MedGen:CN517202 Familial hypercholesterolemia;Familial hypercholesterolemias;not provided germline;unknown 19 11120143 ATCATCAACGAAGCCATTTTCAGTGCCAACCGCCTCACAGGTTCCGATGTCAACTTGTTGG 797044970 204599 NM_004700.3(KCNQ4):c.872C>T (p.Pro291Leu) KCNQ4 Aug 20, 2015 MedGen:C2677637,OMIM:600101 DFNA 2 Nonsyndromic Hearing Loss germline 1 40819912 TGACAACCATCGGCTATGGTGACAAGACACCGCACACATGGCTGGGCAGGGTCCTGGCTGC 104894663 22674 NM_013435.2(RAX):c.439C>T (p.Gln147Ter) RAX Feb 01, 2004 MedGen:C1970237,OMIM:611038 Microphthalmia, isolated 3 germline 18 59272465 CGGCGGAACCGCACGACTTTCACCACGTACCAGCTGCATGAGCTGGAGCGCGCGTTCGAGA 753287764 481727 NM_024577.3(SH3TC2):c.2128C>T (p.Gln710Ter) SH3TC2 Dec 07, 2017 MedGen:CN517202 not provided germline 5 149027604 AGTGCCCAAGGGATGTCTCTTCCTATTTGGCAGGTCCACCTTGTCCTCCAGAACACAACCA 886043924 272748 NM_001256850.1(TTN):c.100831C>T (p.Arg33611Ter) TTN Dec 08, 2016 MedGen:C1838244,OMIM:600334,Orphanet:ORPHA609;MedGen:C1861065,OMIM:613765;MedGen:C1863599,OMIM:603689,Orphanet:ORPHA178464;MedGen:C1837342,OMIM:608807,Orphanet:ORPHA140922;MedGen:C2673677,OMIM:611705,Orphanet:ORPHA289377;MedGen:CN517202 Distal myopathy Markesbery-Griggs type;Familial hypertrophic cardiomyopathy 9;Hereditary myopathy with early respiratory failure;Limb-girdle muscular dystrophy, type 2J;Myopathy, early-onset, with fatal cardiomyopathy;not provided germline 2 178530861 AAATCCCCAGAAGCAGTTAAGTCTCCAAAACGAGTGAAATCTCCAGAACCTTCTCACCCGA 794729261 199314 NM_001256850.1(TTN):c.42556C>T (p.Gln14186Ter) TTN Mar 01, 2017 MedGen:CN517202 not provided germline 2 178617872 TCTGCAACTGTTACTGATGTGGTAGAAGGACAGGAGTACAGTTTCCGAGTGAGAGCCCAAA 116840786 23326 NM_033337.2(CAV3):c.86C>T (p.Pro29Leu) CAV3 Apr 15, 2012 Human Phenotype Ontology:HP:0003236,MedGen:C0241005,OMIM:123320;MedGen:CN517202 Creatine phosphokinase, elevated serum;not provided germline 3 8733962 GCAAGGAGATTGACCTGGTGAACCGAGACCCCAAGAACATTAACGAGGACATAGTCAAGGT 72552291 15825 NM_015141.3(GPD1L):c.839C>T (p.Ala280Val) GPD1L Aug 17, 2017 MedGen:C2673193,OMIM:611777;MedGen:CN230736;Human Phenotype Ontology:HP:0001522,MedGen:C1844947;MedGen:CN517202 Brugada syndrome 2;Cardiovascular phenotype;Death in infancy;not provided germline;unknown 3 32159096 GGCGGAACCGCAGGGTGGCCGAGGCCTTCGCCAGAACTGGGAAGGTAGCCCCTCACCTGCT 121918716 27522 NM_000359.2(TGM1):c.424C>T (p.Arg142Cys) TGM1 Sep 01, 1997 MedGen:C3536797,OMIM:242300 Autosomal recessive congenital ichthyosis 1 germline 14 24261779 GACGAGTATGAGTACGACGAGCTGATAGTGCGCCGCGGGCAGCCTTTCCATATGCTCCTCC 796053367 202311 NM_003165.3(STXBP1):c.1216C>T (p.Arg406Cys) STXBP1 Nov 16, 2016 Human Phenotype Ontology:HP:0200134,MedGen:C0543888;MedGen:CN517202 Epileptic encephalopathy;not provided de novo;germline 9 127675909 GATGCCAATGTCAGCACTTATGACAAAATCCGCATCATCCTTCTCTACATCTTTTTGAAGA 104894294 23093 NM_005055.4(RAPSN):c.490C>T (p.Arg164Cys) RAPSN May 05, 2015 MedGen:C4225367,OMIM:616326;Human Phenotype Ontology:HP:0003198,MedGen:C0026848 Myasthenic syndrome, congenital, 11, associated with acetylcholine receptor deficiency;Myopathy germline;unknown 11 47447853 CACAACAATGATGACGCCATGCTCGAGTGCCGCGTGTGCTGCAGCCTGGGCAGCTTCTATG 121918521 25840 NM_005765.2(ATP6AP2):c.321C>T (p.Asp107=) ATP6AP2 Apr 15, 2005 MedGen:C1845543,OMIM:300423,Orphanet:ORPHA93952 Mental retardation, X-linked, syndromic, Hedera type germline X 40597269 TAAATTTCAGGCAGTTCCTTTTAGTCTTGACAGTGTTGCAAATTCCATTCACTCCTTATTT 312262825 49534 NM_003611.2(OFD1):c.337C>T (p.Gln113Ter) OFD1 Feb 28, 2013 MedGen:C1510460,OMIM:311200,Orphanet:ORPHA2750,SNOMED CT:52868006 Oral-facial-digital syndrome not provided X 13738870 CTTAAGGTATTTACTATGCAGGATCTATTACAACTCATTAAAATCAACCCTACTTCCAGTC 137852970 19576 NM_032667.6(BSCL2):c.412C>T (p.Arg138Ter) BSCL2 Dec 08, 2016 MedGen:C1720863,OMIM:269700 Congenital generalized lipodystrophy type 2 germline 11 62694594 GTCACCATTTCCTGCTACACCAGAGGTGGCCGAATCATCTCCACTTCTTCGCGTTCGGTAA -1 445739 NM_000267.3(NF1):c.3376C>T (p.Gln1126Ter) NF1 Sep 06, 2017 MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003;MedGen:CN517202 Neurofibromatosis, type 1;not provided germline 17 31232761 GACTGCAGTGAAGTTGAAGATGAAAGTGCGCAAACAGGTGGCAGGAAACGTGGCATGTCTC 104893981 17496 NM_000434.3(NEU1):c.893C>T (p.Ala298Val) NEU1 Jun 14, 2016 MedGen:C0268226,OMIM:256550 Sialidosis, type II germline 6 31860170 ACTGCCGAATTGTCCTCCGCAGCTATGATGCCTGTGATACACTAAGGCCCCGTGATGTGAC 587777071 94431 NM_032229.2(SLITRK6):c.541C>T (p.Arg181Ter) SLITRK6 Nov 24, 2014 MedGen:C1857342,OMIM:221200 Deafness and myopia germline 13 85795968 GCTATTGAGAGTCTTCCTCCAAACATCTTCCGATTTGTTCCTTTAACCCATCTAGATCTTC 886041831 264848 NM_004247.3(EFTUD2):c.1669C>T (p.Gln557Ter) EFTUD2 Jun 27, 2016 MedGen:CN517202 not provided germline 17 44860482 GGCAACTGGGTTCTGATTGAAGGTGTTGATCAACCAATTGTGAAGACAGCAACCATAACCG 121908910 21395 NM_002977.3(SCN9A):c.2986C>T (p.Arg996Cys) SCN9A Mar 09, 2017 MedGen:C2751777,OMIM:613863;MedGen:C2752089,OMIM:201300;MedGen:C1833661,OMIM:167400,Orphanet:ORPHA46348 Generalized epilepsy with febrile seizures plus, type 7;Hereditary sensory and autonomic neuropathy type IIA;Paroxysmal extreme pain disorder germline 2 166272731 AAGGGAATAAATTATGTGAAACAAACCTTACGTGAATTTATTCTAAAAGCATTTTCCAAAA 886040480 261191 NM_000059.3(BRCA2):c.3523C>T (p.Gln1175Ter) BRCA2 May 16, 2017 MedGen:C2675520,OMIM:612555;MedGen:CN517202 Breast-ovarian cancer, familial 2;not provided germline 13 32337878 CATGTCATAATGAATGCCCCATCGATTGGTCAGGTAGACAGCAGCAAGCAATTTGAAGGTA -1 457761 NM_172218.2(SPAG1):c.1156C>T (p.Gln386Ter) SPAG1 Apr 02, 2017 MedGen:C3809706,OMIM:615505 Ciliary dyskinesia, primary, 28 germline 8 100213149 GCCGCCCAGCCGTGCGTCATGGGCAACATCCAGAAGAAGCTGACTGGCAAAGCCGAAGGCG 180177279 200564 NM_000030.2(AGXT):c.844C>T (p.Gln282Ter) AGXT Nov 27, 2014 MedGen:C0268164,OMIM:259900,Orphanet:ORPHA93598,SNOMED CT:65520001 Primary hyperoxaluria, type I germline 2 240876002 CTGAGAGAGAGCCTGGCCCTCATTGCGGAACAGGTGCATGGGCTGCACTCCACAGGAGGAG 104894102 33303 NM_000476.2(AK1):c.319C>T (p.Arg107Ter) AK1 Apr 01, 1999 MedGen:C2675459,OMIM:612631,Orphanet:ORPHA86817 Adenylate kinase deficiency, hemolytic anemia due to germline 9 127871828 CGGGAGGTGCAGCAAGGAGAAGAGTTTGAGCGACGGGTAAGGCACTGACCCAAGTGGGGAT -1 481174 NM_000660.6(TGFB1):c.328C>T (p.Arg110Cys) TGFB1 Jan 01, 2017 Human Phenotype Ontology:HP:0001298,MedGen:C1963101;MedGen:CN201623,Orphanet:ORPHA238569 Encephalopathy;Immune dysregulation-inflammatory bowel disease-arthritis-recurrent infections syndrome germline 19 41352717 GAGGCCGACTACTACGCCAAGGAGGTCACCCGCGTGCTAATGGTGGAAACCCACAACGGTG 886041738 264255 NM_005654.5(NR2F1):c.424C>T (p.Arg142Cys) NR2F1 May 02, 2016 MedGen:CN517202 not provided germline 5 93585447 CAGCACCACCGCAACCAGTGCCAATACTGCCGCCTCAAGAAGTGCCTCAAAGTGGGCATGA 746315830 259743 NM_003494.3(DYSF):c.331C>T (p.Gln111Ter) DYSF Nov 04, 2015 MedGen:C1850889,OMIM:253601,Orphanet:ORPHA268;MedGen:C1850808,OMIM:254130,Orphanet:ORPHA45448;MedGen:C1847532,OMIM:606768,Orphanet:ORPHA178400;MedGen:CN517202 Limb-girdle muscular dystrophy, type 2B;Miyoshi muscular dystrophy 1;Myopathy, distal, with anterior tibial onset;not provided germline 2 71503308 TTCAATGCCCCCCTGCTGGACACCAAGAAGCAGCCCACAGGGGTAAGTGCCCATCAGCCTC 121434244 18376 NM_000348.3(SRD5A2):c.736C>T (p.Arg246Trp) SRD5A2 May 01, 1996 MedGen:C0268297,OMIM:264600,Orphanet:ORPHA753,SNOMED CT:57514000 3-Oxo-5 alpha-steroid delta 4-dehydrogenase deficiency germline 2 31526225 CTCAAGATGTTTGAGGACTACCCCAAATCTCGGAAAGCCCTTATTCCATTCATCTTTTAAA 121907900 18526 NM_024426.4(WT1):c.1384C>T (p.Arg462Trp) WT1 Jul 06, 2017 MedGen:C0268747,OMIM:256370,SNOMED CT:111406002,SNOMED CT:236383002;MedGen:C0950121,OMIM:194080,Orphanet:ORPHA220,SNOMED CT:236385009;MedGen:C0950121,OMIM:194080,Orphanet:ORPHA220,SNOMED CT:236385009;MedGen:C0950122,OMIM:136680,Orphanet:ORPHA347,SNOMED CT:445431000;MedGen:C1837026,OMIM:608978,Orphanet:ORPHA3097;MedGen:CN033288,OMIM:194070;MedGen:CN517202 Diffuse mesangial sclerosis;Drash syndrome;Drash syndrome;Frasier syndrome;Meacham syndrome;Wilms tumor 1;not provided germline 11 32392020 CAGTGTAAAACTTGTCAGCGAAAGTTCTCCCGGTCCGACCACCTGAAGACCCACACCAGGA 121434508 15449 NM_032273.3(TMEM126A):c.163C>T (p.Arg55Ter) TMEM126A Jan 01, 2012 MedGen:C2751812,OMIM:612989,Orphanet:ORPHA227976 Optic atrophy 7 germline 11 85654139 CTTTGTGGCCTCATAGCAAACAGTCTTTTTCGACGCATCTTGAATGTGACAAAGGCTCGCA 879253888 244362 NM_004321.7(KIF1A):c.760C>T (p.Arg254Trp) KIF1A Oct 04, 2017 MedGen:CN517202 not provided germline 2 240783777 ATCAGCCTGGTGGACCTGGCTGGGAGCGAGCGGGCTGACTCCACGGGAGCCAAGGGCACGC -1 482111 NM_013275.5(ANKRD11):c.4087C>T (p.Arg1363Ter) ANKRD11 Dec 04, 2017 MedGen:CN517202 not provided germline 16 89282455 TCCTCATCTTCATCCAAGAAGAGCCACGACCGAGAGCGAGCCAAGAAAGAGAAGGCCGAGA 757548934 487063 NM_172250.2(MMAA):c.742C>T (p.Gln248Ter) MMAA Dec 30, 2016 Human Phenotype Ontology:HP:0002912,MedGen:C0268583,SNOMED CT:42393006 Methylmalonic acidemia germline 4 145651070 TAGTTGTGATTTACAATTTCAGGTGTGGGTCAGTCGGAGTTTGCTGTTGCTGACATGGTTG 587779318 95030 NM_000179.2(MSH6):c.694C>T (p.Gln232Ter) MSH6 Jun 09, 2016 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:CN517202 Lynch syndrome;not provided germline 2 47798677 GATAATGAAATTGAGAGTGAAGAGGAAGTACAGCCTAAGACACAAGGATCTAGGCGAAGTA -1 431407 NM_012478.3(WBP2):c.671C>T (p.Ala224Val) WBP2 Aug 24, 2017 MedGen:CN417138,OMIM:617639 DEAFNESS, AUTOSOMAL RECESSIVE 107 germline 17 75846969 TGTTTGCTCTCACAGCCGAAGCCAAGGCCGCAGAAGCAGCCGCCAGCGCCTATTACAACCC 104894414 20582 NM_001110219.2(GJB6):c.14C>T (p.Thr5Met) GJB6 Dec 22, 2016 MedGen:C2675237,OMIM:612643 Deafness, autosomal dominant 3b germline 13 20223467 AGGGATAAACCAGCGCAATGGATTGGGGGACGCTGCACACTTTCATCGGGGGTGTCAACAA 730880257 178798 NM_005886.2(KATNB1):c.1604C>T (p.Ser535Leu) KATNB1 Feb 05, 2015 MedGen:C4015525,OMIM:616212 Lissencephaly 6, with microcephaly germline 16 57755878 TGGACTCCGCTGTGGCCATCAACGACCTGTCGGTGGTGGTGGACCTCCTGAACATCGTCAA 1057519725 362841 NM_004985.4(KRAS):c.437C>T (p.Ala146Val) KRAS Mar 10, 2016 MeSH:D015179,MedGen:CN236642;Human Phenotype Ontology:HP:0100031,MeSH:D013964,MedGen:C0040136,Orphanet:ORPHA100087;Human Phenotype Ontology:HP:0030358,MeSH:D002289,MedGen:C0007131,SNOMED CT:254637007 Colorectal Neoplasms;Neoplasm of the thyroid gland;Non-small cell lung cancer somatic 12 25225627 GTTATGGAATTCCTTTTATTGAAACATCAGCAAAGACAAGACAGGTAAGTAACACTGAAAT 1060503386 395450 NM_006772.2(SYNGAP1):c.1861C>T (p.Arg621Ter) SYNGAP1 Nov 27, 2016 MedGen:C2675473,OMIM:612621 Mental retardation, autosomal dominant 5 germline 6 33440913 ATGCAGGAGTACCCAGATGAGCAGACCTCACGAACCCTCACCCTCATTGCCAAGGTCATCC 757577162 430497 NM_006031.5(PCNT):c.5992C>T (p.Gln1998Ter) PCNT Aug 30, 2016 MedGen:C0432246,OMIM:210720,Orphanet:ORPHA2637 Microcephalic osteodysplastic primordial dwarfism type 2 germline 21 46412065 GCTGCTTTGGAGCCGGTTGTCCCTGACCCACAGGTGGGCTCCCCCCGCGGGCCATGGCAGG 863225366 214666 NM_000038.5(APC):c.541C>T (p.Gln181Ter) APC Oct 12, 2016 MedGen:CN517202 not provided germline;unknown 5 112780799 TTTTATTATTTGTGGTTTTAGTTTTCCTTACAAACAGATATGACCAGAAGGCAATTGGAAT 397515992 51839 NM_000256.3(MYBPC3):c.2905C>T (p.Gln969Ter) MYBPC3 Jun 15, 2017 MedGen:C3495498,OMIM:192600;Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Familial hypertrophic cardiomyopathy 1;Hypertrophic cardiomyopathy;Primary familial hypertrophic cardiomyopathy;not provided germline 11 47335042 ACGGAGCCGGTGACAGTGCAGGAGATCCTGCGTGAGTGCCCCTTTGTGCAGTCACAAGACC -1 440709 NM_014946.3(SPAST):c.1196C>T (p.Ser399Leu) SPAST Jun 10, 2014 MedGen:CN517202 not provided germline 2 32128430 TTTTAAAGGCTAAAGCAGTAGCTGCAGAATCGAATGCAACCTTCTTTAATATAAGTGCTGC 121912501 29499 NM_002310.5(LIFR):c.1789C>T (p.Arg597Ter) LIFR Feb 01, 2004 MedGen:C0796176,OMIM:601559,Orphanet:ORPHA3206 Stuve-Wiedemann syndrome germline 5 38496478 ATCCCTGATCCTCAGCACAAAGCAGAGATACGACTTGATAAGAATGACTACATCATCAGCG 761820222 259631 NM_020699.3(GATAD2B):c.1432C>T (p.Arg478Ter) GATAD2B Sep 29, 2017 MedGen:C3554448,OMIM:615074,Orphanet:ORPHA363686;MedGen:CN517202 Mental retardation, autosomal dominant 18;not provided de novo;germline 1 153812120 TGTGATGACTCCCAACAGGAAATTGAACAGCGATTACAGCAGCAGGCAGCCCTCTCCCCCA 398123981 100558 NM_004006.2(DMD):c.5287C>T (p.Arg1763Ter) DMD Jan 22, 2014 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009;MedGen:C3668940,OMIM:302045;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Becker muscular dystrophy;Dilated cardiomyopathy 3B;Duchenne muscular dystrophy germline X 32362826 GTAGAGCCCCAAATCTCAGAGCTCAACCATCGATTTGCAGCCATTTCACACAGAATTAAGA 111033590 20205 NM_001184985.1(WNK1):c.3046C>T (p.Gln1016Ter) WNK1 Nov 23, 2010 MedGen:C2752089,OMIM:201300 Hereditary sensory and autonomic neuropathy type IIA germline 12 868772 CCTCAATCAGTTGGATTACATGGCTACTTGCAGCCTGTGACTGAAGAAAAGCATAATTACC 869025619 224895 NM_000551.3(VHL):c.217C>T (p.Gln73Ter) VHL Feb 26, 2016 MedGen:C0019562,OMIM:193300,Orphanet:ORPHA892,SNOMED CT:46659004 Von Hippel-Lindau syndrome germline 3 10142064 CTGCGCTCGGTGAACTCGCGCGAGCCCTCCCAGGTCATCTTCTGCAATCGCAGTCCGCGCG 1064794019 406763 NM_001130105.1(COL4A3BP):c.779C>T (p.Ser260Leu) COL4A3BP Sep 20, 2017 MedGen:CN517202 not provided germline 5 75426432 GATCTGAATCCAGCTTGCGTCGACATGGCTCAATGGTGTCCCTGGTGTCTGGAGCAAGTGG 397514749 75333 NM_006946.3(SPTBN2):c.1438C>T (p.Arg480Trp) SPTBN2 Oct 01, 2013 MedGen:C0752123,OMIM:600224,Orphanet:ORPHA98766 Spinocerebellar ataxia 5 germline 11 66707731 ATTGAGACGGACATCGTGGCCTACAGCGGCCGGGTGCAGGCAGTGGACGCCGTGGCTGCAG 121908156 19704 NM_001033855.2(DCLRE1C):c.241C>T (p.Arg81Ter) DCLRE1C Oct 06, 2016 MedGen:C1865370,OMIM:602450;MedGen:CN517202 Severe combined immunodeficiency with sensitivity to ionizing radiation;not provided germline 10 14945110 ACGAGCCCGAAATACAGATTTTGGAAGAAACGAATTGTAAGTTTTATTTTTTTAATAACTT 121918064 15113 NM_000374.4(UROD):c.583C>T (p.Leu195Phe) UROD Nov 01, 1998 MedGen:C0268323,OMIM:176100,SNOMED CT:59229005 Familial porphyria cutanea tarda germline 1 45014017 CCTCAGGCTAGTCACCAGCTGCTTCGCATCCTCACTGATGCTCTGGTCCCATATCTGGTAG 587783440 168609 NM_017780.3(CHD7):c.4318C>T (p.Gln1440Ter) CHD7 Feb 08, 2013 MedGen:C0265354,OMIM:214800,Orphanet:ORPHA138,SNOMED CT:47535005 CHARGE association germline 8 60837800 TTGAAACTGGGCCTGGATAAAGCTGTGCTACAGTCTATGAGTGGAAGAGAAAATGCTACCA 113994141 34073 NM_000920.3(PC):c.184C>T (p.Arg62Cys) PC Jul 21, 2011 MedGen:C0034341,OMIM:266150,SNOMED CT:87694001 Pyruvate carboxylase deficiency not provided 11 66871824 GTGTTCCGGGCCTGCACGGAGCTGGGCATCCGCACCGTAGCCATCTACTCTGAGCAGGACA 267607199 15882 NM_153033.4(KCTD7):c.295C>T (p.Arg99Ter) KCTD7 Jun 01, 2007 MedGen:C2673257,OMIM:611726,Orphanet:ORPHA263516 Epilepsy, progressive myoclonic 3 germline 7 66633425 ACGGACTCCGAGGGCCGGTACTTCATCGACCGAGATGGCACACACTTTGGGTATGTCTCTC 57318642 29526 NM_170707.3(LMNA):c.1579C>T (p.Arg527Cys) LMNA Nov 16, 2015 MedGen:C0007959,Orphanet:ORPHA166,SNOMED CT:50548001;MedGen:C0033300,OMIM:176670,Orphanet:ORPHA740,SNOMED CT:238870004;MedGen:C0432291,OMIM:248370,Orphanet:ORPHA2457,SNOMED CT:109419009;MedGen:CN517202 Charcot-Marie-Tooth disease;Hutchinson-Gilford syndrome;Mandibuloacral dysostosis;not provided germline 1 156137203 CAGAACACCTGGGGCTGCGGGAACAGCCTGCGTACGGCTCTCATCAACTCCACTGGGGAAG -1 453972 NM_000038.5(APC):c.3880C>T (p.Gln1294Ter) APC Mar 23, 2017 MedGen:C2713442,OMIM:175100 Familial adenomatous polyposis 1 germline 5 112839474 GAAGATGAAATAGGATGTAATCAGACGACACAGGAAGCAGATTCTGCTAATACCCTGCAAA -1 434870 NM_024417.4(FDXR):c.1255C>T (p.Gln419Ter) FDXR Oct 12, 2017 MedGen:CN533577,OMIM:617717 AUDITORY NEUROPATHY AND OPTIC ATROPHY germline 17 74863166 ACAACCATGACTGACAGCTTCCTCACCGGCCAGATGCTGCTGCAGGACCTGAAGGCTGGGT 768448663 264151 NM_139248.2(LIPH):c.328C>T (p.Arg110Ter) LIPH Apr 29, 2016 MedGen:CN517202 not provided germline 3 185534854 GACATGAACGTAGTTGTTGTTGATTGGAATCGAGGAGCTACAACTTTAATATATACCCATG -1 486830 NC_000016.9:g.78078728C>T - Jun 25, 2017 MedGen:C0017921,OMIM:232300,Orphanet:ORPHA365,SNOMED CT:124462004,SNOMED CT:237967002 Glycogen storage disease, type II germline 16 78078728 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 121434296 18567 NM_005957.4(MTHFR):c.1129C>T (p.Arg377Cys) MTHFR Jun 01, 2007 MedGen:CN068661 Homocystinuria due to MTHFR deficiency germline 1 11794766 TGGGCCTCCAGACCAAAGAGTTACATCTACCGTACCCAGGAGTGGGACGAGTTCCCTAACG 55861249 18064 NM_000051.3(ATM):c.103C>T (p.Arg35Ter) ATM Jun 29, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Ataxia-telangiectasia syndrome;Ataxia-telangiectasia syndrome;Familial cancer of breast;Hereditary cancer-predisposing syndrome;not provided germline;unknown 11 108227806 AAAGAAGTTGAGAAATTTAAGCGCCTGATTCGAGATCCTGAAACAATTAAACATCTAGATC 137852393 25215 NM_000132.3(F8):c.493C>T (p.Pro165Ser) F8 Dec 01, 1993 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154993044 TATGTCTGGCAGGTCCTGAAAGAGAATGGTCCAATGGCCTCTGACCCACTGTGCCTTACCT 28929484 16795 NM_000251.2(MSH2):c.1915C>T (p.His639Tyr) MSH2 Apr 28, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:C2936783,OMIM:120435;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Lynch syndrome;Lynch syndrome I;not provided germline;unknown 2 47475180 CAAGGAAGAATTATATTAAAAGCATCCAGGCATGCTTGTGTTGAAGTTCAAGATGAAATTG 587780104 133350 NM_002878.3(RAD51D):c.694C>T (p.Arg232Ter) RAD51D Jul 11, 2017 MedGen:C3280345,OMIM:614291;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 4;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline;unknown 17 35103298 GCAGGCTTGGCCTTGATGATGCAGCTGGCCCGAGAGCTGAAGACCCTGGCCCGGGACCTTG 121918125 29065 NM_001059.2(TACR3):c.1057C>T (p.Pro353Ser) TACR3 Mar 01, 2009 MedGen:C3553844,OMIM:614840;MedGen:CN517202 Hypogonadotropic hypogonadism 11 with or without anosmia;not provided germline 4 103591515 TGGCTGGCAATGAGCTCAACCATGTACAATCCCATCATCTACTGCTGTCTGAATAAAAGGT 80357229 69904 NM_007294.3(BRCA1):c.4609C>T (p.Gln1537Ter) BRCA1 Nov 07, 2016 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline 17 43074397 GAGCTCATTAAGGTTGTTGATGTGGAGGAGCAACAGCTGGAAGAGTCTGGGCCACACGATT 387907136 40151 NM_177965.3(C8orf37):c.529C>T (p.Arg177Trp) C8orf37 Mar 28, 2017 MedGen:CN241836,OMIM:617406;MedGen:C3281045,OMIM:614500 Bardet-Biedl syndrome 21;Cone-rod dystrophy 16 not provided 8 95247712 AAAGCAAAGTTGATAAAGAAGAAAGGAACACGGGCATATGCCTGCCAGTGTAGCTGGAGAA 151306376 426451 NM_000444.5(PHEX):c.397C>T (p.Gln133Ter) PHEX Jun 14, 2017 MedGen:CN517202 not provided germline X 22076435 ATCAGTAGAAGGCGGGACACCGAAGCCATACAGAAAGCCAAAATCCTTTATTCATCCTGCA 199588440 49708 NM_025137.3(SPG11):c.1951C>T (p.Arg651Ter) SPG11 Mar 27, 2016 MedGen:C1858479,OMIM:604360,Orphanet:ORPHA2822 Spastic paraplegia 11, autosomal recessive germline 15 44628785 AACATTTTGACTAGCTACATTAATGAACTTCGAACCTTCATGATAAAGTTTCCTTGGAAGC 879255582 205710 NM_001830.3(CLCN4):c.1601C>T (p.Ser534Leu) CLCN4 Mar 22, 2016 MedGen:CN232948 CLCN4-related disorder de novo X 10213705 TTGCAGGTGGAGTTACCAGGATGACGGTGTCATTGGTGGTCATCATGTTTGAATTAACCGG 199422181 34470 NM_018136.4(ASPM):c.8668C>T (p.Gln2890Ter) ASPM Sep 01, 2009 MedGen:C1837501,OMIM:608716 Primary autosomal recessive microcephaly 5 not provided 1 197100583 TTACTATATAGAAAAGCAGCAGTGGTTTTACAAAATCACTACAGAGCATTTCTGTCTGCAA 730880631 179350 NM_000256.3(MYBPC3):c.1015C>T (p.Gln339Ter) MYBPC3 Dec 16, 2014 MedGen:CN517202 not provided germline 11 47346282 CCCCCATCTGAGTACGAGCGCATCGCCTTCCAGTACGGCGTCACTGACCTGCGCGGCATGC 1064794937 411369 NM_003688.3(CASK):c.763C>T (p.Arg255Cys) CASK Jul 18, 2017 MedGen:CN517202 not provided germline X 41660507 ATCTCTGAAAGTGCCAAAGACCTAGTACGTCGCATGCTGATGCTGGATCCAGCTGAAAGGA 587782885 152717 NM_001128425.1(MUTYH):c.739C>T (p.Arg247Ter) MUTYH May 09, 2017 MedGen:C0699790,OMIM:114500,SNOMED CT:269533000;MedGen:C0027672,SNOMED CT:699346009;MedGen:C1837991,OMIM:608456,Orphanet:ORPHA247798;MedGen:CN517202 Carcinoma of colon;Hereditary cancer-predisposing syndrome;MYH-associated polyposis;not provided germline 1 45332440 GGCAACGTAGCACGGGTGCTGTGCCGTGTCCGAGCCATTGGTGCTGATCCCAGCAGCACCC 575017579 421525 NM_001369.2(DNAH5):c.5647C>T (p.Arg1883Ter) DNAH5 Sep 23, 2015 MedGen:CN517202 not provided germline 5 13840968 GTCACCACGAGGGATCTGAGTTCCACGGAACGAGTGAAATACGAGACTCTGATTACTATTC 370499474 206618 NM_033409.3(SLC52A3):c.796C>T (p.Arg266Trp) SLC52A3 Aug 27, 2015 MedGen:CN029849,OMIM:211530;MedGen:CN517202 Brown-Vialetto-Van Laere syndrome 1;not provided germline 20 763775 CTCAATGACCAGGTCACCCTCCACTCCATCCGGCCGCGGGAAGAGAATGACTTGGGCCCTG 397507556 49465 NM_001232.3(CASQ2):c.97C>T (p.Arg33Ter) CASQ2 Mar 25, 2014 MedGen:C2677794,OMIM:611938;MedGen:CN517202 Ventricular tachycardia, catecholaminergic polymorphic, 2;not provided germline 1 115768445 CTTAATTTCCCCACATATGATGGGAAGGACCGAGTGGTAAGTCTTTCCGAGAAGAACTTCA 34208370 425331 NM_032409.2(PINK1):c.1474C>T (p.Arg492Ter) PINK1 Jun 05, 2017 MedGen:CN517202 not provided germline 1 20649217 GTGAGACAGTTGGTGAGGGCACTGCTCCAGCGAGAGGCCAGCAAGGTGAGGCTGTCCCCGG 774625619 368696 NM_001723.5(DST):c.4993C>T (p.Gln1665Ter) DST Dec 13, 2016 MedGen:CN517202 not provided germline 6 56619041 AAAAGTCAAAATTTGGTAAGTGAATTTAAGCAAAAGTGTGACCAACAGAACATTATCATCC 121913575 29338 NM_000426.3(LAMA2):c.4645C>T (p.Arg1549Ter) LAMA2 Oct 24, 2000 MedGen:C1842898 Congenital muscular dystrophy due to partial LAMA2 deficiency germline 6 129353285 TGTGACCCTGTCACAGGATTCTGCACGTGCCGACCTGGAGCCACGGGAAGGAAGTGTGACG 137852424 25271 NM_000132.3(F8):c.1804C>T (p.Arg602Ter) F8 Jan 01, 1995 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154953991 GTCATCCTGTTTTCTGTATTTGATGAGAACCGAAGCTGGTACCTCACAGAGAATATACAAC 121908261 28431 NM_000207.2(INS):c.163C>T (p.Arg55Cys) INS Apr 01, 2008 MedGen:C1852092,OMIM:125852 Diabetes mellitus, insulin-dependent, 2 germline 11 2160809 GAACGAGGCTTCTTCTACACACCCAAGACCCGCCGGGAGGCAGAGGACCTGCAGGGTGAGC 121909582 32107 NM_001734.3(C1S):c.1600C>T (p.Arg534Trp) C1S Jun 15, 2001 MedGen:C3151078,OMIM:613783,SNOMED CT:234598004 Complement component c1s deficiency germline 12 7070184 ACCAATTTTGATAATGACATTGCACTGGTGCGGCTGAAAGACCCAGTGAAAATGGGACCCA 575595017 479227 NM_032043.2(BRIP1):c.193C>T (p.Gln65Ter) BRIP1 Dec 19, 2016 MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009 Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome germline 17 61859808 GCCTTACTTTGTTCTGCTTTAGCATGGCAACAATCTCTTAGTGGTAAGTAGTTGCTTGATA 76436818 131930 NM_006397.2(RNASEH2A):c.322C>T (p.Arg108Trp) RNASEH2A Mar 13, 2014 MedGen:C1835912,OMIM:610333 Aicardi Goutieres syndrome 4 germline 19 12807328 CCAAACCTCATCTCTACCAGCATGCTTGGGCGGTGAGGGGTCCCCGGGAGGGGCAGCCAGC 121909487 22040 NM_002316.3(LMX1B):c.661C>T (p.Arg221Ter) LMX1B May 01, 1998 MedGen:C0027341,OMIM:161200,SNOMED CT:22199006 Nail-patella syndrome germline 9 126693243 GATGACGGGAAGGACCCGCGGAGGCCCAAGCGACCCCGGACCATCCTCACCACGCAGCAGC 63750563 94804 NM_000179.2(MSH6):c.3013C>T (p.Arg1005Ter) MSH6 Oct 02, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Lynch syndrome;not provided germline;unknown 2 47800996 GAGTTGAAATCTACCAAGAAGGGCTGTAAACGATACTGGACCAAAACTATTGAAAAGAAGT 116100695 16552 NM_000298.5(PKLR):c.1456C>T (p.Arg486Trp) PKLR Jan 27, 2016 MedGen:C1849472,OMIM:266200 Pyruvate kinase deficiency of red cells germline 1 155291918 GCCTCCTCCAGCTCAGCCCAGCTTCTGTCTCGGTACCGACCTCGGGCAGCAGTCATTGCTG 397516986 54177 NM_004572.3(PKP2):c.1132C>T (p.Gln378Ter) PKP2 Oct 18, 2017 MedGen:C0349788,Orphanet:ORPHA247,SNOMED CT:253528005,SNOMED CT:281170005;MedGen:CN517202 Arrhythmogenic right ventricular cardiomyopathy;not provided germline 12 32868965 TCCAGGATTTCTGCTGCAGCTACTTTCATACAGCACGAGTGCTTCCAGAAATCTGAAGCTC 797045659 207951 NM_003482.3(KMT2D):c.15079C>T (p.Arg5027Ter) KMT2D Feb 16, 2017 MedGen:CN030661,OMIM:147920;MedGen:CN517202 Kabuki syndrome 1;not provided germline 12 49026887 GGCACAGCCTTGCGACCTGACAAGGTACCGCGAGACATGCGTCGCTGCTGTTTCTGTCATG 137852835 16381 NM_025114.3(CEP290):c.613C>T (p.Arg205Ter) CEP290 Jul 01, 2007 MedGen:C1970161,OMIM:611134 Meckel syndrome type 4 germline 12 88130324 TTATCAAGAAGAGGGGAAGACAGTGACTACCGATCACAGTTGTCTAAAAAAAACTATGAGC 121917725 15254 NM_000285.3(PEPD):c.793C>T (p.Arg265Ter) PEPD Apr 06, 2015 MedGen:C0268532,OMIM:170100 Prolidase deficiency germline 19 33411697 CACTACGGACACGCCGGAGCTCCCAACGACCGAACGATCCAGAATGGGGATATGTGGTAAG 121912995 31881 NM_004415.3(DSP):c.1990C>T (p.Gln664Ter) DSP Feb 01, 2002 MedGen:C1843292,OMIM:607655,Orphanet:ORPHA293165 Skin fragility woolly hair syndrome germline 6 7571928 GTAATTGAAACCAACAGAGAAAATGACAAGCAAGAAACATGGATGCTGATGGAGCTGCAGA 104894018 29939 NM_005522.4(HOXA1):c.76C>T (p.Arg26Ter) HOXA1 May 15, 2008 MedGen:C1832215,OMIM:601536,Orphanet:ORPHA69739 Athabaskan brainstem dysgenesis germline 7 27095837 AGCAGTGGCGACTCGGGGACCTGCTCAGCCCGAGCCTACCCCTCGGACCATAGGATTACAA 137853329 26500 NM_003639.4(IKBKG):c.1207C>T (p.Gln403Ter) IKBKG Jun 01, 2002 MedGen:C1846006,OMIM:300291,Orphanet:ORPHA98813 Hypohidrotic ectodermal dysplasia with immune deficiency germline X 154564408 CCTGACTTCTGCTGTCCCAAGTGCCAGTATCAGGCCCCTGATATGGACACCCTGCAGATAC 587777468 263168 NM_006087.3(TUBB4A):c.533C>T (p.Thr178Met) TUBB4A Jul 05, 2016 MedGen:C2676244,OMIM:612438,Orphanet:ORPHA139441 Leukodystrophy, hypomyelinating, 6 germline 19 6495966 GCGTGGTGCCCTCGCCCAAAGTGTCAGACACGGTGGTGGAGCCCTACAACGCCACGCTGTC 111033656 36470 NM_000155.3(GALT):c.197C>T (p.Pro66Leu) GALT Dec 04, 2012 MedGen:C0268151,OMIM:230400,Orphanet:ORPHA79239,SNOMED CT:124354006 Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase not provided 9 34647203 AAGTGGAGCCCCAGCTTCTGAAGACAGTGCCCCGCCATGACCCTCTCAACCCTCTGTGTCC 121917812 24586 NM_201590.2(CACNB2):c.1442C>T (p.Ser481Leu) CACNB2 Apr 10, 2014 MedGen:C2678477,OMIM:611876 Brugada syndrome 4 germline 10 18539345 TCAAGAAATCCCAGCACCGCTCTTCCTCCTCAGCCCCACACCACAACCATCGCAGTGGGAC 149645175 48773 NM_002335.3(LRP5):c.4600C>T (p.Arg1534Ter) LRP5 Mar 14, 2013 MedGen:C0432252,OMIM:259770,Orphanet:ORPHA2788,SNOMED CT:254112001 Osteoporosis with pseudoglioma germline 11 68448822 GTGTGTGTCCCTTTCAGGCCCTACATCATTCGAGGAATGGCGCCCCCGACGACGCCCTGCA 796052248 203860 NM_000026.3(ADSL):c.1276C>T (p.Arg426Cys) ADSL Jul 19, 2012 MedGen:CN517202 not provided germline 22 40364964 CAGGAAGGGGGTGACAATGACCTCATAGAGCGTATCCAGGTTGATGCCTACTTCAGTCCCA 727503011 176330 NM_001399.4(EDA):c.991C>T (p.Gln331Ter) EDA May 05, 2014 Human Phenotype Ontology:HP:0007607,MedGen:C1706004,Orphanet:ORPHA238468 Hypohidrotic ectodermal dysplasia germline X 70035424 GAGGTGGTGGTGGATGAGAAGCCCTTCCTGCAGTGCACACGCAGCATCGAGACGGGCAAGA 587784566 168023 NM_014795.3(ZEB2):c.2761C>T (p.Arg921Ter) ZEB2 Oct 24, 2017 MedGen:C1856113,OMIM:235730,Orphanet:ORPHA2152;MedGen:CN517202 Mowat-Wilson syndrome;not provided de novo;germline 2 144398426 CCACCAGTCCAGACCAGTATTCCTGGGCTACGACCATACCCAGGACTGGATCAGATGAGCT -1 468793 NM_000540.2(RYR1):c.14833C>T (p.Arg4945Ter) RYR1 Jul 11, 2017 MedGen:CN239331 RYR1-Related Disorders germline 19 38585967 GGTCTGATCATCGACGCTTTTGGTGAGCTCCGAGACCAACAAGAGCAAGTGAAGGAGGATA 137852746 23841 NM_001204.6(BMPR2):c.1471C>T (p.Arg491Trp) BMPR2 Jul 11, 2016 MedGen:C0152171,OMIM:178600,SNOMED CT:26174007;MedGen:CN517202 Primary pulmonary hypertension;not provided germline 2 202552773 GAAGACTGTTGGGACCAGGATGCAGAGGCTCGGCTTACTGCACAGTGTGCTGAGGAAAGGA 312262810 49488 NM_003611.2(OFD1):c.121C>T (p.Arg41Ter) OFD1 Feb 28, 2013 MedGen:C1510460,OMIM:311200,Orphanet:ORPHA2750,SNOMED CT:52868006 Oral-facial-digital syndrome not provided X 13736487 TTTGTTTTTATTTTATGCTAGACACAACTTCGAAACCAGCTAATTCATGAGTTGATGCACC 1060502661 404261 NM_004006.2(DMD):c.2077C>T (p.Gln693Ter) DMD Sep 08, 2016 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Duchenne muscular dystrophy germline X 32545250 GAAACAGTAACTACGGTGACCACAAGGGAACAGATCCTGGTAAAGCATGCTCAAGAGGAAC 587783029 166240 NM_000038.5(APC):c.3286C>T (p.Gln1096Ter) APC May 09, 2017 MedGen:C2713442,OMIM:175100;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Familial adenomatous polyposis 1;Hereditary cancer-predisposing syndrome;not provided germline;unknown 5 112838880 CACCTCAAGTTCCAACCACATTTTGGACAGCAGGAATGTGTTTCTCCATACAGGTCACGGG 761071115 486618 NM_004737.5(LARGE1):c.283C>T (p.Arg95Ter) LARGE1 Aug 07, 2017 MedGen:C3150414,OMIM:613154 Congenital muscular dystrophy-dystroglycanopathy with brain and eye anomalies, type A6 inherited 22 33650492 CTGGCCCAGGGCCGAGCCCCATCCCATCGCCGAGGCAACCACTCCAAGACCTACTCCATGG 45438205 58932 NM_000548.4(TSC2):c.3598C>T (p.Arg1200Trp) TSC2 Sep 14, 2017 MedGen:C1860707,OMIM:613254;MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000;MedGen:CN517202 Tuberous sclerosis 2;Tuberous sclerosis syndrome;not provided germline 16 2080365 CTGACCCAGGGCTGGGCGGAGATCCTGGTCCGGAGGCCCACAGGTACTGGGCGGGGCTGGC 137929776 421165 NM_021222.2(PRUNE1):c.196C>T (p.Arg66Ter) PRUNE1 Jun 01, 2017 MedGen:CN517202 not provided germline 1 151018530 TTAAATATAAAACGTTCTGAACTACCTCTGCGAGGTGACATTGTCTTCTTTCTTCAGAAGG 121913065 31564 NM_000129.3(F13A1):c.514C>T (p.Arg172Ter) F13A1 Dec 01, 1993 Human Phenotype Ontology:HP:0040233,MedGen:C2750514,OMIM:613225 Factor xiii, a subunit, deficiency of germline 6 6266615 GTTGCTGTCTGGACTCCCTATGGCGTACTTCGAACCAGTCGAAACCCAGAAACAGACACGT 132630295 26137 NM_001128834.2(PLP1):c.409C>T (p.Arg137Trp) PLP1 Apr 17, 2007 MedGen:C1839264,OMIM:312920,Orphanet:ORPHA99015 Spastic paraplegia 2 germline X 103786682 AGAGGCCAACATCAAGCTCATTCTTTGGAGCGGGTGTGTCATTGTTTGGGAAAATGGCTAG 267608682 40106 NM_007055.3(POLR3A):c.3013C>T (p.Arg1005Cys) POLR3A Aug 02, 2012 MedGen:C1843200,OMIM:607694 Hypomyelinating leukodystrophy 7 germline 10 77985961 TCCCAGCCCCGTGTGCTGTACCAGCTGGACCGCATCACCCCCACCCAAGTAGAAAAGTTTC 61755792 28209 NM_000322.4(PRPH2):c.514C>T (p.Arg172Trp) PRPH2 Jan 01, 1998 MedGen:C2751290,OMIM:613105;MedGen:CN517202 Choroidal dystrophy, central areolar 2;not provided germline 6 42721821 GAGTTCAAATGCTGCGGCAACAACGGTTTTCGGGACTGGTTTGAGATTCAGTGGATCAGCA 72554307 26052 NM_000531.5(OTC):c.118C>T (p.Arg40Cys) OTC Feb 01, 2001 MedGen:C0268542,OMIM:311250,Orphanet:ORPHA664,SNOMED CT:80908008;MedGen:CN517202 Ornithine carbamoyltransferase deficiency;not provided germline;unknown X 38367331 CCACTACAAAATAAAGTGCAGCTGAAGGGCCGTGACCTTCTCACTCTAAAAAACTTTACCG 749908889 214554 NM_000532.4(PCCB):c.1540C>T (p.Arg514Ter) PCCB - Human Phenotype Ontology:HP:0003353,MedGen:C0268579,OMIM:606054,Orphanet:ORPHA35 Propionic acidemia germline 3 136329946 GACATCATCCAACCTTCTTCCACACGTGCCCGAATCTGCTGTGACCTGGATGTCTTGGCCA -1 428701 NM_152743.3(BRAT1):c.964C>T (p.Gln322Ter) BRAT1 Jan 14, 2016 MedGen:C3281029,OMIM:614498,Orphanet:ORPHA435845 Rigidity and multifocal seizure syndrome, lethal neonatal germline 7 2542171 CTGAGGACCCAGGCCTTCCAGGTCCTTCTCCAGCCCCTGGCCTGTGTCCTGAAGGCCACGG 121908462 20868 NM_005682.6(ADGRG1):c.112C>T (p.Arg38Trp) ADGRG1 Mar 26, 2004 MedGen:C1847352,OMIM:606854,Orphanet:ORPHA101070 Polymicrogyria, bilateral frontoparietal germline 16 57651247 CACAGGGAAGACTTTCGCTTCTGCAGCCAGCGGAACCAGACACACAGGAGCAGCCTCCACT 751000085 194371 NM_003000.2(SDHB):c.343C>T (p.Arg115Ter) SDHB Jul 11, 2017 MedGen:C1708353,Orphanet:ORPHA29072;MedGen:C1861848,OMIM:115310;Human Phenotype Ontology:HP:0002666,MedGen:C0031511,OMIM:171300 Hereditary Paraganglioma-Pheochromocytoma Syndromes;Paragangliomas 4;Pheochromocytoma germline 1 17028680 ATCAATGGAGGCAACACTCTAGCTTGCACCCGAAGGATTGACACCAACCTCAATAAGGTCT 397509283 70244 NM_007294.3(BRCA1):c.5431C>T (p.Gln1811Ter) BRCA1 Nov 01, 2017 MedGen:C2676676,OMIM:604370;MedGen:CN517202 Breast-ovarian cancer, familial 1;not provided germline 17 43047679 ATCCAGGGTGTCCACCCAATTGTGGTTGTGCAGCCAGATGCCTGGACAGAGGACAATGGCT 397515434 48590 NM_006147.3(IRF6):c.145C>T (p.Gln49Ter) IRF6 Nov 01, 2009 MedGen:C0175697,OMIM:119300,SNOMED CT:79261008 Van der Woude syndrome germline 1 209801269 CCCTGGAAACATGCCACCCGGCATAGCCCTCAACAAGAAGAGGAAAATACCATTTTTAAGG 80357011 69802 NM_007294.3(BRCA1):c.4186C>T (p.Gln1396Ter) BRCA1 Oct 02, 2015 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome germline 17 43082575 TTTTCTTGGTGCCATTTATCGTTTTTGAAGCAGAGGGATACCATGCAACATAACCTGATAA 1043384862 359980 NM_001080463.1(DYNC2H1):c.4625C>T (p.Ala1542Val) DYNC2H1 Jun 01, 2017 MedGen:CN674505;MedGen:C2751311,OMIM:613091,SNOMED CT:254051008;MedGen:CN517202 Short-rib polydactyly syndrome type III;Short-rib thoracic dysplasia 3 with or without polydactyly;not provided germline;paternal 11 103165911 TTCTCTTTATTCAATAGATTTTATGCTTGGCGGAGCAGATTAAATTCACTGAAGATGTAGA 886044843 269807 NM_000169.2(GLA):c.422C>T (p.Thr141Ile) GLA Dec 23, 2015 Human Phenotype Ontology:HP:0001071,MedGen:C0002986,OMIM:301500,Orphanet:ORPHA324,SNOMED CT:16652001 Fabry disease germline X 101401757 TAGGGATTTATGCAGATGTTGGAAATAAAACCTGCGCAGGCTTCCCTGGGAGTTTTGGATA -1 441347 NM_033305.2(VPS13A):c.4411C>T (p.Arg1471Ter) VPS13A Feb 16, 2017 MedGen:CN517202 not provided germline 9 77314663 AAAAGACCTCATGTCAAGAAAGCAACTCCTCGGTATGTATTGTAATGATGTTCTAAGGTTT 398123013 49925 NM_020944.2(GBA2):c.700C>T (p.Arg234Ter) GBA2 Apr 04, 2013 MedGen:C2828721,OMIM:614409,Orphanet:ORPHA320391 Spastic paraplegia 46, autosomal recessive germline 9 35741758 TACTTTGCTTTCTACCATGCCCTCTATCCCCGAGCCTGGACTGTCTATCAGCTTCCTGGCC 121918225 16265 NM_006363.5(SEC23B):c.970C>T (p.Arg324Ter) SEC23B Aug 01, 2009 MedGen:C1306589,OMIM:224100,Orphanet:ORPHA98873,SNOMED CT:68870007 Congenital dyserythropoietic anemia, type II germline 20 18526508 TCTTGGCATGATATTGAGAAAGATAATGCACGATTCATGAAAAAGGCAACCAAGGTAGGTG 193922287 44869 NM_000162.3(GCK):c.175C>T (p.Pro59Ser) GCK Jun 27, 2017 MedGen:C1841962,OMIM:125851;MedGen:CN517202 Maturity-onset diabetes of the young, type 2;not provided germline 7 44153334 ACCCATGAAGAGGCCAGTGTGAAGATGCTGCCCACCTACGTGCGCTCCACCCCAGAAGGCT 199473225 78737 NM_198056.2(SCN5A):c.3995C>T (p.Pro1332Leu) SCN5A Jun 11, 2016 MedGen:C1142166,Orphanet:ORPHA130,SNOMED CT:418818005;MedGen:CN517202 Brugada syndrome;not provided germline 3 38560397 TGGTGGTCAATGCCCTGGTGGGCGCCATCCCGTCCATCATGAACGTCCTCCTCGTCTGCCT -1 451191 NM_000251.2(MSH2):c.2563C>T (p.Gln855Ter) MSH2 Apr 27, 2017 MedGen:C0009405,Orphanet:ORPHA443090 Hereditary nonpolyposis colon cancer germline 2 47480800 AAACAGAAAGCCCTGGAACTTGAGGAGTTTCAGTATATTGGAGAATCGCAAGGATATGATA 387906941 39539 NM_001127713.1(ATL1):c.1246C>T (p.Arg416Cys) ATL1 Jul 01, 2011 MedGen:C2931355,OMIM:182600,Orphanet:ORPHA100984 Spastic paraplegia 3 germline 14 50628157 AAGAAGATGGGTGGGGAAGAATTTAGCCGGCGTTACCTGCAGCAGTTGGAGAGTGAAATAG 199472795 67666 NM_000218.2(KCNQ1):c.1615C>T (p.Arg539Trp) KCNQ1 Jun 29, 2017 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MeSH:D008133,MedGen:C0023976,SNOMED CT:9651007;MedGen:CN517202 Congenital long QT syndrome;Long QT syndrome;not provided germline 11 2775984 CCGCAGCAAGCGCGGAAGCCTTACGATGTGCGGGACGTCATTGAGCAGTACTCGCAGGGCC 121908170 19687 NM_006492.2(ALX3):c.586C>T (p.Arg196Trp) ALX3 May 01, 2009 MedGen:C1876203,OMIM:136760 Frontonasal dysplasia 1 germline 1 110064595 CTGGCCCTGCGCACAGACCTGACTGAGGCCCGGGTACAGGTGAGGGCACTGCAAGGATGGG 185392267 434143 NM_174936.3(PCSK9):c.286C>T (p.Arg96Cys) PCSK9 - MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 1 55043921 ACCCACCTCTCGCAGTCAGAGCGCACTGCCCGCCGCCTGCAGGCCCAGGCTGCCCGCCGGG 128621194 26405 NM_000061.2(BTK):c.862C>T (p.Arg288Trp) BTK Jan 01, 1994 MedGen:C0221026,OMIM:300755,Orphanet:ORPHA47,SNOMED CT:65880007 X-linked agammaglobulinemia germline X 101359325 CTTCACAGGTGGTATTCCAAACACATGACTCGGAGTCAGGCTGAGCAACTGCTAAAGCAAG 879253751 243942 NM_000902.3(MME):c.661C>T (p.Gln221Ter) MME Jul 06, 2016 MedGen:C4015635,OMIM:617017 Charcot-Marie-Tooth disease, axonal, type 2T germline 3 155118752 TTCTTTTATGTATATTTTTTATAGATTGACCAACCTCGACTTGGCCTCCCTTCTAGAGATT 774277300 183503 NM_005591.3(MRE11):c.1726C>T (p.Arg576Ter) MRE11 Sep 30, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 11 94447276 ACCAACAAAGGAAGAGGCCGAGGAAGAGGTCGAAGAGGTGGAAGAGGGCAGAATTCAGCAT 866266558 359522 NM_017875.3(SLC25A38):c.166C>T (p.Gln56Ter) SLC25A38 Nov 16, 2016 MedGen:CN517202 not provided germline 3 39389591 CAACCTCTGGATCTCCTTAAAACACGCCTGCAAACCCTCCAGCCCTCAGATCATGGGTAGG -1 425531 NM_007289.2(MME):c.1564C>T (p.Gln522Ter) MME Jun 19, 2017 MedGen:CN517202 not provided germline 3 155148616 ATTCAAAATTTGAAATTCAGCCAAAGTAAACAACTGAAGAAGCTCCGAGAAAAGGTGGACA 368138001 102410 NM_153240.4(NPHP3):c.3373C>T (p.Arg1125Ter) NPHP3 Oct 21, 2013 MedGen:C1858392,OMIM:604387,SNOMED CT:444749006;MedGen:C1858392,OMIM:604387,SNOMED CT:444749006;MedGen:C2673883,OMIM:208540,Orphanet:ORPHA294415 Adolescent nephronophthisis;Adolescent nephronophthisis;Renal-hepatic-pancreatic dysplasia germline;inherited 3 132684751 TTTCTGAAGCGTTCCTTAGAAATGAGGGAGCGAGTTCTAGGACCAGATCACCCTGACTGTG 796053353 202287 NM_003165.3(STXBP1):c.416C>T (p.Pro139Leu) STXBP1 Jan 01, 2018 MedGen:C2677326,OMIM:612164;MedGen:CN517202 Early infantile epileptic encephalopathy 4;not provided de novo;germline 9 127661192 CTCTGACGGAAATCAATATTGCATTTCTCCCGTATGAATCCCAGGTGAGCCTGAGTAGGGG 878853258 39231 NM_001197181.1(TUBB3):c.689C>T (p.Ala230Val) TUBB3 Nov 15, 2010 MedGen:C3279670,OMIM:614039 Cortical dysplasia, complex, with other brain malformations 1 germline 16 89935356 AGATGTTCGATGCCAAGAACATGATGGCCGCCTGCGACCCGCGCCACGGCCGCTACCTGAC 104894055 23022 NM_000474.3(TWIST1):c.82C>T (p.Gln28Ter) TWIST1 May 01, 2002 MedGen:C1863370 Saethre-Chotzen syndrome with eyelid anomalies germline 7 19117240 AGCAACAGCGAGGAAGAGCCAGACCGGCAGCAGCCGCCGAGCGGCAAGCGCGGGGGACGCA 267608469 153285 NM_004992.3(MECP2):c.382C>T (p.Gln128Ter) MECP2 Sep 27, 2012 MedGen:C0035372,OMIM:312750,Orphanet:ORPHA778,SNOMED CT:68618008 Rett syndrome unknown X 154031446 TTGTGTCTTTCTGTTTGTCCCCACAGTCCCCAGGGAAAAGCCTTTCGCTCTAAAGTGGAGT 397516792 49214 NM_002755.3(MAP2K1):c.371C>T (p.Pro124Leu) MAP2K1 May 22, 2017 MedGen:C1275081,Orphanet:ORPHA1340,SNOMED CT:403770008;MeSH:D015179,MedGen:CN236642;Human Phenotype Ontology:HP:0002861,MeSH:D008545,MedGen:C0025202,SNOMED CT:2092003;MeSH:C562393,MedGen:C0151779,SNOMED CT:93655004;MedGen:C0153574,Orphanet:ORPHA213569;Human Phenotype Ontology:HP:0006740,MedGen:C0279680 Cardio-facio-cutaneous syndrome;Colorectal Neoplasms;Malignant melanoma;Malignant melanoma of skin;Malignant neoplasm of body of uterus;Transitional cell carcinoma of the bladder germline;somatic 15 66436825 AGCTGCAGGTTCTGCATGAGTGCAACTCTCCGTACATCGTGGGCTTCTATGGTGCGTTCTA 121912737 32838 NM_001681.3(ATP2A2):c.1805C>T (p.Pro602Leu) ATP2A2 Feb 01, 2003 MedGen:C0265971,OMIM:101900,Orphanet:ORPHA79151,SNOMED CT:400085009 Acrokeratosis verruciformis of Hopf germline 12 110340702 TCGTTGGCTGCGTGGGCATGCTGGATCCTCCGAGAATCGAGGTGGCCTCCTCCGTGAAGCT 63751048 34358 NM_014043.3(CHMP2B):c.556C>T (p.Arg186Ter) CHMP2B Oct 04, 2012 MedGen:C1833296,OMIM:600795;MedGen:CN517202 Frontotemporal Dementia, Chromosome 3-Linked;not provided not provided 3 87253736 ATATAGATGGCCAAAGCTCCATCAGCTGCTCGAAGCTTACCATCTGCCTCTACTTCAAAGG 397516828 125840 NM_002880.3(RAF1):c.782C>T (p.Pro261Leu) RAF1 Aug 01, 2017 MeSH:D009634,MedGen:C0028326,Orphanet:ORPHA648,SNOMED CT:205824006;MedGen:C1969057,OMIM:611553;MedGen:CN517202 Noonan syndrome;Noonan syndrome 5;not provided germline;somatic 3 12604188 TCTCCCAGAGGCAGAGGTCGACATCCACACCTAATGTCCACATGGTCAGCACCACCCTGCC 104894418 22711 NM_002312.3(LIG4):c.1738C>T (p.Arg580Ter) LIG4 Dec 01, 2001 MedGen:C1847827,OMIM:606593,Orphanet:ORPHA99812 Lig4 syndrome germline 13 108209531 TATAAAACTGGCTGCACCTTGCGTTTTCCACGAATTGAAAAGATAAGAGATGACAAGGAGT 775126020 182339 NM_000038.5(APC):c.994C>T (p.Arg332Ter) APC Jun 02, 2017 MedGen:CN240755;MedGen:C2713442,OMIM:175100;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Familial adenomatous polyposis;Familial adenomatous polyposis 1;Hereditary cancer-predisposing syndrome;not provided germline;unknown 5 112819026 CTTGGTACTCATGATAAGGATGATATGTCGCGAACTTTGCTAGCTATGTCTAGCTCCCAAG 398124202 187400 NM_005249.4(FOXG1):c.256C>T (p.Gln86Ter) FOXG1 Jan 01, 2018 MedGen:C3150705,OMIM:613454;MedGen:CN517202 Rett syndrome, congenital variant;not provided de novo;germline;unknown 14 28767535 CCGCCGCCGCCCCCGGCACCGCAGCCCCCCCAGACGCGGGGCGCCCCGGCCGCCGACGACG 201956469 414516 NM_017799.3(TMEM260):c.1393C>T (p.Gln465Ter) TMEM260 May 12, 2017 MedGen:CN243983,OMIM:617478 Structural heart defects and renal anomalies syndrome germline 14 56621697 GGGTTGAGGCCTGACATTTCATTAGTGGATCAGGAAGTAAGTATATGAAAAATATACTTAG 786201957 183231 NM_000051.3(ATM):c.3349C>T (p.Gln1117Ter) ATM May 04, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0027672,SNOMED CT:699346009 Ataxia-telangiectasia syndrome;Hereditary cancer-predisposing syndrome germline 11 108279555 TTACTGAAAGCACTTCCTTTGAAGCTTCAGCAAACAGCTTTTGAAAATGCATACTTGAAAG 11547328 31967 NM_000075.3(CDK4):c.70C>T (p.Arg24Cys) CDK4 Aug 15, 2017 Human Phenotype Ontology:HP:0030078,MeSH:C538231,MedGen:C0152013;MedGen:C1836892,OMIM:609048;MedGen:C0027672,SNOMED CT:699346009;MedGen:C1512419;MeSH:C562393,MedGen:C0151779,SNOMED CT:93655004;Human Phenotype Ontology:HP:0006775,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:ORPHA29073,SNOMED CT:109989006,SNOMED CT:55921005;MedGen:CN517202 Adenocarcinoma of lung;Cutaneous malignant melanoma 3;Hereditary cancer-predisposing syndrome;Hereditary cutaneous melanoma;Malignant melanoma of skin;Multiple myeloma;not provided germline;somatic;unknown 12 57751648 GTCGGTGCCTATGGGACAGTGTACAAGGCCCGTGATCCCCACAGTGGCCACTTTGTGGCCC 387907040 39829 NM_024306.4(FA2H):c.460C>T (p.Arg154Cys) FA2H Aug 18, 2015 MedGen:C3668943,OMIM:612319,Orphanet:ORPHA329308;MedGen:CN517202 Spastic paraplegia 35;not provided germline 16 74727290 TGGGTTCACCAGCCGGTGACCAGGCCCATCCGCCTCTTCCACTCAGACCTCATTGAGGGCC 121918580 28143 NM_000283.3(PDE6B):c.1591C>T (p.Arg531Ter) PDE6B Jun 01, 1993 MedGen:C3151107,OMIM:613801 Retinitis pigmentosa 40 germline 4 660590 ATCCAGATGTACTACGAGCTGGGCGTGGTCCGAAAGTTCCAGATCCCCCAGGAGGTGGGAG 1057519513 362298 NM_001003694.1(BRPF1):c.3298C>T (p.Arg1100Ter) BRPF1 Feb 09, 2017 MedGen:C4310617,OMIM:617333 Intellectual developmental disorder with dysmorphic facies and ptosis germline 3 9745904 GATGCTCTGGACCTCGTGTGGGCCAAATGCCGAGGCTATCCATCATACCCAGCTCTGGTAT 606231292 167504 NM_033071.3(SYNE1):c.10789C>T (p.Arg3597Ter) SYNE1 Feb 05, 2013 MedGen:C1853116,OMIM:610743,Orphanet:ORPHA88644 Spinocerebellar ataxia, autosomal recessive 8 germline 6 152354817 CAGGCTTACCAGCACAGGCTGTCCGAGACTCGAACTCAGTTCAATAACGTGGTGAACAAAT 794727531 193770 NM_000350.2(ABCA4):c.4429C>T (p.Gln1477Ter) ABCA4 Aug 21, 2014 MeSH:C535804,MedGen:C1855465,OMIM:248200 Stargardt disease 1 germline 1 94029555 TCCCCAAACATCACCCAGCTGTTCCAGAAGCAGAAATGGACACAGGTCAACCCTTCACCAT 759607901 225791 NM_006502.2(POLH):c.907C>T (p.Arg303Ter) POLH Jan 01, 2013 MedGen:C1848410,OMIM:278750,Orphanet:ORPHA90342 Xeroderma pigmentosum, variant type germline 6 43604637 CTTATTAGGTCTTGGCTATATGCCATGTGCCGAGGGATTGAACATGATCCAGTTAAACCCA 80338785 34003 NM_000334.4(SCN4A):c.2014C>T (p.Arg672Cys) SCN4A Apr 28, 2009 MedGen:CN074266,OMIM:170500;MedGen:C3714580,OMIM:170400 Hyperkalemic Periodic Paralysis Type 1;Hypokalemic periodic paralysis 1 germline 17 63959270 GTACAGGGACTGTCTGTGCTACGCTCCTTCCGTCTGGTACACAAAAGCCCCAGGGCCAGGG 794727170 191799 NM_004006.2(DMD):c.1912C>T (p.Gln638Ter) DMD Feb 24, 2015 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Becker muscular dystrophy;Duchenne muscular dystrophy germline X 32565782 CTTTCAACACTGAAGAATAAGTCAGTGACCCAGAAGACGGAAGCATGGCTGGATAACTTTG 775607037 187091 NM_016035.4(COQ4):c.421C>T (p.Arg141Ter) COQ4 Jun 07, 2016 MedGen:C4225392,OMIM:616276,Orphanet:ORPHA457185 Coenzyme Q10 deficiency, primary, 7 germline 9 128332171 CATGGTTGTCAGAGGGTCTCCCCAGACACCCGAGCACCCACCCGCTTCGTGGATGATGAGG 886043992 272976 NM_004369.3(COL6A3):c.9193C>T (p.Gln3065Ter) COL6A3 Jun 14, 2016 Human Phenotype Ontology:HP:0003198,MedGen:C0026848 Myopathy germline 2 237334662 CATGTGGCTGTGGTCTGCTACCTGAGGTCTCAGGTCAGAGCCACCTACCACGGAAGTTTCA 80357497 69389 NM_007294.3(BRCA1):c.2923C>T (p.Gln975Ter) BRCA1 Sep 15, 2016 MedGen:C2676676,OMIM:604370;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 1;Hereditary cancer-predisposing syndrome germline 17 43092608 CTCATTACTCCAAATAAACATGGACTTTTACAAAACCCATATCGTATACCACCACTTTTTC 61752123 28743 NM_000318.2(PEX2):c.355C>T (p.Arg119Ter) PEX2 Mar 31, 2017 MedGen:C3542026,OMIM:614867;MedGen:C3553940,OMIM:614866;MedGen:C1832200,Orphanet:ORPHA79189 Peroxisome biogenesis disorder 5B;Peroxisome biogenesis disorder 5a (zellweger);Peroxisome biogenesis disorders, Zellweger syndrome spectrum germline;unknown 8 76983824 TGTACAATTGGTGGCAGGTGGTTAGAAGAACGATGCTATGATTTGTTTCGAAACCATCATT 104893621 24521 NM_001298.2(CNGA3):c.1306C>T (p.Arg436Trp) CNGA3 Oct 01, 2001 MedGen:C1857618,OMIM:216900 Achromatopsia 2 germline 2 98396476 TTCCGCAAGGTCACCAAGGACTTGGAGACGCGGGTTATCCGGTGGTTTGACTACCTGTGGG 869312747 226220 NM_014625.3(NPHS2):c.812C>T (p.Pro271Leu) NPHS2 Jan 01, 2016 MedGen:C1868672,OMIM:600995,Orphanet:ORPHA656 Nephrotic syndrome, idiopathic, steroid-resistant unknown 1 179552664 CTTTCTTTTTCAGTAAAGATGTGAGGTTGCCAGCTGGGCTTCAGCACTCACTGGCTGTGGA 398123870 100386 NM_004006.2(DMD):c.1990C>T (p.Gln664Ter) DMD Dec 11, 2012 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009;MedGen:C3668940,OMIM:302045;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Becker muscular dystrophy;Dilated cardiomyopathy 3B;Duchenne muscular dystrophy germline X 32565704 TTAGTCCAAAAACTTGAAAAGAGTACAGCACAGGTTAGTGATACCAATTATCATGCTACAG 138680796 40094 NM_174917.4(ACSF3):c.1411C>T (p.Arg471Trp) ACSF3 Aug 14, 2011 MedGen:C3280314,OMIM:614265,Orphanet:ORPHA289504 Combined malonic and methylmalonic aciduria germline 16 89145311 TTTAAGGATGGCCAGTACTGGATCCGAGGCCGGACCTCAGTGGACATCATCAAGACTGGAG 372277017 136108 NM_133378.4(TTN):c.12064C>T (p.Arg4022Ter) TTN Jan 30, 2014 MedGen:C1838244,OMIM:600334,Orphanet:ORPHA609 Distal myopathy Markesbery-Griggs type germline 2 178733497 ACCATTGTAGAACCTGCCAAAATCATTGAGCGAGCAGAACTGATCCAGGTGACAGCAGGAG 387907007 39728 NM_005461.4(MAFB):c.211C>T (p.Pro71Ser) MAFB Mar 09, 2012 MedGen:C2674705,OMIM:166300,Orphanet:ORPHA2774 Multicentric osteolysis nephropathy germline 20 40688640 AGCACTCCGTGTAGCTCCGTGCCCTCGTCGCCCAGCTTCAGCCCGACCGAACAGAAGACAC 373844629 456980 NM_001277115.1(DNAH11):c.6004C>T (p.Arg2002Ter) DNAH11 May 16, 2017 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244 Ciliary dyskinesia germline 7 21690844 TTTATTACTATGAACCCGGGTTATGCTGGTCGAACCGAATTACCGGAAAATCTCAAAGCTC 879253747 243971 NM_020732.3(ARID1B):c.2941C>T (p.Gln981Ter) ARID1B Mar 27, 2014 Human Phenotype Ontology:HP:0001344,MedGen:C1854882;Human Phenotype Ontology:HP:0000581,MedGen:C0005744;Human Phenotype Ontology:HP:0002342,MedGen:C0026351;Human Phenotype Ontology:HP:0000527,MedGen:C1853738;Human Phenotype Ontology:HP:0000179,MedGen:C2053437;Human Phenotype Ontology:HP:0000219,MedGen:C1865017 Absent speech;Blepharophimosis;Intellectual disability, moderate;Long eyelashes;Thick lower lip vermilion;Thin upper lip vermilion de novo 6 157167101 GGACTTATGGCTTCCAGCTCTCCCTACAGCCAGCCCATGAACAACAGCTCTAGCCTGATGA 751130485 259651 NM_206933.2(USH2A):c.5836C>T (p.Arg1946Ter) USH2A Jul 24, 2017 MedGen:CN517202 not provided germline 1 216072910 GAAGGAGGTTCAGTATATAGTGATTGGAGTCGAGGACGTACAACAGGAGCAGGTAAATACT 763389916 260671 NM_000050.4(ASS1):c.773+49C>T ASS1 Sep 01, 2016 MedGen:C0175683,OMIM:215700,Orphanet:ORPHA187 Citrullinemia type I germline 9 130479849 GTCCGGCCTCTTGGGAACCGCCGTCTCGGGCGAGCACGAGCCTGGACCGTTGCAGCTAATG 863225091 214086 NM_001001523.1(RORC):c.922C>T (p.Gln308Ter) RORC Aug 07, 2015 MedGen:C4225266,OMIM:616622,Orphanet:ORPHA477857 Immunodeficiency 42 germline 1 151813569 CGGTGTGCCCACCACCTCACCGAGGCCATTCAGTACGTGGTGGAGTTCGCCAAGAGGCTCT 121434402 21270 NM_016156.5(MTMR2):c.1276C>T (p.Gln426Ter) MTMR2 May 01, 2000 MedGen:C1832399,OMIM:601382,Orphanet:ORPHA99955 Charcot-Marie-Tooth disease, type 4B1 germline 11 95845063 CATTGCAGTGATGGTTGGGATCGCACAGCTCAGCTCACTTCCCTTGCCATGCTCATGTTGG 797044930 205274 NM_000834.3(GRIN2B):c.1916C>T (p.Ala639Val) GRIN2B Oct 28, 2013 MeSH:D030342,MedGen:C0950123 Inborn genetic diseases germline 12 13608697 AGATCATGGTGTCAGTGTGGGCCTTCTTTGCTGTCATCTTCCTGGCCAGCTACACTGCCAA 281864981 47639 NM_024312.4(GNPTAB):c.1519C>T (p.Gln507Ter) GNPTAB May 10, 2012 MedGen:C2673377,OMIM:252500,Orphanet:ORPHA576 I cell disease not provided 12 101766184 GGAGGAATAAACAGTGTCTCTTACTGTAATCAGGGATGTGCGAATTCCTGGCTCGCTGATA 137853064 22534 NM_001172567.1(MYD88):c.625C>T (p.Arg209Cys) MYD88 Aug 01, 2008 MedGen:C2677092,OMIM:612260,Orphanet:ORPHA183713 Myd88 deficiency germline 3 38140510 AACTATCGACTGAAGTTGTGTGTGTCTGACCGCGATGTCCTGCCTGGCACCTGTGTCTGGT 886040849 261555 NM_000059.3(BRCA2):c.9739C>T (p.Gln3247Ter) BRCA2 Oct 18, 2016 MedGen:C2675520,OMIM:612555 Breast-ovarian cancer, familial 2 germline 13 32398252 AGGAAGTCTGTTTCCACACCTGTCTCAGCCCAGATGACTTCAAAGTCTTGTAAAGGGGAGA 122460156 26553 NM_001011658.3(TRAPPC2):c.391C>T (p.Gln131Ter) TRAPPC2 Apr 01, 2002 MedGen:C0220776,OMIM:313400,SNOMED CT:51952004 Spondyloepiphyseal dysplasia tarda germline X 13714439 ATTCGATCAAGTGCATTTGACAGAAAAGTTCAGTTTCTTGGGAAGAAACACCTTTTAAGCT 118204120 16525 NM_000190.3(HMBS):c.445C>T (p.Arg149Ter) HMBS Nov 25, 2015 MedGen:C0162565,OMIM:176000,Orphanet:ORPHA79276,SNOMED CT:234422006 Acute intermittent porphyria germline;unknown 11 119090212 CTGGGCAGTGTGGTGGGAACCAGCTCCCTGCGAAGAGCAGCCCAGCTGCAGAGAAAGTTCC 587779783 132738 NM_000038.5(APC):c.2413C>T (p.Arg805Ter) APC May 07, 2016 MedGen:CN240755;MedGen:C2713442,OMIM:175100;MedGen:C0027672,SNOMED CT:699346009 Familial adenomatous polyposis;Familial adenomatous polyposis 1;Hereditary cancer-predisposing syndrome germline 5 112838007 CTCTATGGTGATTATGTTTTTGACACCAATCGACATGATGATAATAGGTCAGACAATTTTA 373780305 55471 NM_032119.3(ADGRV1):c.2398C>T (p.Arg800Ter) ADGRV1 Jan 10, 2013 MedGen:C1854237,OMIM:605472 Usher syndrome, type 2C germline 5 90642886 GAAGGAGAATCTGTAGAGCTCCACATCATCCGATCAAGGGGGTCCCTTGTTAAGCAGTTTC 121909248 23128 NM_153427.2(PITX2):c.250C>T (p.Arg84Trp) PITX2 Jan 01, 1998 MedGen:C1842031,OMIM:137600 Iridogoniodysgenesis, dominant type germline 4 110621166 GTGTGGACCAACCTTACGGAAGCCCGAGTCCGGGTAGGAGCCAGCACGGAGTCTGGGAGGG 121918277 17223 NM_022370.3(ROBO3):c.733C>T (p.Arg245Trp) ROBO3 Mar 01, 2006 MedGen:C1846496,OMIM:607313,Orphanet:ORPHA2744 Gaze palsy, familial horizontal, with progressive scoliosis germline 11 124870035 GTGTGCGTAGCCTCCAACATGGCGGGAGAACGGGAGAGTGCGGCAGCTGAAGTCATGGTAC 200670286 39820 NM_018122.4(DARS2):c.1825C>T (p.Arg609Trp) DARS2 Oct 01, 2011 MedGen:C1970180,OMIM:611105,Orphanet:ORPHA137898 Leukoencephalopathy with Brainstem and Spinal Cord Involvement and Lactate Elevation germline 1 173857592 AGAGATGTCATAGCCTTCCCAAAGTCCTTCCGGGGACATGACCTCATGAGCAATACCCCAG 104894766 26510 NM_005448.2(BMP15):c.226C>T (p.Arg76Cys) BMP15 May 01, 2006 MedGen:C1845295 Premature ovarian failure 4 germline X 50911009 TCACTGCGGTACATGCTGGAGTTGTACCGGCGTTCAGCTGACTCGCATGGGCACCCTAGAG 121908715 16998 NM_000022.3(ADA):c.986C>T (p.Ala329Val) ADA Apr 14, 2017 MedGen:C1863236,OMIM:102700,Orphanet:ORPHA277;MedGen:C1863236,OMIM:102700,Orphanet:ORPHA277;MedGen:CN517202 Severe combined immunodeficiency due to ADA deficiency;Severe combined immunodeficiency due to ADA deficiency;not provided germline;unknown 20 44620391 TGCCATTCTGGCCTTTCCAGAACATCAATGCGGCCAAATCTAGTTTCCTCCCAGAAGATGA 769035379 264695 NM_002905.3(RDH5):c.160C>T (p.Arg54Ter) RDH5 Mar 06, 2016 MedGen:CN517202 not provided germline 12 55721344 CTGGCACTGCAGCTGGACCAGAGAGGCTTCCGAGTCCTGGCCAGCTGCCTGACCCCCTCCG 587783454 168629 NM_017780.3(CHD7):c.6850C>T (p.Arg2284Ter) CHD7 Aug 26, 2015 MedGen:C0265354,OMIM:214800,Orphanet:ORPHA138,SNOMED CT:47535005 CHARGE association germline 8 60854437 GCTTCCATGAGCACTGCTAGAGATGAAACCCGAGATGGATTCTACATGGAGGACGGAGATC 61752116 22740 NM_004565.2(PEX14):c.553C>T (p.Gln185Ter) PEX14 Jun 01, 2004 MedGen:C3554004,OMIM:614887 Peroxisome biogenesis disorder 13A germline 1 10624405 GAGCTGCTGATTCAGCAGCAGCAGAAGATCCAGGAGCTTGCCCACGAGCTGGCCGCTGCCA 137852372 25184 NM_000132.3(F8):c.1336C>T (p.Arg446Ter) F8 Oct 01, 1990 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154966077 CAGCGGATTGGTAGGAAGTACAAAAAAGTCCGATTTATGGCATACACAGATGAAACCTTTA 398123948 100512 NM_004006.2(DMD):c.4117C>T (p.Gln1373Ter) DMD Nov 28, 2012 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009;MedGen:C3668940,OMIM:302045;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Becker muscular dystrophy;Dilated cardiomyopathy 3B;Duchenne muscular dystrophy germline X 32411868 AAGTTGCTTGAACAGAGCATCCAGTCTGCCCAGGAGACTGAAAAATCCTTACACTTAATCC 17857094 187625 NM_003159.2(CDKL5):c.2494C>T (p.Gln832Ter) CDKL5 Mar 13, 2014 MedGen:C1839333,OMIM:300672 Early infantile epileptic encephalopathy 2 de novo X 18625245 CGCCCCGAGAAGATCTCAGATCTGCAGACCCAAGTGAGTGGATCCTGCACCACTGCTAGAC 879253988 244699 NM_030962.3(SBF2):c.4315C>T (p.Gln1439Ter) SBF2 Aug 15, 2015 MedGen:CN517202 not provided germline 11 9808128 GATCCCTTTTATAGGACACTTGAAGGCTTCCAGATGTTGGTTGAAAAAGAGTGGCTCTCTT 137852922 18443 NM_015102.4(NPHP4):c.2335C>T (p.Gln779Ter) NPHP4 Feb 10, 2016 MedGen:C0687120,Orphanet:ORPHA655,SNOMED CT:204958008;MedGen:C1846979,OMIM:606996 Nephronophthisis;Senior-Loken syndrome 4 germline 1 5887436 CATCTCCTCCGCCAAGGCCGGCCGGCTGTGCAGGCCTCCCACGAGCTTGAGGTCGTGGCAA 201632198 55279 NM_024022.2(TMPRSS3):c.325C>T (p.Arg109Trp) TMPRSS3 May 18, 2017 MedGen:C1832827,OMIM:601072,OMIM:605316;MedGen:CN239439;MedGen:CN043648,Orphanet:ORPHA87884;MedGen:CN517202 Deafness, autosomal recessive 8;Nonsyndromic Hearing Loss, Recessive;Nonsyndromic hearing loss and deafness;not provided germline;unknown 21 42388524 TAAGCCTTTCTTTCTGCACATCGGCCAGTCCGGGTGGGTGGTCAGAATGCCGTGCTCCAGG 104894585 78461 NM_000891.2(KCNJ2):c.224C>T (p.Thr75Met) KCNJ2 Sep 22, 2014 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MedGen:CN517202 Congenital long QT syndrome;not provided germline 17 70175263 GGCAACGGTACCTCGCAGACATCTTCACCACGTGTGTGGACATTCGCTGGCGGTGGATGCT 104894511 17303 NM_000101.3(CYBA):c.7C>T (p.Gln3Ter) CYBA Mar 01, 2000 MedGen:C1856255,OMIM:233690 Granulomatous disease, chronic, autosomal recessive, cytochrome b-negative germline 16 88651007 TGTCCCAGCCGGGTTCGTGTCGCCATGGGGCAGATCGAGTGGGCCATGTGGGCCAACGAAC 398123383 98887 NM_000426.3(LAMA2):c.6955C>T (p.Arg2319Ter) LAMA2 Feb 23, 2016 MedGen:C1263858,OMIM:607855,Orphanet:ORPHA258,SNOMED CT:111503008 Merosin deficient congenital muscular dystrophy germline 6 129460287 GACAACAAACCTATAGGTTTGTGGAATTTCCGAGAAAAAGAAGGTGACTGCAAAGGATGCA 606231294 167521 NM_004415.3(DSP):c.1790C>T (p.Ser597Leu) DSP Apr 11, 2017 MedGen:C4014393,OMIM:615821;MedGen:CN517202 Cardiomyopathy, dilated, with woolly hair, keratoderma, and tooth agenesis;not provided germline 6 7571471 ACCAAGAGTTCATCAGAAATAGCCAAGGCTCAGAGATGTTTGGAGATGATGACAAGCGGAA -1 470758 NM_000540.2(RYR1):c.11662C>T (p.Gln3888Ter) RYR1 Dec 16, 2016 MedGen:CN239331 RYR1-Related Disorders germline 19 38537933 GAATTCACACAAGACCTGTTCCGATTCCTACAATTGCTCTGTGAGGGGCACAATAATGGTG 267607088 19844 NM_006415.3(SPTLC1):c.1055C>T (p.Ala352Val) SPTLC1 Oct 01, 2009 MedGen:C0020071,OMIM:162400,Orphanet:ORPHA36386 Neuropathy hereditary sensory and autonomic type 1 germline 9 92047198 CTCCCCTGTTAGCTGCTGCAGCAATTGAGGCCCTCAACATCATGGAAGAGAATCCAGGTAT 80358972 46655 NM_000059.3(BRCA2):c.7480C>T (p.Arg2494Ter) BRCA2 Aug 22, 2017 MedGen:C2675520,OMIM:612555;MedGen:C2675520,OMIM:612555;MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C1838457,OMIM:605724,Orphanet:ORPHA319462;MedGen:C2751641,OMIM:613029;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;Human Phenotype Ontology:HP:0012125,MedGen:C0376358,OMIM:176807,SNOMED CT:399068003;Human Phenotype Ontology:HP:0002885,MeSH:D008527,MedGen:C0025149,OMIM:155255,Orphanet:ORPHA616;MedGen:C3150546,OMIM:613347;MedGen:C1861028,OMIM:189960;MedGen:CN033288,OMIM:194070;MedGen:CN517202 Breast-ovarian cancer, familial 2;Breast-ovarian cancer, familial 2;Familial cancer of breast;Fanconi anemia, complementation group D1;Glioma susceptibility 3;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;Malignant tumor of prostate;Medulloblastoma;Pancreatic cancer 2;Tracheoesophageal fistula;Wilms tumor 1;not provided germline;unknown 13 32356472 CTTCAGAATGCCAGAGATATACAGGATATGCGAATTAAGAAGAAACAAAGGCAACGCGTCT 113994170 33869 NM_000018.3(ACADVL):c.1405C>T (p.Arg469Trp) ACADVL Apr 30, 2014 MedGen:C3887523,OMIM:201475,Orphanet:ORPHA26793,SNOMED CT:237996001,SNOMED CT:237997005 Very long chain acyl-CoA dehydrogenase deficiency unknown 17 7224040 CGGATCTTTGAGGGGACAAATGACATTCTTCGGCTGTTTGTGGCTCTGCAGGGCTGTATGG 786205228 188142 NM_014225.5(PPP2R1A):c.536C>T (p.Pro179Leu) PPP2R1A May 31, 2016 MedGen:C0153574,Orphanet:ORPHA213569;MedGen:C4225352,OMIM:616362,Orphanet:ORPHA457284;MedGen:C0280630;MedGen:CN517202 Malignant neoplasm of body of uterus;Mental retardation, autosomal dominant 36;Uterine Carcinosarcoma;not provided germline;somatic 19 52212718 ACTTCCGGAACCTGTGCTCAGATGACACCCCCATGGTGCGGCGGGCCGCAGCCTCCAAGCT 121913576 29339 NM_000426.3(LAMA2):c.7147C>T (p.Arg2383Ter) LAMA2 Feb 27, 2013 MedGen:C1842898;MedGen:C1263858,OMIM:607855,Orphanet:ORPHA258,SNOMED CT:111503008 Congenital muscular dystrophy due to partial LAMA2 deficiency;Merosin deficient congenital muscular dystrophy germline 6 129464444 TCGAGTGCTCTTCTGATGTATCTTGCCACACGAGACCTGGTAAAGATCATATGCATAGCAG 137853252 25918 NM_000284.3(PDHA1):c.904C>T (p.Arg302Cys) PDHA1 Mar 21, 2016 MedGen:C1839413,OMIM:312170,Orphanet:ORPHA79243;MedGen:CN517202 Pyruvate dehydrogenase E1-alpha deficiency;not provided germline X 19358920 CGATTACTACTTTTCCCTCCCCATAGTTACCGTACACGAGAAGAAATTCAGGAAGTAAGAA -1 481753 NM_020732.3(ARID1B):c.2773C>T (p.Gln925Ter) ARID1B Oct 11, 2017 MedGen:CN517202 not provided germline 6 157148845 AGCATGACCCCCAGTTCTCCTGGCATGTCTCAGCAGGGAGGGCCAGGAATGGGGCCGCCAA 137853043 22109 NM_006009.3(TUBA1A):c.790C>T (p.Arg264Cys) TUBA1A Dec 04, 2015 MedGen:C1969029,OMIM:611603,Orphanet:ORPHA102011 Lissencephaly 3 germline 12 49185576 GAATTCCAGACCAACCTGGTGCCCTATCCCCGCATCCACTTCCCTCTGGCCACATATGCCC 121912863 32448 NM_000092.4(COL4A4):c.4715C>T (p.Pro1572Leu) COL4A4 Nov 01, 1998 MedGen:C1567744,OMIM:203780,Orphanet:ORPHA88919 Alport syndrome, autosomal recessive germline 2 227008112 ATGTCAGCCGCTGTGCGGTATGCGAGGCCCCGGCCCAGGCGGTGGCGGTGCACAGCCAGGA 886041347 264844 NM_000267.3(NF1):c.2446C>T (p.Arg816Ter) NF1 Jun 23, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Neurofibromatosis, type 1;not provided germline 17 31229061 GAAAGCCTTCACAAGACCATTGTTAAGAGGCGAATGTCCCATGTGAGTGGAGGAGGATCCA 863225044 213903 NM_002860.3(ALDH18A1):c.412C>T (p.Arg138Trp) ALDH18A1 Sep 15, 2015 MedGen:C4225268,OMIM:616603;MedGen:CN517202 Cutis laxa, autosomal dominant 3;not provided germline 10 95637328 CGCCATGAGATCCTTCTGTCTCAGAGCGTGCGGCAGGCCCTCCACTCGGGGCAGAACCAGC 57499817 29687 NM_000424.3(KRT5):c.74C>T (p.Pro25Leu) KRT5 Sep 01, 2011 MedGen:C0432316,OMIM:131960,Orphanet:ORPHA79397,SNOMED CT:254180002;MedGen:CN517202 Epidermolysis bullosa simplex with mottled pigmentation;not provided germline 12 52520223 GTAGCTTCAGCACCGCCTCTGCCATCACCCCGTCTGTCTCCCGCACCAGCTTCACCTCCGT 120074138 17950 NM_030962.3(SBF2):c.3586C>T (p.Arg1196Ter) SBF2 May 01, 2003 MedGen:C1858280 Charcot-Marie-Tooth disease type 4B2 with early-onset glaucoma germline 11 9832290 AAGAACTCAAGAAGTGGTACTCTGCTCCTCCGATCTGGAGGATTCCATGGGAAGGGAGTCG 121908177 19611 NM_031885.3(BBS2):c.823C>T (p.Arg275Ter) BBS2 Aug 12, 2017 MedGen:C0752166,OMIM:209900,Orphanet:ORPHA110,SNOMED CT:5619004;MedGen:C2936863,OMIM:615981;MedGen:CN517202 Bardet-Biedl syndrome;Bardet-Biedl syndrome 2;not provided germline;unknown 16 56502790 TTTTATTTGTAGGTTGATGCTCGAAGTGACCGAACTGGGGAGGTCATCTTTAAGGACAATT 121913630 29134 NM_000257.3(MYH7):c.2167C>T (p.Arg723Cys) MYH7 Aug 14, 2017 MedGen:CN230736;MedGen:C3495498,OMIM:192600;Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Cardiovascular phenotype;Familial hypertrophic cardiomyopathy 1;Hypertrophic cardiomyopathy;Primary familial hypertrophic cardiomyopathy;not provided germline 14 23425814 GTGACTCTGGACACTTCCCTCCTCAGGTATCGCATCCTGAACCCAGCGGCCATCCCTGAGG 104893651 19251 NM_001127366.2(PAX3):c.251C>T (p.Ser84Phe) PAX3 Jun 04, 2016 MedGen:C0342680,OMIM:148820,SNOMED CT:237918004;MedGen:C1847800,OMIM:193500 Klein-Waardenberg's syndrome;Waardenburg syndrome type 1 germline 2 222297048 GCCAGCTGCGCGTGTCCCACGGCTGCGTCTCCAAGATCCTGTGCAGGTACCAGGAGACTGG 797044535 178794 NM_000081.3(LYST):c.3622C>T (p.Gln1208Ter) LYST Jan 15, 2015 MedGen:C0007965,OMIM:214500,Orphanet:ORPHA167,SNOMED CT:111396008 Chédiak-Higashi syndrome germline 1 235802998 GGTGATTTTTCAGAAGAAGCTGAGGATTCTCAGTGTTGTAGTTTTAAACTTTTAGTTGAAG 118203960 16175 NM_001142617.1(STRA6):c.1931C>T (p.Thr644Met) STRA6 Mar 01, 2007 MedGen:C1832661,OMIM:601186,Orphanet:ORPHA2470 Microphthalmia syndromic 9 germline 15 74180153 GCGGCAGGGCTCGCTGGGGTCTGGCCTACACGCTGCTGCACAACCCAACCCTGCAGGTCTT 63750425 29306 NM_016835.4(MAPT):c.2006C>T (p.Ser669Leu) MAPT Nov 01, 2003 MedGen:C0038868,OMIM:601104,SNOMED CT:28978003;MedGen:CN517202 Progressive supranuclear ophthalmoplegia;not provided germline 17 46018675 AGAAGCTTGACTTCAAGGACAGAGTCCAGTCGAAGATTGGGTCCCTGGACAATATCACCCA 121912997 31884 NM_004415.3(DSP):c.3799C>T (p.Arg1267Ter) DSP Jul 10, 2014 MedGen:C1854063,OMIM:605676,Orphanet:ORPHA65282;MeSH:D008133,MedGen:C0023976,SNOMED CT:9651007;EFO:EFO_0000407,Human Phenotype Ontology:HP:0001644,MedGen:C0007193,Orphanet:ORPHA217604,SNOMED CT:195021004 Cardiomyopathy dilated with woolly hair and keratoderma;Long QT syndrome;Primary dilated cardiomyopathy germline 6 7579989 AATGACAGCATCTTGCAGGCCACTGAGCAGCGAAGGCGAGCTGAAGAAAACGCCCTTCAGC 570278338 168182 NM_022455.4(NSD1):c.4411C>T (p.Arg1471Ter) NSD1 Feb 16, 2016 MedGen:C0004903,OMIM:130650,Orphanet:ORPHA116,SNOMED CT:81780002;MedGen:CN035106,OMIM:117550 Beckwith-Wiedemann syndrome;Sotos syndrome 1 germline 5 177246710 ACTACCAAGATATTTGACAAGCCAAGGAAGCGAAAACGACAGAGGCATGCTGCAGCCAAGA 587779075 96032 NM_000251.2(MSH2):c.1165C>T (p.Arg389Ter) MSH2 Sep 05, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0009405,Orphanet:ORPHA443090;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:C2936783,OMIM:120435;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Hereditary nonpolyposis colon cancer;Lynch syndrome;Lynch syndrome I;not provided germline;unknown 2 47429830 GATTTACTTCGTCGATTCCCAGATCTTAACCGACTTGCCAAGAAGTTTCAAAGACAAGCAG 749655461 359095 NM_003805.4(CRADD):c.508C>T (p.Arg170Cys) CRADD Dec 19, 2016 MedGen:C3281044,OMIM:614499 Mental retardation, autosomal recessive 34 germline 12 93850179 GTGGTGGAGGCCTTCATCCGTTGGCGGCAGCGCTTCGGGAAGCAGGCCACCTTCCAGAGCC 62514953 15637 NM_000277.2(PAH):c.818C>T (p.Ser273Phe) PAH Jan 01, 1991 MedGen:C0031485,OMIM:261600,Orphanet:ORPHA716,SNOMED CT:154735006;MedGen:CN517202 Phenylketonuria;not provided germline 12 102852839 TCCACTGCACACAGTACATCAGACATGGATCCAAGCCCATGTATACCCCCGAACCGTGAGT 886039673 259717 NM_001204.6(BMPR2):c.1789C>T (p.Arg597Ter) BMPR2 Jun 15, 2016 MedGen:C0152171,OMIM:178600,SNOMED CT:26174007;MedGen:CN517202 Primary pulmonary hypertension;not provided germline 2 202555454 ATTAACTATGAACGACAGCAAGCACAAGCTCGAATCCCCAGCCCTGAAACAAGTGTCACCA 796052116 200881 NM_001130144.2(LTBP3):c.421C>T (p.Gln141Ter) LTBP3 Jun 01, 2015 MedGen:C1832594,OMIM:601216,Orphanet:ORPHA2899 Verloes Bourguignon syndrome germline 11 65554291 TGTCCCCCGGACTTCACTGGGCGCTTCTGCCAGGTGCCCGCAGGAGGAGCCGGTGGGGGTA 757208121 394140 NM_001080522.2(CC2D2A):c.1267C>T (p.Arg423Ter) CC2D2A Sep 13, 2016 Human Phenotype Ontology:HP:0002335,MedGen:C0431399,Orphanet:ORPHA475,SNOMED CT:253175003,SNOMED CT:716997004;MedGen:C0265215,Orphanet:ORPHA564,SNOMED CT:29076005 Joubert syndrome;Meckel-Gruber syndrome germline 4 15527564 TTAATCTTCACTCATCATCCCTGTTTTAGCCGAGAGCATGTTTTGGCAGCCAAGCTGGCCC 137852292 25576 NM_000292.2(PHKA2):c.394C>T (p.His132Tyr) PHKA2 May 01, 1996 MedGen:C2748941 Glycogen storage disease IXa2 germline X 18951164 GGCACGGTGGTGGGCGACGACCAGTGGGGCCACCTCCAGGTGGATGCCACCTCTCTCTTCC 794726869 190188 NM_138395.3(MARS2):c.550C>T (p.Gln184Ter) MARS2 Jun 01, 2015 MedGen:C4225329,OMIM:616430,Orphanet:ORPHA447954 Combined oxidative phosphorylation deficiency 25 germline 2 197705955 GAGTGCTTCCTGCCTGAGGCCAAGGTCACCCAGCAGCCGGGCCCATCGGGGGATTCGTTTC 387906878 39358 NM_004247.3(EFTUD2):c.2770C>T (p.Gln924Ter) EFTUD2 Feb 10, 2012 MedGen:C1864652,OMIM:610536,Orphanet:ORPHA79113 Growth and mental retardation, mandibulofacial dysostosis, microcephaly, and cleft palate germline 17 44851763 AAGAGCATTGTCATCCGCCCCTTGGAGCCACAGCCAGCTCCTCACCTGGCCCGGGAATTCA 377480477 176111 NM_153700.2(STRC):c.4402C>T (p.Arg1468Ter) STRC Jun 25, 2015 MedGen:CN043648,Orphanet:ORPHA87884 Nonsyndromic hearing loss and deafness germline 15 43603385 TCAGAACCTGTGCCAAATTGTGCAGATGTACGAGGGACATTCCCAGCAGCCTGGTCTGCAA 28940870 18986 NM_000062.2(SERPING1):c.1396C>T (p.Arg466Cys) SERPING1 Jan 05, 2017 MedGen:C1862892,Orphanet:ORPHA100051,SNOMED CT:234620006;MedGen:CN517202 Hereditary C1 esterase inhibitor deficiency - dysfunctional factor;not provided germline 11 57614474 GCGGCTGCAGCCTCCGCCATCTCTGTGGCCCGCACCCTGCTGGTCTTTGAAGTGCAGCAGC 121912700 33152 NM_000666.2(ACY1):c.589C>T (p.Arg197Trp) ACY1 Jun 12, 2007 MedGen:C1835922,OMIM:609924,Orphanet:ORPHA137754 Aminoacylase 1 deficiency germline 3 51986993 CTGCCTTCCCCCTACACCTCCCCAGGGGTGCGGGTTACCAGCACTGGGAGGCCAGGCCATG 58852768 29615 NM_000421.3(KRT10):c.466C>T (p.Arg156Cys) KRT10 Oct 26, 2016 Human Phenotype Ontology:HP:0007475,MedGen:C0079153,OMIM:113800,Orphanet:ORPHA312,SNOMED CT:254167000;MedGen:CN517202 Bullous ichthyosiform erythroderma;not provided germline 17 40822120 GAAAAAGTAACCATGCAGAATCTGAATGACCGCCTGGCTTCCTACTTGGACAAAGTTCGGG 886044302 274139 NM_000328.2(RPGR):c.1387C>T (p.Gln463Ter) RPGR Aug 02, 2016 MedGen:C1848295,OMIM:300029 Retinitis pigmentosa 15 germline X 38297311 AGAAACCTCCAAGAGAGTGTCTTATCTGAACAGGACCTCATGCAGCCAGAGGAACCAGGTA 863225212 214376 NM_003611.2(OFD1):c.2668C>T (p.Arg890Ter) OFD1 Jul 19, 2016 MedGen:C2749019,OMIM:300804;MedGen:CN517202 Joubert syndrome 10;not provided germline;unknown X 13767195 GAAAAAATACGGGAACAGCAAGTGAAAGAACGAAGGCAGAGAGAAGAAAGAAGGCAGAGTA -1 260332 NM_007075.3(WDR45):c.46C>T (p.Gln16Ter) WDR45 Feb 11, 2016 MedGen:CN517202 not provided germline X 49078050 CTTCGAGGAGTGACCAGCCTGCGTTTCAACCAAGACCAAAGTGAGAGAGGATTGGGCCTGT 397515417 48311 NM_018486.2(HDAC8):c.932C>T (p.Thr311Met) HDAC8 Sep 13, 2012 MedGen:C3550903,OMIM:300882 Cornelia de Lange syndrome 5 germline X 72462077 TGGAGACAGGAGGCTATAACCTTGCCAACACGGCTCGATGCTGGACATACTTGACCGGGGT 121918131 15611 NM_000893.3(KNG1):c.586C>T (p.Arg196Ter) KNG1 Nov 05, 1993 MedGen:C1856719 Kininogen deficiency, total germline 3 186727258 TTGTTTCAGGTGGTGGCTGGATTGAACTTTCGAATTACCTACTCAATTGTGCAAACGAATT 373924400 440193 NM_001080463.1(DYNC2H1):c.9565C>T (p.Gln3189Ter) DYNC2H1 Jun 01, 2017 MedGen:CN674505 Short-rib polydactyly syndrome type III unknown 11 103234158 CTTGACAGAGAACATAAGAGATGGAATGCACAGGTTTGTTTGAGAGAGGGGCCATGAGGAG 797044676 192398 NM_005183.3(CACNA1F):c.244C>T (p.Arg82Ter) CACNA1F Jun 02, 2014 MedGen:C1845407,OMIM:300476;MedGen:C1848172,OMIM:300071 Cone-rod dystrophy X-linked 3;Congenital stationary night blindness, type 2A germline X 49231709 CTCTTCTGCCTCACCCTGGCCAATCCTCTGCGACGGTCCTGCATCAGCATCGTGGAGTGGA 397508983 69274 NM_007294.3(BRCA1):c.2572C>T (p.Gln858Ter) BRCA1 Oct 18, 2016 MedGen:C2676676,OMIM:604370;Human Phenotype Ontology:HP:0100013,MeSH:D001943,MedGen:C1458155,Orphanet:ORPHA180250,SNOMED CT:126926005 Breast-ovarian cancer, familial 1;Neoplasm of the breast germline 17 43092959 GAAGAAAGTGAACTTGATGCTCAGTATTTGCAGAATACATTCAAGGTTTCAAAGCGCCAGT 144411158 39836 NM_017565.3(FAM20A):c.406C>T (p.Arg136Ter) FAM20A Jan 01, 2012 MedGen:C2931783,OMIM:204690,Orphanet:ORPHA1031,SNOMED CT:109477002 Enamel-renal syndrome germline 17 68555742 TCTAATGAACAACTATCTGGCTCTTTCAGGCGACACAAGATGTACAGAGAGCAGATGAACC 121909550 33049 NM_000488.3(SERPINC1):c.1277C>T (p.Ser426Leu) SERPINC1 Apr 06, 1992 MedGen:C0272375,OMIM:613118,Orphanet:ORPHA82,SNOMED CT:36351005 Antithrombin III deficiency germline 1 173904007 CAAGTACCGCTGTTGTGATTGCTGGCCGTTCGCTAAACCCCAACAGGGTGACTTTCAAGGC 878854667 475360 NM_004329.2(BMPR1A):c.271C>T (p.Gln91Ter) BMPR1A May 24, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 10 86892167 CATTGCTTTGCCATCATAGAAGAAGATGACCAGGGAGAAACCACATTAGCTTCAGGGTGTA -1 473514 NM_000249.3(MLH1):c.2098C>T (p.Gln700Ter) MLH1 Jul 07, 2015 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 3 37049012 TACATATCTGAGGAGTCGACCCTCTCAGGCCAGCAGGTACAGTGGTGATGCACACTGGCAC 886043743 272067 NM_001128177.1(THRB):c.67C>T (p.Arg23Ter) THRB Jun 01, 2016 MedGen:C2937288,OMIM:188570 Thyroid hormone resistance, generalized, autosomal dominant germline 3 24190290 GCCTGGGACAAACCGAAGCACTGTCCAGACCGAGAACACGACTGGAAGCTAGTAGGAATGT 137853038 21919 NM_001429.3(EP300):c.1738C>T (p.Arg580Ter) EP300 Feb 03, 2014 MedGen:C0699790,OMIM:114500,SNOMED CT:269533000 Carcinoma of colon somatic 22 41137768 CAGTGGCACGAAGATATTACTCAGGATCTTCGAAATCATCTTGTTCACAAACTGTAAGTAA 1114167457 419135 NM_001031689.2(PLAA):c.2254C>T (p.Leu752Phe) PLAA Jun 21, 2017 MedGen:CN265047,OMIM:617527 NEURODEVELOPMENTAL DISORDER WITH PROGRESSIVE MICROCEPHALY, SPASTICITY, AND BRAIN ANOMALIES germline 9 26905645 ACTTTTAGACTTCTTGTGGCTCTTGGAACACTTATCAGTGATGATTCAAATGCTGTACAAT 794728156 197018 NM_004415.3(DSP):c.151C>T (p.Gln51Ter) DSP Feb 10, 2012 MedGen:CN517202 not provided germline 6 7542066 TACTATTCTCGGCGCGGCGTGATCACCGACCAGAACTCGGACGGCTACTGGTGGGTACCTG 62636495 53427 NM_001927.3(DES):c.38C>T (p.Ser13Phe) DES Jul 22, 2015 MedGen:C1832370,OMIM:601419,Orphanet:ORPHA98909;EFO:EFO_0000407,Human Phenotype Ontology:HP:0001644,MedGen:C0007193,Orphanet:ORPHA217604,SNOMED CT:195021004;MedGen:CN517202 Myofibrillar myopathy 1;Primary dilated cardiomyopathy;not provided germline 2 219418500 AGGCCTACTCGTCCAGCCAGCGCGTGTCCTCCTACCGCCGCACCTTCGGCGGGGCCCCGGG -1 441960 NM_002087.3(GRN):c.898C>T (p.Gln300Ter) GRN Aug 17, 2016 MedGen:CN517202 not provided germline 17 44351425 TGCCCAGATGGCTATACCTGCTGCCGTCTACAGTCGGGGGCCTGGGGCTGCTGCCCTTTTA 387907100 40046 NM_012469.3(PRPF6):c.2185C>T (p.Arg729Trp) PRPF6 May 13, 2011 MedGen:C3151434,OMIM:613983 Retinitis pigmentosa 60 germline 20 64027138 GAGGAGCAGAAGGAGATGATGGAGAAGGCGCGGGAAGCCTATAACCAGGGGGTACGTCTCT -1 482170 NM_014646.2(LPIN2):c.1594C>T (p.Gln532Ter) LPIN2 Dec 06, 2017 MedGen:CN517202 not provided germline 18 2928617 GCTTTGGCAGCTCCCATGATCCTTAGCTTGCAAGTATTCCAGAAGAGCTTGCCTAAGGTGA 369083541 181587 NM_002427.3(MMP13):c.325C>T (p.Arg109Ter) MMP13 Feb 01, 2015 MedGen:C0432225,OMIM:250400,Orphanet:ORPHA2501,SNOMED CT:254084008 Metaphyseal chondrodysplasia, Spahr type germline 11 102955289 CCTGATGTGGGTGAATACAATGTTTTCCCTCGAACTCTTAAATGGTCCAAAATGAATTTAA 754786301 271291 NM_001297.4(CNGB1):c.2128C>T (p.Gln710Ter) CNGB1 Apr 14, 2016 MedGen:C3151066,OMIM:613767 Retinitis pigmentosa 45 germline 16 57917306 CTCATCTACTTCCTGGACATCACCGTGTTCCAGACACGCCTGCAGTTTGTCAGAGGCGGGG 267607059 31159 NM_006516.2(SLC2A1):c.1402C>T (p.Arg468Trp) SLC2A1 Oct 01, 2009 MedGen:C3149117 GLUT1 deficiency syndrome 1, autosomal recessive germline 1 42927118 CGGACCTTCGATGAGATCGCTTCCGGCTTCCGGCAGGGGGGAGCCAGCCAAAGTGACAAGA 397507540 49022 NM_002834.4(PTPN11):c.1472C>T (p.Pro491Leu) PTPN11 Oct 17, 2017 MeSH:D009634,MedGen:C0028326,Orphanet:ORPHA648,SNOMED CT:205824006;MedGen:CN166718,Orphanet:ORPHA98733;MedGen:CN517202 Noonan syndrome;Rasopathy;not provided germline;unknown 12 112489048 TCGTAGGTGTTGACTGCGATATTGACGTTCCCAAAACCATCCAGATGGTGCGGTCTCAGAG -1 446266 NM_004975.3(KCNB1):c.916C>T (p.Arg306Cys) KCNB1 Jul 25, 2017 MedGen:CN517202 not provided germline 20 49374644 GTCCAGATCTTCCGCATCATGCGAATTCTCCGCATCCTTAAGCTTGCACGCCACTCCACTG 878854618 243806 NM_004006.2(DMD):c.1504C>T (p.Gln502Ter) DMD Jan 23, 2016 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Duchenne muscular dystrophy germline X 32595855 ATCTTTCAGGTGCTTCAAGAAGATCTAGAACAAGAACAAGTCAGGGTCAATTCTCTCACTC 121909390 16346 NM_001174089.1(SLC4A11):c.1765C>T (p.Arg589Ter) SLC4A11 Mar 01, 2008 MedGen:C0544008 Corneal endothelial dystrophy germline 20 3229430 GTCCCCAGCCCCTACCTGCACCCCTGCGTGCGAGAGATCCTGTCCGACTGCGCCCTGCCCA 387907026 39802 NM_001029871.3(RSPO4):c.301C>T (p.Gln101Ter) RSPO4 Apr 01, 2008 MedGen:C0265998,OMIM:206800,Orphanet:ORPHA79143,SNOMED CT:23610003 Anonychia germline 20 967282 TGTGGGGCCACTTGTGAGAGCTGCTTCAGCCAGGACTTCTGCATCCGGTGCAAGAGGCAGT -1 453349 NM_000320.2(QDPR):c.344C>T (p.Ser115Leu) QDPR Aug 24, 2016 MedGen:C0268465,OMIM:261630,Orphanet:ORPHA226,SNOMED CT:58256000 Dihydropteridine reductase deficiency germline 4 17501811 ACCTGATGTGGAAGCAGAGCATATGGACATCGACCATCTCCAGCCATCTGGCTACCAAGCA 267606736 23985 NM_001278.4(CHUK):c.1264C>T (p.Gln422Ter) CHUK Oct 21, 2010 MedGen:C3150891,OMIM:613630,Orphanet:ORPHA465824 Cocoon syndrome germline 10 100205167 CAGGACAGCAAAATACAGCTTCCAATTATACAGCTGCGTAAAGTGTGGGCTGAAGCAGTGC 786204849 187243 NM_198897.1(FIBP):c.673C>T (p.Gln225Ter) FIBP Sep 15, 2016 Human Phenotype Ontology:HP:0000589,MedGen:C0009363,OMIM:120200,Orphanet:ORPHA194,SNOMED CT:92828000,SNOMED CT:93390002;Human Phenotype Ontology:HP:0001176,MedGen:C0426870;Human Phenotype Ontology:HP:0000256,MedGen:C2243051,OMIM:248000;Human Phenotype Ontology:HP:0001548,MedGen:C1849265;MedGen:C4310715,OMIM:617107;MedGen:C0266617;MedGen:CN229495 Congenital ocular coloboma;Large hands;Macrocephaly;Overgrowth;Thauvin-Robinet-Faivre syndrome;facial dysmorphism;learning disabilities germline;inherited 11 65885181 CCCCACCCCCTTCATGGCCTCACAGACTCACAGATGGATGACATGGACATGGACTTAGACA 886040971 263045 NM_014112.4(TRPS1):c.1630C>T (p.Arg544Ter) TRPS1 Apr 19, 2017 MedGen:C0432233,OMIM:190350,SNOMED CT:254091006;MedGen:C0432233,OMIM:190350,SNOMED CT:254091006;MedGen:C1860823,OMIM:190351;MedGen:CN517202 Trichorhinophalangeal dysplasia type I;Trichorhinophalangeal dysplasia type I;Trichorhinophalangeal syndrome type 3;not provided de novo;germline 8 115604339 ACGAGCTATAATTGTCAGTTCTGTGACTTCCGATATTCCAAAAGCCATGGCCCTGATGTAA 587776765 27317 NM_000463.2(UGT1A1):c.145C>T (p.Gln49Ter) UGT1A1 Mar 01, 1998 MedGen:C0010324,OMIM:218800,Orphanet:ORPHA79234 Crigler Najjar syndrome, type 1 germline 2 233760432 CACTGGCTGAGCATGCTTGGGGCCATCCAGCAGCTGCAGCAGAGGGGACATGAAATAGTTG 886039425 259695 NM_015702.2(MMADHC):c.472C>T (p.Arg158Ter) MMADHC Jun 23, 2016 MedGen:CN517202 not provided germline 2 149576443 TGTGCAATACAGACATGTCCAGAATTGCTGCGAAAAGGTATGTCATGCTTTATACTTTGAA 132630297 26102 NM_001015877.1(PHF6):c.1024C>T (p.Arg342Ter) PHF6 Jun 09, 2016 MedGen:C0265339,OMIM:301900,SNOMED CT:21634003 Borjeson-Forssman-Lehmann syndrome germline;maternal X 134425256 AATGATGAGAGAGATGAAGAAGATGAGGAACGAGAGAGTAAAAGCCGAGGAAAAGTAGAAA 369804864 227493 NM_001111035.2(ACP5):c.131C>T (p.Thr44Met) ACP5 Aug 25, 2017 MedGen:C1842763,OMIM:607944 Spondyloenchondrodysplasia with immune dysregulation germline 19 11577187 GGGGAGGGGTCCCCAATGCCCCATTCCACACGGCCCGGGAAATGGCCAATGCCAAGGAGAT 104894270 21059 NM_004551.2(NDUFS3):c.595C>T (p.Arg199Trp) NDUFS3 Dec 04, 2012 MedGen:C1838951;MedGen:C1838979,OMIM:252010 Leigh syndrome due to mitochondrial complex I deficiency;Mitochondrial complex I deficiency germline 11 47582436 ACAGATTATGGCTTCGAGGGACATCCTTTCCGGAAAGACTTTCCTCTATCTGGCTATGTTG 398123105 98231 NM_000033.3(ABCD1):c.1679C>T (p.Pro560Leu) ABCD1 Oct 14, 2016 MedGen:C0162309,OMIM:300100,Orphanet:ORPHA43,SNOMED CT:65389002 Adrenoleukodystrophy germline X 153740618 TGGGCTCCCTGCGTGACCAGGTGATCTACCCGGACTCAGTGGAGGACATGCAAAGGAAGGG 148936893 125899 NM_001282227.1(ADA2):c.626C>T (p.Pro209Leu) ADA2 Mar 06, 2014 MedGen:C3887654,OMIM:615688 Polyarteritis nodosa, childhoood-onset germline 22 17203564 TCTACATGGAGATCAGAGCCAGGCTGCTGCCGGTGAGCCCAGCTCTCCTCTCTGTTCCTCC 1131691568 421478 NM_000901.4(NR3C2):c.1768C>T (p.Arg590Ter) NR3C2 Oct 01, 2015 MedGen:CN517202 not provided germline 4 148260107 ATCTCAATTTCTTTCCCCAGCTCTACTTTACGAAGTGTTTCTACTGGATCTTCAAGACCTT -1 440224 NM_015359.5(SLC39A14):c.367C>T (p.Gln123Ter) SLC39A14 Mar 13, 2017 MedGen:C4310765,OMIM:617013 Hypermanganesemia with dystonia 2 germline 8 22408406 GAGCTCCAGGAGTTCTGCCCCACCATCCTCCAGCAGCTGGATTCCCGGGCCTGCACCTCGG 876660130 233049 NM_000038.5(APC):c.1999C>T (p.Gln667Ter) APC Jan 19, 2017 MedGen:C2713442,OMIM:175100;MedGen:C0027672,SNOMED CT:699346009 Familial adenomatous polyposis 1;Hereditary cancer-predisposing syndrome germline 5 112837593 AGAGAGAACAACTGTCTACAAACTTTATTACAACACTTAAAATCTCATAGTTTGACAATAG 757520757 259725 NM_173076.2(ABCA12):c.1300C>T (p.Arg434Ter) ABCA12 Apr 21, 2016 MedGen:CN517202 not provided germline 2 215019784 TTTTCCCTTTTTGGAAAGCTGTCTCAACTTCGAAACTTGACCGAACTTCTTTGTGAATCTG 587784157 168230 NM_022455.4(NSD1):c.5800C>T (p.Gln1934Ter) NSD1 Feb 08, 2013 MedGen:CN035106,OMIM:117550 Sotos syndrome 1 germline 5 177280742 GTGTGTCCTGCCGGAGGGCGCTGTCAAAACCAGTGCTTTTCCAAGCGCCAATATCCAGAGG 121918788 79490 NM_006920.4(SCN1A):c.2758C>T (p.Arg920Cys) SCN1A Feb 01, 2017 MedGen:C1858673,OMIM:604403;MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002;MedGen:CN517202 Generalized epilepsy with febrile seizures plus, type 2;Severe myoclonic epilepsy in infancy;not provided germline 2 166037931 TGCAAGATCGCCAGTGATTGTCAACTCCCACGCTGGCACATGAATGACTTCTTCCACTCCT 869312757 226316 NM_004656.3(BAP1):c.1063C>T (p.Gln355Ter) BAP1 Nov 20, 2015 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 3 52405163 GGGGTTCACCCCAACCCCACTCCCATTGTCCAGCGGCTGCCGGCCTTTCTAGACAATCACA 1060502621 404209 NM_004006.2(DMD):c.8209C>T (p.Gln2737Ter) DMD Sep 26, 2016 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Duchenne muscular dystrophy germline X 31627681 GACTCCAAGGGAGTAAAAGAGCTGATGAAACAATGGCAAGTAAGTCAGGCATTTCCGCTTT -1 411581 NM_004984.3(KIF5A):c.610C>T (p.Arg204Trp) KIF5A Mar 07, 2017 MedGen:C0037773,Orphanet:ORPHA685,SNOMED CT:39912006 Hereditary spastic paraplegia inherited 12 57567514 GCTCCTGCAGACATGAATGAACACAGCTCTCGGAGCCACAGCATCTTCCTCATCAACATCA 587777103 102964 NM_001013703.3(EIF2AK4):c.3802C>T (p.Gln1268Ter) EIF2AK4 Feb 12, 2014 MedGen:C0340848,OMIM:234810,SNOMED CT:234161007 Familial pulmonary capillary hemangiomatosis germline 15 40016544 TACAAGTTTATTGAACAGAAGGGAGATTTGCAAGATCTTATGCCAACAATAAATTCATTAA 55868108 405656 NM_000751.2(CHRND):c.127C>T (p.Arg43Trp) CHRND Mar 01, 2017 MedGen:CN517202 not provided germline 2 232526603 TTTCAAGAGAAGGGCTACAACAAGGAGCTCCGGCCCGTGGCACACAAAGAGGAGAGTGTGG 61752895 28153 NM_000329.2(RPE65):c.700C>T (p.Arg234Ter) RPE65 Oct 01, 1997 MedGen:C1859844,OMIM:204100;MedGen:CN517202 Leber congenital amaurosis 2;not provided germline 1 68439586 GAGATCGTTGTACAATTCCCCTGCAGTGACCGATTCAAGCCATCTTACGTTCATAGGTAAC 1085308053 416946 NM_000314.6(PTEN):c.605C>T (p.Thr202Ile) PTEN Mar 01, 2017 MedGen:C1959582,OMIM:601728,Orphanet:ORPHA306498 PTEN hamartoma tumor syndrome de novo 10 87952230 CACTGTTGTTTCACAAGATGATGTTTGAAACTATTCCAATGTTCAGTGGCGGAACTTGCAG 782397980 206662 NM_032436.3(CHAMP1):c.1489C>T (p.Arg497Ter) CHAMP1 Mar 12, 2015 MedGen:C4225275,OMIM:616579 Mental retardation, autosomal dominant 40 germline 13 114325331 GAGCCTCAGAAACCTGTCTTCCCTGAGACCCGAAAACCAGGTCCTTCTGGGCCATCTGAGT -1 464033 NM_005249.4(FOXG1):c.214C>T (p.Gln72Ter) FOXG1 Jun 22, 2017 MedGen:C3150705,OMIM:613454 Rett syndrome, congenital variant germline 14 28767493 GCCCCGCAACCGCCGCCGCCGCCGCAGCAGCAGCAGCCGCCGCCGCCGCCGCCCCCGGCAC 142017360 425005 NM_000384.2(APOB):c.4651C>T (p.Gln1551Ter) APOB Mar 01, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 2 21012217 ACCCTCTCCCTCACCTCCACCTCTGATCTGCAAAGTGGCATCATTAAAAATACTGCTTCCC 281874676 35783 NM_000495.4(COL4A5):c.1738C>T (p.Gln580Ter) COL4A5 Feb 16, 2017 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917;MedGen:CN517202 Alport syndrome, X-linked recessive;not provided germline X 108597527 GGGCTTCCTGGTTTACCTGGCACTCCTGGACAGGATGGATTGCCAGGGCTTCCTGGCCCGA 762354041 400610 NM_000057.3(BLM):c.2875C>T (p.Arg959Ter) BLM Dec 14, 2016 MedGen:C0005859,OMIM:210900,Orphanet:ORPHA125,SNOMED CT:4434006 Bloom syndrome germline 15 90790700 TTTGGAATGGGGATTGACAAACCGGACGTGCGATTTGTGATTCATGCATCTCTCCCTAAAT 202140402 414413 NM_001013703.3(EIF2AK4):c.745C>T (p.R249*) EIF2AK4 - MedGen:C0340848,OMIM:234810,SNOMED CT:234161007 Familial pulmonary capillary hemangiomatosis germline 15 39961785 CAAATGTATTGTTCAAATTTATTTTTAAGGCGAGAACGTCAGTATTCTGTATGTAATAGTG 796052811 203924 NM_001184880.1(PCDH19):c.1031C>T (p.Pro344Leu) PCDH19 Jul 31, 2014 MedGen:CN517202 not provided germline X 100407567 TCAGCGTGCTGGACACCAATGACAATCCGCCGGTCATCAACCTGCTGTCAGTCAACAGTGA 757160222 262659 NM_017780.3(CHD7):c.5833C>T (p.Arg1945Ter) CHD7 Oct 21, 2016 MedGen:C0265354,OMIM:214800,Orphanet:ORPHA138,SNOMED CT:47535005;MedGen:CN517202 CHARGE association;not provided germline 8 60852186 ATGAAGACTGACCGGCGCAGACGGCGGCCTCGAGAGGAAGTGAGAGCTCTGGAAGCGGAAA 121908425 20379 NM_153717.2(EVC):c.1018C>T (p.Arg340Ter) EVC Jun 01, 2017 MedGen:C0013903,OMIM:225500,Orphanet:ORPHA289,SNOMED CT:62501005;MedGen:C0024507,OMIM:263520,SNOMED CT:72922008;MedGen:CN517202 Chondroectodermal dysplasia;Short rib-polydactyly syndrome, Majewski type;not provided germline;unknown 4 5748226 GACCAGTTTAAGTGTTCCAGCTCCAAAGCCCGACAGCTGATGATGACTCTGACGGAAAGAA 746867724 214299 NM_019892.5(INPP5E):c.1577C>T (p.Pro526Leu) INPP5E Feb 23, 2015 Human Phenotype Ontology:HP:0002335,MedGen:C0431399,Orphanet:ORPHA475,SNOMED CT:253175003,SNOMED CT:716997004 Joubert syndrome unknown 9 136431090 CAGGGTCCATCTTCAAGGGCTTCCAGGAGCCGGACATCCACTTCCTCCCATCATACAAGTT 121918242 16463 NM_015506.2(MMACHC):c.331C>T (p.Arg111Ter) MMACHC Nov 02, 2016 MedGen:C1848561,OMIM:277400,Orphanet:ORPHA26;MedGen:CN517202 Methylmalonic acidemia with homocystinuria;not provided germline;unknown 1 45508266 ATCATTGCTGACTACGAGGTGCACCCCAACCGACGCCCCAAGATCCTGGCCCAGACAGCAG 376103091 48386 NM_001083614.1(EARS2):c.322C>T (p.Arg108Trp) EARS2 May 22, 2017 MedGen:C3554079,OMIM:614924,Orphanet:ORPHA314051;MedGen:CN517202 Combined oxidative phosphorylation deficiency 12;not provided germline;unknown 16 23544677 CCAGGCATCCCGCCTGATGAGAGCCCCCGCCGGGGCGGTCCTGCTGGGCCCTACCAGCAAT 794727165 191759 NM_000404.3(GLB1):c.1768C>T (p.Arg590Cys) GLB1 Jun 25, 2014 MedGen:C0268272,OMIM:230600,Orphanet:ORPHA79256,SNOMED CT:18756002;MedGen:C0268273,OMIM:230650,Orphanet:ORPHA79257;MedGen:C0268271,OMIM:230500,Orphanet:ORPHA79255,SNOMED CT:238026007;MedGen:C0086652,OMIM:253010,Orphanet:ORPHA309310,SNOMED CT:238044004 GM1 gangliosidosis type 2;Gangliosidosis GM1 type 3;Infantile GM1 gangliosidosis;Mucopolysaccharidosis, MPS-IV-B germline 3 32997311 CAGGTCTGGATTAATGGCTTTAACCTTGGCCGCTATTGGCCAGCCCGGGGCCCTCAGTTGA 1057524293 368235 NM_005219.4(DIAPH1):c.2794C>T (p.Arg932Ter) DIAPH1 Jan 05, 2017 MedGen:CN517202 not provided germline 5 141528926 TGTGTTCTTTACTAGATGGGCACTGTGCCCCGACTGCGGCCTCGCCTCAATGCCATTCTCT 398123973 100546 NM_004006.2(DMD):c.4996C>T (p.Arg1666Ter) DMD Jun 19, 2017 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001;MedGen:CN517202 Duchenne muscular dystrophy;not provided germline X 32365049 CTGAATAGTAACTGGATAGCTGTCACCTCCCGAGCAGAAGAGTGGTTAAATCTTTTGTTGG 1131690786 421144 NM_001008222.2(ZDHHC9):c.286C>T (p.Arg96Trp) ZDHHC9 Apr 04, 2017 MedGen:C2749033,OMIM:300799 Mental retardation, X-linked, syndromic, Raymond type de novo X 129829023 ACCAGCTTCAGTGACCCTGGAGTGATTCCTCGGGCGCTACCAGATGAAGCAGCTTTCATAG 121917731 29241 NM_001085377.1(MCC):c.2663C>T (p.Ala888Val) MCC Mar 15, 1991 MedGen:C0699790,OMIM:114500,SNOMED CT:269533000 Carcinoma of colon somatic 5 113043623 TGGAATGTGTTTGCTGTTGTCAGGAGTGTGCTGATGCTGCCTCCCCAGCTCTGTCCCTAGC 863224147 212019 NM_000284.3(PDHA1):c.1132C>T (p.Arg378Cys) PDHA1 Jul 18, 2017 MedGen:C1839413,OMIM:312170,Orphanet:ORPHA79243;MedGen:CN517202 Pyruvate dehydrogenase E1-alpha deficiency;not provided de novo;germline X 19359612 ATCTACTCCAGCGACCCACCTTTTGAAGTTCGTGGTGCCAATCAGTGGATCAAGTTTAAGT 397507717 66309 NM_000059.3(BRCA2):c.439C>T (p.Gln147Ter) BRCA2 Sep 08, 2016 MedGen:C2675520,OMIM:612555 Breast-ovarian cancer, familial 2 germline 13 32326114 GCTTTGTTTTATTTTAGTCCTGTTGTTCTACAATGTACACATGTAACACCACAAAGAGATA 63750666 23887 NM_000447.2(PSEN2):c.1289C>T (p.Thr430Met) PSEN2 Aug 01, 2003 MedGen:C1847200,OMIM:606889;MedGen:CN517202 Alzheimer disease, type 4;not provided germline 1 226895521 TCACGTTCGGGCTCATCTTTTACTTCTCCACGGACAACCTGGTGCGGCCGTTCATGGACAC 397508002 67326 NM_000059.3(BRCA2):c.8680C>T (p.Gln2894Ter) BRCA2 Nov 01, 2017 MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Familial cancer of breast;Hereditary cancer-predisposing syndrome;not provided germline 13 32376717 TATTTACCATCACGTGCACTAACAAGACAGCAAGTTCGTGCTTTGCAAGATGGTGCAGAGC 886041781 264026 NM_001029882.3(AHDC1):c.2908C>T (p.Gln970Ter) AHDC1 May 13, 2016 MedGen:CN517202 not provided germline 1 27549208 ACCCACCCGCCTGCCAACACCTACCTGCCCCAGTACGGCGGCTATGGGGCCGGACAAAGCG 766862122 481823 NM_017780.3(CHD7):c.6199C>T (p.Gln2067Ter) CHD7 Jan 29, 2018 MedGen:CN517202 not provided germline 8 60852924 CGCATTGAGCTGCTACGGAAGATCCGCGAGCAGGTTCTCCATCACCCCCAGCTGGGAGAGA 387906692 38862 NM_002734.4(PRKAR1A):c.1102C>T (p.Arg368Ter) PRKAR1A Apr 06, 2012 MedGen:C3276228,OMIM:101800 Acrodysostosis 1 with or without hormone resistance germline 17 68530405 GTTCTTGGCCCATGCTCAGACATCCTCAAACGAAACATCCAGCAGTACAACAGTTTTGTGT 758775001 272150 NM_000426.3(LAMA2):c.5116C>T (p.Arg1706Ter) LAMA2 Aug 10, 2017 MedGen:CN117977;MedGen:C1263858,OMIM:607855,Orphanet:ORPHA258,SNOMED CT:111503008 Laminin alpha 2-related dystrophy;Merosin deficient congenital muscular dystrophy germline 6 129391535 GCTATAAAACTAAATGAAACTCTAGGAACTCGAGACGAGGCCTTTGAGAGAAATTTGGAAG 773684291 214363 NM_017777.3(MKS1):c.1208C>T (p.Ser403Leu) MKS1 Sep 01, 2016 Human Phenotype Ontology:HP:0002335,MedGen:C0431399,Orphanet:ORPHA475,SNOMED CT:253175003,SNOMED CT:716997004;MedGen:CN517202 Joubert syndrome;not provided germline;unknown 17 58207959 AGTGGCCTGTGCTCTACTGTGAGGTCCTCTCGCTGGACTTCTGGCAGAGGTACCGTGTGGA 121434572 31609 NM_000123.3(ERCC5):c.787C>T (p.Arg263Ter) ERCC5 Apr 01, 1997 MedGen:C1968561 Xeroderma pigmentosum group g/Cockayne syndrome germline 13 102861621 GAAATGAATCAGCAACATTCAGGACACATCCGAAGGCAGTATGAAGATGAAGGGGGCTTTC 398123929 100476 NM_004006.2(DMD):c.3151C>T (p.Arg1051Ter) DMD Feb 03, 2017 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009;MedGen:C3668940,OMIM:302045;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Becker muscular dystrophy;Dilated cardiomyopathy 3B;Duchenne muscular dystrophy germline X 32468509 CAAAAGCTAGAGGAGCAAATGAATAAACTCCGAAAAATTCAGGTAATTCAAGATTTTACTT 141210410 439707 NM_005956.3(MTHFD1):c.517C>T (p.Arg173Cys) MTHFD1 Nov 21, 2017 MedGen:CN635903,OMIM:617780 COMBINED IMMUNODEFICIENCY AND MEGALOBLASTIC ANEMIA WITH OR WITHOUT HYPERHOMOCYSTEINEMIA germline 14 64417926 ATTGCCGGAAGGCATGCTGTGGTGGTTGGGCGCAGTAAAATAGTTGGGGCCCCGATGCATG 397514585 48368 NM_001866.2(COX7B):c.55C>T (p.Gln19Ter) COX7B Dec 10, 2012 MedGen:C3550921,OMIM:300887 Linear skin defects with multiple congenital anomalies 2 germline X 77902657 TTCGTTTTCCTGTAAGTTCGAAGCATTCAGCAAACAATGGCAAGGCAGAGCCACCAGAAAC 796052117 200885 NM_031924.5(RSPH3):c.616C>T (p.Gln206Ter) RSPH3 Jul 02, 2015 MedGen:C4225311,OMIM:616481 Ciliary dyskinesia, primary, 32 germline 6 158993853 AGGGTAATTCGAGGTAACACTTATGCACTCCAGACAGGGCCACTGGTAAGTTCAGTTTGAA 199472724 67774 NM_000218.2(KCNQ1):c.794C>T (p.Thr265Ile) KCNQ1 Jun 28, 2012 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MedGen:CN517202 Congenital long QT syndrome;not provided germline 11 2572859 TGTGTTTTCTGGCCTAGGAGCTGATAACCACCCTGTACATCGGCTTCCTGGGCCTCATCTT 397508461 68268 NM_000492.3(CFTR):c.292C>T (p.Gln98Ter) CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline;unknown 7 117530917 CCCCTTTTGTAGGAAGTCACCAAAGCAGTACAGCCTCTCTTACTGGGAAGAATCATAGCTT 786204815 187166 NM_014795.3(ZEB2):c.1027C>T (p.Arg343Ter) ZEB2 Mar 02, 2015 MedGen:C1856113,OMIM:235730,Orphanet:ORPHA2152 Mowat-Wilson syndrome germline;unknown 2 144400160 AAATGTATTGGTTTAATCTCTGTAAATGGCCGAATGAGAAACAATATCAAGACGGGTTCTT 118204053 15784 NM_001080522.2(CC2D2A):c.2848C>T (p.Arg950Ter) CC2D2A Feb 23, 2015 MedGen:C2676788,OMIM:612285 Joubert syndrome 9 germline;unknown 4 15559183 TTTTAATTTTAGGACTATGAGAAACGGTTACGAGACAGAAATGTAATAGAAACCAAGGAAC 5030825 420456 NM_000551.3(VHL):c.583C>T (p.Gln195Ter) VHL Dec 06, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 3 10149906 TACGAAGATCTGGAAGACCACCCAAATGTGCAGAAAGACCTGGAGCGGCTGACACAGGAGC 386134263 45326 NM_000475.4(NR0B1):c.1141C>T (p.Leu381Phe) NR0B1 Sep 20, 2017 MedGen:C0342482,OMIM:300200,SNOMED CT:237764004 Congenital adrenal hypoplasia, X-linked germline X 30308223 CTGAACATCAGTACCAAGGAGTACGCCTACCTCAAGGGGACCGTGCTCTTTAACCCGGGTA 200731870 442935 NM_001271208.1(NEB):c.25441C>T (p.Arg8481Ter) NEB Sep 01, 2017 MedGen:CN517202 not provided germline 2 151490039 CATGCAAAAACCACAGAGCTCCCACAACAACGATCATCTTCAGTTGCTACCCAACAGACAA 398123061 76995 NM_012160.4(FBXL4):c.1444C>T (p.Arg482Trp) FBXL4 Aug 10, 2017 Human Phenotype Ontology:HP:0001263,MedGen:C4020875;MedGen:C3809592,OMIM:615471,Orphanet:ORPHA369897;MedGen:C0162666,SNOMED CT:447292006;MedGen:CN517202 Global developmental delay;Mitochondrial DNA depletion syndrome 13 (encephalomyopathic type);Mitochondrial encephalomyopathy;not provided germline 6 98875673 AGCATGATAGGAGCCAAGTGTAAAAAACTCCGGACCCTGGATCTGTGGAGATGTAAGAATA 587784107 168170 NM_022455.4(NSD1):c.3964C>T (p.Arg1322Ter) NSD1 Apr 25, 2017 MedGen:CN035106,OMIM:117550;MedGen:CN517202 Sotos syndrome 1;not provided germline 5 177238279 TGTGAAGAGGAAAGCCTTCTAGCCCGAGGTCGATCTAGTGCTCAGAACAAGCAGGTGGACG 149660944 181559 NM_001127895.1(CHST8):c.229C>T (p.Arg77Trp) CHST8 Apr 01, 2012 MedGen:C4015729,OMIM:616265,Orphanet:ORPHA263548 Peeling skin syndrome 3 germline 19 33772017 GACTTGAAGGAACCCACAGAGAGGGTCACTCGGGACTTATCCAGTGGGGCCCCGAGGGGCC 121912608 17032 NM_182896.2(ARL13B):c.598C>T (p.Arg200Cys) ARL13B Feb 23, 2015 MedGen:C2676771,OMIM:612291 Joubert syndrome 8 germline;unknown 3 94036663 ATTGCAAGAGACTTTGATGCCTTAAATGAACGCATCCAAAAAGAGACAACAGAGCAGCGTG 72554304 103261 NM_000531.5(OTC):c.94C>T (p.Gln32Ter) OTC - MedGen:CN517202 not provided unknown X 38367307 ATCTCTTTTTACAGGTGTGGACAACCACTACAAAATAAAGTGCAGCTGAAGGGCCGTGACC 80358757 66510 NM_000059.3(BRCA2):c.5344C>T (p.Gln1782Ter) BRCA2 Apr 22, 2016 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome germline 13 32339699 ATTGAGCCAGTATTGAAGAATGTTGAAGATCAAAAAAACACTAGTTTTTCCAAAGTAATAT 199422195 34487 NM_018136.4(ASPM):c.9730C>T (p.Arg3244Ter) ASPM Aug 08, 2016 MedGen:C1837501,OMIM:608716;MedGen:CN517202 Primary autosomal recessive microcephaly 5;not provided germline 1 197090295 CTAAGTCTTCAAGTTGTTAATAGGGAGATTCGAGAAGAAAACAAACTCTACAAAAGAACTG 550254092 262353 NM_004937.2(CTNS):c.382C>T (p.Gln128Ter) CTNS Oct 06, 2016 MedGen:CN035091,Orphanet:ORPHA213,SNOMED CT:190681003 Cystinosis germline 17 3655273 ATCCGCAGCAGCGCCATTAGCATCATAAACCAGGTGATTGGCTGGATCTACTTTGTGGCCT -1 427481 NM_001009944.2(PKD1):c.6307C>T (p.Gln2103Ter) PKD1 Jun 17, 2016 MedGen:C0085548,OMIM:263200,Orphanet:ORPHA731,SNOMED CT:28770003 Autosomal recessive polycystic kidney disease germline 16 2108860 CACTGGGACTTTGGGGATGGGTCGCCAGGGCAGGACACAGATGAGCCCAGGGCCGAGCACT 869025660 224953 NM_000551.3(VHL):c.470C>T (p.Thr157Ile) VHL Feb 26, 2016 MedGen:C0019562,OMIM:193300,Orphanet:ORPHA892,SNOMED CT:46659004 Von Hippel-Lindau syndrome germline 3 10149793 AGGATTTGGTTTTTGCCCTTCCAGTGTATACTCTGAAAGAGCGATGCCTCCAGGTTGTCCG 387907267 45725 NM_000256.3(MYBPC3):c.2827C>T (p.Arg943Ter) MYBPC3 Nov 03, 2017 MedGen:CN230736;MedGen:C1861862,OMIM:115197;Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Cardiovascular phenotype;Familial hypertrophic cardiomyopathy 4;Hypertrophic cardiomyopathy;Primary familial hypertrophic cardiomyopathy;not provided germline 11 47335120 GACCTGCCCACGGGGGCCCGGCTGCTTTTCCGAGTGCGGGCACACAATATGGCAGGGCCTG 1060502054 397976 NM_005097.3(LGI1):c.688C>T (p.Gln230Ter) LGI1 Dec 20, 2016 MedGen:C1838062,OMIM:600512,Orphanet:ORPHA101046 Epilepsy, lateral temporal lobe, autosomal dominant germline 10 93793200 TTTCCTATTTTTGCAGAATTTGCAAAGTCTCAAGACCTGCCTTATCAATCATTGTCCATAG 886039268 259372 NM_001242896.1(DEPDC5):c.3802C>T (p.Arg1268Ter) DEPDC5 Apr 13, 2016 Gene:50987,MedGen:C1858477,OMIM:604364 Epilepsy, familial focal, with variable foci 1 germline 22 31876262 TACAAGATAGTAACGGACAAAGAGCCCGACCGAGGTTAGAGCCGAGGCGAATGCGGTTGCC 80358998 67063 NM_000059.3(BRCA2):c.772C>T (p.Gln258Ter) BRCA2 May 11, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome germline 13 32331009 GCTTCTGTGACAGACAGTGAAAACACAAATCAAAGAGAAGCTGCAAGTCATGGTAAGTCCT 587779398 106585 NM_000147.4(FUCA1):c.464C>T (p.Ser155Phe) FUCA1 - MedGen:C0016788,OMIM:230000,Orphanet:ORPHA349,SNOMED CT:64716005 Fucosidosis inherited 1 23865551 GGCCGAGTCCTGTGTCTTGGAACTGGAACTCCAAAGACGTGGGGCCTCATCGGGATTTGGT 121908651 21348 NM_030761.4(WNT4):c.341C>T (p.Ala114Val) WNT4 Jan 01, 2008 MedGen:C2678492,OMIM:611812,Orphanet:ORPHA139466 Serkal syndrome germline 1 22121549 CAGGGACTCGGGAGGCGGCCTTCGTGTACGCCATCTCTTCGGCAGGTGTGGCCTTTGCAGT 387906223 15312 NM_173546.2(KLHDC8B):c.-158C>T KLHDC8B Sep 01, 2009 Human Phenotype Ontology:HP:0012189,MedGen:C0019829,OMIM:236000,Orphanet:ORPHA98293 Hodgkin lymphoma germline 3 49171662 CAACGGAGGCGGAACGGCGGACCCCGTACCCTGGCAGCATCGGAGCACCGGCGGGTGAGTC 61748550 104925 NM_000350.2(ABCA4):c.1222C>T (p.Arg408Ter) ABCA4 May 15, 2017 MedGen:C3495438,OMIM:153800;MedGen:C1858806,OMIM:604116;MedGen:C1866422,OMIM:601718;MeSH:C535804,MedGen:C1855465,OMIM:248200;MedGen:CN517202 Age-related macular degeneration 2;Cone-rod dystrophy 3;Retinitis pigmentosa 19;Stargardt disease 1;not provided germline 1 94079339 ATCCTGTACACTCCTGATTCACCTGCAGCACGAAGGATACTGAAGAATGTAAGATCCCAGC 121918279 17511 NM_207122.1(EXT2):c.514C>T (p.Gln172Ter) EXT2 Mar 16, 2016 MedGen:C1851413,OMIM:133701;MedGen:CN517202 Multiple exostoses type 2;not provided germline 11 44108226 CAGAACACACTGCGCATCAAGGAGACAGCACAAGCGATGGCCCAGCTCTCTAGGTATCTCA 45472701 59112 NM_000548.4(TSC2):c.5170C>T (p.Gln1724Ter) TSC2 Jan 20, 2015 MedGen:C1860707,OMIM:613254;MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000 Tuberous sclerosis 2;Tuberous sclerosis syndrome germline 16 2088236 ACCCCCTGCCTACGTCCCCAGATGGCCTCACAGGTGCATCATAGCCGCTCCAACCCCACCG 886041158 263993 NM_024529.4(CDC73):c.226C>T (p.Arg76Ter) CDC73 Oct 20, 2016 MedGen:CN517202 not provided germline 1 193125206 AACGTGCACCTTTCTCATCCTGTTTATGTCCGACGTGCAGCTGTAAGTAGAATTCATTTTA 1057524308 364430 NM_020699.3(GATAD2B):c.1045C>T (p.Gln349Ter) GATAD2B Jan 11, 2017 MedGen:CN517202 not provided germline 1 153816444 CCCAGCGCCATGACTGATGCTGCCAACTCACAGGCTGCAGCCAAATTGGCTCTTCGCAAAC 45517352 58468 NM_000548.4(TSC2):c.4573C>T (p.Gln1525Ter) TSC2 Nov 20, 2014 MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000;MedGen:CN517202 Tuberous sclerosis syndrome;not provided germline 16 2085233 GCTCAGGCAGGGCTCTGTGTGCCACAGTCACAGTCCTTTGAGCGGTCGGTGCAGCTCCTCG 104894563 27038 NM_000151.3(G6PC):c.883C>T (p.Arg295Cys) G6PC Jul 08, 2016 MedGen:C2919796,OMIM:232200;MedGen:C0017920,SNOMED CT:7265005 Glycogen storage disease type 1A;Glycogen storage disease, type I germline;unknown 17 42911235 AAGGGGAAACTCAGCAAGTGGCTCCCATTCCGCCTCAGCTCTATTGTAGCCTCCCTCGTCC 72653776 426994 NM_001171.5(ABCC6):c.1781C>T (p.Ala594Val) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16187210 TGGGTGACCTGCGGCTTCGGTTTTCCTAGGCCCGGGTGTCCTTTGACCGTCTGGTCACCTT 1085307634 415540 NM_002615.6(SERPINF1):c.295C>T (p.Arg99Ter) SERPINF1 Apr 16, 2017 MedGen:CN517202 not provided germline 17 1771040 ACATCCTTGTCTCTGGCAGGAGCGGAGCAGCGAACAGAATCCATCATTCACCGGGCTCTCT 587783510 169210 NM_004380.2(CREBBP):c.6088C>T (p.Gln2030Ter) CREBBP Feb 08, 2013 MedGen:C0035934,OMIM:180849,Orphanet:ORPHA353277,SNOMED CT:45582004 Rubinstein-Taybi syndrome germline 16 3728959 CAGTGGCAGCAGGCGCCCCTTCCCCAGCAGCAGCCCATGCCAGGCTTGCCCAGGCCTGTGA 376603775 244622 NM_000051.3(ATM):c.5623C>T (p.Arg1875Ter) ATM Sep 18, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Ataxia-telangiectasia syndrome;Hereditary cancer-predisposing syndrome;not provided germline 11 108304801 CATGTTCAGGGATTTTTCACCAGCTGTCTTCGACACTTCTCGCAAACGAGCCGATCCACAA 118192194 34639 NM_172107.3(KCNQ2):c.365C>T (p.Ser122Leu) KCNQ2 Oct 11, 2017 MedGen:C1852587,OMIM:121200;MedGen:CN517202 Benign familial neonatal seizures 1;not provided germline 20 63446769 TTTCCACCATCAAGGAGTATGAGAAGAGCTCGGAGGGGGCCCTCTACATCCTGGTGAGCCC 121908063 19193 NM_000173.6(GP1BA):c.217C>T (p.Leu73Phe) GP1BA Jan 15, 1992 MedGen:C2750610,OMIM:153670 Bernard-Soulier syndrome, type A2, autosomal dominant germline 17 4932821 TCCCTGGCAACCCTGATGCCTTACACTCGCCTCACTCAGCTGAACCTAGATAGGTGCGAGC 72645318 260186 NM_000088.3(COL1A1):c.757C>T (p.Arg253Ter) COL1A1 Aug 15, 2016 MedGen:CN517202 not provided germline 17 50197057 CTTGTCTTCTTCATCTCTCTCCAGGGTGCTCGAGGATTGCCCGGAACAGCTGGCCTCCCTG 397514689 59369 NM_000789.3(ACE):c.2371C>T (p.Arg791Ter) ACE Jun 14, 2017 Human Phenotype Ontology:HP:0008660,MedGen:C0266313,OMIM:267430,SNOMED CT:204949001;MedGen:CN517202 Renal dysplasia;not provided germline 17 63488713 GAAGACCTGTTATGGGCATGGGAGGGCTGGCGAGACAAGGCGGGGAGAGCCATCCTCCAGT 767716511 455020 NM_001369.2(DNAH5):c.13426C>T (p.Arg4476Ter) DNAH5 Apr 04, 2017 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244 Ciliary dyskinesia germline 5 13701349 AGCCAGTTTACCTCGTGGGTTTTCAATGGCCGACCTCACTGCTTTTGGATGACGGGTTTTT -1 433113 NM_000020.2(ACVRL1):c.1355C>T (p.Pro452Leu) ACVRL1 Aug 15, 2016 MedGen:CN169374 not specified germline 12 51919093 TGTGTGTGGATCAGCAGACCCCCACCATCCCTAACCGGCTGGCTGCAGACCCGGTGAGGCC 727505006 176130 NM_000138.4(FBN1):c.3373C>T (p.Arg1125Ter) FBN1 Dec 19, 2017 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:CN118826,Orphanet:ORPHA91387;MedGen:CN517202 Marfan syndrome;Marfan syndrome;Thoracic aortic aneurysm and aortic dissection;not provided germline 15 48487402 GATGAGTGTCAGAGAGATCCTCTCCTATGCCGAGGTGGTGTTTGCCATAACACAGAGGGAA 267608525 153428 NM_004992.3(MECP2):c.784C>T (p.Gln262Ter) MECP2 Oct 10, 2013 MedGen:C0035372,OMIM:312750,Orphanet:ORPHA778,SNOMED CT:68618008 Rett syndrome germline;unknown X 154031044 GGCAGGAAGCGAAAAGCTGAGGCCGACCCTCAGGCCATTCCCAAGAAACGGGGCCGAAAGC 111033613 25153 NM_000132.3(F8):c.5122C>T (p.Arg1708Cys) F8 May 01, 1992 na;MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 FACTOR VIII (EAST HARTFORD);Hereditary factor VIII deficiency disease germline X 154928668 ATTTATGATGAGGATGAAAATCAGAGCCCCCGCAGCTTTCAAAAGAAAACACGACACTATT 63749849 96029 NM_000251.2(MSH2):c.1147C>T (p.Arg383Ter) MSH2 Oct 03, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0009405,Orphanet:ORPHA443090;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:C2936783,OMIM:120435;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Hereditary nonpolyposis colon cancer;Lynch syndrome;Lynch syndrome I;not provided germline;unknown 2 47429812 AGGCAGACTTTACAAGAAGATTTACTTCGTCGATTCCCAGATCTTAACCGACTTGCCAAGA 121908476 20850 NM_139025.4(ADAMTS13):c.1345C>T (p.Gln449Ter) ADAMTS13 Sep 03, 2002 MedGen:C1268935,OMIM:274150,Orphanet:ORPHA93583,SNOMED CT:373420004 Upshaw-Schulman syndrome germline 9 133436865 GAGAAGACCCAGCTGGAGTTCATGTCGCAACAGTGCGCCAGGACCGACGGCCAGCCGCTGC 137852517 25052 NM_000216.3(ANOS1):c.1187C>T (p.Ser396Leu) ANOS1 Oct 20, 2006 MedGen:C1563719,OMIM:308700 Kallmann syndrome 1 germline X 8568252 AGAGTGCAAAGGTGTCCCTTCACTTCACATCGACACATGCAACCAACAACAGTAAGTGACT 1114167629 419717 NM_000314.6(PTEN):c.328C>T (p.Gln110Ter) PTEN Feb 23, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1959582,OMIM:601728,Orphanet:ORPHA306498 Hereditary cancer-predisposing syndrome;PTEN hamartoma tumor syndrome germline 10 87933087 CTTATCAAACCCTTTTGTGAAGATCTTGACCAATGGCTAAGTGAAGATGACAATCATGTTG 61199332 27360 NC_000008.11:g.11573132C>T BLK Aug 25, 2009 MedGen:C3150618,OMIM:613375 Maturity-onset diabetes of the young, type 11 germline 8 11573132 CATTAAACACTTGGCCCAACTCCACCCACACATCACCCCTGAGATTAAGAAAGTGCTCTCA 886041930 265138 NM_000194.2(HPRT1):c.202C>T (p.Leu68Phe) HPRT1 Aug 17, 2016 MedGen:CN517202 not provided germline X 134475248 GGAGGCCATCACATTGTAGCCCTCTGTGTGCTCAAGGGGGGCTATAAATTCTTTGCTGACC 63750459 21608 NM_001171.5(ABCC6):c.3389C>T (p.Thr1130Met) ABCC6 Jan 01, 2015 Human Phenotype Ontology:HP:0000478,MedGen:C4316870;MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Abnormality of the eye;Pseudoxanthoma elasticum germline;unknown 16 16163110 ACTCGTCTGTCTGCTCCCACATGGCTGAGACGTTCCAGGGCAGCACAGTGGTCCGGGCATT 747372355 234309 NM_000051.3(ATM):c.7189C>T (p.Gln2397Ter) ATM Aug 10, 2015 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 11 108329120 TTTCTCTCATTAGCCCGGTTTTCAGATACTCAATACCAAAGAATTGAAAACTACATGAAAT 769266169 203488 NM_018129.3(PNPO):c.673C>T (p.Arg225Cys) PNPO May 04, 2015 MedGen:CN517202 not provided germline 17 47946669 GTGATGGAGTTCTGGCAAGGTCAAACCAACCGCCTGCATGACCGGATAGTCTTTCGGCGGG -1 485622 NM_000038.5(APC):c.3577C>T (p.Gln1193Ter) APC - MedGen:CN517202 not provided unknown 5 112839171 TATGCCACAGATATTCCTTCATCACAGAAACAGTCATTTTCATTCTCAAAGAGTTCATCTG 886039763 227575 NM_001032393.2(HNRNPH2):c.616C>T (p.Arg206Trp) HNRNPH2 Nov 16, 2017 MedGen:C4310814,OMIM:300986;MedGen:CN517202 Mental retardation, X-linked, syndromic, Bain type;not provided de novo;germline X 101412604 GATCCCCCTCGAAAGCTCATGGCTATGCAGCGGCCAGGTCCCTATGATAGGCCGGGGGCTG 121917863 21561 NM_007035.3(KERA):c.937C>T (p.Arg313Ter) KERA Jun 01, 2004 MedGen:C1857574,OMIM:217300 Cornea plana 2 germline 12 91051468 TGTCCCAGCCCATCCATGCTGCCTGCAGAACGAGATTCCTTCAGTTATGGACCTCATCTTC 137853113 16048 NM_001031710.2(KLHL7):c.458C>T (p.Ala153Val) KLHL7 Aug 16, 2013 MedGen:C2751986,OMIM:612943;MedGen:CN517202 Retinitis pigmentosa 42;not provided germline 7 23140784 TCTTTCTGTGTTTAGGTATAAGTGTGCTAGCGGAGTGTCTAGATTGTCCTGAATTGAAAGC 121908687 21243 NM_003560.3(PLA2G6):c.2239C>T (p.Arg747Trp) PLA2G6 Sep 11, 2014 MedGen:C2751842,OMIM:612953,Orphanet:ORPHA199351 Parkinson disease 14 germline 22 38112541 GATCCAGACGGGCGGGCTGTGGACCGGGCACGGGCCTGGTGCGAGATGGTCGGCATCCAGT 120074189 18177 NM_000218.2(KCNQ1):c.1760C>T (p.Thr587Met) KCNQ1 Jul 05, 2017 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MedGen:CN034131,OMIM:220400;MeSH:D008133,MedGen:C0023976,SNOMED CT:9651007;MedGen:CN517202 Congenital long QT syndrome;Jervell and Lange-Nielsen syndrome 1;Long QT syndrome;not provided germline 11 2778003 TAGAAAAGAGCAAGGATCGCGGCAGCAACACGATCGGCGCCCGCCTGAACCGAGTAGAAGA 267607146 20041 NM_021625.4(TRPV4):c.805C>T (p.Arg269Cys) TRPV4 Oct 05, 2016 MedGen:C0007959,Orphanet:ORPHA166,SNOMED CT:50548001;MedGen:C2079540,OMIM:606071;Gene:8094,MedGen:C1838492,OMIM:600175,Orphanet:ORPHA1216;MedGen:C0027868,Orphanet:ORPHA68381;MedGen:C0751335,OMIM:181405,Orphanet:ORPHA431255,SNOMED CT:230248006;MedGen:CN517202 Charcot-Marie-Tooth disease;Charcot-Marie-Tooth disease type 2C;Distal spinal muscular atrophy, congenital nonprogressive;Neuromuscular Diseases;Scapuloperoneal spinal muscular atrophy;not provided germline 12 109800666 GCCCAGGGAGCTGATGTCCACGCCCAGGCCCGTGGGCGCTTCTTCCAGCCCAAGGATGAGG 863223678 210339 NM_000214.2(JAG1):c.544C>T (p.Gln182Ter) JAG1 Jun 18, 2015 MedGen:CN517202 not provided germline 20 10658618 CAGAACACGGGCGTTGCCCACTTTGAGTATCAGATCCGCGTGACCTGTGATGACTACTACT 864321707 217258 NM_172107.3(KCNQ2):c.917C>T (p.Ala306Val) KCNQ2 May 16, 2017 MedGen:C0393706,Orphanet:ORPHA1934;MedGen:C3150986,OMIM:613720,Orphanet:ORPHA439218 Early infantile epileptic encephalopathy;Early infantile epileptic encephalopathy 7 de novo;germline 20 63439608 CCTTCACCCTCATCGGTGTCTCCTTCTTCGCGCTGCCTGCAGTAAGTCCAGCTGCCCCTGC 398123001 97544 NM_078480.2(PUF60):c.505C>T (p.His169Tyr) PUF60 Nov 07, 2013 MedGen:C3810023,OMIM:615583 Verheij syndrome germline 8 143818378 GACATGTCCTGGGACTCCGTCACCATGAAGCACAAGGTCAGCAGGCTTGGTCCGCCCCGGC 387906632 38674 NM_001145661.1(GATA2):c.1009C>T (p.Arg337Ter) GATA2 Sep 04, 2011 MedGen:C3279664,OMIM:614038,Orphanet:ORPHA3226 Lymphedema, primary, with myelodysplasia germline 3 128483868 GGGCAGAACCGACCACTCATCAAGCCCAAGCGAAGACTGGTAGGAGCGGGCACAGGTGGCT 879254578 245639 NM_000527.4(LDLR):c.571C>T (p.Gln191Ter) LDLR Mar 25, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11105477 CCGCAGCGCTGTAGGGGTCTTTACGTGTTCCAAGGGGACAGTAGCCCCTGCTCGGCCTTCG 118204030 16533 NM_001039141.2(TRIOBP):c.3202C>T (p.Arg1068Ter) TRIOBP Jan 01, 2006 MedGen:C1853276,OMIM:609823 Deafness, autosomal recessive 28 germline 22 37725758 TATATACCACCTGCTGTGTGCATTGGACACCGAGATGCCCCCCGGGCGTCCTCGCCCCCCC 104895300 48324 NM_000431.3(MVK):c.500C>T (p.Pro167Leu) MVK Dec 23, 2016 MedGen:C0398691,OMIM:260920,Orphanet:ORPHA343,SNOMED CT:234538002;MedGen:CN517202 Hyperimmunoglobulin D with periodic fever;not provided germline 12 109581523 TCCTGACTGTGTGCGAGGAGATCCCAAACCCGCTGAAGGACGGGGATTGCGTCAACAGGTA 886040983 262646 NM_017780.3(CHD7):c.2959C>T (p.Arg987Ter) CHD7 Sep 05, 2016 MedGen:C0265354,OMIM:214800,Orphanet:ORPHA138,SNOMED CT:47535005;MedGen:CN517202 CHARGE association;not provided germline 8 60822504 AACTTTTGTACTTCATTTTCCTCCTAAAGGCGAAACTGCATTTTAGCAGATGAAATGGGTT 587783460 169264 NM_004380.2(CREBBP):c.1063C>T (p.Gln355Ter) CREBBP Feb 08, 2013 MedGen:C0035934,OMIM:180849,Orphanet:ORPHA353277,SNOMED CT:45582004 Rubinstein-Taybi syndrome germline 16 3793539 ACTGCAGATCCTGAAAAACGCAAACTGATACAGCAGCAGCTGGTTCTACTGCTTCATGCTC 886042229 265982 NM_005859.4(PURA):c.367C>T (p.Gln123Ter) PURA Jul 09, 2015 MedGen:C4015357,OMIM:616158 Mental retardation, autosomal dominant 31 germline 5 140114548 TACCTGGGCGACTTCATCGAGCACTACGCGCAGCTGGGCCCCAGCCAGCCGCCGGACCTGG 104894266 31729 NM_130799.2(MEN1):c.778C>T (p.Gln260Ter) MEN1 Jan 27, 2016 MedGen:C0027672,SNOMED CT:699346009;MeSH:D018761,MedGen:C0025267,OMIM:131100,Orphanet:ORPHA652,SNOMED CT:30664006 Hereditary cancer-predisposing syndrome;Multiple endocrine neoplasia, type 1 germline 11 64807557 CACACCGACTCGCTGGAGCTTCTGCAGCTGCAGCAGGTGAGGGCTGAGCCAATGGGGCAGG 758304537 200655 NM_138413.3(HOGA1):c.208C>T (p.Arg70Ter) HOGA1 Nov 27, 2014 MedGen:C3150878,OMIM:613616,Orphanet:ORPHA93600 Primary hyperoxaluria, type III germline 10 97584911 AATCTGCACAAACTGGGCACCTTCCCCTTCCGAGGTAAGTGGGGCTGTCCTCTGTGGGACC 1064794259 410434 NM_000527.4(LDLR):c.1439C>T (p.Ala480Val) LDLR Feb 21, 2017 MedGen:CN517202 not provided germline 19 11113615 GCAGAGACATCCAGGCCCCCGACGGGCTGGCTGTGGACTGGATCCACAGCAACATCTACTG -1 481851 NM_024757.4(EHMT1):c.508C>T (p.Gln170Ter) EHMT1 Jul 20, 2017 MedGen:CN517202 not provided germline 9 137717048 GGCAAAGGCAGGACTCCAAGCGCTTTTCCCCAGACGCCAGCCGCCCCACCAGCCACCCTTG 515726225 136396 NM_023110.2(FGFR1):c.2084C>T (p.Thr695Ile) FGFR1 Oct 24, 2013 MedGen:C1563720,OMIM:147950 Kallmann syndrome 2 germline 8 38414254 CTTTCGGGGTGCTCCTGTGGGAGATCTTCACTCTGGGCGGCTCCCCATACCCCGGTGTGCC 63750267 96025 NM_000251.2(MSH2):c.1129C>T (p.Gln377Ter) MSH2 Sep 05, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Hereditary cancer-predisposing syndrome;Lynch syndrome germline 2 47429794 GTAGAAGATGCAGAATTGAGGCAGACTTTACAAGAAGATTTACTTCGTCGATTCCCAGATC 548204329 411554 NM_001244008.1(KIF1A):c.31C>T (p.Arg11Trp) KIF1A Mar 07, 2017 MedGen:C0037773,Orphanet:ORPHA685,SNOMED CT:39912006 Hereditary spastic paraplegia de novo 2 240797722 ATGGCCGGGGCTTCGGTGAAGGTGGCGGTGCGGGTCCGCCCCTTCAATTCCCGGGAAATGA 104894500 21029 NM_183235.2(RAB27A):c.352C>T (p.Gln118Ter) RAB27A Jul 01, 2004 MedGen:C1868679,OMIM:607624,Orphanet:ORPHA79477 Griscelli syndrome type 2 germline 15 55224004 ATAAACTTTCTTATATTAATAGGCCAGCTACAGATGCATGCATATTGTGAAAACCCAGATA 1057518906 360861 NM_000297.3(PKD2):c.145C>T (p.Gln49Ter) PKD2 Jun 23, 2015 Human Phenotype Ontology:HP:0000113,MedGen:C0022680 Polycystic kidney dysplasia unknown 4 88007878 AGCCTCGCCGCCCCGGGCGGCCTCTGCGAGCAGCGGGGCCTGGAGATCGAGATGCAGCGCA 786205174 187989 NM_000124.3(ERCC6):c.3904C>T (p.Gln1302Ter) ERCC6 Jul 29, 2014 MedGen:C0751038,OMIM:133540,Orphanet:ORPHA90322 Cockayne syndrome B germline 10 49461431 GATGCCCTGAAAGCACTGAGGCTCTCTCGTCAGCGGTGTCTGGGAGCAGTGTCTGGTGTTC 1057519493 362181 NM_033004.3(NLRP1):c.197C>T (p.Ala66Val) NLRP1 Feb 27, 2017 Gene:107988031,MedGen:C3808876,OMIM:615225,OMIM:616964;MedGen:CN517202 Palmoplantar carcinoma, multiple self-healing;not provided germline 17 5583761 ACCTGGTGGCTCAGTATGGGGAGCAGCGGGCCTGGGACCTAGCCCTCCATACCTGGGAGCA 754768875 481582 NM_206933.2(USH2A):c.4957C>T (p.Arg1653Ter) USH2A Jan 19, 2018 MedGen:CN517202 not provided germline 1 216086749 AACACAGGAGTCTTTCTGGGAGGGCTCCCGCGAAGTTATACCATCCTCAGGAAGGATCCTG 1114167619 419686 NM_000368.4(TSC1):c.2530C>T (p.Gln844Ter) TSC1 Jun 20, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 9 132900810 TAGCTCTCAAACAGTGAGTCGGTCCAGCAGCAGATGGAGTTCTTGAACAGGCAGCTGTTGG -1 443926 NM_020732.3(ARID1B):c.4741C>T (p.Gln1581Ter) ARID1B Oct 24, 2017 MedGen:CN517202 not provided germline 6 157201335 AAGTCTCCTTTTCTGCCGTCTATGAAGATGCAGAAGGTCATGCCCACGGTCCCCACATCCC 796053366 202308 NM_003165.3(STXBP1):c.1099C>T (p.Arg367Ter) STXBP1 Jun 02, 2017 MedGen:C0393706,Orphanet:ORPHA1934;Human Phenotype Ontology:HP:0200134,MedGen:C0543888;MedGen:CN517202 Early infantile epileptic encephalopathy;Epileptic encephalopathy;not provided de novo;germline 9 127673250 CATTACCAAGGCACCGTAGACAAACTCTGCCGAGTGGAGCAGGTAGGACTCTCCTTCTGCC 370424081 185742 NM_173167.3(UNC45B):c.2413C>T (p.Arg805Trp) UNC45B Nov 01, 2014 MedGen:C4225389,OMIM:616279 Cataract 43 germline 17 35183460 CAGGAAAGGTTCTTGGCTGACGGGAATGACCGGCTGAAGCTGGTGGTGCTGCTCTGCGGGG 63751112 426815 NM_001171.5(ABCC6):c.4036C>T (p.Pro1346Ser) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16154878 CACACACTGCGCTCCAGGATCAGCATCATCCCCCAGGTGAGGCTGGTGGAGGGGGTGGGCA 587777777 166143 NM_058179.3(PSAT1):c.536C>T (p.Ser179Leu) PSAT1 Sep 04, 2014 MedGen:C4015019,OMIM:616038 Neu-laxova syndrome 2 germline 9 78306452 AGGGAGCAGTACTGGTTTGTGACATGTCCTCAAACTTCCTGTCCAAGCCAGTGGATGTTTC 724159997 172109 NM_020461.3(TUBGCP6):c.3163C>T (p.His1055Tyr) TUBGCP6 Jan 12, 2015 MedGen:C1855056,OMIM:251270 Microcephaly with chorioretinopathy, autosomal recessive germline 22 50221196 CCCACCCGGCCACGGTGGAACACCCACGGGCACGTGTCTGACGCCAGCATCAGGGTCGGGG 387907112 40073 NM_015175.2(NBEAL2):c.2701C>T (p.Arg901Ter) NBEAL2 Jul 17, 2011 MedGen:C0272302,OMIM:139090,SNOMED CT:51720005 Gray platelet syndrome germline 3 46997310 GGTATGGGTGCCCTGCTGCCCCTGCTGGAGCGAGTAGCTGCACAGCCCAAAGAGGCTGAAG 368593151 40248 NM_001101426.3(ISPD):c.802C>T (p.Arg268Ter) ISPD May 01, 2012 MedGen:C3553330,OMIM:614643 Congenital muscular dystrophy-dystroglycanopathy with brain and eye anomalies, type A7 germline 7 16301454 AGTTTATCTGTCCTTTAGGTGACCTACAAACGAGATCTCTATGCGGCTGAATCGATTATTA 137853006 20649 NM_006017.2(PROM1):c.1117C>T (p.Arg373Cys) PROM1 Mar 20, 2017 MedGen:C0339512,OMIM:608051,Orphanet:ORPHA319640,SNOMED CT:232050001;MedGen:C2675210,OMIM:612657;Human Phenotype Ontology:HP:0000556,MedGen:C0854723,Orphanet:ORPHA71862,SNOMED CT:314407005;MedGen:C1863534,OMIM:603786;MedGen:CN517202 Bull's eye macular dystrophy;Cone-rod dystrophy 12;Retinal dystrophy;Stargardt disease 4;not provided germline;unknown 4 16013299 TCCCTTAATGATATACCTGACAGAGTACAACGCCAAACCACGACTGTCGTAGCAGGTGAGA 527236135 152898 NM_206933.2(USH2A):c.2983C>T (p.Gln995Ter) USH2A - MedGen:C1848634,OMIM:276901 Usher syndrome, type 2A not provided 1 216231963 TGCAAAGACCATTACTTTGGATTTGATCCTCAGACTGGAAGGTACATCTTTATAAGCTTTA 751185256 75119 NM_015697.7(COQ2):c.1159C>T (p.Arg387Ter) COQ2 Jun 07, 2016 MedGen:CN229570,Orphanet:ORPHA35656;MedGen:C0037019,OMIM:146500,SNOMED CT:16576004 Coenzyme Q10 deficiency, primary;Shy-Drager syndrome germline 4 83264306 GAGGATTGTTGGAATAAATTTATCTCCAACCGAACACTGGGACTAATAGTTTTTTTAGGGA 104894559 32646 NM_000717.4(CA4):c.40C>T (p.Arg14Trp) CA4 Jun 14, 2016 MedGen:CN239354;MedGen:C1833245,OMIM:600852 Retinitis Pigmentosa, Dominant;Retinitis pigmentosa 17 germline 17 60150074 CTGCTGGCGCTCCTGGCCCTCTCCGCGGCGCGGCCATCGGCCAGTGCAGGTGAGCTCCCGG 1064422 29864 NM_020070.3(IGLL1):c.425C>T (p.Pro142Leu) IGLL1 Jan 05, 1998 MedGen:C3150750,OMIM:613500 Agammaglobulinemia 2, autosomal recessive germline 22 23573483 CACTGGTGTGTCTCATGAATGACTTTTATCCGGGAATCTTGACGGTGACCTGGAAGGCAGA 104893945 18471 NM_032122.4(DTNBP1):c.307C>T (p.Gln103Ter) DTNBP1 Feb 20, 2017 MedGen:C3279756,OMIM:614076,Orphanet:ORPHA231531 Hermansky-Pudlak syndrome 7 germline 6 15627391 AGCCTCGTGGAGCTGCAAGAGCAGCTCCAGCAGCTCCCAGCTTTAATCGCAGACTTAGAAT 137852714 18647 NM_024757.4(EHMT1):c.871C>T (p.Arg291Ter) EHMT1 Oct 05, 2010 MedGen:C0795833,OMIM:610253,Orphanet:ORPHA261494 Chromosome 9q deletion syndrome germline 9 137743418 TTAGCAGCTGCAGTATCTCGGAAGAAAAAACGAAGAATGGGAACCTATAGCCTGGTTCCTA 121964854 27493 NM_152263.3(TPM3):c.502C>T (p.Arg168Cys) TPM3 Apr 11, 2017 MedGen:CN178536;MedGen:C0546264,OMIM:255310,Orphanet:ORPHA2020,SNOMED CT:240084007;MedGen:CN517202 Cap myopathy 1;Congenital myopathy with fiber type disproportion;not provided de novo;germline 1 154172972 CTATACTGGGATCTTTTCCTGTAGGTGGCTCGTAAGTTGGTGATCATTGAAGGAGACTTGG 397507908 66969 NM_000059.3(BRCA2):c.7261C>T (p.Gln2421Ter) BRCA2 Sep 08, 2016 MedGen:C2675520,OMIM:612555 Breast-ovarian cancer, familial 2 germline 13 32355114 AAAACTAAATCACATTTTCACAGAGTTGAACAGTGTGTTAGGAATATTAACTTGGAGGAAA 118204032 16527 NM_178170.2(NEK8):c.1273C>T (p.His425Tyr) NEK8 Dec 15, 2012 MedGen:C3151188,OMIM:613824 Nephronophthisis 9 germline 17 28738721 TTCGGCAGCGGCAGCAATGGGTGCCTAGGCCATGGCAGCCTCACTGACATCAGCCAGGTGG 387906845 39249 NM_006015.4(ARID1A):c.2758C>T (p.Gln920Ter) ARID1A Mar 18, 2012 MedGen:C3553247,OMIM:614607 Mental retardation, autosomal dominant 14 germline 1 26766246 CTTAGGCCGCCAGGCTACCCCAATATGAATCAAGGGGGCATGATGGGAACTGGACCTCCTT 1085307772 415251 NM_001197104.1(KMT2A):c.9133C>T (p.Gln3045Ter) KMT2A Apr 06, 2017 MedGen:CN517202 not provided germline 11 118505025 CAGGTACCTGTTTCCCCAACTGTTCCCATCCAGAACCAGAAGTATGTGCCCAATTCTACTG 150832314 362581 NM_003500.3(ACOX2):c.673C>T (p.Arg225Trp) ACOX2 Feb 20, 2017 MedGen:C4310624,OMIM:617308 Bile acid synthesis defect, congenital, 6 germline 3 58531723 CGGGGCATGCACGCTTTTATTGTGCCAATCCGGAGTCTTCAGGACCACACCCCACTGCCAG 781192528 200711 NM_024741.2(ZNF408):c.1621C>T (p.Arg541Cys) ZNF408 Jul 15, 2015 MedGen:C4225315,OMIM:616469 Retinitis pigmentosa 72 germline 11 46705321 GATGCCTTCCCCCAGCTGCCTGAACTGCGGCGCCATCTCATCTCACACACCGGGGAGGCCC 886041181 265068 NM_000390.3(CHM):c.1138C>T (p.Gln380Ter) CHM Feb 16, 2016 MedGen:CN517202 not provided germline X 85956181 AACACTCCATTTTTGTTTCCTTTATATGGCCAAGGAGAACTCCCCCAGTGTTTCTGCAGGT 200495564 50200 NM_001128425.1(MUTYH):c.733C>T (p.Arg245Cys) MUTYH Aug 14, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C3272841;MedGen:C1837991,OMIM:608456,Orphanet:ORPHA247798;MedGen:CN517202 Hereditary cancer-predisposing syndrome;MUTYH-associated polyposis;MYH-associated polyposis;not provided germline 1 45332446 GTGGATGGCAACGTAGCACGGGTGCTGTGCCGTGTCCGAGCCATTGGTGCTGATCCCAGCA 146262009 206566 NM_004722.3(AP4M1):c.1012C>T (p.Arg338Ter) AP4M1 Jul 01, 2014 MedGen:C2752008,OMIM:612936 Spastic paraplegia 50, autosomal recessive germline 7 100106278 CTCAATGTCAGGCTGCACCTCCCCCTGCCTCGAGGGGTGGTCAGGTGAGTGTGTGCACCCA 368292687 76390 NM_001651.3(AQP5):c.562C>T (p.Arg188Cys) AQP5 Aug 08, 2013 MedGen:C1838359,OMIM:600231,Orphanet:ORPHA2337 Diffuse palmoplantar keratoderma, Bothnian type germline 12 49964125 TACTTCACTGGCTGCTCCATGAACCCAGCCCGCTCTTTTGGCCCTGCGGTGGTCATGAATC 786204767 187089 NM_001199752.2(CPT1C):c.109C>T (p.Arg37Cys) CPT1C Mar 27, 2015 MedGen:C4225387,OMIM:616282,Orphanet:ORPHA444099 Spastic paraplegia 73, autosomal dominant germline 19 49692361 GTGCTGCAGGAGATCTACCTCTCTGGCCTGCGCTCCTGGAAAAGGCATCTCTCACGTTTCT 121918475 28361 NM_000313.3(PROS1):c.835C>T (p.Gln279Ter) PROS1 Jan 01, 1999 MedGen:C2676728,OMIM:612336 Protein S deficiency germline 3 93898462 GGGAAGAAAGGATTCAAACTTGCCCAAGATCAGAAGAGTTGTGAGGTAAACATTTTACAAT 80356973 69370 NM_007294.3(BRCA1):c.2869C>T (p.Gln957Ter) BRCA1 Oct 10, 2016 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome germline 17 43092662 AAAGGAGGCTCTAGGTTTTGTCTATCATCTCAGTTCAGAGGCAACGAAACTGGACTCATTA 61750612 15337 NM_000552.4(VWF):c.5557C>T (p.Arg1853Ter) VWF Oct 01, 1992 MedGen:CN517202;MedGen:C1264039,OMIM:193400,Orphanet:ORPHA166078,SNOMED CT:128106003;MedGen:C1264041,Orphanet:ORPHA166096,SNOMED CT:128108002 not provided;von Willebrand disease type 1;von Willebrand disease type 3 germline 12 6013544 GCAGGCGACTCCAACGTGGTGAAGCTCCAGCGAATCGAAGACCTCCCTACCATGGTCACCT 137852453 25343 NM_000132.3(F8):c.6046C>T (p.Arg2016Trp) F8 Jan 01, 1995 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154902120 GAAATGTTACCATCCAAAGCTGGAATTTGGCGGGTGGAATGCCTTATTGGCGAGCATCTAC 886039533 260307 NM_004006.2(DMD):c.9148C>T (p.Gln3050Ter) DMD Jul 19, 2016 MedGen:CN517202 not provided germline X 31348571 GAAGCCCACAGGGACTTTGGTCCAGCATCTCAGCACTTTCTTTCCAGTAAGTCATTTTCAG 886039557 259655 NM_001100.3(ACTA1):c.430C>T (p.Leu144Phe) ACTA1 Jun 01, 2016 MedGen:CN517202 not provided germline 1 229432580 ATGTACGTGGCCATCCAGGCCGTGCTGTCCCTCTACGCCTCCGGCAGGACCACCGGTGAGT 387907214 44138 NM_003659.3(AGPS):c.1703C>T (p.Thr568Met) AGPS Jan 01, 2012 MedGen:C1838612,OMIM:600121,Orphanet:ORPHA309803 Rhizomelic chondrodysplasia punctata type 3 germline 2 177521274 TGTGGGGATTTTGTTTGTTTTTTAGGGTGACGCAGACTTACGATGCAGGTGCTTGTATCTA 397518468 94307 NM_000833.4(GRIN2A):c.1592C>T (p.Thr531Met) GRIN2A Sep 01, 2013 MedGen:C1832814,OMIM:245570 Epilepsy, focal, with speech disorder and with or without mental retardation germline 16 9840706 TGGTGGACTTCTCTGTGCCCTTTGTGGAAACGGGAATCAGTGTCATGGTTTCAAGAAGTAA 1057517708 359671 NM_015570.3(AUTS2):c.1483C>T (p.Arg495Ter) AUTS2 Oct 25, 2016 MedGen:CN517202 not provided germline 7 70766128 TCTTCTTCTCTTCCAGAGCAAGACATCTTGCGACAGGAACTGAACACTCGTTTTTTGGCCT 193921147 39155 NM_004456.4(EZH2):c.2080C>T (p.His694Tyr) EZH2 Jan 13, 2012 MedGen:C0265210,OMIM:277590,SNOMED CT:63119004 Weaver syndrome germline 7 148809340 CGCAAGGGTAACAAAATTCGTTTTGCAAATCATTCGGTAAATCCAAACTGCTATGCAAAAG 121912534 29446 NM_000233.3(LHCGR):c.1703C>T (p.Ala568Val) LHCGR Dec 01, 2000 MedGen:C0342549,OMIM:176410,Orphanet:ORPHA3000,SNOMED CT:237818003 Gonadotropin-independent familial sexual precocity germline 2 48688094 TAATGGCTACCAATAAAGATACAAAGATTGCTAAGAAAATGGCAATCCTCATCTTCACCGA 121912596 17465 NM_001875.4(CPS1):c.2359C>T (p.Arg787Ter) CPS1 Jan 01, 2007 MedGen:C0751753,OMIM:237300,Orphanet:ORPHA147,SNOMED CT:62522004 Congenital hyperammonemia, type I germline 2 210608527 GATCTTGACCGTTTTCATGGAACATCTAGCCGAATTGGTAGCTCTATGAAAAGTGTAGGAG 121908830 15147 NM_017849.3(TMEM127):c.475C>T (p.Gln159Ter) TMEM127 Jun 20, 2014 MedGen:C0027672,SNOMED CT:699346009;Human Phenotype Ontology:HP:0002666,MedGen:C0031511,OMIM:171300;MedGen:C3149711 Hereditary cancer-predisposing syndrome;Pheochromocytoma;Pheochromocytoma, susceptibility to germline 2 96254050 TGGGCTTCTGAACTCATCTTGGCCCAGCAGCAGCAGCATAAGAAGTACCATGGATCCCAGG 111033592 20203 NM_213655.4(WNK1):c.2575C>T (p.Gln859Ter) WNK1 Oct 18, 2016 MedGen:C2752089,OMIM:201300 Hereditary sensory and autonomic neuropathy type IIA germline 12 868046 TCCTTCCTGGAAGCCCAAACTCACCACTTCCAACCCCTGCTGAGGACTGTTGGCCAAAGTC -1 485805 NM_000061.2(BTK):c.953C>T (p.Ser318Phe) BTK Sep 29, 2015 MedGen:C1832241,OMIM:601495,Orphanet:ORPHA33110 Agammaglobulinemia, non-Bruton type germline X 101358638 ACTCCAGCAAAGCTGGCAAATATACAGTGTCTGTGTTTGCTAAATCCACAGGGTGAGTGCT 730880014 39730 NM_005461.4(MAFB):c.161C>T (p.Ser54Leu) MAFB Sep 19, 2014 MedGen:C2674705,OMIM:166300,Orphanet:ORPHA2774 Multicentric osteolysis nephropathy germline 20 40688690 GGCCCTGCACACGCCTGCAGCCAGCCGGCTCGGTGTCCTCCACACCGCTCAGCACTCCGTG -1 455360 NM_000426.3(LAMA2):c.3829C>T (p.Arg1277Ter) LAMA2 Aug 30, 2016 MedGen:CN117977 Laminin alpha 2-related dystrophy germline 6 129315855 TTCTCTACATATAATCCTCAAGTGATCATTCGAGGTGGGACACCTACTCATGCTAGAATTA 370715569 214740 NR_023343.1(RNU4ATAC):n.8C>T RNU4ATAC Nov 02, 2015 Gene:57788,MedGen:C1846059,OMIM:616651,Orphanet:ORPHA353298 Roifman syndrome germline 2 121530887 GCAGCCCAGGGACTTTCTATTATAACCATCCTTTTCTTGGGGTTGCGCTACTGTCCAATGA 387906771 39063 NM_002052.4(GATA4):c.839C>T (p.Thr280Met) GATA4 Nov 11, 2010 MedGen:C1842778,OMIM:607941 Atrial septal defect 2 germline 8 11750166 CCTGTGCCAACTGCCAGACCACCACCACCACGCTGTGGCGCCGCAATGCGGAGGGCGAGCC 769054713 186047 NM_001369.2(DNAH5):c.8998C>T (p.Arg3000Ter) DNAH5 Mar 28, 2017 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244 Ciliary dyskinesia germline 5 13777309 AATCTGATGGAAGATCTGAAGGTTTTGTATCGAACAGCTGGTCAGCAAGGCAAAGGAATCA 137852863 16633 NM_174889.4(NDUFAF2):c.139C>T (p.Arg47Ter) NDUFAF2 Oct 01, 2005 MedGen:C1838979,OMIM:252010 Mitochondrial complex I deficiency germline 5 61073136 AATGACTTTTGTCTTATAGGACAAACTATTCGAGAGAAAAGAATTGTAGAAGCAGCAAATA 1131691615 421368 NM_025243.3(SLC19A3):c.464C>T (p.Ser155Leu) SLC19A3 Sep 14, 2015 MedGen:CN517202 not provided germline 2 227699251 GCGTCACGCTGGCCGCCTACACAGCAGGGTCGGTGCTGGCTCAACTCTTGGTATCCCTGGC 121918479 28344 NM_000506.3(F2):c.1273C>T (p.Arg425Cys) F2 Apr 01, 1992 MedGen:C0272317,SNOMED CT:33297000 Hereditary factor II deficiency disease germline 11 46728138 AAGAACTTCACCGAGAATGACCTTCTGGTGCGCATTGGCAAGCACTCCCGCACCAGGTACA 796052850 203607 NM_007254.3(PNKP):c.610C>T (p.Arg204Ter) PNKP Feb 12, 2014 MedGen:CN517202 not provided germline 19 49864205 ATCTTGTACCCAGAGATTCCCCGTAAGCTCCGAGAGCTGGAAGCCGAGGGCTACAAGGTAT 879253769 244035 NM_021831.5(AGBL5):c.826C>T (p.Arg276Trp) AGBL5 Sep 06, 2017 MedGen:C4310759,OMIM:617023 Retinitis pigmentosa 75 germline 2 27055171 CTGGACTTCATCCTCCGACCTGATGATCCCCGGGCCCAAACCCTCCGTCGCCTCTTCGTCT 587777299 132069 NM_198576.3(AGRN):c.1057C>T (p.Gln353Ter) AGRN Jul 14, 2016 MedGen:C0751882,Orphanet:ORPHA590;MedGen:C3808739,OMIM:615120 Congenital myasthenic syndrome;Myasthenic syndrome, congenital, 8 germline 1 1041582 CTCCTACGGCCCGAGAGCTGCCCTGCCCGGCAGGCGCCAGTGTGTGGGGACGACGGAGTCA 876657385 188143 NM_153816.5(SNX14):c.2596C>T (p.Gln866Ter) SNX14 Nov 06, 2014 MedGen:C4225355,OMIM:616354,Orphanet:ORPHA397709 Spinocerebellar ataxia, autosomal recessive 20 germline 6 85513857 TTCTGTGAAAACACTGAACCTCGCTCTCTCCAAGATAAGCAAAAAGGAGCAAAACAGACTT 138215926 359131 NM_176869.2(PPA2):c.683C>T (p.Pro228Leu) PPA2 Nov 23, 2016 MedGen:C4310663,OMIM:617223 Sudden cardiac failure, alcohol-induced germline 4 105399137 CAGATATTGATGATGTTAAGAAGTTCAAACCGGGTTACCTGGAAGCTACTCTTAATTGGTT 1057518185 359375 NM_014795.3(ZEB2):c.2908C>T (p.Gln970Ter) ZEB2 Oct 24, 2016 MedGen:CN517202 not provided germline 2 144396571 CTATCGCAGGGAGAATTGCTTGATGGAGCACAAGACTACATGTCAGGCCTAGATGATATGA 750428882 202570 NM_000391.3(TPP1):c.1015C>T (p.Arg339Trp) TPP1 May 24, 2017 MedGen:C0027877,OMIM:214200,Orphanet:ORPHA216,SNOMED CT:42012007;MedGen:CN517202 Neuronal ceroid lipofuscinosis;not provided germline 11 6616375 GAGGACTCCCTCAGCAGCGCCTACATCCAGCGGGTCAACACTGAGCTCATGAAGGCTGCCG 137852741 23835 NM_001204.6(BMPR2):c.2695C>T (p.Arg899Ter) BMPR2 Sep 01, 2000 MedGen:C0152171,OMIM:178600,SNOMED CT:26174007 Primary pulmonary hypertension germline 2 202556360 GACAGGAGGGAACGGCCACTAGAAGGTGGCCGAACTAATTCCAATAACAACAACAGCAATC -1 428097 NM_015120.4(ALMS1):c.10885C>T (p.Arg3629Ter) ALMS1 Mar 21, 2017 MedGen:C0268425,OMIM:203800,Orphanet:ORPHA64,SNOMED CT:63702009 Alstrom syndrome germline 2 73572759 GGTGACAGGAAAGAACTGTCCTTGGTGGACCGACTTGATCGTTTGGCTAAAATTCTTCAGA 80356515 34139 NM_001457.3(FLNB):c.4808C>T (p.Pro1603Leu) FLNB Oct 09, 2008 MedGen:C1835564,OMIM:150250 Larsen syndrome, dominant type not provided 3 58136115 CCTACGGGGGTGACGACATCCCACTTTCTCCTTATCGCATCCGAGCCACACAGACGGGTGA 121918143 15698 NM_000312.3(PROC):c.631C>T (p.Arg211Trp) PROC Jun 01, 2014 MedGen:C2674321,OMIM:176860;MedGen:C2676759,OMIM:612304 Thrombophilia, hereditary, due to protein C deficiency, autosomal dominant;Thrombophilia, hereditary, due to protein C deficiency, autosomal recessive germline 2 127426180 ACAGAAGACCAAGAAGACCAAGTAGATCCGCGGCTCATTGATGGGAAGATGACCAGGCGGG 397515422 48365 NM_002465.3(MYBPC1):c.952C>T (p.Arg318Ter) MYBPC1 Nov 21, 2012 MedGen:C3554046,OMIM:614915 Lethal congenital contracture syndrome 4 germline 12 101644783 GTGAAATGGTATAAAAATGGTCAAGAAATTCGACCCAGTACCAAGTAAGTGGGCTTTGCAA 273585617 132436 NM_001127464.2(ZNF469):c.290C>T (p.Pro97Leu) ZNF469 - MedGen:C1835677,OMIM:148300 Keratoconus 1 germline 16 88427760 CTGGGAAGAGGGGCAGCCCCCAGACCCCACCGGGGAGAAGCCCCTTGCAGGCTCCCTCAAG 139328569 429210 NM_000352.4(ABCC8):c.1792C>T (p.Arg598Ter) ABCC8 Mar 07, 2017 MedGen:C1257959,OMIM:256450,SNOMED CT:360339005 Persistent hyperinsulinemic hypoglycemia of infancy germline 11 17430839 ACACCGCTGTTCCTGCTGTCCAGTGTGGTCCGATCTACCGTCAAAGCTCTAGTGAGGTGAG 587777079 102929 NM_015662.2(IFT172):c.4630C>T (p.Arg1544Cys) IFT172 Feb 23, 2015 Human Phenotype Ontology:HP:0002335,MedGen:C0431399,Orphanet:ORPHA475,SNOMED CT:253175003,SNOMED CT:716997004;MedGen:C3810175,OMIM:615630 Joubert syndrome;Short-rib thoracic dysplasia 10 with or without polydactyly germline;unknown 2 27447544 ATGCTGCTGATCGCTCATTACTATGCCACGCGCTCTGCAGCCCAGAGTGTCAAACAGCTGG 78635798 16299 NM_032193.3(RNASEH2C):c.205C>T (p.Arg69Trp) RNASEH2C Aug 15, 2016 MedGen:C1835916,OMIM:610329;MedGen:CN517202 Aicardi Goutieres syndrome 3;not provided germline 11 65720385 CTCGAAGTGTCGTTTCGGGGCCGCTGTCTACGGGGAGAGGAGGTGGCGGTGCCGCCTGGCC 199473284 258311 NM_198056.2(SCN5A):c.4885C>T (p.Arg1629Ter) SCN5A Aug 23, 2017 MedGen:CN230736;MedGen:CN517202 Cardiovascular phenotype;not provided germline 3 38551487 CCGACGCTCTTCCGAGTCATCCGCCTGGCCCGAATAGGCCGCATCCTCAGACTGATCCGAG 121908443 20536 NM_013339.3(ALG6):c.998C>T (p.Ala333Val) ALG6 Jun 08, 1999 MedGen:C2930997,OMIM:603147,Orphanet:ORPHA79320 Congenital disorder of glycosylation type 1C germline 1 63419380 CCCCCCCTTTTTTCTTAAAGGTTAGCTGTGCGCTATCATTCTTTTTATTTTCTTTCCAAGT 121909494 26651 NM_005491.4(MAMLD1):c.808C>T (p.Gln270Ter) MAMLD1 Dec 01, 2006 MedGen:C2677879,OMIM:300758 Hypospadias 2, X-linked germline X 150470381 ATCAGCTATTCGATTCCTTCCACCAGTAAGCAGATAGTGTCACCGAGTTCTTCAATGGCAC 61749721 26868 NM_004992.3(MECP2):c.763C>T (p.Arg255Ter) MECP2 Jul 28, 2017 MedGen:C1845336,OMIM:300496;Gene:57790,MedGen:C1846058,OMIM:300260,Orphanet:ORPHA1762;MedGen:C1968550,OMIM:300055;MedGen:C1968550,OMIM:300055;MedGen:C0035372,OMIM:312750,Orphanet:ORPHA778,SNOMED CT:68618008;MedGen:C0035372,OMIM:312750,Orphanet:ORPHA778,SNOMED CT:68618008;MedGen:C1968556,OMIM:300673,Orphanet:ORPHA209370;MedGen:C1968556,OMIM:300673,Orphanet:ORPHA209370;MedGen:CN517202;MedGen:CN169374 Autism, susceptibility to, X-linked 3;MECP2 duplication syndrome;Mental retardation, X-linked, syndromic 13;Mental retardation, X-linked, syndromic 13;Rett syndrome;Rett syndrome;Severe neonatal-onset encephalopathy with microcephaly;Severe neonatal-onset encephalopathy with microcephaly;not provided;not specified de novo;germline;unknown X 154031065 GTCATGGTGATCAAACGCCCCGGCAGGAAGCGAAAAGCTGAGGCCGACCCTCAGGCCATTC 104894344 20068 NM_020638.2(FGF23):c.386C>T (p.Ser129Phe) FGF23 Oct 01, 2005 MedGen:C1876187,OMIM:211900,OMIM:610233,Orphanet:ORPHA306661 Tumoral calcinosis, familial, hyperphosphatemic germline 12 4370713 CGCTGGAAAACGGGTACGACGTCTACCACTCTCCTCAGTATCACTTCCTGGTCAGTCTGGG 587783464 169260 NM_004380.2(CREBBP):c.1270C>T (p.Arg424Ter) CREBBP Feb 08, 2013 MedGen:C0035934,OMIM:180849,Orphanet:ORPHA353277,SNOMED CT:45582004 Rubinstein-Taybi syndrome germline 16 3792041 CAAATCATCTCTCATTGGAAGAACTGCACACGACATGACTGTCCTGTTTGCCTCCCTTTGA 281875309 40300 NM_015166.3(MLC1):c.206C>T (p.Ser69Leu) MLC1 Aug 15, 2011 MedGen:C1858854,OMIM:604004,Orphanet:ORPHA2478;MedGen:CN517202 Megalencephalic leukoencephalopathy with subcortical cysts 1;not provided germline 22 50083145 AGAGCTGCCTCCTGGTGACCTCGGGGTTTTCGCTGTACCTGGGGAACGTGTTCCCGGCTGA 746551311 431601 NM_206933.2(USH2A):c.4222C>T (p.Gln1408Ter) USH2A Jan 01, 2015 Human Phenotype Ontology:HP:0000547,MeSH:D012174,MedGen:C0035334,OMIM:268000,Orphanet:ORPHA791,SNOMED CT:28835009 Retinitis pigmentosa unknown 1 216196582 GACATCAATATGCTTTCTGAACAATCACCTCAACAGTCTATTCCCATGGCGTTTTCACAGG 587777535 150121 NM_153648.3(SLC24A4):c.823C>T (p.Arg275Ter) SLC24A4 Feb 07, 2013 MedGen:C4014578,OMIM:615887 Amelogenesis imperfecta, hypomaturation type IIA5 germline 14 92454034 ATGATCACCAATAAGTTTGGACCCAGGACCCGACTACGGATGGCCAGCAGGATCATCATTA 770115219 376803 NM_002693.2(POLG):c.694C>T (p.Arg232Cys) POLG May 18, 2015 MedGen:CN517202 not provided germline 15 89330242 TCCTGGTGCAGCCAGCGGCTGGTGGAAGAGCGTTACTCTTGGACCAGCCAGCTGTCGCCGG 776886962 214221 NM_023073.3(CPLANE1):c.2377C>T (p.Gln793Ter) CPLANE1 Feb 23, 2015 MedGen:C3553264,OMIM:614615 Joubert syndrome 17 unknown 5 37224655 TTAAATCGAAGAGTTCCTGAAGCTGATAGTCAGTTAACTGAAAAGATGACACATGAAGCAT 137852991 20011 NM_022437.2(ABCG8):c.1234C>T (p.Arg412Ter) ABCG8 Jun 14, 2016 MedGen:C0342907,OMIM:210250,Orphanet:ORPHA2882,SNOMED CT:238104009 Sitosterolemia germline 2 43873809 TTTTTAAGTCGTCAGATTTCCAACGACTTCCGAGACCTGCCCACCCTCCTCATCCATGGGG 137852688 24041 NM_006563.4(KLF1):c.895C>T (p.His299Tyr) KLF1 Sep 01, 2008 MedGen:C1292231,OMIM:111150 BLOOD GROUP--LUTHERAN INHIBITOR germline 19 12885335 AGCTACACCAAGAGCTCCCACCTGAAGGCGCATCTGCGCACGCACACAGGTGAGGGGGCGG 148606936 263946 NM_002016.1(FLG):c.11452C>T (p.Gln3818Ter) FLG May 02, 2016 MedGen:CN517202 not provided germline 1 152303434 AGTGCAAGCAGAGAAACACGTAATGAGGAACAGTCAGGAGACGGCTCCAGGCACTCAGGGT 121917825 32019 NM_021954.3(GJA3):c.560C>T (p.Pro187Leu) GJA3 Feb 01, 2000 MedGen:C1866078,OMIM:601885 Zonular pulverulent cataract 3 germline 13 20142729 CGCTCTACCGCTGCGACCGCTGGCCCTGCCCCAACACGGTGGACTGCTTCATCTCCAGGCC 587777849 166305 NM_004975.3(KCNB1):c.1121C>T (p.Thr374Ile) KCNB1 Mar 09, 2015 MedGen:C4015119,OMIM:616056;MedGen:CN517202 Epileptic encephalopathy, early infantile, 26;not provided germline 20 49374439 TCCCAGCCTCTTTCTGGTGGGCCACCATCACCATGACTACTGTTGGGTATGGAGACATCTA -1 481835 NM_002316.3(LMX1B):c.736C>T (p.Arg246Ter) LMX1B Nov 13, 2017 MedGen:CN517202 not provided germline 9 126693318 GCCTCCTTCGAGGTCTCGTCGAAGCCTTGCCGAAAGGTGAGGGGCGGCCGGGGGGCGGGGC 878853171 237573 NM_001168272.1(ITPR1):c.4654C>T (p.Gln1552Ter) ITPR1 Jul 20, 2016 MedGen:C0431401,OMIM:206700,Orphanet:ORPHA1065,SNOMED CT:253176002 Gillespie syndrome germline 3 4706208 GCCATTGCCATTCCCGTGGACCTGGACAGCCAAGTCAACAACCTCTTTCTCAAGTCCCACA 121434624 24467 NM_004380.2(CREBBP):c.406C>T (p.Gln136Ter) CREBBP Jul 27, 1995 MedGen:C0035934,OMIM:180849,Orphanet:ORPHA353277,SNOMED CT:45582004 Rubinstein-Taybi syndrome germline 16 3850689 GGAGATTCTTCAGCCCCCAGCCTGCCTAAACAGGCAGCCAGCACCTCTGGGCCCACCCCCG 121908446 20483 NM_000553.4(WRN):c.3913C>T (p.Arg1305Ter) WRN Apr 12, 1996 MedGen:C0043119,OMIM:277700,Orphanet:ORPHA902,SNOMED CT:51626007 Werner syndrome germline 8 31157461 GTGAAAGCTGGCTGCCCCCTTGATTTGGAGCGAGCAGGCCTGACTCCAGAGGTTCAGAAGA 128621201 26416 NM_000061.2(BTK):c.1558C>T (p.Arg520Ter) BTK Sep 12, 2016 MedGen:C1832241,OMIM:601495,Orphanet:ORPHA33110;MedGen:C0221026,OMIM:300755,Orphanet:ORPHA47,SNOMED CT:65880007;MedGen:CN517202 Agammaglobulinemia, non-Bruton type;X-linked agammaglobulinemia;not provided germline X 101356060 GAATACCTGGAGTCAAAGCAGTTCCTTCACCGAGACCTGGTGGGACCTTAGAAGGATTGGC 387906402 23870 NM_000336.2(SCNN1B):c.1847C>T (p.Pro616Leu) SCNN1B Dec 05, 1995 MedGen:C0221043,OMIM:177200,Orphanet:ORPHA526,SNOMED CT:71275003 Pseudoprimary hyperaldosteronism germline 16 23380725 GTGAGCAGGCCCTGCCCATCCCAGGCACCCCGCCCCCCAACTATGACTCCCTGCGTCTGCA 72558473 103263 NM_000531.5(OTC):c.958C>T (p.Arg320Ter) OTC Jun 21, 2017 MedGen:C0268542,OMIM:311250,Orphanet:ORPHA664,SNOMED CT:80908008;MedGen:CN517202 Ornithine carbamoyltransferase deficiency;not provided germline;unknown X 38411952 GAAGTGGATGATGAAGTCTTTTATTCTCCTCGATCACTAGTGTTCCCAGAGGCAGAAAACA 797045450 208030 NM_018451.4(CENPJ):c.1969C>T (p.Gln657Ter) CENPJ Dec 04, 2014 MedGen:C3888212,OMIM:613676 Seckel syndrome 4 germline 13 24906069 AAGGAGAGTGAGTGTGAAGTCGCACCCAAACAACTTCATTCATTGTCCTCAGCTGATGAAT -1 439757 NM_014714.3(IFT140):c.2278C>T (p.Arg760Ter) IFT140 Nov 22, 2017 MedGen:C1849437,OMIM:266920,Orphanet:ORPHA140969 Renal dysplasia, retinal pigmentary dystrophy, cerebellar ataxia and skeletal dysplasia germline 16 1558056 ATCCCTCAGATGGTGTCCAGGAGACCCCTGCGAGACTTTGTGGGGCTGGAGGACTGCGACA 397507539 49020 NM_002834.4(PTPN11):c.1471C>T (p.Pro491Ser) PTPN11 Feb 02, 2017 MeSH:D009634,MedGen:C0028326,Orphanet:ORPHA648,SNOMED CT:205824006;MedGen:CN166718,Orphanet:ORPHA98733;MedGen:CN517202 Noonan syndrome;Rasopathy;not provided germline;unknown 12 112489047 TTCGTAGGTGTTGACTGCGATATTGACGTTCCCAAAACCATCCAGATGGTGCGGTCTCAGA 786200960 178417 NM_006766.4(KAT6A):c.3385C>T (p.Arg1129Ter) KAT6A Mar 05, 2015 MedGen:CN225587;MedGen:C4225396,OMIM:616268,Orphanet:ORPHA457193 KAT6A syndrome;Mental retardation, autosomal dominant 32 de novo;germline 8 41934835 ACTCCTATCTTAAAGCCAGTATCTCTTTTGCGAAAACGTGATGTGAAGAATTCTCCTCTTG 104894180 28749 NM_001083116.2(PRF1):c.190C>T (p.Gln64Ter) PRF1 Mar 01, 2001 MedGen:C1863727,OMIM:603553 Hemophagocytic lymphohistiocytosis, familial, 2 germline 10 70600713 CGCCGCTCGGGCTCCTTCCCAGTGGACACACAAAGGTTCCTGCGGCCCGACGGCACCTGCA 118204005 16249 NM_000429.2(MAT1A):c.790C>T (p.Arg264Cys) MAT1A Feb 01, 2000 MedGen:C0268621,OMIM:250850,Orphanet:ORPHA168598,SNOMED CT:57835009 Hepatic methionine adenosyltransferase deficiency germline 10 80275178 CCTCTGCAGGGGGATGCGGGTGTCACTGGCCGTAAGATTATTGTGGACACCTATGGCGGCT 397507572 65733 NM_000059.3(BRCA2):c.1117C>T (p.Gln373Ter) BRCA2 Nov 01, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome germline 13 32332595 ACTGATCCATTAGATTCAAATGTAGCAAATCAGAAGCCCTTTGAGAGTGGAAGTGACAAAA 118192215 34661 NM_172107.3(KCNQ2):c.997C>T (p.Arg333Trp) KCNQ2 Jun 03, 2016 MedGen:C3150986,OMIM:613720,Orphanet:ORPHA439218;MedGen:CN517202 Early infantile epileptic encephalopathy 7;not provided germline 20 63438651 CAGCACAGGCAGAAGCACTTTGAGAAGAGGCGGAACCCGGCAGCAGGCCTGATCCAGGTGA 727503118 176318 NM_002294.2(LAMP2):c.877C>T (p.Arg293Ter) LAMP2 May 31, 2017 MedGen:C0878677,OMIM:300257,Orphanet:ORPHA34587,SNOMED CT:419097006;MedGen:CN517202 Danon disease;not provided germline X 120442650 AAGCTCTTTTTCAAACAGAAAAATGAAAACCGATTTTATCTGAAGGAAGTGAACATCAGCA 570388861 186815 NM_001287174.1(ABCC8):c.2800C>T (p.Arg934Ter) ABCC8 Oct 07, 2015 MedGen:C1257959,OMIM:256450,SNOMED CT:360339005;MedGen:CN517202 Persistent hyperinsulinemic hypoglycemia of infancy;not provided germline;unknown 11 17408415 CTCTTTGAGCACTGGAAGACCCTCATGAACCGACAGGACCAAGAGCTGGAGAAGGTGGGTA -1 444878 NM_002335.3(LRP5):c.4057C>T (p.Gln1353Ter) LRP5 Jul 20, 2017 MedGen:CN517202 not provided germline 11 68436945 TGTGCGAGCGGCCAGTGTGTCCTCATCAAACAGCAGTGCGACTCCTTCCCCGACTGTATCG 137852718 76637 NM_024757.4(EHMT1):c.1858C>T (p.Arg620Ter) EHMT1 Oct 05, 2010 MedGen:C0795833,OMIM:610253,Orphanet:ORPHA261494 Chromosome 9q deletion syndrome not provided 9 137776684 TCTCACCGTTTCCACAAAGACTGTGCCTCTCGAGTCAATAACGCCAGCTATTGTCCCCACT 267606921 28941 NM_002524.4(NRAS):c.149C>T (p.Thr50Ile) NRAS Jun 02, 2016 MeSH:D009634,MedGen:C0028326,Orphanet:ORPHA648,SNOMED CT:205824006;MedGen:C0041409,OMIM:163950;MedGen:C2750732,OMIM:613224;MedGen:CN166718,Orphanet:ORPHA98733 Noonan syndrome;Noonan syndrome 1;Noonan syndrome 6;Rasopathy germline 1 114713941 ACAGAAAACAAGTGGTTATAGATGGTGAAACCTGTTTGTTGGACATACTGGATACAGCTGG 149258390 40013 NM_001031679.2(MSRB3):c.55C>T (p.Arg19Ter) MSRB3 Jan 07, 2011 MedGen:C2239351,OMIM:613718 Deafness, autosomal recessive 74 germline 12 65308634 TTGGTGACAAAGAGCCAGCCAGTAGCCCTTCGAGCCTGTGGGCTTCCCTCAGGTTGCTGCT 797044702 193386 NM_000169.2(GLA):c.469C>T (p.Gln157Ter) GLA Apr 21, 2017 Human Phenotype Ontology:HP:0001071,MedGen:C0002986,OMIM:301500,Orphanet:ORPHA324,SNOMED CT:16652001;MedGen:CN517202 Fabry disease;not provided germline X 101401710 GGGAGTTTTGGATACTACGACATTGATGCCCAGACCTTTGCTGACTGGGGAGTAGATCTGC 754081635 248863 NM_177438.2(DICER1):c.1966C>T (p.R656*) DICER1 Nov 10, 2014 MedGen:CN072455,OMIM:601200;MedGen:C0027672,SNOMED CT:699346009 DICER1-related pleuropulmonary blastoma cancer predisposition syndrome;Hereditary cancer-predisposing syndrome germline 14 95113166 TTTACTCATCTAGCTCCTAAATGCAGAACCCGAGAGTTGCCTGATGGTACATTTTATTCAA 1131690846 420541 NM_000321.2(RB1):c.1147C>T (p.Gln383Ter) RB1 Dec 27, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 13 48373424 ATCCCCTCTAGGACTGTTATGAACACTATCCAACAATTAATGATGATTTTAAATTCAGCAA 397516943 54089 NM_004415.3(DSP):c.478C>T (p.Arg160Ter) DSP Jun 20, 2017 MedGen:C0349788,Orphanet:ORPHA247,SNOMED CT:253528005,SNOMED CT:281170005;MedGen:C1843896,OMIM:607450;MedGen:CN517202 Arrhythmogenic right ventricular cardiomyopathy;Arrhythmogenic right ventricular cardiomyopathy, type 8;not provided germline 6 7559281 CGAGCCCTTTATAAAGCCATCAGTGTCCCTCGAGTCCGCAGGGCCAGCTCCAAGGGTGGTG -1 428103 NM_004836.6(EIF2AK3):c.2758C>T (p.Gln920Ter) EIF2AK3 May 05, 2016 MedGen:C0432217,OMIM:226980,Orphanet:ORPHA1667,SNOMED CT:254066006 Wolcott-Rallison dysplasia germline 2 88574725 GAGAGGAGCGTGTGTCTGCACATCTTCCTGCAGATCGCAGAGGCAGTGGAGTTTCTTCACA 1060501047 401053 NM_000138.4(FBN1):c.409C>T (p.Gln137Ter) FBN1 Nov 03, 2016 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006 Marfan syndrome germline 15 48600172 GGTAGCTGCAGTGACGATCACTGTCTATGCCAGAAAGGATACATAGGGACTCACTGTGGAC 28933697 24259 NM_000435.2(NOTCH3):c.544C>T (p.Arg182Cys) NOTCH3 May 11, 2017 MedGen:C1272305,OMIM:125310,SNOMED CT:390936003;MedGen:CN517202 Cerebral autosomal dominant arteriopathy with subcortical infarcts and leukoencephalopathy;not provided germline 19 15192095 GGCACCTGCCTCAACACACCTGGCTCCTTCCGCTGCCAGTGTCCAGCTGGCTACACAGGGC 121964868 27349 NM_001007792.1(NTRK1):c.1976C>T (p.Pro659Leu) NTRK1 Jun 19, 2000 MedGen:C0020074,OMIM:256800,Orphanet:ORPHA642,SNOMED CT:62985007 Hereditary insensitivity to pain with anhidrosis germline 1 156880036 GCCGCACCATGCTGCCCATTCGCTGGATGCCGCCCGAGAGCATCCTGTACCGTAAGTTCAC 74315489 31988 NM_000496.2(CRYBB2):c.463C>T (p.Gln155Ter) CRYBB2 Jul 29, 2016 MedGen:C1832175,OMIM:601547;Human Phenotype Ontology:HP:0000519,MedGen:C1842324 Cataract 3, multiple types;Congenital cataract germline;inherited 22 25231617 CACCTCTGGCCCTGCAGGTGGGTTGGCTACCAGTACCCCGGCTACCGTGGGCTGCAGTACC 886041972 264946 NM_004750.4(CRLF1):c.322C>T (p.Gln108Ter) CRLF1 Nov 07, 2017 MedGen:CN517202 not provided germline 19 18599640 CTGGCCCTGGCCAACCTCAATGGGTCCAGGCAGCGGTCGGGGGACAACCTCGTGTGCCACG 143740376 94269 NM_021254.3(CFAP298):c.292C>T (p.Arg98Ter) CFAP298 Sep 03, 2015 MedGen:C3809684,OMIM:615500;MedGen:C0022521,OMIM:244400,Orphanet:ORPHA98861,SNOMED CT:42402006 Ciliary dyskinesia, primary, 26;Kartagener syndrome germline 21 32609853 GGTGCAGTGTTTAAAAAGGATGATATTGGACGAAGGAATGGGCAAGGTAAGTGAGGATTTC 387906752 39029 NM_139125.3(MASP1):c.1489C>T (p.His497Tyr) MASP1 Mar 01, 2011 MedGen:C0796059,OMIM:257920 Michels syndrome germline 3 187236382 CTCTCTGCGTCCTGGATCCTCACAGCAGCTCATGTGCTGCGCTCCCAGCGTAGAGACACCA 876661394 236817 NM_000363.4(TNNI3):c.523C>T (p.Gln175Ter) TNNI3 Feb 27, 2017 MedGen:CN230736;MedGen:CN517202 Cardiovascular phenotype;not provided germline 19 55154056 GAGTCCCTGGACCTGCGGGCCCACCTCAAGCAGGTGAAGAAGGAGGACACCGAGAAGGTGA 886041991 264348 NM_014141.5(CNTNAP2):c.1819C>T (p.Gln607Ter) CNTNAP2 Sep 16, 2016 MedGen:CN517202 not provided germline 7 147562179 CCTTCCTGTGAAGCCTACAAACACCTAGGACAGACATCAAATTATTACTGGATAGATCCTG 2569548 246489 NM_000527.4(LDLR):c.2053C>T (p.Pro685Ser) LDLR Mar 25, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11120435 GGCGGCTGCCAGTATCTGTGCCTCCCTGCCCCGCAGATCAACCCCCACTCGCCCAAGTTTA 193922109 44392 NM_000053.3(ATP7B):c.3955C>T (p.Arg1319Ter) ATP7B Jun 09, 2017 MedGen:C0019202,OMIM:277900,Orphanet:ORPHA905,SNOMED CT:88518009;MedGen:CN517202;MedGen:CN169374 Wilson disease;not provided;not specified germline;unknown 13 51937342 GCTAGCATTCACCTTTCCAAGAGGACTGTCCGAAGGATACGCATCAACCTGGTCCTGGCAC 398124524 102363 NM_144997.5(FLCN):c.1117C>T (p.Gln373Ter) FLCN May 10, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline 17 17217128 ATGCTGGCCTGGCACGTTCTCATGGGGAACCAGGTGATCTGGAAAAGCAGAGACGTGGACC 539400286 214330 NM_025114.3(CEP290):c.4393C>T (p.Arg1465Ter) CEP290 Jan 04, 2016 MedGen:C1857780,OMIM:610188;MedGen:C1970161,OMIM:611134 Joubert syndrome 5;Meckel syndrome type 4 germline;unknown 12 88086083 ATCGCTCTAAGGAAAATTAAGGAGAACATTCGAATAATTCTAGAAACACGGGCAACTTGCA 63751273 29284 NM_005910.5(MAPT):c.902C>T (p.Pro301Leu) MAPT Aug 30, 2016 Human Phenotype Ontology:HP:0002145,MedGen:C0338451,OMIM:600274,Orphanet:ORPHA282,SNOMED CT:230270009;MedGen:C0038868,OMIM:601104,SNOMED CT:28978003;MedGen:CN517202 Frontotemporal dementia;Progressive supranuclear ophthalmoplegia;not provided germline 17 46010389 GTGGCTCAAAGGATAATATCAAACACGTCCCGGGAGGCGGCAGTGTGAGTACCTTCACACG 201818754 132694 NM_022166.3(XYLT1):c.1588-3C>T XYLT1 Mar 06, 2014 MedGen:C4014294,OMIM:615777 Desbuquois dysplasia 2 germline 16 17138534 AGGTCTCAGGCTGGGTCCCTCTCTCCCCTGCAGTCCTTCTTCCATACGGTCCTGGAGAACA 132630287 26123 NM_001128834.2(PLP1):c.418C>T (p.His140Tyr) PLP1 Mar 01, 1994 MedGen:C1839264,OMIM:312920,Orphanet:ORPHA99015 Spastic paraplegia 2 germline X 103786691 CATCAAGCTCATTCTTTGGAGCGGGTGTGTCATTGTTTGGGAAAATGGCTAGGACATCCCG 121907912 18500 NM_000280.4(PAX6):c.406C>T (p.Gln136Ter) PAX6 Dec 01, 1993 MedGen:C0344542,OMIM:106210 Aniridia 1 germline 11 31800808 GTTCTTCGCAACCTGGCTAGCGAAAAGCAACAGATGGGCGCAGACGGCATGTATGATAAAC 387907141 40167 NM_020732.3(ARID1B):c.3304C>T (p.Arg1102Ter) ARID1B May 09, 2016 MedGen:CN029606,OMIM:135900;MedGen:CN517202 Coffin-Siris syndrome 1;not provided germline 6 157181137 GCCGTGGGCAAGAAGCCCCTGGACCTGTTCCGACTCTACGTCTGCGTCAAAGAGATCGGGG 863225166 214217 NM_023073.3(CPLANE1):c.2923C>T (p.Gln975Ter) CPLANE1 Feb 23, 2015 MedGen:C3553264,OMIM:614615 Joubert syndrome 17 unknown 5 37206423 TAATCCATTTTTAAAAATTTACTCACAGAGCAGTCCTTTCGACTTATTCCTCTGCAACACT 749355583 190135 NM_198569.2(ADGRG6):c.19C>T (p.Arg7Ter) ADGRG6 Jun 04, 2015 MedGen:C2931264,Orphanet:ORPHA1037;MedGen:C4225303,OMIM:616503 Arthrogryposis multiplex congenita;Lethal congenital contracture syndrome 9 germline 6 142309560 TTCTTTCTTTGCAGGATGTTTCGCTCAGATCGAATGTGGAGCTGCCATTGGAAATGGAAGC 116052854 426529 NM_002052.4(GATA4):c.1146+129C>T GATA4 Jan 07, 2017 MedGen:C0152021,SNOMED CT:13213009 Congenital heart disease unknown 8 11757212 TCACAGGTGCAAGCAGTGAGCTACCCTCTGCGCTAGGAAGACCCAGCCATTGAGCTGTGTG 886039592 259964 NM_000051.3(ATM):c.4879C>T (p.Gln1627Ter) ATM Mar 24, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline 11 108295029 CTTCGAAGACAACTGGAACTACATAAAGATCAGATGGTGGACATTATGAGAGCTTCTCAGG 80358376 168495 NM_133433.3(NIPBL):c.6892C>T (p.Arg2298Cys) NIPBL Aug 27, 2013 MedGen:CN029798,OMIM:122470 Cornelia de Lange syndrome 1 germline 5 37049239 GAGGCATTTTTTCACACCCAGTCAAGTGTACGCCACTTTGCCCTAAATGTCATTGCATTGA 387907013 39750 NM_024884.2(L2HGDH):c.1003C>T (p.Arg335Ter) L2HGDH Sep 21, 2011 Human Phenotype Ontology:HP:0040144,MedGen:C1855995,OMIM:236792,Orphanet:ORPHA79314 L-2-hydroxyglutaric aciduria germline 14 50267814 CTAGGGCCTAATGCAGTTCTTGCCTTTAAACGAGAGGGTTACAGACCCTTTGACTTCAGTG 119479062 19745 NM_006031.5(PCNT):c.5767C>T (p.Arg1923Ter) PCNT Mar 05, 2013 MedGen:C0432246,OMIM:210720,Orphanet:ORPHA2637 Microcephalic osteodysplastic primordial dwarfism type 2 germline 21 46411840 GGGGCGGCGCCTCCCGAGCTGCAGTGGCTCCGAGCGCAGTGTGCCCGCCTCAGCCGCCAGC 312262841 49554 NM_003611.2(OFD1):c.628C>T (p.Gln210Ter) OFD1 Feb 28, 2013 MedGen:C1510460,OMIM:311200,Orphanet:ORPHA2750,SNOMED CT:52868006 Oral-facial-digital syndrome not provided X 13746429 CTAAATGAGTATAAGAGAGAAATAGAAGAGCAACTTCGGGCAGAAATGTGTCAAAAGGTAA 119103266 17318 NM_014874.3(MFN2):c.617C>T (p.Thr206Ile) MFN2 Feb 01, 2006 MedGen:C0393807,OMIM:601152,Orphanet:ORPHA90120,SNOMED CT:128203003 Hereditary motor and sensory neuropathy with optic atrophy germline 1 11998787 CTGTCACCTTTAGCCCTGGTATTGATGTCACCACAGAGCTGGACAGCTGGATTGACAAGTT -1 447332 NM_024529.4(CDC73):c.505C>T (p.Gln169Ter) CDC73 Jan 12, 2017 Human Phenotype Ontology:HP:0006780,MedGen:C0687150,OMIM:608266,Orphanet:ORPHA143,SNOMED CT:255037004 Parathyroid carcinoma germline 1 193138166 GGTCACAAAGAAGGGATTGTACAGACTGAACAGATTAGGTAAGAATTCTTTTTAAGTAGAA 141431913 48103 NM_183075.2(CYP2U1):c.1462C>T (p.Arg488Trp) CYP2U1 Jan 28, 2013 MedGen:C3539507,OMIM:615030,Orphanet:ORPHA320411 Spastic paraplegia 56, autosomal recessive germline 4 107950250 CATTTTTTTCTGATCTCATTTTTAGGGAAGCGGGTGTGTATGGGAGAACAACTGGCAAAGA 201258663 190040 NM_018965.3(TREM2):c.197C>T (p.Thr66Met) TREM2 Mar 12, 2015 MedGen:C1857316,OMIM:221770 Polycystic lipomembranous osteodysplasia with sclerosing leukoencephalopathy germline 6 41161457 AGAAGGGCCCATGCCAGCGTGTGGTCAGCACGCACAACTTGTGGCTGCTGTCCTTCCTGAG 28928902 29542 NM_170707.3(LMNA):c.1411C>T (p.Arg471Cys) LMNA Apr 30, 2015 MedGen:C0007959,Orphanet:ORPHA166,SNOMED CT:50548001;MedGen:CN043412;MedGen:CN517202 Charcot-Marie-Tooth disease;Mandibuloacral dysplasia with type A lipodystrophy, atypical;not provided germline 1 156136951 GACCAGTCCATGGGCAATTGGCAGATCAAGCGCCAGAATGGAGATGATCCCTTGCTGACTT 104894827 25752 NM_000169.2(GLA):c.1066C>T (p.Arg356Trp) GLA Jun 20, 2014 Human Phenotype Ontology:HP:0001071,MedGen:C0002986,OMIM:301500,Orphanet:ORPHA324,SNOMED CT:16652001 Fabry disease germline X 101398033 GGCTTAGCCTGGGCTGTAGCTATGATAAACCGGCAGGAGATTGGTGGACCTCGCTCTTATA 104893807 27545 NM_003242.5(TGFBR2):c.1346C>T (p.Ser449Phe) TGFBR2 Aug 01, 2004 MedGen:C2674876,OMIM:610168 Loeys-Dietz syndrome 2 germline 3 30674196 TTGAGTCCTTCAAGCAGACCGATGTCTACTCCATGGCTCTGGTGCTCTGGGAAATGACATC 886039251 259338 NM_001242896.1(DEPDC5):c.526C>T (p.Gln176Ter) DEPDC5 Apr 13, 2016 Gene:50987,MedGen:C1858477,OMIM:604364 Epilepsy, familial focal, with variable foci 1 germline 22 31783949 TCTACGTCGGCTATGGTTTACATATTTATTCAGATGAGCTGTGAAATGTGGGATTTTGATA 180177202 200471 NM_000030.2(AGXT):c.331C>T (p.Arg111Ter) AGXT Nov 27, 2014 MedGen:C0268164,OMIM:259900,Orphanet:ORPHA93598,SNOMED CT:65520001 Primary hyperoxaluria, type I germline 2 240869335 CTGGTTGGGGCCAATGGCATTTGGGGGCAGCGAGCCGTGGACATCGGGGAGCGCATAGGTA 886042954 269055 NM_182961.3(SYNE1):c.8866C>T (p.Gln2956Ter) SYNE1 Dec 04, 2015 MedGen:C1853116,OMIM:610743,Orphanet:ORPHA88644 Spinocerebellar ataxia, autosomal recessive 8 germline 6 152381149 AACCTGGTCAGCCAGATGGCCCTTTCGGAGCAGGAATTCTCAGGCCAAGTGGCTCAACTGG 762083530 183303 NM_000051.3(ATM):c.4852C>T (p.Arg1618Ter) ATM Jul 25, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Ataxia-telangiectasia syndrome;Hereditary cancer-predisposing syndrome;not provided germline 11 108295002 TTGACAAGACTTGAAGGACTAAAGGATCTTCGAAGACAACTGGAACTACATAAAGATCAGA 121918060 15109 NM_000374.4(UROD):c.185C>T (p.Pro62Leu) UROD Apr 01, 1996 MedGen:C0162569 Hepatoerythropoietic porphyria germline 1 45013187 CCCAGGACTTTTTCAGCACGTGTCGCTCTCCTGAGGCCTGCTGTGAACTGACTCTGCAGGT 137853335 24250 NM_000457.4(HNF4A):c.487C>T (p.Arg163Ter) HNF4A Jun 07, 2017 MedGen:C1852093,OMIM:125850;MedGen:CN517202 Maturity-onset diabetes of the young, type 1;not provided germline 20 44413795 AATGCGCTCCTGCAGGCGGAGGTCCTGTCCCGACAGGTACCGGGGTGATCCTGCCACCCAC 759103701 426709 NM_005378.5(MYCN):c.964C>T (p.Arg322Ter) MYCN Jan 12, 2016 MedGen:C0796068,OMIM:164280 Feingold syndrome 1 unknown 2 15945666 AGGGCTCAGTCCAGCGAGCTGATCCTCAAACGATGCCTTCCCATCCACCAGCAGCACAACT 387907091 40027 NM_017950.3(CCDC40):c.1315C>T (p.Gln439Ter) CCDC40 Jan 01, 2011 MedGen:C3151137,OMIM:613808 Ciliary dyskinesia, primary, 15 germline 17 80058649 AGGATCCGGGCAGAAATCGAGAAGAAAAAGCAGGTATTCTGCAAACTCGACACATGTTTAA 972964381 373579 NM_052867.3(NALCN):c.2008C>T (p.Gln670Ter) NALCN Dec 29, 2016 MedGen:CN517202 not provided germline 13 101143190 GAGAGTTTTATGAAGCAGTTTATTGACCGCCAGCAACAGGACACATGTTGCCTCCTGAGAA 946132834 414260 NM_001204.6(BMPR2):c.1207C>T (p.Q403*) BMPR2 - MedGen:C0152171,OMIM:178600,SNOMED CT:26174007 Primary pulmonary hypertension germline 2 202532663 AACTTGAGGGACTGTGAATCAGCTTTGAAACAAGTAGACATGTATGCTCTTGGACTAATCT 121918337 16738 NM_015040.3(PIKFYVE):c.2962C>T (p.Gln988Ter) PIKFYVE Jul 01, 2008 MedGen:C1562113,OMIM:121850,Orphanet:ORPHA98970,SNOMED CT:417183007 Fleck corneal dystrophy germline 2 208325773 TCATTGTTGCCACTCCCTGTGGATGACCAACAAGATGCTTTAGGCAGCGAGCAGCCAGAGA 121917746 27978 NM_003124.4(SPR):c.355C>T (p.Gln119Ter) SPR Aug 01, 2001 MedGen:C0268468,OMIM:612716,Orphanet:ORPHA70594,SNOMED CT:45116002 Sepiapterin reductase deficiency germline 2 72888364 AAAGGCTTCGTGGACCTGAGTGACTCCACTCAAGTGAACAACTACTGGGCACTGAACTTGA -1 426253 NM_207346.2(TSEN54):c.1156C>T (p.Gln386Ter) TSEN54 Nov 02, 2015 MedGen:CN517202 not provided germline 17 75522237 TCCAGCTGGCGGGAGTACAAGGAGCTGCTGCAGCGGCGGCAGGTGCAGAGGAGCCAGCGCC 267607618 77697 NM_170707.3(LMNA):c.1294C>T (p.Gln432Ter) LMNA Dec 07, 2016 MedGen:CN043576;EFO:EFO_0000407,Human Phenotype Ontology:HP:0001644,MedGen:C0007193,Orphanet:ORPHA217604,SNOMED CT:195021004;MedGen:CN517202 Charcot-Marie-Tooth disease, type 2;Primary dilated cardiomyopathy;not provided germline 1 156136350 GAGTCCACTGAGAGCCGCAGCAGCTTCTCACAGCACGCACGCACTAGCGGGCGCGTGGCCG 786205000 187398 NM_005249.4(FOXG1):c.136C>T (p.Gln46Ter) FOXG1 Jun 12, 2013 MedGen:CN517202 not provided de novo 14 28767415 AGCCACGGCCACCACAACAGCCACCACCCCCAGCACCACCACCACCACCACCACCATCACC 74517001 425462 NM_032504.1(UNC80):c.2527C>T (p.Arg843Ter) UNC80 Jun 08, 2017 na;MedGen:CN517202 UNC80-Related Disorder;not provided germline;paternal 2 209829280 AAGCTATACAAGCTAGATAAGATGCAGTTCCGACAAACCATGAGGGACTATGTGAACAAGG 63751011 104114 NM_005910.5(MAPT):c.915+16C>T MAPT Apr 04, 2017 MedGen:CN517202 not provided germline 17 46010418 CCGGGAGGCGGCAGTGTGAGTACCTTCACACGTCCCATGCGCCGTGCTGTGGCTTGAATTA 397516940 54081 NM_004415.3(DSP):c.4531C>T (p.Gln1511Ter) DSP Aug 07, 2017 MedGen:C0349788,Orphanet:ORPHA247,SNOMED CT:253528005,SNOMED CT:281170005;MedGen:C1843896,OMIM:607450;MedGen:CN517202 Arrhythmogenic right ventricular cardiomyopathy;Arrhythmogenic right ventricular cardiomyopathy, type 8;not provided germline 6 7580721 GAAGATGAAAACGCGAGATTACAAAGGGTCCAGTATGACCTGCAGAAAGCAAACAGTAGTG 121912770 32687 NM_000494.3(COL17A1):c.3067C>T (p.Gln1023Ter) COL17A1 Feb 01, 1997 MedGen:C0268374,OMIM:226650,Orphanet:ORPHA89840,SNOMED CT:33662006 Adult junctional epidermolysis bullosa germline 10 104038409 GAGATTCAGCAGTACATCTCTGAGTACATGCAGAGTGAGTAGCTGGCCGCCGCAAGCCGTG 121434631 24191 NM_000409.4(GUCA1A):c.451C>T (p.Leu151Phe) GUCA1A Apr 01, 2005 MedGen:C1865869,OMIM:602093 Cone dystrophy 3 germline 6 42179248 CTGATTCCCTTTCTCTCTACCCCAGGGGAACTCTCCCTGGAAGAGTTTATAGAGGGCGTCC 387906850 39262 NM_005902.3(SMAD3):c.859C>T (p.Arg287Trp) SMAD3 Mar 28, 2017 MedGen:C3151087,OMIM:613795,Orphanet:ORPHA284984;MedGen:CN517202 Loeys-Dietz syndrome 3;not provided germline 15 67181441 GTCAACAGGAATGCAGCAGTGGAGCTGACACGGAGACACATCGGTATGGGGTGGCTCCATT -1 444154 NM_015570.3(AUTS2):c.1582C>T (p.Gln528Ter) AUTS2 Jul 13, 2017 MedGen:CN517202 not provided germline 7 70766227 CCCTACCTGCGGACCGAGTTCCATCAGCACCAGCACCAGCACCAGCACACCCACCAGCACA 121917764 27369 NM_199292.2(TH):c.941C>T (p.Thr314Met) TH Jan 01, 2000 MedGen:C1854299,OMIM:605407 Segawa syndrome, autosomal recessive germline 11 2166762 AGTGACCCGCGTGGCCCCTTGCAGAGCGCACGGGCTTCCAGCTGCGGCCTGTGGCCGGCCT 141090143 40091 NM_174917.4(ACSF3):c.1672C>T (p.Arg558Trp) ACSF3 Feb 23, 2017 MedGen:C3280314,OMIM:614265,Orphanet:ORPHA289504;MedGen:CN517202 Combined malonic and methylmalonic aciduria;not provided germline 16 89154148 TCGGAGCTGGTGCTGGTGGAGGAGATCCCGCGGAACCAGATGGGCAAGATTGACAAGAAGG 150675340 358307 NM_000520.5(HEXA):c.709C>T (p.Gln237Ter) HEXA Apr 05, 2016 MedGen:C0039373,OMIM:272800,Orphanet:ORPHA845,SNOMED CT:111385000 Tay-Sachs disease germline;unknown 15 72350614 TACAACCCTGTCACCCACATCTACACAGCACAGGATGTGAAGGAGGTCATTGAATACGCAC 886041363 264997 NM_000444.5(PHEX):c.1601C>T (p.Pro534Leu) PHEX May 09, 2016 MedGen:C0733682,OMIM:307800,Orphanet:ORPHA89936,SNOMED CT:82236004;MedGen:CN517202 Familial X-linked hypophosphatemic vitamin D refractory rickets;not provided germline;maternal;paternal X 22190458 GTTTCTTTTTCTACAGGTGGTTTACAAATCCGACGACTGTCAATGCCTTCTACAGTGCATC 121918640 27891 NM_003126.3(SPTA1):c.121C>T (p.Arg41Trp) SPTA1 Aug 01, 1989 MedGen:C1851741,OMIM:130600 Elliptocytosis 2 germline 1 158685251 GTGTTGACTCGGTATCAAAGTTTCAAGGAGCGGGTCGCTGAGAGGGGTCAGAAGCTTGAGG 387907329 51081 NM_007075.3(WDR45):c.700C>T (p.Arg234Ter) WDR45 Oct 03, 2017 Human Phenotype Ontology:HP:0001344,MedGen:C1854882;Human Phenotype Ontology:HP:0002194,MedGen:C1837658;Human Phenotype Ontology:HP:0000750,MedGen:C0454644;Human Phenotype Ontology:HP:0001263,MedGen:C4020875;Human Phenotype Ontology:HP:0002079,MedGen:C0344482;MedGen:C3550973,OMIM:300894,Orphanet:ORPHA329284;Human Phenotype Ontology:HP:0001250,MedGen:C0036572;MedGen:CN517202 Absent speech;Delayed gross motor development;Delayed speech and language development;Global developmental delay;Hypoplasia of the corpus callosum;Neurodegeneration with brain iron accumulation 5;Seizures;not provided germline;maternal;unknown X 49075573 CAATCCAAGGAGAAACTGGTGGAGCTGCGCCGAGGCACTGACCCTGCCACCCTCTACTGGT 397515469 76948 NM_199355.3(ADAMTS18):c.97C>T (p.Gln33Ter) ADAMTS18 Sep 01, 2013 MedGen:C3809567,OMIM:615458,Orphanet:ORPHA369970 Microcornea, myopic chorioretinal atrophy, and telecanthus germline 16 77434499 GCGATGTCACCTTTTCTCTTGCAGGCGCTCCAGCTGTGCTGCCTCTGCTGTGCGTCGGTCG 387906690 38849 NM_004959.4(NR5A1):c.392C>T (p.Pro131Leu) NR5A1 Oct 08, 2010 MedGen:C3151406,OMIM:613957 Spermatogenic failure 8 germline 9 124500568 AGACAGGGCCCCCGATGGGGGTGCCCCCGCCGCCCCCTCCCGCACCGGACTACGTGCTGCC 387906538 29725 NM_000208.3(INSR):c.2770C>T (p.Arg924Ter) INSR Jan 01, 1990 MedGen:C0265344,OMIM:246200,Orphanet:ORPHA508,SNOMED CT:111307005 Leprechaunism syndrome germline 19 7132230 CGTGGGCTGTCACCGGGGAACTACAGCGTGCGAATCCGGGCCACCTCCCTTGCGGGCAACG 119489105 20441 NM_006343.2(MERTK):c.1951C>T (p.Arg651Ter) MERTK Mar 09, 2010 MedGen:C3151228,OMIM:613862 Retinitis pigmentosa 38 germline 2 112008466 ATGAAAGACTTCAGCCACCCAAATGTCATTCGACTTCTAGGTACTTCCGAGAAATGCAGGA -1 426372 NM_000268.3(NF2):c.1228C>T (p.Gln410Ter) NF2 Jun 19, 2017 MedGen:CN517202 not provided germline 22 29673374 CAGAAGGCCGCAGAGGCTGAGCAGGAAATGCAGCGCATCAAGGCCACAGCGATTCGCACGG 606231295 167522 NM_004415.3(DSP):c.1691C>T (p.Thr564Ile) DSP Nov 01, 2012 MedGen:C4014393,OMIM:615821 Cardiomyopathy, dilated, with woolly hair, keratoderma, and tooth agenesis germline 6 7570553 TGATTGACATAGAGAAGATCAGGGCCATGACAATCGCCAAGGTATGTCCTCAGGGCCACTT 397515443 59597 NM_018972.2(GDAP1):c.821C>T (p.Pro274Leu) GDAP1 Aug 09, 2011 MedGen:C1842983,OMIM:607831,Orphanet:ORPHA101097 Charcot-Marie-Tooth disease type 2K germline 8 74364111 CAAGGAGAAACTGGGGAAACGGAAAGCGACCAAACTTGGAAACCTATTACGAGCGTGTCTT 780011606 481743 NM_022132.4(MCCC2):c.538C>T (p.Arg180Ter) MCCC2 Dec 06, 2017 MedGen:CN517202 not provided germline 5 71604382 TCAGTTGATTCGGGAGGAGCATACTTACCTCGACAAGCAGATGTGTTTCCAGATCGAGACC 1064796942 411272 NM_000444.5(PHEX):c.1147C>T (p.Gln383Ter) PHEX Mar 10, 2017 MedGen:CN517202 not provided germline X 22111534 TCCAGAATTCCAAACCTTAGCAGGCGCTTTCAGTATAGATGGCTGGAATTCTCAAGGGTAA 778665661 247512 NM_003504.4(CDC45):c.1660C>T (p.Arg554Trp) CDC45 Oct 20, 2016 MedGen:C4310738,OMIM:617063 Meier-gorlin syndrome 7 germline 22 19518867 ACTTCAGTAATTGAGCTGAAAGCTGAGGATCGGAGCAAGTTTCTGGACGCACTTATTTCCC 121917984 79470 NM_006920.4(SCN1A):c.677C>T (p.Thr226Met) SCN1A Jul 24, 2017 MedGen:C0393706,Orphanet:ORPHA1934;MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002;MedGen:CN517202 Early infantile epileptic encephalopathy;Severe myoclonic epilepsy in infancy;not provided germline;unknown 2 166052869 GAACATTCAGAGTTCTCCGAGCATTGAAGACGATTTCAGTCATTCCAGGTGAGAGCAAGGT 111033749 36580 NM_000155.3(GALT):c.691C>T (p.Arg231Cys) GALT Nov 29, 2016 MedGen:C0268151,OMIM:230400,Orphanet:ORPHA79239,SNOMED CT:124354006;MedGen:CN517202 Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase;not provided germline;unknown 9 34648765 GACTTCCTATCCATTCTGTCTTCCTAGGAACGTCTGGTCCTAACCAGTGAGCACTGGTTAG 1057521083 366251 NM_015265.3(SATB2):c.1165C>T (p.Arg389Cys) SATB2 Jan 04, 2017 MedGen:CN517202 not provided germline 2 199348709 CAAGCTGTCTTTGCAAGAGTGGCATTCAACCGCACACAGGTACAATTAGCATTAAACACTG 121918181 15944 NM_000181.3(GUSB):c.526C>T (p.Leu176Phe) GUSB Jan 12, 2017 MedGen:C0026709,OMIM:253200,Orphanet:ORPHA583;MedGen:C0085132,OMIM:253220,Orphanet:ORPHA584 Mucopolysaccharidosis type VI;Mucopolysaccharidosis type VII germline 7 65979782 CTCCGAATCACTATCGCCATCAACAACACACTCACCCCCACCACCCTGCCACCAGGGACCA 1060505020 404621 NM_016569.3(TBX3):c.1483C>T (p.Gln495Ter) TBX3 Apr 19, 2017 MedGen:C1866994,OMIM:181450 Ulnar-mammary syndrome germline 12 114674452 CAGACGGACGCGGCCGCCGCGCACCTGGCCCAGGGCCCCCTGCCTGGCCTCGGCTTCGCCC 104894594 16604 NM_000263.3(NAGLU):c.1927C>T (p.Arg643Cys) NAGLU Jan 01, 1999 MedGen:C0086648,OMIM:252920,Orphanet:ORPHA79270,SNOMED CT:59990008 Mucopolysaccharidosis, MPS-III-B germline 17 42543933 GCCGAGGCCGATTTCTACGAGCAGAACAGCCGCTACCAGCTGACCTTGTGGGGGCCAGAAG 587783907 168362 NM_133433.3(NIPBL):c.2500C>T (p.Arg834Ter) NIPBL Feb 08, 2013 MedGen:CN029798,OMIM:122470 Cornelia de Lange syndrome 1 germline 5 36985680 TCAGATGACAGGGGTGAATCAGAGCGACATCGAGGGGATCAGTCTAGGGTTCGAAGACCAG 587784269 169355 NM_000430.3(PAFAH1B1):c.460C>T (p.Gln154Ter) PAFAH1B1 Feb 08, 2013 MedGen:C1843916,OMIM:607432 Lissencephaly 1 germline 17 2670223 CGAACTCTTAAAGGACATACAGACTCTGTACAGGACATTTCATTCGACCACAGCGGCAAGC 121918175 15935 NM_000181.3(GUSB):c.1061C>T (p.Ala354Val) GUSB Jan 01, 1993 MedGen:C0085132,OMIM:253220,Orphanet:ORPHA584 Mucopolysaccharidosis type VII germline 7 65974923 ATTTCCACGGTGTCAACAAGCATGAGGATGCGGACGTGTGTTGGGGCTCCTGGGTCCTTGT 199472719 67768 NM_000218.2(KCNQ1):c.775C>T (p.Arg259Cys) KCNQ1 Jul 02, 2017 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MeSH:D008133,MedGen:C0023976,SNOMED CT:9651007;MedGen:CN517202 Congenital long QT syndrome;Long QT syndrome;not provided germline 11 2572104 AGGCTCCTGGGCTCCGTGGTCTTCATCCACCGCCAGGTGGGTGGCCCGGGTTAGGGGTGCG 140494585 39282 NM_005619.4(RTN2):c.1100C>T (p.Ser367Phe) RTN2 Feb 01, 2012 MedGen:C1858106,OMIM:604805,Orphanet:ORPHA100993 Spastic paraplegia 12 germline 19 45489487 CAGGAGTGGTCTTCACAGGCCTGATGGTCTCCCTCCTCTGCCTCCTGCACTTTAGCATCGT 104894735 25817 NM_003916.4(AP1S2):c.154C>T (p.Arg52Ter) AP1S2 Dec 01, 2006 MedGen:C0796254,OMIM:304340,Orphanet:ORPHA1568 Pettigrew syndrome germline X 15852371 AAACCTAAAATGTGCAGCTTCCTTGAGTGGCGAGATCTGAAGATTGTTTACAAAAGGTATA 797044989 204980 NM_002204.3(ITGA3):c.1387C>T (p.Arg463Trp) ITGA3 Jul 01, 2015 MedGen:C3553636,OMIM:614748,Orphanet:ORPHA306504 Interstitial lung disease, nephrotic syndrome, and epidermolysis bullosa, congenital germline 17 50074452 TCTGTCTGGCTCTGTTGTCTCTGCAGGGCCCGGCCCGTCATCAACATCGTCCACAAGACCT 63750759 21603 NM_001171.5(ABCC6):c.3940C>T (p.Arg1314Trp) ABCC6 Sep 27, 2017 MedGen:C3276161,OMIM:614473;MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005;MedGen:CN517202 Generalized arterial calcification of infancy 2;Pseudoxanthoma elasticum;not provided germline 16 16154974 GGGAAGTCCTCCCTGGCCAGTGGGCTGCTGCGGCTCCAGGAGGCAGCTGAGGGTGGGATCT 587784570 168032 NM_014795.3(ZEB2):c.823C>T (p.Gln275Ter) ZEB2 Sep 06, 2013 MedGen:C1856113,OMIM:235730,Orphanet:ORPHA2152 Mowat-Wilson syndrome germline 2 144401292 TTTCTCCTTTTATAGCACCAAATGCTAACCCAAGGAGCAGGTAATCGCAAGTTCAAATGCA 775933965 202851 NM_001482.2(GATM):c.778C>T (p.Arg260Ter) GATM Sep 24, 2012 MedGen:CN517202 not provided germline 15 45366406 GAGCCATGCTTTGATGCTGCTGACTTCATTCGAGCTGGAAGAGATATTTTTGCACAGAGAA 104893992 24342 NM_001024630.3(RUNX2):c.673C>T (p.Arg225Trp) RUNX2 Nov 01, 1999 MedGen:C0008928,OMIM:119600,Orphanet:ORPHA1452,SNOMED CT:65976001 Cleidocranial dysostosis germline 6 45438039 AGAGCAATTAAAGTTACAGTAGATGGACCTCGGGAACCCAGAAGTAAGTACTCCCCTTTTT 121434450 22378 NM_005144.4(HR):c.3526C>T (p.Gln1176Ter) HR Oct 01, 2002 MedGen:C1859592,OMIM:209500,Orphanet:ORPHA86819 Atrichia with papular lesions germline 8 22115744 TCTTTTTCCTAGATGGACTGGGCTGTGTTCCAAGCAGTGAAGGTGGCCGTGGGGACATTAC -1 446878 NM_001142966.2(GREB1L):c.2251C>T (p.Arg751Cys) GREB1L Dec 18, 2017 MedGen:CN703737,OMIM:617805 RENAL HYPODYSPLASIA/APLASIA 3 germline 18 21473099 GCCCATCAGAGAGCAGAAAAATATGTTGTTCGTCTAGACAATGAGATTCAAACCAAGTTTG 104893637 22580 NM_002381.4(MATN3):c.361C>T (p.Arg121Trp) MATN3 Jul 25, 2013 MedGen:C1846843,OMIM:607078,Orphanet:ORPHA93311 Multiple epiphyseal dysplasia 5 germline 2 20006173 GACACTCTGGACATTGGGCCAGCCGACACGCGGGTGGCAGTGGTGAACTATGCTAGCACTG 1057517096 357037 NM_000228.2(LAMB3):c.1117C>T (p.Gln373Ter) LAMB3 Aug 02, 2016 MedGen:C0079683,OMIM:226700,Orphanet:ORPHA79404,SNOMED CT:400140006 Junctional epidermolysis bullosa gravis of Herlitz unknown 1 209629752 TTCCGGAACCGGCGCCCGGGAGCTTCCATTCAGGAGACCTGCATCTGTGAGTAGAGGCTCC 1033093801 481998 NM_001198868.1(CAPN1):c.853C>T (p.Arg285Ter) CAPN1 Nov 29, 2017 MedGen:CN517202 not provided germline 11 65187964 GACAGGAGCTCTGGCAAATAGGTGAACTACCGAGGCCAGGTGGTGAGCCTGATCCGGATGC 128626251 26300 NM_004006.2(DMD):c.6373C>T (p.Gln2125Ter) DMD Mar 04, 2016 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009;MedGen:C3668940,OMIM:302045;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Becker muscular dystrophy;Dilated cardiomyopathy 3B;Duchenne muscular dystrophy germline X 32216981 ATATTTAATCAGTGGCTAACAGAAGCTGAACAGTTTCTCAGAAAGACACAAATTCCTGAGA 119455955 17682 NM_000391.3(TPP1):c.622C>T (p.Arg208Ter) TPP1 Aug 10, 2017 MedGen:C1876161,OMIM:204500,Orphanet:ORPHA228349;MeSH:D030342,MedGen:C0950123;MedGen:C0027877,OMIM:214200,Orphanet:ORPHA216,SNOMED CT:42012007;MedGen:CN517202 Ceroid lipofuscinosis neuronal 2;Inborn genetic diseases;Neuronal ceroid lipofuscinosis;not provided germline;unknown 11 6617040 CTGGGGGTAACCCCCTCTGTGATCCGTAAGCGATACAACTTGACCTCACAAGACGTGGGCT 199757347 301638 NM_006846.3(SPINK5):c.652C>T (p.Arg218Ter) SPINK5 Jun 14, 2016 MedGen:C0265962,OMIM:256500,Orphanet:ORPHA634 Netherton syndrome germline 5 148091214 GCCAAGCGAGAGGGTGAAACTAGAATTCGACGAAATGCTGAAAAGGTAAAATGACTCACCA 1131691651 421399 NM_003494.3(DYSF):c.1177C>T (p.Gln393Ter) DYSF Jun 10, 2016 MedGen:CN517202 not provided germline 2 71526343 CTGAAGGTCTTCCGGGCCGAGGACTTGCCGCAGAGTGCGTGGGGCGCGCCCTTGGGTGGGA 104894382 23034 NM_000192.3(TBX5):c.709C>T (p.Arg237Trp) TBX5 Jun 13, 2016 MedGen:C3542024,OMIM:614823;MedGen:C0018798,OMIM:140500,OMIM:234750,Orphanet:ORPHA88991;MedGen:C0265264,OMIM:142900,SNOMED CT:19092004 Aortic valve disease 2;Heart, malformation of;Holt-Oram syndrome germline;inherited 12 114385522 ATTGAGAATAATCCCTTTGCCAAAGGATTTCGGGGCAGTGATGACATGGAGCTGCACAGAA 267606691 15143 NM_001029883.2(C2orf71):c.556C>T (p.Gln186Ter) C2orf71 May 14, 2010 MedGen:C3150691,OMIM:613428 Retinitis pigmentosa 54 germline 2 29073706 TTCCCGGAGCCTCTGGTAAAGGCCCACCAGCAGGCTTACACCTATCTACACTCCAGCCTCT 886042153 265648 NM_025114.3(CEP290):c.2722C>T (p.Arg908Ter) CEP290 Jun 15, 2015 MedGen:C1857780,OMIM:610188 Joubert syndrome 5 germline 12 88106770 AGGCAATATACAACCTTAGTAGAATTGGAGCGACAACTTAGAAAAGAAAATGAGAAGCAAA 587784209 168283 NM_022455.4(NSD1):c.6559C>T (p.Arg2187Ter) NSD1 Feb 08, 2013 MedGen:CN035106,OMIM:117550 Sotos syndrome 1 germline 5 177293927 ATGTGCCCCAGCTCCTTTTGTAAGCAGCATCGAGAAGGGATGCTTTTCATTTCCAAACTGG 137853070 22505 NM_002241.4(KCNJ10):c.500C>T (p.Ala167Val) KCNJ10 Nov 12, 2010 MedGen:C2748572,OMIM:612780,Orphanet:ORPHA199343 SeSAME syndrome germline 1 160042033 TGGAAATCTTCATCACAGGTACCTTCCTGGCGAAGATTGCCCGGCCCAAGAAGCGGGCTGA 104894878 25727 NM_000266.3(NDP):c.361C>T (p.Arg121Trp) NDP Dec 03, 2015 MedGen:C1844579,OMIM:305390;MedGen:CN517202 Familial exudative vitreoretinopathy, X-linked;not provided germline X 43949840 TCAGGGGGCATGCGACTCACTGCCACCTACCGGTACATCCTCTCCTGTCACTGCGAGGAAT 398122558 183919 NM_000059.3(BRCA2):c.6475C>T (p.Gln2159Ter) BRCA2 Apr 22, 2016 MedGen:C2675520,OMIM:612555;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 2;Hereditary cancer-predisposing syndrome germline 13 32340830 ATTAAAGTTTCTCCATATCTCTCTCAATTTCAACAAGACAAACAACAGTTGGTATTAGGAA 72554632 25006 NM_000240.3(MAOA):c.886C>T (p.Gln296Ter) MAOA Oct 22, 1993 MedGen:C0796275,OMIM:300615,Orphanet:ORPHA3057 Monoamine oxidase A deficiency germline X 43731784 GAGCTTCCAGCAGAGAGAAACCAGTTAATTCAGCGGCTTCCAATGGGAGCTGTCATTAAGT 778533826 214351 NM_015272.4(RPGRIP1L):c.3529C>T (p.Arg1177Ter) RPGRIP1L Feb 23, 2015 MedGen:C1969053,OMIM:611560 Joubert syndrome 7 unknown 16 53619112 GACACTATCCAACGGCTGTTTGTTGAGTGTCGATTCTACAGTCTTCCTGCTGAAGAGACAC 143277125 96858 NM_000535.6(PMS2):c.949C>T (p.Gln317Ter) PMS2 Jul 06, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Hereditary cancer-predisposing syndrome;Lynch syndrome germline 7 5992012 AATGAGGTCTACCACATGTATAATCGACACCAGTATCCATTTGTTGTTCTTAACATTTCTG 886041705 265017 NM_001193416.2(DDX3X):c.1804C>T (p.Arg602Ter) DDX3X Nov 07, 2017 MedGen:CN517202 not provided germline X 41347349 TTTAGTGGAGGGTTTGGTGCCAGAGACTACCGACAAAGTAGCGGTGCCAGCAGTTCCAGCT 104894492 20568 NM_014249.3(NR2E3):c.226C>T (p.Arg76Trp) NR2E3 Feb 01, 2000 MedGen:C1849394,OMIM:268100,Orphanet:ORPHA53540 Enhanced s-cone syndrome germline 15 71811590 GGCTGCAGCGGCTTCTTCAAGAGGAGCGTACGGCGGAGGCTCATCTACAGGTGAGTGCGGT -1 425983 NM_003482.3(KMT2D):c.11749C>T (p.Gln3917Ter) KMT2D Jun 21, 2017 MedGen:CN517202 not provided germline 12 49032956 CAACAGCAACAGCAACTTCAGCAGCAGCAGCAGCAGCAGCTACAACAGCAACAGCAACTTC 1060500618 395444 NM_004415.3(DSP):c.2602C>T (p.Gln868Ter) DSP Dec 25, 2016 MedGen:C1843896,OMIM:607450 Arrhythmogenic right ventricular cardiomyopathy, type 8 germline 6 7575460 GAAAAAGTCACACAGCTGACAGACCGCTGGCAAAGGATAGATAAACAGATCGACTTTAGGT 778457903 362090 NM_014855.2(AP5Z1):c.412C>T (p.Arg138Ter) AP5Z1 Jan 26, 2017 MedGen:C3150901,OMIM:613647,Orphanet:ORPHA306511 Spastic paraplegia 48, autosomal recessive germline 7 4783361 GAGGTCAGAGCCGTGGGCCAGGGCGTGCTACGAGCGCTGGAGAGCCGGCAGCCTGAGGGAC 121908749 57834 NM_000492.3(CFTR):c.223C>T (p.Arg75Ter) CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline;unknown 7 117509092 AAAAATCCTAAACTCATTAATGCCCTTCGGCGATGTTTTTTCTGGAGATTTATGTTCTATG 727502770 172187 NM_005360.4(MAF):c.176C>T (p.Pro59Leu) MAF May 07, 2015 MedGen:C1832812,OMIM:601088,Orphanet:ORPHA477668 Ayme-gripp syndrome de novo;germline 16 79599727 TCATCGCCGGGGGCTCGCTGTCCTCCACCCCCATGAGCACGCCGTGCAGCTCGGTGCCCCC 546989392 202783 NM_006493.2(CLN5):c.595C>T (p.Arg199Ter) CLN5 May 26, 2017 MedGen:C0027877,OMIM:214200,Orphanet:ORPHA216,SNOMED CT:42012007;MedGen:CN517202 Neuronal ceroid lipofuscinosis;not provided germline 13 76996010 CAACTTGGCAACTGTACATTTCCCCATCTCCGACCTGAAATGGATGCCCCTTTCTGGTGTA 118203957 16237 NM_001038603.2(MARVELD2):c.1498C>T (p.Arg500Ter) MARVELD2 Sep 07, 2016 MedGen:C4017220;MedGen:CN043648,Orphanet:ORPHA87884;MedGen:CN517202 Deafness, neurosensory, autosomal recessive 49;Nonsyndromic hearing loss and deafness;not provided germline 5 69433088 ATGAGCAGATTGCCACATCATTCGGAAAGCCGACAGGTTAGTATGTGCAGCTGCCTAGGAG 61750089 106231 NM_000552.4(VWF):c.4382C>T (p.Ala1461Val) VWF Sep 20, 2016 MedGen:CN517202;MedGen:CN169374 not provided;not specified germline 12 6019036 ACGAGATCGTTAGCTACCTCTGTGACCTTGCCCCTGAAGCCCCTCCTCCTACTCTGCCCCC 869312890 226690 NM_139276.2(STAT3):c.454C>T (p.Arg152Trp) STAT3 Oct 30, 2014 MedGen:C4014795,OMIM:615952,Orphanet:ORPHA438159 Autoimmune disease, multisystem, infantile-onset, 1 de novo 17 42339328 CAGATGCTGGAGCAGCACCTTCAGGATGTCCGGAAGAGAGTGCAGGTGATGCAAGTTACAA 587777206 107254 NM_173812.4(DPY19L2):c.892C>T (p.Arg298Cys) DPY19L2 Mar 10, 2014 MedGen:C3151407,OMIM:613958 Spermatogenic failure 9 germline 12 63624101 GCCACCCGTGTGATGTGGACACCACCTCTCCGTGAAAGTTTTTCCTATCCTTTCCTTGTAC 121917866 15490 NM_000097.5(CPOX):c.991C>T (p.Arg331Trp) CPOX May 01, 2001 MedGen:C0342856,SNOMED CT:190915002 Coproporphyria germline 3 98585622 GATTACTTCTTTATAGCCCATCGTGGAGAACGGCGGGGCATTGGTGGTATCTTTTTTGATG 267606984 166132 NM_001083602.2(PTCH1):c.895C>T (p.Gln299Ter) PTCH1 Jun 14, 1996 MedGen:C0004779,OMIM:109400,Orphanet:ORPHA377,SNOMED CT:69408002 Gorlin syndrome germline 9 95479122 TGCAGCGCCCATGCCCTGCAGACCATGTTCCAGTTAATGACTCCCAAGCAAATGTACGAGC 104893739 19904 NM_023067.3(FOXL2):c.586C>T (p.Gln196Ter) FOXL2 Sep 01, 2003 MedGen:C0220663,OMIM:110100,Orphanet:ORPHA126 Blepharophimosis, ptosis, and epicanthus inversus germline 3 138946137 TACGGCTACCTGGCGCCCCCCAAGTACCTGCAGTCTGGCTTCCTCAACAACTCGTGGCCGC 140583 260073 NM_000138.4(FBN1):c.2581C>T (p.Arg861Ter) FBN1 Mar 20, 2017 MedGen:CN229799;MedGen:CN517202;MedGen:CN169374 Marfan Syndrome/Loeys-Dietz Syndrome/Familial Thoracic Aortic Aneurysms and Dissections;not provided;not specified germline 15 48495219 GGCACTTGCTGGCAGACTGTCATTGATGGGCGATGTGAGATCAACATCAATGGAGCCACCT 879253797 213919 NM_003119.3(SPG7):c.2249C>T (p.Pro750Leu) SPG7 - MedGen:C1846564,OMIM:607259,Orphanet:ORPHA99013 Spastic paraplegia 7 germline 16 89556954 ATGAGGACATTGAGGCTCTCATTGGCCCGCCGCCCCATGGGCCGAAGAAAATGATCGCACC 780068818 415056 NM_000255.3(MUT):c.454C>T (p.Arg152Ter) MUT Apr 14, 2017 MedGen:CN517202 not provided germline 6 49457990 ACACATCGTGGCTATGATTCAGACAACCCTCGAGTTCGTGGTGATGTTGGAATGGCTGGAG 61750648 105336 NM_000350.2(ABCA4):c.6316C>T (p.Arg2106Cys) ABCA4 Apr 08, 2016 MeSH:C535804,MedGen:C1855465,OMIM:248200;MedGen:CN517202 Stargardt disease 1;not provided germline 1 94001072 GAGCCCACCACAGGGATGGACCCCCAGGCACGCCGCATGCTGTGGAACGTCATCGTGAGCA 199476352 79017 NM_000487.5(ARSA):c.256C>T (p.Arg86Trp) ARSA Oct 10, 2016 MedGen:C0023522,OMIM:250100,Orphanet:ORPHA512,SNOMED CT:396338004;MedGen:CN517202 Metachromatic leukodystrophy;not provided unknown 22 50627375 GCCGCCCTCCTGACCGGCCGGCTCCCGGTTCGGATGGGCATGTACCCTGGCGTCCTGGTGC 397515400 48034 NM_007171.3(POMT1):c.1241C>T (p.Thr414Met) POMT1 Feb 07, 2013 MedGen:C1836373,OMIM:609308,Orphanet:ORPHA86812 Limb-girdle muscular dystrophy-dystroglycanopathy, type C1 germline 9 131513331 TCCACGGCATGACCACCCGCTCCCTGAACACGTGAGTGTGCCCGCCGTCTGCTCTGCTGCA 121913314 27612 NM_198291.2(SRC):c.1591C>T (p.Gln531Ter) SRC Jul 14, 2015 MedGen:C4016406;MeSH:D009369,MedGen:C0027651,SNOMED CT:108369006 Colon cancer, advanced;Neoplasm somatic 20 37403359 GACTACTTCACGTCCACCGAGCCCCAGTACCAGCCCGGGGAGAACCTCTAGGCACAGGCGG 786205229 188147 NM_153816.5(SNX14):c.1132C>T (p.Arg378Ter) SNX14 May 01, 2015 MedGen:C4225355,OMIM:616354,Orphanet:ORPHA397709 Spinocerebellar ataxia, autosomal recessive 20 germline 6 85543737 TTGTTAGAGGAATTTAATGATAGAATTTTACGACCAGAATTATCAAATGATGAAATGCTGT 199476096 23238 NM_001009944.2(PKD1):c.11512C>T (p.Gln3838Ter) PKD1 Jan 01, 1996 MedGen:C0085413,OMIM:173900,SNOMED CT:28728008 Polycystic kidney disease, adult type germline 16 2091806 GAGGAGAGCCGCGACCGGCTGCGCTTCCTGCAGCTGCACAACTGGCTGGACAACAGGTGGG 104894697 29869 NM_005543.3(INSL3):c.278C>T (p.Pro93Leu) INSL3 Sep 01, 2003 Human Phenotype Ontology:HP:0000028,MedGen:C0010417,OMIM:219050 Cryptorchidism, unilateral or bilateral germline 19 17816972 GTAATCTCACGCTGGGACCTGGCCTGCAGCCCCTGCCCCAGACCTCTCACCATCACCGCCA 121918327 16186 NM_152618.2(BBS12):c.1063C>T (p.Arg355Ter) BBS12 Sep 08, 2017 MedGen:C0752166,OMIM:209900,Orphanet:ORPHA110,SNOMED CT:5619004;MedGen:C1859570,OMIM:615989 Bardet-Biedl syndrome;Bardet-Biedl syndrome 12 germline;maternal 4 122742955 GTGATCAAGGAATTGCAGAATCAGCCTGTGCGAATAGTTCTCATTGAGGGTGACCTCACAG 28939720 20772 NM_201253.2(CRB1):c.2234C>T (p.Thr745Met) CRB1 Oct 01, 1999 MedGen:C1838647,OMIM:600105;MedGen:CN517202 Retinitis pigmentosa 12;not provided germline 1 197427559 ACACCATCAGCCTCTCCATGTTTGTCCGAACGCTTCAACCATCAGGCTTACTTCTAGCTTT 753662330 433328 NM_000109.3(DMD):c.2461C>T (p.Gln821Ter) DMD Mar 09, 2017 MedGen:CN169374 not specified germline X 32491414 CTAAGTGAGAGACTTAACTGGCTGGAGTATCAGAACAACATCATCGCTTTCTATAATCAGC 398124480 102284 NM_138694.3(PKHD1):c.2452C>T (p.Gln818Ter) PKHD1 Oct 05, 2015 MedGen:C0085548,OMIM:263200,Orphanet:ORPHA731,SNOMED CT:28770003 Autosomal recessive polycystic kidney disease germline 6 52046144 ATTTCTGCTCATCACCTTCACCAGCTCTTACAGAATAATGCCGATGACTTCACATCCAGGT 766317663 187095 NM_016035.4(COQ4):c.190C>T (p.Pro64Ser) COQ4 Jun 07, 2016 MedGen:C4225392,OMIM:616276,Orphanet:ORPHA457185 Coenzyme Q10 deficiency, primary, 7 germline 9 128323135 GCCGGCTCCGCGGCGATGGCGCTCTATAACCCCTACCGCCACGGTAAGGCCGCCCGCGCCT 41298133 26887 NM_000260.3(MYO7A):c.700C>T (p.Gln234Ter) MYO7A Mar 11, 2010 MedGen:C1568247,OMIM:276900,Orphanet:ORPHA231169;MedGen:C1848638 Usher syndrome, type 1;Usher syndrome, type 1B germline 11 77156969 CGGGGCGCCATCGAGGGCGCGAAGATTGAGCAGTACCTGCTGGAAAAGTCACGTGTCTGTC 121917748 27914 NM_001040142.1(SCN2A):c.562C>T (p.Arg188Trp) SCN2A Apr 01, 2004 MedGen:C1843140,OMIM:607745,Orphanet:ORPHA140927 Benign familial neonatal-infantile seizures germline 2 165308751 GGCTTTTGTTTAGAAGATTTCACATTTTTACGGGATCCATGGAATTGGTTGGATTTCACAG 61732144 18865 NM_000017.3(ACADS):c.319C>T (p.Arg107Cys) ACADS Aug 07, 2017 MedGen:C0342783,OMIM:201470,Orphanet:ORPHA26792,SNOMED CT:124166007;MedGen:CN517202 Deficiency of butyryl-CoA dehydrogenase;not provided germline;unknown 12 120737094 GCCTACGCCATCGCCATGGAGGAGATCAGCCGTGGCTGCGCCTCCACCGGAGTCATCATGA 121908015 18794 NM_000375.2(UROS):c.10C>T (p.Leu4Phe) UROS Jan 01, 1992 MedGen:C0162530,OMIM:263700,Orphanet:ORPHA79277 Congenital erythropoietic porphyria germline 10 125816490 TATAAGGACTGCCAGGCAATAATGAAGGTTCTTTTACTGAAGGATGCGAAGGAAGATGACT 864321711 217256 NM_172107.3(KCNQ2):c.2147C>T (p.Thr716Ile) KCNQ2 - MedGen:C3150986,OMIM:613720,Orphanet:ORPHA439218 Early infantile epileptic encephalopathy 7 maternal 20 63407116 CCGCGCCCCCTGTCCAGTGTCCGCCCTCCACCTCCTGGCAGCCACAGAGCCACCCGCGCCA -1 446139 NM_152296.4(ATP1A3):c.2806C>T (p.Gln936Ter) ATP1A3 Aug 08, 2017 MedGen:CN517202 not provided germline 19 41968798 ATCTGCAAGACCCGGAGGAACTCGGTCTTCCAGCAGGGCATGAAGTGAGGGCCGGGGGCAC 797044808 204265 NM_000084.4(CLCN5):c.100C>T (p.Arg34Ter) CLCN5 Sep 25, 2014 MedGen:C1848336,OMIM:300009 Dent disease 1 germline X 50070025 AGAGAGAAGTCTCGAGACCGGGATAGGCACCGAGAGGTAAGACAAAAGATGGCACATGGGT 1057518083 360017 NM_001376.4(DYNC1H1):c.2327C>T (p.Pro776Leu) DYNC1H1 Nov 15, 2016 MedGen:CN517202 not provided germline 14 101986552 ACAAAGCCCATCAAGCAAACCAGCTTTACCCGTTTGCCATCTCACTGATCGAGAGCGTTCG 61736969 167472 NM_014832.4(TBC1D4):c.2050C>T (p.Arg684Ter) TBC1D4 Aug 14, 2014 MedGen:C4015183,OMIM:616087 Diabetes mellitus, noninsulin-dependent, 5 germline 13 75324385 TTTTCTGTACTCAGCAATCTTTCGTCAGTTCGACGCATGTACAAGGAGAGTAATTCTTCCT 1030017847 353996 NM_172107.3(KCNQ2):c.1053C>T (p.Leu351=) KCNQ2 Mar 31, 2016 MedGen:C3150986,OMIM:613720,Orphanet:ORPHA439218 Early infantile epileptic encephalopathy 7 germline 20 63433874 GTCGGCCTGGAGATTCTACGCCACCAACCTCTCGCGCACAGACCTGCACTCCACGTGGCAG 200032855 185685 NM_030813.5(CLPB):c.803C>T (p.Thr268Met) CLPB Sep 14, 2016 MedGen:C4225393,OMIM:616271,Orphanet:ORPHA445038 3-methylglutaconic aciduria with cataracts, neurologic involvement, and neutropenia germline 11 72358942 TGAACAACCGCGCCAGTTTCAAGGGCTGCACGGCCTTGCACTATGCTGTTCTTGCTGATGA 139607673 430990 NM_000463.2(UGT1A1):c.1006C>T (p.Arg336Trp) UGT1A1 Jun 07, 2017 MedGen:CN119421,Orphanet:ORPHA205 Crigler-Najjar syndrome inherited 2 233767858 TGCTCTTTTTGCCCCTCCCAGGTCCTGTGGCGGTACACTGGAACCCGACCATCGAATCTTG -1 446742 NM_000206.2(IL2RG):c.421C>T (p.Gln141Ter) IL2RG Aug 28, 2017 MedGen:CN517202 not provided germline X 71110537 CAGCTCCAGGACCCACGGGAACCCAGGAGACAGGCCACACAGATGCTAAAACTGCAGAATC 267607203 20760 NM_194456.1(KRIT1):c.1363C>T (p.Gln455Ter) KRIT1 Aug 07, 2017 MedGen:C1861784,OMIM:116860;MedGen:C1366911;MedGen:CN517202;MedGen:CN169374 Cerebral cavernous malformation;Cerebral cavernous malformations 1;not provided;not specified germline 7 92222870 CAGCAGATAATGGAAGGAATGCGTCTCTCTCAAGAAACTCAGCAATATTTCACTATATGGA 764527706 432593 NM_000038.5(APC):c.6496C>T (p.Arg2166Ter) APC Jul 22, 2017 MedGen:CN517202 not provided germline 5 112842090 GAAAAACCCTTTACAAGTAATAAAGGCCCACGAATTCTAAAACCAGGGGAGAAAAGTACAT 188017299 462205 NM_003482.3(KMT2D):c.12019C>T (p.Gln4007Ter) KMT2D Jun 29, 2017 MedGen:C0796004,Orphanet:ORPHA2322,SNOMED CT:313426007 Kabuki syndrome germline 12 49032686 CTTGGCCCTGGCATGCCAGCAAAGCCTCTTCAACACTTTTCTAGCCCTGGAGCCCTGGGTC 121908139 19456 NM_020919.3(ALS2):c.2143C>T (p.Gln715Ter) ALS2 Feb 10, 2011 MedGen:C1846588,OMIM:607225 Infantile-onset ascending hereditary spastic paralysis germline 2 201744285 TTCTATTCAAAACTAAGTGATATCAAATCTCAGATTCTCAGGCCTCTTCTCAGTTTAGGTA 1057519566 260445 NM_005918.3(MDH2):c.620C>T (p.Pro207Leu) MDH2 Feb 08, 2017 MedGen:CN240510,OMIM:617339;Human Phenotype Ontology:HP:0007105,MedGen:C1856408 Epileptic encephalopathy, early infantile, 51;Infantile encephalopathy germline;inherited 7 76063579 TTGGTGGCCATGCTGGGAAGACCATCATCCCCCTGATCTCTCAGGTACACGCATATGACCC 1057519312 361892 NM_139312.2(YME1L1):c.616C>T (p.Arg206Trp) YME1L1 Feb 21, 2018 MedGen:C4310628,OMIM:617302 Optic atrophy 11 germline 10 27136371 GTATTGTTTTATTTAGTTTTCATACAGTCTCGGGGTTTTAAAACTTTGAAATCAAGGACAC 1085307405 414382 NM_000020.2(ACVRL1):c.199C>T (p.Arg67Trp) ACVRL1 - MedGen:C1832529 Pulmonary arterial hypertension related to hereditary hemorrhagic telangiectasia germline 12 51913236 CGGGAGGAGGGGAGGCACCCCCAGGAACATCGGGGCTGCGGGAACTTGCACAGGGAGCTCT 72549369 17995 NM_000379.3(XDH):c.445C>T (p.Arg149Cys) XDH Apr 01, 2001 MedGen:C0268118,OMIM:278300,Orphanet:ORPHA93601,SNOMED CT:124147007 Deficiency of xanthine oxidase germline 2 31397718 TTTTTTCCTTGGCCCACAGGAAATCTGTGCCGCTGCACAGGCTACAGACCCATCCTCCAGG 121918132 15479 NM_005581.4(BCAM):c.691C>T (p.Arg231Ter) BCAM Mar 01, 2007 MedGen:C4017284 BLOOD GROUP--LUTHERAN NULL germline 19 44813527 ACCCTCTACCTGCGGCTCCGCAAGGATGACCGAGACGCCAGCTTCCACTGCGCCGCCCACT 120074167 18218 NM_138477.2(CDAN1):c.2015C>T (p.Pro672Leu) CDAN1 Jul 25, 2017 MedGen:C0271933,OMIM:224120,Orphanet:ORPHA98869,SNOMED CT:59548005;MedGen:CN517202 Congenital dyserythropoietic anemia, type I;not provided germline 15 42730757 TGACTGAGCTCTGGCCCTCCCAGGTCCCTCCGGTCCTGGATGTGCGGACTCTGCTGCAGCG 45517340 59148 NM_000548.4(TSC2):c.4375C>T (p.Arg1459Ter) TSC2 Nov 23, 2015 MedGen:C1860707,OMIM:613254;MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000;MedGen:CN517202 Tuberous sclerosis 2;Tuberous sclerosis syndrome;not provided germline 16 2084597 TCCCCCCGCTCGCCCAGTGGCCTCCGGCCCCGAGGTTACACCATCTCCGACTCGGCCCCAT 72664290 427065 NM_001171.5(ABCC6):c.600+23C>T ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16214301 AGCAGTCTGTAAGTCACCAAGTTCCAACCTCATTCCTGTTCCACTTTGAGGTCTCAGTCTC 972341316 469581 NM_001128849.1(SMARCA4):c.1141C>T (p.Arg381Ter) SMARCA4 Jul 15, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C2750074,OMIM:613325 Hereditary cancer-predisposing syndrome;Rhabdoid tumor predisposition syndrome 2 germline 19 10989339 GCTCCCAGGCTGCAGGCTCGCATCGCACACCGAATTCAGGAACTTGAAAACCTTCCCGGGT 1135401733 263009 NM_031844.2(HNRNPU):c.1714C>T (p.Arg572Ter) HNRNPU Oct 26, 2016 Human Phenotype Ontology:HP:0200134,MedGen:C0543888 Epileptic encephalopathy de novo 1 244856757 TGTCTTGGGAAATTTATTGAGATTGCTGCCCGAAAGAAGCGAAATTTTATTCTGGATCAGG 764742792 417115 NM_019098.4(CNGB3):c.1063C>T (p.Arg355Ter) CNGB3 Mar 27, 2017 MedGen:C1849792,OMIM:262300 Achromatopsia 3 germline 8 86643866 TTTGCATCTATTCTCTCTGACAGAGTTATTCGAACAACTGGATACTTGCTGTTTATTCTGC 63750899 32136 NM_000249.3(MLH1):c.1942C>T (p.Pro648Ser) MLH1 Sep 06, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:C1333991,OMIM:609310;MedGen:C0265325,OMIM:276300,Orphanet:ORPHA252202,SNOMED CT:61665008 Hereditary cancer-predisposing syndrome;Lynch syndrome;Lynch syndrome II;Turcot syndrome germline 3 37048562 GGATTACCCCTTCTGATTGACAACTATGTGCCCCCTTTGGAGGGACTGCCTATCTTCATTC 1085307859 414820 NM_018328.4(MBD5):c.688C>T (p.Gln230Ter) MBD5 Mar 24, 2017 MedGen:CN517202 not provided germline 2 148468631 GGCCTGCCCAGCCCAGCGTCATCAGGTTCCCAGATATATGGAGATGGTTCAATCTCTCCAA 770501034 244526 NM_018972.2(GDAP1):c.769C>T (p.Arg257Ter) GDAP1 Apr 12, 2016 MedGen:CN517202 not provided germline 8 74364059 GCAGACGTCTCACTCGCTGTCACATTGCATCGACTGAAGTTCCTGGGGTTTGCAAGGAGAA 387906798 39122 NM_001244008.1(KIF1A):c.764C>T (p.Ala255Val) KIF1A Jun 01, 2015 MedGen:C1835896,OMIM:610357,Orphanet:ORPHA101010 Spastic paraplegia 30, autosomal recessive germline 2 240783773 GCCTGGTGGACCTGGCTGGGAGCGAGCGGGCTGACTCCACGGGAGCCAAGGGCACGCGCCT 104894834 38452 NM_000169.2(GLA):c.334C>T (p.Arg112Cys) GLA Mar 09, 2017 Human Phenotype Ontology:HP:0001071,MedGen:C0002986,OMIM:301500,Orphanet:ORPHA324,SNOMED CT:16652001;Human Phenotype Ontology:HP:0001071,MedGen:C0002986,OMIM:301500,Orphanet:ORPHA324,SNOMED CT:16652001;MedGen:CN517202 Fabry disease;Fabry disease;not provided germline X 101403846 TCAGAAGGCAGACTTCAGGCAGACCCTCAGCGCTTTCCTCATGGGATTCGCCAGCTAGCTA 202060209 31158 NM_006516.2(SLC2A1):c.274C>T (p.Arg92Trp) SLC2A1 Sep 13, 2017 MedGen:C1842534,OMIM:612126,Orphanet:ORPHA98811;MedGen:CN517202 GLUT1 deficiency syndrome 2;not provided germline 1 42931047 TCTGTGGGCCTTTTCGTTAACCGCTTTGGCCGGTAAGTAGGAGAGGTCCTGGCACTGCCCT 753933273 207363 NM_020732.3(ARID1B):c.2149C>T (p.Gln717Ter) ARID1B Aug 14, 2017 MedGen:C3281201,OMIM:614562;MedGen:CN517202 Mental retardation, autosomal dominant 12;not provided germline 6 157084773 AGCAGCCAAGGGGATCAGAGCAACCCGGCGCAGTCGCCTTTCTCCCCACATGCGTCCCCTC 386834034 71243 NM_017739.3(POMGNT1):c.643C>T (p.Arg215Ter) POMGNT1 Jun 14, 2017 MedGen:C3150412,OMIM:613151;MedGen:C0457133,OMIM:253280,Orphanet:ORPHA588,SNOMED CT:277950001;MedGen:CN517202 Congenital muscular dystrophy-dystroglycanopathy with mental retardation, type B3;Muscle eye brain disease;not provided germline;inherited 1 46194853 GGCTGGAGGGACACATGGGCCTTCGTGGGACGAAAAGGAGGTGCCGGCATCAGAGGCCATC 1057518750 359146 NM_138773.3(SLC25A46):c.998C>T (p.Pro333Leu) SLC25A46 Jan 14, 2017 MedGen:C4225302,OMIM:616505 NEUROPATHY, HEREDITARY MOTOR AND SENSORY, TYPE VIB germline 5 110761523 CCAGTCTTTGTTCTGACGTTATACTTTACCCATTGGAAACAGTTTTGCACCGCCTTCACAT 1057518128 360144 NM_001271.3(CHD2):c.340C>T (p.Arg114Ter) CHD2 Aug 05, 2016 MedGen:CN517202 not provided germline 15 92927289 CCTGATGTTTATGGGGTCAGGCGGTCAAACCGAAGCAGACAAGAACCATCGCGATTTAATA 118203680 58103 NM_000368.4(TSC1):c.2341C>T (p.Gln781Ter) TSC1 Nov 19, 2016 MedGen:C1854465,OMIM:191100;MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000 Tuberous sclerosis 1;Tuberous sclerosis syndrome germline 9 132902655 ATGGTAACCAAGCTCCACAGCCAGATCAGACAGCTGCAGCATGACCGAGAGGAATTCTACA 587776939 48500 NM_020964.2(EPG5):c.4588C>T (p.Gln1530Ter) EPG5 Feb 14, 2013 MedGen:C1855772,OMIM:242840,Orphanet:ORPHA1493 Absent corpus callosum cataract immunodeficiency germline 18 45901054 CCAGTTATTTCCTCTGCTGTGCTATTGAGTCAGAAGGACGCCACCCAGCTGGTGTGCACAG 886041128 265168 NM_000044.4(AR):c.1822C>T (p.Arg608Ter) AR Aug 01, 2016 MedGen:CN517202 not provided germline X 67686063 AGCAGAAATGATTGCACTATTGATAAATTCCGAAGGAAAAATTGTCCATCTTGTCGTCTTC 1114167449 419013 NM_025139.5(ARMC9):c.1559C>T (p.Pro520Leu) ARMC9 Nov 20, 2017 MedGen:CN262509;MedGen:CN399089,OMIM:617622 ARMC9-related Joubert syndrome;JOUBERT SYNDROME 30 germline;maternal 2 231282066 TGGTTTTTTTCCTCCCCTTAAAGATACAGCCGTATGTGAATGGAGCTCTGTACAGCATCCT 1057517829 359421 NM_000348.3(SRD5A2):c.542C>T (p.Pro181Leu) SRD5A2 Mar 23, 2015 MedGen:CN517202 not provided germline 2 31531376 GGAAGCCTGGAGAAATCAGCTACAGGATTCCACAAGGTAATGTCTCCCCTGCCCCCAGACT 398122966 96872 NM_001199107.1(TBC1D24):c.118C>T (p.Arg40Cys) TBC1D24 Dec 22, 2014 MedGen:C1857345,OMIM:220500 Digitorenocerebral syndrome germline 16 2496266 ACTGAACTGCAGGAACTGAAGCAGCTGGCGCGCCAGGGCTACTGGGCCCAAAGCCACGCCC 587781756 151166 NM_002878.3(RAD51D):c.451C>T (p.Gln151Ter) RAD51D Sep 26, 2017 MedGen:C3280345,OMIM:614291;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 4;Hereditary cancer-predisposing syndrome;not provided germline;unknown 17 35107017 CTGACAGCTTCCCGCCTCCTCCAGCTGCTTCAGGCTAAAACCCAGGATGAGGAGGAACAGG 758004953 273730 NM_000293.2(PHKB):c.1546C>T (p.Gln516Ter) PHKB Jul 14, 2016 MedGen:C0543514,OMIM:261750,Orphanet:ORPHA79240 Glycogen storage disease IXb germline 16 47641630 CTTCAAGTTTTTCTGAACACATATGGTATTCAAACTCAAACTCCTCAACAAGTAGAACCCA 750095738 273494 NM_000271.4(NPC1):c.3229C>T (p.Arg1077Ter) NPC1 Jul 05, 2016 MedGen:C3179455,OMIM:257220 Niemann-Pick disease type C1 germline 18 23536689 GAAACCATGGGCATTAACGGCAGTGCCTACCGAGTATTTCCTTACAGGTAAAGCCTGCCCT 144809928 259931 NM_000197.1(HSD17B3):c.845C>T (p.Pro282Leu) HSD17B3 May 05, 2016 MedGen:C0033804;MedGen:CN517202 Pseudohermaphroditism;not provided germline 9 96235548 TGTTTAAGGCGGGCTTTCTGAGCCTGATCCCGGCCTGGGCCTTCTACAGCGGTGCCTTCCA 794726839 187728 NM_001165963.1(SCN1A):c.4985C>T (p.Ala1662Val) SCN1A Dec 20, 2014 MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002 Severe myoclonic epilepsy in infancy de novo 2 165992290 GAGCAAAGGGGATCCGCACGCTGCTCTTTGCTTTGATGATGTCCCTTCCTGCGTTGTTTAA 1060499792 389235 NG_008835.1:g.285670C>T CDH23 Jun 04, 2016 MedGen:C1832394,OMIM:601386 Deafness, autosomal recessive 12 germline 10 71677616 ATCAATGTGTTGGATGTCAACGACAACGTGCCCACCTTCCAGAAGGATGCCTACGTGGGTG 139644798 260554 NM_002887.3(RARS):c.1367C>T (p.Ser456Leu) RARS - MedGen:C4015323,OMIM:616140,Orphanet:ORPHA438114 Leukodystrophy, hypomyelinating, 9 germline 5 168510601 CATTTTTTAGGAAAAAGTTTAAAACACGTTCGGGTGAAACAGTGCGCCTCATGGATCTTCT 794726739 187701 NM_001165963.1(SCN1A):c.5674C>T (p.Arg1892Ter) SCN1A Dec 20, 2014 MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002;MedGen:CN517202 Severe myoclonic epilepsy in infancy;not provided de novo;germline 2 165991601 ATGGATGCTCTACGAATACAGATGGAAGAGCGATTCATGGCTTCCAATCCTTCCAAGGTCT -1 445848 NM_018488.3(TBX4):c.709C>T (p.Gln237Ter) TBX4 Jul 21, 2017 MedGen:CN517202 not provided germline 17 61479887 ACCCTATGTGTTTTCTCCCCACAGATCACCCAGCTGAAAATTGAGAACAACCCTTTTGCCA 387906612 38618 NM_005266.6(GJA5):c.145C>T (p.Gln49Ter) GJA5 Oct 01, 2010 MedGen:C3279693,OMIM:614049 Atrial fibrillation, familial, 11 germline 1 147759094 ACAGCTGCTGAGTCTTCCTGGGGGGATGAGCAGGCTGATTTCCGGTGTGATACGATTCAGC 397508037 67420 NM_000059.3(BRCA2):c.9109C>T (p.Gln3037Ter) BRCA2 Apr 22, 2016 MedGen:C2675520,OMIM:612555 Breast-ovarian cancer, familial 2 germline 13 32379905 TTAGCAGCGACAAAAAAAACTCAGTATCAACAACTACCGGTACAAACCTTTCATTGTAATT -1 445703 NM_144997.6(FLCN):c.649C>T (p.Gln217Ter) FLCN Sep 01, 2017 MedGen:CN517202 not provided germline 17 17222631 GTGTTTGAGGCAGAGCAGTTTGGATGCCCACAGCGTGCTCAGAGGATGAACACAGCCTTCA 281874741 36084 NM_000495.4(COL4A5):c.4501C>T (p.Gln1501Ter) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108687685 TATGTACAAGGAAATAAAAGAGCCCACGGTCAAGACTTGGGTGAGATAATCAATATCTAAT 121917755 27827 NM_003000.2(SDHB):c.299C>T (p.Ser100Phe) SDHB Jan 01, 2004 Human Phenotype Ontology:HP:0002666,MedGen:C0031511,OMIM:171300 Pheochromocytoma somatic 1 17028724 AATGTGTGTCTCTTTCAGGCATCTGTGGCTCTTGTGCAATGAACATCAATGGAGGCAACAC 267606990 28388 NM_002834.4(PTPN11):c.5C>T (p.Thr2Ile) PTPN11 Feb 10, 2016 MeSH:D009634,MedGen:C0028326,Orphanet:ORPHA648,SNOMED CT:205824006;MedGen:C0041409,OMIM:163950;MedGen:CN517202 Noonan syndrome;Noonan syndrome 1;not provided germline 12 112419116 TCGCGGAGCCGGAGGGCGGGAGGAACATGACATCGCGGAGGTGAGGAGCCCCGAGGGGCCC 63750488 96660 NM_000251.2(MSH2):c.715C>T (p.Gln239Ter) MSH2 Apr 18, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:C2936783,OMIM:120435 Hereditary cancer-predisposing syndrome;Lynch syndrome;Lynch syndrome I germline;unknown 2 47412483 AAAGCTGACTTTTCCACAAAAGACATTTATCAGGACCTCAACCGGTTGTTGAAAGGCAAAA 876658770 233438 NM_005732.3(RAD50):c.3715C>T (p.Arg1239Ter) RAD50 Aug 07, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 5 132640768 GCCTTGGATGAGCCAACAACAAATCTTGACCGAGAAAACATTGAATCTCTTGCACATGCTC -1 485471 NM_032043.2(BRIP1):c.2218C>T (p.Gln740Ter) BRIP1 Nov 16, 2015 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 17 61744471 GGAGAAAAAACAAATTTTGATGAATTACTGCAGGTGTACTATGACGCAATCAAATACAAAG 886041321 264821 NM_004614.4(TK2):c.103C>T (p.Gln35Ter) TK2 Aug 10, 2016 MedGen:CN517202 not provided germline 16 66549959 CCGGCCTCAGGCCCCGGGCCGCGGAGGGTGCAGCGCCGGGCCTGGCCTCCCGGTAACGCGC 137852896 17802 NM_024312.4(GNPTAB):c.310C>T (p.Gln104Ter) GNPTAB May 10, 2012 MedGen:C2673377,OMIM:252500,Orphanet:ORPHA576 I cell disease germline 12 101789951 CAGCAGGTCAGAGAACAGATGGAGGAGGAGCAGAAAGCAATGAGGTAAAACTGATTTTTTT 398123117 98252 NM_000038.5(APC):c.2365C>T (p.Gln789Ter) APC Jun 16, 2016 MedGen:C2713442,OMIM:175100;MedGen:C0027672,SNOMED CT:699346009 Familial adenomatous polyposis 1;Hereditary cancer-predisposing syndrome germline 5 112837959 TTAAGTCCCAAGGCATCTCATCGTAGTAAGCAGAGACACAAGCAAAGTCTCTATGGTGATT 132630329 25984 NM_001205019.1(GK):c.1255C>T (p.Arg419Ter) GK Aug 01, 1998 MedGen:C0268418,OMIM:307030,Orphanet:ORPHA308993,SNOMED CT:124322002 Deficiency of glycerol kinase germline X 30720639 GGTTTATTTAAGATTTTGGATGCCATGAATCGAGACTGTGGAATTCCACTCAGTCATTTGC 121918141 15695 NM_000312.3(PROC):c.1042C>T (p.Arg348Ter) PROC Aug 01, 1992 MedGen:C2674321,OMIM:176860 Thrombophilia, hereditary, due to protein C deficiency, autosomal dominant germline 2 127428602 CTCGTGACGGGCTGGGGCTACCACAGCAGCCGAGAGAAGGAGGCCAAGAGAAACCGCACCT 863223850 209625 NM_003242.5(TGFBR2):c.1279C>T (p.Pro427Ser) TGFBR2 May 18, 2015 MedGen:CN517202 not provided germline 3 30674129 CTATAGGTGGGAACTGCAAGATACATGGCTCCAGAAGTCCTAGAATCCAGGATGAATTTGG -1 466468 NM_004380.2(CREBBP):c.1447C>T (p.Arg483Ter) CREBBP May 16, 2017 MedGen:C0035934,OMIM:180849,Orphanet:ORPHA353277,SNOMED CT:45582004 Rubinstein-Taybi syndrome germline 16 3782810 CCAAATCCCATAGACCCCAGCTCCATGCAGCGAGCCTATGCTGCTCTCGGACTCCCCTACA 755946598 361761 NM_007198.3(PLPBP):c.260C>T (p.Pro87Leu) PLPBP Jan 07, 2017 MedGen:C4310632,OMIM:617290 Epilepsy, early-onset, vitamin b6-dependent germline 8 37766296 CTTTTTCCCCTCAGATTCTGTCTTTGTGTCCTGAGATCAAATGGCACTTCATTGGCCACCT -1 441047 NM_000083.2(CLCN1):c.949C>T (p.Arg317Ter) CLCN1 Jan 22, 2014 MedGen:CN517202 not provided germline 7 143330867 TTTGCAGCCACGTTCAGCGCCTTTGTGTTTCGAGTGCTGGCAGTGTGGAACAAGGATGCTG 28936388 23625 NM_000339.2(SLC12A3):c.625C>T (p.Arg209Trp) SLC12A3 Jan 01, 1996 MedGen:C0268450,OMIM:263800,Orphanet:ORPHA358,SNOMED CT:3188003 Familial hypokalemia-hypomagnesemia germline 16 56870119 CTGATAGGTGGCACCTACTTCCTCATCTCCCGGAGTCTGGGCCCAGAGCTTGGGGGCTCCA 1085307109 227733 NM_205768.2(ZBTB18):c.133C>T (p.Arg45Ter) ZBTB18 Feb 09, 2016 MedGen:CN517202 not provided germline 1 244053907 TGCACTGTTCTGGTGGGAGATGCCCAGTTCCGAGCGCACCGAGCTGTACTGGCTTCATGCA 62625307 69596 NM_007294.3(BRCA1):c.3598C>T (p.Gln1200Ter) BRCA1 Jun 28, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline;unknown 17 43091933 CCTAGCCCTTTCACCCATACACATTTGGCTCAGGGTTACCGAAGAGGGGCCAAGAAATTAG 121434608 26666 NM_001493.2(GDI1):c.208C>T (p.Arg70Ter) GDI1 Jun 01, 1998 MedGen:C3887939,OMIM:300849 X-Linked Mental Retardation 41 germline X 154438819 GAGGGGCCCCCTGAGTCGATGGGCCGAGGCCGAGACTGGAATGTTGACCTGATTCCCAAAT 761493155 203854 NM_000026.3(ADSL):c.1009C>T (p.Arg337Ter) ADSL Mar 13, 2014 MedGen:CN517202 not provided germline 22 40361634 TTTGAACGCACACTGGATGATAGTGCCAACCGGTCAGTGGCACAGGGACATCACATACACC 201740530 94263 NM_172218.2(SPAG1):c.2014C>T (p.Gln672Ter) SPAG1 Apr 19, 2017 MedGen:C3809706,OMIM:615505;MedGen:C3554306,OMIM:615005;MedGen:C0022521,OMIM:244400,Orphanet:ORPHA98861,SNOMED CT:42402006 Ciliary dyskinesia, primary, 28;Epilepsy, nocturnal frontal lobe, 5;Kartagener syndrome germline 8 100233436 GCCAGAGCTCTCTGTTACTTGAAGCTGTGCCAGTTTGAAGAAGCAAAGCAGGACTGTGATC 766500689 264009 NM_145861.2(EDARADD):c.196C>T (p.Arg66Ter) EDARADD May 02, 2016 MedGen:CN517202 not provided germline 1 236427427 GAATGTGATACAATTACTTTGAACTGCCCACGAAATTCAGATATGAAAAATCAGGTAAGAA 121909795 22790 NM_001017535.1(VDR):c.454C>T (p.Gln152Ter) VDR Jul 01, 1993 MedGen:C0268690,OMIM:277440,SNOMED CT:72831007 Vitamin D-dependent rickets, type 2 germline 12 47857512 ACCTACGACCCCACCTACTCCGACTTCTGCCAGTTCCGGGTATGTCTGCCTGCTGGGAGGA 398123106 98232 NM_000033.3(ABCD1):c.1771C>T (p.Arg591Trp) ABCD1 Jun 08, 2017 MedGen:C0162309,OMIM:300100,Orphanet:ORPHA43,SNOMED CT:65389002;MedGen:CN517202 Adrenoleukodystrophy;not provided germline X 153740710 GACGTCGTGCACCTGCACCACATCCTGCAGCGGGAGGGAGGTAGGAGGCCTGGGGCTGGCA 759109699 245772 NM_000527.4(LDLR):c.760C>T (p.Gln254Ter) LDLR Mar 25, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11106630 TCTGATGGAAACTGCATCCATGGCAGCCGGCAGTGTGACCGGGAATATGACTGCAAGGACA 398123027 65573 NM_052961.3(SLC26A8):c.2860C>T (p.Arg954Cys) SLC26A8 May 02, 2013 Gene:338331,MedGen:C1847540,OMIM:606766 Spermatogenic failure 3 germline 6 35943953 CAGACTCGGACATGGTCAGTGGAGAGGAGACGCCATCCTATGGATTCATACTCACCAGAGG 104894312 27475 NM_003282.3(TNNI2):c.466C>T (p.Arg156Ter) TNNI2 Nov 25, 2015 Human Phenotype Ontology:HP:0001848,MedGen:C1860450;Human Phenotype Ontology:HP:0005879,MedGen:C1393871;Human Phenotype Ontology:HP:0005684,MedGen:C0265213,Orphanet:ORPHA97120;MedGen:C1834523,OMIM:601680,Orphanet:ORPHA1147;Human Phenotype Ontology:HP:0003049,MedGen:C0231678;MedGen:CN517202 Calcaneovalgus deformity;Congenital finger flexion contractures;Distal arthrogryposis;Distal arthrogryposis type 2B;Ulnar deviation of the wrist;not provided germline;somatic;unknown 11 1841468 CTGCCCTCTCCTCCACAGGAGCGGGACCTGCGAGACGTGGGTGACTGGAGGAAGAACATCG 193302873 40513 NM_002615.6(SERPINF1):c.1132C>T (p.Gln378Ter) SERPINF1 Mar 11, 2011 MedGen:C3279564,OMIM:613982;MedGen:CN517202 Osteogenesis imperfecta, type VI;not provided germline;unknown 17 1777321 GGGGCGGGAACCACCCCCAGCCCAGGGCTGCAGCCTGCCCACCTCACCTTCCCGCTGGACT 777458559 414330 NM_001204.6(BMPR2):c.1771C>T (p.R591*) BMPR2 - MedGen:C0152171,OMIM:178600,SNOMED CT:26174007 Primary pulmonary hypertension germline 2 202555436 GAAAAAAACCGAAATTCAATTAACTATGAACGACAGCAAGCACAAGCTCGAATCCCCAGCC 769183311 380479 NM_001145860.1(POP1):c.1573C>T (p.Pro525Ser) POP1 Apr 10, 2017 MedGen:CN241834,OMIM:617396 Anauxetic dysplasia 2 germline 8 98140867 AATTTGCCCCAAAAGAAGTCCAAAGCTTTGCCCAATCCAGAAAAATGCCAAGGTAAAGTTC 398123757 100145 NM_003482.3(KMT2D):c.7066C>T (p.Gln2356Ter) KMT2D Nov 30, 2012 MedGen:CN030661,OMIM:147920 Kabuki syndrome 1 germline 12 49040704 GGCCTAAGGCCCCAGGAGCCACCCCCTGCCCAGGCTTTGGCACCTTCTCCTCCAAGTCACC 114368325 38634 NM_000782.4(CYP24A1):c.1186C>T (p.Arg396Trp) CYP24A1 Jul 01, 2015 MedGen:C0268080,OMIM:143880,SNOMED CT:34225008;Human Phenotype Ontology:HP:0003394,MedGen:C0026821 Idiopathic hypercalcemia of infancy;Muscle cramps germline;unknown 20 54158136 AGGCTTACGCCGAGTGTACCATTTACAACTCGGACTCTTGACAAGGCAACAGTTCTGGGTG 1060500363 402309 NM_000267.3(NF1):c.79C>T (p.Gln27Ter) NF1 Oct 31, 2017 MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003;MedGen:CN517202 Neurofibromatosis, type 1;not provided germline 17 31156001 TTTTTTTTTCAGCTTCCAATAAAAACAGGACAGCAGAACACACATACCAAAGTCAGTACTG 138358708 226676 NM_001163673.1(WDR81):c.388C>T (p.Arg130Ter) WDR81 Aug 24, 2017 Gene:780925,MedGen:C2750234,OMIM:610185 Cerebellar ataxia, mental retardation, and dysequilibrium syndrome 2 germline 17 1731098 GTGGCCCCAGGGAGTGCCTCAGGCCCCAGCCGACTGAACAGCCGTAAGGAGGCGGGGCTGC 104893668 20595 NM_003896.3(ST3GAL5):c.862C>T (p.Arg288Ter) ST3GAL5 May 01, 2013 MedGen:C1836824,OMIM:609056,Orphanet:ORPHA171714 Amish infantile epilepsy syndrome germline 2 85844542 CTTGCTTGCTTTCCTTAGCCATTCTGGGTACGACTCTTCTTTTGGAAGCAGGTGGCAGAAA 61750172 24394 NM_000180.3(GUCY2D):c.2512C>T (p.Arg838Cys) GUCY2D Dec 15, 2017 MedGen:C1866293,OMIM:601777;MedGen:C1866293,OMIM:601777;MedGen:CN517202 Cone-rod dystrophy 6;Cone-rod dystrophy 6;not provided germline 17 8014700 TCTAGTAACCTGGAGGATCTGATCCGGGAGCGCACGGAGGAGCTGGAGCTGGAAAAGCAGA -1 474083 NM_005732.3(RAD50):c.1093C>T (p.Arg365Ter) RAD50 Jul 31, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C2751318,OMIM:613078,Orphanet:ORPHA240760 Hereditary cancer-predisposing syndrome;Nijmegen breakage syndrome-like disorder germline;unknown 5 132588728 CTGCAAGCAGATCGCCATCAAGAACATATCCGAGCTAGAGATTCATTAATTCAGTCTTTGG 1064794303 411258 NM_000444.5(PHEX):c.151C>T (p.Gln51Ter) PHEX Feb 03, 2017 MedGen:CN517202 not provided germline X 22038501 AGTCAAGGTCTCTTAAGTCTCCAAGCTAAACAGGAGTACTGCCTGAAGCCAGAATGCATCG 104894138 16824 NM_000102.3(CYP17A1):c.286C>T (p.Arg96Trp) CYP17A1 Sep 26, 2016 MedGen:CN042980;MedGen:C0268285,OMIM:202110,SNOMED CT:124220008;MedGen:CN517202 Complete combined 17-alpha-hydroxylase/17,20-lyase deficiency;Deficiency of steroid 17-alpha-monooxygenase;not provided germline 10 102837076 CTTATTAAGAAGGGCAAGGACTTCTCTGGGCGGCCTCAAATGGTAAGTGGTGCCCATCTCC 370115218 221609 NM_024577.3(SH3TC2):c.3154C>T (p.Arg1052Ter) SH3TC2 Nov 16, 2017 MedGen:CN043578;MedGen:CN517202 Charcot-Marie-Tooth disease, type IV;not provided germline 5 149012634 AAGGCTGCTGAGGCCTGGCTTGGGGCGGGGCGACTCCACTACCTCATGCAGGAAGACGAGC 886039536 260311 NM_004006.2(DMD):c.3259C>T (p.Gln1087Ter) DMD Sep 01, 2017 MedGen:CN517202 not provided germline X 32464603 GCCCTTGGGGATTCAGAAATTCTAAAAAAGCAGCTGAAACAGTGCAGAGTAAGATTTTTAT 104894695 19323 NM_021175.3(HAMP):c.166C>T (p.Arg56Ter) HAMP Jan 01, 2003 MedGen:C1865616,OMIM:613313 Hemochromatosis type 2B germline 19 35284953 CCTTCCTTCCCACAGCCCATGTTCCAGAGGCGAAGGAGGCGAGACACCCACTTCCCCATCT 199422168 34446 NM_018136.4(ASPM):c.6232C>T (p.Arg2078Ter) ASPM Sep 01, 2009 MedGen:C1837501,OMIM:608716 Primary autosomal recessive microcephaly 5 not provided 1 197103019 GCTTCAGCTATTATAATTCAGAGATGGTATCGAGGTATTAAAATTACAAACCATCAGCATA -1 481483 NM_015093.5(TAB2):c.1321C>T (p.Arg441Ter) TAB2 Dec 07, 2017 MedGen:C3150216,OMIM:614980 Congenital heart defects, multiple types, 2 de novo 6 149379236 GCCTTTATTCATCACCATCCTCCCAAAAGTCGAGCAATAGGCAATAACTCTGCAACCTCTC 61755814 104593 NM_000322.4(PRPH2):c.715C>T (p.Gln239Ter) PRPH2 Sep 04, 2015 MedGen:CN517202 not provided germline 6 42704478 AACAACTCAGCACACTACAGTTACGACCACCAGACGGAGGAGCTCAACCTGTGGGTGCGTG 863224473 212226 NM_000179.2(MSH6):c.1045C>T (p.Gln349Ter) MSH6 Feb 09, 2015 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Lynch syndrome germline 2 47799028 GCTTTCTCTGCCCCTCAAAATTCTGAATCCCAAGCCCACGTTAGTGGAGGTGGTGATGACA 104894630 21217 NM_004589.3(SCO1):c.521C>T (p.Pro174Leu) SCO1 Nov 01, 2000 MedGen:C0268237,OMIM:220110,Orphanet:ORPHA254905,SNOMED CT:67434000 Hepatic failure, early-onset, and neurologic disorder due to cytochrome C oxidase deficiency germline 17 10692805 TTGGCTTCACTCATTGCCCTGATGTCTGTCCAGAAGAACTAGAAAAGATGATTCAAGTCGT 796053418 203505 NM_001083962.1(TCF4):c.1570C>T (p.Gln524Ter) TCF4 Jun 17, 2014 MedGen:CN517202 not provided germline 18 55232588 AAATCCGATGACGAGGGTGATGAGAACCTGCAAGACACGAAATCTTCGGAGGACAAGAAAT 113994091 33125 NM_004304.4(ALK):c.3452C>T (p.Thr1151Met) ALK Oct 02, 2014 Human Phenotype Ontology:HP:0003006,MeSH:D009447,MedGen:C0027819,OMIM:256700;MedGen:C2751681,OMIM:613014 Neuroblastoma;Neuroblastoma 3 germline;somatic 2 29222407 TCCTCCCCACCCTCCCCTTCTCTGCCCAGACGCTGCCTGAAGTGTGCTCTGAACAGGACGA 121913554 29412 NM_000302.3(PLOD1):c.2008C>T (p.Arg670Ter) PLOD1 Dec 21, 2017 MedGen:C0268342,OMIM:225400,Orphanet:ORPHA1900,SNOMED CT:25606004 Ehlers-Danlos syndrome, hydroxylysine-deficient germline 1 11972977 TCCACCTTCACCATCAACATCGCCCTGAACCGAGTCGGGGTGGATTACGAGGTGAGCAGGA 62642935 98660 NM_000277.2(PAH):c.926C>T (p.Ala309Val) PAH May 26, 2017 MedGen:C0031485,OMIM:261600,Orphanet:ORPHA716,SNOMED CT:154735006;MedGen:CN517202 Phenylketonuria;not provided germline;unknown 12 102846938 TTTTCCCCCAATTACAGGAAATTGGCCTTGCCTCTCTGGGTGCACCTGATGAATACATTGA 1060505041 404685 NM_052876.3(NACC1):c.892C>T (p.Arg298Trp) NACC1 Sep 01, 2017 MedGen:CN241829,OMIM:617393;MedGen:CN517202 Neurodevelopmental disorder with epilepsy, cataracts, feeding difficulties, and delayed brain myelination;not provided de novo;germline 19 13136099 GGTGGCGAGGAGGGCATGGATGAGCAGTACCGGCAGATCTGCAACATGTACACCATGTACA 796052414 207420 NM_018100.3(EFHC1):c.826C>T (p.Arg276Ter) EFHC1 Jan 30, 2015 na Myoclonic epilepsy, juvenile 1 germline 6 52454197 TACTATCTTATGGATGATACGGTGGAAATTCGAGAGGTCCACGAACGGAATGATGGGAGAG 281864782 49806 NM_212472.2(PRKAR1A):c.124C>T (p.Arg42Ter) PRKAR1A Sep 20, 2012 MedGen:C2607929,OMIM:160980 Carney complex, type 1 not provided 17 68515523 AAAGATTCTATTGTGCAGTTGTGCACTGCTCGACCTGAGAGACCCATGGCATTCCTCAGGG 200976093 132835 NM_000051.3(ATM):c.3931C>T (p.Gln1311Ter) ATM Sep 26, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline 11 108284411 GAGGGTACCAGAGACAGTGGGATGGCACAGCAAAGAGAGACTGCTACCAAGGTCTATGATA 879254805 246011 NM_000527.4(LDLR):c.1150C>T (p.Gln384Ter) LDLR Mar 30, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11111603 GGCTACAAGTGCCAGTGTGAGGAAGGCTTCCAGCTGGACCCCCACACGAAGGCCTGCAAGG 147948835 130987 NM_020207.4(ERCC6L2):c.1963C>T (p.Arg655Ter) ERCC6L2 Feb 06, 2014 MedGen:C3810350,OMIM:615715,Orphanet:ORPHA401764 Bone marrow failure syndrome 2 germline 9 95955996 TTGGGAACTGTGGAGGAAATCATGTATTTACGACAGATATACAAGCAGGTAAATATGTTTC 200373703 373823 NM_015087.4(SPART):c.1369C>T (p.Arg457Ter) SPART Jun 09, 2015 MedGen:CN517202 not provided germline 13 36314341 AAGGCAATCCAGAAAGGTGCTTCTAAACTCCGAGAGCGGATTCAACCAGAAGAAAAACCCG 199469464 39865 NM_006662.2(SRCAP):c.7330C>T (p.Arg2444Ter) SRCAP Mar 17, 2017 MedGen:C0729582,OMIM:136140,Orphanet:ORPHA2044,SNOMED CT:312214005;MedGen:CN517202 Floating-Harbor syndrome;not provided germline 16 30737370 GAGCGAGTTCCCAGGCCAGCACCTAGGCCTCGACCCACTCCAGCTTCAGCTCCGGCTGCAA 121908645 21372 NM_000050.4(ASS1):c.835C>T (p.Arg279Ter) ASS1 Aug 22, 2014 MedGen:C0175683,OMIM:215700,Orphanet:ORPHA187 Citrullinemia type I germline;unknown 9 130480446 GTGGAGAACCGCTTCATTGGAATGAAGTCCCGAGGTGAGTCTGCTCAGCCTCCCTCAGGGC 147816470 244160 NM_003172.3(SURF1):c.586C>T (p.Gln196Ter) SURF1 Oct 12, 2017 MedGen:C0023264,OMIM:256000,Orphanet:ORPHA506,SNOMED CT:29570005;MedGen:CN517202 Leigh syndrome;not provided germline 9 133352696 AAAGTGAATCCTGAAACCCGGCAGAAAGGCCAGGTAAGGGACATGGACTCTTCCTACTTTA 1131690915 420510 NM_000321.2(RB1):c.277C>T (p.Gln93Ter) RB1 Jun 09, 2015 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 13 48342611 TTTATTTTTTGTTCCCAGGGAGGTTATATTCAAAAGAAAAAGGAACTGTGGGGAATCTGTA 121918165 16007 NM_181714.3(LCA5):c.835C>T (p.Gln279Ter) LCA5 Jun 14, 2016 MeSH:D030342,MedGen:C0950123;MeSH:D057130,MedGen:C0339527,Orphanet:ORPHA65,SNOMED CT:193413001;MedGen:C1858301,OMIM:604537 Inborn genetic diseases;Leber congenital amaurosis;Leber congenital amaurosis 5 germline 6 79493636 GATGAAAATAAAGTTCTTCAAAAGGAGGTACAGCGACTATATCACAAATTAAAGGTAAGTA 72558472 103262 NM_000531.5(OTC):c.953C>T (p.Ser318Phe) OTC - MedGen:CN517202 not provided unknown X 38411947 CAGAAGAAGTGGATGATGAAGTCTTTTATTCTCCTCGATCACTAGTGTTCCCAGAGGCAGA 769080151 210409 NM_000071.2(CBS):c.1135C>T (p.Arg379Trp) CBS Jan 06, 2015 MedGen:CN517202 not provided germline 21 43060451 CGCTGCGTGGTCATTCTGCCCGACTCAGTGCGGAACTACATGTAAGACACGGCTTCCCTCC 397508227 67950 NM_000492.3(CFTR):c.1573C>T (p.Gln525Ter) CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline 7 117559644 TATAGATACAGAAGCGTCATCAAAGCATGCCAACTAGAAGAGGTAAGAAACTATGTGAAAA 199472990 78275 NM_000238.3(KCNH2):c.2254C>T (p.Arg752Trp) KCNH2 Jan 03, 2017 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MedGen:CN517202 Congenital long QT syndrome;not provided germline 7 150950312 CCCTTCCGAGGGGCCACCAAGGGCTGCCTTCGGGCCCTGGCCATGAAGTTCAAGACCACAC 149010496 404634 NM_006438.4(COLEC10):c.25C>T (p.Arg9Ter) COLEC10 Apr 13, 2017 MedGen:C0796032,OMIM:248340 Malpuech facial clefting syndrome germline 8 119067306 ACAGCAATGAATGGCTTTGCATCCTTGCTTCGAAGAAACCAATTTATCCTCCTGGTACTAT 72657393 240068 NM_001277115.1(DNAH11):c.10324C>T (p.Gln3442Ter) DNAH11 Jan 16, 2016 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244 Ciliary dyskinesia germline 7 21808041 CTGGTGCACTGCAAGTGGGTTCCCTTTCTTCAACAGAAGGTAAGTTCAGTTCCTTACCTTG 869312923 226909 NM_017890.4(VPS13B):c.2410C>T (p.Gln804Ter) VPS13B Mar 31, 2014 MeSH:D030342,MedGen:C0950123 Inborn genetic diseases germline 8 99192952 CCAAATCTCACAATTCAAGCTACAAGAGCACAGACACTTCTCTTGCAAGCAATATATCAAA 730882144 181188 NM_031433.3(MFRP):c.1549C>T (p.Arg517Trp) MFRP Feb 27, 2015 MedGen:C1970236,OMIM:611040,Orphanet:ORPHA251279 Microphthalmia, isolated 5 germline 11 119341739 CTGACAAGCCTGCCCTGCTACCAGCATTTCCGGAGGCTCCTGTGTGGGCTGCTTGTGCCCC 121918172 15932 NM_000181.3(GUSB):c.1856C>T (p.Ala619Val) GUSB Jan 01, 1991 MedGen:C0085132,OMIM:253220,Orphanet:ORPHA584 Mucopolysaccharidosis type VII germline 7 65960997 TCACTCGGCAGAGACAACCAAAAAGTGCAGCGTTCCTTTTGCGAGAGAGATACTGGAAGAT 281864783 49810 NM_212472.2(PRKAR1A):c.286C>T (p.Arg96Ter) PRKAR1A Mar 14, 2016 MedGen:C2607929,OMIM:160980 Carney complex, type 1 germline 17 68522864 CCACCCAACCCAGTGGTTAAAGGTAGGAGGCGACGAGGTGCTATCAGCGCTGAGGTCTACA 121908867 21479 NM_000369.2(TSHR):c.970C>T (p.Gln324Ter) TSHR Dec 01, 1996 MedGen:C3493776,OMIM:275200 Hypothyroidism, congenital, nongoitrous, 1 germline 14 81143028 TCTGTGAATGCCTTGAATAGCCCCCTCCACCAGGAATATGAAGAGAATCTGGGTGACAGCA 137854450 31784 NM_001972.3(ELANE):c.377C>T (p.Ser126Leu) ELANE Dec 21, 2016 MedGen:C1859966,OMIM:202700;MedGen:CN169374 Severe congenital neutropenia autosomal dominant;not specified germline 19 855574 ATCTGTCCCCACCGCCACAGCTCAACGGGTCGGCCACCATCAACGCCAACGTGCAGGTGGC 879255114 246474 NM_000527.4(LDLR):c.2032C>T (p.Gln678Ter) LDLR Mar 25, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11120414 GAGAGGACCACCCTGAGCAATGGCGGCTGCCAGTATCTGTGCCTCCCTGCCCCGCAGATCA 730880082 178554 NM_004415.3(DSP):c.2821C>T (p.Arg941Ter) DSP Jan 17, 2017 MedGen:C0349788,Orphanet:ORPHA247,SNOMED CT:253528005,SNOMED CT:281170005;MedGen:CN221565;Human Phenotype Ontology:HP:0001695,MedGen:C0018790;MedGen:CN517202 Arrhythmogenic right ventricular cardiomyopathy;Arrhythmogenic right ventricular dysplasia/cardiomyopathy;Cardiac arrest;not provided germline 6 7576986 TAGAACTTGCACAGTGAAATATCTGGCAAACGAGACAAATCAGAGGAAGTACAAAAAATTG 587777425 137087 NM_015726.3(DCAF8):c.949C>T (p.Arg317Cys) DCAF8 Mar 11, 2014 MedGen:C1864695,OMIM:610100 Giant axonal neuropathy 2, autosomal dominant germline 1 160237145 GTTGTTTTCACCATTGACCTGAGACAAGACCGCCCAGCGTCGTAAGTGTAGCAGTAATATC 869025591 224824 NM_001039590.2(USP9X):c.3763C>T (p.Gln1255Ter) USP9X Mar 01, 2016 MedGen:C4225416,OMIM:300968 Mental retardation, X-linked 99, syndromic, female-restricted germline X 41188070 ATTATCTGGGCATCAGGATGTGGGTCGTTACAGCTAGTATTTAGCCCAAATGAAGAAATCA 104894625 23484 NM_000304.3(PMP22):c.65C>T (p.Ser22Phe) PMP22 Oct 18, 2012 MedGen:C0270911,OMIM:118220,Orphanet:ORPHA101081,SNOMED CT:40632002;MedGen:C0393814,OMIM:162500,Orphanet:ORPHA640,SNOMED CT:230558006 Charcot-Marie-Tooth disease, type IA;Hereditary liability to pressure palsies germline 17 15260663 ACGTCGCGGTGCTGGTGCTGCTGTTCGTCTCCACGATCGTCAGCGTGAGTGCCTGGCGGGG 368166217 98431 NM_000155.3(GALT):c.772C>T (p.Arg258Cys) GALT Mar 15, 2016 MedGen:C0268151,OMIM:230400,Orphanet:ORPHA79239,SNOMED CT:124354006;MedGen:CN517202 Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase;not provided germline 9 34648846 ACATGGCCCTACCAGACACTGCTGCTGCCCCGTCGGCATGTGCGGCGGCTACCTGAGCTGA 532480170 132874 NM_000051.3(ATM):c.6100C>T (p.Arg2034Ter) ATM Jul 14, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Ataxia-telangiectasia syndrome;Hereditary cancer-predisposing syndrome;not provided germline 11 108316015 GCTATTTTCACAATCTTTTCTTATAGACTACGAACATATGAACACGAAGCAATGTGGGGCA 1051597475 480599 NM_015312.3(KIAA1109):c.2902C>T (p.Arg968Cys) KIAA1109 Jan 11, 2018 MedGen:CN737163,OMIM:617822 ALKURAYA-KUCINSKAS SYNDROME germline 4 122226815 TCAGTTATAATATGTCAGCATGGAATTGATCGTCGGTTCTGTGAATCCAAGGTATATTAAC 104893741 19892 NM_023067.3(FOXL2):c.655C>T (p.Gln219Ter) FOXL2 Nov 03, 2016 MedGen:C0220663,OMIM:110100,Orphanet:ORPHA126;MedGen:C2931135 Blepharophimosis, ptosis, and epicanthus inversus;Blepharophimosis, ptosis, and epicanthus inversus syndrome type 1 germline 3 138946068 CCTCCCTCACCCATGCCCTATGCCTCCTGCCAGATGGCGGCAGCCGCAGCGGCTGCAGCAG 1057519374 226667 NM_152754.2(SEMA3D):c.1738C>T (p.Pro580Ser) SEMA3D Mar 01, 2016 Human Phenotype Ontology:HP:0000408,MedGen:C1843156 Progressive sensorineural hearing impairment inherited 7 85012812 GCTAGACGCCAAGATGTAAAATATGGCGACCCAATCACCCAGTGCTGGGACATCGAAGACA 28935489 25776 NM_000169.2(GLA):c.890C>T (p.Ser297Phe) GLA Dec 01, 1993 Human Phenotype Ontology:HP:0001071,MedGen:C0002986,OMIM:301500,Orphanet:ORPHA324,SNOMED CT:16652001 Fabry disease germline X 101398479 GGGCTATCATGGCTGCTCCTTTATTCATGTCTAATGACCTCCGACACATCAGCCCTCAAGC 121909731 31161 NM_005271.4(GLUD1):c.1493C>T (p.Ser498Leu) GLUD1 Aug 14, 2014 MedGen:C1847555,OMIM:606762,Orphanet:ORPHA35878;MedGen:CN517202 Hyperinsulinism-hyperammonemia syndrome;not provided germline 10 87057692 TACCCACGGCAGAGTTCCAAGACAGGATATCGGTGAGTGTGGTGACCCCACAGTTGTACTT 121908475 20848 NM_139025.4(ADAMTS13):c.2074C>T (p.Arg692Cys) ADAMTS13 Oct 04, 2001 MedGen:C1268935,OMIM:274150,Orphanet:ORPHA93583,SNOMED CT:373420004 Upshaw-Schulman syndrome germline 9 133442504 CCACGGCAGGCCTGGGTGTGGGCCGCTGTGCGTGGGCCCTGCTCGGTGAGCTGTGGGGCAG 745930390 247637 NM_001193464.1(DYNC2LI1):c.622C>T (p.Arg208Ter) DYNC2LI1 Aug 24, 2016 MedGen:C4310724,OMIM:617088 Short-rib thoracic dysplasia 15 with polydactyly germline 2 43796760 GAGAAGAGAAAGGTAATATGCAAGACACTTCGATTTGTTGCACATTATTATGGAGCATCAT 104894085 24026 NM_000349.2(STAR):c.772C>T (p.Gln258Ter) STAR Mar 18, 2016 MedGen:C0342474,OMIM:201710,Orphanet:ORPHA90790,SNOMED CT:44231009 Cholesterol monooxygenase (side-chain cleaving) deficiency germline 8 38144359 CAGGGGTGGCTGCCCAAGAGCATCATCAACCAGGTCCTGTCCCAGACCCAGGTGGATTTTG 876660485 233978 NM_000051.3(ATM):c.1396C>T (p.Gln466Ter) ATM Jun 28, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Ataxia-telangiectasia syndrome;Hereditary cancer-predisposing syndrome;not provided germline 11 108250861 TTACGATGCCTTACGGAAGTTGCATTGTGTCAAGACAAGAGGTCAAACCTAGAAAGCTCAC 137853211 32852 NM_001082971.1(DDC):c.272C>T (p.Ala91Val) DDC Jun 06, 2012 MedGen:C1291564,OMIM:608643,Orphanet:ORPHA35708,SNOMED CT:124600004 Deficiency of aromatic-L-amino-acid decarboxylase germline 7 50539958 CCACTGCCAGCTCGTACCCGGCCATGCTTGCGGACATGCTGTGCGGGGCCATTGGCTGCAT -1 481874 NM_002778.3(PSAP):c.607C>T (p.Gln203Ter) PSAP Nov 16, 2017 MedGen:CN517202 not provided germline 10 71828127 GATAATGGGGACGTTTGCCAGGACTGCATTCAGATGGTGACTGACATCCAGACTGCTGTAC 200960659 358254 NM_000153.3(GALC):c.1586C>T (p.Thr529Met) GALC Jan 18, 2016 MedGen:C0023521,OMIM:245200,Orphanet:ORPHA487,SNOMED CT:192782005 Galactosylceramide beta-galactosidase deficiency germline;unknown 14 87945637 ATATTGAAGACCCTGGCGAGCATCACTTCACGCTACGCCAAGTTCTCAACCAGAGACCCAT 758886532 359437 NM_000094.3(COL7A1):c.5499C>T (p.Gly1833=) COL7A1 Jun 27, 2016 MedGen:CN517202 not provided germline 3 48578354 CAGTGATCTGTTCCCACAGGGAAAGCCAGGCGAGGATGGCAAACCTGGCCTGAATGGAAAA 267606541 49589 NM_003977.3(AIP):c.241C>T (p.Arg81Ter) AIP Jun 21, 2012 MedGen:C0346302,OMIM:102200,Orphanet:ORPHA96256,SNOMED CT:254957009 Somatotroph adenoma not provided 11 67487147 CCTGTGTGGGAGACCATCGTGTGCACCATGCGAGAAGGGGAGATTGCCCAGTTCCTCTGTG 778961637 375017 NM_003632.2(CNTNAP1):c.1282C>T (p.Arg428Ter) CNTNAP1 May 16, 2017 MedGen:CN517202 not provided germline 17 42687957 CAGGTCAACGTGTCCATCGCGCAGAGCGGCCGAAAGAAGCTTCAGTTCGCTGCTGGTGAGG 775690041 211261 NM_006567.4(FARS2):c.1255C>T (p.Arg419Cys) FARS2 Jan 30, 2018 MedGen:C4310750,OMIM:617046,Orphanet:ORPHA466722;MedGen:CN517202 Spastic paraplegia 77, autosomal recessive;not provided germline 6 5771328 AAGACCAGCCACTGCTACCGCATCACGTACCGCCACATGGAACGGACTCTGTCCCAGAGAG 752334462 358593 NM_000159.3(GCDH):c.382C>T (p.Arg128Ter) GCDH Apr 26, 2017 MedGen:C0268595,OMIM:231670,Orphanet:ORPHA25,SNOMED CT:360416003,SNOMED CT:76175005 Glutaric aciduria, type 1 germline;unknown 19 12893530 GTTTCGTCTGTGGCCTATGGGCTCCTGGCCCGAGAGCTGGAGCGGGTGGACAGTGGCTACA 121918427 29057 NM_006179.4(NTF4):c.616C>T (p.Arg206Trp) NTF4 Mar 12, 2010 MedGen:C2751294,OMIM:613100 Glaucoma 1, open angle, O germline 19 49061382 GACACTGCCTGCGTCTGCACACTCCTCAGCCGGACTGGCCGGGCCTGAGACCCATGCCCAG 67156896 103220 NM_000531.5(OTC):c.791C>T (p.Thr264Ile) OTC - MedGen:CN517202 not provided unknown X 38408949 CGCATGGAGGCAATGTATTAATTACAGACACTTGGATAAGCATGGGACAAGAAGAGGAGAA 587777772 166025 NM_001287341.1(NADK2):c.595C>T (p.Arg199Ter) NADK2 Sep 15, 2014 MedGen:C1857252,OMIM:616034,Orphanet:ORPHA431361 2,4-Dienoyl-CoA reductase deficiency germline 5 36200275 TTTTCCCCCTTTCCTTTTTCAACAGCAAAACGACAAGGAAATTTGAGTCTTCCATTGAACA 786204856 187345 NM_000314.6(PTEN):c.284C>T (p.Pro95Leu) PTEN Mar 01, 2017 MedGen:C1959582,OMIM:601728,Orphanet:ORPHA306498 PTEN hamartoma tumor syndrome unknown 10 87933043 TTGCACAATATCCTTTTGAAGACCATAACCCACCACAGCTAGAACTTATCAAACCCTTTTG 760715690 268749 NM_182961.3(SYNE1):c.24577C>T (p.Arg8193Ter) SYNE1 Nov 10, 2015 MedGen:C1853116,OMIM:610743,Orphanet:ORPHA88644 Spinocerebellar ataxia, autosomal recessive 8 germline 6 152149542 GCGATCATCGAGGAGGAACTAGATGAGCTCCGACGGTACTGCCAGGAGGTCTTCGGGCGTG 116647652 214283 NM_153704.5(TMEM67):c.1351C>T (p.Arg451Ter) TMEM67 Feb 23, 2015 MedGen:C1853153,OMIM:610688 Joubert syndrome 6 unknown 8 93786285 CGCATTTTCTTAGTGGATGCAGTAAGTGGACGAGAAAATGACTTAGGAACTCAGCCAAGAG 1131690863 420530 NM_000321.2(RB1):c.751C>T (p.Arg251Ter) RB1 Apr 21, 2017 MedGen:C0027672,SNOMED CT:699346009;Human Phenotype Ontology:HP:0009919,MeSH:D012175,MedGen:C0035335,OMIM:180200,Orphanet:ORPHA790 Hereditary cancer-predisposing syndrome;Retinoblastoma germline 13 48362847 ACAGCTGTTATACCCATTAATGGTTCACCTCGAACACCCAGGCGAGGTCAGAACAGGAGTG 886042351 266470 NM_004006.2(DMD):c.2512C>T (p.Gln838Ter) DMD Aug 24, 2015 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Becker muscular dystrophy;Duchenne muscular dystrophy germline X 32491387 TATCAGAACAACATCATCGCTTTCTATAATCAGCTACAACAATTGGAGCAGATGACAACTA 199840952 224665 NM_001079.3(ZAP70):c.574C>T (p.Arg192Trp) ZAP70 Jul 07, 2016 MedGen:C4310768,OMIM:617006;Human Phenotype Ontology:HP:0005387,MedGen:C0494261 Autoimmune disease, multisystem, infantile-onset, 2;Combined immunodeficiency germline;maternal;unknown 2 97732893 CCCCTCCCTTCCCCTGCCAGGCTGAGGCCGCGGAAGGAGCAGGGCACATACGCCCTGTCCC 1064794066 404922 NM_020699.3(GATAD2B):c.973C>T (p.Gln325Ter) GATAD2B Sep 12, 2015 MedGen:CN517202 not provided germline 1 153816516 GCCATCTATATGAACCTTGCTTCTCATATCCAGCCAGGGACGGTGAACAGAGTGTCCTCGC 397514560 48268 NM_000314.6(PTEN):c.392C>T (p.Thr131Ile) PTEN Mar 01, 2013 MedGen:C1854416,OMIM:605309,Orphanet:ORPHA210548 Macrocephaly/autism syndrome germline 10 87933151 CAATTCACTGTAAAGCTGGAAAGGGACGAACTGGTGTAATGATATGTGCATATTTATTACA 587783189 167594 NM_139058.2(ARX):c.1414C>T (p.Arg472Ter) ARX Feb 08, 2013 MedGen:C1846171,OMIM:300215,Orphanet:ORPHA452 Lissencephaly 2, X-linked germline X 25007145 CTGAGCACTTTCCTCGGAGCGGCAGTGTTCCGACACCCAGCTTTCATCAGCCCGGCATTCG 387907142 40170 NM_020732.3(ARID1B):c.1903C>T (p.Gln635Ter) ARID1B Mar 18, 2012 MedGen:CN029606,OMIM:135900 Coffin-Siris syndrome 1 germline 6 156901502 CCCCAGGCGCAGTATCTGCCGTCCCAGTCCCAGCAGAGGTACCAGCCGCAGCAGGTGAGCA 869025205 214074 NM_024649.4(BBS1):c.1012C>T (p.Gln338Ter) BBS1 Oct 05, 2015 MedGen:C0752166,OMIM:209900,Orphanet:ORPHA110,SNOMED CT:5619004 Bardet-Biedl syndrome inherited 11 66523784 GCAGCCATCCTGACCATGAACCTCCTGGAGCAGCATTCCCGGGGCCTGCAGGCCGTCATGG 750078356 446411 NM_001039141.2(TRIOBP):c.1195C>T (p.Arg399Ter) TRIOBP Jul 25, 2017 MedGen:CN517202 not provided germline 22 37723751 AGAGCCTCCTCTCCCAACAGAACCACTCAACGAGAGAATTCCAGAACATCCTGTGCCCAGC 142968179 45794 NM_022787.3(NMNAT1):c.619C>T (p.Arg207Trp) NMNAT1 Sep 01, 2012 MedGen:C1837873,OMIM:608553 Leber congenital amaurosis 9 germline 1 9982480 ATCTATGAATCGGATGTGCTGTGGAAACACCGGAGCAACATTCACGTGGTGAATGAATGGA -1 444732 NM_001197104.1(KMT2A):c.6487C>T (p.Arg2163Ter) KMT2A Jun 27, 2017 MedGen:CN517202 not provided germline 11 118501839 TATTCTCCAACACAGAGATCCCCTGGCTGTCGACCGTTGCCTTCTGCAGGTAAAAGACTTT 398123497 99259 NM_000709.3(BCKDHA):c.288+9C>T BCKDHA Sep 03, 2013 MedGen:C0024776,OMIM:248600,SNOMED CT:27718001 Maple syrup urine disease germline 19 41410825 CAACCCCAGCGAGGACCCCCACGTGAGAGGCGGCCTCCCCCACTTCCCGTGCCCCCCACGC 199469638 39476 NM_017415.2(KLHL3):c.718C>T (p.Arg240Ter) KLHL3 Jan 22, 2012 MedGen:C3469605,OMIM:614495,Orphanet:ORPHA300525;Gene:7830,MedGen:C1449844,OMIM:145260,Orphanet:ORPHA757,SNOMED CT:15689008 Pseudohypoaldosteronism type 2D;Pseudohypoaldosteronism, type 2 germline 5 137661950 GAGCACATGGCAAAGCTGATGGAACATGTCCGACTTCCTCTCTTACCTAGGGACTACCTAG 62644473 15674 NM_000277.2(PAH):c.1220C>T (p.Pro407Leu) PAH Jan 01, 1999 MedGen:C0031485,OMIM:261600,Orphanet:ORPHA716,SNOMED CT:154735006;MedGen:CN517202 Phenylketonuria;not provided germline 12 102840495 TTGGTCTTAGGAACTTTGCTGCCACAATACCTCGGCCCTTCTCAGTTCGCTACGACCCATA 387907106 40054 NM_014797.2(ZBTB24):c.1369C>T (p.Arg457Ter) ZBTB24 Jun 10, 2011 MedGen:C3279748,OMIM:614069 Immunodeficiency-centromeric instability-facial anomalies syndrome 2 germline 6 109467654 AGTTCTCTTCAGACCCACATCAGAATCCATCGGTAAAGTTTTGCAGATATTTTTCTCGCAT 63751321 94759 NM_000179.2(MSH6):c.2503C>T (p.Gln835Ter) MSH6 Mar 15, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Lynch syndrome;not provided germline 2 47800486 ATTCATAATGTTGGGTCTCCCCTGAAGAGTCAGAACCACCCAGACAGCAGGGCTATAATGT 587779872 132916 NM_000051.3(ATM):c.8494C>T (p.Arg2832Cys) ATM Aug 18, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Ataxia-telangiectasia syndrome;Hereditary cancer-predisposing syndrome;not provided germline;unknown 11 108345818 GATGTTTGCCAAAATTTTCAACCAGTTTTCCGTTACTTCTGCATGGAAAAATTCTTGGATC 386834093 71431 NM_017890.4(VPS13B):c.5086C>T (p.Arg1696Ter) VPS13B Jul 25, 2017 MedGen:C0265223,OMIM:216550,Orphanet:ORPHA193,SNOMED CT:56604005;MedGen:CN517202 Cohen syndrome;not provided germline 8 99575719 TTGACCCCCGTTTTGACAGATTTTTCTGTCCGAATAACTGGAGCACCTGCTGTCATTTTCA 886041856 264585 NM_001197104.1(KMT2A):c.3301C>T (p.Arg1101Ter) KMT2A Jul 05, 2016 MedGen:CN228659;MedGen:CN517202 intellectual deficiency;not provided de novo;germline 11 118476949 CCCACCCTGAGTGCCTTACCATGGGAAGAACGAGAAAAGATTTTGTCTTCCATGGGGAATG 104895564 16635 NM_144687.3(NLRP12):c.850C>T (p.Arg284Ter) NLRP12 Feb 05, 2008 MedGen:C2673198,OMIM:611762,Orphanet:ORPHA247868;MedGen:CN517202 Familial cold autoinflammatory syndrome 2;not provided germline 19 53810809 GAGCCCAGCGCGCCTCTCCAGGAGCTCATCCGAGTTCCCGAGCGCCTCCTTTTCATCATCG 137852489 25085 NM_000194.2(HPRT1):c.325C>T (p.Gln109Ter) HPRT1 Jun 01, 1990 MedGen:C0023374,OMIM:300322,SNOMED CT:10406007 Lesch-Nyhan syndrome germline X 134486471 ATAGTTTTTTTTTTTTTTAACTAGAATGACCAGTCAACAGGGGACATAAAAGTAATTGGTG 753829320 247691 NM_001277061.1(MFF):c.892C>T (p.Arg298Ter) MFF Aug 25, 2016 MedGen:C4310726,OMIM:617086 Encephalopathy due to defective mitochondrial and peroxisomal fission 2 germline 2 227355756 CTGACTGTTGTAGATGCAGCTTCACTAAGACGACAGGTATTTAGTGTACCAAATAAGATAT 758677637 440081 NM_001199397.1(NEK1):c.1618C>T (p.Arg540Ter) NEK1 Jun 01, 2017 MedGen:C0024507,OMIM:263520,SNOMED CT:72922008 Short rib-polydactyly syndrome, Majewski type maternal 4 169537856 AGAGCTAAACAAGTAGAAGAGTTCCTGCAGCGAAAACGGGAAGCTATGCAGAATAAAGCTC 397515488 77880 NM_152732.4(RSPH9):c.52C>T (p.Gln18Ter) RSPH9 Sep 05, 2013 MedGen:C2675228,OMIM:612650 Ciliary dyskinesia, primary, 12 germline 6 43645150 CTGTCTCTGGAGCTGGCGTCCGGCAGTGGGCAGGGCCTCAGCCCGGACCGTCGGGCCTCGC 387907253 45613 NM_002501.3(NFIX):c.568C>T (p.Gln190Ter) NFIX Aug 13, 2010 MedGen:C3553660,OMIM:614753,Orphanet:ORPHA420179 Sotos syndrome 2 germline 19 13073055 TCCCCTTTTGTGTCTCCTGCAGAATCCGGACAATCAGATAGTTCAAACCAGCAAGGAGATG 199905054 263171 NM_138704.3(NSMCE3):c.790C>T (p.Leu264Phe) NSMCE3 Dec 19, 2016 MedGen:CN239026;MedGen:C4310653,OMIM:617241 Lung damage, immunodeficiency and chromosome breakage syndrome;Lung disease, immunodeficiency, and chromosome breakage syndrome germline;inherited;not applicable;unknown 15 29268916 ACCAACCTGGAAACCAGCAAGATGAAAGTTCTTAAGTTTGTGGCCAAGGTCCATAATCAAG 779445819 243890 NM_016239.3(MYO15A):c.6589C>T (p.Gln2197Ter) MYO15A Jun 06, 2016 MedGen:C1838263,OMIM:600316 Deafness, autosomal recessive 3 germline;inherited 17 18148108 CGCCTCATGCAGGCCATGGGCCGGGCCCAACAGCAGGGCTCGGGGGCTGCCCGCACCTTAC 121434459 22680 NM_000935.2(PLOD2):c.1823C>T (p.Thr608Ile) PLOD2 Oct 17, 2003 MedGen:C1836602,OMIM:609220 Bruck syndrome 2 germline 3 146071386 GTATATCTGGTGGTTATGAAAATGTCCCAACTGATGATATCCACATGAAGCAAGTTGATCT 190140598 196540 NM_001035.2(RYR2):c.1258C>T (p.Arg420Trp) RYR2 May 18, 2017 MedGen:C1832931,OMIM:600996;MedGen:C1631597,Orphanet:ORPHA3286;MedGen:C4053736,OMIM:604772;Human Phenotype Ontology:HP:0001663,MedGen:C1962976;MedGen:CN517202 Arrhythmogenic right ventricular dysplasia, familial, 2;Catecholaminergic polymorphic ventricular tachycardia;Catecholaminergic polymorphic ventricular tachycardia type 1;Ventricular fibrillation;not provided de novo;germline;unknown 1 237445488 CATGAAGAATCACGCACAGCCCGAGTTATCCGGAGCACAGTCTTCCTTTTCAATAGATTTA 373331232 431670 NM_001145849.1(PROM1):c.730C>T (p.Arg244Ter) PROM1 Jan 01, 2015 Human Phenotype Ontology:HP:0000556,MedGen:C0854723,Orphanet:ORPHA71862,SNOMED CT:314407005 Retinal dystrophy unknown 4 16023380 AATTCAGTGCTAGGAGGCGGAATTCTTGACCGACTGAGACCCAACATCATCCCTGTTCTTG 121909511 33383 NM_000080.3(CHRNE):c.865C>T (p.Leu289Phe) CHRNE Sep 01, 1996 Gene:8144,MedGen:C1853949,OMIM:605809 Myasthenic syndrome, congenital, 4a, slow-channel germline 17 4900845 GTCCTGCTCGCCCAGACCGTCTTCTTGTTCCTCATTGCCCAGAAAATCCCAGAGACTTCTC 121434383 17240 NM_018668.4(VPS33B):c.1594C>T (p.Arg532Ter) VPS33B Apr 01, 2004 MedGen:C1859722,OMIM:208085,Orphanet:ORPHA2697 Arthrogryposis renal dysfunction cholestasis syndrome germline 15 90999963 GTGCTTACACCTTCCCAGGTGCTAGAGCGGCGAAGCTGGCAGGGCCTTGATGAGGTGGTAC 1135401797 424656 NM_006624.5(ZMYND11):c.76C>T (p.Arg26Trp) ZMYND11 Jan 06, 2017 MedGen:C4015167,OMIM:616083 Mental retardation, autosomal dominant 30 de novo 10 180088 CAGCATCTTTGGGCAGCCATTGAGATTATACGGAACCAGAAGCAGATTGCCAACATTGACC 886039219 259244 NM_001204.6(BMPR2):c.16C>T (p.Gln6Ter) BMPR2 Jul 11, 2016 MedGen:C0152171,OMIM:178600,SNOMED CT:26174007 Primary pulmonary hypertension germline 2 202377490 TTGGCTGGCCCAGGGATGACTTCCTCGCTGCAGCGGCCCTGGCGGGTGCCCTGGCTACCAT 786203448 184516 NM_001042492.2(NF1):c.625C>T (p.Gln209Ter) NF1 Apr 01, 2015 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003 Hereditary cancer-predisposing syndrome;Neurofibromatosis, type 1 germline;inherited 17 31181460 TTTAAATTTAAAGCCCTAAAGAAGGTTGCGCAGTTAGCAGTTATAAATAGCCTGGAAAAGG 45586240 178436 NM_001001430.2(TNNT2):c.613C>T (p.Arg205Trp) TNNT2 Apr 29, 2014 EFO:EFO_0000407,Human Phenotype Ontology:HP:0001644,MedGen:C0007193,Orphanet:ORPHA217604,SNOMED CT:195021004;MedGen:CN517202 Primary dilated cardiomyopathy;not provided germline 1 201361989 GAGCGGAAAAGTGGGAAGAGGCAGACTGAGCGGGAAAAGAAGAAGAAGATTCTGGCTGAGA 776240891 452731 NM_004656.3(BAP1):c.757C>T (p.Gln253Ter) BAP1 Sep 18, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C3280492,OMIM:614327,Orphanet:ORPHA289539 Hereditary cancer-predisposing syndrome;Tumor susceptibility linked to germline BAP1 mutations germline 3 52406279 GCCAGGCTGCATGTGCTGAAGGTGAACCGTCAGACAGTACTAGAGGCTCTGCAGCAGGTAG 281865224 105592 NM_004183.3(BEST1):c.274C>T (p.Arg92Cys) BEST1 May 11, 2016 MedGen:CN517202 not provided germline 11 61955744 CCAGGCTTCTACGTGACGCTGGTCGTGACCCGCTGGTGGAACCAGTACGAGAACCTGCCGT 387907338 51098 NM_001885.2(CRYAB):c.166C>T (p.Arg56Trp) CRYAB Apr 18, 2013 MedGen:C3151065,OMIM:613763 Cataract 16, multiple types germline 11 111911559 CCCTTCTACCTTCGGCCACCCTCCTTCCTGCGGGCACCCAGCTGGTTTGACACTGGACTCT 769864196 440100 NM_147127.4(EVC2):c.1708C>T (p.Gln570Ter) EVC2 Jun 01, 2017 MedGen:CN239258;MedGen:C0024507,OMIM:263520,SNOMED CT:72922008;MedGen:C0432198,OMIM:269860,SNOMED CT:254052001 Ellis-van Creveld Syndrome;Short rib-polydactyly syndrome, Majewski type;Type IV short rib polydactyly syndrome maternal;unknown 4 5631795 AAAATGCTGCTGCAAAATTATTCTAAAATACAGGTAATACATCAGCCTCGCTGTGATGGAA 398123072 98169 NM_000016.5(ACADM):c.157C>T (p.Arg53Cys) ACADM Sep 23, 2016 MedGen:C0220710,OMIM:201450,Orphanet:ORPHA42,SNOMED CT:128596003;MedGen:CN517202 Medium-chain acyl-coenzyme A dehydrogenase deficiency;not provided germline;unknown 1 75732682 GAACAGCAGAAAGAATTTCAAGCTACTGCTCGTAAATTTGCCAGAGAGGAAATCATCCCAG 80359826 201142 NM_006516.2(SLC2A1):c.988C>T (p.Arg330Ter) SLC2A1 Dec 08, 2016 MedGen:C3149117;Human Phenotype Ontology:HP:0000252,MedGen:C0424688;MedGen:C0014544,Orphanet:ORPHA166463;MedGen:CN228659;MedGen:CN517202 GLUT1 deficiency syndrome 1, autosomal recessive;Microcephaly;Seizure Disorders;intellectual deficiency;not provided de novo;germline 1 42929018 TGTCTCTGCCCACAGCTGTTTGTGGTGGAGCGAGCAGGCCGGCGGACCCTGCACCTCATAG 886039274 259379 NM_001242896.1(DEPDC5):c.4606C>T (p.Gln1536Ter) DEPDC5 Apr 13, 2016 Gene:50987,MedGen:C1858477,OMIM:604364 Epilepsy, familial focal, with variable foci 1 germline 22 31906291 CGGCGGCGGAACTCCACCAGCTCCACCAACCAGAACATGTTCTGCGAGGAGCGGGTCGGCT 121912982 31904 NM_000031.5(ALAD):c.718C>T (p.Arg240Trp) ALAD May 01, 1992 MedGen:C0268328,OMIM:612740,Orphanet:ORPHA95157,SNOMED CT:64081000 Porphobilinogen synthase deficiency germline 9 113389521 CACCCACATTATACCCTCATCCCTTAGGACCGGGATGTACGGGAAGGAGCTGACATGCTCA 104893803 27857 NM_003106.3(SOX2):c.463C>T (p.Gln155Ter) SOX2 Oct 01, 2005 MedGen:C1859773,OMIM:206900,Orphanet:ORPHA77298 Microphthalmia syndromic 3 germline 3 181712823 GTGGGCGCCGGCCTGGGCGCGGGCGTGAACCAGCGCATGGACAGTTACGCGCACATGAACG 80338807 19947 NM_014646.2(LPIN2):c.2201C>T (p.Ser734Leu) LPIN2 Feb 19, 2013 MedGen:C1864997,OMIM:609628,Orphanet:ORPHA77297;MedGen:CN517202 Majeed syndrome;not provided germline 18 2922173 TCAGGAATGGCTACAAGTTTCTGTACTGCTCGGCTCGTGCCATCGGCATGGCCGACATGAC 74315513 23065 NM_003073.4(SMARCB1):c.34C>T (p.Gln12Ter) SMARCB1 Apr 01, 2007 MedGen:C4048809,OMIM:162091 Schwannomatosis 1 germline 22 23787203 ATGATGATGGCGCTGAGCAAGACCTTCGGGCAGAAGCCCGTGAAGTTCCAGCTGGAGGACG 200001068 384403 NM_000297.3(PKD2):c.916C>T (p.Arg306Ter) PKD2 Jul 12, 2016 MedGen:C2751306,OMIM:613095 Polycystic kidney disease 2 germline 4 88038323 CAGCCCAGCAACCAGACTGAAGCTGACAACCGAAGTTTCATCTTCTATGAGAACCTGCTGT 118204047 15804 NM_015702.2(MMADHC):c.160C>T (p.Arg54Ter) MMADHC Jan 07, 2016 MedGen:C1848552,OMIM:277410;MedGen:C1848554 Methylmalonic acidemia with homocystinuria cblD;Methylmalonic aciduria, cblD type, variant 2 germline 2 149579643 TGTTCCTTTTGTTGTTTCTCTTCAGGCTCTCGAACAGTGTGGCCTGATGAAACTATGGGAC 121918581 28145 NM_000283.3(PDE6B):c.1669C>T (p.His557Tyr) PDE6B Jun 01, 1993 Human Phenotype Ontology:HP:0000547,MeSH:D012174,MedGen:C0035334,OMIM:268000,Orphanet:ORPHA791,SNOMED CT:28835009;MedGen:C3151107,OMIM:613801 Retinitis pigmentosa;Retinitis pigmentosa 40 germline 4 662188 ATCAGCAAAGGGTACCGGAGAATCACCTACCACAACTGGCGCCACGGCTTCAACGTGGCCC 104894444 24327 NM_000161.2(GCH1):c.142C>T (p.Gln48Ter) GCH1 Jan 01, 2001 MedGen:C1851920,OMIM:128230,Orphanet:ORPHA255 Dystonia 5, Dopa-responsive type germline 14 54902522 AAGCCCCCGCGGCCCGAGGCCAAGAGCGCGCAGCCCGCGGACGGCTGGAAGGGCGAGCGGC 540839115 260388 NM_024818.4(UBA5):c.736C>T (p.Arg246Ter) UBA5 Nov 22, 2016 MedGen:C4310699,OMIM:617133 Spinocerebellar ataxia, autosomal recessive 24 germline 3 132672101 GCTGCAAATATTGATGAAAAGACTCTGAAACGAGAAGGTGTTTGTGCAGCCAGTCTTCCTA 587777572 150455 NM_012293.2(PXDN):c.2638C>T (p.Arg880Cys) PXDN Sep 09, 2011 MedGen:C3151617,OMIM:269400 Anterior segment dysgenesis 7 germline 2 1649142 AGGAGCGGGGCCCGCTGCATGTTCTTCGTGCGCTCCAGCCCTGTGTGCGGCAGCGGCATGA 1057520690 368511 NM_181523.2(PIK3R1):c.1042C>T (p.Arg348Ter) PIK3R1 May 04, 2015 MedGen:CN517202 not provided germline 5 68293123 CATTTCAGGGAAGAAGTGAATGAAAAACTTCGAGATACAGCAGACGGGACCTTTTTGGTAC 119458970 17633 NM_000126.3(ETFA):c.797C>T (p.Thr266Met) ETFA Nov 06, 2017 MedGen:C3278154;MedGen:C0268596,OMIM:231680,Orphanet:ORPHA26791,SNOMED CT:22886006;MedGen:CN517202 Glutaric acidemia IIA;Glutaric aciduria, type 2;not provided germline 15 76274431 TTGTTCCCAATGACATGCAAGTTGGACAGACGGGAAAAATAGTAGCACCAGTAAGTATTGC 121908576 21208 NM_004328.4(BCS1L):c.166C>T (p.Arg56Ter) BCS1L Feb 07, 2017 MedGen:CN239240;MedGen:C1864002,OMIM:603358,Orphanet:ORPHA53693;MedGen:C1852372,OMIM:124000;MedGen:CN517202 BCS1L-Related Disorders;GRACILE syndrome;Mitochondrial complex III deficiency;not provided germline;paternal;unknown 2 218661153 CATTACATGATCACACTGGAAGTCCCTGCTCGAGACAGGAGCTATGCCTGGTTGCTTAGCT 587777064 94232 NM_018051.4(WDR60):c.1891C>T (p.Gln631Ter) WDR60 Sep 05, 2013 MedGen:C3809691,OMIM:615503 Short-rib thoracic dysplasia 8 with or without polydactyly germline 7 158918839 AGGGCCCTGTATTTTAGTGACAGCTCATCTCAGCTGAACACCAGTCTACCATTCCTTCAAA 547709692 200117 NM_000255.3(MUT):c.890C>T (p.Thr297Ile) MUT Oct 04, 2012 MedGen:C1855114,OMIM:251000 Methylmalonic aciduria due to methylmalonyl-CoA mutase deficiency germline 6 49456101 ACTCTAGAACTGGACTCCAGGCTGGCCTGACAATTGATGAATTTGCACCAAGGTGAGTAAA 772038362 445947 NM_000227.4(LAMA3):c.4114C>T (p.Gln1372Ter) LAMA3 Jul 14, 2017 MedGen:CN517202 not provided germline 18 23939301 CAAGATGCTTGCTCACCACTTCCCAAGACCCAGGCCAATCATGGAGCCCTCCAGTTTGGGG 863223919 211430 NM_021830.4(TWNK):c.967C>T (p.Arg323Ter) TWNK Sep 26, 2017 MedGen:CN517202 not provided germline 10 100989177 CGGTCCTGGGAAGCCGCCAAGTTGTTTGCACGAAAACTGAACCCCAAACGATGCTTCTTGG 120074152 17862 NM_017890.4(VPS13B):c.2911C>T (p.Arg971Ter) VPS13B Jan 17, 2017 MedGen:C0265223,OMIM:216550,Orphanet:ORPHA193,SNOMED CT:56604005 Cohen syndrome germline;unknown 8 99384294 TATACGTGGCTCATCTATCAGCCTCAGAAACGAACAAGTAGACATATGCAACAGGTAAGAG 587777248 125920 NM_016373.3(WWOX):c.160C>T (p.Arg54Ter) WWOX Jan 23, 2014 MedGen:C4015519,OMIM:616211 Epileptic encephalopathy, early infantile, 28 germline 16 78108475 TGGGAACATCCAAAAACTGGAAAAAGAAAACGAGTGGCAGGAGGTTTGTATGTTGTTGTCT 199472763 67604 NM_000218.2(KCNQ1):c.1031C>T (p.Ala344Val) KCNQ1 Oct 30, 2017 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MedGen:CN517202 Congenital long QT syndrome;not provided germline 11 2583544 TCTTTGCCATCTCCTTCTTTGCGCTCCCAGCGGTAGGTGCCCCGTGGGTGCGTTTTCCCTG 119480073 19951 NM_145693.3(LPIN1):c.2401C>T (p.Arg801Ter) LPIN1 Oct 01, 2008 MedGen:C1849386,OMIM:268200 Myoglobinuria, acute recurrent, autosomal recessive germline 2 11819590 ACAGAACCCTTTTATGCTGCTTTTGGAAACCGACCAGCTGTAAGTAGTAGATTGGGTATAG 121908640 21367 NM_000050.4(ASS1):c.1087C>T (p.Arg363Trp) ASS1 Oct 31, 2017 MedGen:C0175683,OMIM:215700,Orphanet:ORPHA187;MedGen:CN517202;MedGen:CN169374 Citrullinemia type I;not provided;not specified germline;unknown 9 130494983 GTCCTCAAGGGCCAGGTGTACATCCTCGGCCGGGAGTCCCCACTGTCTCTCTACAATGAGG 886040218 261660 NM_007294.3(BRCA1):c.4225C>T (p.Gln1409Ter) BRCA1 Sep 18, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome germline 17 43082536 ACCATGCAACATAACCTGATAAAGCTCCAGCAGGAAATGGCTGAACTAGAAGCTGTGTTAG 180177365 78980 NM_017890.4(VPS13B):c.5920C>T (p.Arg1974Ter) VPS13B May 06, 2016 MedGen:CN517202 not provided germline 8 99642435 TTGCTTCTGAGTTGTCACCACAGAAAGCAGCGAGTGGAAGTATCCATTTTTGATGCTGTGC 121434571 31606 NM_000123.3(ERCC5):c.2375C>T (p.Ala792Val) ERCC5 Apr 27, 2007 MedGen:C0268141,OMIM:278780,SNOMED CT:36454001 Xeroderma pigmentosum, group G germline 13 102866687 CCTACATCCAGGCTCCCATGGAAGCAGAGGCGCAGTGCGCCATCCTGGACCTGACTGATCA 63750135 426781 NM_001171.5(ABCC6):c.4448C>T (p.Pro1483Leu) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16150197 ACAAGGGGCAGGTGGCAGAGAGCGGCAGCCCGGCCCAGCTGCTGGCCCAGAAGGGCCTGTT -1 466481 NM_024589.2(ROGDI):c.340C>T (p.Gln114Ter) ROGDI May 01, 2017 MedGen:C0406740,OMIM:226750,SNOMED CT:109478007 Kohlschutter's syndrome germline 16 4799778 ACCCCTCTGGATGACCCCTGCTTCCAGATCCAGGATGCCAGAAACCATGTGAGCCAAGCCA 121434612 26608 NM_002578.4(PAK3):c.199C>T (p.Arg67Cys) PAK3 Aug 14, 2000 MedGen:C0796237,OMIM:300558 Mental retardation 30, X-linked germline X 111142119 CCTTTAGCCAATAAGAAGAAGGAGAAAGAGCGCCCAGAGATCTCTCTTCCTTCAGACTTTG 201179294 380151 NM_003630.2(PEX3):c.898C>T (p.Arg300Ter) PEX3 Jul 20, 2017 MedGen:CN240842,OMIM:617370 Peroxisome biogenesis disorder 10b germline 6 143479155 AGACTTCTAGACAATATGGCTGAGTTCTTTCGACCTACTGAACAGGACCTGCAACATGGTA 128625229 26250 NM_004006.2(DMD):c.8944C>T (p.Arg2982Ter) DMD Apr 12, 2016 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009;MedGen:C3668940,OMIM:302045;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Becker muscular dystrophy;Dilated cardiomyopathy 3B;Duchenne muscular dystrophy germline X 31444621 TTTGCTTTTGACTATTGCACACAGGCACTTCGAGGAGAAATTGCGCCTCTGAAAGAGAACG 587777512 143244 NM_006439.4(MAB21L2):c.151C>T (p.Arg51Cys) MAB21L2 Jun 05, 2015 MedGen:C4014540,OMIM:615877,Orphanet:ORPHA424099 Microphthalmia/coloboma and skeletal dysplasia syndrome de novo;germline 4 150583180 GTGCTCAAGGAAGTGGAGGTGCAGGAGCCTCGCTTCATCAGCTCCTTGAGCGAGATCGATG 267606732 21090 NM_004273.4(CHST3):c.988C>T (p.Gln330Ter) CHST3 Oct 01, 2010 MedGen:C1840471,OMIM:143095 Spondyloepiphyseal dysplasia with congenital joint dislocations germline 10 72008019 ACCTGGAAGAAGTGGCTGGACGACGAGGGCCAGGACGGCCTGAGGGAAGAGGAGGTGCAGC 794727977 196319 NM_020732.3(ARID1B):c.2692C>T (p.Arg898Ter) ARID1B Feb 16, 2017 MedGen:C3281201,OMIM:614562;MedGen:CN517202 Mental retardation, autosomal dominant 12;not provided germline 6 157148764 AGCCAGCCATGTGGTGCTGTGCCCCTGGGACGAATGCCATCAGCTGGGATGCAGAACAGAC 398123009 48180 NM_018026.3(PACS1):c.607C>T (p.Arg203Trp) PACS1 Aug 07, 2017 MeSH:D030342,MedGen:C0950123;MedGen:C0000772,SNOMED CT:116022009,SNOMED CT:444406006;MedGen:C3554343,OMIM:615009,Orphanet:ORPHA329224;MedGen:CN517202 Inborn genetic diseases;Multiple congenital anomalies;Schuurs-hoeijmakers syndrome;not provided de novo;germline;unknown 11 66211206 ATGCTGCAAAGGAGAAAACGTTACAAGAATCGGACCATCTTGGGCTATAAGACCTTGGCCG 587777742 166021 NM_201590.2(CACNB2):c.32C>T (p.Thr11Ile) CACNB2 May 01, 2009 MedGen:C2678477,OMIM:611876 Brugada syndrome 4 germline 10 18340958 TGCTTGACAGACGCCTTATAGCTCCTCAAACTAAATACATTATTCCTGGGGTAAGCATACG 775720394 457024 NM_001277115.1(DNAH11):c.13069C>T (p.Arg4357Ter) DNAH11 Mar 09, 2017 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244 Ciliary dyskinesia germline 7 21899355 CCATAAACCAGGTTCAATGACCTCCTCCTGCGATGCCGAGAACTCGATACTTGGACACAAG 886039513 260022 NM_006009.3(TUBA1A):c.367C>T (p.Arg123Cys) TUBA1A Feb 26, 2017 MedGen:CN517202 not provided germline 12 49186318 GAGATCATTGACCTCGTGTTGGACCGAATTCGCAAGCTGGTATGTTTCTTTTCAAGAATAA 66913554 426807 NM_001171.5(ABCC6):c.4192C>T (p.Arg1398Ter) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16154644 CCCGGCCAGCTGCAGTACAAGTGTGCTGACCGAGGCGAGGACCTGAGGTATGGTCGTCCCA 74315294 23992 NM_000098.2(CPT2):c.338C>T (p.Ser113Leu) CPT2 Jul 07, 2017 MedGen:C0342790,Orphanet:ORPHA157,SNOMED CT:238002005;MedGen:C1833511,OMIM:600649,Orphanet:ORPHA228305;MedGen:C1833511,OMIM:600649,Orphanet:ORPHA228305;MedGen:C1833518,OMIM:608836,Orphanet:ORPHA228308;MedGen:C1833518,OMIM:608836,Orphanet:ORPHA228308;MedGen:C1833508,OMIM:255110,Orphanet:ORPHA228302;MedGen:C1833508,OMIM:255110,Orphanet:ORPHA228302;MedGen:C3280160,OMIM:614212,Orphanet:ORPHA263524;MedGen:CN517202 Carnitine palmitoyltransferase II deficiency;Carnitine palmitoyltransferase II deficiency, infantile;Carnitine palmitoyltransferase II deficiency, infantile;Carnitine palmitoyltransferase II deficiency, lethal neonatal;Carnitine palmitoyltransferase II deficiency, lethal neonatal;Carnitine palmitoyltransferase II deficiency, myopathic, stress-induced;Carnitine palmitoyltransferase II deficiency, myopathic, stress-induced;Encephalopathy, acute, infection-induced, 4, susceptibility to;not provided germline;unknown 1 53202427 ACAAACAGAATAAACATACAAGCTACATTTCGGGTAGGTAGGCTGGGCTGTGGGTATGATT 138607170 80741 NM_001349253.1(SCN11A):c.673C>T (p.Arg225Cys) SCN11A Nov 07, 2013 MedGen:C3809899,OMIM:615552,Orphanet:ORPHA391392 Episodic pain syndrome, familial, 3 germline 3 38925454 ACCATCAAACTATTGCCCCTGCGTACCTTCCGTGTGTTCAGAGCTTTGAAAGCAATTTCAG 761357250 204434 NM_007348.3(ATF6):c.970C>T (p.Arg324Cys) ATF6 Oct 29, 2015 MedGen:C4225297,OMIM:616517 Achromatopsia 7 germline 1 161819693 ATAAAAAATCGAGAATCCGCTTGTCAGTCTCGCAAGAAGAAGAAAGAATATATGCTAGGGT 142859678 108188 NM_003784.3(SERPINB7):c.796C>T (p.Arg266Ter) SERPINB7 Aug 17, 2015 MedGen:C3810072,OMIM:615598,Orphanet:ORPHA140966;MedGen:CN517202 Palmoplantar keratoderma, nagashima type;not provided germline 18 63804288 CAGAATCTAATGGAATGGACCAATCCAAGGCGAATGACCTCTAAGTATGTTGAGGTATTTT 80338835 29111 NM_002473.5(MYH9):c.5797C>T (p.Arg1933Ter) MYH9 Apr 05, 2011 MedGen:C0403445,OMIM:153640,SNOMED CT:236422008;MedGen:CN073381,Orphanet:ORPHA182050;MedGen:C0340978,OMIM:155100;MedGen:C1854520,OMIM:605249 Fechtner syndrome;MYH9 related disorders;May-Hegglin anomaly;Sebastian syndrome germline 22 36282754 CGCGGGGACCTGCCGTTTGTCGTGCCCCGCCGAATGGCCCGGAAAGGCGCCGGGGATGGCT 121912847 32493 NM_000094.3(COL7A1):c.4888C>T (p.Arg1630Ter) COL7A1 Mar 10, 2016 MedGen:C1853063;MedGen:CN517202 Epidermolysis bullosa pruriginosa, autosomal recessive;not provided germline 3 48581271 CGGCCTGGCCCCCCAGGACCTGTTGGCCCCCGAGGACGAGATGTAAGAGGCTGGAGTCGGG 773279269 485710 NM_000233.3(LHCGR):c.370C>T (p.Arg124Ter) LHCGR Jan 02, 2018 MedGen:C0266432,OMIM:238320,SNOMED CT:56212008 Leydig cell agenesis germline 2 48725689 ATTGAGCCCGGAGCATTTATAAATCTTCCCCGATTAAAATACTTGTGAGAAATTTTCCTTT 111316898 265097 NM_015338.5(ASXL1):c.1867C>T (p.Gln623Ter) ASXL1 Jan 06, 2016 MedGen:CN517202 not provided germline 20 32434579 ACCCTCGCAGACATTAAAGCCCGTGCTCTGCAGGTCCGAGGGGCGAGAGGTCACCACTGCC 727504031 177444 NM_000266.3(NDP):c.220C>T (p.Arg74Cys) NDP Nov 12, 2015 MedGen:C0266526,OMIM:310600,SNOMED CT:15228007;MedGen:C1844579,OMIM:305390 Atrophia bulborum hereditaria;Familial exudative vitreoretinopathy, X-linked germline;maternal X 43949981 AGGTGCGAGGGGCACTGCAGCCAGGCGTCACGCTCCGAGCCTTTGGTGTCGTTCAGCACTG 912001256 446892 NM_000334.4(SCN4A):c.3424C>T (p.Arg1142Ter) SCN4A Aug 12, 2016 Human Phenotype Ontology:HP:0003198,MedGen:C0026848 Myopathy maternal 17 63947062 CGGGCCCTGCGTCCCCTGAGGGCACTGTCCCGATTCGAGGGCATGAGGGTGGGTGCTGAAG 387906600 38578 NM_001822.5(CHN1):c.754C>T (p.Pro252Ser) CHN1 May 01, 2011 MedGen:C0751083,OMIM:604356 Duane syndrome type 2 germline 2 174812441 AATGTTCATAAGCAGTGTTCCAAGATGGTCCCAAATGACTGTAAGCCAGACTTGAAGCATG 398123249 98526 NM_000202.7(IDS):c.262C>T (p.Arg88Cys) IDS Aug 14, 2017 MedGen:C0026705,OMIM:309900,SNOMED CT:70737009 Mucopolysaccharidosis, MPS-II germline X 149503468 CCCTAACAGCAAGCAGTGTGCGCCCCGAGCCGCGTTTCTTTCCTCACTGGCAGGAGACCTG 369721476 153787 NM_001288767.1(ARMC5):c.1084C>T (p.Arg362Ter) ARMC5 Jun 06, 2014 MedGen:C4014803,OMIM:615954 Acth-independent macronodular adrenal hyperplasia 2 unknown 16 31462346 GCCCTCGTCCGTGCCCTCCTGGAACTCAGCCGAGGCTGCTCCCGGGCCTGTGCTGAGCAGC 751710854 186900 NM_000053.3(ATP7B):c.2383C>T (p.Leu795Phe) ATP7B Jun 07, 2016 MedGen:C0019202,OMIM:277900,Orphanet:ORPHA905,SNOMED CT:88518009 Wilson disease germline;unknown 13 51957580 TAGAGCAAAACCTCAGAAGCCCTGGCTAAACTCATGTCTCTCCAAGCCACAGAAGCCACCG 28939681 22521 NM_001540.4(HSPB1):c.406C>T (p.Arg136Trp) HSPB1 Jun 01, 2004 MedGen:C1847823,OMIM:606595,Orphanet:ORPHA99940 Charcot-Marie-Tooth disease type 2F germline 7 76303843 GAGCGGCAGGACGAGCATGGCTACATCTCCCGGTGCTTCACGCGGAAATACACGTGAGTCC 28934907 26853 NM_004992.3(MECP2):c.316C>T (p.Arg106Trp) MECP2 May 27, 2017 MedGen:C0035372,OMIM:312750,Orphanet:ORPHA778,SNOMED CT:68618008;MedGen:C1968556,OMIM:300673,Orphanet:ORPHA209370;MedGen:CN517202 Rett syndrome;Severe neonatal-onset encephalopathy with microcephaly;not provided de novo;germline;unknown X 154032268 GATGACCCCACCCTGCCTGAAGGCTGGACACGGAAGCTTAAGCAAAGGAAATCTGGCCGCT 121912671 33378 NM_005199.4(CHRNG):c.1408C>T (p.Arg470Ter) CHRNG Aug 01, 2006 MedGen:C0265261,OMIM:265000,Orphanet:ORPHA294060 Multiple pterygium syndrome Escobar type germline 2 232545570 CAGGGGAATGAGGAGTGGTTCCTGGTGGGCCGAGTGCTGGACCGCGTCTGCTTCCTGGCCA 122445099 26767 NM_000489.4(ATRX):c.7156C>T (p.Arg2386Ter) ATRX Apr 25, 2016 MedGen:C1845055,OMIM:301040,Orphanet:ORPHA847 ATR-X syndrome germline X 77520832 AGACAAGCCAGCCAGGAGCTTGATGTTAAACGAAGAGAAGCAATCTACAATGATGTATTGA 113994150 17163 NM_024075.4(TSEN34):c.172C>T (p.Arg58Trp) TSEN34 Sep 08, 2009 MedGen:C2676465,OMIM:612390 Pontocerebellar hypoplasia type 2C germline 19 54191536 CTCCCGCTGCTGCTGATGCCCGAAGAGGCGCGGCTCTTGGCCGAGATCGGCGCCGTGACTC 763625913 246564 NM_000527.4(LDLR):c.2308C>T (p.Gln770Ter) LDLR Mar 25, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11123341 ACCACGGTGGAGATAGTGACAATGTCTCACCAAGGTAAAGACTGGGCCCTCCCTAGGCCCC 128626248 26296 NM_004006.2(DMD):c.4414C>T (p.Gln1472Ter) DMD Jan 01, 1994 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Duchenne muscular dystrophy germline X 32389605 CAGAAACCAGCCAATTTTGAGCAGCGTCTACAAGAAAGTAAGATGATTTTAGATGAAGTGA 1028347439 485084 NM_032043.2(BRIP1):c.1126C>T (p.Gln376Ter) BRIP1 Aug 20, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 17 61801267 TTTTGTCCCTACAACTATCTTCTAGATGCACAAATAAGGGAAAGTGTGAGTATATGTGTAA 587777366 132690 NM_022166.3(XYLT1):c.1441C>T (p.Arg481Trp) XYLT1 Jan 01, 2014 MedGen:C4014294,OMIM:615777 Desbuquois dysplasia 2 germline 16 17141299 TGCGACGCTCACATGTGGCGCCTGGGAGATCGGCGGATCCCAGAGGGCATTGCCGTGGATG 369614706 440125 NM_001080463.1(DYNC2H1):c.1151C>T (p.Ala384Val) DYNC2H1 Jun 01, 2017 MedGen:C0265275,Orphanet:ORPHA474,SNOMED CT:75049004 Jeune thoracic dystrophy paternal 11 103120705 GTTAATGTATGTAGCCCTTGTGGAAAGCTGCGGTGTCTCAATATGAAAAGATTATTGCACC 387906893 39406 NM_019887.5(DIABLO):c.377C>T (p.Ser126Leu) DIABLO Jun 23, 2017 MedGen:C3279948,OMIM:614152;MedGen:CN517202 Deafness, autosomal dominant 64;not provided germline 12 122216808 AATATACAAGTTTACTTGGGAAAATGAATTCAGAGGAGGAAGATGAAGTGTGGCAGGTGAT 104894221 21381 NM_022725.3(FANCF):c.16C>T (p.Gln6Ter) FANCF Jan 01, 2000 MedGen:C3469526,OMIM:603467 Fanconi anemia, complementation group F germline 11 22625795 GCCTTCGCGCACCTCATGGAATCCCTTCTGCAGCACCTGGATCGCTTTTCCGAGCTTCTGG 137852446 25318 NM_000132.3(F8):c.5443C>T (p.Gln1815Ter) F8 Dec 01, 1993 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154904954 TATTCTAGCCTTATTTCTTATGAGGAAGATCAGAGGCAAGGAGCAGAACCTAGAAAAAACT 771111145 192182 NM_000153.3(GALC):c.205C>T (p.Arg69Ter) GALC Jan 19, 2017 MedGen:C0023521,OMIM:245200,Orphanet:ORPHA487,SNOMED CT:192782005 Galactosylceramide beta-galactosidase deficiency germline 14 87988514 TTTGAAAACTTTTTTTTTTAGGCAACCTCCCGACTTCTAGTAAATTACCCAGAGCCCTATC 137853241 29974 NM_000545.6(HNF1A):c.1859C>T (p.Thr620Ile) HNF1A Sep 01, 1999 MedGen:C1838100,OMIM:600496 Maturity-onset diabetes of the young, type 3 germline 12 121001155 TGCTGCCATCCAACCACAGCGTCATCGAGACCTTCATCTCCACCCAGATGGCCTCTTCCTC 778809577 470393 NM_000022.3(ADA):c.703C>T (p.Arg235Trp) ADA Oct 03, 2016 MedGen:C1863236,OMIM:102700,Orphanet:ORPHA277 Severe combined immunodeficiency due to ADA deficiency germline 20 44622906 CTACAGGCTGTGGACATACTCAAGACAGAGCGGCTGGGACACGGCTACCACACCCTGGAAG 63750843 96592 NM_000251.2(MSH2):c.508C>T (p.Gln170Ter) MSH2 Aug 03, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Lynch syndrome;not provided germline 2 47410235 CAGGTTGGAGTTGGGTATGTGGATTCCATACAGAGGAAACTAGGACTGTGTGAATTCCCTG -1 428105 NM_020184.3(CNNM4):c.1555C>T (p.Arg519Ter) CNNM4 Mar 02, 2016 MedGen:C1857588,OMIM:217080,Orphanet:ORPHA1021 Cone-rod dystrophy amelogenesis imperfecta germline 2 96797521 TTCCACGCTCTTCTTCCGGCAGCTGACAACCGAAGCCGGAAGCGGGTGTCTGAGAAGAACA 752514808 370985 NM_020822.2(KCNT1):c.1066C>T (p.Arg356Trp) KCNT1 May 08, 2017 MedGen:CN517202 not provided germline 9 135765061 TTCGAGGAGCTCGTCTACCTCTGGATGGAGCGGCAGAAGTCAGGGGGCAACTACAGCCGCC 1064796618 407781 NM_000264.4(PTCH1):c.2701C>T (p.Gln901Ter) PTCH1 Sep 07, 2017 MedGen:CN517202 not provided germline 9 95461858 GGCAGCCGCGATAAGCCCATCGACATCAGCCAGGTACTCCAGCTGCTGGGCACTGAGGGCG 397508442 68243 NM_000492.3(CFTR):c.2834C>T (p.Ser945Leu) CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008;MedGen:C0238339,OMIM:167800,Orphanet:ORPHA676,SNOMED CT:68072000 Cystic fibrosis;Hereditary pancreatitis germline;unknown 7 117603708 TACCACTGGTGCATACTCTAATCACAGTGTCGAAAATTTTACACCACAAAATGTTACATTC 912986968 481374 NM_020964.2(EPG5):c.1924C>T (p.Arg642Ter) EPG5 Oct 25, 2017 MedGen:C1855772,OMIM:242840,Orphanet:ORPHA1493 Absent corpus callosum cataract immunodeficiency maternal 18 45943180 AATAGAGCACGCTATAGGCAGTTTGTGAAGCGAATTGGTTATATGATCAGGTAATACTGCT 104894597 16606 NM_000263.3(NAGLU):c.1693C>T (p.Arg565Trp) NAGLU Jun 14, 2016 MedGen:C0086648,OMIM:252920,Orphanet:ORPHA79270,SNOMED CT:59990008;MedGen:C0026706,SNOMED CT:88393000 Mucopolysaccharidosis, MPS-III-B;Sanfilippo syndrome germline 17 42543699 GCCTTCCGCTACGACCTGCTGGACCTCACTCGGCAGGCAGTGCAGGAGCTGGTCAGCTTGT 797044811 204268 NM_000084.4(CLCN5):c.1399C>T (p.Arg467Ter) CLCN5 Sep 25, 2014 MedGen:C1848336,OMIM:300009 Dent disease 1 germline X 50088749 CCTAGCATGGCTGTTGGTGCTATAGCAGGTCGACTTCTAGGAGTAGGAATGGAACAGCTGG 369532274 98388 NM_000152.4(GAA):c.2512C>T (p.Gln838Ter) GAA Sep 14, 2016 MedGen:C0017921,OMIM:232300,Orphanet:ORPHA365,SNOMED CT:124462004,SNOMED CT:237967002 Glycogen storage disease, type II germline 17 80118223 GGCCCTGGCCTCACAACCACAGAGTCCCGCCAGCAGCCCATGGCCCTGGCTGTGGCCCTGA 121965079 26886 NM_000260.3(MYO7A):c.448C>T (p.Arg150Ter) MYO7A Jun 08, 2012 MedGen:C1568247,OMIM:276900,Orphanet:ORPHA231169;MedGen:C1848638 Usher syndrome, type 1;Usher syndrome, type 1B germline 11 77156069 AACTGCTACTTCAACATGAAACGCAACAGCCGAGACCAGTGCTGCATCATCAGGTGGGCGG 587783554 169892 NM_178151.2(DCX):c.478C>T (p.Gln160Ter) DCX Feb 08, 2013 Human Phenotype Ontology:HP:0002282,MedGen:C0008519 Heterotopia germline X 111401217 GTAAAAACATCTGCCAATATGAAAGCCCCCCAGTCCTTGGCTAGCAGCAACAGTGCACAGG 895130488 417870 NM_002816.4(PSMD12):c.601C>T (p.Arg201Ter) PSMD12 Jun 08, 2017 MedGen:CN249119,OMIM:617516 Stankiewicz-Isidor syndrome germline 17 67347395 AGGCTCTGCCTAGCTGTGAAGGATTACATTCGAACACAAATCATCAGCAAGAAAATTAACA 200220845 101678 NM_017780.3(CHD7):c.2839C>T (p.Arg947Ter) CHD7 Feb 20, 2013 MedGen:C0265354,OMIM:214800,Orphanet:ORPHA138,SNOMED CT:47535005 CHARGE association germline 8 60822027 TAATGGGATTTACTATATTTGAAACAGGAGCGACCTCCTGCTGATGATTGGAAGAAATCGG 28933696 24258 NM_000435.2(NOTCH3):c.505C>T (p.Arg169Cys) NOTCH3 Jun 06, 2014 MedGen:C1272305,OMIM:125310,SNOMED CT:390936003;MedGen:CN517202 Cerebral autosomal dominant arteriopathy with subcortical infarcts and leukoencephalopathy;not provided germline 19 15192134 GTGGATGAGTGCCGGGTGGGTGAGCCCTGCCGCCATGGTGGCACCTGCCTCAACACACCTG 267608501 153559 NM_003159.2(CDKL5):c.587C>T (p.Ser196Leu) CDKL5 Nov 16, 2016 MedGen:C1839333,OMIM:300672;Human Phenotype Ontology:HP:0200134,MedGen:C0543888;MedGen:CN517202 Early infantile epileptic encephalopathy 2;Epileptic encephalopathy;not provided de novo;germline X 18587986 CTCCCTATGGAAAGTCCGTGGACATGTGGTCGGTGGGCTGTATTCTTGGGGAGCTTAGCGA 121917844 23144 NM_006261.4(PROP1):c.295C>T (p.Arg99Ter) PROP1 Sep 01, 2001 MedGen:C0878683,OMIM:262600 Pituitary hormone deficiency, combined 2 germline 5 177994153 GGGAGGAACCAGTACCCCGACATCTGGGCCCGAGAGAGTCTTGCCCGGGACACTGGCCTCA 797045026 205066 NM_001356.4(DDX3X):c.1084C>T (p.Arg362Cys) DDX3X Aug 06, 2015 MedGen:C4085582,OMIM:300958,Orphanet:ORPHA457260 Mental retardation, X-linked 102 germline X 41345238 ATGTTGGATATGGGGTTTGAGCCTCAGATTCGTAGAATAGTCGAACAAGATACTATGCCTC -1 474312 NM_005732.3(RAD50):c.2770C>T (p.Gln924Ter) RAD50 Apr 18, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 5 132608666 CCTTTGGAAACAACATTGGAAAAGTTCCAGCAAGAAAAAGAAGAATTAATCAACAAAAAAA 387906858 39287 NM_002242.4(KCNJ13):c.496C>T (p.Arg166Ter) KCNJ13 Jul 15, 2011 MedGen:C3280062,OMIM:614186 Leber congenital amaurosis 16 germline 2 232768778 TTTGTGGCGAAGATTGCCCGGCCAAAAAATCGAGCTTTTTCAATTCGCTTTACTGACACAG 137853087 22834 NM_004482.3(GALNT3):c.1774C>T (p.Gln592Ter) GALNT3 Jan 01, 2006 MedGen:C1876187,OMIM:211900,OMIM:610233,Orphanet:ORPHA306661 Tumoral calcinosis, familial, hyperphosphatemic germline 2 165749747 GTTGTCACTGGAGAGCAGATATGGGAGATCCAGAAGGTACCTCAGTGCAATTAATTCATCT 1057517423 357968 NM_000360.3(TH):c.601C>T (p.Gln201Ter) TH Nov 02, 2016 MedGen:C1854299,OMIM:605407 Segawa syndrome, autosomal recessive unknown 11 2167909 CCTCAGGGCTTCTCGGACCAGGTGTACCGCCAGCGCAGGAAGCTGATTGCTGAGATCGCCT 864309539 215114 NM_001271.3(CHD2):c.1942C>T (p.Pro648Ser) CHD2 Sep 10, 2015 MedGen:C3809278,OMIM:615369 Epileptic encephalopathy, childhood-onset germline 15 92956591 TCCAACCATAGGCTCCTGATTACGGGGACCCCTCTTCAGAATTCCCTCAAAGAGCTCTGGT 794726897 190356 NM_001184880.1(PCDH19):c.814C>T (p.Gln272Ter) PCDH19 Apr 01, 2015 MedGen:C1848137,OMIM:300088,Orphanet:ORPHA101039 Early infantile epileptic encephalopathy 9 germline X 100407784 GCCAGCGATCCAGACGAGGGCACCAACGGCCAGGTGGTCTACTCCTTCTATGGCTACGTCA 753823903 265239 NM_000521.3(HEXB):c.508C>T (p.Arg170Ter) HEXB Sep 07, 2016 MedGen:C0036161,OMIM:268800,Orphanet:ORPHA796,SNOMED CT:23849003 Sandhoff disease germline 5 74693701 CTTAAGGCCAACAGAGTTTGGGGAGCATTACGAGGTAAGTTCCATGCAGTTTCATTGTTAC 79843600 131933 NM_006397.2(RNASEH2A):c.719C>T (p.Thr240Met) RNASEH2A Mar 13, 2014 MedGen:C1835912,OMIM:610333 Aicardi Goutieres syndrome 4 germline 19 12813164 TCCCCCAGTTTGTCCGGTTCAGCTGGCGCACGGCCCAGACCATCCTGGAGAAAGAGGCGGA 118203974 16055 NM_139241.3(FGD4):c.823C>T (p.Arg275Ter) FGD4 Sep 13, 2012 MedGen:C1836336,OMIM:609311,Orphanet:ORPHA99954 Charcot-Marie-Tooth disease, type 4H germline 12 32601410 AGTAAATTCCTCTTGCCAGAGCTGGAGAAACGAATGCAAGAATGGTAAGAGGAGTAGATAG 587784376 169557 NM_000540.2(RYR1):c.4225C>T (p.Arg1409Ter) RYR1 Dec 02, 2013 MedGen:CN517202 not provided germline 19 38475382 ACCCAGCCACCGGCCACCCCCACGCTGCCCCGACTCCCTCACGACGTGGTGCCTGCAGACA -1 482178 NM_001083962.1(TCF4):c.1726C>T (p.Arg576Ter) TCF4 Nov 27, 2017 MedGen:CN517202 not provided germline 18 55229000 GAGAAGGAGCGGAGGATGGCCAACAATGCCCGAGAGCGTCTGCGGGTCCGTGACATCAACG 121908106 19291 NM_001080467.2(MYO5B):c.1979C>T (p.Pro660Leu) MYO5B Dec 15, 2008 MedGen:C0341306,OMIM:251850,Orphanet:ORPHA2290,SNOMED CT:235729009 Congenital microvillous atrophy germline 18 49936276 CGACACCTCACTATGTCCGCTGCATCAAGCCCAACGATGAGAAGCTCCCCTTTCAGTAAGT 587783847 170004 NM_000252.2(MTM1):c.664C>T (p.Arg222Ter) MTM1 Feb 08, 2013 MedGen:C0410203,OMIM:310400,Orphanet:ORPHA596,SNOMED CT:46804001 Severe X-linked myotubular myopathy germline X 150641404 GACCTCCGGAGAGTTGCAACTTTTAGGTCCCGAAATCGAATTCCAGTGAGTACTGCAATTA 281865469 40353 NM_001193466.1(KANSL1):c.1816C>T (p.Arg606Ter) KANSL1 Jul 27, 2017 Gene:791085,MedGen:C1864871,OMIM:610443;MedGen:CN517202 Koolen-de Vries syndrome;not provided germline 17 46066569 GTACTGAGCTGTAAGAAGCGGAGGCTTGTTCGACCCAACAGCATCGTTCCTCTTTCCAAGA 768131676 481686 NM_018297.3(NGLY1):c.1405C>T (p.Arg469Ter) NGLY1 Nov 22, 2017 MedGen:CN517202 not provided germline 3 25732339 ATATCTGGGTCAGTGGCTTGGAGAGTAGCCCGAGGTGAAATGGGTCTACAGGTATTTAATT 80357234 69166 NM_007294.3(BRCA1):c.220C>T (p.Gln74Ter) BRCA1 Jul 24, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline 17 43104949 TTTCTCAAACAATTTAATTTCAGGAGCCTACAAGAAAGTACGAGATTTAGTCAACTTGTTG 528722713 364387 NM_002016.1(FLG):c.7249C>T (p.Gln2417Ter) FLG Dec 08, 2016 MedGen:CN517202 not provided germline 1 152307637 AGGTCTGGACGTTCAGGGTCTTTCCTCTACCAGGTGAGCACTCATGAACAGTCTGAGTCCG 63750451 24281 NM_000535.6(PMS2):c.1882C>T (p.Arg628Ter) PMS2 Oct 27, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0009405,Orphanet:ORPHA443090;MedGen:C1838333,OMIM:614337;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Hereditary nonpolyposis colon cancer;Hereditary nonpolyposis colorectal cancer type 4;Lynch syndrome;not provided germline 7 5986883 CTGGACTTTTCTATGAGTTCTTTAGCTAAACGAATAAAGCAGTTACATCATGAAGCACAGC 587777118 106511 NM_000969.4(RPL5):c.664C>T (p.Gln222Ter) RPL5 Aug 01, 2013 MedGen:C0265265,OMIM:612561,SNOMED CT:71988008 Aase syndrome germline 1 92837592 ATGGAAGAAGATGAAGATGCTTACAAGAAACAGTTCTCTCAATACATAAAGAACAGCGTAA 121909652 31301 NM_182925.4(FLT4):c.3341C>T (p.Pro1114Leu) FLT4 Jun 01, 2000 MedGen:C1704423,OMIM:153100,Orphanet:ORPHA79452,SNOMED CT:399889006 Hereditary lymphedema type I germline 5 180613101 ACCTCCCCTTCCTGTTGTCAGGGGCCTCCCCGTACCCTGGGGTGCAGATCAATGAGGAGTT 398122366 94436 NM_025115.3(TTI2):c.1100C>T (p.Pro367Leu) TTI2 Nov 22, 2013 MedGen:C3809853,OMIM:615541,Orphanet:ORPHA391307 Mental retardation, autosomal recessive 39 germline 8 33503763 TTTTACGCAGGACCTACGCAAGAAACCTGCCGGCTTTCGTGAACAGGTGAGGCCCTGGGCT 121908114 19241 NM_018972.2(GDAP1):c.692C>T (p.Pro231Leu) GDAP1 Feb 08, 2017 MedGen:C1842983,OMIM:607831,Orphanet:ORPHA101097;MedGen:CN517202 Charcot-Marie-Tooth disease type 2K;not provided germline 8 74363051 CTGAATTGCAAAGAAGAAATGAAGAAACCCCAGGTAGGTTCTCATTTATATTCTTTCTCTC 63751466 24276 NM_000535.6(PMS2):c.2404C>T (p.Arg802Ter) PMS2 Sep 13, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0009405,Orphanet:ORPHA443090;MedGen:C1838333,OMIM:614337;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:C0265325,OMIM:276300,Orphanet:ORPHA252202,SNOMED CT:61665008;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Hereditary nonpolyposis colon cancer;Hereditary nonpolyposis colorectal cancer type 4;Lynch syndrome;Turcot syndrome;not provided germline;unknown 7 5977629 GACAGCCCTGGGGTCATGTGCCGGCCTTCCCGAGTCAAGCAGATGTTTGCCTCCAGAGCCT 121918399 32919 NM_000041.3(APOE):c.127C>T (p.Arg43Cys) APOE Dec 13, 2007 MedGen:C2673196,OMIM:611771,Orphanet:ORPHA329481,SNOMED CT:446923008 Lipoprotein glomerulopathy germline 19 44907843 CGCCAGCAGACCGAGTGGCAGAGCGGCCAGCGCTGGGAACTGGCACTGGGTCGCTTTTGGG 118204077 16587 NM_000237.2(LPL):c.808C>T (p.Arg270Cys) LPL Jan 01, 1994 MedGen:C0023817,OMIM:238600,Orphanet:ORPHA309015,SNOMED CT:238086005,SNOMED CT:275598004 Hyperlipoproteinemia, type I germline 8 19955873 GTGGACCAGCTAGTGAAGTGCTCCCACGAGCGCTCCATTCATCTCTTCATCGACTCTCTGT 200280742 359940 NM_033305.2(VPS13A):c.3889C>T (p.Arg1297Ter) VPS13A Dec 05, 2016 MedGen:CN517202 not provided germline 9 77302991 CTGCCATTAAATCTTGAGGTTGTGGTTGAACGAAATTTATGCTGGGAGTGGTACCAGGAAG 4010613 26352 NM_000033.3(ABCD1):c.1849C>T (p.Arg617Cys) ABCD1 Aug 01, 1994 MedGen:C0162309,OMIM:300100,Orphanet:ORPHA43,SNOMED CT:65389002 Adrenoleukodystrophy germline X 153743055 GGTGGCGAGAAGCAGAGAATCGGCATGGCCCGCATGTTCTACCACAGGTGAGCACTCCGGG 118204428 15510 NM_000035.3(ALDOB):c.10C>T (p.Arg4Ter) ALDOB Nov 13, 2014 Human Phenotype Ontology:HP:0005973,MedGen:C0016751,OMIM:229600,Orphanet:ORPHA469,SNOMED CT:20052008 Hereditary fructosuria germline;unknown 9 101430878 CTCTTTTCCAGACCTGTCACCATGGCCCACCGATTTCCAGCCCTCACCCAGGAGCAGAAGA 63751277 95275 NM_000249.3(MLH1):c.1609C>T (p.Gln537Ter) MLH1 Sep 05, 2013 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Lynch syndrome germline 3 37040236 AACCACTCCTTCGTGGGCTGTGTGAATCCTCAGTGGGCCTTGGCACAGCATCAAACCAAGT 80338948 32048 NM_004004.5(GJB2):c.427C>T (p.Arg143Trp) GJB2 Jun 16, 2017 MedGen:C1844678,OMIM:304400,Orphanet:ORPHA383;MedGen:C2675750,OMIM:601544;MedGen:C2673759,OMIM:220290;MedGen:C2673759,OMIM:220290;Human Phenotype Ontology:HP:0000365,MedGen:C0018772;MedGen:C1865234,OMIM:602540;MedGen:C1835678,OMIM:148210;MedGen:C1835672,OMIM:148350,Orphanet:ORPHA2202;MedGen:C0266004,OMIM:149200,Orphanet:ORPHA2698,SNOMED CT:1271009;MedGen:C0265964,OMIM:124500,Orphanet:ORPHA494,SNOMED CT:24559001;MedGen:CN043648,Orphanet:ORPHA87884;MedGen:CN517202 Deafness, X-linked 2;Deafness, autosomal dominant 3a;Deafness, autosomal recessive 1A;Deafness, autosomal recessive 1A;Hearing impairment;Hystrix-like ichthyosis with deafness;Keratitis-ichthyosis-deafness syndrome, autosomal dominant;Keratoderma palmoplantar deafness;Knuckle pads, deafness AND leukonychia syndrome;Mutilating keratoderma;Nonsyndromic hearing loss and deafness;not provided germline;unknown 13 20189155 TGGTGGACCTACACAAGCAGCATCTTCTTCCGGGTCATCTTCGAAGCCGCCTTCATGTACG 5030846 15627 NM_000277.2(PAH):c.727C>T (p.Arg243Ter) PAH Aug 22, 2017 MedGen:C0031485,OMIM:261600,Orphanet:ORPHA716,SNOMED CT:154735006;MedGen:CN517202 Phenylketonuria;not provided germline 12 102852930 TTCATCCCAGCTTGCACTGGTTTCCGCCTCCGACCTGTGGCTGGCCTGCTTTCCTCTCGGG 1057520733 372280 NM_130799.2(MEN1):c.781C>T (p.Gln261Ter) MEN1 Jul 14, 2017 MeSH:D018761,MedGen:C0025267,OMIM:131100,Orphanet:ORPHA652,SNOMED CT:30664006;MedGen:CN517202 Multiple endocrine neoplasia, type 1;not provided germline 11 64807554 ACCGACTCGCTGGAGCTTCTGCAGCTGCAGCAGGTGAGGGCTGAGCCAATGGGGCAGGACT 1057519092 361701 NM_001005463.2(EBF3):c.487C>T (p.Arg163Trp) EBF3 Jan 06, 2017 MedGen:CN239924 EBF3-related disorder de novo 10 129957325 TAAAACCACTGTTTACAATTGCTCCACAGCCGGTGCTGTGACAAGAAAAGTTGTGGCAATA 724159990 171754 NM_000663.4(ABAT):c.631C>T (p.Leu211Phe) ABAT Jan 01, 2014 MedGen:C0342708,OMIM:613163,Orphanet:ORPHA2066,SNOMED CT:237941007 Gamma-aminobutyric acid transaminase deficiency germline 16 8768220 TAGGCCCCTGGCTGCCCCGACTACAGCATCCTCTCCTTCATGGGCGCGTTCCATGGGAGGA 1057518822 360950 NM_025114.3(CEP290):c.2941C>T (p.Gln981Ter) CEP290 Mar 07, 2016 Human Phenotype Ontology:HP:0000618,MedGen:C0456909;Human Phenotype Ontology:HP:0011398,MedGen:C1842364;Human Phenotype Ontology:HP:0002419,MedGen:C1865060;Human Phenotype Ontology:HP:0000639,MedGen:C0028738 Blindness;Central hypotonia;Molar tooth sign on MRI;Nystagmus unknown 12 88102888 GAACTGACTGCTAAGTACAGGGACATCTTGCAAAAAGATAATATGCTTGTTCAAAGAACAA 104894853 25526 NM_000202.7(IDS):c.998C>T (p.Ser333Leu) IDS Aug 29, 2013 MedGen:C0026705,OMIM:309900,SNOMED CT:70737009 Mucopolysaccharidosis, MPS-II germline;maternal X 149490322 TGGCCAACAGCACCATCATTGCATTTACCTCGGATCATGGTAAGCATTTTGAAATTCCCTG 72653749 426842 NM_001171.5(ABCC6):c.3823C>T (p.Arg1275Ter) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16157722 ATCGAGTTCCGGGACTTTGGGCTAAGATACCGACCTGAGCTCCCGCTGGCTGTGCAGGGCG -1 475731 NM_000051.3(ATM):c.3043C>T (p.Gln1015Ter) ATM Jun 05, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 11 108271372 AATATGGACTCTGAGAACACAAGGGATGCTCAAGGACAGTTTCTTACAGTAATTGGAGCAT 121912303 47554 NM_001363.4(DKC1):c.5C>T (p.Ala2Val) DKC1 May 10, 2012 MedGen:C1148551,OMIM:305000 Dyskeratosis congenita X-linked germline X 154762970 GCGGCACGCACGCGGTGCAGGGTAACATGGCGGATGCGGAAGGTAAGGGCTGCAGGCTTCC 80358215 31123 NM_002065.6(GLUL):c.1021C>T (p.Arg341Cys) GLUL Nov 03, 2005 MedGen:C1864910,OMIM:610015,Orphanet:ORPHA71278 Glutamine deficiency, congenital germline 1 182384506 CAGGAGAAGAAGGGTTACTTTGAAGATCGTCGCCCCTCTGCCAACTGCGACCCCTTTTCGG 794727316 192602 NM_198525.2(KIF7):c.61C>T (p.Arg21Ter) KIF7 Mar 24, 2016 Gene:46,MedGen:C0796147,OMIM:200990,Orphanet:ORPHA36;MedGen:CN517202 Acrocallosal syndrome, Schinzel type;not provided germline 15 89652870 GCTGAGGAGGCCCCAGTGCGGGTTGCCCTGCGAGTTCGACCACTGCTGCCCAAGGAGCTGC 782246658 209093 NM_004187.3(KDM5C):c.3118C>T (p.Gln1040Ter) KDM5C Sep 11, 2014 MedGen:C1845243,OMIM:300534,Orphanet:ORPHA85279 Mental retardation, syndromic, Claes-Jensen type, X-linked germline X 53195918 CGGGCCTGGATTGCTGATGTTGATGAGATCCAAGTGAGGACCCTGCCACTCCCACCCCAGG 777323132 268228 NM_000070.2(CAPN3):c.1318C>T (p.Arg440Trp) CAPN3 Feb 27, 2017 MedGen:C1869123,OMIM:253600,Orphanet:ORPHA267 Limb-girdle muscular dystrophy, type 2A germline 15 42399616 ACAGTGTCTGTGAACGAGGGCCGCTGGGTACGGGGTTGCTCTGCCGGAGGCTGCCGCAACT 377215510 101854 NM_020451.2(SELENON):c.1315C>T (p.Arg439Ter) SELENON Jul 11, 2017 MedGen:C0410180,OMIM:602771,SNOMED CT:240063002;MedGen:CN517202 Eichsfeld type congenital muscular dystrophy;not provided germline 1 25812720 TCCTACTTGCCGTTCACTGAGGCCTTCGACCGAGCCAAGGCTGAGAACAAGCTGGTGCACT 863225289 214547 NM_001323289.1(CDKL5):c.2716C>T (p.Gln906Ter) CDKL5 Aug 10, 2015 MedGen:C1839333,OMIM:300672 Early infantile epileptic encephalopathy 2 de novo X 18628590 AAGGGCAGGCCAGCCCTCCAGCTGCCAGGTCAGATGGATCCTGGTTGGCATGTGTCCTCTG 104893666 27982 NM_003124.4(SPR):c.488C>T (p.Pro163Leu) SPR Sep 01, 2006 MedGen:C0268468,OMIM:612716,Orphanet:ORPHA70594,SNOMED CT:45116002 Sepiapterin reductase deficiency germline 2 72888497 TTAACATCTCGTCCCTCTGTGCCCTGCAACCTTTCAAAGGCTGGGCGCTGTACTGTGCAGG 104893919 19131 NM_000112.3(SLC26A2):c.532C>T (p.Arg178Ter) SLC26A2 Feb 02, 2017 MedGen:C0265274,OMIM:600972,Orphanet:ORPHA93298,SNOMED CT:14870002;MedGen:C1850554,OMIM:256050,Orphanet:ORPHA56304;MedGen:C0220726,OMIM:222600,Orphanet:ORPHA628,SNOMED CT:58561002;MedGen:C1847593,OMIM:226900,Orphanet:ORPHA93307;MedGen:C0029422;MedGen:CN517202 Achondrogenesis, type IB;Atelosteogenesis type 2;Diastrophic dysplasia;Multiple epiphyseal dysplasia 4;Osteochondrodysplasia;not provided germline;unknown 5 149978184 CTGTGCCTTATGATTGGTGAGACAGTTGACCGAGAACTACAGAAAGCTGGCTATGACAATG 727503887 177194 NM_000098.2(CPT2):c.886C>T (p.Arg296Ter) CPT2 Apr 24, 2017 MedGen:C0342790,Orphanet:ORPHA157,SNOMED CT:238002005;MedGen:C1833511,OMIM:600649,Orphanet:ORPHA228305;MedGen:C1833508,OMIM:255110,Orphanet:ORPHA228302 Carnitine palmitoyltransferase II deficiency;Carnitine palmitoyltransferase II deficiency, infantile;Carnitine palmitoyltransferase II deficiency, myopathic, stress-induced germline;unknown 1 53210560 TTTCCCCTGGCATACCTGACCAGTGAGAACCGAGACATCTGGGCAGAGCTCAGGCAGAAGC 281875332 132659 NM_001101.4(ACTB):c.193C>T (p.Leu65Phe) ACTB Apr 15, 2014 MedGen:C1855722,OMIM:243310,OMIM:608578,Orphanet:ORPHA2995 Baraitser-Winter syndrome 1 germline 7 5529331 GGCGACGAGGCCCAGAGCAAGAGAGGCATCCTCACCCTGAAGTACCCCATCGAGCACGGCA 397507629 65958 NM_000059.3(BRCA2):c.2455C>T (p.Gln819Ter) BRCA2 Oct 18, 2016 MedGen:C2675520,OMIM:612555 Breast-ovarian cancer, familial 2 germline 13 32336810 TTAACCAAAAATATTCCCATGGAAAAGAATCAAGATGTATGTGCTTTAAATGAAAATTATA -1 442985 NM_021007.2(SCN2A):c.719C>T (p.Ala240Val) SCN2A Oct 31, 2017 MedGen:CN517202 not provided germline 2 165310344 TGTTTGTAGGCCTGAAGACCATTGTGGGGGCCCTGATCCAGTCAGTGAAGAAGCTTTCTGA 863223649 210333 NM_000214.2(JAG1):c.910C>T (p.Gln304Ter) JAG1 Apr 02, 2015 MedGen:CN517202 not provided germline 20 10652227 TTGGCAGATCTCAATTACTGTGGGACTCATCAGCCGTGTCTCAACGGGGGAACTTGTAGCA 104894374 23049 NM_002905.3(RDH5):c.469C>T (p.Arg157Trp) RDH5 Sep 01, 2000 MedGen:C4016746 Fundus albipunctatus, autosomal recessive germline 12 55721847 CTGCTGCCTCTGCTGCAGCAAGCCCGGGGCCGGGTGATCAACATCACCAGCGTCCTGGGTC 137852937 19042 NM_170726.2(ALDH4A1):c.1055C>T (p.Ser352Leu) ALDH4A1 Sep 01, 1998 MedGen:C2931835,OMIM:239510,Orphanet:ORPHA79101,SNOMED CT:124177001 Deficiency of pyrroline-5-carboxylate reductase germline 1 18877498 AGTACGGTGGCCAGAAGTGTTCCGCGTGCTCGCGTCTCTACGTGCCGCACTCGCTGTGGCC 747349942 259832 NM_000426.3(LAMA2):c.5476C>T (p.Arg1826Ter) LAMA2 Jul 31, 2017 MedGen:CN117977;MedGen:CN517202 Laminin alpha 2-related dystrophy;not provided germline 6 129401254 AAAAAGAAGGAGGCTGTTGAAAGCGGCAAACGACAAATTGAGAACACTTTAAAAGAGGGCA 121965044 15196 NM_000274.3(OAT):c.1250C>T (p.Pro417Leu) OAT Sep 20, 2016 MedGen:C0018425;Human Phenotype Ontology:HP:0012026,MedGen:C0599035,OMIM:258870,SNOMED CT:276426004 Gyrate atrophy;Ornithine aminotransferase deficiency germline 10 124398012 CCCATGGCGACATTATCAGGTTTGCGCCTCCGCTGGTGATCAAGGAGGATGAGCTTCGAGA 794727579 194094 NM_206933.2(USH2A):c.6601C>T (p.Gln2201Ter) USH2A Jun 26, 2014 MedGen:C1848634,OMIM:276901 Usher syndrome, type 2A germline 1 215998943 AGTGTCATCTATAACAGTACAGAACTTTTCCAGGATCATATGCTACAATACGTTTTACCTG 200213585 360001 NM_018451.4(CENPJ):c.469C>T (p.Gln157Ter) CENPJ Dec 05, 2016 MedGen:CN517202 not provided germline 13 24912045 AAAAAGCTGAAAGAAGTACAACAGAAGAAGCAGGAACAATTGAAGAGGCAACAGTTGGAGC 537456518 106548 NM_024790.6(CSPP1):c.2773C>T (p.Arg925Ter) CSPP1 Feb 17, 2014 MedGen:C3810212,OMIM:615636 Joubert syndrome 21 germline 8 67164468 CTTCGTAGTGAAGAGAGGCGTCTACAAGAGCGATTGCTACACATGGACAGTGATGATGAAA 80358196 15724 NM_000147.4(FUCA1):c.244C>T (p.Gln82Ter) FUCA1 Aug 01, 1993 MedGen:C0016788,OMIM:230000,Orphanet:ORPHA349,SNOMED CT:64716005 Fucosidosis germline 1 23868043 TGGGGCAGCGAGTGGTTCTGGTGGCACTGGCAGGGCGAGGGGCGGCCGCAGTACCAGCGCT 140403642 453359 NM_021942.5(TRAPPC11):c.1192C>T (p.Arg398Ter) TRAPPC11 Mar 28, 2017 MedGen:C3809236,OMIM:615356 Limb-girdle muscular dystrophy, type 2S germline 4 183682810 GTTCTTGACTTTTATGGACAAAGATCATGGCGACAAGGAATACTAAGTAAATAATTTTTCC 587780563 143264 NM_003491.3(NAA10):c.346C>T (p.Arg116Trp) NAA10 Oct 24, 2016 MedGen:C3275447,OMIM:300855,Orphanet:ORPHA276432;MedGen:CN517202 N-terminal acetyltransferase deficiency;not provided de novo;germline X 153932111 CTCAGCAGTGCCTTGTTCCCCTGCAGTAACCGGGCCGCCCTGCACCTCTATTCCAACACCC 780587095 264783 NM_020366.3(RPGRIP1):c.2668C>T (p.Arg890Ter) RPGRIP1 Oct 30, 2017 MedGen:CN517202 not provided germline 14 21326131 TTAGAGCCTGGCTCGTATCTTGGCCGAGCCCGAGTGCCTTTACTGCCTCTTGCAAAAAATG 876661096 232106 NM_000214.2(JAG1):c.871C>T (p.Gln291Ter) JAG1 Oct 19, 2015 MedGen:CN517202 not provided germline 20 10652483 CAGTGCCTCTGTGAGACCAACTGGGGCGGCCAGCTCTGTGACAAAGGTATGGCCCTTAGGG 121918145 15700 NM_000312.3(PROC):c.629C>T (p.Pro210Leu) PROC Mar 21, 1992 MedGen:C2676759,OMIM:612304 Thrombophilia, hereditary, due to protein C deficiency, autosomal recessive germline 2 127426178 ACACAGAAGACCAAGAAGACCAAGTAGATCCGCGGCTCATTGATGGGAAGATGACCAGGCG 121907942 19071 NM_000152.4(GAA):c.1634C>T (p.Pro545Leu) GAA Dec 01, 1994 MedGen:CN568813 Glycogen storage disease II, adult form germline 17 80111023 ACAATGAGCTGGAGAACCCACCCTACGTGCCTGGTCAGCTCGCCCCCCACCTACCCTGGGG 398124395 102009 NM_024301.4(FKRP):c.941C>T (p.Thr314Met) FKRP Nov 08, 2017 MedGen:C1847759,OMIM:606612;MedGen:C3150413,OMIM:613153;MedGen:C1846672,OMIM:607155,Orphanet:ORPHA34515;MedGen:CN517202 Congenital muscular dystrophy-dystroglycanopathy (with or without mental retardation) type B5;Congenital muscular dystrophy-dystroglycanopathy with brain and eye anomalies type A5;Limb-girdle muscular dystrophy-dystroglycanopathy, type C5;not provided germline 19 46756391 CGCCCGCCTACCTCTACGAGGAGCGCTGGACGCCCCCCTGCTGCCTGCGCGCGCTGCGCGA 587777061 79342 NM_030632.2(ASXL3):c.1210C>T (p.Gln404Ter) ASXL3 Feb 05, 2013 MedGen:C3809650,OMIM:615485,Orphanet:ORPHA352577 Bainbridge-Ropers syndrome germline 18 33738614 GTTTCTGCACAGACAGCCTTGGCAGAACAACAGCCAAAAAGCATGAAAAGCCCAGCTTCTC 267608395 153513 NM_003159.2(CDKL5):c.1675C>T (p.Arg559Ter) CDKL5 May 18, 2017 MedGen:C2748910,Orphanet:ORPHA3095;MedGen:C1839333,OMIM:300672;MedGen:CN517202 Atypical Rett syndrome;Early infantile epileptic encephalopathy 2;not provided de novo;germline;unknown X 18604599 AACCGAAATGAGGGAACGCTGGACTCACGTCGAACCACAACCAGACATTCTAAGACGATGG 879255126 246493 NM_000527.4(LDLR):c.2056C>T (p.Gln686Ter) LDLR Dec 16, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11120438 GGCTGCCAGTATCTGTGCCTCCCTGCCCCGCAGATCAACCCCCACTCGCCCAAGTTTACCT 587777596 152773 NM_003995.3(NPR2):c.1963C>T (p.Arg655Cys) NPR2 Dec 01, 2013 MedGen:C4014690,OMIM:615923,Orphanet:ORPHA329191 Epiphyseal chondrodysplasia, miura type germline 9 35805586 CTCAAGTCCTCCAACTGTGTGGTGGATAGTCGTTTTGTGCTCAAAATCACAGACTATGGCC 886039558 260337 NM_000044.4(AR):c.2257C>T (p.Arg753Ter) AR Jul 28, 2016 MedGen:CN517202 not provided germline X 67717561 ATGGGGCTCATGGTGTTTGCCATGGGCTGGCGATCCTTCACCAATGTCAACTCCAGGATGC 587781338 150590 NM_001128425.1(MUTYH):c.940C>T (p.Gln314Ter) MUTYH Oct 03, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1837991,OMIM:608456,Orphanet:ORPHA247798;MedGen:CN517202 Hereditary cancer-predisposing syndrome;MYH-associated polyposis;not provided germline 1 45332080 GACACTCAACCCTGTGCCTCTCAGGTGGAGCAGGAACAGCTCTTAGCCTCAGGGAGCCTGT 121964862 27438 NM_000548.4(TSC2):c.1432C>T (p.Gln478Ter) TSC2 Jun 07, 2017 MedGen:C1860707,OMIM:613254;MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000 Tuberous sclerosis 2;Tuberous sclerosis syndrome germline 16 2063042 GTGCTGTCCTTTGTGCTGCTCATCAACAGGCAGTTCTATGAGGTGCGTGTCCAGGCGGCCG 368482584 48156 NM_019032.5(ADAMTSL4):c.2008C>T (p.Arg670Ter) ADAMTSL4 Aug 01, 2010 MedGen:C2673634,OMIM:225100 Ectopia lentis, isolated autosomal recessive germline 1 150557296 CCCCTGGGGTCTCCAGCTGCGTACTGGAAACGAGTGGGACACTCTGCATGCTCAGCGTCCT 587779752 131903 NM_022458.3(LMBR1):c.423+4915C>T LMBR1 Nov 21, 2014 MedGen:C1868114,OMIM:174500,Orphanet:ORPHA93336;MedGen:C1861099,OMIM:188740,Orphanet:ORPHA988;MedGen:C0241397,SNOMED CT:205308004 Polydactyly, preaxial II;Tibia, hypoplasia or aplasia of, with polydactyly;Triphalangeal thumb germline 7 156791474 TTGGCAAACTTACATAAAAGTGACCTTGTACTGTATTTTATGACCAGATGACTTTTTCCCC 754099015 204988 NM_032856.3(WDR73):c.1039C>T (p.His347Tyr) WDR73 Jun 29, 2015 MedGen:C0795949,OMIM:251300 Galloway-Mowat syndrome germline 15 84643568 GGGATGGACCCTGCTCCTTTGGTCACCACCCACACCTGGCATCCCTGCAGACCAAGGACTT 886039230 259290 NM_145331.2(MAP3K7):c.1535C>T (p.Pro512Leu) MAP3K7 Sep 30, 2016 MedGen:C4310697,OMIM:617137 Frontometaphyseal dysplasia 2 germline 6 90518552 ACATTCCTGATTATTTTCAGCCTCTAGCACCGTGCCCAAACTCCAAAGAATCTATGGCAGT 140263599 244068 NM_002075.3(GNB3):c.200C>T (p.Ser67Phe) GNB3 Aug 12, 2016 MedGen:C4310758,OMIM:617024 Night blindness, congenital stationary, type 1h germline 12 6843073 AGATTTACGCCATGCACTGGGCCACTGATTCTAAGTGAGGCTTGGGGGGGAACCGAGAATG 104894757 25889 NM_000054.4(AVPR2):c.541C>T (p.Arg181Cys) AVPR2 Jan 01, 1998 MedGen:C1563705,OMIM:304800 Nephrogenic diabetes insipidus, X-linked germline X 153906047 AGCCTGCCCCAGCTCTTCATCTTCGCCCAGCGCAACGTGGAAGGTGGCAGCGGGGTCACTG 397514362 36349 NM_000060.4(BTD):c.466C>T (p.Gln156Ter) BTD Dec 04, 2012 MedGen:C0220754,OMIM:253260,Orphanet:ORPHA79241,SNOMED CT:8808004 Biotinidase deficiency not provided 3 15644322 TATTTACACCTTTTTTTCCTCTAGGTGCTCCAGCGCCTGAGTTGTATGGCCATCAGGGGAG 777663097 367679 NM_006005.3(WFS1):c.2170C>T (p.Pro724Ser) WFS1 Jun 26, 2015 MedGen:CN517202 not provided germline 4 6301965 AACAGCGCCGAGTCTGCCATCAACATGCTCCCGTTCTTCATCGGCGACTGGATGCGCTGCC 863224995 213885 NM_004006.2(DMD):c.355C>T (p.Gln119Ter) DMD Sep 16, 2015 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Duchenne muscular dystrophy germline X 32823297 GGTTTGATTTGGAATATAATCCTCCACTGGCAGGTAAGAATCCTGATGAATGGTTTCCTTT 387906627 38662 NM_004960.3(FUS):c.1483C>T (p.Arg495Ter) FUS Aug 31, 2010 MedGen:C1842675,OMIM:608030 Amyotrophic lateral sclerosis type 6 germline 16 31191052 CGGGGCCGCGGCGGGGACCGTGGAGGCTTCCGAGGGGGCCGGGGTGGTGGGGACAGAGGTG -1 440160 NM_001080463.1(DYNC2H1):c.6574C>T (p.Leu2192Phe) DYNC2H1 Jun 01, 2017 MedGen:CN674505 Short-rib polydactyly syndrome type III unknown 11 103184992 TGCAGAGATCATGACGAATTCATTATTAATCTCATAAGGGGACTTGGTGGAAATCTGAATA 587781948 151416 NM_000465.3(BARD1):c.1921C>T (p.Arg641Ter) BARD1 Apr 16, 2017 MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Familial cancer of breast;Hereditary cancer-predisposing syndrome;not provided germline 2 214730491 GTGTTTTTGTCAGGGGTAAAAGCATGTCTACGAAGAAAAGTATGTGAACAGGAAGAAAAGT 104894458 23525 NM_006432.3(NPC2):c.358C>T (p.Pro120Ser) NPC2 Apr 01, 2007 MedGen:C1843366,OMIM:607625 Niemann-Pick disease type C2 germline 14 74484420 CTGAATAAACTACCAGTGAAAAGCGAATATCCCTCTGTAAGTGATACCATTATTGAGGACA 587783854 170011 NM_000252.2(MTM1):c.757C>T (p.Arg253Ter) MTM1 Nov 24, 2017 MedGen:C0410203,OMIM:310400,Orphanet:ORPHA596,SNOMED CT:46804001;MedGen:CN517202 Severe X-linked myotubular myopathy;not provided germline X 150645761 AGTCAGCCTCTTGTCGGTATGAGTGGGAAACGAAATAAAGATGATGAGAAATATCTCGATG 104893811 27553 NM_003242.5(TGFBR2):c.1378C>T (p.Arg460Cys) TGFBR2 Aug 06, 2013 MedGen:C2674876,OMIM:610168;MedGen:CN118826,Orphanet:ORPHA91387;MedGen:CN517202 Loeys-Dietz syndrome 2;Thoracic aortic aneurysm and aortic dissection;not provided germline 3 30674228 ATGGCTCTGGTGCTCTGGGAAATGACATCTCGCTGTAATGCAGTGGGAGGTAGGTGTGGAC 786204095 186290 NM_000166.5(GJB1):c.116C>T (p.Ala39Val) GJB1 Oct 07, 2014 MedGen:CN118851 Charcot-Marie-Tooth Neuropathy X germline X 71223823 TCATCTTCAGAATCATGGTGCTGGTGGTGGCTGCAGAGAGTGTGTGGGGTGATGAGAAATC 144666367 248715 NM_198833.1(SERPINB8):c.850C>T (p.Arg284Ter) SERPINB8 Sep 13, 2016 MedGen:C4310710,OMIM:617115 Peeling skin syndrome 5 germline 18 63987003 GAGGAGAGTTATGACTTGGAGCCTTTCCTTCGAAGATTAGGAATGATCGATGCTTTTGACG 757111744 187014 NM_000152.4(GAA):c.2014C>T (p.Arg672Trp) GAA Jun 14, 2016 MedGen:C0017921,OMIM:232300,Orphanet:ORPHA365,SNOMED CT:124462004,SNOMED CT:237967002 Glycogen storage disease, type II germline;unknown 17 80113001 ACCCAGCTGGGGGCCTTCTACCCCTTCATGCGGAACCACAACAGCCTGCTCAGTCTGGTAG 59966597 77203 NM_000526.4(KRT14):c.1162C>T (p.Arg388Cys) KRT14 Oct 13, 2017 MedGen:CN517202 not provided germline 17 41583347 GGCAGCGTGGAGGAGCAGCTGGCCCAGCTCCGCTGCGAGATGGAGCAGCAGAACCAGGAGT 606231273 167423 NM_015559.2(SETBP1):c.1876C>T (p.Arg626Ter) SETBP1 Aug 26, 2016 MedGen:C4015141,OMIM:616078;MedGen:CN517202 Mental retardation, autosomal dominant 29;not provided germline 18 44951216 GAGTTTCCTGGCACTAAGAAAAGAAAGCGACGACGCAATTTAGCGAAGTTGGCCCAGCTAG 886039391 259646 NM_006147.3(IRF6):c.859C>T (p.Gln287Ter) IRF6 Jul 15, 2016 MedGen:CN517202 not provided germline 1 209790696 CCAGGTCCTGAGCATATTACCAATGAGAAGCAGAAGCTGTTCACTAGCAAGCTGCTGGACG 121909513 33386 NM_000080.3(CHRNE):c.250C>T (p.Arg84Ter) CHRNE May 01, 1997 MedGen:C1837091,OMIM:608931 Myasthenic syndrome, congenital, associated with acetylcholine receptor deficiency germline 17 4902311 TCCCCCACCCCTTAGGATTGGCAGGATTACCGACTCAACTACAGCAAGGACGACTTTGGGG 587783902 168357 NM_133433.3(NIPBL):c.2422C>T (p.Arg808Ter) NIPBL Feb 08, 2013 MedGen:CN029798,OMIM:122470 Cornelia de Lange syndrome 1 germline 5 36985602 GCTGAAGCCTTAAAGCAGAGACCTGATGGGCGATCTGTTTCTGAGTCACTAAGACGTGACC 730882242 181418 NM_001079812.2(DIAPH1):c.2305C>T (p.Gln769Ter) DIAPH1 Feb 01, 2015 Human Phenotype Ontology:HP:0001508,MedGen:C0231246;Human Phenotype Ontology:HP:0001263,MedGen:C4020875;Human Phenotype Ontology:HP:0000252,MedGen:C0424688;MedGen:CN228288;MedGen:C4225261,OMIM:616632,Orphanet:ORPHA477814 Failure to thrive;Global developmental delay;Microcephaly;Seizure disorder;Seizures, cortical blindness, and microcephaly syndrome germline 5 141573518 ACCCCCAAAAAGCTTTATAAGCCAGAGGTGCAGCTCCGGAGGCCAAACTGGTCCAAGGTAA 118203661 58083 NM_000368.4(TSC1):c.2227C>T (p.Gln743Ter) TSC1 Oct 26, 2016 MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000;MedGen:CN517202 Tuberous sclerosis syndrome;not provided germline 9 132902769 GGTCTCTGCTAGAAAGATCAGTTGAAGTTACAAGAGAAGGACATCCAGATGTGGAAGGTTA 199474659 24630 m.3256C>T MT-TL1 Mar 01, 1998 MedGen:C4017627;MedGen:C0162672,OMIM:545000,Orphanet:ORPHA551 Diabetes mellitus, noninsulin-dependent, maternally transmitted;Myoclonus with epilepsy with ragged red fibers germline MT 3256 GTTTGTTAAGATGGCAGAGCCCGGTAATCGCATAAAACTTAAAACTTTACAGTCAGAGGTT 587783747 168543 NM_002397.4(MEF2C):c.565C>T (p.Arg189Ter) MEF2C Nov 09, 2017 MedGen:C3150700,OMIM:613443,Orphanet:ORPHA228384;MedGen:CN517202 Mental retardation, stereotypic movements, epilepsy, and/or cerebral malformations;not provided de novo;germline 5 88751881 AGGAATAGTATGTCTCCTGGTGTAACACATCGACCTCCAAGTGCAGGTAACACAGGTATGT 773159223 358392 NM_000135.2(FANCA):c.154C>T (p.Arg52Ter) FANCA Nov 10, 2016 MedGen:C3469521,OMIM:227650 Fanconi anemia, complementation group A unknown 16 89815912 AAATTAAAGGAATCAGCTGTGCGCCTCCTGCGAAGCCATCAGGACCTGAATGCCCTTTTGC 387907127 40133 NM_145239.2(PRRT2):c.487C>T (p.Gln163Ter) PRRT2 Dec 01, 2011 MedGen:C1868682,OMIM:128200;MedGen:C1865926,OMIM:602066,Orphanet:ORPHA31709 Dystonia 10;Infantile convulsions and paroxysmal choreoathetosis, familial germline 16 29813541 AAGCCAGCCCTTCAACCAGAGCTCCCTACCCAGGAGGACCCCACCCCTGAGATTCTGTCTG 367797185 237023 NM_000789.3(ACE):c.1522C>T (p.Arg508Ter) ACE Jun 14, 2016 Human Phenotype Ontology:HP:0008660,MedGen:C0266313,OMIM:267430,SNOMED CT:204949001;MedGen:CN517202 Renal dysplasia;not provided germline 17 63483494 AAGTATCAGGGGATCTGTCCTCCTGTTACCCGAAACGAAACCCACTTTGATGCTGGAGCTA 387907251 45608 NM_198253.2(TERT):c.2768C>T (p.Pro923Leu) TERT Apr 19, 2012 MedGen:C3553617,OMIM:614742 Pulmonary fibrosis and/or bone marrow failure, telomere-related, 1 germline 5 1264479 CCCTGGGTGGCACGGCTTTTGTTCAGATGCCGGCCCACGGCCTATTCCCCTGGTGCGGCCT 121908740 17005 NM_000022.3(ADA):c.631C>T (p.Arg211Cys) ADA Sep 01, 1994 MedGen:C1863239;MedGen:C1863236,OMIM:102700,Orphanet:ORPHA277 Partial adenosine deaminase deficiency;Severe combined immunodeficiency due to ADA deficiency germline;unknown 20 44623054 TTCCAGGAGGCTGTGAAGAGCGGCATTCACCGTACTGTCCACGCCGGGGAGGTGGGCTCGG 786204009 185793 NM_005957.4(MTHFR):c.244C>T (p.Arg82Trp) MTHFR - MedGen:C1856058,OMIM:236250 Homocysteinemia due to MTHFR deficiency germline 1 11801392 CTTCAGAAACAAACCCCCTACAGGTTTGACCGGATGGCAGCAGGTGGCCCCCTCTACATAG 119479066 20016 NM_022436.2(ABCG5):c.727C>T (p.Arg243Ter) ABCG5 Jan 01, 2001 MedGen:C0342907,OMIM:210250,Orphanet:ORPHA2882,SNOMED CT:238104009 Sitosterolemia germline 2 43826429 GTCCTCCTGGTGGAACTGGCTCGCAGGAACCGAATTGTGGTTCTCACCATTCACCAGCCCC 63750402 426858 NM_001171.5(ABCC6):c.3703C>T (p.Arg1235Trp) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16159514 GACCTAGAGAACAGCATCGTGTCAGTGGAGCGGATGCAGGACTATGCCTGGACGCCCAAGG 387906594 38564 NM_001681.3(ATP2A2):c.2093C>T (p.Ala698Val) ATP2A2 Sep 01, 2010 MedGen:C0265971,OMIM:101900,Orphanet:ORPHA79151,SNOMED CT:400085009 Acrokeratosis verruciformis of Hopf germline 12 110340990 AATTTCTTCAGTCTTTTGATGAGATTACAGCTATGGTGAGCATGTTTGAACATGTACAGGT 370547023 170949 NM_030777.3(SLC2A10):c.1330C>T (p.Arg444Ter) SLC2A10 May 12, 2017 MedGen:C1859726,OMIM:208050,Orphanet:ORPHA3342;MedGen:CN517202 Arterial tortuosity syndrome;not provided germline 20 46726905 GTCCTCAGCGAGATCTACCCTGTGGAGATACGAGGAAGAGCCTTCGCCTTCTGCAACAGCT 774592932 372867 NM_000834.4(GRIN2B):c.1555C>T (p.Arg519Ter) GRIN2B Jan 05, 2017 MedGen:CN517202 not provided germline 12 13615213 GCAGTGGGCTCACTCACCATCAATGAGGAACGATCGGAGGTGGTCGACTTCTCTGTGCCCT 28933990 28139 NM_000326.4(RLBP1):c.700C>T (p.Arg234Trp) RLBP1 Jun 14, 2016 MedGen:C1843816,OMIM:607475,Orphanet:ORPHA85128;MedGen:CN239413;MedGen:C1405854 Bothnia retinal dystrophy;RLBP1-Related Disorders;Retinitis punctata albescens germline 15 89210794 TCTCTGTCACCGCAGGATTCCTTCCCAGCCCGGTTCAAAGCCATCCACTTCATCCACCAGC 587777109 106499 NM_004429.4(EFNB1):c.496C>T (p.Gln166Ter) EFNB1 Feb 18, 2014 MedGen:C0220767,OMIM:304110 Craniofrontonasal dysplasia germline X 68839753 CGCACCATGAAGATCATCATGAAGGTTGGGCAAGGTGAGTGCCTAGTCTGAGGGTCCCCTC 121912646 27730 NM_003235.4(TG):c.4588C>T (p.Arg1530Ter) TG Nov 08, 2017 MedGen:C0342194,OMIM:274700,SNOMED CT:23536000;MedGen:CN517202 Iodotyrosyl coupling defect;not provided germline 8 132923397 GGCCTGCAATGTGACCAGAATGGCCAGTATCGAGCCAGCCAGAAGGACAGGGGCAGTGGGA 397514613 48427 NM_139242.3(MTFMT):c.382C>T (p.Arg128Ter) MTFMT Dec 03, 2012 MedGen:C3554182,OMIM:614947,Orphanet:ORPHA319524 Combined oxidative phosphorylation deficiency 15 germline 15 65026868 TATGATGTTGGAGTAGTGGCTTCGTTTGGCCGACTTTTGAATGAGGCTCTTATTCTTAAAT 121908059 19204 NM_002772.2(TMPRSS15):c.2569C>T (p.Arg857Ter) TMPRSS15 Jan 01, 2002 MedGen:C0268416,OMIM:226200,Orphanet:ORPHA168601,SNOMED CT:124498007,SNOMED CT:190952002 Enterokinase deficiency germline 21 18281139 TCAAATCTGACCTCTCCTCAAACAGTCCCTCGATTAATAGATGAAATTGTCATAAACCCTC 146017816 39057 NM_002052.4(GATA4):c.1325C>T (p.Ala442Val) GATA4 Nov 01, 2008 MedGen:C3280777,OMIM:614429 Ventricular septal defect 1 germline 8 11758471 TGGCCGACAGTCACGGGGACATAATCACTGCGTAATCTTCCCTCTTCCCTCCTCAAATTCC 267606864 15127 NM_021828.4(HPSE2):c.1414C>T (p.Arg472Ter) HPSE2 Jun 11, 2010 MedGen:C0403555,OMIM:236730,SNOMED CT:236533008 Ochoa syndrome germline 10 98490103 GCTGGGCTCCAGCGGAAGCCACGGCCTGGCCGAGTGATCCGGGACAAACTAAGGATTTATG 672601313 171700 NM_000395.2(CSF2RB):c.812C>T (p.Ser271Leu) CSF2RB Jan 01, 2011 MedGen:C3280574,OMIM:614370 Surfactant metabolism dysfunction, pulmonary, 5 germline 22 36930468 CCTGGGAGGTGAGGAAGGAGGTGGCCAGCTCGGTCTCCTTTGGCCTATTCTACAAGCCCAG 397509359 33863 NR_104387.1(TAF1):n.5894C>T TAF1 Oct 18, 2012 MedGen:C1839130,OMIM:314250,Orphanet:ORPHA53351 Dystonia 3, torsion, X-linked not provided X 71529785 GGAAGAATGAACCAAGGCTTTGAGTCTCTTCGTCTCATCTCCGTTTTGATACGTGTCTCCT -1 434377 NM_013227.3(ACAN):c.7090C>T (p.Gln2364Ter) ACAN Sep 28, 2017 Human Phenotype Ontology:HP:0010886,MedGen:C0029421,OMIM:165800,Orphanet:ORPHA2764,SNOMED CT:82562007 Osteochondritis dissecans germline 15 88871525 CACCTGAGCAGCATCGTCACCCCCGAGGAGCAGGAGTTTGTCAACAGTGAGTGCGGCGGGG 794728374 197268 NM_000238.3(KCNH2):c.1675C>T (p.Leu559Phe) KCNH2 Feb 05, 2014 MedGen:CN517202 not provided germline 7 150951718 GTGCTGTTCTTGCTCATGTGCACCTTTGCGCTCATCGCGCACTGGCTAGCCTGCATCTGGT 587783988 168316 NM_133433.3(NIPBL):c.598C>T (p.Gln200Ter) NIPBL Oct 16, 2013 MedGen:CN029798,OMIM:122470 Cornelia de Lange syndrome 1 germline 5 36962262 TCCCATCCTTCAAGTTACACAACACATCCACAGATGCAACAAGGTAAGAAAGTTGTTTGTA 121908334 19767 NM_001080114.1(LDB3):c.494C>T (p.Ala165Val) LDB3 May 10, 2017 Human Phenotype Ontology:HP:0003715,MedGen:C2678065,Orphanet:ORPHA593,SNOMED CT:699269005;MedGen:C1836155,OMIM:609452,Orphanet:ORPHA98912;EFO:EFO_0000407,Human Phenotype Ontology:HP:0001644,MedGen:C0007193,Orphanet:ORPHA217604,SNOMED CT:195021004;MedGen:CN517202 Myofibrillar myopathy;Myofibrillar myopathy, ZASP-related;Primary dilated cardiomyopathy;not provided germline;unknown 10 86687218 ACACGCCCATCAGCATGTATTCCCAGGATGCCATCATGGATGCCATCGCTGGGCAGGCCCA 121912625 18624 NM_017662.4(TRPM6):c.422C>T (p.Ser141Leu) TRPM6 Mar 02, 2004 MedGen:C1865974,OMIM:602014,Orphanet:ORPHA30924 Hypomagnesemia 1, intestinal germline 9 74840146 GGAAAATGGAACTGCCCAAGCTTGTGATCTCAGTCCATGGGGGCATCCAGAACTTTACTAT 397515433 48575 NM_001165899.1(PDE4D):c.728C>T (p.Ala243Val) PDE4D Feb 20, 2013 MedGen:C3553250,OMIM:614613 Acrodysostosis 2, with or without hormone resistance germline 5 59038869 TACAGACCAGGCACTCCGTCAGTGAGATGGCCTCCAACAAGGTAAGCCCCGGTTCTGCTGT 886041382 265026 NM_007075.3(WDR45):c.19C>T (p.Arg7Ter) WDR45 Jul 05, 2016 MedGen:CN517202 not provided germline X 49078077 CAATCCTGCACCATGACTCAACAGCCACTTCGAGGAGTGACCAGCCTGCGTTTCAACCAAG 727503968 177349 NM_001023570.3(IQCB1):c.1090C>T (p.Arg364Ter) IQCB1 Feb 05, 2014 MedGen:C1836517,OMIM:609254 Senior-Loken syndrome 5 germline 3 121790112 CTTCAAAGACAGAGAGCCATGAGACTTTCCCGAGAATTGCAGCTGAGTATGCTCGAAATAG 606231229 39397 NM_005135.2(SLC12A6):c.3247C>T (p.Arg1083Ter) SLC12A6 Aug 12, 2011 MedGen:C0795950,OMIM:218000,Orphanet:ORPHA1496 Andermann syndrome germline 15 34233934 TTCCTAGAGGTGCTTACCGAGGGACTAGAGCGAGTCCTACTTGTCCGGGGTGGTGGCAGTG 690016562 171835 NM_005211.3(CSF1R):c.2467C>T CSF1R Dec 18, 2014 Gene:8156,MedGen:C1857300,OMIM:221820 Hereditary diffuse leukoencephalopathy with spheroids germline 5 150056112 CCCAGGCCCGCCTGCCTGTGAAGTGGATGGCCCCAGAGAGCATCTTTGACTGTGTCTACAC 863224986 213874 NM_004006.2(DMD):c.2407C>T (p.Gln803Ter) DMD Feb 15, 2017 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Duchenne muscular dystrophy germline X 32491492 CTAGAGGGTGTTAATGCAGATAGCATCAAACAAGCCTCAGAACAACTGAACAGCCGGTGGA 387907236 44229 NM_032861.3(SERAC1):c.442C>T (p.Arg148Ter) SERAC1 Nov 14, 2016 MedGen:C3553597,OMIM:614739,Orphanet:ORPHA352328;MedGen:CN517202 3-methylglutaconic aciduria with deafness, encephalopathy, and Leigh-like syndrome;not provided germline 6 158146827 CGGAAGAGCAAGTCAGATGACAAAACCACGCGACTCGAGGCTGTGCGGGAAATGTCGGAGA 121909103 22311 NM_005603.4(ATP8B1):c.2599C>T (p.Arg867Cys) ATP8B1 Jun 01, 2005 MedGen:C0268318,OMIM:147480,SNOMED CT:235888006 Cholestasis of pregnancy germline 18 57661282 GCCTGCGAGTGCAGCGCAGTCATCTGCTGCCGCGTCACCCCCAAGCAGAAGGCCATGGTGG 1064794568 408690 NM_006009.3(TUBA1A):c.190C>T (p.Arg64Trp) TUBA1A Feb 21, 2017 MedGen:CN517202 not provided germline 12 49186647 AGTGAGACGGGGGCTGGCAAGCATGTGCCCCGGGCAGTGTTTGTAGACTTGGAACCCACAG 1057518195 359329 NM_001256850.1(TTN):c.95902C>T (p.Arg31968Ter) TTN Nov 01, 2016 MedGen:CN517202 not provided germline 2 178535790 CTTGAAGGCATGGGAGCAGTTCATGCTCTCCGAGGTGAAGTGGTCAGCATCAAGATTCCTT 11549190 38541 NM_001614.3(ACTG1):c.404C>T (p.Ala135Val) ACTG1 Sep 17, 2015 MedGen:C3281235,OMIM:614583;MedGen:CN517202 Baraitser-Winter Syndrome 2;not provided germline 17 81511586 AGACCTTCAACACCCCGGCCATGTACGTGGCCATCCAGGCCGTGCTGTCCCTCTACGCCTC 587777050 76963 NM_003868.2(FGF16):c.535C>T (p.Arg179Ter) FGF16 Sep 01, 2013 MedGen:C1839728,OMIM:309630,Orphanet:ORPHA2498 Metacarpal 4-5 fusion germline X 77456433 GGCTCACCCCGGGAGGGATACAGGACTAAACGACACCAGAAATTCACTCACTTTTTACCCA 794729285 199026 NM_001256850.1(TTN):c.69415C>T (p.Arg23139Ter) TTN Feb 28, 2017 MedGen:C1858763,OMIM:604145;EFO:EFO_0000407,Human Phenotype Ontology:HP:0001644,MedGen:C0007193,Orphanet:ORPHA217604,SNOMED CT:195021004;MedGen:CN517202 Dilated cardiomyopathy 1G;Primary dilated cardiomyopathy;not provided germline 2 178571794 AATTCACTACTGACAATAAAGGACGCCTGCCGAGAAGATGTTGGCCATTATGTGGTTAAAC 148932047 237149 NM_007055.3(POLR3A):c.2617C>T (p.Arg873Ter) POLR3A Jan 08, 2016 MedGen:CN517202 not provided germline 10 77993367 CAGCTGAGCTTTTTCCTCCTTTTCCTTTAGCGAAGGCTTGTCAAATCTCTTGAAGATCTTT 121909587 32089 NM_001735.2(C5):c.55C>T (p.Gln19Ter) C5 May 15, 1995 MedGen:C0343047,OMIM:609536 Leiner disease germline 9 121050192 TTTTTAATCTTCCTGGGGAAAACCTGGGGACAGGAGCAAACGTAAGTAAAACAAGCTATCT 587777458 143125 NM_001242896.1(DEPDC5):c.3259C>T (p.Arg1087Ter) DEPDC5 Apr 13, 2016 Gene:50987,MedGen:C1858477,OMIM:604364 Epilepsy, familial focal, with variable foci 1 germline 22 31857548 GCCATGACTCCCACCTACATGGACAGCCCACGAAAGGTAAAGGAAGCCGCGGTAGCAGGGA 121913333 212414 NM_000038.5(APC):c.2626C>T (p.Arg876Ter) APC Jun 19, 2017 MeSH:D015179,MedGen:CN236642;MedGen:CN240755;MedGen:C2713442,OMIM:175100;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Colorectal Neoplasms;Familial adenomatous polyposis;Familial adenomatous polyposis 1;Hereditary cancer-predisposing syndrome;not provided germline;somatic 5 112838220 GCAACAGAAAATCCAGGAACTTCTTCAAAGCGAGGTTTGCAGATCTCCACCACTGCAGCCC 121912812 32559 NM_000781.2(CYP11A1):c.1076C>T (p.Ala359Val) CYP11A1 Aug 01, 2006 MedGen:C3151055,OMIM:613743,Orphanet:ORPHA168558 Adrenal insufficiency, congenital, with 46,XY sex reversal, partial or complete germline 15 74339668 AGGATATGCTGCGGGCAGAGGTCTTGGCTGCGCGGCACCAGGCCCAGGGAGACATGGCCAC 281875228 39301 NM_003072.3(SMARCA4):c.2761C>T (p.Leu921Phe) SMARCA4 Mar 18, 2012 MedGen:C3553249,OMIM:614609;MedGen:CN517202 Mental retardation, autosomal dominant 16;not provided germline 19 11021869 GGCACACCGCTGCAGAACAAGCTTCCCGAGCTCTGGGCGCTGCTCAACTTCCTGCTGCCCA 137854529 17205 NM_213599.2(ANO5):c.2272C>T (p.Arg758Cys) ANO5 Jun 17, 2016 MedGen:C1969785,OMIM:611307,Orphanet:ORPHA206549;MedGen:C2750076,OMIM:613319,Orphanet:ORPHA399096;MedGen:CN517202 Limb-girdle muscular dystrophy, type 2L;Miyoshi muscular dystrophy 3;not provided germline;unknown 11 22274605 ATTGTTGCATTTACGTCAGACATCATTCCCCGTCTAGTTTACTACTATGCTTACTCAACAA -1 439879 NM_000238.3(KCNH2):c.3202C>T (p.Gln1068Ter) KCNH2 Jul 04, 2017 MedGen:C3150943,OMIM:613688 Long QT syndrome 2 unknown 7 150947005 GCAGACATGGCCACTGTCCTGCAGCTGCTACAGAGGCAGATGACGCTGGTCCCGCCCGCCT 794727499 193533 NM_004006.2(DMD):c.133C>T (p.Gln45Ter) DMD Jul 30, 2014 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Becker muscular dystrophy;Duchenne muscular dystrophy germline X 32849781 CAGCATATTGAGAACCTCTTCAGTGACCTACAGGATGGGAGGCGCCTCCTAGACCTCCTCG 374661051 50318 NM_003366.3(UQCRC2):c.547C>T (p.Arg183Trp) UQCRC2 Apr 08, 2013 MedGen:C3554608,OMIM:615160 Mitochondrial complex III deficiency, nuclear type 5 germline 16 21965440 GTCATTGAAAATTTGCATGCAGCAGCTTACCGGAATGCCTTGGCTAATCCCTTGTATTGTC 774801990 445001 NM_152641.3(ARID2):c.5305C>T (p.Arg1769Ter) ARID2 Sep 18, 2017 MedGen:CN517202 not provided germline 12 45893663 GAAAAAGAGGGACCAATAACTAAACACATCCGACTAACAGCTGCCTTAATATTAAAAAATA 121908364 19862 NM_000441.1(SLC26A4):c.1115C>T (p.Ala372Val) SLC26A4 Jul 01, 2017 Human Phenotype Ontology:HP:0011387,MedGen:C1863752,OMIM:600791 Enlarged vestibular aqueduct germline 7 107689166 CTATTGCAGTGTCAGTAGGAAAAGTATATGCCACCAAGTATGATTACACCATCGATGGGAA 137853042 21906 NM_004646.3(NPHS1):c.3325C>T (p.Arg1109Ter) NPHS1 Oct 31, 2016 MedGen:C0403399,OMIM:256300,Orphanet:ORPHA839,SNOMED CT:197601003 Finnish congenital nephrotic syndrome germline;unknown 19 35831358 CACCTTCATCCTGGAAGGTCGGAAGAGGACCGAGTCAGGAACGAATATGAGGAGAGCCAGT 762428889 260185 NM_000088.3(COL1A1):c.1405C>T (p.Arg469Ter) COL1A1 Jan 13, 2016 MedGen:CN517202 not provided germline 17 50194777 CCCCCTGGCCCTGCTGGAGAGGAAGGAAAGCGAGGAGCTCGAGGTGAACCCGGACCCACTG 397515623 79349 NM_000394.3(CRYAA):c.160C>T (p.Arg54Cys) CRYAA Mar 10, 2017 MedGen:C1858679,OMIM:604219;Human Phenotype Ontology:HP:0000519,MedGen:C1842324 Cataract, autosomal dominant;Congenital cataract germline;inherited 21 43169259 ATCAGCCCCTACTACCGCCAGTCCCTCTTCCGCACCGTGCTGGACTCCGGCATCTCTGAGG 875989893 228124 NM_000527.4(LDLR):c.253C>T (p.Gln85Ter) LDLR Dec 16, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11102726 TGTGGGGGCCGTGTCAACCGCTGCATTCCTCAGTTCTGGAGGTGCGATGGCCAAGTGGACT 28933374 28752 NM_001083116.2(PRF1):c.1034C>T (p.Pro345Leu) PRF1 Dec 03, 1999 MedGen:C1863727,OMIM:603553 Hemophagocytic lymphohistiocytosis, familial, 2 germline 10 70598687 GCCCTGGCCTGGTGGACTACACCCTGGAACCCCTGCACGTGCTGCTGGACAGCCAGGACCC 878854491 238792 NM_002354.2(EPCAM):c.523C>T (p.Gln175Ter) EPCAM Jan 23, 2016 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Lynch syndrome germline 2 47377045 GCACTTCAGAAGGAGATCACAACGCGTTATCAACTGGATCCAAAATTTATCACGAGTATTT 587784321 169727 NM_006031.5(PCNT):c.8917C>T (p.Arg2973Ter) PCNT Sep 09, 2013 MedGen:C0432246,OMIM:210720,Orphanet:ORPHA2637 Microcephalic osteodysplastic primordial dwarfism type 2 germline 21 46436069 TCGGATGCGGACCACCTCCGGGAACAGCAGCGAGAGCTGGAGGCGATGAGGCAGCGGCTGC 886037961 248900 NM_001077350.2(NPRL3):c.1270C>T (p.Arg424Ter) NPRL3 Sep 21, 2016 MedGen:C4310708,OMIM:617118 Epilepsy, familial focal, with variable foci 3 germline 16 89794 GCCTCACCCAGCGAGGAGGAGCCCCGTCCGCGAGAGGACGACGTCCCCTTCACTGCCCGGG 122460159 26541 NM_003159.2(CDKL5):c.119C>T (p.Ala40Val) CDKL5 Mar 13, 2014 MedGen:C2748910,Orphanet:ORPHA3095;MedGen:C1839333,OMIM:300672 Atypical Rett syndrome;Early infantile epileptic encephalopathy 2 de novo;germline;unknown X 18564496 TTCCCTTGCAGGAAACACATGAAATTGTGGCGATCAAGAAATTCAAGGACAGTGAAGGTAG 74315296 23998 NM_000098.2(CPT2):c.1507C>T (p.Arg503Cys) CPT2 May 15, 2014 MedGen:C0342790,Orphanet:ORPHA157,SNOMED CT:238002005;MedGen:C1833508,OMIM:255110,Orphanet:ORPHA228302 Carnitine palmitoyltransferase II deficiency;Carnitine palmitoyltransferase II deficiency, myopathic, stress-induced germline 1 53211181 GCATTCAAGCACGGCCGCACTGAGACCATCCGCCCGGCCTCCGTCTATACAAAGAGGTGCT 118203727 58153 NM_000368.4(TSC1):c.2689C>T (p.Gln897Ter) TSC1 Dec 09, 2015 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Tuberous sclerosis syndrome;not provided germline 9 132897547 GAGCTAGAAAAAAACAGAAGCCATGTTCTCCAGCAGACTCAGAGGCTTGATACCTCCCAAA 397514534 48164 NM_018706.6(DHTKD1):c.1228C>T (p.Arg410Ter) DHTKD1 Dec 07, 2012 MedGen:C1859817,OMIM:204750,Orphanet:ORPHA79154 2-aminoadipic 2-oxoadipic aciduria germline 10 12094141 GACAGCCCAGAGGAAGTGGTCCGTGCCACACGACTGGCTTTTGAATACCAACGCCAGTTCC 61750117 15324 NM_000552.4(VWF):c.4789C>T (p.Arg1597Trp) VWF May 01, 2010 MedGen:CN517202;MedGen:C1282968,Orphanet:ORPHA166084 not provided;von Willebrand disease, type 2a germline 12 6018629 GACCACAGCTTCTTGGTCAGCCAGGGTGACCGGGAGCAGGCGCCCAACCTGGTCTACATGG 749742837 209042 NM_003688.3(CASK):c.2377C>T (p.Gln793Ter) CASK Jul 23, 2015 MedGen:C1283400,OMIM:177400,Orphanet:ORPHA132,SNOMED CT:360589003;MedGen:C2677903,OMIM:300749,Orphanet:ORPHA163937 Deficiency of butyrylcholine esterase;Mental retardation and microcephaly with pontine and cerebellar hypoplasia germline;unknown X 41531135 TATTACTTTGTATCTCATGACCAAATGATGCAAGACATCTCTAATAACGAGTACTTGGAGT 367576664 171850 NM_001563.3(IMPG1):c.1519C>T (p.Arg507Ter) IMPG1 Dec 30, 2014 MedGen:C4015342,OMIM:616151 Macular dystrophy, vitelliform, 4 germline 6 75950867 TCACATCCACCTGCATCTTCAGATGACAGCCGATCAAGTGCAGGTGGCGAAGATATGGTCA 794727113 191480 NM_000018.3(ACADVL):c.1357C>T (p.Arg453Ter) ACADVL Jul 12, 2016 MedGen:C3887523,OMIM:201475,Orphanet:ORPHA26793,SNOMED CT:237996001,SNOMED CT:237997005 Very long chain acyl-CoA dehydrogenase deficiency germline;unknown 17 7223992 TGCTAGGAACCTGGAGTAGAGCGTGTGCTCCGAGATCTTCGCATCTTCCGGATCTTTGAGG 28940289 17356 NM_014297.4(ETHE1):c.487C>T (p.Arg163Trp) ETHE1 Feb 01, 2004 MedGen:C1865349,OMIM:602473,Orphanet:ORPHA51188 Ethylmalonic encephalopathy germline 19 43511455 GGAGATGCCCTGTTGATCCGTGGGTGTGGGCGGACAGACTTCCAGCAAGGTGACCAGCTCC 267606829 15044 NM_017547.3(FOXRED1):c.694C>T (p.Gln232Ter) FOXRED1 Dec 07, 2017 MedGen:C1838979,OMIM:252010;MedGen:CN517202 Mitochondrial complex I deficiency;not provided germline 11 126275389 TGTCTGCTCCAGGGGCTTCGGCGAAAGGTCCAGTCCTTGGGAGTCCTTTTCTGCCAGGGAG 63750019 95033 NM_000179.2(MSH6):c.718C>T (p.Arg240Ter) MSH6 Dec 02, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Hereditary cancer-predisposing syndrome;Lynch syndrome germline 2 47798701 GAAGTACAGCCTAAGACACAAGGATCTAGGCGAAGTAGCCGCCAAATAAAAAAACGAAGGG 397515415 48309 NM_018486.2(HDAC8):c.490C>T (p.Arg164Ter) HDAC8 Mar 09, 2017 MedGen:C3550903,OMIM:300882;MedGen:CN517202 Cornelia de Lange syndrome 5;not provided de novo;germline;unknown X 72495216 TATCTCAATGATGCTGTCCTGGGAATATTACGATTGCGACGGAAATTTGAGCGTATTCTCT 137852239 25628 NM_000133.3(F9):c.655C>T (p.Gln219Ter) F9 Sep 01, 1989 MedGen:C0008533,OMIM:306900,Orphanet:ORPHA98879,SNOMED CT:41788008 Hereditary factor IX deficiency disease germline X 139551196 ACCATTTTGGATAACATCACTCAAAGCACCCAATCATTTAATGACTTCACTCGGGTTGTTG -1 482241 NM_000425.4(L1CAM):c.1672C>T (p.Arg558Ter) L1CAM Oct 31, 2017 MedGen:CN517202 not provided germline X 153868333 CAGCCCAGCATCACCTGGCGTGGGGACGGTCGAGACCTCCAGGAGCTTGGGGACAGTGACA 104893793 404762 NM_000539.3(RHO):c.491C>T (p.Ala164Val) RHO Sep 30, 2015 MedGen:C1864869,OMIM:610445 Congenital stationary night blindness, autosomal dominant 1 maternal 3 129531005 TCATGGGCGTTGCCTTCACCTGGGTCATGGCGCTGGCCTGCGCCGCACCCCCACTCGCCGG 780594709 214090 NM_002180.2(IGHMBP2):c.1478C>T (p.Thr493Ile) IGHMBP2 Oct 05, 2017 MedGen:C4015349,OMIM:616155,Orphanet:ORPHA443073;MedGen:C1858517,OMIM:604320,Orphanet:ORPHA98920;MedGen:CN517202 Charcot-Marie-Tooth disease, axonal, type 2S;Spinal muscular atrophy, distal, autosomal recessive, 1;not provided germline 11 68933854 AGACGGGTGTGCCCCTGCTCTTGGTGGACACCGCCGGCTGCGGGCTGTTTGAGCTGGAGGA 370324188 396812 NM_000553.4(WRN):c.673C>T (p.Arg225Ter) WRN Sep 27, 2016 MedGen:C0043119,OMIM:277700,Orphanet:ORPHA902,SNOMED CT:51626007 Werner syndrome germline 8 31068276 GTTTTTTTATAGGCTGGTTTTATTATTTACCGAAATTTAGAGATTTTGGATGATACTGTGC 745688776 264516 NM_002336.2(LRP6):c.2953C>T (p.Arg985Ter) LRP6 Apr 11, 2016 MedGen:CN517202 not provided germline 12 12150877 CTGGACAAGCAACTCTATTGGATTGACTCACGACAAAACATGATCCGAAAGGCACAAGAAG 61762293 21352 NM_001022.3(RPS19):c.280C>T (p.Arg94Ter) RPS19 Jun 14, 2016 MedGen:C2676137,OMIM:105650;MedGen:CN517202 Diamond-Blackfan anemia 1;not provided germline 19 41869138 AGAAACGGCGTCATGCCCAGCCACTTCAGCCGAGGCTCCAAGAGTGTGGCCCGCCGGGTCC 200972952 360824 NM_002977.3(SCN9A):c.377+5C>T SCN9A Apr 21, 2015 Human Phenotype Ontology:HP:0007021,MedGen:C0344307 Pain insensitivity unknown 2 166306951 ATATCTATTAAGATTTTAGTACACTCATATCCTTTTAAAAATGATTACATCCAGTGGCACT 119103265 17317 NM_014874.3(MFN2):c.1090C>T (p.Arg364Trp) MFN2 Aug 04, 2017 MedGen:CN043576;MedGen:C1836485,OMIM:609260,Orphanet:ORPHA99947;MedGen:C0393807,OMIM:601152,Orphanet:ORPHA90120,SNOMED CT:128203003;MedGen:CN517202 Charcot-Marie-Tooth disease, type 2;Charcot-Marie-Tooth disease, type 2A2A;Hereditary motor and sensory neuropathy with optic atrophy;not provided germline 1 12002033 GTGAAGACCAAGTTTGAGCAGCACACGGTCCGGGCCAAGCAGATTGCAGAGGCGGTTCGAC 587776916 45805 NM_001025295.2(IFITM5):c.-14C>T IFITM5 Mar 01, 2015 MedGen:C1970414,OMIM:610967,Orphanet:ORPHA216828 Osteogenesis imperfecta type 5 germline 11 299504 CTCCCAGCACCAGTCTGAGTGTGGAAGAGACGGCGCTGGAACCCATGGACACGGCGTATCC 1064793877 411157 NM_000033.3(ABCD1):c.1895C>T (p.Thr632Ile) ABCD1 Mar 02, 2016 MedGen:CN517202 not provided germline X 153743250 GGCCCAAGTACGCCCTCCTGGATGAATGCACCAGCGCCGTGAGCATCGACGTGGAAGGCAA 28999111 33354 NM_001614.3(ACTG1):c.266C>T (p.Thr89Ile) ACTG1 Nov 01, 2003 MedGen:C1858172,OMIM:604717 Deafness, autosomal dominant 20 germline 17 81512000 GGGACGACATGGAGAAGATCTGGCACCACACCTTCTACAACGAGCTGCGCGTGGCCCCGGA 1057524915 380287 NM_031844.2(HNRNPU):c.511C>T (p.Gln171Ter) HNRNPU Mar 10, 2017 MedGen:CN240910,OMIM:617391 Epileptic encephalopathy, early infantile, 54 germline 1 244863797 CAGCAGCCTCAACCGCCGGCGACGCAGCAGCAACAGCCCCAACAGCAGCGCGGGGCCGCCA 1131691104 420792 NM_001042492.2(NF1):c.3097C>T (p.Gln1033Ter) NF1 Feb 06, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 17 31230366 ATGGCAAGGAGAGATGACCTCTCATTTTGCCAAGAGATGAAATTTAGGTGAGTTCTCAAAA 1114167288 243978 NM_014362.3(HIBCH):c.410C>T (p.Ala137Val) HIBCH Jan 10, 2016 MedGen:C0342738,OMIM:250620,Orphanet:ORPHA88639,SNOMED CT:237958002 Beta-hydroxyisobutyryl-CoA deacylase deficiency inherited 2 190287614 TTTCAGGTTCTTGCCAGAAACCTTATGTTGCACTTATTCATGGAATTACAATGGGTGGGGT -1 247398 NM_001904.3(CTNNB1):c.268C>T (p.Arg90Ter) CTNNB1 Apr 27, 2016 MedGen:C3554449,OMIM:615075,Orphanet:ORPHA404473 Mental retardation, autosomal dominant 19 de novo 3 41224980 CCAGATATTGATGGACAGTATGCAATGACTCGAGCTCAGAGGGTACGAGCTGCTATGTTCC 121918791 79533 NM_006920.4(SCN1A):c.4909C>T (p.Arg1637Cys) SCN1A Nov 25, 2014 MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002 Severe myoclonic epilepsy in infancy germline 2 165992333 ATCCGTCTTGCTAGGATTGGCCGAATCCTACGTCTGATCAAAGGAGCAAAGGGGATCCGCA 121908568 20920 NM_004655.3(AXIN2):c.1966C>T (p.Arg656Ter) AXIN2 May 01, 2004 MedGen:C1837750,OMIM:608615,Orphanet:ORPHA300576 Oligodontia-colorectal cancer syndrome germline 17 65536495 TTGGAGTCTGCCCGCTCGTCTCCAGGCGAACGAGCCAGCCGGCACCATCTGTGGGGGGGCA 730880637 179333 NM_000256.3(MYBPC3):c.1201C>T (p.Gln401Ter) MYBPC3 Feb 14, 2013 MedGen:CN517202 not provided germline 11 47343514 GACGCTGAGGTCAAATGGCTCAAGAATGGCCAGGAGATCCAGATGAGCGGCAGGTGCAGCC 199632531 211211 NM_032861.3(SERAC1):c.1126C>T (p.Gln376Ter) SERAC1 May 03, 2016 MedGen:CN517202 not provided germline 6 158120465 CTAGACCGAGAAACTGTGCAAGAAAAATATCAGGATGGCGTATATGTGCTGCATCCCCAAT 62635763 48317 NM_001927.3(DES):c.1255C>T (p.Pro419Ser) DES Mar 07, 2016 MedGen:C1832370,OMIM:601419,Orphanet:ORPHA98909;MedGen:CN517202 Myofibrillar myopathy 1;not provided germline 2 219423787 TTTTGTCTCTTCCCTTTTAGGATCAATCTCCCCATCCAGACCTACTCTGCCCTCAACTTCC 796051892 199936 NM_145207.2(SPATA5):c.2531C>T (p.Ala844Val) SPATA5 Sep 03, 2015 MedGen:C4225276,OMIM:616577,Orphanet:ORPHA457351 Epilepsy, hearing loss, and mental retardation syndrome germline 4 123313913 TTCAGATTGTAGCTGTCTGCAGAGAGGCAGCTCTTCTGGCTCTGGAAGAAGACATTCAAGC 267608561 153499 NM_003159.2(CDKL5):c.1039C>T (p.Gln347Ter) CDKL5 Mar 13, 2014 MedGen:C1839333,OMIM:300672 Early infantile epileptic encephalopathy 2 unknown X 18603963 TCTCACCACAGATCTAACAGCAAGGACATCCAGAACCTGAGTGTAGGCCTGCCCCGGGCTG 886038870 258820 NM_000138.4(FBN1):c.7939C>T (p.Gln2647Ter) FBN1 May 28, 2013 MedGen:CN118826,Orphanet:ORPHA91387 Thoracic aortic aneurysm and aortic dissection germline 15 48415648 TTCCAGTATGAACAGTTCAGTGGAGGATGCCAAGACATCAATGAATGTGGCTCTGCGCAGG 587777484 143181 NM_033407.3(DOCK7):c.3616C>T (p.Arg1206Ter) DOCK7 Jun 05, 2014 MedGen:C4014492,OMIM:615859,Orphanet:ORPHA411986 Epileptic encephalopathy, early infantile, 23 germline 1 62529349 CCGCGGTACTCTGACCCTCAGATAAAGGCTCGAGTGGCCATGTTGTATCTACCTCTGATTG 104894733 26179 NM_182680.1(AMELX):c.152C>T (p.Thr51Ile) AMELX Apr 01, 2002 MedGen:C1845052,OMIM:301200 Amelogenesis imperfecta, type 1E germline X 11298243 TTCTAATATCTTTTTCTCTTAAGGTGCTTACCCCTTTGAAGTGGTACCAGAGCATAAGGCC 797044969 204598 NM_004700.3(KCNQ4):c.871C>T (p.Pro291Ser) KCNQ4 Aug 20, 2015 MedGen:C2677637,OMIM:600101 DFNA 2 Nonsyndromic Hearing Loss germline 1 40819911 TTGACAACCATCGGCTATGGTGACAAGACACCGCACACATGGCTGGGCAGGGTCCTGGCTG 587777065 94233 NM_018051.4(WDR60):c.2246C>T (p.Thr749Met) WDR60 Sep 05, 2013 MedGen:C3809691,OMIM:615503 Short-rib thoracic dysplasia 8 with or without polydactyly germline 7 158923722 GCGATGGCTTCTGGACGTTCCGGACCGCCACGTTTTCCACCGGTCAGTGTCATCTGCCTGC 118204439 15743 NM_000512.4(GALNS):c.1417C>T (p.Gln473Ter) GALNS Jan 01, 1995 MedGen:C0086651,OMIM:253000,Orphanet:ORPHA309297,SNOMED CT:7259005 Mucopolysaccharidosis, MPS-IV-A germline 16 88818072 GAGGCCCTCAGCAGGATCACCTCGGTCGTCCAGCAGCACCAGGAGGCCTTGGTCCCCGCGC 75326924 28574 NM_001001547.2(CD36):c.268C>T (p.Pro90Ser) CD36 Jun 14, 2016 MedGen:C1842090,OMIM:608404 Platelet glycoprotein IV deficiency germline 7 80656687 AGCAGCAACATTCAAGTTAAGCAAAGAGGTCCTTATACGTACAGGTGAGTGAGTCCCCACA 72559718 441406 NM_000352.4(ABCC8):c.4157C>T (p.Ser1386Phe) ABCC8 Sep 01, 2016 MedGen:CN517202 not provided germline 11 17395893 TCTGCGGCCGCACCGGCAGTGGGAAGTCCTCCTTCTCTCTTGCCTTCTTCCGCATGGTGGA 587777249 125921 NM_001130145.2(YAP1):c.370C>T (p.Arg124Ter) YAP1 Feb 06, 2014 Human Phenotype Ontology:HP:0000589,MedGen:C0009363,OMIM:120200,Orphanet:ORPHA194,SNOMED CT:92828000,SNOMED CT:93390002 Congenital ocular coloboma germline 11 102114192 ACTGCAGGAGCCCTGACTCCACAGCATGTTCGAGCTCATTCCTCTCCAGCTTCTCTGCAGT 397514688 59368 NM_000789.3(ACE):c.1486C>T (p.Arg496Ter) ACE Apr 13, 2016 Human Phenotype Ontology:HP:0008660,MedGen:C0266313,OMIM:267430,SNOMED CT:204949001;MedGen:CN517202 Renal dysplasia;not provided germline 17 63483172 TCCCGCTACAACTTCGACTGGTGGTATCTTCGGTGAGAGGAGGGATAGAAAAGCCTTCGCC 199472755 67819 NM_000218.2(KCNQ1):c.965C>T (p.Thr322Met) KCNQ1 Jun 12, 2017 MedGen:CN230736;MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MeSH:D008133,MedGen:C0023976,SNOMED CT:9651007;MedGen:CN517202 Cardiovascular phenotype;Congenital long QT syndrome;Long QT syndrome;not provided germline 11 2583478 CCATCGGCTATGGGGACAAGGTGCCCCAGACGTGGGTCGGGAAGACCATCGCCTCCTGCTT 80359112 67292 NM_000059.3(BRCA2):c.8572C>T (p.Gln2858Ter) BRCA2 Sep 08, 2016 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome germline 13 32371040 GAAAAGGAAGCAGCAAAATATGTGGAGGCCCAACAAAAGAGACTAGAAGCCTTATTCACTA 1057520542 372576 NM_020661.3(AICDA):c.334C>T (p.Arg112Cys) AICDA Mar 05, 2015 MedGen:CN517202 not provided germline 12 8605308 CCCAACCTCAGTCTGAGGATCTTCACCGCGCGCCTCTACTTCTGTGAGGACCGCAAGGCTG -1 482013 NM_000545.6(HNF1A):c.1489C>T (p.Gln497Ter) HNF1A Jan 08, 2018 MedGen:CN517202 not provided germline 12 120997653 AGCCCCTTCATGGCCACCATGGCTCAGCTGCAGAGCCCCCACGGTGAGCGCCCTGTGCCCC 121918390 32934 NM_000384.2(APOB):c.7564C>T (p.Arg2522Ter) APOB Aug 01, 1992 MedGen:C1862596,Orphanet:ORPHA426,SNOMED CT:60193003 Familial hypobetalipoproteinemia germline 2 21009304 TTCCGAGAGACCCTAGAAGATACACGAGACCGAATGTATCAAATGGACATTCAGCAGGAAC 886042633 267703 NM_003494.3(DYSF):c.1708C>T (p.Gln570Ter) DYSF Sep 22, 2015 MedGen:C1850889,OMIM:253601,Orphanet:ORPHA268;MedGen:C1850808,OMIM:254130,Orphanet:ORPHA45448 Limb-girdle muscular dystrophy, type 2B;Miyoshi muscular dystrophy 1 germline 2 71551676 CTGGAGACCAAGCTGGTGGAGCACAGTGAACAGAAGGTGGAGGACCTTCCTGCGGATGACA 1064793157 409140 NM_001244189.1(KIAA0586):c.2512C>T (p.Arg838Ter) KIAA0586 Mar 07, 2017 MedGen:CN517202 not provided germline 14 58467833 ACTGTGACTACTTCTATTCCTCCATCATCTCGAAAAGTAGAAACTGGAGTAAAGAAACCTA 202138550 39953 NM_025099.5(CTC1):c.2959C>T (p.Arg987Trp) CTC1 Jan 25, 2017 MedGen:C2677299,OMIM:612199;MedGen:C0265965,Orphanet:ORPHA1775,SNOMED CT:74911008 Cerebroretinal microangiopathy with calcifications and cysts 1;Dyskeratosis congenita germline 17 8229943 TGCAGATCTCACAATGTTTATTGTTGTTTCCGGTCATCCACTTATGTGCAGGTCCTGAGTT 797044911 205311 NM_002501.3(NFIX):c.361C>T (p.Arg121Cys) NFIX Apr 26, 2013 MeSH:D030342,MedGen:C0950123 Inborn genetic diseases germline 19 13025354 AAGGGCAAGATCCGGCGGATTGACTGCCTGCGCCAGGCTGACAAGGTGTGGCGGCTGGACC 387906991 39695 NM_014874.3(MFN2):c.1085C>T (p.Thr362Met) MFN2 Aug 29, 2016 MedGen:C4310725,OMIM:617087;MedGen:C1836485,OMIM:609260,Orphanet:ORPHA99947 Charcot-Marie-Tooth disease, axonal, autosomal recessive, type 2A2B;Charcot-Marie-Tooth disease, type 2A2A germline 1 12002028 CTGCAGTGAAGACCAAGTTTGAGCAGCACACGGTCCGGGCCAAGCAGATTGCAGAGGCGGT -1 485942 NM_000280.4(PAX6):c.538C>T (p.Gln180Ter) PAX6 Jun 13, 2017 MedGen:C0344542,OMIM:106210 Aniridia 1 unknown 11 31794774 ATTCTTTTTGTTCCAGATGGCTGCCAGCAACAGGAAGGAGGGGGAGAGAATACCAACTCCA 61750130 22943 NM_000350.2(ABCA4):c.4139C>T (p.Pro1380Leu) ABCA4 Mar 08, 2017 na;MedGen:C1855432,OMIM:248400;MeSH:C535804,MedGen:C1855465,OMIM:248200;MedGen:CN517202 MACULAR DEGENERATION, AGE-RELATED, 2, SUSCEPTIBILITY TO;Mandibulofacial dysostosis with mental deficiency;Stargardt disease 1;not provided germline;unknown 1 94031110 CCACGTCTATTCTCCCACAGATCGTGCTCCCGGCTACCTTTGTGTTTTTGGCTCTGATGCT 587783489 169236 NM_004380.2(CREBBP):c.4045C>T (p.Gln1349Ter) CREBBP Feb 08, 2013 MedGen:C0035934,OMIM:180849,Orphanet:ORPHA353277,SNOMED CT:45582004 Rubinstein-Taybi syndrome germline 16 3740487 GAAGACCGAGTGAACAAATTTTTGCGGCGCCAGAATCACCCTGAAGCCGGGGAGGTTTTTG 727503777 178383 NM_005933.3(KMT2A):c.2233C>T (p.Arg745Ter) KMT2A Dec 02, 2014 MedGen:CN029798,OMIM:122470 Cornelia de Lange syndrome 1 de novo 11 118473392 AAAAGGAAAAGAAAAGTGTTTAGTCCTATTCGATCTGAACCAAGATCTCCTTCTCACTCCA 72653705 426898 NM_001171.5(ABCC6):c.3088C>T (p.Arg1030Ter) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16165841 CTCTTCCAGAGGCTCCTGTGGGATGTGGTGCGATCTCCCATCAGCTTCTTTGAGCGGACAC 281860303 46946 NM_005247.2(FGF3):c.283C>T (p.Arg95Trp) FGF3 Feb 07, 2017 MedGen:C1853144,OMIM:610706,Orphanet:ORPHA90024;MedGen:CN517202 Deafness with labyrinthine aplasia microtia and microdontia (LAMM);not provided germline 11 69816361 ATTGTGGCCATCAGGGGTCTCTTCTCCGGGCGGTACCTGGCCATGAACAAGAGGGGACGAC 193922329 44920 NM_000162.3(GCK):c.76C>T (p.Gln26Ter) GCK Jun 14, 2016 MedGen:C1841962,OMIM:125851;MedGen:CN517202 Maturity-onset diabetes of the young, type 2;not provided germline 7 44153433 GTAGAGCAGATCCTGGCAGAGTTCCAGCTGCAGGAGGAGGACCTGAAGAAGGTGATGAGAC -1 463512 NM_000059.3(BRCA2):c.5047C>T (p.Gln1683Ter) BRCA2 Mar 22, 2017 MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009 Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome germline 13 32339402 ACAAGTTGTAGTAGAAAAACTTCTGTGAGTCAGACTTCATTACTTGAAGCAAAAAAATGGC 151340624 26839 NM_001127899.3(CLCN5):c.2320C>T (p.Arg774Ter) CLCN5 Feb 01, 1996 MedGen:C4016445 Nephrolithiasis, X-linked recessive germline X 50090846 ACACCCATGGAGATCGTAGTGGATATTTTCCGAAAGCTGGGACTGCGGCAGTGCCTGGTTA 121917860 21559 NM_007035.3(KERA):c.520C>T (p.Gln174Ter) KERA May 01, 2000 MedGen:C1857574,OMIM:217300 Cornea plana 2 germline 12 91055762 AATCTGGAGAACCTGACCCTTCTTGACCTACAGAACAACAAATTAGTGGACAATGCCTTTC 137852216 25746 NM_152424.3(AMER1):c.1057C>T (p.Arg353Ter) AMER1 Jan 01, 2009 MedGen:C0432268,OMIM:300373,Orphanet:ORPHA2780,SNOMED CT:254129003 Osteopathia striata with cranial sclerosis unknown X 64192230 AGCATGGCCTCTGGGGGCCAGAGAGCAAACCGAGATGGGACCAAGCGAAGTTCCTGCCTGG -1 478856 NM_000267.3(NF1):c.4078C>T (p.Gln1360Ter) NF1 Apr 27, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 17 31249087 ATCATCAGTTCCTCCTCAGAATTCCCCCCTCAACTTCGAAGTGTGTGCCACTGTTTATACC 397514554 48254 NM_001904.3(CTNNB1):c.1543C>T (p.Arg515Ter) CTNNB1 Oct 16, 2017 MedGen:C3554449,OMIM:615075,Orphanet:ORPHA404473;MedGen:CN517202 Mental retardation, autosomal dominant 19;not provided germline 3 41234157 TCTGTTTTTCAGGCTACTGTTGGATTGATTCGAAATCTTGCCCTTTGTCCCGCAAATCATG 74315425 18361 NM_020436.4(SALL4):c.2593C>T (p.Arg865Ter) SALL4 Jan 15, 2015 MedGen:C1623209,OMIM:607323,Orphanet:ORPHA93293 Duane-radial ray syndrome germline 20 51789010 ATGACCCCTTTGTTAGCAGCCCAGCCACGCCGACAGGCCAAGCAACATGGCTGCACACGGT 797045399 209209 NM_000052.6(ATP7A):c.598C>T (p.Gln200Ter) ATP7A Feb 08, 2013 MedGen:C0022716,OMIM:309400,Orphanet:ORPHA565,SNOMED CT:59178007 Menkes kinky-hair syndrome germline X 77988719 GAAGGAAAAATTGGGAAACTGCAAGGTGTTCAGCGAATTAAAGGTAATGTGTCTGGTGTTG 199422305 47724 NM_198253.2(TERT):c.2935C>T (p.Arg979Trp) TERT May 10, 2012 Human Phenotype Ontology:HP:0001915,MedGen:C0002874,OMIM:609135,SNOMED CT:306058006;MedGen:C1851970,OMIM:127550 Aplastic anemia;Dyskeratosis congenita autosomal dominant somatic 5 1260509 AACATGCGTCGCAAACTCTTTGGGGTCTTGCGGCTGAAGTGTCACAGCCTGTTTCTGGATT 199835443 211277 NM_020320.4(RARS2):c.943C>T (p.Arg315Ter) RARS2 Nov 11, 2013 MedGen:CN517202 not provided germline 6 87524588 GGCGACCCCTCCTCAATTTGTACTGTAATGCGAAGTGATGGGACTTCTCTCTATGCAACCA 771004767 359751 NM_033305.2(VPS13A):c.799C>T (p.Arg267Ter) VPS13A Dec 05, 2016 MedGen:CN517202 not provided germline 9 77219998 TCTGCTAATGCCAAACTTGTGATGAATCGCCGATCTGATTTTGACTTTTCTGCCCCCAAAA 5030850 15649 NM_000277.2(PAH):c.781C>T (p.Arg261Ter) PAH May 04, 2017 MedGen:C0031485,OMIM:261600,Orphanet:ORPHA716,SNOMED CT:154735006;MedGen:CN517202 Phenylketonuria;not provided germline;unknown 12 102852876 TCTCGGGATTTCTTGGGTGGCCTGGCCTTCCGAGTCTTCCACTGCACACAGTACATCAGAC 1141814 19360 NM_001005741.2(GBA):c.259C>T (p.Arg87Trp) GBA Nov 10, 2016 MedGen:C0017205,Orphanet:ORPHA355;MedGen:C1961835,OMIM:230800,SNOMED CT:62201009 Gaucher disease;Gaucher's disease, type 1 germline 1 155239934 AGCCGCTATGAGAGTACACGCAGTGGGCGACGGATGGAGCTGAGTATGGGGCCCATCCAGG 111033821 36662 NM_000155.3(GALT):c.1059+56C>T GALT Dec 04, 2012 MedGen:C0268151,OMIM:230400,Orphanet:ORPHA79239,SNOMED CT:124354006 Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase not provided 9 34649620 CTCCAGACTCTCACATGCAGTATGTGCAGGCACCTGATACTTCTGTTGCCCTTGTGCTCCA 201486601 33500 NM_024411.4(PDYN):c.634C>T (p.Arg212Trp) PDYN Nov 12, 2010 MedGen:C1853250,OMIM:610245,Orphanet:ORPHA101108 Spinocerebellar ataxia 23 germline 20 1980454 GACCTGTACAAACGCTATGGGGGCTTCTTGCGGCGCATTCGTCCCAAGCTCAAGTGGGACA 132630271 26158 NM_000377.2(WAS):c.100C>T (p.Arg34Ter) WAS Oct 01, 1995 MedGen:C0043194,OMIM:277970,OMIM:301000,Orphanet:ORPHA906,SNOMED CT:36070007 Wiskott-Aldrich syndrome germline X 48683953 TCCACCCTCCTCCAGGACCACGAGAACCAGCGACTCTTTGAGATGCTTGGACGAAAATGCT 797044933 205223 NM_006922.3(SCN3A):c.1318C>T (p.Gln440Ter) SCN3A Feb 05, 2014 MeSH:D030342,MedGen:C0950123 Inborn genetic diseases germline 2 165154514 CAGAATCAGGCCACCTTGGAAGAAGCAGAACAAAAAGAGGCCGAATTTCAGCAGATGCTCG 119103244 17368 NM_033071.3(SYNE1):c.22918C>T (p.Gln7640Ter) SYNE1 Jan 01, 2007 MedGen:C1853116,OMIM:610743,Orphanet:ORPHA88644 Spinocerebellar ataxia, autosomal recessive 8 germline 6 152201838 CCGGATCACCATGAAGAGCTCCATGCAGAACAAATGCGTTGCAAGGTAAATTACTGAACTG 121908317 19640 NM_020427.2(SLURP1):c.286C>T (p.Arg96Ter) SLURP1 Apr 01, 2001 MedGen:C0025221,OMIM:248300,Orphanet:ORPHA87503,SNOMED CT:239069005 Acroerythrokeratoderma germline 8 142741169 GGGGCCGCCCACCTGATCTTCTGCTGCTTCCGAGACCTCTGCAACTCGGAACTCTGAACCC 727503987 177140 NM_003482.3(KMT2D):c.3754C>T (p.Arg1252Ter) KMT2D Nov 08, 2017 MedGen:CN030661,OMIM:147920 Kabuki syndrome 1 de novo;germline 12 49049834 TTGGGGGTCTCTACGGATGTTAGTCCAGCCCGAGATGAGGGCTCCCTACGGCTCTGTACTG 377767360 36191 NM_005359.5(SMAD4):c.1333C>T (p.Arg445Ter) SMAD4 May 16, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0345893,OMIM:174900,Orphanet:ORPHA329971,SNOMED CT:9273005;MedGen:C1832942,OMIM:175050;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Juvenile polyposis syndrome;Juvenile polyposis/hereditary hemorrhagic telangiectasia syndrome;not provided germline 18 51076662 TAAAAGGTCTTTGATTTGCGTCAGTGTCATCGACAGATGCAGCAGCAGGCGGCTACTGCAC 140602858 34435 NM_018136.4(ASPM):c.3811C>T (p.Arg1271Ter) ASPM Feb 08, 2013 MedGen:C1837501,OMIM:608716 Primary autosomal recessive microcephaly 5 germline 1 197121974 TTGGATCTTCGTAAAGAAATAAGAGCTGCTCGACTCATACAAACAACATGGAGAAAATATA 200164773 457957 NM_000503.5(EYA1):c.229C>T (p.Arg77Ter) EYA1 Jun 13, 2016 MedGen:C0265234,OMIM:113650,Orphanet:ORPHA107,SNOMED CT:290006 Melnick-Fraser syndrome germline 8 71322242 CCAGCAATTGGGAGCAGTAGTTTCAGCCCACGACCAACTCACCAGTTCTCTCCACCACAGA 387906975 39641 NM_017649.4(CNNM2):c.1703C>T (p.Thr568Ile) CNNM2 Mar 11, 2011 MedGen:C3151295,OMIM:613882 Hypomagnesemia 6, renal germline 10 103049788 ATCCATTTTATGAAGTTCTGGGAATCGTCACCTTAGAAGATGTGATTGAAGAAATCATCAA 387907010 39738 NM_013296.4(GPSM2):c.1684C>T (p.Gln562Ter) GPSM2 Jun 08, 2012 MedGen:C1858695,OMIM:604213,Orphanet:ORPHA314597 Chudley-McCullough syndrome germline 1 108924083 GCCAGCTCACAGAGTCGCCGTCTGGATGACCAGAGGGCTAGTTTCAGTAATTTGCCAGGGC 80357131 46031 NM_007294.3(BRCA1):c.2563C>T (p.Gln855Ter) BRCA1 Oct 11, 2016 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome germline 17 43092968 ATAGAAATGGAAGAAAGTGAACTTGATGCTCAGTATTTGCAGAATACATTCAAGGTTTCAA 116840809 28042 NM_000996.2(RPL35A):c.304C>T (p.Arg102Ter) RPL35A Jun 25, 2009 MedGen:C2675859,OMIM:612528 Diamond-Blackfan anemia 5 germline 3 197954142 CTTCCTGCTAAGGCCATTGGACACAGAATCCGAGTGGTGAGTATGGTTTTTAGCAAAATGG 28940287 17442 NM_000048.3(ASL):c.1135C>T (p.Arg379Cys) ASL Mar 30, 2017 MedGen:C0268547,OMIM:207900,Orphanet:ORPHA23,SNOMED CT:41013004;MedGen:CN517202 Argininosuccinate lyase deficiency;not provided germline 7 66092078 CTGGCCACTGACCTTGCCTATTACCTGGTCCGCAAAGGGGTAAGTGTGTAGCAGCCAGGGG 80359212 67494 NM_000059.3(BRCA2):c.9382C>T (p.Arg3128Ter) BRCA2 Aug 16, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;Human Phenotype Ontology:HP:0100013,MeSH:D001943,MedGen:C1458155,Orphanet:ORPHA180250,SNOMED CT:126926005;MedGen:CN517202 Breast-ovarian cancer, familial 2;Familial cancer of breast;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;Neoplasm of the breast;not provided germline;unknown 13 32394814 ATGTTAATTGCTGCAAGCAACCTCCAGTGGCGACCAGAATCCAAATCAGGCCTTCTTACTT 1064794209 408372 NM_000256.3(MYBPC3):c.1621C>T (p.Gln541Ter) MYBPC3 Mar 08, 2017 MedGen:CN517202 not provided germline 11 47342581 GGGGGCCAGGCGCTGGCTGAGCTCATTGTGCAGGGTGAGCCTGGCTGGGGGGGCACATGAG 886038766 258921 NM_000138.4(FBN1):c.526C>T (p.Gln176Ter) FBN1 Feb 01, 2013 MedGen:CN118826,Orphanet:ORPHA91387 Thoracic aortic aneurysm and aortic dissection germline 15 48596295 TGTGCATGCACTTACGGATTTACTGGACCCCAGTGTGAAAGAGGTAATGGTTTTTAAAATC 121908345 19758 NM_015166.3(MLC1):c.274C>T (p.Pro92Ser) MLC1 Jun 14, 2016 MedGen:CN176898;MedGen:C1858854,OMIM:604004,Orphanet:ORPHA2478 Megalencephalic leukoencephalopathy with subcortical cysts;Megalencephalic leukoencephalopathy with subcortical cysts 1 germline;unknown 22 50080391 CATGGGATTCCGGTTTCATTCCAGTGCATCCCCTCGGCAATTGTGAGCTTCACCGTCTCCA 876658868 233027 NM_000038.5(APC):c.1417C>T (p.Gln473Ter) APC Aug 09, 2017 MedGen:C2713442,OMIM:175100;MedGen:C0027672,SNOMED CT:699346009 Familial adenomatous polyposis 1;Hereditary cancer-predisposing syndrome germline 5 112827116 CCTCTTGCCCTTTTTAAATTAGGGGGACTACAGGCCATTGCAGAATTATTGCAAGTGGACT 104894274 15516 NM_000317.2(PTS):c.46C>T (p.Arg16Cys) PTS May 01, 1994 MedGen:CN068421 Hyperphenylalaninemia, bh4-deficient, a, due to partial pts deficiency germline 11 112226489 GGTGGCCGTCGCTGCCAGGCACAAGTGTCCCGCCGCATCTCCTTCAGCGCGAGCCACCGAT 121434526 33315 NM_001613.3(ACTA2):c.445C>T (p.Arg149Cys) ACTA2 Jul 31, 2017 Gene:252843,MedGen:C1846837,OMIM:607087;MedGen:C2673186,OMIM:611788;MedGen:CN118826,Orphanet:ORPHA91387;MedGen:CN517202 Aortic aneurysm, familial thoracic 2;Aortic aneurysm, familial thoracic 6;Thoracic aortic aneurysm and aortic dissection;not provided germline 10 88941794 CAGGCGGTGCTGTCTCTCTATGCCTCTGGACGCACAACTGGTAGGTGGCTGGGCGGGACAG 398122382 75107 NM_001478.4(B4GALNT1):c.682C>T (p.Arg228Ter) B4GALNT1 Jul 11, 2013 MedGen:C1836632,OMIM:609195,Orphanet:ORPHA101006 Spastic paraplegia 26 germline 12 57630182 AGGCAACTACAACTGGTCACTTACAGCAGCCGAAGCTACCAGACCAACACAGCAGACACAG 751298577 205256 NM_014112.4(TRPS1):c.2627C>T (p.Ser876Phe) TRPS1 Feb 05, 2014 MeSH:D030342,MedGen:C0950123 Inborn genetic diseases germline 8 115587074 TGCAGGGGGCGCCAGCTGGCGGAGAGAAGTCTGGGGCCCTCCCCCAGCAGTATCCTGCATC 104894796 26746 NM_004429.4(EFNB1):c.332C>T (p.Thr111Ile) EFNB1 Jun 01, 2004 MedGen:C0220767,OMIM:304110 Craniofrontonasal dysplasia germline X 68838820 GCAATAGGCCAGAGCAGGAAATACGCTTTACCATCAAGTTCCAGGAGTTCAGCCCCAACTA 121434603 28788 NM_000316.2(PTH1R):c.1453C>T (p.Arg485Ter) PTH1R Jan 01, 2005 MedGen:C1838779,OMIM:600002 Eiken skeletal dysplasia germline 3 46903327 AGCCGCTGGACACTGGCACTGGACTTCAAGCGAAAGGCACGCAGCGGGAGCAGCAGCTATA 794727643 194452 NM_012463.3(ATP6V0A2):c.304C>T (p.Gln102Ter) ATP6V0A2 Jul 17, 2014 MedGen:C0268355,OMIM:219200,Orphanet:ORPHA357058,SNOMED CT:73856006 Cutis laxa with osteodystrophy germline 12 123724663 GTAACCATTGTTTTGTTTTAGGAGCAGTTGCAGAAGCTCGAGGTTGAACTGAGAGAAGTCA 879253789 244118 NM_000334.4(SCN4A):c.4360C>T (p.Arg1454Trp) SCN4A Jul 14, 2016 MedGen:C0751882,Orphanet:ORPHA590 Congenital myasthenic syndrome germline 17 63941922 CCCACGCTGTTCCGTGTGATCCGCCTGGCGCGGATTGGGCGTGTCCTGCGGCTGATCCGCG 797044868 205334 NM_003491.3(NAA10):c.247C>T (p.Arg83Cys) NAA10 Aug 04, 2016 MeSH:D030342,MedGen:C0950123;MedGen:C3275447,OMIM:300855,Orphanet:ORPHA276432;MedGen:CN517202 Inborn genetic diseases;N-terminal acetyltransferase deficiency;not provided de novo;germline;inherited X 153932410 TCCCACCAGGCTGTGAAGCGTTCCCACCGGCGCCTCGGTCTGGCTCAGAAACTGATGGACC 1057519291 361793 NM_022089.3(ATP13A2):c.1550C>T (p.Thr517Ile) ATP13A2 Feb 01, 2017 MedGen:C4310662,OMIM:617225 Spastic paraplegia 78, autosomal recessive germline 1 16993828 CCCCACCCACCTGTCTCCCACAGACGGGCACCCTCACTGAGGACGGCTTAGACGTGATGGG 6256 28798 NM_000315.3(PTH):c.247C>T (p.Arg83Ter) PTH Sep 11, 2008 Human Phenotype Ontology:HP:0008200,MedGen:C0221002,SNOMED CT:36348003 Primary hyperparathyroidism germline 11 13492506 GCTCCCAGAGATGCTGGTTCCCAGAGGCCCCGAAAAAAGGAAGACAATGTCTTGGTTGAGA 864309724 215787 NM_004991.3(MECOM):c.2812C>T (p.Arg938Trp) MECOM Dec 03, 2015 MedGen:C4225221,OMIM:616738 Radioulnar synostosis with amegakaryocytic thrombocytopenia 2 germline 3 169100922 AAGATTTTTCCAAGGTCTGCAAACCTAACACGGCACTTGAGAACCCACACAGGAGAGCAGC 886037723 248823 NM_177438.2(DICER1):c.5104C>T (p.Q1702*) DICER1 Jan 12, 2017 MedGen:CN072455,OMIM:601200;MedGen:C0027672,SNOMED CT:699346009 DICER1-related pleuropulmonary blastoma cancer predisposition syndrome;Hereditary cancer-predisposing syndrome germline 14 95094148 GTTCCACTTCGGATCCCCTCAGATTGTTACCAGCGCTTAGAATTCCTGGGAGATGCGATTT 137852862 16890 NM_001193311.1(SUGCT):c.322C>T (p.Arg108Ter) SUGCT Nov 01, 2008 MedGen:C0342873,OMIM:231690,Orphanet:ORPHA35706,SNOMED CT:238070003 Glutaryl-CoA oxidase deficiency germline 7 40188569 ACAGAAAGTACATATTATCTCAGTGTTAACCGAAATAAAAAAGTAAGAATATCATCCCTTT 797046083 207918 NM_000372.4(TYR):c.658C>T (p.Gln220Ter) TYR Jul 27, 2015 MedGen:C0268494,OMIM:203100,Orphanet:ORPHA79431,SNOMED CT:6483008 Tyrosinase-negative oculocutaneous albinism germline 11 89178611 TGGCATAGACTCTTCTTGTTGCGGTGGGAACAAGAAATCCAGAAGCTGACAGGAGATGAAA 104893979 17493 NM_000434.3(NEU1):c.946C>T (p.Pro316Ser) NEU1 Jan 01, 2002 MedGen:C0268228 Sialidosis type I germline 6 31860117 GATGTGACCTTCGACCCTGAGCTCGTGGACCCTGTGGTAGCTGCAGGAGCTGTAGTCACCA 80357367 70140 NM_007294.3(BRCA1):c.5239C>T (p.Gln1747Ter) BRCA1 Dec 14, 2016 MedGen:C2676676,OMIM:604370;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 1;Hereditary cancer-predisposing syndrome germline 17 43057090 AGAGGAGATGTGGTCAATGGAAGAAACCACCAAGGTCCAAAGCGAGCAAGAGAATCCCAGG 193922464 45375 NM_000448.2(RAG1):c.322C>T (p.Arg108Ter) RAG1 Jan 13, 2016 Human Phenotype Ontology:HP:0004430,MeSH:D016511,MedGen:C0085110,Orphanet:ORPHA183660,SNOMED CT:31323000;MedGen:C1832322,OMIM:601457,Orphanet:ORPHA331206 Severe combined immunodeficiency disease;Severe immunodeficiency, autosomal recessive, T-cell negative, B-cell negative, NK cell-positive germline 11 36573626 AGAGGCAAAGCGATCCATCAAGCCAACCTTCGACATCTCTGCCGCATCTGTGGGAATTCTT 876657403 190180 NM_013328.3(PYCR2):c.751C>T (p.Arg251Cys) PYCR2 May 07, 2015 MedGen:C4225332,OMIM:616420 Leukodystrophy, hypomyelinating, 10 germline 1 225921254 GCCCTGCACTTTCTAGAGAGTGGGGGCTTCCGCTCTCTGCTCATCAATGCAGTTGAGGCCT 387906851 39264 NM_005902.3(SMAD3):c.782C>T (p.Thr261Ile) SMAD3 Feb 01, 2011 MedGen:C3151087,OMIM:613795,Orphanet:ORPHA284984 Loeys-Dietz syndrome 3 germline 15 67181364 CGCAGCCATCCATGACTGTGGATGGCTTCACCGACCCCTCCAATTCGGAGCGCTTCTGCCT 794727516 193659 NM_020549.4(CHAT):c.418C>T (p.Gln140Ter) CHAT Mar 31, 2015 MedGen:C0393929,OMIM:254210,SNOMED CT:230670003 Familial infantile myasthenia germline 10 49619755 GGGCTGCCCAAACTGCCCGTGCCCCCGCTGCAGCAGACCCTGGCCACGTACCTGCAGTGCA 28933675 25320 NM_000132.3(F8):c.5530C>T (p.Pro1844Ser) F8 Oct 01, 1991 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154904867 TACTTTTGGAAAGTGCAACATCATATGGCACCCACTAAAGATGAGTTTGACTGCAAAGCCT 773770609 264863 NM_177550.4(SLC13A5):c.997C>T (p.Arg333Ter) SLC13A5 May 05, 2016 MedGen:C4014621,OMIM:615905;MedGen:CN517202 Epileptic encephalopathy, early infantile, 25;not provided germline 17 6695784 TTCTTCCTGCTGGTCATCCTGTGGTTCTCCCGAGACCCCGGCTTCATGCCCGGCTGGCTGA 398123503 99272 NM_000709.3(BCKDHA):c.632C>T (p.Thr211Met) BCKDHA Aug 23, 2013 MedGen:C0024776,OMIM:248600,SNOMED CT:27718001 Maple syrup urine disease germline 19 41419282 ACTTCGTCACTATCTCCTCTCCACTGGCCACGCAGATCCCTCAGGGTGAGGATGCATGCCC 761635539 190170 NM_006087.3(TUBB4A):c.568C>T (p.His190Tyr) TUBB4A Jul 05, 2016 MedGen:C2676244,OMIM:612438,Orphanet:ORPHA139441 Leukodystrophy, hypomyelinating, 6 germline 19 6495931 GTGGAGCCCTACAACGCCACGCTGTCTGTGCACCAGCTGGTGGAGAATACGGATGAGACCT 372504780 99608 NM_001297.4(CNGB1):c.952C>T (p.Gln318Ter) CNGB1 Jan 01, 2015 Human Phenotype Ontology:HP:0000547,MeSH:D012174,MedGen:C0035334,OMIM:268000,Orphanet:ORPHA791,SNOMED CT:28835009;MedGen:C3151066,OMIM:613767 Retinitis pigmentosa;Retinitis pigmentosa 45 germline;unknown 16 57950463 GAGGTTGAACCGCCCTGGGAGGATGCCCACCAGGATGTCAGTACCAGCCCACAGGGTACAG 796053376 202331 NM_003165.3(STXBP1):c.1672C>T (p.Gln558Ter) STXBP1 Nov 19, 2013 MedGen:CN517202 not provided germline 9 127682530 AATGAGATGCGCTGCGCCTACGAGGTGACCCAGGCCAACGGAAAGTGGGAGGTGCTGATAG 199473411 67623 NM_000218.2(KCNQ1):c.1096C>T (p.Arg366Trp) KCNQ1 Jun 13, 2017 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MeSH:D008133,MedGen:C0023976,SNOMED CT:9651007;MedGen:C0035828,OMIM:192500,Orphanet:ORPHA101016,SNOMED CT:20852007;MedGen:CN517202 Congenital long QT syndrome;Long QT syndrome;Long QT syndrome 1;not provided germline;maternal;unknown 11 2585275 CAGCAGAAGCAGAGGCAGAAGCACTTCAACCGGCAGATCCCGGCGGCAGCCTCACTCATTC 121434541 32683 NM_004933.2(CDH15):c.365C>T (p.Ala122Val) CDH15 Dec 01, 2008 MedGen:C2675488,OMIM:612580 Mental retardation, autosomal dominant 3 germline 16 89183555 GCCCTTGCTCTATGTTTGAACAGCTAAGAGCGTTTGCCCTGGACCTGGGAGGATCCACCCT 104894261 31727 NM_130799.2(MEN1):c.1579C>T (p.Arg527Ter) MEN1 Nov 01, 2017 MedGen:C0027672,SNOMED CT:699346009;na;MeSH:D018761,MedGen:C0025267,OMIM:131100,Orphanet:ORPHA652,SNOMED CT:30664006;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Metastatic pancreatic neuroendocrine tumours;Multiple endocrine neoplasia, type 1;not provided germline;somatic 11 64804588 AAGCCTCCTGGGACTGTCGCTGGCACAGCCCGAGGCCCTGAAGGTGGCAGCACGGCTCAGG 201213306 94316 NM_019026.4(TMCO1):c.412C>T (p.Arg138Ter) TMCO1 Feb 01, 2014 MedGen:C1859252,OMIM:213980,OMIM:614132,Orphanet:ORPHA1394 Craniofacial dysmorphism, skeletal anomalies, and mental retardation syndrome germline 1 165752166 AATGACAATTTGTTCGTCTCATTACAGGTTCGAATGAAATCCATGTTTGCTATTGGCTTTT 770637624 185160 NM_058216.2(RAD51C):c.709C>T (p.Arg237Ter) RAD51C Jul 05, 2017 MedGen:C3150659,OMIM:613399;MedGen:C3150653,OMIM:613390;MedGen:C3150653,OMIM:613390;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 3;Fanconi anemia, complementation group O;Fanconi anemia, complementation group O;Hereditary cancer-predisposing syndrome;not provided germline;unknown 17 58709862 ATCTAATATTATCTCTTCTGTATTTAGGTTCGACTAGTGATAGTGGATGGTATTGCTTTTC 121908189 19514 NM_031433.3(MFRP):c.523C>T (p.Gln175Ter) MFRP Mar 02, 2016 MedGen:C1970236,OMIM:611040,Orphanet:ORPHA251279;MedGen:C1836006,OMIM:609549 Microphthalmia, isolated 5;Nanophthalmos 2 germline 11 119345538 CCCCCCAACACCCACTGCGTGTGGCATATCCAGGTGGCCACAGACCATGCAATACAGCTCA 104894954 24810 NM_021083.3(XK):c.895C>T (p.Gln299Ter) XK Mar 01, 2001 MedGen:C0398568,OMIM:300842,Orphanet:ORPHA59306 McLeod neuroacanthocytosis syndrome germline X 37728022 GGTATCAACATGTTCTGCTGGTCTGCTGTACAGCTGAAAATTGACAGCCCTGACCTCATCA 63750140 94792 NM_000179.2(MSH6):c.2815C>T (p.Gln939Ter) MSH6 Jul 28, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Hereditary cancer-predisposing syndrome;Lynch syndrome germline 2 47800798 CCCAAAGCAGGCTTTGACTCTGATTATGACCAAGCTCTTGCTGACATAAGAGAAAATGAAC 797045479 206954 NM_004369.3(COL6A3):c.6181C>T (p.Arg2061Ter) COL6A3 Apr 28, 2014 Human Phenotype Ontology:HP:0003198,MedGen:C0026848 Myopathy germline 2 237361150 TTTCAGGGTATTCCTGGAGAAGACGGCTACCGAGGCTATCCTGGTGATGAGGGTGGACCCG 104894890 25988 NM_000475.4(NR0B1):c.847C>T (p.Gln283Ter) NR0B1 Dec 15, 1994 MedGen:C0342482,OMIM:300200,SNOMED CT:237764004 Congenital adrenal hypoplasia, X-linked germline X 30308517 CCCTGCTTCCAGGTGCTGCCCCTGGACCAGCAGCTGGTGCTGGTGCGCAACTGCTGGGCGT 879253842 224630 NM_000255.3(MUT):c.1271C>T (p.Pro424Leu) MUT - MedGen:C1855114,OMIM:251000 Methylmalonic aciduria due to methylmalonyl-CoA mutase deficiency germline 6 49451527 AAGAATCTGGGATTCCCAAAGTGGCTGATCCTTGGGGAGGTTCTTACATGATGGAATGTCT 773171451 203726 NM_172107.3(KCNQ2):c.1678C>T (p.Arg560Trp) KCNQ2 May 31, 2017 MedGen:C0393706,Orphanet:ORPHA1934;MedGen:C3150986,OMIM:613720,Orphanet:ORPHA439218;MedGen:CN517202 Early infantile epileptic encephalopathy;Early infantile epileptic encephalopathy 7;not provided germline 20 63413535 GTGTCCAAGCGGAAGTTCAAGGAGAGCCTGCGGCCCTACGACGTGATGGACGTCATCGAGC 587779406 106594 NM_000520.5(HEXA):c.1305C>T (p.Tyr435=) HEXA Oct 08, 2014 MedGen:C0039373,OMIM:272800,Orphanet:ORPHA845,SNOMED CT:111385000 Tay-Sachs disease inherited;unknown 15 72346552 ATCCTATGGCCCTGACTGGAAGGATTTCTACATAGTGGAACCCCTGGCATTTGAAGGTGAA 769053227 440202 NM_001080463.1(DYNC2H1):c.10921C>T (p.Pro3641Ser) DYNC2H1 Jun 01, 2017 MedGen:C0265275,Orphanet:ORPHA474,SNOMED CT:75049004 Jeune thoracic dystrophy unknown 11 103286264 ATGGCCATTTTTATTTTTTAGATTGCTCTCCCCAGTCTTTATCAGACCCTCTGCTTTGAAG 121907914 18503 NM_000280.4(PAX6):c.307C>T (p.Arg103Ter) PAX6 Nov 29, 2016 MedGen:C0344542,OMIM:106210;MedGen:CN517202 Aniridia 1;not provided de novo;germline;paternal 11 31801611 GAGTGCCCGTCCATCTTTGCTTGGGAAATCCGAGACAGATTACTGTCCGAGGGGGTCTGTA 879254981 246270 NM_000527.4(LDLR):c.1681C>T (p.Gln561Ter) LDLR Mar 30, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline;not applicable 19 11116188 GACATCTACTCGCTGGTGACTGAAAACATTCAGTGGCCCAATGGCATCACCCTAGGTATGT 61749747 101100 NM_004992.3(MECP2):c.730C>T (p.Gln244Ter) MECP2 Feb 05, 2015 MedGen:C1968550,OMIM:300055;MedGen:C0035372,OMIM:312750,Orphanet:ORPHA778,SNOMED CT:68618008 Mental retardation, X-linked, syndromic 13;Rett syndrome germline;unknown X 154031098 GCTGAGGGGGGTGGGGCCACCACATCCACCCAGGTCATGGTGATCAAACGCCCCGGCAGGA 121909588 32090 NM_001735.2(C5):c.4426C>T (p.Arg1476Ter) C5 May 15, 1995 MedGen:C0343047,OMIM:609536 Leiner disease germline 9 120962749 CAGATTCCCTCCAGTGATTTCCTTTGTGTACGATTCCGGATATTTGAACTCTTTGAAGTTG 118192173 28027 NM_000540.2(RYR1):c.325C>T (p.Arg109Trp) RYR1 Nov 07, 2013 Human Phenotype Ontology:HP:0003789,MedGen:C1850674,OMIM:255320,Orphanet:ORPHA98905;MedGen:CN517202 Minicore myopathy;not provided germline;unknown 19 38443612 ACGCTCCTGTATGGCCATGCCATCCTGCTCCGGCATGCACACAGCCGCATGGTGAGTGCAA 587783857 169960 NM_000252.2(MTM1):c.85C>T (p.Arg29Ter) MTM1 Feb 08, 2013 MedGen:C0410203,OMIM:310400,Orphanet:ORPHA596,SNOMED CT:46804001 Severe X-linked myotubular myopathy germline X 150596519 TGTTTCTAGACGTCTCGAGATGGAGTCAATCGAGATCTCACTGAGGCTGTTCCTCGACTTC 398123100 98225 NM_000033.3(ABCD1):c.1396C>T (p.Gln466Ter) ABCD1 Jun 03, 2013 MedGen:C0162309,OMIM:300100,Orphanet:ORPHA43,SNOMED CT:65389002 Adrenoleukodystrophy germline X 153737159 CCCCAGCCCCGCTGTGCTGTCTCTGCAGGCCAGGTGGTGGATGTGGAACAGGGGATCATCT 757259413 360004 NM_000280.4(PAX6):c.622C>T (p.Arg208Trp) PAX6 Mar 26, 2015 MedGen:CN517202 not provided germline 11 31794690 GATGAGGCTCAAATGCGACTTCAGCTGAAGCGGAAGCTGCAAAGAAATAGAACATCCTTTA 104894556 22563 NM_001303.3(COX10):c.674C>T (p.Pro225Leu) COX10 Oct 15, 2003 MedGen:C0268237,OMIM:220110,Orphanet:ORPHA254905,SNOMED CT:67434000 Hepatic failure, early-onset, and neurologic disorder due to cytochrome C oxidase deficiency germline 17 14159926 ACTCAAACATGAATAGGACAAAGAACAGACCGCTGGTTCGTGGACAGATCAGGTAAAATCA 121908555 20956 NM_000334.4(SCN4A):c.3472C>T (p.Pro1158Ser) SCN4A Oct 14, 2003 MedGen:C2750061,OMIM:613345 Hypokalemic periodic paralysis, type 2 germline 17 63945608 GTGGTGGTGAACGCCCTCCTAGGCGCCATCCCCTCCATCATGAATGTGCTGCTTGTCTGCC 1064796453 406301 NM_001904.3(CTNNB1):c.1759C>T (p.Arg587Ter) CTNNB1 Feb 24, 2017 MedGen:CN517202 not provided germline 3 41235799 CTTCACATCCTAGCTCGGGATGTTCACAACCGAATTGTTATCAGAGGACTAAATACCATTC -1 427247 NM_000038.5(APC):c.667C>T (p.Gln223Ter) APC - MedGen:CN240755 Familial adenomatous polyposis germline 5 112792467 TTATTTTAGCGAAGAATAGCCAGAATTCAGCAAATCGAAAAGGACATACTTCGTATACGAC 1057524195 369472 NM_006766.4(KAT6A):c.4381C>T (p.Gln1461Ter) KAT6A Jan 04, 2017 MedGen:CN517202 not provided germline 8 41933839 GCGGCGTGTCAGACCCTGCAGAGTTACACCCAGGCTGACGAGGACCCTCAGATGTCCATGG -1 432258 NM_182848.3(CLDN10):c.386C>T (p.Ser129Leu) CLDN10 Feb 26, 2018 MedGen:CN469329,OMIM:617671 HELIX SYNDROME germline 13 95560391 TTTCCCTCTAATATTTGTTAGGGCTGTGCTCAATGACTGGATGTTCCCTATATGCAAACAA 74315482 18127 NM_000487.5(ARSA):c.1462C>T (p.Gln488Ter) ARSA Jan 01, 1994 MedGen:CN068604 Arylsulfatase A pseudodeficiency germline 22 50625213 CAGGTGGCCCGGGGCGAGGACCCCGCCCTGCAGATCTGCTGTCATCCTGGCTGCACCCCCC 587781372 150636 NM_000179.2(MSH6):c.2932C>T (p.Gln978Ter) MSH6 Apr 08, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline;unknown 2 47800915 GTCTATTGGGGGATTGGTAGGAACCGTTACCAGCTGGAAATTCCTGAGAATTTCACCACTC 121918307 20425 NM_015713.4(RRM2B):c.850C>T (p.Gln284Ter) RRM2B Apr 17, 2014 MedGen:C2749861,OMIM:612075,Orphanet:ORPHA255235;MedGen:CN187502 Mitochondrial DNA depletion syndrome, encephalomyopathic form, with renal tubulopathy;RRM2B-related mitochondrial disease germline 8 102212829 CTCATTGGAATGAATTGCATTTTGATGAAACAGTACATTGAGTTTGTAGCTGACAGATTAC 80356673 27343 NM_002529.3(NTRK1):c.25C>T (p.Gln9Ter) NTRK1 Aug 05, 2008 MedGen:C0020074,OMIM:256800,Orphanet:ORPHA642,SNOMED CT:62985007;MedGen:C0020074,OMIM:256800,Orphanet:ORPHA642,SNOMED CT:62985007 Hereditary insensitivity to pain with anhidrosis;Hereditary insensitivity to pain with anhidrosis germline 1 156860959 GCCGCGATGCTGCGAGGCGGACGGCGCGGGCAGCTTGGCTGGCACAGCTGGGCTGCGGGGC 104886306 36127 NM_000495.4(COL4A5):c.5029C>T (p.Arg1677Ter) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108696349 AAAGCAGGAGACTTGAGGACACGAATTAGCCGATGTCAAGTGTGCATGAAGAGGACATAAC 121434567 31653 NM_001963.5(EGF):c.3209C>T (p.Pro1070Leu) EGF Aug 01, 2007 MedGen:C2673648,OMIM:611718 Hypomagnesemia 4, renal germline 4 110004540 AGAAGCTGCTATCGAAAAACCCAAAGAATCCTTATGAGGAGTCGAGCAGAGATGTGAGGAG 137853062 22072 NM_002454.2(MTRR):c.1361C>T (p.Ser454Leu) MTRR Mar 01, 2005 MedGen:C1856057,OMIM:236270,Orphanet:ORPHA2169 Homocystinuria-Megaloblastic anemia due to defect in cobalamin metabolism, cblE complementation type germline 5 7891405 ATCTTCCTAAACTTCAACCCAGACCATATTCGTGTGCAAGGTACTACTATTTATTCACGTA -1 433312 NM_000402.4(G6PD):c.1408C>T (p.Leu470Phe) G6PD Oct 09, 2016 MedGen:CN169374 not specified germline X 154532432 AACGTGAAGCTCCCTGACGCCTATGAGCGCCTCATCCTGGACGTCTTCTGCGGGAGCCAGA 796051896 227904 NM_000016.5(ACADM):c.1012C>T (p.Gln338Ter) ACADM Feb 20, 2015 MedGen:C0220710,OMIM:201450,Orphanet:ORPHA42,SNOMED CT:128596003 Medium-chain acyl-coenzyme A dehydrogenase deficiency germline 1 75761188 ATGAAAGTTGAACTAGCTAGAATGAGTTACCAGAGAGCAGCTTGGGAGGTTGATTCTGGTC 886041941 264186 NM_022455.4(NSD1):c.5842C>T (p.Arg1948Cys) NSD1 Oct 12, 2017 MedGen:CN517202 not provided germline 5 177280784 AAGCGCCAATATCCAGAGGTTGAAATTTTCCGCACATTACAGCGGGGTTGGGGTCTACGGA 104894841 25772 NM_000169.2(GLA):c.679C>T (p.Arg227Ter) GLA Oct 24, 2017 Human Phenotype Ontology:HP:0001071,MedGen:C0002986,OMIM:301500,Orphanet:ORPHA324,SNOMED CT:16652001;MedGen:CN517202 Fabry disease;not provided germline X 101398907 ACAGAAATCCGACAGTACTGCAATCACTGGCGAAATTTTGCTGACATTGATGATTCCTGGA 780957825 207832 NM_000525.3(KCNJ11):c.881C>T (p.Thr294Met) KCNJ11 May 18, 2015 MedGen:C0027773,OMIM:601820,SNOMED CT:42681006 Islet cell hyperplasia germline 11 17387211 TCGTCATCCTGGAAGGCGTGGTGGAAACCACGGGCATCACCACCCAGGCCCGCACCTCCTA 762114560 227867 NM_000016.5(ACADM):c.250C>T (p.Leu84Phe) ACADM Oct 12, 2017 MedGen:C0220710,OMIM:201450,Orphanet:ORPHA42,SNOMED CT:128596003;MedGen:CN517202 Medium-chain acyl-coenzyme A dehydrogenase deficiency;not provided germline;unknown 1 75732886 CCAGTCCCCCTAATTAGAAGAGCCTGGGAACTTGGTTTAATGAACACACACATTCCAGAGA 754360599 427016 NM_001171.5(ABCC6):c.1465C>T (p.Arg489Trp) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16190334 GAGCAAATGAGGCAGAAGGACTCACGGGCACGGCTCACCAGCTCTATCCTCAGGAACTCGA 116840815 33936 NM_000166.5(GJB1):c.43C>T (p.Arg15Trp) GJB1 Aug 24, 2016 MedGen:CN118851;MedGen:C0393808,OMIM:302800,Orphanet:ORPHA101075,SNOMED CT:230552007;MedGen:CN517202 Charcot-Marie-Tooth Neuropathy X;X-linked hereditary motor and sensory neuropathy;not provided germline X 71223750 GGTTTGTACACCTTGCTCAGTGGCGTGAACCGGCATTCTACTGCCATTGGCCGAGTATGGC 368705240 270897 NM_002225.3(IVD):c.1117C>T (p.Gln373Ter) IVD Mar 16, 2016 MedGen:C0268575,OMIM:243500,Orphanet:ORPHA33,SNOMED CT:87827003 Isovaleryl-CoA dehydrogenase deficiency germline 15 40416332 GTGATTCTTTACTCAGCTGAGTGTGCCACACAGGTAGCCCTGGACGGCATTCAGTGTTTTG 34809449 30029 NM_000184.2(HBG2):c.-167C>T HBG2 Sep 11, 1990 MedGen:C1841621,OMIM:141749 Fetal hemoglobin quantitative trait locus 1 germline 11 5254895 CACCCATGGGTTGGCCAGCCTTGCCTTGACCAATAGCCTTGACAAGGCAAACTTGACCAAT 869025284 223023 NM_020771.3(HACE1):c.454C>T (p.Gln152Ter) HACE1 Feb 04, 2016 MedGen:C4225215,OMIM:616756,Orphanet:ORPHA464282 Spastic paraplegia and psychomotor retardation with or without seizures germline 6 104833122 GGGCGGACAGAACTACTCCATGACCTTGTGCAGCATGTCAGTGATGTTGATGTTGAGGATG 147903984 271170 NM_022132.4(MCCC2):c.214C>T (p.Arg72Ter) MCCC2 Mar 15, 2016 MedGen:C1859499,OMIM:210210 3-methylcrotonyl CoA carboxylase 2 deficiency germline 5 71596297 ATTTCTATCATAGGAGGTGGTGAGAAAGCCCGAGCACTTCACATATCAAGAGGAAAACTAT 121913293 187363 NM_000314.6(PTEN):c.517C>T (p.Arg173Cys) PTEN Jun 12, 2017 MedGen:C0027672,SNOMED CT:699346009;Human Phenotype Ontology:HP:0030692,MeSH:D001932,MedGen:C0006118,SNOMED CT:126952004;MedGen:C1959582,OMIM:601728,Orphanet:ORPHA306498;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Neoplasm of brain;PTEN hamartoma tumor syndrome;not provided de novo;germline;somatic 10 87952142 CACCAGGGAGTAACTATTCCCAGTCAGAGGCGCTATGTGTATTATTATAGCTACCTGTTAA 147277149 259828 NM_002454.2(MTRR):c.1573C>T (p.Arg525Ter) MTRR Jul 13, 2016 MedGen:CN517202 not provided germline 5 7895749 GATGTAATATTTCAGATATCCATCTCTCCTCGAACAACAAATTCTTTCCACTTACCAGATG 753770252 226911 NM_017890.4(VPS13B):c.9547C>T (p.Gln3183Ter) VPS13B Mar 31, 2014 MeSH:D030342,MedGen:C0950123 Inborn genetic diseases germline 8 99832510 TCAGTACTGGATGCATCCCTGCTTCAGAAACAGATCATGCTGGGCTTTTCTCCTGCCCCAG 1114167709 419486 NM_000179.2(MSH6):c.1969C>T (p.Gln657Ter) MSH6 Aug 31, 2015 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline 2 47799952 CTAAGTGATGGCATTGGGGTGATGTTACCCCAGGTGCTTAAAGGTATGACTTCAGAGTCTG 730880404 179721 NM_005159.4(ACTC1):c.968C>T (p.Ala323Val) ACTC1 Jan 26, 2014 MedGen:CN517202 not provided germline 15 34791136 ATCGTATGCAGAAGGAAATCACTGCTCTGGCTCCTAGCACCATGAAGATTAAGGTAAAGAA 121912824 32523 NM_000091.4(COL4A3):c.4441C>T (p.Arg1481Ter) COL4A3 Jan 01, 1997 MedGen:C1567744,OMIM:203780,Orphanet:ORPHA88919 Alport syndrome, autosomal recessive germline 2 227307898 TTTTCTTTTCTTTTTGTACAAGGAAATCAACGAGCCCACGGACAAGACCTTGGTAATGTCC 876659319 235335 NM_024675.3(PALB2):c.115C>T (p.Gln39Ter) PALB2 Jan 26, 2017 MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C0027672,SNOMED CT:699346009 Familial cancer of breast;Hereditary cancer-predisposing syndrome germline 16 23637946 TGGGGCTGTTTTTGTCTCCTCTAGCGTGCCCAAAGAGCTGAAAAGATTAAGCATTCTATTA 121918167 15995 NM_000275.2(OCA2):c.2228C>T (p.Pro743Leu) OCA2 Jan 25, 2017 MedGen:C0268495,OMIM:203200,Orphanet:ORPHA79432,SNOMED CT:26336006;MedGen:CN517202 Tyrosinase-positive oculocutaneous albinism;not provided germline 15 27871170 CCCTGGCGTCGTCCCTGATTGACAACATCCCGTTCACTGCTACCATGGTGAGTTGCACATG 869312693 225860 NM_001376.4(DYNC1H1):c.10573C>T (p.Arg3525Cys) DYNC1H1 Jun 02, 2015 MedGen:C3281202,OMIM:614563 Mental retardation, autosomal dominant 13 de novo 14 102034135 GCCTACGCGGGTTACTTTGACCAGCAGATGCGTCAGAACTTGTTCACTACCTGGTCCCATC 397518422 94288 NM_015295.2(SMCHD1):c.1580C>T (p.Thr527Met) SMCHD1 Oct 03, 2013 Gene:2490,MedGen:C1834671,OMIM:158901 Facioscapulohumeral muscular dystrophy 2 germline 18 2700851 ACAAATTCCAGGTCAGCACAAATAAATTGACGTTTATGGATCTTGAGCTAAAATTGAAAGA 10800597 417644 NR_040073.1(MIR181A1HG):n.363+1456C>T MIR181A1HG - MedGen:C1879321,Orphanet:ORPHA98834 Acute myeloid leukemia with maturation germline 1 198898955 TGCACAAAAAATCAACTGTCCTAAGCCATTCAGCTTGTCTATAAGTGCTGTTGGCTTAATT 557164942 190955 NM_000070.2(CAPN3):c.1477C>T (p.Arg493Trp) CAPN3 Jun 27, 2017 MedGen:C1869123,OMIM:253600,Orphanet:ORPHA267;MedGen:CN517202 Limb-girdle muscular dystrophy, type 2A;not provided germline 15 42401763 GCCCTGATGCAGAAGAACCGGCGGAAGGACCGGAAGCTAGGGGCCAGTCTCTTCACCATTG 60798368 77310 NM_001927.3(DES):c.46C>T (p.Arg16Cys) DES Aug 16, 2016 Human Phenotype Ontology:HP:0003715,MedGen:C2678065,Orphanet:ORPHA593,SNOMED CT:699269005;MedGen:CN517202 Myofibrillar myopathy;not provided unknown 2 219418508 TCGTCCAGCCAGCGCGTGTCCTCCTACCGCCGCACCTTCGGCGGGGCCCCGGGCTTCCCAC 104893650 19245 NM_181457.3(PAX3):c.149C>T (p.Pro50Leu) PAX3 Feb 13, 1992 MedGen:C1847800,OMIM:193500 Waardenburg syndrome type 1 germline 2 222297150 AGCTCGGCGGTGTTTTTATCAACGGCAGGCCGCTGCCCAACCACATCCGCCACAAGATCGT 119483085 20159 NM_001135242.1(NDRG1):c.442C>T (p.Arg148Ter) NDRG1 Oct 08, 2016 MedGen:C1832334,OMIM:601455,Orphanet:ORPHA99950;MedGen:CN043578 Charcot-Marie-Tooth disease, type 4D;Charcot-Marie-Tooth disease, type IV germline 8 133258374 GGAACAGGAGCAGGCGCCTACATCCTAACTCGATTTGCTGTGAGTGCTTTGGCATTTTTTG 121909492 22049 NM_002316.3(LMX1B):c.745C>T (p.Arg249Ter) LMX1B Dec 01, 1998 MedGen:C0027341,OMIM:161200,SNOMED CT:22199006 Nail-patella syndrome germline 9 126693527 TGACCTGTTCCCCTCTCTCTGAGCCAGGTCCGAGAGACACTGGCAGCTGAGACGGGCCTCA 121909485 20418 NM_001172696.1(TSFM):c.997C>T (p.Arg333Trp) TSFM Apr 29, 2014 MedGen:C1864840,OMIM:610505,Orphanet:ORPHA168566;MedGen:C1864840,OMIM:610505,Orphanet:ORPHA168566 Combined oxidative phosphorylation deficiency 3;Combined oxidative phosphorylation deficiency 3 germline 12 57796539 CCTCAGGGGGTGTCGGTAGTAGACTTTGTGCGGTTTGAATGTGGAGAAGGTGAAGAGGCAG -1 446089 NM_014727.2(KMT2B):c.4204C>T (p.Arg1402Ter) KMT2B Jul 26, 2017 MedGen:CN517202 not provided germline 19 35727524 CCGTGTGCTGGGGCAGCGCAGCCCCGCTGGCGAGAGGCCCTGAGCGGGGCCCTCCAGGGGG 1131691093 420823 NM_001042492.2(NF1):c.6715C>T (p.Gln2239Ter) NF1 Sep 08, 2015 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 17 31338035 TGTGGATCTTTTAATTGCAGATTTGCATTCCAATATAATCCATCCCTGCAACCAAGAGCTC 864309656 215650 NM_004092.3(ECHS1):c.413C>T (p.Ala138Val) ECHS1 Oct 01, 2015 MedGen:C4225391,OMIM:616277 Mitochondrial short-chain enoyl-coa hydratase 1 deficiency germline 10 133369905 AGCCAGTCATCGCTGCTGTCAATGGCTATGCCGTGAGTGTTGCTGCCAAGAGTCTCCTCCT 28939087 19778 NM_018389.4(SLC35C1):c.439C>T (p.Arg147Cys) SLC35C1 May 01, 2001 MedGen:C0398739,OMIM:266265,Orphanet:ORPHA99843 Congenital disorder of glycosylation type 2C germline 11 45806240 TACGTCGGTGTGGCCTTCTACAATGTGGGCCGCTCACTCACCACCGTCTTCAACGTGCTGC 121918477 28342 NM_000506.3(F2):c.940C>T (p.Arg314Cys) F2 Nov 15, 1986 MedGen:C0272317,SNOMED CT:33297000 Hereditary factor II deficiency disease germline 11 46726563 GATGAGGACTCAGACAGGGCCATCGAAGGGCGTACCGCCACCAGTGAGTACCAGACTTTCT 76687508 108539 NM_000277.2(PAH):c.721C>T (p.Arg241Cys) PAH Mar 28, 2017 MedGen:C0031485,OMIM:261600,Orphanet:ORPHA716,SNOMED CT:154735006;MedGen:CN517202 Phenylketonuria;not provided germline;unknown 12 102852936 CTTCTTTTCATCCCAGCTTGCACTGGTTTCCGCCTCCGACCTGTGGCTGGCCTGCTTTCCT 28939073 20520 NM_006329.3(FBLN5):c.1051C>T (p.Arg351Trp) FBLN5 Jun 01, 2011 MedGen:C1837187,OMIM:608895 Age-related macular degeneration 3 germline 14 91877621 TGCAGAGACCAGCCCTTTACCATCTTGTACCGGGACATGGACGTGGTGTCAGGACGCTCCG 1057519314 361895 NM_001024845.2(SLC6A9):c.1498C>T (p.Gln500Ter) SLC6A9 Jan 19, 2017 MedGen:C4310943,OMIM:617301,Orphanet:ORPHA289863 Glycine encephalopathy with normal serum glycine germline 1 44000805 ATGCTGGGATTCCCACCACCCCTCTTCTTTCAGATCTGCTGGCGCTTCGTCTCTCCCGCCA 886041250 264686 NM_000359.2(TGM1):c.379C>T (p.Arg127Ter) TGM1 Jun 27, 2017 MedGen:CN517202 not provided germline 14 24261824 TTGCTGAGCTCGCGCTCGGACCAGAACCGCCGAGAGCACCACACAGACGAGTATGAGTACG 886039854 260693 NM_001256865.1(DNAJC6):c.2326C>T (p.Gln776Ter) DNAJC6 Oct 13, 2016 MedGen:C3809811,OMIM:615528 Parkinson disease 19a, juvenile-onset germline 1 65408685 GCAGCTGATTTTGAAGACCTACTCTCTGGTCAAGGTTTCAATGCTCACAAAGACAAAAAGG 587783690 168914 NM_003482.3(KMT2D):c.13450C>T (p.Arg4484Ter) KMT2D Feb 08, 2013 MedGen:CN030661,OMIM:147920 Kabuki syndrome 1 germline 12 49031255 CTCAGCACTGGGCGGGGGTCCGAGGGGCTGCGAGCTGAGATCAACGGGCACATTGACAGCA 137853127 17558 NM_015265.3(SATB2):c.715C>T (p.Arg239Ter) SATB2 Jul 11, 2017 Gene:100190983,MedGen:C2676739,OMIM:612313,Orphanet:ORPHA251019;MedGen:CN517202 Chromosome 2q32-q33 deletion syndrome;not provided germline 2 199349159 TTTTATCTCTTAACAGTGGAAAGAGTGGAACGAGAAAACCTTTCAGACTATTGTGTTCTGG 1085307305 414250 NM_001204.6(BMPR2):c.1151C>T (p.Ala384Val) BMPR2 - MedGen:C0152171,OMIM:178600,SNOMED CT:26174007 Primary pulmonary hypertension germline 2 202532607 TTTATCAGGTTGGCACTATCAGATATATGGCACCAGAAGTGCTAGAAGGAGCTGTGAACTT 727504010 177362 NM_022132.4(MCCC2):c.994C>T (p.Arg332Ter) MCCC2 Jan 21, 2014 MedGen:C1859499,OMIM:210210 3-methylcrotonyl CoA carboxylase 2 deficiency germline 5 71635241 GGTGCTAACCTTAAGAGGAGCTTTGATGTCCGAGAGGTATGTGAAAGTGGAACTGTGAGCT 56199535 23451 NM_000392.4(ABCC2):c.2302C>T (p.Arg768Trp) ABCC2 Dec 01, 2010 MedGen:C0022350,OMIM:237500,Orphanet:ORPHA234,SNOMED CT:44553005 Dubin-Johnson syndrome germline 10 99818820 GGTATAAATCTTAGTGGGGGTCAGAAGCAGCGGATCAGCCTGGCCAGAGCTACCTACCAAA 104893796 28093 NM_000539.3(RHO):c.281C>T (p.Thr94Ile) RHO Jan 01, 1999 MedGen:C1864869,OMIM:610445 Congenital stationary night blindness, autosomal dominant 1 germline 3 129529014 TCTTCATGGTCCTAGGTGGCTTCACCAGCACCCTCTACACCTCTCTGCATGGATACTTCGT 111033743 36564 NM_000155.3(GALT):c.619C>T (p.Gln207Ter) GALT Feb 22, 2016 MedGen:C0268151,OMIM:230400,Orphanet:ORPHA79239,SNOMED CT:124354006 Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase germline 9 34648388 GATATTGCCCAGCGTGAGGAGCGATCTCAGCAGGCCTATAAGAGTCAGCATGGAGAGCCCC 387907145 40183 NM_024589.2(ROGDI):c.286C>T (p.Gln96Ter) ROGDI Dec 23, 2015 MedGen:C0406740,OMIM:226750,SNOMED CT:109478007 Kohlschutter's syndrome germline;maternal 16 4800548 GATGTGAACCTGAAGATGCCCCGGAACAACCAGCTGCTGCACTTCGCCTTCCGGGAGGACA 1060499549 389089 NM_021224.5(ZNF462):c.3787C>T (p.Arg1263Ter) ZNF462 Jan 25, 2017 MedGen:CN241055;MedGen:CN240835 Craniosynostosis;Mental retardation, autosomal dominant paternal 9 106927699 TCTAATCTGGAGCGGGACAAAACGAAACTCCGAGCACTCAAATGTAGGCAGTGCTCATATA -1 482201 NM_000214.2(JAG1):c.1615C>T (p.Gln539Ter) JAG1 Jan 04, 2018 MedGen:CN517202 not provided germline 20 10648065 TGTGAGCCTAATCCCTGCCAGAACGGTGCCCAGTGCTACAACCGTGCCAGTGACTATTTCT 118192140 76904 NM_000540.2(RYR1):c.14126C>T (p.Thr4709Met) RYR1 Oct 29, 2016 MedGen:C0751951,OMIM:117000,Orphanet:ORPHA597,SNOMED CT:43152001;Human Phenotype Ontology:HP:0003789,MedGen:C1850674,OMIM:255320,Orphanet:ORPHA98905;MedGen:CN239331;MedGen:CN517202 Central core disease;Minicore myopathy;RYR1-Related Disorders;not provided germline;paternal;unknown 19 38573304 AGGGGCAGTGGGACCGACTGGTGCTCAACACGCCGTAAGGACCCAGCCCCCACCTCAGGGT -1 446247 NM_175914.4(HNF4A):c.403C>T (p.Gln135Ter) HNF4A Jul 21, 2017 MedGen:CN517202 not provided germline 20 44413777 AGCAGCCTGCCCTCCATCAATGCGCTCCTGCAGGCGGAGGTCCTGTCCCGACAGGTACCGG 566415362 213818 NM_213599.2(ANO5):c.1210C>T (p.Arg404Ter) ANO5 Jul 26, 2017 MedGen:C1969785,OMIM:611307,Orphanet:ORPHA206549;MedGen:C2750076,OMIM:613319,Orphanet:ORPHA399096;MedGen:CN517202 Limb-girdle muscular dystrophy, type 2L;Miyoshi muscular dystrophy 3;not provided germline 11 22255400 GTCACCTTATTTTTGGAGTTTTGGAAACAACGACAAGCCAGACTGGAATATGAATGGGACC 61751383 22946 NM_000350.2(ABCA4):c.6088C>T (p.Arg2030Ter) ABCA4 Mar 18, 2015 Human Phenotype Ontology:HP:0000556,MedGen:C0854723,Orphanet:ORPHA71862,SNOMED CT:314407005;MedGen:C1858080,Orphanet:ORPHA364055;MeSH:C535804,MedGen:C1855465,OMIM:248200;MedGen:CN517202 Retinal dystrophy;Retinal dystrophy, early-onset severe;Stargardt disease 1;not provided germline;unknown 1 94005500 TTTGATGCAATTGATGAGCTGCTCACAGGACGAGAACATCTTTACCTTTATGCCCGGCTTC 398123741 100110 NM_003482.3(KMT2D):c.3532C>T (p.Gln1178Ter) KMT2D Aug 07, 2012 MedGen:CN030661,OMIM:147920 Kabuki syndrome 1 germline 12 49050056 GTCTACCCCGAATGCAAGCAGACAGCAGGGCAGGGCTCACCATGTGAAGAACAGGAAGAGC 397514332 76319 NM_001077494.3(NFKB2):c.2557C>T (p.Arg853Ter) NFKB2 Dec 15, 2016 MedGen:C3809991,OMIM:615577,Orphanet:ORPHA293978;MedGen:CN169374 Common variable immunodeficiency 10;not specified germline;tested-inconclusive 10 102402138 GGAGTGAGGCTGCTGAGGGGTCCAGAAACCCGAGACAAGCTGCCCAGCACAGGTAAAGGGG 74315362 16546 NM_000298.5(PKLR):c.1151C>T (p.Thr384Met) PKLR Sep 15, 1991 MedGen:C1849472,OMIM:266200 Pyruvate kinase deficiency of red cells germline 1 155293556 TGGAGAGCATGATTACCAAGCCCCGGCCAACGAGGGCAGAGACAAGCGATGTCGCCAATGC 397515405 48196 NM_020822.2(KCNT1):c.2782C>T (p.Arg928Cys) KCNT1 Feb 19, 2015 MedGen:C3554306,OMIM:615005 Epilepsy, nocturnal frontal lobe, 5 germline 9 135779411 ACCACGGAGCTCACCCACCCTTCCAACATGCGCTTCATGCAGTTCCGCGCCAAGGACAGCT 12720459 18160 NM_000218.2(KCNQ1):c.1022C>T (p.Ala341Val) KCNQ1 Sep 05, 2017 MeSH:D008133,MedGen:C0023976,SNOMED CT:9651007;MedGen:C0035828,OMIM:192500,Orphanet:ORPHA101016,SNOMED CT:20852007;MedGen:CN517202 Long QT syndrome;Long QT syndrome 1;not provided germline;unknown 11 2583535 GCTTCTCTGTCTTTGCCATCTCCTTCTTTGCGCTCCCAGCGGTAGGTGCCCCGTGGGTGCG 121908098 19298 NM_000784.3(CYP27A1):c.1420C>T (p.Arg474Trp) CYP27A1 Aug 01, 2013 MedGen:C0238052,OMIM:213700,Orphanet:ORPHA909,SNOMED CT:63246000 Cholestanol storage disease germline 2 218814701 TTTGGCTCTGTGCCCTTTGGCTATGGGGTCCGGGCCTGCCTGGGCCGCAGGATTGCAGAGC 180177214 200485 NM_000030.2(AGXT):c.409C>T (p.Gln137Ter) AGXT Nov 27, 2014 MedGen:C0268164,OMIM:259900,Orphanet:ORPHA93598,SNOMED CT:65520001 Primary hyperoxaluria, type I germline 2 240870694 ACCAAGGACCCTGGAGGCCACTACACACTGCAGGAGGTGGAGGAGGTAGGGGACCCGGGGT 397508183 67890 NM_000492.3(CFTR):c.1240C>T (p.Gln414Ter) CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline 7 117548671 GGATTTGGGGAATTATTTGAGAAAGCAAAACAAAACAATAACAATAGAAAAACTTCTAATG 137852648 24248 NM_002047.3(GARS):c.893C>T (p.Pro298Leu) GARS May 01, 2009 MedGen:C1832274,OMIM:601472,Orphanet:ORPHA99938 Charcot-Marie-Tooth disease type 2D germline 7 30612107 GACTTACTTAAATTTATAGGTACTTGAGACCAGAAACTGCACAGGGGATTTTCTTGAATTT 886039491 260116 NM_004380.2(CREBBP):c.5602C>T (p.Arg1868Trp) CREBBP Nov 14, 2016 MedGen:CN517202 not provided germline 16 3729445 CGCCTGCAGCAGGCCCAGCTCATGCGCCGGCGGATGGCCACCATGAACACCCGCAACGTGC 387907332 51084 NM_007075.3(WDR45):c.637C>T (p.Gln213Ter) WDR45 Apr 16, 2013 MedGen:C3550973,OMIM:300894,Orphanet:ORPHA329284 Neurodegeneration with brain iron accumulation 5 germline X 49075636 CAGCCAGGCACTGTAGTGGCCTCAGCCTCCCAGAAGGGTACCCTTATTCGCCTCTTTGACA 104893996 20304 NM_003764.3(STX11):c.802C>T (p.Gln268Ter) STX11 Apr 01, 2006 MedGen:C1863728,OMIM:603552 Hemophagocytic lymphohistiocytosis, familial, 4 germline 6 144187429 CAGGCCAAGGCGCAGGTGCGGAAGGCCGTGCAGTACGAGGAGAAGAACCCCTGCCGGACCC 797045467 207558 NM_017780.3(CHD7):c.5023C>T (p.Gln1675Ter) CHD7 Mar 02, 2015 MedGen:C0265354,OMIM:214800,Orphanet:ORPHA138,SNOMED CT:47535005 CHARGE association germline 8 60845036 TGGGATCTGATCACACCCACAGCGGATGGCCAGACTCGAGCCTTGGTCAACCATTCCGGTA 886041226 265153 NM_000444.5(PHEX):c.2104C>T (p.Arg702Ter) PHEX Jun 12, 2017 MedGen:C0733682,OMIM:307800,Orphanet:ORPHA89936,SNOMED CT:82236004;MedGen:CN517202 Familial X-linked hypophosphatemic vitamin D refractory rickets;not provided germline X 22245366 AGGTGCAATTCCTACAGACCAGAAGCTGCCCGAGAACAAGTCCAAATTGGTGCTCACAGTC 483352867 136636 NM_003156.3(STIM1):c.910C>T (p.Arg304Trp) STIM1 Mar 09, 2017 MedGen:C0410207,OMIM:160565,Orphanet:ORPHA2593,SNOMED CT:240087000;MedGen:C1861451,OMIM:185070,Orphanet:ORPHA3204;MedGen:C1861451,OMIM:185070,Orphanet:ORPHA3204 Myopathy with tubular aggregates;Stormorken syndrome;Stormorken syndrome de novo;germline;unknown 11 4074620 AAGCAGGAAGCCCAGCGGCTGAAGGAGCTGCGGGAGGGTACTGAGAATGAGCGGAGCCGCC 202073531 361768 NM_033068.2(ACP4):c.331C>T (p.Arg111Cys) ACP4 Jan 18, 2017 MedGen:C4310630,OMIM:617297 Amelogenesis imperfecta, type IJ germline 19 50791683 CAGGTGTACATCCGCAGCACGGACTTTGACCGCACGCTGGAGAGTGCCCAGGCCAACCTTG 749188610 428626 NM_006772.2(SYNGAP1):c.2899C>T (p.Arg967Ter) SYNGAP1 Sep 14, 2016 MedGen:C2675473,OMIM:612621 Mental retardation, autosomal dominant 5 germline 6 33443451 CATCACCACCACCACCACCATCACCACCACCGAGGTGGAGAGCCCCCTGGGGACACCTTTG 62638651 24937 NM_000328.2(RPGR):c.703C>T (p.Pro235Ser) RPGR Jul 01, 1996 MedGen:C1848295,OMIM:300029;MedGen:CN517202 Retinitis pigmentosa 15;not provided germline X 38310690 CCCAATCAGCTCCTGGGCAATCACAGAACACCCCAGCTGGTGTCTGAAATTCCGGAGAAGG -1 441146 NM_001540.4(HSPB1):c.539C>T (p.Thr180Ile) HSPB1 Feb 23, 2017 MedGen:CN517202 not provided germline 7 76304094 CCAAGCTAGCCACGCAGTCCAACGAGATCACCATCCCAGTCACCTTCGAGTCGCGGGCCCA 398123331 98746 NM_000321.2(RB1):c.1399C>T (p.Arg467Ter) RB1 May 15, 2017 MedGen:C0027672,SNOMED CT:699346009;Human Phenotype Ontology:HP:0009919,MeSH:D012175,MedGen:C0035335,OMIM:180200,Orphanet:ORPHA790;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Retinoblastoma;not provided germline;somatic 13 48380062 TTTTTAAATTATCTGTTTCAGGAAGAAGAACGATTATCCATTCAAAATTTTAGGTAAATTT 62642937 15667 NM_000277.2(PAH):c.1139C>T (p.Thr380Met) PAH Jul 12, 2017 Human Phenotype Ontology:HP:0004923,MedGen:C0751435;MedGen:C0031485,OMIM:261600,Orphanet:ORPHA716,SNOMED CT:154735006;MedGen:CN517202 Hyperphenylalaninemia, non-pku;Phenylketonuria;not provided germline;unknown 12 102843706 AGAAGACAGCCATCCAAAATTACACTGTCACGGAGTTCCAGCCCCTCTATTACGTGGCAGA 376561094 232257 NM_001128425.1(MUTYH):c.628C>T (p.Gln210Ter) MUTYH Sep 25, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1837991,OMIM:608456,Orphanet:ORPHA247798;MedGen:CN517202 Hereditary cancer-predisposing syndrome;MYH-associated polyposis;not provided germline 1 45332636 CACATGCCACGTACAGCAGAGACCCTGCAGCAGCTCCTGCCTGGCGTGGGGCGCTACACAG 199422298 47715 NM_198253.2(TERT):c.2147C>T (p.Ala716Val) TERT May 10, 2012 Human Phenotype Ontology:HP:0001915,MedGen:C0002874,OMIM:609135,SNOMED CT:306058006 Aplastic anemia not provided 5 1278780 CTCCACTCACACAGGTGGATGTGACGGGCGCGTACGACACCATCCCCCAGGACAGGCTCAC 200293302 150563 NM_058216.2(RAD51C):c.577C>T (p.Arg193Ter) RAD51C Aug 04, 2017 MedGen:C3150659,OMIM:613399;MedGen:C3150653,OMIM:613390;MedGen:C3150653,OMIM:613390;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 3;Fanconi anemia, complementation group O;Fanconi anemia, complementation group O;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline;unknown 17 58703201 AATTAAGAGTGTTTTGTTGTTTCAGAACACCGAAAAGCTTTGGAGGATTTCACTCTTGATA 137854498 24539 NM_005502.3(ABCA1):c.5038C>T (p.Arg1680Trp) ABCA1 Jan 01, 2002 na Tangier disease, variant germline 9 104798504 GCCAGCTTTGTCGTATTCCTGATCCAGGAGCGGGTCAGCAAAGCAAAACACCTGCAGTTCA -1 441807 NM_000296.3(PKD1):c.11941C>T (p.Gln3981Ter) PKD1 Feb 06, 2015 MedGen:CN517202 not provided germline 16 2090943 CGCCGCTTCACTAGCTTCGACCAGGTGGCGCAGCTGAGCTCCGCAGCCCGTGGCCTGGCGG 121434394 21194 NM_004621.5(TRPC6):c.2683C>T (p.Arg895Cys) TRPC6 Jul 01, 2005 MedGen:C1858915,OMIM:603965 Focal segmental glomerulosclerosis 2 germline 11 101453068 AAGGAAATTAAGCAGGACATCTCAAGTCTCCGCTATGAACTCCTTGAAGAAAAATCTCAGA -1 461388 NM_213599.2(ANO5):c.148C>T (p.Arg50Ter) ANO5 Jun 22, 2017 MedGen:C1969785,OMIM:611307,Orphanet:ORPHA206549 Limb-girdle muscular dystrophy, type 2L germline 11 22218255 TCTTTATTGGTTGCTTCACAGCCTGCAAAGCGATTCAATTTGTTCCTGAGGCGGCGGCTTA -1 432435 NM_012479.3(YWHAG):c.394C>T (p.Arg132Cys) YWHAG Sep 19, 2017 MedGen:CN477042,OMIM:617665 EPILEPTIC ENCEPHALOPATHY, EARLY INFANTILE, 56 germline 7 76329927 TTCTACCTGAAGATGAAAGGGGACTACTACCGCTACCTGGCTGAAGTGGCCACCGGAGAGA 387907065 39902 NM_001145320.1(ADAMTSL2):c.661C>T (p.Arg221Cys) ADAMTSL2 Jun 01, 2011 MedGen:C3278147,OMIM:231050,SNOMED CT:28557005 Geleophysic dysplasia 1 germline 9 133540980 AGCAGCTGCACCCACGTGACGGGCAACTATCGCAAGGGGAATGCCCACCTTGGTAAGCCAC 750880909 439914 NM_022124.5(CDH23):c.6085C>T (p.Arg2029Trp) CDH23 Jul 01, 2017 MedGen:C1832394,OMIM:601386 Deafness, autosomal recessive 12 germline 10 71791167 GTGACCGTGAGGTCAGGTGTCATCATTGACCGGGAGGCATTCTCGCCACCCATCCTGGAGC 121918519 28280 NM_002743.3(PRKCSH):c.1240C>T (p.Gln414Ter) PRKCSH Mar 01, 2003 Human Phenotype Ontology:HP:0006557,MedGen:C0158683,OMIM:174050,SNOMED CT:72925005 Congenital cystic disease of liver germline 19 11448604 CCCAACGGGGAGTTTGCTTACCTGTACAGCCAGTGCTACGAGCTCACCACCAACGAGTGCG 774115247 421373 NM_004369.3(COL6A3):c.6604C>T (p.Arg2202Ter) COL6A3 Sep 21, 2015 MedGen:CN517202 not provided germline 2 237354922 GGACTTTTTCTTCCACAGGGTGGCTTTGGCCGAAGGGGACCCCCCGGAGCTAAGGTGAGCC 781079248 462695 NM_000059.3(BRCA2):c.1219C>T (p.Gln407Ter) BRCA2 Jun 12, 2017 MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009 Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome germline 13 32332697 CAACTAACCCTTTCAGGTCTAAATGGAGCCCAGATGGAGAAAATACCCCTATTGCATATTT 132630312 26074 NM_001399.4(EDA):c.463C>T (p.Arg155Cys) EDA Jul 14, 2017 MedGen:C0162359,OMIM:305100,SNOMED CT:239007005;Human Phenotype Ontology:HP:0007607,MedGen:C1706004,Orphanet:ORPHA238468;MedGen:CN517202 Hypohidrotic X-linked ectodermal dysplasia;Hypohidrotic ectodermal dysplasia;not provided germline X 69957093 CCATACTCTGAAGAAGAAAGTAGGCGTGTTCGCCGCAATAAAAGAAGCAAAAGCAATGAAG 121918603 27999 NM_001035.2(RYR2):c.6982C>T (p.Pro2328Ser) RYR2 Feb 16, 2012 MedGen:C4053736,OMIM:604772 Catecholaminergic polymorphic ventricular tachycardia type 1 germline 1 237639068 AATGTCGTGGTGAGATTGCTCATTCGGAGGCCTGAGTGTTTTGGTCCTGCTTTGAGAGGAG 121964994 26998 NM_014425.4(INVS):c.1807C>T (p.Arg603Ter) INVS Aug 01, 2003 MedGen:C1865872,OMIM:602088,SNOMED CT:444558002 Infantile nephronophthisis germline 9 100284342 GCTTCCAGAAAGCGAGAGGAAGAAAACAAACGAAAAGAGGCAGAACAGCAAAAAGGAAGGC -1 442706 NM_006147.3(IRF6):c.25C>T (p.Arg9Trp) IRF6 Jul 25, 2017 MedGen:C0175697,OMIM:119300,SNOMED CT:79261008;MedGen:CN517202 Van der Woude syndrome;not provided de novo;germline 1 209801389 CAGATCATGGCCCTCCACCCCCGCAGAGTCCGGCTAAAGCCCTGGCTGGTGGCCCAGGTGG 121918310 20430 NM_015713.4(RRM2B):c.979C>T (p.Arg327Ter) RRM2B Jul 20, 2016 MedGen:C2751319,OMIM:613077;MedGen:CN187502;MedGen:CN517202 Autosomal dominant progressive external ophthalmoplegia with mitochondrial DNA deletions 5;RRM2B-related mitochondrial disease;not provided germline 8 102208210 TTAGAAGGAAAAACAAATTTCTTTGAGAAACGAGTTTCAGAGTATCAGCGTTTTGCAGTTA 869025320 223707 NM_032504.1(UNC80):c.151C>T (p.Arg51Ter) UNC80 Jun 14, 2016 MedGen:C4225203,OMIM:616801 Hypotonia, infantile, with psychomotor retardation and characteristic facies 2 germline 2 209775898 TTTTTGTTTTTGTATTTACAGTCCTTTGAGCGAGTGTTGGTAGAAAACAAGCTGCATGGCC 137852254 25646 NM_000133.3(F9):c.1025C>T (p.Thr342Met) F9 Mar 31, 2017 MedGen:C0008533,OMIM:306900,Orphanet:ORPHA98879,SNOMED CT:41788008;MedGen:CN169374 Hereditary factor IX deficiency disease;not specified germline X 139561710 CACCTATTTGCATTGCTGACAAGGAATACACGAACATCTTCCTCAAATTTGGATCTGGCTA 886039447 259843 NM_001069.2(TUBB2A):c.533C>T (p.Thr178Met) TUBB2A Jul 08, 2016 MedGen:CN517202 not provided germline 6 3154668 GCGTCATGCCCTCACCCAAGGTGTCAGACACGGTGGTGGAGCCCTACAACGCCACCCTCTC 29001566 28053 NM_000539.3(RHO):c.1040C>T (p.Pro347Leu) RHO Apr 05, 2017 Human Phenotype Ontology:HP:0000547,MeSH:D012174,MedGen:C0035334,OMIM:268000,Orphanet:ORPHA791,SNOMED CT:28835009;MedGen:C3151001,OMIM:613731;MedGen:CN517202 Retinitis pigmentosa;Retinitis pigmentosa 4;not provided germline;unknown 3 129533711 TGTCCAAGACGGAGACGAGCCAGGTGGCCCCGGCCTAAGACCTGCCTAGGACTCTGTGGCC 886039217 259232 NM_176787.4(PIGN):c.1966C>T (p.Gln656Ter) PIGN Sep 29, 2016 MedGen:C3279775,OMIM:614080,Orphanet:ORPHA280633 Multiple congenital anomalies-hypotonia-seizures syndrome 1 germline 18 62102796 ATAAAGGAAGAGCTATTGGTACATCTGTTACAGGTCAGTTACAGATTTTCAATACTATGTT 587783211 165918 NM_018136.4(ASPM):c.10168C>T (p.Arg3390Ter) ASPM Dec 17, 2013 MedGen:C1837501,OMIM:608716;MedGen:C1837501,OMIM:608716 Primary autosomal recessive microcephaly 5;Primary autosomal recessive microcephaly 5 germline 1 197086966 GTAACTGTGCATTTTATTTTGTAGGATGTACGAAGTAGGTCCAAAGTTGTTGACCGTATTT 147713329 49764 NM_025137.3(SPG11):c.6091C>T (p.Arg2031Ter) SPG11 Jan 31, 2013 MedGen:C1858479,OMIM:604360,Orphanet:ORPHA2822 Spastic paraplegia 11, autosomal recessive not provided 15 44573661 CGGAAAATCTTGGCCTCTCAGCAGCCTGACCGATGCAAACGAGCCCAGGCCTTCATCAGCA 864309504 215004 NM_001303256.2(MORC2):c.260C>T (p.Ser87Leu) MORC2 Jul 10, 2017 MedGen:C4225243,OMIM:616688,Orphanet:ORPHA466768;MedGen:CN517202 Charcot-Marie-Tooth disease, axonal, type 2z;not provided germline 22 30949809 ATGCTGCCAGTGTGATCCAGTTTGGGAAGTCGGCCAAGCGAACACCTGAGTCTACTCAGAT 794726871 190202 NM_000070.2(CAPN3):c.145C>T (p.Arg49Cys) CAPN3 May 12, 2016 MedGen:C1869123,OMIM:253600,Orphanet:ORPHA267 Limb-girdle muscular dystrophy, type 2A germline 15 42359950 CCAAGTGGCATCTATTCAGCCATCATCAGCCGCAATTTTCCTATTATCGGAGTGAAAGAGA 557012154 186798 NM_000051.3(ATM):c.802C>T (p.Gln268Ter) ATM Jun 19, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Ataxia-telangiectasia syndrome;Hereditary cancer-predisposing syndrome;not provided germline;unknown 11 108244927 ATTCTTCCCACTTTGCTTTATATTTGGACTCAACATAGGCTTAATGATTCTTTAAAAGAAG -1 446533 NM_005629.3(SLC6A8):c.1411C>T (p.Gln471Ter) SLC6A8 Jul 13, 2017 MedGen:CN517202 not provided germline X 153694362 TCTGTCCCCCAGGGCGGGATGTACGTCTTCCAGCTGTTTGACTACTACTCGGCCAGCGGCA -1 442171 NM_000435.2(NOTCH3):c.421C>T (p.Arg141Cys) NOTCH3 Jun 18, 2014 MedGen:CN517202 not provided germline 19 15192218 GGTGCCCGCTGCTCAGTGGGGCCCGATGGACGCTTCCTCTGCTCCTGCCCACCTGGCTACC 1057516094 354013 NM_172107.3(KCNQ2):c.802C>T (p.Leu268Phe) KCNQ2 Nov 16, 2016 MedGen:C3150986,OMIM:613720,Orphanet:ORPHA439218;Human Phenotype Ontology:HP:0200134,MedGen:C0543888 Early infantile epileptic encephalopathy 7;Epileptic encephalopathy de novo;germline 20 63442420 AACGACCACTTTGACACCTACGCGGATGCACTCTGGTGGGGCCTGGTGAGTTGTGGTCATT 398123000 97528 NM_001271.3(CHD2):c.1396C>T (p.Arg466Ter) CHD2 May 09, 2016 MedGen:C3809278,OMIM:615369;MedGen:CN517202 Epileptic encephalopathy, childhood-onset;not provided germline 15 92948970 TTTGTTTTTCAGGCCCTGAAGCAGAGACCACGATTTGTAGCTTTAAAGAAACAACCTGCAT 387906961 39598 NM_024596.4(MCPH1):c.215C>T (p.Ser72Leu) MCPH1 Dec 01, 2010 MedGen:C1855081,OMIM:251200 Primary autosomal recessive microcephaly 1 germline 8 6414865 AAGCTCAGAAGAGAGGCGTAAAGCTCGTTTCGGTGCTCTGGGTGGAAAAGTAAGCAGTTTC 1057517688 359165 NM_032793.4(MFSD2A):c.476C>T (p.Thr159Met) MFSD2A Jan 23, 2018 MedGen:C4225310,OMIM:616486 Primary autosomal recessive microcephaly 15 germline 1 39965333 TTTTCTATTGCCTCTTTGAAACAATGGTCACGGTGAGTGTGGGTACCTCCCTTGGGTGTCT 199473480 67668 NM_000218.2(KCNQ1):c.1637C>T (p.Ser546Leu) KCNQ1 Jul 12, 2017 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MeSH:D008133,MedGen:C0023976,SNOMED CT:9651007;MedGen:C0035828,OMIM:192500,Orphanet:ORPHA101016,SNOMED CT:20852007;MedGen:CN517202 Congenital long QT syndrome;Long QT syndrome;Long QT syndrome 1;not provided germline 11 2776006 ACGATGTGCGGGACGTCATTGAGCAGTACTCGCAGGGCCACCTCAACCTCATGGTGCGCAT 876659720 235987 NM_007294.3(BRCA1):c.3979C>T (p.Gln1327Ter) BRCA1 Jun 17, 2015 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 17 43091552 TTGATTGGTTCTTCCAAACAAATGAGGCATCAGTCTGAAAGCCAGGGAGTTGGTCTGAGTG 121918245 16873 NM_001023570.3(IQCB1):c.1069C>T (p.Gln357Ter) IQCB1 Mar 01, 2005 MedGen:C1836517,OMIM:609254 Senior-Loken syndrome 5 germline 3 121790133 GACCTCAAATTACAATTGCAACTTCAAAGACAGAGAGCCATGAGACTTTCCCGAGAATTGC -1 458975 NM_017780.3(CHD7):c.5428C>T (p.Arg1810Ter) CHD7 Feb 16, 2017 MedGen:C0265354,OMIM:214800,Orphanet:ORPHA138,SNOMED CT:47535005 CHARGE association germline 8 60850516 GGCACAGGCTATGAGAAGTACAACTCCATGCGAGCTGACCCCGCGCTGTGCTTTCTGGAAC 121918263 16902 NM_001164730.1(REEP1):c.358C>T (p.Arg120Ter) REEP1 Jul 13, 2012 MedGen:C1853247,OMIM:610250,Orphanet:ORPHA101011 Spastic paraplegia 31, autosomal dominant germline 2 86252037 ATCGATGATTGTCTGGTCCAAGCAAAAGACCGAAGTTACGATGCCCTTGTGCACTTCGGGA 727503258 179614 NM_000257.3(MYH7):c.2347C>T (p.Arg783Cys) MYH7 May 05, 2014 MedGen:CN517202 not provided germline 14 23425358 CTGGAGGAAATGAGGGACGAGAGGCTGAGCCGCATCATCACGCGTATCCAGGCCCAGTCCC 1057518637 360712 NM_000059.3(BRCA2):c.2266C>T (p.Gln756Ter) BRCA2 Mar 16, 2017 MedGen:C0027672,SNOMED CT:699346009;Human Phenotype Ontology:HP:0100013,MeSH:D001943,MedGen:C1458155,Orphanet:ORPHA180250,SNOMED CT:126926005 Hereditary cancer-predisposing syndrome;Neoplasm of the breast germline 13 32336621 GTGGAATACAGTGATACTGACTTTCAATCCCAGAAAAGTCTTTTATATGATCATGAAAATG 752127949 237297 NM_000159.3(GCDH):c.1156C>T (p.Arg386Ter) GCDH Oct 05, 2017 MedGen:CN517202 not provided germline 19 12897776 GGGAAAGCCCTGGACATCGCCCGCCAGGCCCGAGACATGCTGGGGGGGAATGGGATTTCTG 121434336 16721 NM_005908.3(MANBA):c.1276C>T (p.Gln426Ter) MANBA Dec 01, 2002 MedGen:C4048196,OMIM:248510,Orphanet:ORPHA118,SNOMED CT:238047006 Beta-D-mannosidosis germline 4 102669004 ATGTTTGCCTGTGCCCTTTATCCAACTGATCAGGGCTTCCTGGATTCAGTGACAGCAGAAG -1 481645 NM_004238.2(TRIP12):c.1507C>T (p.Arg503Ter) TRIP12 Dec 29, 2017 MedGen:CN517202 not provided germline 2 229815179 TCTCTTCTTTTCTAGATGAACCATGCTTGTCGAGCCTTAACATACATGATGGAAGCACTTC 199422219 29274 NM_000253.3(MTTP):c.1783C>T (p.Arg595Ter) MTTP Sep 02, 1994 MedGen:C0000744,OMIM:200100,Orphanet:ORPHA14,SNOMED CT:190787008 Abetalipoproteinaemia germline 4 99611156 TTCCTCATATGTTGCAGCAAAATTGTCCGTCGAGTTCTGAAGGAAATGGTCGCTCACAATT 727504089 177238 NM_138694.3(PKHD1):c.2725C>T (p.Arg909Ter) PKHD1 Dec 13, 2013 MedGen:C0085548,OMIM:263200,Orphanet:ORPHA731,SNOMED CT:28770003 Autosomal recessive polycystic kidney disease germline 6 52043721 AGAAATTTTGCCTCATTTCAGGTGGTTGTGCGAGTGAATGATGTACCAGCTCATTGCCCAG 373785974 196433 NM_207111.3(RNF216):c.904C>T (p.Gln302Ter) RNF216 Apr 28, 2015 MedGen:C1859305,OMIM:212840,Orphanet:ORPHA1173 Gordon Holmes syndrome germline 7 5741113 CCTGCCCATCCTCTAGGAGAGTTTGAAGACCAGCAGTTAGCAAGTGATGATGAAGAGCCAG -1 425299 NM_020928.1(ZSWIM6):c.2737C>T (p.Arg913Ter) ZSWIM6 Feb 09, 2018 MedGen:CN800196,OMIM:617865 NEURODEVELOPMENTAL DISORDER WITH MOVEMENT ABNORMALITIES, ABNORMAL GAIT, AND AUTISTIC FEATURES de novo;germline 5 61541917 ATGCGAATGACACTGTCAACCTTAAATTGGCGACGGCGGGAGATGGTGAGGTGGCTGGTAA 121913144 29731 NM_000208.3(INSR):c.3079C>T (p.Arg1027Ter) INSR Mar 15, 1991 MedGen:C0271690,OMIM:610549,SNOMED CT:9859006;MedGen:C0271695,OMIM:262190,Orphanet:ORPHA769,SNOMED CT:33559001 Insulin-resistant diabetes mellitus AND acanthosis nigricans;Pineal hyperplasia AND diabetes mellitus syndrome germline 19 7125462 GAGGTGTCTCGAGAGAAGATCACCCTCCTTCGAGAGCTGGGGCAGGGCTCCTTCGGCATGG 779626155 405690 NM_175629.2(DNMT3A):c.2311C>T (p.Arg771Ter) DNMT3A Aug 13, 2015 MedGen:CN517202 not provided germline 2 25240313 ATGGGCGTTAGTGACAAGAGGGACATCTCGCGATTTCTCGAGGTATAGCCAGCAACCTTGG 113994160 39653 NM_032580.3(HES7):c.73C>T (p.Arg25Trp) HES7 Jan 17, 2013 MedGen:C3150942,OMIM:613686;MedGen:C1852521,OMIM:122600 Spondylocostal dysostosis 4, autosomal recessive;Spondylocostal dysostosis 5 germline 17 8123096 ATGCTCAAGCCGCTTGTGGAGAAGCGGCGCCGGGACCGCATCAACCGCAGCCTGGAAGAGC 879255245 107263 NM_198173.2(GRHL3):c.1171C>T (p.Arg391Cys) GRHL3 Jan 02, 2014 MedGen:C1847604,OMIM:606713 Van der Woude syndrome 2 germline 1 24342238 TGTGGCTTGGGCACTGAGCGCCTGGTACACCGTGCTGTCTGCCAGATCAAGATCTTCTGTG 200532368 421997 NM_000153.3(GALC):c.379C>T (p.Arg127Ter) GALC May 04, 2017 MedGen:C0023521,OMIM:245200,Orphanet:ORPHA487,SNOMED CT:192782005;MedGen:CN517202 Galactosylceramide beta-galactosidase deficiency;not provided germline 14 87986552 ATGCATTATGCACTAGATGAGAATTATTTCCGAGGATACGAGTGGTGGTTGATGAAAGAAG 869312889 226685 NM_139276.2(STAT3):c.1988C>T (p.Thr663Ile) STAT3 Sep 15, 2016 MedGen:C4014795,OMIM:615952,Orphanet:ORPHA438159 Autoimmune disease, multisystem, infantile-onset, 1 de novo;germline 17 42322395 TCATCATGGGCTATAAGATCATGGATGCTACCAATATCCTGGTGTCTCCACTGGTCTATCT 397515639 94245 NM_001942.3(DSG1):c.76C>T (p.Arg26Ter) DSG1 May 23, 2017 MedGen:C1835661,OMIM:148700;MedGen:CN517202 Keratosis palmoplantaris striata 1;not provided germline 18 31326608 CAGGTGGTGGTAGAAGTTAACAGTGAATTCCGAATCCAGGTAATATATAACAAATCCATTT 137853311 26791 NM_001110556.1(FLNA):c.1966C>T (p.Leu656Phe) FLNA Aug 15, 2001 MedGen:C1848213,OMIM:300049,OMIM:300537,SNOMED CT:448227009 Periventricular nodular heterotopia 1 germline X 154364582 CACGTGCTGTGCAACAGCGAAGACATCCGCCTCAGCCCCTTCATGGCTGACATCCGTGACG 104894811 25471 NM_001097642.2(GJB1):c.514C>T (p.Pro172Ser) GJB1 Dec 24, 1993 MedGen:C0393808,OMIM:302800,Orphanet:ORPHA101075,SNOMED CT:230552007 X-linked hereditary motor and sensory neuropathy germline X 71224221 ATGGTGCGGCTGGTCAAGTGCGACGTCTACCCCTGCCCCAACACAGTGGACTGCTTCGTGT 863224997 213866 NM_004006.2(DMD):c.4240C>T (p.Gln1414Ter) DMD Jun 21, 2017 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001;MedGen:CN169374 Duchenne muscular dystrophy;not specified germline X 32390175 CTAATAATGCTATCCTCCCAACAGAAAATCCAATCTGATTTGACAAGTCATGAGATCAGTT 121912423 29860 NM_001025107.2(ADAR):c.1192C>T (p.Gln398Ter) ADAR Jul 01, 2006 MedGen:C0406775,OMIM:127400,Orphanet:ORPHA41,SNOMED CT:239085000 Symmetrical dyschromatosis of extremities germline 1 154597125 GAGGCGACCAACTCCATGGCTTCTGATAACCAGGTAGGGCGTTTTCCTACTCAAAAGATAC 886039520 260251 NM_003073.4(SMARCB1):c.1096C>T (p.Arg366Cys) SMARCB1 Jul 14, 2016 MedGen:CN517202 not provided germline 22 23833681 CTGACAGACGCTGAGATGGAGAAGAAGATCCGCGACCAGGACAGGAACACGAGGTACCCCT 121434511 16931 NM_015488.4(PNKD):c.26C>T (p.Ala9Val) PNKD Jan 12, 2016 Human Phenotype Ontology:HP:0012194,MedGen:C1863061;MedGen:C1869117,OMIM:118800,Orphanet:ORPHA98810,SNOMED CT:49949003;Human Phenotype Ontology:HP:0007166,MedGen:C1836174;Human Phenotype Ontology:HP:0002268,MedGen:C0393588 Episodic hemiplegia;Paroxysmal choreoathetosis;Paroxysmal dyskinesia;Paroxysmal dystonia germline;unknown 2 218270561 TGAACATGGCGGCGGTGGTAGCTGCTACGGCGCTGAAGGGCCGGGGGGCGAGAAATGCCCG -1 482023 NM_003482.3(KMT2D):c.12730C>T (p.Gln4244Ter) KMT2D Jun 20, 2017 MedGen:CN517202 not provided germline 12 49031975 AGTCAGGCAGTACGCCAGACCCCACCCTACCAGGAGCCTGGGACCCAGACCTCTCCCCTCC 863225426 214754 NM_024809.4(TCTN2):c.1873C>T (p.Gln625Ter) TCTN2 May 13, 2011 MedGen:C4084841,OMIM:616654 Joubert syndrome 24 germline 12 123706829 GCATCCGTCCAGTTTATTAAAATTCCTGCACAGTTACCCCACCCCCTGACAAGGTACTCCA 794726809 187742 NM_001165963.1(SCN1A):c.4412C>T (p.Ser1471Phe) SCN1A Dec 20, 2014 MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002 Severe myoclonic epilepsy in infancy de novo 2 165998102 TTTACTTTGTTATTTTCATCATCTTTGGGTCCTTCTTCACCTTGAACCTGTTTATTGGTGT 104894446 22028 NM_002408.3(MGAT2):c.869C>T (p.Ser290Phe) MGAT2 Oct 01, 1996 MedGen:C0349654,OMIM:212066,SNOMED CT:277894008 Carbohydrate-deficient glycoprotein syndrome type II germline 14 49622137 AGCAAGAGTGCCCTGAATGTGATGTTCTCTCCCTGGGGACCTATAGTGCCAGTCGCAGTTT 864309712 215782 NM_015202.3(KIAA0556):c.2674C>T (p.Gln892Ter) KIAA0556 Feb 08, 2018 Human Phenotype Ontology:HP:0002335,MedGen:C0431399,Orphanet:ORPHA475,SNOMED CT:253175003,SNOMED CT:716997004;MedGen:C4084843,OMIM:616784 Joubert syndrome;Joubert syndrome 26 germline 16 27749634 ACGCCGTCACGGTCAAGGTGGCGCAGTGAGCAGGAGCACACACTTCACGAGTCATGGAGCT 61750434 21811 NM_153818.1(PEX10):c.373C>T (p.Arg125Ter) PEX10 Aug 01, 1998 MedGen:C3553948,OMIM:614871 Peroxisome biogenesis disorder 6B germline 1 2408679 CAGGAGCTGCAGGCTGACCCCGACAGTGGGCGACCCTTGCAGGGGAGCCTGGGGCCAGGTG 61751362 26858 NM_001110792.1(MECP2):c.916C>T (p.Arg306Ter) MECP2 Feb 26, 2018 MedGen:C0162635,OMIM:105830,Orphanet:ORPHA72,SNOMED CT:76880004;MedGen:C1845336,OMIM:300496;MedGen:C1845336,OMIM:300496;Gene:57790,MedGen:C1846058,OMIM:300260,Orphanet:ORPHA1762;MedGen:C1968550,OMIM:300055;MedGen:C1968550,OMIM:300055;MedGen:C1968550,OMIM:300055;MedGen:C0035372,OMIM:312750,Orphanet:ORPHA778,SNOMED CT:68618008;MedGen:C0035372,OMIM:312750,Orphanet:ORPHA778,SNOMED CT:68618008;MedGen:C0035372,OMIM:312750,Orphanet:ORPHA778,SNOMED CT:68618008;MedGen:C1968556,OMIM:300673,Orphanet:ORPHA209370;MedGen:CN517202 Angelman syndrome;Autism, susceptibility to, X-linked 3;Autism, susceptibility to, X-linked 3;MECP2 duplication syndrome;Mental retardation, X-linked, syndromic 13;Mental retardation, X-linked, syndromic 13;Mental retardation, X-linked, syndromic 13;Rett syndrome;Rett syndrome;Rett syndrome;Severe neonatal-onset encephalopathy with microcephaly;not provided de novo;germline;unknown X 154030948 AAAAAGAAAGCCGTGAAGGAGTCTTCTATCCGATCTGTGCAGGAGACCGTACTCCCCATCA 866380588 402552 NM_000546.5(TP53):c.574C>T (p.Gln192Ter) TP53 Sep 20, 2016 MedGen:C0085390,Orphanet:ORPHA524,SNOMED CT:428850001 Li-Fraumeni syndrome germline 17 7674957 CACTGATTGCTCTTAGGTCTGGCCCCTCCTCAGCATCTTATCCGAGTGGAAGGAAATTTGC 886039662 259916 NM_000368.4(TSC1):c.2593C>T (p.Gln865Ter) TSC1 Jun 16, 2016 MedGen:CN517202 not provided germline 9 132900747 CTTGGGGAGGTCAACGAGCTCTATTTGGAACAACTGCAGAACAAGCACTCAGATACCACAA 587777294 132053 NM_152305.2(POGLUT1):c.652C>T (p.Arg218Ter) POGLUT1 Jan 02, 2014 MedGen:C3810313,OMIM:615696 Dowling-degos disease 4 germline 3 119486846 ACGTGTTTCTTTTATAGGACAAGTCCAGAACGAGATCCTCTCATTCTTCTGTCTCGGAAAA 281865107 39633 NM_024747.5(HPS6):c.223C>T (p.Gln75Ter) HPS6 Dec 01, 2009 MedGen:C3888007,OMIM:614075 Hermansky-Pudlak syndrome 6 germline 10 102065697 GCGGAGCTAGAGCGGGCCTGGCCGGCCGGCCAGCCCTCCCCGCTGGACGCCTTCTTCCTGC 587780082 133292 NM_001128425.1(MUTYH):c.1012C>T (p.Gln338Ter) MUTYH Jul 13, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C3272841;MedGen:C1837991,OMIM:608456,Orphanet:ORPHA247798;MedGen:CN517202 Hereditary cancer-predisposing syndrome;MUTYH-associated polyposis;MYH-associated polyposis;not provided germline 1 45331835 GGATCTCCGTTCCCAGCTCCCAACACTGGACAGTGCCACCTGTGCCTGCCTCCCTCGGAGC 119456962 17675 NM_153240.4(NPHP3):c.1729C>T (p.Arg577Ter) NPHP3 Sep 19, 2014 MedGen:C1858392,OMIM:604387,SNOMED CT:444749006;MedGen:C2673885,OMIM:267010,Orphanet:ORPHA3032;MedGen:C2673883,OMIM:208540,Orphanet:ORPHA294415 Adolescent nephronophthisis;Meckel syndrome type 7;Renal-hepatic-pancreatic dysplasia germline 3 132700348 ACCAGCTCAGAGTCCTCCTTGATTATTAAACGACTAACTCTAAAGGTATAGTATCCCATCT 398124603 102514 NM_183050.3(BCKDHB):c.970C>T (p.Arg324Ter) BCKDHB Jun 14, 2016 MedGen:C0024776,OMIM:248600,SNOMED CT:27718001 Maple syrup urine disease germline;unknown 6 80273153 TTTCTCTTTCAGTCTGTGATCAAAACAGGGCGACTGCTAATCAGTCACGAGGCTCCCTTGA 751425603 372716 NM_006755.1(TALDO1):c.574C>T (p.Arg192Cys) TALDO1 Feb 07, 2017 MedGen:CN517202 not provided germline 11 763456 GGTGTGACCCTCATCTCCCCATTTGTTGGGCGCATCCTTGATTGGCATGTGGCAAACACCG 387907235 44226 NM_000349.2(STAR):c.577C>T (p.Arg193Ter) STAR Mar 24, 1995 MedGen:C0342474,OMIM:201710,Orphanet:ORPHA90790,SNOMED CT:44231009 Cholesterol monooxygenase (side-chain cleaving) deficiency germline 8 38146036 GACTTTGTGAGCGTGCGCTGTGCCAAGCGCCGAGGCTCCACCTGTGTGCTGGCTGGCATGG 771917370 245672 NM_000527.4(LDLR):c.631C>T (p.His211Tyr) LDLR Mar 25, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline;not applicable 19 11105537 GAGTTCCACTGCCTAAGTGGCGAGTGCATCCACTCCAGCTGGCGCTGTGATGGTGGCCCCG 863224032 210959 NM_024996.5(GFM1):c.700C>T (p.Arg234Ter) GFM1 May 02, 2014 MedGen:CN517202 not provided germline 3 158652106 CAAAATATTTGCTTTCTTAGTCAGATTGTTCGATATGGTGAGATTCCAGCTGAATTAAGGG 387906916 39451 NM_022726.3(ELOVL4):c.646C>T (p.Arg216Ter) ELOVL4 Jun 11, 2017 MedGen:C3280856,OMIM:614457,Orphanet:ORPHA352333;MedGen:CN517202 Ichthyosis, spastic quadriplegia, and mental retardation;not provided germline 6 79919443 CCATGGATTCAGAAATATCTTTGGTGGAAACGATACCTGACTATGTTGCAACTGGTGAGTT 137853294 28126 NM_000321.2(RB1):c.1981C>T (p.Arg661Trp) RB1 Jul 06, 2017 MedGen:C0027672,SNOMED CT:699346009;Human Phenotype Ontology:HP:0009919,MeSH:D012175,MedGen:C0035335,OMIM:180200,Orphanet:ORPHA790;MedGen:C4288013 Hereditary cancer-predisposing syndrome;Retinoblastoma;Vulvar adenocarcinoma of mammary gland type germline;somatic 13 48459708 ATTCCCACAGTGTATCGGCTAGCCTATCTCCGGCTAAATACACTTTGTGAACGCCTTCTGT 118204048 15806 NM_015702.2(MMADHC):c.748C>T (p.Arg250Ter) MMADHC Apr 03, 2008 MedGen:C1848552,OMIM:277410 Methylmalonic acidemia with homocystinuria cblD germline 2 149570117 AACACTCTTTTTGAAACTGATGAACGCTACCGACATTTAGGATTCTCTGTTGATGACCTTG 267607573 57239 NM_170707.3(LMNA):c.700C>T (p.Gln234Ter) LMNA Feb 13, 2017 EFO:EFO_0000407,Human Phenotype Ontology:HP:0001644,MedGen:C0007193,Orphanet:ORPHA217604,SNOMED CT:195021004;MedGen:CN517202 Primary dilated cardiomyopathy;not provided germline 1 156134865 ACCCGACTGGTGGAGATTGACAATGGGAAGCAGCGTGAGTTTGAGAGCCGGCTGGCGGATG 80356903 69645 NM_007294.3(BRCA1):c.3718C>T (p.Gln1240Ter) BRCA1 Jul 14, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline 17 43091813 TTATTTGGTAAAGTAAACAATATACCTTCTCAGTCTACTAGGCATAGCACCGTTGCTACCG 1057519541 362353 NM_003159.2(CDKL5):c.2641C>T (p.Gln881Ter) CDKL5 Nov 16, 2016 MedGen:C0014547,SNOMED CT:29753000 Focal epilepsy de novo X 18628515 TTCTCAGAAATTCGGATTCACCCCCTGAGCCAGGCCTCTGGCGGGAGCAGCAACATCCGGC 121965059 15220 NM_000274.3(OAT):c.677C>T (p.Ala226Val) OAT Mar 01, 1995 MedGen:CN068398 Gyrate atrophy of choroid and retina with pyridoxine-responsive ornithinemia germline 10 124403892 AGCGTGCTCTTCAGGATCCAAATGTGGCTGCGTTCATGGTAGAACCAATTCAGGGTGAAGC 397518046 57783 NM_206933.2(USH2A):c.9304C>T (p.Gln3102Ter) USH2A Mar 11, 2013 MedGen:C1848634,OMIM:276901 Usher syndrome, type 2A germline 1 215838058 ATATATGCCTGCGTGAAAAGCAATGGAACCCAAATTACCACTGTGGAAGACACTCCAAGTG 779526456 214310 NM_001173990.2(TMEM216):c.217C>T (p.Arg73Cys) TMEM216 Feb 23, 2015 MedGen:C1842577,OMIM:608091 Joubert syndrome 2 unknown 11 61393964 CTCCTCCTTTATCTTGGAATTGAAGTAATTCGCCTGTTTTTTGGTAAGTGTTGTCCAGAGA 121917965 79419 NM_006920.4(SCN1A):c.301C>T (p.Arg101Trp) SCN1A Mar 28, 2017 MedGen:C0393706,Orphanet:ORPHA1934;MedGen:C1858673,OMIM:604403;MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002 Early infantile epileptic encephalopathy;Generalized epilepsy with febrile seizures plus, type 2;Severe myoclonic epilepsy in infancy de novo;germline;unknown 2 166058652 ATAGTATTGAATAAAGGGAAGGCCATCTTCCGGTTCAGTGCCACCTCTGCCCTGTACATTT 141340759 83245 NM_021628.2(ALOXE3):c.631C>T (p.Arg211Ter) ALOXE3 Jan 02, 2018 MedGen:CN517202 not provided germline 17 8114533 CCATCCCTGATGTACATGGAGCCCAATGTTCGATACTCAGCCACCAAGACGATCTCGCTGC 139024319 243921 NM_134425.2(SLC26A1):c.554C>T (p.Thr185Met) SLC26A1 Jul 20, 2016 Human Phenotype Ontology:HP:0008672,MedGen:C1833683,OMIM:167030,SNOMED CT:444717006 Calcium oxalate urolithiasis germline 4 991150 GCTACGCCATCCGTGTCGCCACCGCCCTCACGCTGATGACCGGGCTTTACCAGGTGAGGAG 104886405 36052 NM_000495.4(COL4A5):c.4177C>T (p.Gln1393Ter) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108681867 CAGCCTGGGCTAAAGGGTCTACCAGGACCCCAAGGACCTCAAGGCTTACCAGGTACCAATG -1 474645 NM_000535.6(PMS2):c.2413C>T (p.Gln805Ter) PMS2 Nov 27, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 7 5977620 GGGGTCATGTGCCGGCCTTCCCGAGTCAAGCAGATGTTTGCCTCCAGAGCCTGCCGGAAGT 132630289 26125 NM_001128834.2(PLP1):c.128C>T (p.Thr43Ile) PLP1 Jul 31, 1995 Human Phenotype Ontology:HP:0003269,MedGen:C0205711,OMIM:312080,Orphanet:ORPHA702,SNOMED CT:64855000 Pelizaeus-Merzbacher disease germline X 103785705 GTGGCTGTGGACATGAAGCCCTCACTGGCACAGAAAAGCTAATTGAGACCTATTTCTCCAA 866402530 234362 NM_000051.3(ATM):c.8218C>T (p.Gln2740Ter) ATM Jun 30, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0027672,SNOMED CT:699346009 Ataxia-telangiectasia syndrome;Hereditary cancer-predisposing syndrome germline 11 108335911 CAGGTCTTCCAGATGTGTAATACATTACTGCAGAGAAACACGGAAACTAGGAAGAGGAAAT 575822089 227149 NM_001163435.2(TBCK):c.376C>T (p.Arg126Ter) TBCK Oct 30, 2017 MedGen:C4225161,OMIM:616900;MedGen:CN517202 Hypotonia, infantile, with psychomotor retardation and characteristic facies 3;not provided germline 4 106262103 GCATTGTCTCCTCATAATATCCTGTTGGACCGAAAGGTAATTGTTAAATCATGTAATAAAT -1 440071 NM_020800.2(IFT80):c.1561C>T (p.Leu521Phe) IFT80 Jun 01, 2017 MedGen:C0265275,Orphanet:ORPHA474,SNOMED CT:75049004 Jeune thoracic dystrophy paternal 3 160280770 ACTTTGGCATGGAACGATACATGCAATATCCTTTGTGGACTTCAAGATACTCGATTTATAG 74315329 22988 NM_000261.1(MYOC):c.1102C>T (p.Gln368Ter) MYOC Jun 14, 2016 Human Phenotype Ontology:HP:0012108,MedGen:C0339573,OMIM:137760,SNOMED CT:77075001;MedGen:C1842028,OMIM:137750 Primary open angle glaucoma;Primary open angle glaucoma juvenile onset 1 germline 1 171636338 AAGGAAATCCCTGGAGCTGGCTACCACGGACAGTTCCCGTATTCTTGGGGTGGCTACACGG 794728865 196942 NM_198056.2(SCN5A):c.2575C>T (p.Gln859Ter) SCN5A Jul 10, 2017 MedGen:C1142166,Orphanet:ORPHA130,SNOMED CT:418818005;MedGen:C0035828,OMIM:192500,Orphanet:ORPHA101016,SNOMED CT:20852007;MedGen:CN517202 Brugada syndrome;Long QT syndrome 1;not provided germline 3 38585903 ATCGTGTTCATCTTTGCTGTGGTGGGCATGCAGCTCTTTGGCAAGAACTACTCGGAGCTGA 121918555 15464 NM_030773.3(TUBB1):c.952C>T (p.Arg318Trp) TUBB1 Jan 08, 2009 MedGen:C2751259,OMIM:613112 MACROTHROMBOCYTOPENIA, AUTOSOMAL DOMINANT, TUBB1-RELATED germline 20 59024379 GGCCGCTACCTCACAGTGGCCTGCATTTTCCGGGGCAAGATGTCCACCAAGGAAGTGGACC 751478142 226064 NM_004134.6(HSPA9):c.376C>T (p.Arg126Trp) HSPA9 Jul 12, 2017 MedGen:C4225180,OMIM:616854 Even-plus syndrome germline 5 138570994 ACATTTTATGCTACCAAGCGTCTCATTGGCCGGCGATATGATGATCCTGAAGTACAGAAAG 763191789 359822 NM_014251.2(SLC25A13):c.955C>T (p.Arg319Ter) SLC25A13 Dec 13, 2016 MedGen:C1997910,SNOMED CT:429735007;MedGen:CN517202 Citrin deficiency;not provided germline 7 96184990 GCAAAGCAGAAGGCCTCAGGTGATTCAGCTCGACCAGTTCTTCTACAAGTTGCAGAGTCGG 398123593 99553 NM_006920.4(SCN1A):c.4186C>T (p.Arg1396Ter) SCN1A May 09, 2013 MedGen:C1858673,OMIM:604403;MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002 Generalized epilepsy with febrile seizures plus, type 2;Severe myoclonic epilepsy in infancy germline 2 166002537 CTAAAACTAATAGAAAGAAATGAGACTGCTCGATGGAAAAATGTGAAAGTAAACTTTGATA 80358665 66295 NM_000059.3(BRCA2):c.4285C>T (p.Gln1429Ter) BRCA2 Sep 08, 2016 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome germline 13 32338640 AAAGATTTTGAGACTTCTGATACATTTTTTCAGACTGCAAGTGGGAAAAATATTAGTGTCG 776513864 426947 NM_001171.5(ABCC6):c.2293C>T (p.Arg765Trp) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16178920 GGAGGCCAGAAGCAGCGGCTGAGCCTGGCCCGGGCTGTATACAGAAAGGCAGCTGTGTACC 63749932 45234 NM_000251.2(MSH2):c.2038C>T (p.Arg680Ter) MSH2 Aug 23, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0009405,Orphanet:ORPHA443090;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:C2936783,OMIM:120435;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Hereditary nonpolyposis colon cancer;Lynch syndrome;Lynch syndrome I;not provided germline;unknown 2 47476399 CCCAATATGGGAGGTAAATCAACATATATTCGACAAACTGGGGTGATAGTACTCATGGCCC 267607210 21260 NM_004737.5(LARGE1):c.992C>T (p.Ser331Phe) LARGE1 Nov 01, 2008 MedGen:C3150414,OMIM:613154 Congenital muscular dystrophy-dystroglycanopathy with brain and eye anomalies, type A6 germline 22 33384205 AGAGGGAGCTCATGGGCATGCTCTCTACATCCTTAGCTGACCAGGTGAGTGGCCAGGTTCG 72558421 103170 NM_000531.5(OTC):c.643C>T (p.Leu215Phe) OTC - MedGen:CN517202 not provided unknown X 38403720 ATGATGAGCGCAGCGAAATTCGGAATGCACCTTCAGGCAGCTACTCCAAAGGTAGGGAAAC 376633424 205492 NM_001083961.1(WDR62):c.3304C>T (p.Gln1102Ter) WDR62 Oct 19, 2017 Human Phenotype Ontology:HP:0002269,MedGen:C1837249;MedGen:CN517202 Abnormality of neuronal migration;not provided germline;maternal 19 36102820 TTCTTCAACCCACGCCTGAGTATCTCCACGCAGTTCCTCTCAAGCCTCCAGAAGGCATCCA 774357869 214085 NM_005060.3(RORC):c.113C>T (p.Ser38Leu) RORC Aug 07, 2015 MedGen:C4225266,OMIM:616622,Orphanet:ORPHA477857 Immunodeficiency 42 germline 1 151817238 TGATCCCTTGCAAAATCTGTGGGGACAAGTCGTCTGGGATCCACTACGGGGTTATCACCTG 104894925 25584 NM_006915.2(RP2):c.76C>T (p.Gln26Ter) RP2 Aug 01, 1998 MedGen:C2681923,OMIM:312600 Retinitis pigmentosa 2 germline X 46837176 CGGCCCGAGAACGAGGAGGAGCGGCCAAAGCAGTACAGCTGGGATCAGCGCGAGAAGGTAA 63751226 96577 NM_000251.2(MSH2):c.472C>T (p.Gln158Ter) MSH2 Sep 05, 2013 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Lynch syndrome germline 2 47410199 GTGGGTGTTAAAATGTCCGCAGTTGATGGCCAGAGACAGGTTGGAGTTGGGTATGTGGATT 63750291 96482 NM_000251.2(MSH2):c.2581C>T (p.Gln861Ter) MSH2 Sep 05, 2013 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Hereditary cancer-predisposing syndrome;Lynch syndrome germline 2 47480818 CTTGAGGAGTTTCAGTATATTGGAGAATCGCAAGGATATGATATCATGGAACCAGCAGCAA 1064796530 408711 NM_000020.2(ACVRL1):c.1027C>T (p.Gln343Ter) ACVRL1 Feb 20, 2017 MedGen:CN517202 not provided germline 12 51915479 AGCCGCAATGTGCTGGTCAAGAGCAACCTGCAGTGTTGCATCGCCGACCTGGGTGAGCCGG 756564767 202591 NM_000391.3(TPP1):c.379C>T (p.Arg127Ter) TPP1 Mar 30, 2015 MedGen:CN517202 not provided germline 11 6617627 CAGGACTTTCTGACTTGCTGGCTGAGCATCCGGTGAGAGGAAATGATTGCTCCATGGAGGG 63751310 95436 NM_000249.3(MLH1):c.1975C>T (p.Arg659Ter) MLH1 Apr 27, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0009405,Orphanet:ORPHA443090;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Hereditary nonpolyposis colon cancer;Lynch syndrome;not provided germline;unknown 3 37048595 CCTTTGGAGGGACTGCCTATCTTCATTCTTCGACTAGCCACTGAGGTCAGTGATCAAGCAG -1 431426 NM_002585.3(PBX1):c.550C>T (p.Arg184Ter) PBX1 Aug 25, 2017 MedGen:CN417140,OMIM:617641 CONGENITAL ANOMALIES OF KIDNEY AND URINARY TRACT SYNDROME WITH OR WITHOUT HEARING LOSS, ABNORMAL EARS, OR DEVELOPMENTAL DELAY germline 1 164799738 GAGTTCACCACCCACGTGATGAATCTCCTGCGAGAGCAAAGCCGGACCAGGCCCATCTCCC 374419983 200792 NM_201384.2(PLEC):c.46C>T (p.Arg16Ter) PLEC Jun 01, 2015 MedGen:C4225309,OMIM:616487 Epidermolysis bullosa simplex with nail dystrophy germline 8 143939416 CTCCGCGTGCCGCAGCCCGAGGGCCTGGGCCGAAAGAGAACCAGCTCGGAGGACAACCTGT 80358806 66601 NM_000059.3(BRCA2):c.5773C>T (p.Gln1925Ter) BRCA2 Mar 28, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome germline 13 32340128 ACGCATTCACATAAGGTTTTTGCTGACATTCAGAGTGAAGAAATTTTACAACATAACCAAA 373525781 464682 NM_000057.3(BLM):c.1933C>T (p.Gln645Ter) BLM Jul 27, 2017 MedGen:C0005859,OMIM:210900,Orphanet:ORPHA125,SNOMED CT:4434006;MedGen:C0027672,SNOMED CT:699346009 Bloom syndrome;Hereditary cancer-predisposing syndrome germline 15 90763016 GCATCCAGAAATCTGAAACATGAGCGTTTCCAAAGTCTTAGTTTTCCTCATACAAAGGAAA -1 456381 NM_001458.4(FLNC):c.7294C>T (p.Gln2432Ter) FLNC Jul 27, 2017 MedGen:CN239310 Dilated Cardiomyopathy, Dominant germline 7 128856560 AAGGTGAACCAGCCAGCGTCCTTTGCCGTGCAGCTGAACGGTGCCCGGGGCGTGATTGATG 104894237 23714 NM_000525.3(KCNJ11):c.761C>T (p.Pro254Leu) KCNJ11 Dec 01, 2004 MedGen:C0027773,OMIM:601820,SNOMED CT:42681006 Islet cell hyperplasia germline 11 17387331 TGGGTGGCAACAGCATCTTCCTGGTGGCCCCGCTGATCATCTACCATGTCATTGATGCCAA 387907002 39715 NM_133261.2(GIPC3):c.565C>T (p.Arg189Cys) GIPC3 Dec 01, 2011 MedGen:C1866094,OMIM:601869 Deafness, autosomal recessive 15 germline 19 3586967 GAGCTGCCCAAGTCCCAGCCCTTCACCCTGCGCCTGGTGCAGCCCAAGAGGGCCTTCGGTG 863223953 211619 NM_012062.4(DNM1L):c.1207C>T (p.Arg403Cys) DNM1L Sep 27, 2017 MedGen:C3280660,OMIM:614388,Orphanet:ORPHA330050;MedGen:CN517202 Encephalopathy due to defective mitochondrial and peroxisomal fission 1;not provided de novo;germline 12 32731362 GAGTTCTAAGTTTTATTTTCTCAGGGTCCTCGTCCTGCTTTATTTGTGCCTGAGGTTTCAT 796065343 204572 NM_156039.3(CSF3R):c.1853C>T (p.Thr618Ile) CSF3R Dec 26, 2014 Human Phenotype Ontology:HP:0004808,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:ORPHA519,SNOMED CT:17788007;Human Phenotype Ontology:HP:0005506,MeSH:D015464,MedGen:C0023473,OMIM:608232,Orphanet:ORPHA521;MedGen:CN232350 Acute myeloid leukemia;Chronic myeloid leukemia;Early T cell progenitor acute lymphoblastic leukemia somatic 1 36467833 CCACCAACAGTACAGTCCTCACCCTGATGACCTTGACCCCAGGTAAGGGGAGACGGGGGCT 267607173 15150 NM_022067.3(VIPAS39):c.535C>T (p.Gln179Ter) VIPAS39 Apr 01, 2010 MedGen:C3150672,OMIM:613404 Arthrogryposis, renal dysfunction, and cholestasis 2 germline 14 77444311 GTTTGCTCACTAGAGAGATTCCGCTCCTTACAGGACAAACTACAACTCCTAGAAGAGGCAG 59885338 29537 NM_170707.3(LMNA):c.892C>T (p.Arg298Cys) LMNA Apr 30, 2015 MedGen:C0007959,Orphanet:ORPHA166,SNOMED CT:50548001;MedGen:C1854154,OMIM:605588,Orphanet:ORPHA98856;MedGen:CN517202 Charcot-Marie-Tooth disease;Charcot-Marie-Tooth disease type 2B1;not provided germline 1 156135268 GCCCACGAGGAGCTGCAGCAGTCGCGCATCCGCATCGACAGCCTCTCTGCCCAGCTCAGCC 797046101 209077 NM_007075.3(WDR45):c.400C>T (p.Arg134Ter) WDR45 Dec 01, 2016 MedGen:CN233043;MedGen:C3550973,OMIM:300894,Orphanet:ORPHA329284;MedGen:CN517202 Neurodegeneration with brain iron accululation 5;Neurodegeneration with brain iron accumulation 5;not provided germline X 49076469 ATCTATGTGTACTCCTTCCCCGACAATCCCCGAAAGCTGTTTGAGTTTGATACCCGGGACA 104893707 23384 NM_000388.3(CASR):c.553C>T (p.Arg185Ter) CASR Aug 01, 1997 MedGen:C1832615,OMIM:239200,Orphanet:ORPHA417 Neonatal severe hyperparathyroidism germline 3 122261588 AGCAACAAGAATCAATTCAAGTCTTTCCTCCGAACCATCCCCAATGATGAGCACCAGGCCA 886039402 259877 NM_194456.1(KRIT1):c.1267C>T (p.Arg423Ter) KRIT1 May 23, 2017 MedGen:C1861784,OMIM:116860;MedGen:CN517202 Cerebral cavernous malformation;not provided germline 7 92222966 AGTTATCGTTTCTTGTAGTATGAAAAAGTTCGAATATACAGAATGGATGGGTCATATCGTT 397507912 234931 NM_000059.3(BRCA2):c.7366C>T (p.Gln2456Ter) BRCA2 Feb 10, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 2;Hereditary cancer-predisposing syndrome germline;unknown 13 32355219 AAAAATAAGATTAATGACAATGAGATTCATCAGTTTAACAAAAACAACTCCAATCAAGCAG 137853926 34286 NM_004750.4(CRLF1):c.538C>T (p.Gln180Ter) CRLF1 Mar 03, 2011 MedGen:C1848947,OMIM:272430 Cold-induced sweating syndrome 1 not provided 19 18598591 TCGCCCTCCCATCCCCGCAGGTGGTATGGCCAGGACAACACATGTGAGGAGTACCACACAG 121918195 16197 NM_001166686.1(PFKM):c.496C>T (p.Arg166Ter) PFKM Oct 24, 1995 MedGen:C0017926,OMIM:232800,Orphanet:ORPHA371,SNOMED CT:89597008 Glycogen storage disease, type VII germline 12 48132913 GGAAGTGCCCGGTGCAAGGACTTTCGGGAACGAGAAGGACGACTCCGAGCTGCCTACAACC 121434283 18638 NM_000016.5(ACADM):c.362C>T (p.Thr121Ile) ACADM Jul 24, 2017 MedGen:C0220710,OMIM:201450,Orphanet:ORPHA42,SNOMED CT:128596003;MedGen:CN517202 Medium-chain acyl-coenzyme A dehydrogenase deficiency;not provided germline 1 75733603 AATTGGCTTATGGATGTACAGGGGTTCAGACTGCTATTGAAGGAAATTCTTTGGGGGTAAG 387906970 39615 NM_001254729.1(AP4S1):c.124C>T (p.Arg42Ter) AP4S1 Jun 10, 2011 MedGen:C3279743,OMIM:614067 Spastic paraplegia 52, autosomal recessive germline 14 31066320 GAAACAGAAGTCATAAAGAGCTGTCTCTCTCGATCCAATGAACAAGTAAGTCTCTGGTTCT 28935474 26567 NM_000047.2(ARSE):c.1732C>T (p.Pro578Ser) ARSE Nov 03, 2011 MedGen:C1844853,OMIM:302950,Orphanet:ORPHA79345 Chondrodysplasia punctata 1, X-linked recessive germline X 2934870 CCGTGGCTGCAGCCCTGCTGTGGCCCGTTCCCCCTCTGCTGGTGCCTTAGGGAAGATGACC 121908299 19347 NM_001005741.2(GBA):c.481C>T (p.Pro161Ser) GBA Jun 15, 1993 MedGen:C1961835,OMIM:230800,SNOMED CT:62201009 Gaucher's disease, type 1 germline 1 155238624 GTAGGAATCGGATATAACATCATCCGGGTACCCATGGCCAGCTGTGACTTCTCCATCCGCA -1 424469 NM_172079.2(CAMK2B):c.85C>T (p.Arg29Ter) CAMK2B Dec 08, 2017 Human Phenotype Ontology:HP:0001249,MedGen:C1843367;MedGen:CN679648,OMIM:617799 Intellectual disability;MENTAL RETARDATION, AUTOSOMAL DOMINANT 54 de novo;germline 7 44284206 TTCCTCCCCAGGGGGGCTTTCTCTGTGGTCCGACGCTGTGTCAAGCTCTGCACCGGCCATG 28933376 28756 NM_001083116.2(PRF1):c.1304C>T (p.Thr435Met) PRF1 Mar 15, 2003 MedGen:C1863727,OMIM:603553 Hemophagocytic lymphohistiocytosis, familial, 2 germline 10 70598417 GGGGCCTGTGGGGGGACTGGTTCACTGCCACGGATGCCTATGTGAAGCTCTTCTTTGGTGG 794726766 187811 NM_001165963.1(SCN1A):c.2303C>T (p.Pro768Leu) SCN1A Dec 20, 2014 MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002 Severe myoclonic epilepsy in infancy de novo 2 166041343 AACATGTTGTCAACCTGGTTGTGATGGACCCATTTGTTGACCTGGCCATCACCATCTGTAT 879254802 246006 NM_000527.4(LDLR):c.1132C>T (p.Gln378Ter) LDLR Mar 25, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11111585 TGCGTGAACCTGGAGGGTGGCTACAAGTGCCAGTGTGAGGAAGGCTTCCAGCTGGACCCCC 137853041 21917 NM_003816.2(ADAM9):c.490C>T (p.Arg164Ter) ADAM9 Nov 03, 2016 MedGen:C1423873,OMIM:612775;MedGen:CN517202 Cone-rod dystrophy 9;not provided germline 8 39017298 AACAGCTCTCATTTTGAGCACATCATTTATCGAATGGATGATGTCTACAAAGAGCCTCTGA 80359180 24386 NM_000059.3(BRCA2):c.9196C>T (p.Gln3066Ter) BRCA2 Jul 31, 2017 MedGen:C2676676,OMIM:604370;MedGen:C2675520,OMIM:612555;MedGen:C1838457,OMIM:605724,Orphanet:ORPHA319462;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 1;Breast-ovarian cancer, familial 2;Fanconi anemia, complementation group D1;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline;unknown 13 32380085 CACTTCAGCAAATTTTTAGATCCAGACTTTCAGCCATCTTGTTCTGAGGTGGACCTAATAG 778377449 399125 NM_139241.3(FGD4):c.1729C>T (p.Arg577Ter) FGD4 Aug 07, 2016 MedGen:CN043578 Charcot-Marie-Tooth disease, type IV germline 12 32625747 AAATGTAAAGAACCTTTCAATGCACTGACACGAAGGAGGCATCATTGTCGAGCATGTGGAT 398123712 100057 NM_003482.3(KMT2D):c.12430C>T (p.Gln4144Ter) KMT2D May 07, 2013 MedGen:CN030661,OMIM:147920 Kabuki syndrome 1 germline 12 49032275 CTGGCTCAGCCCTCTGTTTCCTTAGGGGATCAGCCTGGGTCCATGACCCAGAACCTTCTGG 762811727 485927 NM_024079.4(ALG8):c.535C>T (p.Arg179Ter) ALG8 Feb 21, 2018 MedGen:CN818986,OMIM:617874 POLYCYSTIC LIVER DISEASE 3 WITH OR WITHOUT KIDNEY CYSTS germline 11 78119193 TTATTTGGATTAATGCTACTCTCCATTGCACGATTATTTCAGGTAAACATAATTGTTTAAT 137852962 19590 NM_153638.3(PANK2):c.856C>T (p.Arg286Cys) PANK2 Aug 01, 2001 MedGen:C0018523,OMIM:234200,Orphanet:ORPHA157850,SNOMED CT:2992000 Pigmentary pallidal degeneration germline 20 3908153 TGTGGACGCAAAGGCAATCTGCACTTTATACGCTTTCCCACTCATGACATGCCTGCTTTTA 72650699 360232 NM_001171.5(ABCC6):c.1132C>T (p.Gln378Ter) ABCC6 Feb 08, 2016 MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005;MedGen:CN517202 Pseudoxanthoma elasticum;not provided germline 16 16202045 CAGCAGAACATGTACAGGCTCAAGGTGCTGCAGATGAGGTTGCGGTCGGCCATCACTGGCC 779315456 377194 NM_000159.3(GCDH):c.937C>T (p.Arg313Trp) GCDH Apr 06, 2015 MedGen:CN517202 not provided germline 19 12896994 GGAGCTTCGGAGTTCTGCTTGCACACAGCCCGGCAGTACGCCCTCGACAGGTGTGTGAGGG 121913550 29403 NM_000302.3(PLOD1):c.955C>T (p.Arg319Ter) PLOD1 Jan 04, 2013 MedGen:C0268342,OMIM:225400,Orphanet:ORPHA1900,SNOMED CT:25606004 Ehlers-Danlos syndrome, hydroxylysine-deficient germline 1 11958627 CTGCGGCTCCACTACCCCCAGAAACACATGCGACTTTTCATCCACAACCACGTGAGTAACA 118203948 15898 NM_013319.2(UBIAD1):c.524C>T (p.Thr175Ile) UBIAD1 Feb 01, 2008 Human Phenotype Ontology:HP:0007760,MedGen:C0271287,OMIM:121800,Orphanet:ORPHA98967,SNOMED CT:39662004,SNOMED CT:419395007 Schnyder crystalline corneal dystrophy germline 1 11274055 TTGGAGGCCTGTCTGGCTCCTTTCTCTACACAGGAGGTAAGATTTGGCCTGTCCTGTGTGC 137852727 76645 NM_024757.4(EHMT1):c.3589C>T (p.Arg1197Trp) EHMT1 Oct 05, 2010 MedGen:C0795833,OMIM:610253,Orphanet:ORPHA261494 Chromosome 9q deletion syndrome not provided 9 137834397 ATCGACGCGCGGTTCTACGGGAACGTCAGCCGGTTCATCAACCACCACTGCGAGCCCAACC -1 446049 NM_001127221.1(CACNA1A):c.4075C>T (p.Arg1359Trp) CACNA1A Jul 17, 2017 MedGen:CN517202 not provided germline 19 13262751 CGGGTGCTACGACCTCTTAAAACCATCAAGCGGCTGCCAAAGCTCAAGGTGAGATTGGGAG 373180788 444256 NM_004260.3(RECQL4):c.517C>T (p.Gln173Ter) RECQL4 Jul 06, 2017 MedGen:CN517202 not provided germline 8 144516602 CCTGAGCCCCAGCCAAGGCCAGGCCGGCTCCAGCATCTGCAGGCATCCCTGAGCCAGCGGC 776127501 214058 NM_020041.2(SLC2A9):c.511C>T (p.Arg171Cys) SLC2A9 Mar 01, 2012 MedGen:C2677549,OMIM:612076 Renal hypouricemia 2 germline 4 9985693 GCAGGAGCCTTTGAAATGCTCATCGTGGGACGCTTCATCATGGGCATAGATGGAGGTGAGA 104894145 16838 NM_000102.3(CYP17A1):c.1283C>T (p.Pro428Leu) CYP17A1 Dec 01, 2003 MedGen:CN042980 Complete combined 17-alpha-hydroxylase/17,20-lyase deficiency germline 10 102830946 TGAATCCAGCGGGGACCCAGCTCATCTCACCGTCAGTAAGCTATTTGCCCTTCGGAGCAGG 886041522 264396 NM_015046.5(SETX):c.4936C>T (p.Gln1646Ter) SETX Jan 26, 2016 MedGen:CN517202 not provided germline 9 132326662 AAAGTACCACAGCCAGTTCCCCTCATAGCTCAGAAGCCAGTTGGTGAAATGAAGAATTCGT 80357471 69016 NM_007294.3(BRCA1):c.178C>T (p.Gln60Ter) BRCA1 Apr 22, 2016 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145;MedGen:CN517202 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome;not provided germline 17 43106490 AAACTTCTCAACCAGAAGAAAGGGCCTTCACAGTGTCCTTTATGTAAGAATGATATAACCA 201405662 269860 NM_001023570.3(IQCB1):c.214C>T (p.Arg72Ter) IQCB1 Jan 05, 2016 MeSH:D057130,MedGen:C0339527,Orphanet:ORPHA65,SNOMED CT:193413001;MedGen:C1836517,OMIM:609254 Leber congenital amaurosis;Senior-Loken syndrome 5 germline;unknown 3 121828519 TGCCTCTTGGTCCTCAGTCAAGATTATTCTCGAATCCAGGGTGGTTGGACTACAATTTCCC -1 439232 NM_015909.3(NBAS):c.2167C>T (p.Gln723Ter) NBAS Mar 29, 2017 MedGen:CN517202 not provided germline 2 15461722 GATGCTGAATTCTTTAAGAAATTCAGAAATCAGAATATTGTTCTCTCAGCAAGAACTTATG 587783158 166545 NM_003159.2(CDKL5):c.2596C>T (p.Gln866Ter) CDKL5 Nov 16, 2012 MedGen:C1839333,OMIM:300672;MedGen:CN517202 Early infantile epileptic encephalopathy 2;not provided germline X 18628470 GATCCCCGCTTCCAGCCCTTAACAGCTCAACAAACCAAAAATTCCTTCTCAGAAATTCGGA 28939684 22424 NM_172107.3(KCNQ2):c.640C>T (p.Arg214Trp) KCNQ2 Mar 31, 2016 MedGen:C1852587,OMIM:121200 Benign familial neonatal seizures 1 germline 20 63444709 CAGATTCTGCGGATGATCCGCATGGACCGGCGGGGAGGCACCTGGAAGCTGCTGGGCTCTG 121434359 16987 NM_030957.3(ADAMTS10):c.952C>T (p.Gln318Ter) ADAMTS10 Dec 01, 2008 MedGen:C1869114,OMIM:277600 Weill-Marchesani syndrome 1 germline 19 8597075 GGGAAGTCCCTGGACAGCTTCTGTAAGTGGCAGAAATCCATCGTGAACCACAGCGGCCATG 587777593 152759 NM_025150.4(TARS2):c.845C>T (p.Pro282Leu) TARS2 Aug 01, 2014 MedGen:C4014668,OMIM:615918,Orphanet:ORPHA420733 Combined oxidative phosphorylation deficiency 21 germline 1 150496552 CACTGCAGAGAGTGTCAGGGATTTCCTTCCCCACAACAGAATTGCTGAGGGTCTGGGAAGC 879253867 244154 NM_001142415.1(AIMP1):c.334C>T (p.Gln112Ter) AIMP1 Aug 18, 2015 MedGen:C1850053,OMIM:260600,Orphanet:ORPHA280293 Leukodystrophy, hypomyelinating 3 inherited 4 106328186 GTAACAACCGTATCTTCTGGTACCAAAGAACAGATAAAAGGAGGAACAGGAGACGAAAAGA 748294403 421442 NM_001904.3(CTNNB1):c.1981C>T (p.Arg661Ter) CTNNB1 Oct 02, 2015 MedGen:CN517202 not provided germline 3 41236614 TTAGCGACATATGCAGCTGCTGTTTTGTTCCGAATGTCTGAGGACAAGCCACAAGATTACA 864621971 204430 NM_002968.2(SALL1):c.949C>T (p.Pro317Ser) SALL1 Apr 01, 2015 MedGen:CN034849,OMIM:107480 Townes-Brocks syndrome 1 germline 16 51141273 TCTGCCAGCATTAGTGGTGTGAAACAGCTACCCCCAATCCAGCTACCTCAGAGCAGTTCTG 374144275 214197 NM_023073.3(CPLANE1):c.9058C>T (p.Arg3020Ter) CPLANE1 Jan 16, 2017 MedGen:C3553264,OMIM:614615;MedGen:CN517202 Joubert syndrome 17;not provided germline;unknown 5 37120306 AATCAACATGGTCACAGTTTTCTAATAAATCGACCTGGAAAAGTCAAATATATGTCCAAAC 137853860 34024 NM_000403.3(GALE):c.715C>T (p.Arg239Trp) GALE Mar 18, 2016 MedGen:C0751161,OMIM:230350,Orphanet:ORPHA79238,SNOMED CT:8849004 UDPglucose-4-epimerase deficiency germline 1 23796777 ATCCAACACACTCCCTTCTCTGCAGGTGTCCGGGATTACATCCATGTCGTGGATCTGGCCA 74315504 18334 NM_000268.3(NF2):c.1396C>T (p.Arg466Ter) NF2 Aug 01, 1994 MedGen:C0027832,OMIM:101000,Orphanet:ORPHA637,SNOMED CT:92503002 Neurofibromatosis, type 2 germline 22 29674891 CAGGACCTGCAGGAAGCACGCGAGGCGGAGCGAAGAGCCAAGCAGAAGCTCCTGGAGATTG 1057524114 373286 NM_001844.4(COL2A1):c.2818C>T (p.Arg940Ter) COL2A1 Jan 05, 2017 MedGen:CN517202 not provided germline 12 47978674 GGTGCTCGAGGAGACAGCGGCCCCCCTGGCCGAGCTGGTGAACCCGGCCTCCAAGGTCCTG 121908070 19182 NM_022455.4(NSD1):c.3958C>T (p.Arg1320Ter) NSD1 Feb 16, 2017 MedGen:CN035106,OMIM:117550;MedGen:CN517202 Sotos syndrome 1;not provided germline 5 177238273 TCCCGCTGTGAAGAGGAAAGCCTTCTAGCCCGAGGTCGATCTAGTGCTCAGAACAAGCAGG 121909642 31339 NM_023110.2(FGFR1):c.2164C>T (p.Pro722Ser) FGFR1 Oct 01, 2006 MedGen:C4016104 Hypogonadotropic hypogonadism 2 with anosmia germline 8 38414174 CTGCTGAAGGAGGGTCACCGCATGGACAAGCCCAGTAACTGCACCAACGAGCTGTAAGCCC 749479682 406486 NM_000038.5(APC):c.583C>T (p.Gln195Ter) APC Nov 10, 2016 MedGen:CN517202 not provided germline 5 112780841 ACCAGAAGGCAATTGGAATATGAAGCAAGGCAAATCAGAGTTGCGATGGAAGAACAACTAG 387906642 38725 NM_004523.3(KIF11):c.2830C>T (p.Arg944Cys) KIF11 Feb 10, 2012 MedGen:C1835265,OMIM:152950,Orphanet:ORPHA2526 Microcephaly with or without chorioretinopathy, lymphedema, or mental retardation germline 10 92649894 TACCCATCAACACTGGTAAGAACTGAACCACGTGAACATCTCCTTGATCAGCTGAAAAGGA 769086289 408541 NM_000545.6(HNF1A):c.685C>T (p.Arg229Ter) HNF1A Mar 13, 2017 MedGen:CN517202 not provided germline 12 120993678 GAGAGGCAGAAGAACCCTAGCAAGGAGGAGCGAGAGACGCTAGTGGAGGAGTGCAATAGGT 141458677 431496 NM_001127182.1(CEP55):c.256C>T (p.Arg86Ter) CEP55 Aug 28, 2017 MedGen:C1856053,OMIM:236500 Hydranencephaly with renal aplasia-dysplasia germline 10 93503185 CAACTCACAGAGAAGGACAAAGAAATACAGCGACTGAGAGACCAACTGAAGGCCAGATATA 121918048 28539 NM_002693.2(POLG):c.2794C>T (p.His932Tyr) POLG Jan 27, 2004 MedGen:C1843851,OMIM:607459,Orphanet:ORPHA70595 Sensory ataxic neuropathy, dysarthria, and ophthalmoparesis germline 15 89320953 CAGGGCAGGAAGAGCAGGGGCACTGATCTACACAGTAAGACAGCCACTACTGTGGGCATCA 121912886 32424 NM_001844.4(COL2A1):c.4316C>T (p.Thr1439Met) COL2A1 Sep 15, 2014 Human Phenotype Ontology:HP:0002655,MedGen:C0038015,OMIM:183900,Orphanet:ORPHA253;MedGen:C0796173,OMIM:271700,Orphanet:ORPHA1856 Spondyloepiphyseal dysplasia congenita;Spondyloperipheral dysplasia germline 12 47974090 TCACGTACACTGCCCTGAAGGATGGCTGCACGGTGAGTGGGGCTGCCAGAGAGAAGAGCTG 1057517785 359933 NM_000280.4(PAX6):c.949C>T (p.Arg317Ter) PAX6 Jun 03, 2017 MedGen:C0344542,OMIM:106210;Human Phenotype Ontology:HP:0000659,MedGen:C0344559,OMIM:604229,SNOMED CT:204153003;MedGen:CN517202 Aniridia 1;Irido-corneo-trabecular dysgenesis;not provided germline 11 31793521 TCCTCCTTCACATCTGGCTCCATGTTGGGCCGAACAGACACAGCCCTCACAAACACCTACA 137852443 25314 NM_000132.3(F8):c.5398C>T (p.Arg1800Cys) F8 Jan 01, 1992 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154904999 CTACAGGTAACTTTCAGAAATCAGGCCTCTCGTCCCTATTCCTTCTATTCTAGCCTTATTT 104894660 18304 NM_000529.2(MC2R):c.409C>T (p.Arg137Trp) MC2R Apr 16, 2008 MedGen:C4049650,OMIM:202200;MedGen:C1955741 ACTH resistance;Glucocorticoid Deficiency germline 18 13885110 GACCGCTACATCACCATCTTCCACGCACTGCGGTACCACAGCATCGTGACCATGCGCCGCA 80338773 15893 NM_080669.5(SLC46A1):c.1126C>T (p.Arg376Trp) SLC46A1 Dec 08, 2011 MedGen:C0342705,OMIM:229050,Orphanet:ORPHA90045,SNOMED CT:62578003;MedGen:CN517202 Congenital defect of folate absorption;not provided germline 17 28402277 TTCCTGTCATTAGTCATCACACCTGTCATCCGGGCTAAACTCTCCAAGCTGGTGAGAGAGA 775136381 367721 NM_032682.5(FOXP1):c.1489C>T (p.Arg497Ter) FOXP1 Mar 19, 2017 MedGen:CN517202 not provided germline 3 70976982 ACACTAAATGAGATCTATAACTGGTTCACACGAATGTTTGCTTACTTCCGACGCAACGCGG 387907349 51197 NM_001130004.1(ACTN1):c.2212C>T (p.Arg738Trp) ACTN1 Mar 07, 2013 MedGen:C3554663,OMIM:615193 Platelet-type bleeding disorder 15 germline 14 68880030 ATCAATGAGGTAGAGAACCAGATCCTGACCCGGGATGCCAAGGGCATCAGCCAGGAGCAGA 200585917 45860 NM_001271620.2(ZNF423):c.2558C>T (p.Pro853Leu) ZNF423 Oct 08, 2012 MedGen:C3539071,OMIM:614844 Nephronophthisis 14 germline 16 49636414 ATCACCGGCTGCGGGACCACAATATCCGGCCGGGCGAGGATGATGGCTCACGCAAGAAGGC 121908760 68108 NM_000492.3(CFTR):c.2125C>T (p.Arg709Ter) CFTR Jun 23, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline;unknown 7 117592292 AATTCTATTCTCAATCCAATCAACTCTATACGAAAATTTTCCATTGTGCAAAAGACTCCCT 138226428 240444 NM_138361.5(LRSAM1):c.1279C>T (p.Arg427Ter) LRSAM1 Dec 08, 2016 Gene:431712,MedGen:C3280797,OMIM:614436,Orphanet:ORPHA300319 Charcot-Marie-Tooth disease type 2P germline 9 127487695 CTTTCTGGCAGCATGGCCGAAATGGATGAACGATTCCAGCAGATTCTGTCGTGGCAGCAAA -1 425753 NM_000168.5(GLI3):c.2071C>T (p.Gln691Ter) GLI3 May 22, 2017 MedGen:CN517202 not provided germline 7 41972369 AACACTACCTCAAAGCGGGAAGAATGCCTCCAGGTGAAAACCGTCAAGGCAGAGAAGCCAA -1 432084 NM_014112.4(TRPS1):c.1093C>T (p.Gln365Ter) TRPS1 Jan 24, 2017 MedGen:C0432233,OMIM:190350,SNOMED CT:254091006 Trichorhinophalangeal dysplasia type I germline 8 115604876 TATATGGGCAACTCATCCACCGAATTAGAACAACATTTTCTTCAGACTCACCCAAACAAAA 121908053 18703 NM_000229.1(LCAT):c.1112C>T (p.Thr371Met) LCAT Feb 01, 1992 MedGen:C0342895,OMIM:136120,Orphanet:ORPHA79292,SNOMED CT:238092004 Fish-eye disease germline 16 67940115 TGGGTGTGCTCTATGAGGATGGTGATGACACGGTGGCGACCCGCAGCACCGAGCTCTGTGG 121917902 16742 NM_000124.3(ERCC6):c.1357C>T (p.Arg453Ter) ERCC6 Jul 29, 2013 MedGen:C0751038,OMIM:133540,Orphanet:ORPHA90322 Cockayne syndrome B germline 10 49524073 GGAGGAGGAGGTCGGAAAGTGGGAAGATACCGAGATGATGGAGATGAAGATTATTATAAGC 74315472 18114 NM_000487.5(ARSA):c.827C>T (p.Thr276Met) ARSA Mar 23, 2017 MedGen:C0023522,OMIM:250100,Orphanet:ORPHA512,SNOMED CT:396338004;MedGen:C4017094 Metachromatic leukodystrophy;Metachromatic leukodystrophy, severe germline;unknown 22 50626618 CCATAGGGGACCTGGGGCTGCTTGAAGAGACGCTGGTCATCTTCACTGCAGACAATGGGTA 121918522 25837 NM_015107.2(PHF8):c.631C>T (p.Arg211Ter) PHF8 Oct 01, 2005 MedGen:C1846055,OMIM:300263,Orphanet:ORPHA85287 Siderius X-linked mental retardation syndrome germline X 54014529 TCTAACCTTGTGGAGACACCGAAGATTGTTCGAAAGCTGTCATGGGTCGAAAACTTGTGGC 775931992 441911 NM_000339.2(SLC12A3):c.1195C>T (p.Arg399Cys) SLC12A3 Apr 10, 2015 MedGen:CN517202 not provided germline 16 56879087 TCCTTCCTCCTCTCAGGCTCCTGCGTGGTGCGTGATGCCTCTGGGGTCCTGAATGACACAG 118203988 16337 NM_001042702.3(PJVK):c.161C>T (p.Thr54Ile) PJVK Jul 01, 2006 MedGen:C1857744,OMIM:610220 Deafness, autosomal recessive 59 germline 2 178453570 TTCTGTTTCCTAGATATAAATTTACTTCAACACCTTTTACACTGAAAGATATTCTCCTAGG 587783475 169248 NM_004380.2(CREBBP):c.2791C>T (p.Gln931Ter) CREBBP Feb 08, 2013 MedGen:C0035934,OMIM:180849,Orphanet:ORPHA353277,SNOMED CT:45582004 Rubinstein-Taybi syndrome germline 16 3770659 GCAGCCCAGGCCCAGGTGACCCCGCAGCCTCAAACCCCAGTTCAGCCCCCGTCTGTGGCTA 774809466 464463 NM_015346.3(ZFYVE26):c.4132C>T (p.Arg1378Ter) ZFYVE26 Jun 27, 2017 MedGen:C0037772 Spastic paraplegia germline 14 67783020 GCCTTCCTCCTGGCTGCCTGGGAGCCCCTGCGAGGGTCTTTGCAGCAGGGGCAGAGTCTGG 794728057 196820 NM_000090.3(COL3A1):c.4072C>T (p.Arg1358Ter) COL3A1 Aug 25, 2014 MedGen:CN517202 not provided germline 2 189010708 GATGTCCTTGATGTGCATCTGGCATTCCTTCGACTTCTCTCCAGCCGAGCTTCCCAGAACA 33944208 30499 NM_000518.4(HBB):c.-50-88C>T HBB Jun 30, 2017 MedGen:C0472767,Orphanet:ORPHA231222,SNOMED CT:191189009;MedGen:C3841475;MedGen:C0005283,OMIM:613985,Orphanet:ORPHA848,SNOMED CT:65959000;MedGen:CN517202 Beta thalassemia intermedia;Beta-plus-thalassemia;beta Thalassemia;not provided germline;unknown 11 5227159 ATCACTTAGACCTCACCCTGTGGAGCCACACCCTAGGGTTGGCCAATCTACTCCCAGGAGC 757318536 364416 NM_019032.5(ADAMTSL4):c.421C>T (p.Arg141Ter) ADAMTSL4 Jan 10, 2017 MedGen:CN517202 not provided germline 1 150553240 CACCTAGGGAGAGAGGAGACCCAGGAGATTCGAGCGGCCAGGAGGTGAGAGGCCTGGGTGG 119473035 19212 NM_014140.3(SMARCAL1):c.100C>T (p.Gln34Ter) SMARCAL1 Feb 01, 2002 MedGen:C0877024,OMIM:242900,Orphanet:ORPHA1830 Schimke immunoosseous dysplasia germline 2 216414804 AGAGCTGAGAAGTTATTGGCAGAACAGCATCAGAGGACTAGCTCGGGCACCTCCATTGCTG 193922836 28030 NM_000540.2(RYR1):c.10343C>T (p.Ser3448Phe) RYR1 Dec 27, 2005 Human Phenotype Ontology:HP:0003789,MedGen:C1850674,OMIM:255320,Orphanet:ORPHA98905;MedGen:CN517202 Minicore myopathy;not provided germline;unknown 19 38523111 TGGGCGAGATCTTCATCTACTGGTCCAAGTCCCACGTGAGTGCCCACCCCAACCGCCCTCC 281865135 49655 NM_004862.3(LITAF):c.403C>T (p.Pro135Ser) LITAF Oct 18, 2012 MedGen:C0270913,OMIM:601098,Orphanet:ORPHA101083,SNOMED CT:4183003 Charcot-Marie-Tooth disease, type 1C not provided 16 11549720 CCCAGGTGCATAGCGGGCTGCTGCTTCATCCCCTTCTGCGTGGATGCCCTGCAGGACGTGG 121909501 27767 NM_001174136.1(TDGF1):c.326C>T (p.Pro109Leu) TDGF1 May 01, 2002 MedGen:C1861235 Forebrain defects germline 3 46579986 GTGGGTCTGTGCCCCATGACACCTGGCTGCCCAAGAAGTGTTCCCTGTGTAAATGCTGGCA 397515324 76338 NM_005850.4(SF3B4):c.1006C>T (p.Arg336Ter) SF3B4 Aug 01, 2013 Gene:171,MedGen:C0265245,OMIM:154400,SNOMED CT:35520007 Nager syndrome germline 1 149923922 CCCCCAGGCTCTGGGGGCCAGCCACCGCCCCGACCACCACCTGGAATGCCTCATCCTGGAC 376526037 421792 NM_000124.3(ERCC6):c.1834C>T (p.Arg612Ter) ERCC6 May 17, 2017 MedGen:CN517202 not provided germline 10 49483504 ATTTTATTGTGGTCTCAGGAGAAACTAATTCGAGATGTTGCTCATTGTCATGGAATTTTGA 1064795307 407120 NM_032415.5(CARD11):c.2923C>T (p.Arg975Trp) CARD11 Aug 22, 2017 MedGen:CN417134,OMIM:617638;MedGen:CN517202 IMMUNODEFICIENCY 11B WITH ATOPIC DERMATITIS;not provided germline 7 2913383 CTGGTACGCGCCTTCTACTGCGAGCGCCGCCGGCCCGTGCTCTTCACACCCACCGTGCTGG 144885874 21213 NM_004328.4(BCS1L):c.547C>T (p.Arg183Cys) BCS1L Sep 20, 2017 MedGen:C1852372,OMIM:124000;MedGen:CN517202 Mitochondrial complex III deficiency;not provided germline 2 218661845 GGCTCTGAATGGCGTCCCTTTGGCTATCCACGCCGCCGGCGACCACTGAATTCTGTGGTTC 119103276 17283 NM_000433.3(NCF2):c.298C>T (p.Gln100Ter) NCF2 Nov 01, 1999 MedGen:C1856245,OMIM:233710 Chronic granulomatous disease, autosomal recessive cytochrome b-positive, type 2 germline 1 183577667 GCTATCAAAGACCTTAAAGAAGCCTTGATTCAGCTTCGAGGGAACCAGCTGATAGACTATA 199472696 67726 NM_000218.2(KCNQ1):c.520C>T (p.Arg174Cys) KCNQ1 Jun 27, 2017 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MeSH:D008133,MedGen:C0023976,SNOMED CT:9651007;MedGen:C0035828,OMIM:192500,Orphanet:ORPHA101016,SNOMED CT:20852007;MedGen:CN517202 Congenital long QT syndrome;Long QT syndrome;Long QT syndrome 1;not provided germline 11 2570670 GTGGTGTTCTTCGGGACGGAGTACGTGGTCCGCCTCTGGTCCGCCGGCTGCCGCAGCAAGT 387906834 39207 NM_002241.4(KCNJ10):c.193C>T (p.Arg65Cys) KCNJ10 Jan 01, 2011 MedGen:C2748572,OMIM:612780,Orphanet:ORPHA199343 SeSAME syndrome germline 1 160042340 CTGTGGACAACCTTCATTGACATGCAGTGGCGCTACAAGCTTCTGCTCTTCTCTGCGACCT 769550316 431016 NM_000137.2(FAH):c.709C>T (p.Arg237Ter) FAH Jun 18, 2017 MedGen:C0268490,OMIM:276700,Orphanet:ORPHA882,SNOMED CT:124536006,SNOMED CT:410056006 Tyrosinemia type I inherited 15 80173016 AAGTCCTGGCTGTGCCCTTCTTCTGCAGCACGAGACATTCAGAAGTGGGAGTATGTCCCTC 769468125 424282 NM_000481.3(AMT):c.350C>T (p.Ser117Leu) AMT Jul 18, 2017 Human Phenotype Ontology:HP:0008288,MedGen:C0751748,OMIM:605899,Orphanet:ORPHA407,SNOMED CT:237939006 Non-ketotic hyperglycinemia germline 3 49420332 ACGCTCCACTTTGGTCCTAGGGGACACTGTCGCTGTTTACCAACGAGGCTGGAGGCATCTT 121917719 28828 NM_013953.3(PAX8):c.143C>T (p.Ser48Phe) PAX8 Jul 01, 2005 Human Phenotype Ontology:HP:0008188,MedGen:C1563716,OMIM:218700 Thyroid agenesis germline 2 113246802 CCCACCAGGGTGTAAGGCCCTGCGACATCTCTCGCCAGCTCCGCGTCAGCCATGGCTGCGT 886039386 260012 NM_000545.6(HNF1A):c.811C>T (p.Arg271Trp) HNF1A Jun 05, 2017 MedGen:CN517202 not provided germline 12 120994261 GAGGTGCGTGTCTACAACTGGTTTGCCAACCGGCGCAAAGAAGAAGCCTTCCGGCACAAGC 751710099 472515 NM_000465.3(BARD1):c.1843C>T (p.Gln615Ter) BARD1 Aug 04, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 2 214745127 ACTCATGTTGTTGTTCCTGGTGATGCAGTTCAAAGTACCTTGAAGTGTATGCTTGGGATTC 1136743 33147 NM_000331.5(SAA1):c.209C>T (p.Ala70Val) SAA1 Jun 01, 1995 na Serum amyloid a variant germline 11 18269312 ATGATGCTGCCAAAAGGGGACCTGGGGGTGCCTGGGCTGCAGAAGTGATCACGTAACTGGA 397514484 40565 NM_016569.3(TBX3):c.1051C>T (p.Gln351Ter) TBX3 Dec 01, 2009 MedGen:C1866994,OMIM:181450 Ulnar-mammary syndrome germline 12 114676361 AGTGAACAAGCAGCTTTCAACTGCTTCGCCCAGGCTTCTTCTCCAGCCGCCTCCACTGTAG 11549407 30441 NM_000518.4(HBB):c.118C>T (p.Gln40Ter) HBB Jun 21, 2017 MedGen:C0005283,OMIM:613985,Orphanet:ORPHA848,SNOMED CT:65959000;MedGen:C0271980,SNOMED CT:86715000;MedGen:CN517202;MedGen:CN169374 beta Thalassemia;beta^0^ Thalassemia;not provided;not specified germline;maternal;unknown 11 5226774 CTTAGGCTGCTGGTGGTCTACCCTTGGACCCAGAGGTTCTTTGAGTCCTTTGGGGATCTGT 137854613 24413 NM_198056.2(SCN5A):c.4867C>T (p.Arg1623Ter) SCN5A Sep 13, 2017 MedGen:CN221565;MedGen:C1859062,OMIM:603830;MedGen:C1837845,OMIM:608567;MedGen:CN517202 Arrhythmogenic right ventricular dysplasia/cardiomyopathy;Long QT syndrome 3;Sick sinus syndrome 1, autosomal recessive;not provided germline;paternal 3 38551505 CAGAAGTACTTCTTCTCCCCGACGCTCTTCCGAGTCATCCGCCTGGCCCGAATAGGCCGCA 1085307057 227353 NM_000053.3(ATP7B):c.2149C>T (p.Gln717Ter) ATP7B Mar 18, 2016 MedGen:C0019202,OMIM:277900,Orphanet:ORPHA905,SNOMED CT:88518009 Wilson disease germline 13 51958517 CAGCTCCTCGGTGGGTGGTACTTCTACGTTCAGGCCTACAAATCTCTGAGACACAGGTCAG 886039821 260583 NM_022068.3(PIEZO2):c.5053C>T (p.Arg1685Ter) PIEZO2 Dec 21, 2016 MedGen:C4310692,OMIM:617146 Arthrogryposis, distal, with impaired proprioception and touch germline 18 10715679 ATTGATATATCTACAGTTCTGAGAATTGAACGATGCATGCTGACCAGAGAAATTAAGAAGG 397514607 48417 NM_001277269.1(OTOG):c.6347C>T (p.Pro2116Leu) OTOG Nov 02, 2012 MedGen:C3554163,OMIM:614945 Deafness, autosomal recessive 18b germline 11 17612638 CCCCTCCCCCAGGCCGGTGCTCAATCTTCCCTGACCTGAGCTTCGTGACCTTCGATGGGAG 587783884 168339 NM_133433.3(NIPBL):c.1372C>T (p.Gln458Ter) NIPBL Feb 08, 2013 MedGen:CN029798,OMIM:122470 Cornelia de Lange syndrome 1 germline 5 36976279 CCCCAGACTTCTGTGGTACAGAATCAACAACAGATATCACAACAGGGACCTATATATGATG 886041919 264936 NM_000548.4(TSC2):c.4594C>T (p.Gln1532Ter) TSC2 Apr 24, 2017 MedGen:C1860707,OMIM:613254;MedGen:CN517202 Tuberous sclerosis 2;not provided germline 16 2085254 CCACAGTCACAGTCCTTTGAGCGGTCGGTGCAGCTCCTCGACCAGATCCCATCATACGACA -1 417141 NM_019098.4(CNGB3):c.265C>T (p.Gln89Ter) CNGB3 Mar 27, 2017 MedGen:C1849792,OMIM:262300 Achromatopsia 3 maternal 8 86726604 TCTGGAGATCTGACCACAAACCCTGACCCTCAAAATGCAGCAGAACCAACTGGAACAGTGC 1060502829 401360 NM_178452.5(DNAAF1):c.190C>T (p.Gln64Ter) DNAAF1 Feb 06, 2017 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244 Ciliary dyskinesia germline 16 84149072 TCTGACACATCCTACCACAGCCAGCAGAAACAGAGTGGTGATAATGGGTCAGGTGGTCACT 150518260 51200 NM_000232.4(SGCB):c.341C>T (p.Ser114Phe) SGCB Jun 16, 2017 MedGen:C2930900;MedGen:C1858593,OMIM:604286,Orphanet:ORPHA119;MedGen:CN517202 Beta-sarcoglycanopathy;Limb-girdle muscular dystrophy, type 2E;not provided germline;unknown 4 52029766 AAAGTGGCCTGCTTCGATTTAAGCAAGTATCTGACATGGGAGTGATCCACCCTCTTTATAA 730882155 181287 NM_024678.5(NARS2):c.641C>T (p.Pro214Leu) NARS2 Jan 01, 2015 MedGen:C4015643,OMIM:616239,Orphanet:ORPHA444458 Combined oxidative phosphorylation deficiency 24 germline 11 78528890 AGGTACCTGAGGAGAATTTCTTCAATGTTCCTGCTTTCTTAACTGTCTCAGGACAACTTCA 121907910 18544 NM_024426.4(WT1):c.1300C>T (p.Arg434Cys) WT1 Oct 01, 2007 MedGen:C1837026,OMIM:608978,Orphanet:ORPHA3097 Meacham syndrome germline 11 32392705 GACTTCAAGGACTGTGAACGAAGGTTTTCTCGTTCAGACCAGCTCAAAAGACACCAAAGGA 587777622 153716 NM_001759.3(CCND2):c.842C>T (p.Pro281Leu) CCND2 Aug 08, 2016 MedGen:C4014742,OMIM:615938 Megalencephaly-polymicrogyria-polydactyly-hydrocephalus syndrome 3 germline 12 4299981 CGGAGGATGAACTGGACCAAGCCAGCACCCCTACAGACGTGCGGGATATCGACCTGTGAGG 1114167756 419458 NM_000179.2(MSH6):c.1243C>T (p.Gln415Ter) MSH6 Mar 31, 2015 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 2 47799226 TCTTGTACTCCTGGGATGAGGAAGTGGTGGCAGATTAAGTCTCAGAACTTTGATCTTGTCA 786203485 182509 NM_005732.3(RAD50):c.412C>T (p.Arg138Ter) RAD50 Mar 27, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 5 132579363 AGTCTGAGCTCTAAGTGTGCAGAAATTGACCGAGAAATGATCAGTTCTCTTGGGGTTTCCA 745663149 213815 NM_018972.2(GDAP1):c.373C>T (p.Arg125Ter) GDAP1 May 27, 2014 MedGen:C1859198,OMIM:214400,Orphanet:ORPHA99948 Charcot-Marie-Tooth disease, type 4A germline 8 74360199 AGCATGTATTACCCACGGGTACAACATTACCGAGAGCTGCTTGACTCCTTGCCAATGGATG 876660444 235619 NM_001042492.2(NF1):c.2887C>T (p.Gln963Ter) NF1 Aug 18, 2015 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 17 31229871 TTGACTGATACCAATACTCAATTTGTAGAACAAACCATAGCTATAATGAAGAACTTGCTAG 28933391 28228 NM_000925.3(PDHB):c.1030C>T (p.Pro344Ser) PDHB Jul 01, 2004 MedGen:C3279841,OMIM:614111,Orphanet:ORPHA255138 Pyruvate dehydrogenase E1-beta deficiency germline 3 58428084 TATGCAAAGATTCTAGAGGACAACTCTATACCTCAGGTCAAAGACATCATATTTGCAATAA 398124050 100672 NM_004006.2(DMD):c.7657C>T (p.Arg2553Ter) DMD Jun 02, 2015 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009;MedGen:C3668940,OMIM:302045;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Becker muscular dystrophy;Dilated cardiomyopathy 3B;Duchenne muscular dystrophy germline X 31729634 AATCAAGAGGCTAGAACAATCATTACGGATCGAAGTAAGTTTTTTAACAAGCATGGGACAC 104886164 35837 NM_000495.4(COL4A5):c.2215C>T (p.Pro739Ser) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108603032 ACACCTGGAAGAATTGGTCTAGAAGGCCCTCCTGGGCCACCCGGCTTTCCAGGACCAAAGG 80356898 45982 NM_007294.3(BRCA1):c.1687C>T (p.Gln563Ter) BRCA1 Aug 14, 2017 Human Phenotype Ontology:HP:0003002,MedGen:C0678222;MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;Gene:6765,Human Phenotype Ontology:HP:0100615,MedGen:C0919267,OMIM:167000,SNOMED CT:123843001;MedGen:C1140680,Orphanet:ORPHA213500;MedGen:CN517202 Breast carcinoma;Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;Neoplasm of ovary;Ovarian cancer;not provided germline;unknown 17 43093844 CATGAGAATAAAACAAAAGGTGATTCTATTCAGAATGAGAAAAATCCTAACCCAATAGAAT 121908298 19344 NM_001005741.2(GBA):c.983C>T (p.Pro328Leu) GBA Jan 01, 1992 MedGen:C1961835,OMIM:230800,SNOMED CT:62201009 Gaucher's disease, type 1 germline 1 155237357 TCATGCTGGATGACCAACGCTTGCTGCTGCCCCACTGGGCAAAGGTGGTAAGGCCTGGACC 312262767 49748 NM_025137.3(SPG11):c.5470C>T (p.Arg1824Ter) SPG11 Jan 31, 2013 MedGen:C1858479,OMIM:604360,Orphanet:ORPHA2822 Spastic paraplegia 11, autosomal recessive not provided 15 44584210 AATCAGGAGGAAACAGAGCCCAGATTTTCTCGACAGATCTCAACTAGTGGTGAACTTTCCT 121434611 26607 NM_002578.4(PAK3):c.1255C>T (p.Arg419Ter) PAK3 Sep 01, 1998 MedGen:C0796237,OMIM:300558 Mental retardation 30, X-linked germline X 111196488 TGTGCCCAGATCACTCCTGAGCAAAGTAAACGAAGCACTATGGTGGGAACCCCATATTGGA 186547381 45745 NM_004960.3(FUS):c.1292C>T (p.Pro431Leu) FUS Aug 10, 2012 MedGen:C3539195,OMIM:614782 Tremor, hereditary essential, 4 germline 16 31190398 AGCGAGCTGGTGACTGGAAGTGTCCTAATCCGTGAGTGAAACTTAATTTTTTTCTTAGTTC 886037857 247579 NM_018480.5(TMEM126B):c.208C>T (p.Gln70Ter) TMEM126B Aug 01, 2016 MedGen:C1838979,OMIM:252010 Mitochondrial complex I deficiency germline 11 85634090 ACTGAATTTTTCTTTTTTTCTATTAGGACACAAAATATATATCAAATGGCGACATTTGGAA 63750424 29286 NM_005910.5(MAPT):c.1216C>T (p.Arg406Trp) MAPT Nov 26, 2014 Human Phenotype Ontology:HP:0002145,MedGen:C0338451,OMIM:600274,Orphanet:ORPHA282,SNOMED CT:230270009;MedGen:CN517202 Frontotemporal dementia;not provided germline 17 46024061 TCGCCAGTGGTGTCTGGGGACACGTCTCCACGGCATCTCAGCAATGTCTCCTCCACCGGCA 180177172 200436 NM_000030.2(AGXT):c.130C>T (p.Gln44Ter) AGXT Nov 27, 2014 MedGen:C0268164,OMIM:259900,Orphanet:ORPHA93598,SNOMED CT:65520001 Primary hyperoxaluria, type I germline 2 240868995 CCTCCTCGCATCATGGCAGCCGGGGGGCTGCAGATGATCGGGTCCATGAGCAAGGATATGT 768671894 186898 NM_000053.3(ATP7B):c.2519C>T (p.Pro840Leu) ATP7B Sep 22, 2016 MedGen:C0019202,OMIM:277900,Orphanet:ORPHA905,SNOMED CT:88518009;MedGen:CN517202 Wilson disease;not provided germline;unknown 13 51950328 TCGTCAAGGTGGTCCCTGGGGGAAAGTTTCCAGTGGATGGGAAAGTCCTGGAAGGCAATAC 797044546 181178 NM_001242896.1(DEPDC5):c.4567C>T (p.Gln1523Ter) DEPDC5 Apr 13, 2016 Gene:50987,MedGen:C1858477,OMIM:604364 Epilepsy, familial focal, with variable foci 1 germline 22 31906252 CTGCCCTACTCCAAGCGCAAGTTCTCAGGGCAGCAGCGGCGGCGGCGGAACTCCACCAGCT 121918597 27993 NM_001035.2(RYR2):c.6737C>T (p.Ser2246Leu) RYR2 Jan 10, 2017 MedGen:C1631597,Orphanet:ORPHA3286;MedGen:C4053736,OMIM:604772;MedGen:CN517202 Catecholaminergic polymorphic ventricular tachycardia;Catecholaminergic polymorphic ventricular tachycardia type 1;not provided germline 1 237634937 GTTCAACACCACTGGATGTGGCTGCAGCTTCGGTGATGGATAATAATGAACTAGCATTAGC 121908526 20686 NM_000030.2(AGXT):c.697C>T (p.Arg233Cys) AGXT Nov 27, 2014 MedGen:C0268164,OMIM:259900,Orphanet:ORPHA93598,SNOMED CT:65520001 Primary hyperoxaluria, type I germline 2 240875125 TTCTTTCTCCCCAGAAAGAAGATGTACTCCCGCAAGACGAAGCCCTTCTCCTTCTACCTGG 121913610 29193 NM_005373.2(MPL):c.556C>T (p.Gln186Ter) MPL Mar 16, 1999 MedGen:C1327915,OMIM:604498,Orphanet:ORPHA3319 Congenital amegakaryocytic thrombocytopenia germline 1 43339435 CCCAAGAACTCCACTGGTCCCACGGTCATACAGCTGATTGCCACAGAAACCTGCTGCCCTG 398122363 94421 NM_052813.4(CARD9):c.865C>T (p.Gln289Ter) CARD9 Nov 20, 2013 MedGen:C1859353,OMIM:212050,Orphanet:ORPHA457088 Candidiasis, familial, 2 germline 9 136370380 TACATCCAGGTACTGGAGGAGGACTGGCGGCAGGCGCTGCGGGACCACCAGGAGCAGGCCA -1 450375 NM_024989.3(PGAP1):c.427C>T (p.Gln143Ter) PGAP1 Sep 11, 2016 MedGen:C4014343,OMIM:615802 Mental retardation, autosomal recessive 42 germline 2 196916468 GTGGCTTTGTATGGTGGAAGTCTTCAGAAGCAGACCAAGTTTGTACATGAATGTATTAAAA -1 429810 NM_004380.2(CREBBP):c.1237C>T (p.Arg413Ter) CREBBP Jan 19, 2017 MedGen:C0035934,OMIM:180849,Orphanet:ORPHA353277,SNOMED CT:45582004;MedGen:CN517202 Rubinstein-Taybi syndrome;not provided germline 16 3792074 CTGGTCATAGTTGCCCATTGTGCATCTTCACGACAAATCATCTCTCATTGGAAGAACTGCA -1 439843 NM_001136191.2(KANK2):c.2027C>T (p.Ser676Phe) KANK2 Nov 27, 2017 MedGen:CN651336,OMIM:617783 NEPHROTIC SYNDROME 16 germline 19 11174514 ACGGCAACACAGCCCTGCACTACTCCGTGTCTCATGCCAACTTCCCCGTGGTGCAGCAGCT -1 427112 NM_003052.4(SLC34A1):c.934C>T (p.Gln312Ter) SLC34A1 Aug 11, 2017 MedGen:C2676786,OMIM:612286 Nephrolithiasis/osteoporosis, hypophosphatemic, 1 unknown 5 177388370 ATCCAGATCTGGTGCCACCCAGACTCCTTACAGGTGAGTCCCAGGCCTAACCCCAGGTAAG 886041578 264910 NM_001083962.1(TCF4):c.1471C>T (p.Gln491Ter) TCF4 Feb 18, 2016 MedGen:CN517202 not provided germline 18 55234563 TCTGCGACTTCCCCTGACCTGAACCCACCCCAGGACCCTTACAGAGGTAGGTTGGCCTCAC 28940887 18707 NM_000229.1(LCAT):c.475C>T (p.Arg159Trp) LCAT Feb 01, 1993 MedGen:C0023195,OMIM:245900,Orphanet:ORPHA650 Norum disease germline 16 67942719 GTGCAGAACCTGGTCAACAATGGCTACGTGCGGGACGAGACTGTGCGCGCCGCCCCCTATG 768047421 404643 NM_002111.8(HTT):c.2114C>T (p.Pro705Leu) HTT Apr 15, 2017 MedGen:CN643601,OMIM:617435 Lopes-Maciel-Rodan syndrome germline 4 3131647 GCTTGGGTGATTTCTTGGCAGTGCTGGTTCCGGACAGGGATGTGAGGGTCAGCGTGAAGGC 72552780 28735 NM_018849.2(ABCB4):c.430C>T (p.Arg144Ter) ABCB4 Oct 01, 2009 MedGen:C3554241,OMIM:614972 Cholestasis, intrahepatic, of pregnancy 3 germline 7 87453050 CAAGTTTCATTTTGGACTTTGGCAGCTGGTCGACAGATCAGGAAAATTAGGCAGAAGTTTT -1 431967 NM_005664.3(MKRN3):c.982C>T (p.Arg328Cys) MKRN3 Sep 07, 2017 MedGen:C3809199,OMIM:615346 Precocious puberty, central, 2 germline 15 23566764 GTCTATGAGAAGGCCAACCCCAATGACCGCCGCTTTGGCATTCTTTCCAATTGCAACCATT 758236584 187056 NM_000071.2(CBS):c.770C>T (p.Thr257Met) CBS May 07, 2017 MedGen:C3150344,OMIM:236200;MedGen:CN517202 Homocystinuria due to CBS deficiency;not provided germline;unknown 21 43063958 AGCTGGACATGCTGGTGGCTTCAGTGGGCACGGGCGGCACCATCACGGGCATTGCCAGGAA 121908979 21973 NM_001164277.1(SLC37A4):c.1243C>T (p.Arg415Ter) SLC37A4 Sep 01, 1999 MedGen:C0268146,OMIM:232220,SNOMED CT:30102006 Glucose-6-phosphate transport defect germline 11 119024957 GCGGCCAGCACGGCTGCCTTCTTCCTCCTACGAAACATCCGCACCAAGATGGGCCGAGTGT 80357369 69550 NM_007294.3(BRCA1):c.3430C>T (p.Gln1144Ter) BRCA1 Sep 08, 2016 MedGen:C2676676,OMIM:604370 Breast-ovarian cancer, familial 1 germline 17 43092101 GAACAGCCTATGGGAAGTAGTCATGCATCTCAGGTTTGTTCTGAGACACCTGATGACCTGT -1 448082 NM_006516.2(SLC2A1):c.835C>T (p.Gln279Ter) SLC2A1 Mar 26, 2017 MedGen:C3149117 GLUT1 deficiency syndrome 1, autosomal recessive germline 1 42929625 CGCCAGCCCATCCTCATCGCTGTGGTGCTGCAGCTGTCCCAGCAGCTGTCTGGCATCAACG 587777230 125798 NM_032898.4(CEP19):c.244C>T (p.Arg82Ter) CEP19 Dec 05, 2013 MedGen:C3810324,OMIM:615703,Orphanet:ORPHA397615 Morbid obesity and spermatogenic failure germline 3 196707811 AGGCAGCTAGAGAAGCTATTCAGTTTTTTACGAGGTTACTTGTCGGGGCAGAGTCTGGCAG 587777427 139375 NM_005640.2(TAF4B):c.1831C>T (p.Arg611Ter) TAF4B Apr 01, 2014 MedGen:C4014449,OMIM:615841 Spermatogenic failure 13 germline 18 26293530 AGAATAAAAGAGAATGTAACATCATGCTTCCGGTAAGAAAATAAATAGTTAAATTTGGTTT 759251812 263643 NM_144772.2(NAXE):c.196C>T (p.Gln66Ter) NAXE Nov 14, 2016 MedGen:C4310675,OMIM:617186 Encephalopathy, progressive, early-onset, with brain edema and/or leukoencephalopathy germline 1 156592114 CCGCGGGTTTTCCTCAGCCAGGAGGAGGCCCAGGCCGTGGACCAGGAGCTATTTAACGAAT 121913137 29721 NM_000208.3(INSR):c.2095C>T (p.Gln699Ter) INSR May 06, 1988 MedGen:C0265344,OMIM:246200,Orphanet:ORPHA508,SNOMED CT:111307005 Leprechaunism syndrome germline 19 7152862 TTCGAGTCTGAAGATTCTCAGAAGCACAACCAGAGTGAGTATGAGGATTCGGCCGGCGAAT 28934591 27133 NM_000196.3(HSD11B2):c.637C>T (p.Arg213Cys) HSD11B2 Dec 01, 1998 MedGen:C2936861,OMIM:218030 Apparent mineralocorticoid excess germline 16 67436115 CTCCTGCCCCTGCTGCGCAGCTCAAGGGGCCGCATCGTGACTGTGGGGAGCCCAGCGGGTG 377767383 36216 NM_005359.5(SMAD4):c.1600C>T (p.Gln534Ter) SMAD4 Dec 04, 2012 MedGen:C1832942,OMIM:175050 Juvenile polyposis/hereditary hemorrhagic telangiectasia syndrome not provided 18 51078408 TGGATTGAAATTCACTTACACCGGGCCCTCCAGCTCCTAGACGAAGTACTTCATACCATGC -1 444017 NM_017934.6(PHIP):c.4402C>T (p.Gln1468Ter) PHIP Jul 06, 2017 MedGen:CN517202 not provided germline 6 78946229 CCTGAAAGGAAAAAAAGGATCTTAAAACCCCAGCTAAAATCAGAAAGCTCTACCTCTGCAT 397514760 75609 NM_002295.5(RPSA):c.538C>T (p.Arg180Trp) RPSA May 24, 2013 MedGen:C1849084,OMIM:271400 Asplenia, isolated congenital germline 3 39411688 TCAGTGGGTTTGATGTGGTGGATGCTGGCTCGGGAAGTTCTGCGCATGCGTGGCACCATTT 137853146 20541 NM_014244.4(ADAMTS2):c.673C>T (p.Gln225Ter) ADAMTS2 Jul 10, 2017 MedGen:C2700425,OMIM:225410,Orphanet:ORPHA1901,SNOMED CT:55711009;MedGen:CN517202 Ehlers-Danlos syndrome, type vii, autosomal recessive;not provided germline;unknown 5 179272926 CCACCCACGTCCCCTCCTCTCGGGGGGCCACAGGCCCTGGACACAGGTGAGGCTACTGCAG 886039408 260290 NM_000425.4(L1CAM):c.1417C>T (p.Arg473Cys) L1CAM Mar 20, 2017 MedGen:CN517202 not provided germline X 153868690 GAGGATGGGACAACAGTGCTTCAGGACGAACGCTTCTTCCCCTATGCCAATGGGACCCTGG 1131691958 422061 NM_198525.2(KIF7):c.2509C>T (p.Gln837Ter) KIF7 May 30, 2017 MedGen:CN517202 not provided germline 15 89633769 AACGTGCAGCTCATGCGGCAGCAGCAGGGACAGCTGCAGAGGCGGCTTCGCGAGGAGACGG 762263694 425758 NM_000162.3(GCK):c.106C>T (p.Arg36Trp) GCK Jun 21, 2017 MedGen:C1841962,OMIM:125851;MedGen:CN517202 Maturity-onset diabetes of the young, type 2;not provided germline 7 44153403 CAGGAGGAGGACCTGAAGAAGGTGATGAGACGGATGCAGAAGGAGATGGACCGCGGCCTGA 387907258 45640 NM_001277115.1(DNAH11):c.7772C>T (p.Pro2591Leu) DNAH11 Feb 25, 2013 MedGen:C2678473,OMIM:611884 Ciliary dyskinesia, primary, 7 germline 7 21738827 CTGAAGTGGACTTATATGGCACCGTTCAGCCTCACACCCTGATCCGGCAGCATATTGATTA 61751374 22933 NM_000350.2(ABCA4):c.3113C>T (p.Ala1038Val) ABCA4 Oct 31, 2017 MedGen:C1858806,OMIM:604116;MedGen:C1858806,OMIM:604116;Human Phenotype Ontology:HP:0000556,MedGen:C0854723,Orphanet:ORPHA71862,SNOMED CT:314407005;MeSH:C535804,MedGen:C1855465,OMIM:248200;MeSH:C535804,MedGen:C1855465,OMIM:248200;MedGen:CN517202 Cone-rod dystrophy 3;Cone-rod dystrophy 3;Retinal dystrophy;Stargardt disease 1;Stargardt disease 1;not provided germline;unknown 1 94043413 CCCAGCTGAAAGGAAAGTCCCAGGAGGAGGCCCAGCTGGAGATGGAAGCCATGTTGGAGGA 121918156 15714 NM_000312.3(PROC):c.793C>T (p.Leu265Phe) PROC Nov 15, 1993 MedGen:C2676759,OMIM:612304 Thrombophilia, hereditary, due to protein C deficiency, autosomal recessive germline 2 127427219 ATGGATGAGTCCAAGAAGCTCCTTGTCAGGCTTGGTATGGGCTGGAGCCAGGCAGAAGGGG 1060503138 396356 NM_000535.6(PMS2):c.1891C>T (p.Gln631Ter) PMS2 Jun 12, 2016 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Lynch syndrome germline 7 5986874 TCTATGAGTTCTTTAGCTAAACGAATAAAGCAGTTACATCATGAAGCACAGCAAAGTGAAG 886041224 265149 NM_000444.5(PHEX):c.1645C>T (p.Arg549Ter) PHEX May 02, 2017 MedGen:CN517202 not provided germline X 22190502 GCCTTCTACAGTGCATCCACCAACCAGATCCGTGAGTACGGGTTCCTTGTCTCCTTGGTAA 397514506 48063 NM_004281.3(BAG3):c.652C>T (p.Arg218Trp) BAG3 Jun 24, 2013 MedGen:C0349788,Orphanet:ORPHA247,SNOMED CT:253528005,SNOMED CT:281170005;MedGen:C3151293,OMIM:613881 Arrhythmogenic right ventricular cardiomyopathy;Dilated cardiomyopathy 1HH germline;unknown 10 119672399 ATTCCGGTGATACACGAGCAGAACGTTACCCGGCCAGCAGCCCAGCCCTCCTTCCACCAAG 1060503770 398068 NM_003002.3(SDHD):c.325C>T (p.Gln109Ter) SDHD Nov 16, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1868633,OMIM:168000;Human Phenotype Ontology:HP:0002666,MedGen:C0031511,OMIM:171300 Hereditary cancer-predisposing syndrome;Paragangliomas 1;Pheochromocytoma germline 11 112094815 GATTTTTTCTTTTTCTTTAGGGGCCTTGGACAAGTTGTTACTGACTATGTTCATGGGGATG 587776527 132239 NM_024675.3(PALB2):c.3256C>T (p.Arg1086Ter) PALB2 Jul 31, 2017 MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C0027672,SNOMED CT:699346009;MedGen:C3150547,OMIM:613348;MedGen:CN517202 Familial cancer of breast;Hereditary cancer-predisposing syndrome;Pancreatic cancer 3;not provided germline 16 23607958 CATCCCTGTGCCAAAGAGAGTGAGTCGTTGCGAAGCCCTGTGTTTCAGCTCATTGTGATTA 139218324 485787 NM_000529.2(MC2R):c.433C>T (p.Arg145Cys) MC2R Feb 08, 2013 MedGen:C1955741 Glucocorticoid Deficiency germline 18 13885086 GCACTGCGGTACCACAGCATCGTGACCATGCGCCGCACTGTGGTGGTGCTTACGGTCATCT 397507859 66780 NM_000059.3(BRCA2):c.6469C>T (p.Gln2157Ter) BRCA2 Sep 08, 2016 MedGen:C2675520,OMIM:612555 Breast-ovarian cancer, familial 2 germline 13 32340824 CACTCTATTAAAGTTTCTCCATATCTCTCTCAATTTCAACAAGACAAACAACAGTTGGTAT 281865009 47668 NM_024312.4(GNPTAB):c.3091C>T (p.Arg1031Ter) GNPTAB May 10, 2012 MedGen:C2673377,OMIM:252500,Orphanet:ORPHA576 I cell disease not provided 12 101761171 CAATCTGGTGTCTTGTCTGACAGAGAAATCCGAACACTGGCTACCAGAATTCACGAACTGC 312262737 49709 NM_025137.3(SPG11):c.2146C>T (p.Gln716Ter) SPG11 Nov 01, 2016 MedGen:CN239433;MedGen:C1858479,OMIM:604360,Orphanet:ORPHA2822;MedGen:CN517202 Spastic Paraplegia, Recessive;Spastic paraplegia 11, autosomal recessive;not provided germline 15 44626429 ACTTTCTTCAGGATTGATAGTCATTCTGCTCAAAAACTTGAGGAGCTTATTGGCATAGGCC 397515624 79351 NM_000394.3(CRYAA):c.34C>T (p.Arg12Cys) CRYAA Jul 01, 2013 MedGen:CN071376 Cataract, autosomal dominant, multiple types, with microcornea germline 21 43169133 GACGTGACCATCCAGCACCCCTGGTTCAAGCGCACCCTGGGGCCCTTCTACCCCAGCCGGC 200659479 217215 NM_032504.1(UNC80):c.1078C>T (p.Arg360Ter) UNC80 Jan 07, 2016 Human Phenotype Ontology:HP:0001298,MedGen:C1963101;MedGen:C4225203,OMIM:616801 Encephalopathy;Hypotonia, infantile, with psychomotor retardation and characteristic facies 2 germline 2 209813719 TGGTCTCTGATGTACTATCTACAAAGGCTGCGACACATGTTGGAAGAGAAGCCAGAAAAGC 1060500278 401648 NM_000267.3(NF1):c.1726C>T (p.Gln576Ter) NF1 Dec 29, 2016 MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003;MedGen:CN517202 Neurofibromatosis, type 1;not provided germline 17 31223448 TAACAATGAACTTTATGTTACTGCAGCTCACAAATGCTTTTTTACATCTGCAAGAAATTAA 199422185 34473 NM_018136.4(ASPM):c.9190C>T (p.Arg3064Ter) ASPM Apr 14, 2017 MedGen:C1837501,OMIM:608716;MedGen:CN517202 Primary autosomal recessive microcephaly 5;not provided germline 1 197093156 TCTGCTGCTTTGATCATACAAAAATATATACGAGCCAGGGAGGCTGGAAAGCATGAAAGGA 199474711 51279 NM_152263.3(TPM3):c.11C>T (p.Ala4Val) TPM3 Apr 11, 2013 MedGen:C0546264,OMIM:255310,Orphanet:ORPHA2020,SNOMED CT:240084007;MedGen:CN517202 Congenital myopathy with fiber type disproportion;not provided germline 1 154192008 CCTACCAACAGCCACTGCTCATGATGGAGGCCATCAAGAAAAAGATGCAGATGCTGAAGTT 1057518951 360874 NM_020732.3(ARID1B):c.1612C>T (p.Gln538Ter) ARID1B Jan 25, 2014 Human Phenotype Ontology:HP:0001274,MedGen:C1837248;Human Phenotype Ontology:HP:0001263,MedGen:C4020875;Human Phenotype Ontology:HP:0000998,MedGen:C0020555,Orphanet:ORPHA79365,SNOMED CT:29966009;Human Phenotype Ontology:HP:0002164,MedGen:C1834405;Human Phenotype Ontology:HP:0001319,MedGen:C2267233 Agenesis of corpus callosum;Global developmental delay;Hypertrichosis;Nail dysplasia;Neonatal hypotonia unknown 6 156829296 TTGTATGGCATGGGCAGTAACCCTCATTCTCAGCCTCAGCAGAGCAGTCCGTACCCAGGAG 137854595 260317 NM_000397.3(CYBB):c.907C>T (p.His303Tyr) CYBB Mar 21, 2017 MedGen:CN517202 not provided germline X 37803886 GACATATGTTTTATTCTATAGGTGGTCACTCACCCTTTCAAAACCATCGAGCTACAGATGA 367543077 51105 NM_152490.4(B3GALNT2):c.1423C>T (p.Gln475Ter) B3GALNT2 Apr 19, 2013 MedGen:C3554638,OMIM:615181;MedGen:CN517202 Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type a, 11;not provided germline;unknown 1 235450286 ACCTGTGAGACAGGAATGCTGTCTTCTCCTCAGTATTCTCCGTGGGAACTGACGGAACTGT 796052925 201113 NM_000310.3(PPT1):c.424C>T (p.Gln142Ter) PPT1 Mar 29, 2016 MedGen:C1850451,OMIM:256730,Orphanet:ORPHA228329;MedGen:CN517202 Ceroid lipofuscinosis neuronal 1;not provided germline;unknown 1 40091338 CCCATGATCAATCTGATCTCGGTTGGGGGACAACATCAAGGTAACTTTGCCTCTTTGCTTT 146187042 44259 NM_000066.3(C8B):c.271C>T (p.Gln91Ter) C8B Sep 01, 2009 MedGen:C3151080,OMIM:613789 Complement component 8 deficiency type 2 germline 1 56956889 CTGCTACAGTACAGGTATGCCTACTTGCTCCAGCCCTCTCAGTTCCATGGGGAACCGTGCA 118203673 58096 NM_000368.4(TSC1):c.2293C>T (p.Gln765Ter) TSC1 Apr 24, 2017 MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000;MedGen:CN517202 Tuberous sclerosis syndrome;not provided germline 9 132902703 CAGAAAGAACAAGCTAGATACAATCAGCTCCAGGAGCAGCGTGACACTATGGTAACCAAGC 1085307455 415104 NM_000162.3(GCK):c.571C>T (p.Arg191Trp) GCK May 02, 2017 MedGen:CN517202 not provided germline 7 44149977 GTCGTGGGGCTTCTGCGAGACGCTATCAAACGGAGAGGGGTGAGGGGGCACCTGTACCTGC 28941784 18134 NM_052845.3(MMAB):c.556C>T (p.Arg186Trp) MMAB Feb 02, 2017 Human Phenotype Ontology:HP:0002912,MedGen:C0268583,SNOMED CT:42393006;MedGen:C1855102,OMIM:251110,Orphanet:ORPHA79311;MedGen:CN517202 Methylmalonic acidemia;Methylmalonic aciduria cblB type;not provided germline;unknown 12 109561068 GGCAAGATCAGCTCGGCGCTGCATTTCTGCCGGGCCGTGTGCCGCCGGGCCGAGAGACGGT 281865238 105624 NM_004183.3(BEST1):c.652C>T (p.Arg218Cys) BEST1 Apr 08, 2015 MedGen:C0339510,OMIM:153700,Orphanet:ORPHA1243,SNOMED CT:90036004;MedGen:CN517202 Vitelliform macular dystrophy type 2;not provided germline 11 61957402 TCTTCTGCCCCCCAGGAGATGAACACCTTGCGTACTCAGTGTGGACACCTGTATGCCTACG 1131691208 421100 NM_177438.2(DICER1):c.4654C>T (p.Gln1552Ter) DICER1 Aug 13, 2015 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 14 95096266 CAGTCCATTTCTTACGACTTGCACACTGAGCAGTGTATTGCTGACAAAAGCATAGCGGACT -1 447762 NM_006147.3(IRF6):c.1234C>T (p.Arg412Ter) IRF6 Mar 25, 2017 MedGen:C0175697,OMIM:119300,SNOMED CT:79261008 Van der Woude syndrome germline 1 209788590 ATCTACGAGATGTTTTCTGGTGATTTCACACGATCCTTTGATAGTGGCAGTGTCCGCCTGC 397509382 48188 NM_002609.3(PDGFRB):c.2959C>T (p.Arg987Trp) PDGFRB Jun 27, 2013 MedGen:C3554321,OMIM:615007 Basal ganglia calcification, idiopathic, 4 germline 5 150117796 TTTCTGAGGAGTGACCACCCAGCCATCCTTCGGTCCCAGGCCCGCTTGCCTGGGTTCCATG 121917828 16992 NM_145200.3(CABP4):c.370C>T (p.Arg124Cys) CABP4 Oct 01, 2006 MedGen:C1864877,OMIM:610427 Congenital stationary night blindness, type 2B germline 11 67456191 GGGACATCCTGGACTCTCCCCCTGCAGGACCGCGAACTGGGCCCCGAGGAGCTAGACGGTG 1064793916 406319 NM_000094.3(COL7A1):c.7828C>T (p.Arg2610Ter) COL7A1 Aug 18, 2015 MedGen:CN517202 not provided germline 3 48568137 TCCCCAGGAAAGGATGGAGTGCCTGGTATCCGAGGAGAAAAAGGAGATGTTGGCTTCATGG 386833752 70943 NM_001080522.2(CC2D2A):c.3341C>T (p.Thr1114Met) CC2D2A Feb 23, 2015 MedGen:C2676788,OMIM:612285;MedGen:C2676790,OMIM:612284 Joubert syndrome 9;Meckel syndrome type 6 unknown 4 15567729 AAGTCTCTTTTCAACGAACAGTTTGCCATACGACTACGGCTGAAGGACCAAACCCTAGCTG 141873759 424543 NM_000280.4(PAX6):c.130C>T (p.Arg44Ter) PAX6 - MedGen:C0344542,OMIM:106210 Aniridia 1 de novo 11 31802715 CACAGCGGGGCCCGGCCGTGCGACATTTCCCGAATTCTGCAGGTGATCCTCCCGGCGCCGC 121434281 18637 NM_000016.5(ACADM):c.734C>T (p.Ser245Leu) ACADM Nov 15, 2016 MedGen:C0220710,OMIM:201450,Orphanet:ORPHA42,SNOMED CT:128596003;MedGen:CN517202 Medium-chain acyl-coenzyme A dehydrogenase deficiency;not provided germline 1 75749444 ATTAGGAATTAAACATGGGCCAGCGATGTTCAGATACTAGAGGAATTGTCTTCGAAGATGT 587777567 150450 NM_005429.4(VEGFC):c.628C>T (p.Arg210Ter) VEGFC Jul 01, 2014 MedGen:C4014628,OMIM:615907 Lymphedema, hereditary, ID germline 4 176711575 ACAATCAGTTTTGCCAATCACACTTCCTGCCGATGCATGTCTAAACTGGATGTTTACAGAC 796065348 200763 NM_019074.3(DLL4):c.556C>T (p.Arg186Cys) DLL4 Aug 19, 2015 MedGen:C0265268,Orphanet:ORPHA974,SNOMED CT:34748004;MedGen:C4225271,OMIM:616589 Adams-Oliver syndrome;Adams-Oliver syndrome 6 germline;paternal 15 40931664 AGTGACAACTACTATGGAGACAACTGCTCCCGCCTGTGCAAGAAGCGCAATGACCACTTCG 104893818 27557 NM_003242.5(TGFBR2):c.1280C>T (p.Pro427Leu) TGFBR2 Aug 24, 2006 MedGen:C2674876,OMIM:610168 Loeys-Dietz syndrome 2 germline 3 30674130 TATAGGTGGGAACTGCAAGATACATGGCTCCAGAAGTCCTAGAATCCAGGATGAATTTGGA 63750763 426788 NM_001171.5(ABCC6):c.4377C>T (p.Arg1459=) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16150604 ACAGTGCACTGTGCTGCTCATTGCCCACCGCCTGCGCTCCGTGATGGACTGTGCCCGGTAA 587783517 168062 NM_152783.4(D2HGDH):c.566C>T (p.Pro189Leu) D2HGDH May 19, 2014 MedGen:C3152055,OMIM:600721 D-2-hydroxyglutaric aciduria 1 germline 2 241743697 GGTATGTGGAGGAACGGGACTTCATCATGCCGCTGGACTTAGGAGCCAAGGGCAGCTGCCA 104893620 24520 NM_001298.2(CNGA3):c.829C>T (p.Arg277Cys) CNGA3 Oct 01, 2001 MedGen:C1857618,OMIM:216900 Achromatopsia 2 germline 2 98395999 GGCACAAACTACCCAGAAGTGAGGTTCAACCGCCTACTGAAGTTTTCCCGGCTCTTTGAAT -1 417105 NM_019098.4(CNGB3):c.1426C>T (p.Gln476Ter) CNGB3 Mar 27, 2017 MedGen:C1849792,OMIM:262300 Achromatopsia 3 germline 8 86628973 ATGAACAATTACTCCATTCCTAAACTTGTGCAAAAGCGAGTTCGGACTTGGTATGAATATA 28942089 18534 NM_024426.4(WT1):c.1333C>T (p.His445Tyr) WT1 Apr 01, 1998 MedGen:C0268747,OMIM:256370,SNOMED CT:111406002,SNOMED CT:236383002;MedGen:C0950121,OMIM:194080,Orphanet:ORPHA220,SNOMED CT:236385009 Diffuse mesangial sclerosis;Drash syndrome germline 11 32392672 TCAGACCAGCTCAAAAGACACCAAAGGAGACATACAGGTTTGTAGGTTCACTTCTCATTGC 777437871 481449 NM_007171.3(POMT1):c.1987C>T (p.Leu663Phe) POMT1 Dec 13, 2017 MedGen:C3150415,OMIM:613155 Congenital muscular dystrophy-dystroglycanopathy with mental retardation, type B1 maternal 9 131522142 CCGTTCTTCCTGATGGAGAAGACACTCTTCCTCTACCACTACCTGCCCGCACTCACCTTCC 797044814 204271 NM_000084.4(CLCN5):c.2152C>T (p.Arg718Ter) CLCN5 Sep 25, 2014 MedGen:C1848336,OMIM:300009 Dent disease 1 germline X 50092130 TGTTTTTTTGTATTGTGTTTGTCTTTTAGGCGATTGCTTGGAATCATTACCAAAAAGGATG 147416429 214207 NM_023073.3(CPLANE1):c.7978C>T (p.Arg2660Ter) CPLANE1 Feb 23, 2015 MedGen:C3553264,OMIM:614615 Joubert syndrome 17 unknown 5 37153973 TAATATTTAGGTCTGCCAAAACCAGAGTTCCGATTCAAAGGACAGAGCACAAAGTCAGACT 375002796 260444 NM_005918.3(MDH2):c.398C>T (p.Pro133Leu) MDH2 Feb 08, 2017 MedGen:CN240510,OMIM:617339;Human Phenotype Ontology:HP:0007105,MedGen:C1856408;MedGen:CN238762;MedGen:CN238762 Epileptic encephalopathy, early infantile, 51;Infantile encephalopathy;Infantile encephalopathy;Infantile encephalopathy germline;inherited;not applicable 7 76058047 CCCTGACCGCTGCCTGTGCCCAGCACTGCCCGGAAGCCATGATCTGCGTCATTGCCAATCC 80358981 67021 NM_000059.3(BRCA2):c.7558C>T (p.Arg2520Ter) BRCA2 Oct 25, 2017 MedGen:C2676676,OMIM:604370;MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;Human Phenotype Ontology:HP:0100013,MeSH:D001943,MedGen:C1458155,Orphanet:ORPHA180250,SNOMED CT:126926005;MedGen:CN517202;MedGen:CN169374 Breast-ovarian cancer, familial 1;Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;Neoplasm of the breast;not provided;not specified germline;unknown 13 32356550 CTGTATCTTGCAAAAACATCCACTCTGCCTCGAATCTCTCTGAAAGCAGCAGTAGGAGGCC 121912510 29471 NM_000238.3(KCNH2):c.2453C>T (p.Ser818Leu) KCNH2 Sep 15, 2000 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MedGen:C3150943,OMIM:613688 Congenital long QT syndrome;Long QT syndrome 2 germline 7 150948995 CTCTGAACCTGTATGCAAGGCCTGGCAAGTCGAACGGGGATGTGCGGGCCCTCACCTACTG 397515389 39424 NM_005105.4(RBM8A):c.487C>T (p.Arg163Ter) RBM8A Dec 08, 2016 MedGen:C0175703,OMIM:274000,Orphanet:ORPHA3320,SNOMED CT:85589009 Radial aplasia-thrombocytopenia syndrome germline 1 145925920 TCTCCCTGCTTCTTTTTCCCTAGAGGTGGCCGAAGACGCAGCAGAAGTCCAGACCGGAGAC 781848162 264302 NM_018718.2(CEP41):c.418C>T (p.Gln140Ter) CEP41 Jul 11, 2016 MedGen:CN517202 not provided germline 7 130404568 GGAGCAGGGGACTCCAGCCGCTCAACTCTTCAGAGGTACTCGAAGCTGATTCATATTTTCA 104893941 23147 NM_003900.4(SQSTM1):c.1175C>T (p.Pro392Leu) SQSTM1 Apr 18, 2017 MedGen:C4225326,OMIM:616437;MedGen:C4225326,OMIM:616437;MedGen:C0029401,Orphanet:ORPHA280110,SNOMED CT:2089002;Gene:5131,MedGen:C4085252,OMIM:167250;Gene:5131,MedGen:C4085252,OMIM:167250;MedGen:CN517202 Frontotemporal dementia and/or amyotrophic lateral sclerosis 3;Frontotemporal dementia and/or amyotrophic lateral sclerosis 3;Paget disease of bone;Paget disease of bone, familial;Paget disease of bone, familial;not provided germline 5 179836445 GCTTCCTTACTGTTTCGGCAGAGGCTGACCCGCGGCTGATTGAGTCCCTCTCCCAGATGCT 775081992 260904 NM_198428.2(BBS9):c.223C>T (p.Arg75Ter) BBS9 - MedGen:C0752166,OMIM:209900,Orphanet:ORPHA110,SNOMED CT:5619004 Bardet-Biedl syndrome germline 7 33152811 GCCGAAGATTTGCTTCTAGAAGTGGATCTACGAGATCCAGTACTTCAAGTGGAAGTAGGAA 201947120 31839 NM_001361.4(DHODH):c.1036C>T (p.Arg346Trp) DHODH Jan 01, 2010 MedGen:C0265257,OMIM:263750,SNOMED CT:66038001 Miller syndrome germline 16 72023536 AGCAGCGGGCAGGACGCGCTGGAGAAGATCCGGGCAGGGGCCTCCCTGGTGCAGCTGTACA 727502788 165519 NM_001077494.3(NFKB2):c.2600C>T (p.Ala867Val) NFKB2 Dec 19, 2014 MedGen:C3809991,OMIM:615577,Orphanet:ORPHA293978 Common variable immunodeficiency 10 germline;tested-inconclusive 10 102402273 TACCCCCAGCAGAGGTGAAGGAAGACAGTGCGTACGGGAGCCAGTCAGTGGAGCAGGAGGC 1064793791 410329 NM_000271.4(NPC1):c.1298C>T (p.Pro433Leu) NPC1 Jun 22, 2015 MedGen:CN517202 not provided germline 18 23556271 ACCCTTCGGGAGCTGATGTACCCTTTGGACCTCCGCTTGACATACAGATACTGCACCAGGT 587783792 170060 NM_000252.2(MTM1):c.1420C>T (p.Arg474Ter) MTM1 Aug 10, 2017 MedGen:C0410203,OMIM:310400,Orphanet:ORPHA596,SNOMED CT:46804001;MedGen:CN517202 Severe X-linked myotubular myopathy;not provided germline X 150660437 ATTATAATTTTGGATCATCTGTATAGTTGCCGATTTGGTACTTTCTTATTCAACTGTGAAT 118204429 15511 NM_000035.3(ALDOB):c.178C>T (p.Arg60Ter) ALDOB Oct 07, 2015 Human Phenotype Ontology:HP:0005973,MedGen:C0016751,OMIM:229600,Orphanet:ORPHA469,SNOMED CT:20052008 Hereditary fructosuria germline;unknown 9 101429901 GAAAACACTGAAGAGAACCGCCGGCAGTTCCGAGAAATCCTCTTCTCTGTGGACAGTTCCA 876658575 235460 NM_004360.4(CDH1):c.2293C>T (p.Gln765Ter) CDH1 Oct 05, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 16 68828302 TATGATGAAGAAGGAGGCGGAGAAGAGGACCAGGTGGGTTTTGAAAACCTTGGTAGCTCAG 796051885 199890 NM_003239.4(TGFB3):c.898C>T (p.Arg300Trp) TGFB3 May 30, 2017 MedGen:C3553762,OMIM:614816;MedGen:C3810012,OMIM:615582;MedGen:CN517202 Loeys-Dietz syndrome 4;Loeys-Dietz syndrome 5;not provided de novo;germline 14 75963344 AACCCGGGCCAGGGGGGTCAGAGGAAGAAGCGGGCTTTGGACACCAATTACTGCTTCCGGT 397507173 46832 NM_000060.4(BTD):c.559C>T (p.Pro187Ser) BTD Dec 04, 2012 MedGen:C0220754,OMIM:253260,Orphanet:ORPHA79241,SNOMED CT:8808004 Biotinidase deficiency not provided 3 15644415 GAGCCTTGTCATAGCAGTGACCCAAGGTGCCCAAAAGATGGGAGATACCAGTTCAACACAA 121965058 15216 NM_000274.3(OAT):c.1276C>T (p.Arg426Ter) OAT Jul 01, 1992 Human Phenotype Ontology:HP:0012026,MedGen:C0599035,OMIM:258870,SNOMED CT:276426004 Ornithine aminotransferase deficiency germline 10 124397986 CCTCCGCTGGTGATCAAGGAGGATGAGCTTCGAGAGTCCATTGAAATTATTAACAAGACCA -1 439042 NM_001039590.2(USP9X):c.5395C>T (p.Arg1799Ter) USP9X Mar 31, 2017 MedGen:CN517202 not provided de novo X 41215962 TTACCTCCTGTTCTTGCTATACAACTAAAGCGATTTGACTATGACTGGGAAAGAGAATGTG 1131690804 420290 NM_004321.7(KIF1A):c.914C>T (p.Pro305Leu) KIF1A Sep 15, 2017 MedGen:C3280283,OMIM:614255;MedGen:CN517202 Mental retardation, autosomal dominant 9;not provided de novo;germline 2 240775895 ACAAGAAAAAGAAGAAGACAGATTTCATTCCGTACCGAGATTCCGTGTTGACCTGGCTCCT 767643821 197071 NM_004415.3(DSP):c.3805C>T (p.Arg1269Ter) DSP Aug 17, 2016 MedGen:CN517202 not provided germline 6 7579995 AGCATCTTGCAGGCCACTGAGCAGCGAAGGCGAGCTGAAGAAAACGCCCTTCAGCAAAAGG 121908378 20107 NM_014491.3(FOXP2):c.982C>T (p.Arg328Ter) FOXP2 Mar 02, 2016 MedGen:C0750927,OMIM:602081,Orphanet:ORPHA209908 Speech-language disorder 1 germline 7 114642616 AATGGACAGTCTTCAGTTCTAAGTGCAAGACGAGACAGGTAAATCTCATGAGCTTTATTCT -1 471825 NM_007194.3(CHEK2):c.1297C>T (p.Gln433Ter) CHEK2 May 02, 2017 MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006 Familial cancer of breast germline 22 28695205 GGGTATCCACCTTTCTCTGAGCATAGGACTCAAGTGTCACTGAAGGATCAGATCACCAGTG 762773076 433109 NM_000020.2(ACVRL1):c.698C>T (p.Ser233Leu) ACVRL1 Nov 23, 2016 MedGen:CN169374 not specified germline 12 51914511 GTGAGAGTGTGGCCGTCAAGATCTTCTCCTCGAGGGATGAACAGTCCTGGTTCCGGGAGAC 886037772 227166 NM_017909.3(RMND1):c.565C>T (p.Gln189Ter) RMND1 Dec 22, 2015 MedGen:C0751651,Orphanet:ORPHA68380 Mitochondrial diseases germline 6 151436494 GCAGATGAGTATCATCTGGGAAATCTGTCTCAAGATCTGGCCTCCCACGGATATGTTGAAG 587780035 232413 NM_000465.3(BARD1):c.709C>T (p.Gln237Ter) BARD1 Jul 11, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline 2 214781165 GGTGAATTTGACTCCAAAGAGGAATCTAAGCAAAAGCTGGTATCCTTCTGTAGCCAACCAT 199473097 78529 NM_198056.2(SCN5A):c.1099C>T (p.Arg367Cys) SCN5A Jun 14, 2017 MedGen:C1142166,Orphanet:ORPHA130,SNOMED CT:418818005;MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MedGen:CN517202 Brugada syndrome;Congenital long QT syndrome;not provided germline 3 38606710 TCCTTTGCCTGGGCCTTTCTTGCACTCTTCCGCCTGATGACGCAGGACTGCTGGGAGCGCC 886041122 264388 NM_000019.3(ACAT1):c.890C>T (p.Thr297Met) ACAT1 Sep 30, 2016 MedGen:CN517202 not provided germline 11 108142500 ATGATGGAGCAGCTGCTCTGGTTCTCATGACGGCAGATGCAGCGAAGAGGCTCAATGTTAC 61753178 18832 NM_000372.4(TYR):c.61C>T (p.Pro21Ser) TYR Jul 15, 1992 MedGen:C0268494,OMIM:203100,Orphanet:ORPHA79431,SNOMED CT:6483008;MedGen:CN517202 Tyrosinase-negative oculocutaneous albinism;not provided germline 11 89178014 TGGAGTTTCCAGACCTCCGCTGGCCATTTCCCTAGAGCCTGTGTCTCCTCTAAGAACCTGA 1057517941 360244 NM_152594.2(SPRED1):c.46C>T (p.Arg16Ter) SPRED1 Sep 19, 2016 MedGen:CN517202 not provided germline 15 38299386 CTTTGCATCTATTTTAGTAATAGTTATGCACGAGTGCGAGCTGTGGTGATGACCCGAGATG 121912942 32204 NM_001849.3(COL6A2):c.2455C>T (p.Gln819Ter) COL6A2 Aug 05, 2015 na;MedGen:C1850671,OMIM:255600;MedGen:CN517202 BETHLEM MYOPATHY 1, AUTOSOMAL RECESSIVE;Myosclerosis, autosomal recessive;not provided germline 21 46126535 CCTCAGATCGTGTGCCCAGACCTTCCCTGCCAAACAGGTAATGCAGGGCACCCTGAGCCAC 121909543 33120 NM_001145.4(ANG):c.407C>T (p.Pro136Leu) ANG Dec 01, 2007 MedGen:C2678468,OMIM:611895 Amyotrophic lateral sclerosis type 9 germline 14 20693971 ACGTTGTTGTTGCTTGTGAAAATGGCTTACCTGTCCACTTGGATCAGTCAATTTTCCGTCG 121912628 20911 NM_005732.3(RAD50):c.3277C>T (p.Arg1093Ter) RAD50 Sep 27, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C2751318,OMIM:613078,Orphanet:ORPHA240760 Hereditary cancer-predisposing syndrome;Nijmegen breakage syndrome-like disorder germline 5 132618182 GAAGAAATTATTCATTTTAAGAAAGAACTTCGAGAACCACAATTTCGGGATGCTGAGGAAA 375346212 434518 NM_016580.3(PCDH12):c.2515C>T (p.Arg839Ter) PCDH12 Oct 09, 2017 MedGen:C1855055,OMIM:251280 Microcephaly with spastic quadriplegia germline 5 141955337 CAAGGCAACCAGGGAGCACCGGCGGAGAGCCGAGAGGTGCTGCAAGACACGGTCAACCTCC 199422242 47552 NM_001363.4(DKC1):c.29C>T (p.Pro10Leu) DKC1 May 10, 2012 MedGen:C1148551,OMIM:305000 Dyskeratosis congenita X-linked not provided X 154764911 CTGTGTTTGTTTTTTTAGTAATTATTTTGCCAAAGAAACATAAGAAGAAAAAGGAGCGGAA -1 432079 NM_014112.4(TRPS1):c.1882C>T (p.Gln628Ter) TRPS1 Jan 24, 2017 MedGen:C0432233,OMIM:190350,SNOMED CT:254091006 Trichorhinophalangeal dysplasia type I germline 8 115604087 GGGGCGGCTGGAAGCTCGCGAGTCAAACATCAGTGCCATCAGTGTTCATTCACCACCCCTG 1057518134 360229 NM_000267.3(NF1):c.1591C>T (p.Gln531Ter) NF1 Sep 02, 2016 MedGen:CN517202 not provided germline 17 31219068 AGTACAGCAGAATTAATTACAGGGCTCGTCCAACTGGTCCCTCAGTCACACATGCCAGAGA -1 467433 NM_000346.3(SOX9):c.349C>T (p.Gln117Ter) SOX9 Nov 16, 2016 MedGen:C1861922,OMIM:114290,Orphanet:ORPHA140,SNOMED CT:74928006 Camptomelic dysplasia germline 17 72121740 CGGCCCATGAACGCCTTCATGGTGTGGGCGCAGGCGGCGCGCAGGAAGCTCGCGGACCAGT 119463990 18239 NM_001079802.1(FKTN):c.139C>T (p.Arg47Ter) FKTN Jul 23, 1998 MedGen:CN355827 Congenital muscular dystrophy-dystroglycanopathy with brain and eye anomalies, type A4 germline 9 105596631 GGAGCTGGTTTGTCAAAATCCAAAGGAAGCCGAATTGGATTTGATAGCACACAGTGGGTAT 121434561 31815 NM_000234.2(LIG1):c.2311C>T (p.Arg771Trp) LIG1 Apr 01, 2009 MedGen:C4016019 DNA ligase I deficiency germline 19 48121244 GTGATCGGCGCCTACCTGGGCCGGGGGAAGCGGGCCGGCCGGTACGGGGGCTTCCTGCTGG 397514681 50334 NM_000541.4(SAG):c.874C>T (p.Arg292Ter) SAG Jul 01, 2004 MedGen:C1306122,OMIM:258100,SNOMED CT:193687000 Oguchi's disease germline 2 233335029 CTGACGCTGCTGCCCTTGCTGGCTAACAATCGAGAAAGGAGAGGCATTGCCCTGGATGGGA 397515426 48436 NM_002768.4(CHMP1A):c.88C>T (p.Gln30Ter) CHMP1A May 23, 2017 MedGen:C3554209,OMIM:614961,Orphanet:ORPHA324569;MedGen:CN517202 Pontocerebellar hypoplasia type 8;not provided germline 16 89651586 AAGAAGGCGGAGAAGGACTCCAAGGCGGAGCAGGCCAAAGTGAAGAAGGTGAGACCCTGGG 121908452 20891 NM_022336.3(EDAR):c.1072C>T (p.Arg358Ter) EDAR Jun 20, 2017 MedGen:C1720965,OMIM:129490;MedGen:C0406702,OMIM:224900,Orphanet:ORPHA248,SNOMED CT:27025001;MedGen:C3551587;MedGen:CN517202 Autosomal dominant hypohidrotic ectodermal dysplasia;Autosomal recessive hypohidrotic ectodermal dysplasia syndrome;Ectodermal dysplasia 10a, hypohidrotic/hair/tooth type, autosomal dominant;not provided germline 2 108897182 CTGCCATTTGATTGCCTCGAGAAGACTAGCCGAATGCTCAGCTCCACGTACAACTCTGAGA 150321966 364135 NM_004092.3(ECHS1):c.518C>T (p.Ala173Val) ECHS1 Nov 16, 2017 MedGen:C4225391,OMIM:616277;MedGen:CN517202 Mitochondrial short-chain enoyl-coa hydratase 1 deficiency;not provided germline;inherited;maternal;paternal 10 133366990 CCAGCCATGACCAGCCCCTCCCTGCAGGTGCGGGCGGCACCCAGAGACTCACCCGTGCTGT 587777698 165610 NM_138425.3(C12orf57):c.184C>T (p.Gln62Ter) C12orf57 Dec 12, 2016 MedGen:C1857512,OMIM:218340,Orphanet:ORPHA1777;MedGen:CN517202 Temtamy syndrome;not provided germline 12 6944607 CAATTCGTGCTGCCCGTGGCCACGCAGATCCAGCAGGAGGTTATCAAAGCCTATGGCTTCA 749465098 243887 NM_016239.3(MYO15A):c.5809C>T (p.Arg1937Cys) MYO15A Jun 06, 2016 MedGen:C1838263,OMIM:600316 Deafness, autosomal recessive 3 germline 17 18142238 CACAAGATCATCCTGCTGCAAAGCCGGGCCCGTGGCTACCTTGCCAGGTGAGGCACAGAAA 61750137 105152 NM_000350.2(ABCA4):c.4234C>T (p.Gln1412Ter) ABCA4 Jan 01, 2016 MeSH:C535804,MedGen:C1855465,OMIM:248200;MedGen:CN517202 Stargardt disease 1;not provided germline 1 94031015 GCTTTGACCCTTCACCCCTGGATATATGGGCAGCAGTACACCTTCTTCAGGTGCGCGGACT 116840750 46872 NM_000168.5(GLI3):c.2146C>T (p.Gln716Ter) GLI3 Sep 13, 2012 MedGen:C0265220,OMIM:146510,Orphanet:ORPHA672,SNOMED CT:56677004 Pallister-Hall syndrome not provided 7 41967881 AGCCCTGGTGGTCAGTCTTCATGCAGCAGCCAACAGTCCCCCATCAGCAACTATTCCAACA 45539432 17454 NM_032409.2(PINK1):c.1366C>T (p.Gln456Ter) PINK1 Sep 16, 2008 MedGen:C1853833,OMIM:605909 Parkinson disease 6, autosomal recessive early-onset germline 1 20649109 ATCTTCGGGCTTGTCAATCCCTTCTACGGCCAGGGCAAGGCCCACCTTGAAAGCCGCAGCT 587782528 152248 NM_058216.2(RAD51C):c.97C>T (p.Gln33Ter) RAD51C Jun 23, 2017 MedGen:C3150659,OMIM:613399;MedGen:C3150653,OMIM:613390;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 3;Fanconi anemia, complementation group O;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline;unknown 17 58692740 GTGCGGGTGAAGCTGGTGTCTGCGGGGTTCCAGACTGCTGAGGAACTCCTAGAGGTGAAAC 121434435 21902 NM_001287.5(CLCN7):c.2299C>T (p.Arg767Trp) CLCN7 Jun 20, 2013 MedGen:C1833700,OMIM:166600;MedGen:C1969106,OMIM:611490 Osteopetrosis autosomal dominant type 2;Osteopetrosis autosomal recessive 4 germline 16 1447038 GTGTTCAAGCTGTTCCGGGCCCTGGGCCTGCGGCACCTGGTGGTGGTGGACAACCGCAATC 387907052 39875 NM_152722.4(HEPACAM):c.292C>T (p.Arg98Cys) HEPACAM Apr 08, 2011 MedGen:C3151355,OMIM:613925 Megalencephalic leukoencephalopathy with subcortical cysts 2a germline 11 124924863 ATCGGCACCCTGCGGCCTGACTATCGAGACCGTATCCGACTCTTTGAAAATGGCTCCCTGC 1057516034 353895 NM_015384.4(NIPBL):c.7150C>T (p.Gln2384Ter) NIPBL Nov 03, 2014 MedGen:CN029798,OMIM:122470 Cornelia de Lange syndrome 1 unknown 5 37052453 TGCCTAAAAGATCCTGTAAGGGGTTTCAGACAAGACGAGTCCTCTAGCGCTTTGTGTTCAC 886041178 265176 NM_000390.3(CHM):c.757C>T (p.Arg253Ter) CHM Apr 04, 2017 MedGen:CN517202 not provided germline X 85958923 ATTGATCTTCTAATCAAATCTAATGTTAGTCGATATGCAGAGTTTAAAAATATTACCAGGA 375801610 205070 NM_145020.4(CFAP53):c.121C>T (p.Arg41Ter) CFAP53 Mar 01, 2015 MedGen:C3553676,OMIM:614779 Heterotaxy, visceral, 6, autosomal germline 18 50262168 CAAGGAGCTGAGCACCATCTAGAAAGAATCCGACGCAGCCATCAGAAGCATAATGCTATTT 781215442 484437 NM_000051.3(ATM):c.7777C>T (p.Gln2593Ter) ATM Sep 29, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 11 108332026 ATAACTAAAAATGTGCCTAAACAAAGCTCTCAGCTTGATGAGGTATTTGGATTAAACATAC 281865491 47590 NM_004614.4(TK2):c.373C>T (p.Gln125Ter) TK2 Dec 06, 2012 MedGen:C3149750,OMIM:609560 Mitochondrial DNA depletion syndrome 2 not provided 16 66531382 CTCACCATGCTGGACAGGCATACTCGTCCTCAGGTAGGTTTCAGATGCTCAGTTTCAGCCT -1 440173 NM_001080463.1(DYNC2H1):c.7594C>T (p.Arg2532Trp) DYNC2H1 Jun 01, 2017 MedGen:C0265275,Orphanet:ORPHA474,SNOMED CT:75049004 Jeune thoracic dystrophy maternal 11 103192150 TATGTGTTAGAAATTGTAGCATATGAGGCACGGCGCTTATTTCGTGACAAAATTGTTGGTG 61752877 104756 NM_000329.2(RPE65):c.370C>T (p.Arg124Ter) RPE65 Apr 18, 2017 MedGen:C1859844,OMIM:204100;MedGen:C3151086,OMIM:613794;MedGen:CN517202 Leber congenital amaurosis 2;Retinitis pigmentosa 20;not provided germline 1 68444656 ATTTGTTTCTACAGGTTTTTTTCTTACTTTCGAGGAGTAGAGGTTACTGACAATGCCCTTG 199469465 39866 NM_006662.2(SRCAP):c.7303C>T (p.Arg2435Ter) SRCAP Jul 13, 2017 MedGen:C0729582,OMIM:136140,Orphanet:ORPHA2044,SNOMED CT:312214005;MedGen:CN517202 Floating-Harbor syndrome;not provided de novo;germline 16 30737343 ACACCACCCCGCTGCAGTCCTGCCAGGGAGCGAGTTCCCAGGCCAGCACCTAGGCCTCGAC 59026483 77805 NM_170707.3(LMNA):c.568C>T (p.Arg190Trp) LMNA May 16, 2017 MedGen:CN043576;MedGen:C1449563,OMIM:115200,Orphanet:ORPHA300751;MedGen:C1834481,OMIM:613426;MedGen:CN517202 Charcot-Marie-Tooth disease, type 2;Dilated cardiomyopathy 1A;Dilated cardiomyopathy 1S;not provided germline 1 156134457 AAGAAGCAACTTCAGGATGAGATGCTGCGGCGGGTGGATGCTGAGAACAGGCTGCAGACCA 1114167352 248723 NM_003688.3(CASK):c.1465C>T (p.Arg489Trp) CASK Aug 15, 2016 MedGen:CN238491 Smith-Magenis Syndrome-like de novo X 41578378 GACATGGATATGGAGAATGTGACCAGAGTTCGGCTGGTACAGTTTCAAAAGAACACAGATG -1 431071 NM_012160.4(FBXL4):c.1687C>T (p.Gln563Ter) FBXL4 Aug 10, 2017 MedGen:C3809592,OMIM:615471,Orphanet:ORPHA369897 Mitochondrial DNA depletion syndrome 13 (encephalomyopathic type) germline 6 98875430 GAATTGGCATGTAATTGTACCAGGTTACAGCAGCTGGACATATTAGGTAAGGTTACAATAT 587777042 76930 NM_001916.4(CYC1):c.643C>T (p.Leu215Phe) CYC1 Oct 26, 2017 MedGen:C3809553,OMIM:615453;MedGen:CN517202 Mitochondrial complex III deficiency, nuclear type 6;not provided germline 8 144096615 CATGGTGGTGAGGACTACGTCTTCTCCCTGCTCACGGGCTACTGCGAGCCACCCACCGGGG 748769566 273160 NM_004006.2(DMD):c.4483C>T (p.Gln1495Ter) DMD Jul 20, 2016 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Duchenne muscular dystrophy germline X 32389536 TTGCCTGCATTGGAAACAAAGAGTGTGGAACAGGAAGTAGTACAGTCACAGCTAAATCATT 121908886 21455 NM_003060.3(SLC22A5):c.844C>T (p.Arg282Ter) SLC22A5 Nov 16, 2017 MedGen:C0342788,OMIM:212140,Orphanet:ORPHA158,SNOMED CT:21764004;MedGen:CN517202 Renal carnitine transport defect;not provided germline 5 132387044 TGTACTGCCAGGTTCATCCCTGAGTCCCCCCGATGGCTCATCTCTCAGGGACGATTTGAAG 80357402 69482 NM_007294.3(BRCA1):c.3268C>T (p.Gln1090Ter) BRCA1 Sep 08, 2016 MedGen:C2676676,OMIM:604370 Breast-ovarian cancer, familial 1 germline 17 43092263 TTGAATGCTATGCTTAGATTAGGGGTTTTGCAACCTGAGGTCTATAAACAAAGTCTTCCTG 149474339 204994 NM_005213.3(CSTA):c.172C>T (p.Arg58Ter) CSTA Jun 01, 2015 MedGen:C1842797,OMIM:607936 Exfoliative ichthyosis, autosomal recessive, ichthyosis bullosa of siemens-like germline 3 122341442 GCTTTCTCTTTCTTTAATATTTTTCAGGTACGAGCAGGTGATAATAAATATATGCACTTGA 398124284 101539 NM_014795.3(ZEB2):c.805C>T (p.Gln269Ter) ZEB2 Apr 22, 2013 MedGen:C1856113,OMIM:235730,Orphanet:ORPHA2152 Mowat-Wilson syndrome germline 2 144403918 CATATGGTGACACACAAGCCAGGGACAGATCAGGTGGGGGGATGGTTTTAAGTGATTTCTT 72554310 103001 NM_000531.5(OTC):c.131C>T (p.Thr44Ile) OTC - MedGen:CN517202 not provided unknown X 38367344 AAGTGCAGCTGAAGGGCCGTGACCTTCTCACTCTAAAAAACTTTACCGGAGAAGAAATTAA 886040658 261362 NM_000059.3(BRCA2):c.6478C>T (p.Gln2160Ter) BRCA2 Jan 23, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 2;Hereditary cancer-predisposing syndrome germline 13 32340833 AAAGTTTCTCCATATCTCTCTCAATTTCAACAAGACAAACAACAGTTGGTATTAGGAACCA 587783626 168573 NM_004456.4(EZH2):c.2050C>T (p.Arg684Cys) EZH2 Feb 08, 2013 MedGen:C0265210,OMIM:277590,SNOMED CT:63119004 Weaver syndrome germline 7 148809370 TTCTTTTTAGATTTTGTGGTGGATGCAACCCGCAAGGGTAACAAAATTCGTTTTGCAAATC 397515528 76509 NM_000375.2(UROS):c.311C>T (p.Ala104Val) UROS Sep 12, 2013 MedGen:C0162530,OMIM:263700,Orphanet:ORPHA79277 Congenital erythropoietic porphyria not provided 10 125812222 AGTCAGTGTATGTGGTTGGAAATGCTACTGCTTCTCTAGGTAAGGAGTCAAGGTAAAAATA 41309764 27515 NM_017617.4(NOTCH1):c.3319C>T (p.Arg1107Ter) NOTCH1 Sep 08, 2005 MedGen:C1260873,OMIM:109730,SNOMED CT:8722008 Aortic valve disorder germline 9 136508238 CCCAGCGTGTCCTGTGAGGTGGCTGCGCAGCGACAAGGTAACCTGCTGTGCCCACCCAGCT 138877187 187828 NM_001165963.1(SCN1A):c.1624C>T (p.Arg542Ter) SCN1A Apr 08, 2016 MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002;MedGen:CN517202 Severe myoclonic epilepsy in infancy;not provided de novo;germline 2 166045081 AAAGGTTTTCGCTTCTCCATTGAAGGGAACCGATTGACATATGAAAAGAGGTACTCCTCCC 141581673 402988 NM_023036.4(DNAI2):c.1516C>T (p.Arg506Ter) DNAI2 Jun 09, 2016 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244 Ciliary dyskinesia germline 17 74312024 GGTGCCCAGATGTTTGAGCGTGAGACCCGGCGAGAGAAGATCCTGGAGGCCAGGCACCGGG 878854425 243875 NM_001008537.2(NEXMIF):c.937C>T (p.Arg313Ter) NEXMIF Jan 21, 2016 MedGen:CN517202 not provided germline X 74743620 CTAGGCAGTGATGTCTGCTCCCTGAAAATTCGATATGAATCCTTTCAGGACAATGTTCGAG 387906846 39250 NM_006015.4(ARID1A):c.4003C>T (p.Arg1335Ter) ARID1A Mar 18, 2012 MedGen:C3553247,OMIM:614607 Mental retardation, autosomal dominant 14 germline 1 26773716 CCCCCGCAGCAGCAGCAGCAGCAGCAGCAACGGTGAGTAAAGCCTGGTCTCGGTGCTGCTA 587784444 169201 NM_006662.2(SRCAP):c.7993C>T (p.Gln2665Ter) SRCAP Nov 15, 2013 MedGen:C0729582,OMIM:136140,Orphanet:ORPHA2044,SNOMED CT:312214005 Floating-Harbor syndrome germline 16 30738033 CCACCCTCAGCAGCATCTGATGAGCCACTTCAGGAGCCACTGGAGGCTGACAGGACCTCGG 797045132 205401 NM_005850.4(SF3B4):c.625C>T (p.Gln209Ter) SF3B4 Sep 07, 2012 Gene:171,MedGen:C0265245,OMIM:154400,SNOMED CT:35520007 Nager syndrome unknown 1 149926457 AACCCGCTCTCCCAGGCTGATCGCCCTCATCAGCTGTTTGCAGATGCACCTCCTCCACCCT 869025337 223742 NM_001199563.1(BVES):c.602C>T (p.Ser201Phe) BVES Aug 09, 2016 MedGen:C4225199,OMIM:616812,Orphanet:ORPHA476084 Muscular dystrophy, limb-girdle, type 2X germline 6 105124593 ATAACATTTACCCCTGTGCCTTTATAGATTCTCCTGAATTTAGATCAACTCAGATGCACAA 72653147 468422 NM_000088.3(COL1A1):c.2644C>T (p.Arg882Ter) COL1A1 Dec 22, 2017 MedGen:C0023931,OMIM:166200,SNOMED CT:385482004;MedGen:CN517202 Osteogenesis imperfecta type I;not provided germline 17 50189702 GGTGCTACTGGTTTCCCTGGTGCTGCTGGCCGAGTCGGTCCTCCTGGCCCCTCTGTAAGTC 118192211 203772 NM_172107.3(KCNQ2):c.881C>T (p.Ala294Val) KCNQ2 May 26, 2017 MedGen:C0393706,Orphanet:ORPHA1934;MedGen:C3150986,OMIM:613720,Orphanet:ORPHA439218;Human Phenotype Ontology:HP:0200134,MedGen:C0543888;MedGen:CN517202 Early infantile epileptic encephalopathy;Early infantile epileptic encephalopathy 7;Epileptic encephalopathy;not provided de novo;germline 20 63439644 ACCCCCAGACCTGGAACGGCAGGCTCCTTGCGGCAACCTTCACCCTCATCGGTGTCTCCTT 104894903 26468 NM_001129765.1(NSDHL):c.262C>T (p.Arg88Ter) NSDHL Jun 27, 2013 MedGen:C0265267,OMIM:308050,Orphanet:ORPHA139,SNOMED CT:17608003 Child syndrome germline X 152850418 GTGCGGTTCTTTCTGGGTGACCTCTGCAGCCGACAGGTAATGGACCATGCAGCCTTGCTGA 201391050 39717 NM_017651.4(AHI1):c.985C>T (p.Arg329Ter) AHI1 Mar 14, 2015 MedGen:C1837713,OMIM:608629;MedGen:CN517202 Joubert syndrome 3;not provided germline 6 135457660 GATGGTGATGGTGTTCATGAAATAACAAGCCGAGATAGCCCGGTTTATCCCAAATGTTTGC 137853220 31008 NM_000515.4(GH1):c.307C>T (p.Arg103Cys) GH1 Aug 01, 2007 MedGen:C1849779,OMIM:262650,Orphanet:ORPHA629 Kowarski syndrome germline 17 63917909 GTCCTTCCCCTGCAGAACCTAGAGCTGCTCCGCATCTCCCTGCTGCTCATCCAGTCGTGGC 1057516198 354186 NM_001110556.1(FLNA):c.4450C>T (p.Gln1484Ter) FLNA - MedGen:C1848213,OMIM:300049,OMIM:300537,SNOMED CT:448227009 Periventricular nodular heterotopia 1 germline X 154359008 GACACAAGCAAGGCTGGTGTGGCCCCATTGCAGGTCAAAGTGCAAGGGCCCAAAGGTGAGT 118203923 15660 NM_000277.2(PAH):c.731C>T (p.Pro244Leu) PAH Dec 01, 1992 MedGen:C0031485,OMIM:261600,Orphanet:ORPHA716,SNOMED CT:154735006;MedGen:CN517202 Phenylketonuria;not provided germline 12 102852926 TCCCAGCTTGCACTGGTTTCCGCCTCCGACCTGTGGCTGGCCTGCTTTCCTCTCGGGATTT 373899077 431548 NM_000339.2(SLC12A3):c.2581C>T (p.Arg861Cys) SLC12A3 - MedGen:C0268450,OMIM:263800,Orphanet:ORPHA358,SNOMED CT:3188003 Familial hypokalemia-hypomagnesemia unknown 16 56894563 CTCACCCTCCTCATTCCCTATCTCCTTGGCCGCAAGAGGAGGTGGAGCAAATGCAAGATCC 886041218 264205 NM_022455.4(NSD1):c.5581C>T (p.Arg1861Ter) NSD1 Nov 25, 2016 MedGen:C0004903,OMIM:130650,Orphanet:ORPHA116,SNOMED CT:81780002;MedGen:CN035106,OMIM:117550;MedGen:CN517202 Beckwith-Wiedemann syndrome;Sotos syndrome 1;not provided germline 5 177273743 CAAAAAGAGCTAAGACAGCTGCAGGAAGACCGAAAGAATGACAAGAAGCCACCACCTTATA 104893769 28057 NM_000539.3(RHO):c.50C>T (p.Thr17Met) RHO Sep 15, 1991 MedGen:C3151001,OMIM:613731 Retinitis pigmentosa 4 germline 3 129528783 CTAACTTCTACGTGCCCTTCTCCAATGCGACGGGTGTGGTACGCAGCCCCTTCGAGTACCC 7755898 27208 NM_000500.7(CYP21A2):c.955C>T (p.Gln319Ter) CYP21A2 Sep 03, 2015 MedGen:C0852654,OMIM:201910;MedGen:C0852654,OMIM:201910 21-hydroxylase deficiency;21-hydroxylase deficiency germline;unknown 6 32040421 CCGATCATTCCCCAGATTCAGCAGCGACTGCAGGAGGAGCTAGACCACGAACTGGGCCCTG 587780784 139767 NM_004360.4(CDH1):c.1003C>T (p.Arg335Ter) CDH1 Aug 11, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1708349,OMIM:137215,Orphanet:ORPHA26106;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Hereditary diffuse gastric cancer;not provided germline 16 68811854 GTCATCAGTGTGGTCACCACTGGGCTGGACCGAGAGGTCAGGGGTCAGGAGGATCCAGAGG 775269863 481476 NM_145207.2(SPATA5):c.700C>T (p.Gln234Ter) SPATA5 Sep 08, 2017 MedGen:C4225276,OMIM:616577,Orphanet:ORPHA457351 Epilepsy, hearing loss, and mental retardation syndrome maternal 4 122934291 ATGGAAACCAGTAGCCTGGAGTTATCCTTACAGCTAAGCCAGTTAGATCTGGAGGATACCC 128626250 26299 NM_004006.2(DMD):c.6292C>T (p.Arg2098Ter) DMD Sep 20, 2016 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Duchenne muscular dystrophy germline X 32217062 TTTCTTGATCCATATGCTTTTACCTGCAGGCGATTTGACAGATCTGTTGAGAAATGGCGGC 387906984 39669 NM_014918.4(CHSY1):c.205C>T (p.Gln69Ter) CHSY1 Dec 10, 2010 MedGen:C1854466,OMIM:605282,Orphanet:ORPHA363417 Temtamy preaxial brachydactyly syndrome germline 15 101251252 GGCGGGGCGCGCGGCGATGCGCGCGGGGCGCAGCTCTGGCCGCCCGGCTCGGACCCAGATG 80356711 34000 NM_000311.4(PRNP):c.478C>T (p.Gln160Ter) PRNP Apr 01, 2011 MedGen:CN181778;MedGen:C0162534,Orphanet:ORPHA56970 CEREBRAL AMYLOID ANGIOPATHY, PRNP-RELATED;Genetic prion diseases germline 20 4699698 TATCGTGAAAACATGCACCGTTACCCCAACCAAGTGTACTACAGGCCCATGGATGAGTACA 113994121 15732 NM_001145320.1(ADAMTSL2):c.440C>T (p.Pro147Leu) ADAMTSL2 Apr 19, 2012 MedGen:C3278147,OMIM:231050,SNOMED CT:28557005 Geleophysic dysplasia 1 germline 9 133540625 CAGATGACTATGTCCACATCTCCAGCAAACCGTGTGACCTGCACTGTACCACCGTGGACGG 397515430 48515 NM_001042544.1(LTBP4):c.1453C>T (p.Arg485Ter) LTBP4 Feb 15, 2013 MedGen:C2750804,OMIM:613177,Orphanet:ORPHA221145 Cutis laxa with severe pulmonary, gastrointestinal, and urinary abnormalities germline 19 40608315 AACACCAGACCCCTGGGCCAGGAGCCACCCCGAGTGTCACTCAGCCAGCCTCGTACCCTGC 794729279 199131 NM_001256850.1(TTN):c.58702C>T (p.Arg19568Ter) TTN Apr 03, 2014 MedGen:CN517202 not provided germline 2 178587684 AGAGGACGACCAGCCCCTAAAGTCACTTGGCGAAAAGTTGGCATTGATAATGTGGTCAGAA 121918174 15934 NM_000181.3(GUSB):c.646C>T (p.Arg216Trp) GUSB Jan 01, 1993 MedGen:C0085132,OMIM:253220,Orphanet:ORPHA584 Mucopolysaccharidosis type VII germline 7 65979477 TTTGACTTTTTCAACTACGCTGGACTGCAGCGGTCTGTACTTCTGTACACGACACCCACCA 312262762 49743 NM_025137.3(SPG11):c.4846C>T (p.Gln1616Ter) SPG11 Jan 31, 2013 MedGen:C1858479,OMIM:604360,Orphanet:ORPHA2822 Spastic paraplegia 11, autosomal recessive not provided 15 44589312 TTGAAGCTTATGCTACAGCAGTGTAAGACCCAGTATGAGCTGGGGAAGCTTTTACAGCTCT 1085307480 415221 NM_016628.4(WAC):c.1837C>T (p.Arg613Ter) WAC Apr 28, 2017 MedGen:CN517202 not provided germline 10 28617747 ACTGAATTAAAAAATTTAAGATCTTTAGTCCGAGTATGTGAAATTCAAGCAACTTTGCGAG 377584435 39566 NM_016123.3(IRAK4):c.34C>T (p.Arg12Cys) IRAK4 Jun 20, 2017 MedGen:C1843256,OMIM:607676,Orphanet:ORPHA70592;MedGen:CN517202 IRAK4 deficiency;not provided germline 12 43768145 AACAAACCCATAACACCATCAACATATGTGCGCTGCCTCAATGTTGGACTAATTAGGAAGC 387906801 39129 NM_000445.4(PLEC):c.6169C>T (p.Gln2057Ter) PLEC Jan 25, 2011 MedGen:C2931072,OMIM:226670,Orphanet:ORPHA257 Epidermolysa bullosa simplex and limb girdle muscular dystrophy germline 8 143923841 GAGGCGCGGCGCCTGCGGGAGCGAGCGGAGCAGGAGTCGGCGCGGCAGCTGCAGCTGGCCC 794728647 197558 NM_130799.2(MEN1):c.322C>T (p.Arg108Ter) MEN1 Apr 27, 2017 MedGen:C0027672,SNOMED CT:699346009;MeSH:D018761,MedGen:C0025267,OMIM:131100,Orphanet:ORPHA652,SNOMED CT:30664006;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Multiple endocrine neoplasia, type 1;not provided germline 11 64809788 CGAGGCGCCGTCGACCTGTCCCTCTATCCTCGAGAAGGGGGTGTCTCCAGCCGTGAGCTGG 773724817 221670 NM_000238.3(KCNH2):c.2587C>T (p.Arg863Ter) KCNH2 Oct 09, 2016 MeSH:D008133,MedGen:C0023976,SNOMED CT:9651007;MedGen:C3150943,OMIM:613688;MedGen:CN517202 Long QT syndrome;Long QT syndrome 2;not provided germline 7 150948861 TGGTCCAGCCTGGAGATCACCTTCAACCTGCGAGATGTGAGTTGGCTGCCCTGAGCTGGAC 879254789 245983 NM_000527.4(LDLR):c.1096C>T (p.Gln366Ter) LDLR Mar 25, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11111549 GATGAGTGTCAGGATCCCGACACCTGCAGCCAGCTCTGCGTGAACCTGGAGGGTGGCTACA 398123704 100046 NM_003482.3(KMT2D):c.11149C>T (p.Gln3717Ter) KMT2D Apr 11, 2013 MedGen:CN030661,OMIM:147920 Kabuki syndrome 1 germline 12 49033556 CGAAGCCTCGGACCTGATTCAAGGCTTTTACAGGAAAGGCAGCTGCAGCTGCAGCAGCAAC 201587138 176561 NM_144612.6(LOXHD1):c.4480C>T (p.Arg1494Ter) LOXHD1 Sep 12, 2016 MedGen:C2746083,OMIM:613079;MedGen:C2746083,OMIM:613079;MedGen:CN239439;MedGen:CN043648,Orphanet:ORPHA87884;MedGen:CN517202 Deafness, autosomal recessive 77;Deafness, autosomal recessive 77;Nonsyndromic Hearing Loss, Recessive;Nonsyndromic hearing loss and deafness;not provided germline 18 46529227 ATCTATGGAGACCTCGGGGACACTGGGGAGCGATACCTTGGCAAGTCAGAGAACCGGACCA 1085307870 415815 NM_001145408.1(NONO):c.1009C>T (p.Arg337Ter) NONO Mar 22, 2017 MedGen:CN517202 not provided germline X 71297442 GAAGAGCTGCACAACCAAGAGGTGCAAAAACGAAAGCAACTGGAGCTCAGGTAACTTTTCT 864309577 215284 NM_001904.3(CTNNB1):c.1867C>T (p.Gln623Ter) CTNNB1 Mar 06, 2015 MedGen:CN517202 not provided unknown 3 41236412 GTAGCTGCAGGGGTCCTCTGTGAACTTGCTCAGGACAAGGAAGCTGCAGAAGCTATTGAAG 869025592 224825 NM_001039590.2(USP9X):c.1111C>T (p.Arg371Ter) USP9X Mar 01, 2016 MedGen:C4225416,OMIM:300968 Mental retardation, X-linked 99, syndromic, female-restricted germline X 41141381 GTGATATCTAGTGTATCATACTATACTCATCGACATGGTAATCCTGAGGAGGAAGAGTGGC 199476408 40476 NM_032578.3(MYPN):c.1585C>T (p.Gln529Ter) MYPN May 01, 2012 MedGen:CN169883;MedGen:CN517202 Cardiomyopathy, familial restrictive, 4;not provided germline 10 68165803 AACAAATACGGCACAGTGTCAAGCATTGCACAGCTGCACGTGAGAGGTAAGGACTCTTTAA -1 439268 NM_020699.3(GATAD2B):c.655C>T (p.Gln219Ter) GATAD2B Apr 24, 2017 MedGen:CN517202 not provided de novo 1 153818114 ATTGTTCAGCCATCTCCTGCCCATGTGGGACAGCAGGGCCTATCTAAGCTTCCCTCTCGGC 80357038 69707 NM_007294.3(BRCA1):c.3895C>T (p.Gln1299Ter) BRCA1 Apr 20, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline;unknown 17 43091636 ACAAAATGTTCTGCTAGCTTGTTTTCTTCACAGTGCAGTGAATTGGAAGACTTGACTGCAA 878853144 237510 NM_001111125.2(IQSEC2):c.3097C>T (p.Gln1033Ter) IQSEC2 Jul 25, 2014 Human Phenotype Ontology:HP:0001249,MedGen:C1843367 Intellectual disability de novo X 53239213 CAGTCTTTCCCCCTCGTGGAAATGCACATGCAGCTCTTCCAGAATTCATGTGAGTCCCTTC 150576702 223763 NM_001012339.2(DNAJC21):c.517C>T (p.Arg173Ter) DNAJC21 Jul 28, 2016 MedGen:C4310744,OMIM:617052;MedGen:C2986691 Bone marrow failure syndrome 3;Inherited bone marrow failure syndrome germline;unknown 5 34937404 AATTTTGCATGGAAGGAAGAATATGATACACGACAGGCTTCAAACCGCTGGGAAAAACGAG 587783282 167744 NM_018136.4(ASPM):c.8704C>T (p.Gln2902Ter) ASPM Dec 11, 2013 MedGen:C1837501,OMIM:608716 Primary autosomal recessive microcephaly 5 germline 1 197100547 CACTACAGAGCATTTCTGTCTGCAAAACATCAAAGACAAGTCTATTTACAGATCAGAAGCA 190386869 36368 NM_000060.4(BTD):c.643C>T (p.Leu215Phe) BTD Jun 21, 2016 MedGen:C0220754,OMIM:253260,Orphanet:ORPHA79241,SNOMED CT:8808004 Biotinidase deficiency unknown 3 15644499 ACCCTTGTTGACCGCTACCGTAAACACAACCTCTACTTTGAGGCAGCATTCGATGTTCCTC 118192181 76894 NM_000540.2(RYR1):c.14581C>T (p.Arg4861Cys) RYR1 Nov 21, 2016 MedGen:C0751951,OMIM:117000,Orphanet:ORPHA597,SNOMED CT:43152001;MedGen:CN517202 Central core disease;not provided de novo;germline;unknown 19 38580439 CTGTACACCGTGGTGGCCTTCAACTTCTTCCGCAAGTTCTACAACAAGAGCGAGGATGAGG 137853271 25861 NM_000444.5(PHEX):c.1699C>T (p.Arg567Ter) PHEX Feb 03, 2016 MedGen:C0733682,OMIM:307800,Orphanet:ORPHA89936,SNOMED CT:82236004;MedGen:CN517202 Familial X-linked hypophosphatemic vitamin D refractory rickets;not provided germline;paternal;unknown X 22212957 AAGCCTTTCTTTTGGGGAACAGAATATCCTCGGTGAGTAAATGAGTACAGAAACCAGTTAC 727504293 175177 NM_000256.3(MYBPC3):c.1924C>T (p.Gln642Ter) MYBPC3 Feb 05, 2015 MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005 Primary familial hypertrophic cardiomyopathy germline 11 47341006 GCAGAGGTCAAGATTGACTTCGTACCCAGGCAGGGTAAGTCTTGGGGCCCCTGAGTCTTGG 387907092 40028 NM_017950.3(CCDC40):c.1951C>T (p.Gln651Ter) CCDC40 Jan 01, 2011 MedGen:C3151137,OMIM:613808 Ciliary dyskinesia, primary, 15 germline 17 80082020 ACCTCCAACAAGACCACCAAATACTTCAACCAGCTCATCCTGAGGCTGCAGAAGGAGAAGA 387907268 45727 NM_001077620.2(PRCD):c.64C>T (p.Arg22Ter) PRCD Aug 01, 2010 MedGen:C1864621,OMIM:610599 Retinitis pigmentosa 36 germline 17 76540205 GCCATGCTCTGGCGCCGCCGATTTGCCAACCGAGTCCAACCGTGAGAAACTGACCGGGCTA 121965036 15188 NM_000274.3(OAT):c.1186C>T (p.Arg396Ter) OAT Feb 15, 1992 Human Phenotype Ontology:HP:0012026,MedGen:C0599035,OMIM:258870,SNOMED CT:276426004 Ornithine aminotransferase deficiency germline 10 124398076 TTAGATTGGGATGCTTGGAAGGTGTGTCTACGACTTCGAGATAATGGACTTCTGGCCAAGC 121908721 17010 NM_000022.3(ADA):c.872C>T (p.Ser291Leu) ADA Jan 01, 1992 MedGen:C1863236,OMIM:102700,Orphanet:ORPHA277 Severe combined immunodeficiency due to ADA deficiency germline;unknown 20 44621121 GCAGGCTCAAAAATGACCAGGCTAACTACTCGCTCAACACAGATGACCCGCTCATCTTCAA 398123430 99070 NM_000512.4(GALNS):c.1175C>T (p.Ala392Val) GALNS Mar 28, 2013 MedGen:C0086651,OMIM:253000,Orphanet:ORPHA309297,SNOMED CT:7259005 Mucopolysaccharidosis, MPS-IV-A germline 16 88824834 TCTTCTATTACCGTGGCGACACGCTGATGGCGGCCACCCTCGGGCAGCACAAGGCTCACTT -1 425519 NM_000388.3(CASR):c.658C>T (p.Arg220Trp) CASR May 08, 2017 MedGen:C0342345,OMIM:601198;MedGen:C1809471,OMIM:145980,Orphanet:ORPHA93372,SNOMED CT:190868007;MedGen:CN517202 Hypocalcemia, autosomal dominant 1;Hypocalciuric hypercalcemia, familial, type 1;not provided germline 3 122261693 GGCACAATTGCAGCTGATGACGACTATGGGCGGCCGGGGATTGAGAAATTCCGAGAGGAAG 747682469 272088 NM_001004334.3(GPR179):c.673C>T (p.Gln225Ter) GPR179 May 19, 2016 MedGen:C3281215,OMIM:614565 Congenital stationary night blindness, type 1E germline 17 38343117 CCGCAGGCAGATGGATATGTGGGGGACACGCAGCAGGTGAGGCTGTCTCCTCCTTTCCTGG 121908285 16276 NM_152419.2(HGSNAT):c.1030C>T (p.Arg344Cys) HGSNAT Oct 01, 2011 MedGen:C0086649,OMIM:252930,Orphanet:ORPHA79271,SNOMED CT:75238000 Mucopolysaccharidosis, MPS-III-C germline 8 43182162 GTGTCTTTTGCAGTGTCTTGGGACAAGGTGCGCATTCCTGGTGTGCTGCAGCGATTGGGAG 121908953 21704 NM_001130978.1(DYSF):c.1813C>T (p.Gln605Ter) DYSF Aug 17, 2015 MedGen:C1850889,OMIM:253601,Orphanet:ORPHA268;MedGen:C1850808,OMIM:254130,Orphanet:ORPHA45448 Limb-girdle muscular dystrophy, type 2B;Miyoshi muscular dystrophy 1 germline 2 71553071 TTTGCGGCCTTCTACTCAGCCACCATGCTGCAGGATGTGGATGATGCCATCCAGTTTGAGG 886041719 264298 NM_001080508.2(TBX18):c.1285C>T (p.Arg429Ter) TBX18 May 05, 2016 MedGen:CN517202 not provided germline 6 84737224 GCCTGTGCCCGCTCAGGCCTCACCCTCAACCGATACAGCACATCTTTGGCAGAGACCTACA 879253931 244793 NM_000834.3(GRIN2B):c.2539C>T (p.Arg847Ter) GRIN2B Jun 02, 2017 MedGen:CN517202 not provided germline 12 13567084 ATCTGCGAACACCTTTTCTATTGGCAGTTCCGACATTGCTTTATGGGTGTCTGTTCTGGCA 876657389 188152 NM_004974.3(KCNA2):c.1214C>T (p.Pro405Leu) KCNA2 Jun 12, 2017 MedGen:C4225350,OMIM:616366;MedGen:CN517202 Epileptic encephalopathy, early infantile, 32;not provided germline 1 110603569 CGATTGCAGGTGTGTTAACTATTGCCTTACCGGTCCCTGTCATTGTGTCCAATTTCAACTA 28942088 18608 NM_016169.3(SUFU):c.44C>T (p.Pro15Leu) SUFU Jul 01, 2002 Human Phenotype Ontology:HP:0002885,MeSH:D008527,MedGen:C0025149,OMIM:155255,Orphanet:ORPHA616 Medulloblastoma somatic 10 102504196 GGCCTAGCGGCGCCCCCGGCCCCACCGCGCCCCCGGCCCCTGGCCCGACTGCCCCCCCGGC 387906963 39602 NM_024513.3(FYCO1):c.1045C>T (p.Gln349Ter) FYCO1 Jun 10, 2011 MedGen:C1864908,OMIM:610019 Cataract, autosomal recessive congenital 2 germline 3 45968289 CGGCTGGAGTCCATGCTGCAGCCCTTGGCACAGGAGCTTGAGGCCACACGGGACTCACTGG 121908014 18793 NM_000375.2(UROS):c.683C>T (p.Thr228Met) UROS Feb 01, 1992 MedGen:C0162530,OMIM:263700,Orphanet:ORPHA79277 Congenital erythropoietic porphyria germline 10 125788983 CTTTATAGTTTGCAGCCATCGGCCCCACTACGGCTCGCGCGCTGGCCGCCCAGGGCCTTCC 746930990 214744 NM_001324236.1(ITPA):c.195C>T (p.Ile65=) ITPA Oct 01, 2015 MedGen:C4225256,OMIM:616647,Orphanet:ORPHA457375 Epileptic encephalopathy, early infantile, 35 germline 20 3223409 CCTAAGGCGGAGAAGAACGCTGTCTCCCATCGCTTCCGGGCCCTGCTGGAGCTGCAGGAGT 137852493 25097 NM_000194.2(HPRT1):c.527C>T (p.Pro176Leu) HPRT1 Jul 01, 1989 MedGen:C0023374,OMIM:300322,SNOMED CT:10406007 Lesch-Nyhan syndrome germline X 134498431 AAAGGACCCCACGAAGTGTTGGATATAAGCCAGACTGTAAGTGAATTACTTTTTTTGTCAA 369152939 65658 NM_001349.3(DARS):c.821C>T (p.Ala274Val) DARS May 02, 2013 MedGen:C3809008,OMIM:615281,Orphanet:ORPHA363412 Hypomyelination with brainstem and spinal cord involvement and leg spasticity germline 2 135920591 TTTCTTTTATTAACTTCACAGTATTCAGAGCGGAAGACTCTAATACCCATAGACATCTAAC 397508702 68593 NM_000492.3(CFTR):c.4234C>T (p.Gln1412Ter) CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline 7 117665556 CACAGGATAGAAGCAATGCTGGAATGCCAACAATTTTTGGTGAGTCTTTATAACTTTACTT 727504417 176327 NM_001399.4(EDA):c.766C>T (p.Gln256Ter) EDA Sep 20, 2013 Human Phenotype Ontology:HP:0007607,MedGen:C1706004,Orphanet:ORPHA238468 Hypohidrotic ectodermal dysplasia germline X 70030493 TGCCAGCCAGCTGTGGTGCATCTACAGGGCCAAGGGTCAGCAATTCAAGTCAAGAATGGTA 199606180 52465 NM_000260.3(MYO7A):c.5660C>T (p.Pro1887Leu) MYO7A Aug 15, 2014 MedGen:C1568247,OMIM:276900,Orphanet:ORPHA231169 Usher syndrome, type 1 germline 11 77206120 TTTTCAGAAACGGGTCCCGGAAGTACCCTCCGCACCTGGTGGAGGTGGAGGCCATCCAGCA 267606824 16131 NM_017791.2(FLVCR2):c.977C>T (p.Ala326Val) FLVCR2 Aug 01, 2010 MedGen:C1856972,OMIM:225790,Orphanet:ORPHA221126 Proliferative vasculopathy and hydranencephaly-hydrocephaly syndrome germline 14 75633653 CTTCAGGTCTGAATGCTGGTGCTTTTTATGCCTTGTCCACTCTTCTGAATCGCATGGTGAT 794727631 194347 NM_001142800.1(EYS):c.490C>T (p.Arg164Ter) EYS Jan 01, 2015 Human Phenotype Ontology:HP:0000547,MeSH:D012174,MedGen:C0035334,OMIM:268000,Orphanet:ORPHA791,SNOMED CT:28835009;MedGen:C1864446,OMIM:602772 Retinitis pigmentosa;Retinitis pigmentosa 25 germline;unknown 6 65494921 AGTGGTCCATCACCTTGTCCACTGGGACTTCGACTAAATGTGACAGTGAAACAGCAGTTCT 387907302 45842 NM_133497.3(KCNV2):c.226C>T (p.Gln76Ter) KCNV2 Feb 01, 2008 MedGen:C1835897,OMIM:610356,Orphanet:ORPHA209932 Retinal cone dystrophy 3B germline 9 2717965 CAGTGGAAGGACGACCTGGCAGAAGAGGACCAGCAGGCAGGGGAGGTCACCACCGCCAAGC 72549401 21628 NM_003742.2(ABCB11):c.1723C>T (p.Arg575Ter) ABCB11 Nov 01, 1998 MedGen:C1866138,OMIM:601847 Progressive familial intrahepatic cholestasis 2 germline 2 168970131 CAAAGGGTAGCTATCGCCAGAGCCCTCATCCGAAATCCCAAGATTCTGCTTTTGGACATGG 387906966 39607 NM_024513.3(FYCO1):c.1546C>T (p.Gln516Ter) FYCO1 Jun 10, 2011 MedGen:C1864908,OMIM:610019 Cataract, autosomal recessive congenital 2 germline 3 45967788 CAGGAGGTCAGGTCTCTGACCCGGCAGCTGCAGTTCCTGGAGACCCAGCTGGCACAGGTGA 431825319 372717 NM_000059.3(BRCA2):c.4354C>T (p.Gln1452Ter) BRCA2 May 13, 2015 MedGen:CN517202 not provided germline 13 32338709 TCATTTAATAAAATTGTAAATTTCTTTGATCAGAAACCAGAAGAATTGCATAACTTTTCCT 762667660 410546 NM_173483.3(CYP4F22):c.976C>T (p.Arg326Ter) CYP4F22 Mar 15, 2017 MedGen:CN517202 not provided germline 19 15544007 GATGGAAAGGAACTGTCAGACGAGGATATCCGAGCCGAAGCAGACACCTTCATGTTTGAGG 121965088 15298 NM_004628.4(XPC):c.1735C>T (p.Arg579Ter) XPC Aug 01, 2001 MedGen:C2752147,OMIM:278720,SNOMED CT:25784009 Xeroderma pigmentosum, group C germline 3 14158148 GTGGTGGGCATTGACAGTGACGGCTGGGTCCGAGATGTCACACAGAGGTACGACCCAGTCT 869312905 226719 NM_002296.3(LBR):c.226C>T (p.Arg76Ter) LBR - MedGen:CN235880 Anadysplasia-like, spontaneously remitting spondylometaphyseal dysplasia germline 1 225422217 GGCTCAACTTCCAGTTCCCCTTCCAGACGCCGAGGGAGTCGATCAAGGTCACGCTCCCGAT 730881336 180391 NM_000051.3(ATM):c.742C>T (p.Arg248Ter) ATM May 31, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Ataxia-telangiectasia syndrome;Ataxia-telangiectasia syndrome;Familial cancer of breast;Hereditary cancer-predisposing syndrome;not provided germline;unknown 11 108244867 ATCTTCCTCAAGACTTTGGCTGTCAACTTTCGAATTCGAGTGTGTGAATTAGGAGATGAAA 63751228 182750 NM_000535.6(PMS2):c.1411C>T (p.Gln471Ter) PMS2 Nov 26, 2014 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 7 5987354 GCCATCTCTGACAAAGGCGTCCTGAGACCTCAGAAAGAGGCAGTGAGTTCCAGTCACGGAC 1131691073 420826 NM_001042492.2(NF1):c.6970C>T (p.Gln2324Ter) NF1 May 27, 2014 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 17 31340553 GCCCTCTTTTGGGTAGCTGTGGCTGTGCTGCAGCTTGATGAGGTCAACTTGTATTCAGCAG 758555274 373303 NM_003482.3(KMT2D):c.2317C>T (p.Gln773Ter) KMT2D Dec 15, 2016 MedGen:CN517202 not provided germline 12 49051366 CCGCAGGCTGAGGAGCCACACCTGTCCCCCCAGCCTGAGGAGCCATGCCTATGCGCTGTGC 74315324 17405 NM_213653.3(HJV):c.976C>T (p.Arg326Ter) HJV Jan 01, 2004 MedGen:C1865614,OMIM:602390 Hemochromatosis type 2A germline 1 146018382 CTCTGTGTTGGGGGGTGCCCTCCAAGTCAGCGACTCTCTCGATCAGAGCGCAATCGTCGGG 794727549 193853 NM_003482.3(KMT2D):c.7903C>T (p.Arg2635Ter) KMT2D Oct 01, 2014 MedGen:CN030661,OMIM:147920 Kabuki syndrome 1 germline 12 49039867 CTCCCCTACCTGTCCCATGGAGCCTCACAGCGATCAGGCATCACCTCTCCTGTCGAAAAGC 121908447 20484 NM_000553.4(WRN):c.3493C>T (p.Gln1165Ter) WRN Apr 12, 1996 MedGen:C0043119,OMIM:277700,Orphanet:ORPHA902,SNOMED CT:51626007 Werner syndrome germline 8 31147397 GTGTTATATGGCAAATTGGTAGAAGCTAGGCAGAAACATGCCAATAAAATGGATGTTCCCC 886041862 263945 NM_024408.3(NOTCH2):c.6787C>T (p.Gln2263Ter) NOTCH2 Jul 14, 2016 MedGen:CN517202 not provided germline 1 119915935 TGGATGAACCGCATGGAGGTGAATGAGACCCAGTACAATGAGATGTTTGGTATGGTCCTGG 113309941 17157 NM_003477.2(PDHX):c.742C>T (p.Gln248Ter) PDHX Feb 01, 2007 MedGen:C1855553,OMIM:245349,Orphanet:ORPHA255182 Pyruvate dehydrogenase E3-binding protein deficiency germline 11 34966740 ACAGCCACTCCCACAGCACCTTCGCCCCTACAGGCCACAGCTGGACCATCTTATCCCCGGC 80358221 27231 NM_001166120.1(HSD3B2):c.776C>T (p.Thr259Met) HSD3B2 Apr 01, 2000 MedGen:C0342471,OMIM:201810,SNOMED CT:54470008 3 beta-Hydroxysteroid dehydrogenase deficiency germline 1 119422277 GAGGTCAATTCTATTACATCTCAGATGACACGCCTCACCAAAGCTATGATAACCTTAATTA 104894750 25878 NM_000054.4(AVPR2):c.607C>T (p.Arg203Cys) AVPR2 Oct 01, 1992 MedGen:C1563705,OMIM:304800 Nephrogenic diabetes insipidus, X-linked germline X 153906113 TGGGCCTGCTTTGCGGAGCCCTGGGGCCGTCGCACCTATGTCACCTGGATTGCCCTGATGG 137853289 17901 NM_173076.2(ABCA12):c.6610C>T (p.Arg2204Ter) ABCA12 Nov 17, 2016 MedGen:C0239849,OMIM:242500;MedGen:CN517202 Autosomal recessive congenital ichthyosis 4B;not provided germline 2 214953891 GTTTCTCAGGGCACCATGTTTTTTTCCTTGCGACTCTTAATCAACGAATCCCTGATAAAGA -1 463612 NM_000059.3(BRCA2):c.9895C>T (p.Gln3299Ter) BRCA2 Apr 03, 2017 MedGen:C0677776,Orphanet:ORPHA145 Hereditary breast and ovarian cancer syndrome germline 13 32398408 TTTGTTTCTCCGGCTGCACAGAAGGCATTTCAGCCACCAAGGAGTTGTGGCACCAAATACG 397518483 94343 NM_000965.4(RARB):c.1159C>T (p.Arg387Cys) RARB Feb 27, 2017 MedGen:C3809803,OMIM:615524;MedGen:CN517202 Microphthalmia, syndromic 12;not provided germline 3 25596428 TTCCATTATCTCTTTTGAAAAGGTGCAGAGCGTGTAATTACCTTGAAAATGGAAATTCCTG -1 441006 NM_182961.3(SYNE1):c.4939C>T (p.Gln1647Ter) SYNE1 Nov 09, 2016 MedGen:CN517202 not provided germline 6 152428242 GAGGACATCCTAAGGAGGGCGAAGGAGAGACAGACGGCGCTGGAGAATCTGCTGGCCCACT 397514664 48771 NM_002335.3(LRP5):c.1145C>T (p.Pro382Leu) LRP5 Jan 01, 2010 MedGen:C0432252,OMIM:259770,Orphanet:ORPHA2788,SNOMED CT:254112001 Osteoporosis with pseudoglioma germline 11 68386445 TCCGGCACGCCATTGCCATCGACTACGACCCGCTAGAGGGCTATGTCTACTGGACAGATGA 730880441 179864 NM_000169.2(GLA):c.1085C>T (p.Pro362Leu) GLA Oct 19, 2011 MedGen:CN517202 not provided germline X 101398014 CTATGATAAACCGGCAGGAGATTGGTGGACCTCGCTCTTATACCATCGCAGTTGCTTCCCT 62638197 20883 NM_000843.3(GRM6):c.137C>T (p.Pro46Leu) GRM6 May 15, 2017 Human Phenotype Ontology:HP:0007642,MedGen:C0339535,Orphanet:ORPHA215,SNOMED CT:232061009;MedGen:C1850362,OMIM:257270;MedGen:CN517202 Congenital stationary night blindness;Congenital stationary night blindness, type 1B;not provided germline;unknown 5 178994808 CGGGCGGCCTGACGCTGGGCGGCCTGTTCCCGGTGCACGCGCGGGGCGCGGCGGGCCGGGC 587784382 170182 NM_006517.4(SLC16A2):c.916C>T (p.Gln306Ter) SLC16A2 Feb 08, 2013 MedGen:C0795889,OMIM:300523,Orphanet:ORPHA59 Allan-Herndon-Dudley syndrome germline X 74524699 GTCCGCACCCTGCACCAGCGCTTTCTGGCTCAGCTCAGGAAGTACTTCAACATGCGAGTGT 80338770 15894 NM_080669.5(SLC46A1):c.337C>T (p.Arg113Cys) SLC46A1 Dec 08, 2011 MedGen:C0342705,OMIM:229050,Orphanet:ORPHA90045,SNOMED CT:62578003;MedGen:CN517202 Congenital defect of folate absorption;not provided germline 17 28405360 CTGCTGGGAGCTTGGAGCGACAGTGTGGGCCGCCGCCCGCTGCTAGTGCTGGCCTCGCTGG 587783771 170042 NM_000252.2(MTM1):c.1261C>T (p.Arg421Ter) MTM1 Jul 10, 2015 MedGen:C0410203,OMIM:310400,Orphanet:ORPHA596,SNOMED CT:46804001 Severe X-linked myotubular myopathy germline X 150659664 AAAACAAATTATCTTCATCAATTTATTCAGCGAATAGGTCATGGTGATAAAAACCACACCG 80338796 28996 NM_002880.3(RAF1):c.770C>T (p.Ser257Leu) RAF1 Nov 15, 2017 Human Phenotype Ontology:HP:0030078,MeSH:C538231,MedGen:C0152013;MedGen:C0278701;MedGen:C4014656,OMIM:615916;MeSH:D015179,MedGen:CN236642;MedGen:C1969056,OMIM:611554;MedGen:C1969056,OMIM:611554;MeSH:C562393,MedGen:C0151779,SNOMED CT:93655004;MeSH:D009634,MedGen:C0028326,Orphanet:ORPHA648,SNOMED CT:205824006;MedGen:C1969057,OMIM:611553;MedGen:C1969057,OMIM:611553;MedGen:C0175704,Orphanet:ORPHA500;MedGen:CN166718,Orphanet:ORPHA98733;MedGen:CN517202 Adenocarcinoma of lung;Adenocarcinoma of stomach;Cardiomyopathy, dilated, 1NN;Colorectal Neoplasms;LEOPARD syndrome 2;LEOPARD syndrome 2;Malignant melanoma of skin;Noonan syndrome;Noonan syndrome 5;Noonan syndrome 5;Noonan syndrome with multiple lentigines;Rasopathy;not provided de novo;germline;somatic;unknown 3 12604200 CTGAAGGTTCCCTCTCCCAGAGGCAGAGGTCGACATCCACACCTAATGTCCACATGGTCAG 121909507 33409 NM_000751.2(CHRND):c.1390C>T (p.Arg464Ter) CHRND Feb 01, 2008 MedGen:C1854678,OMIM:253290,Orphanet:ORPHA33108,SNOMED CT:60192008 Lethal multiple pterygium syndrome germline 2 232535148 CCCTACCCACAGGAGAAAGACAGCTGGAACCGAGTGGCCCGCACAGTGGACCGCCTCTGCC 764698870 411514 NM_005476.5(GNE):c.1571C>T (p.Ala524Val) GNE Mar 01, 2017 MedGen:C1853926,OMIM:605820 Nonaka myopathy germline 9 36222839 TAGACAATGATGGCAACTGTGCTGCCCTGGCGGAAAGGAAATTTGGCCAAGGAAAGGGACT 1057517857 360049 NM_000260.3(MYO7A):c.3724C>T (p.Gln1242Ter) MYO7A Jan 25, 2016 MedGen:CN517202 not provided germline 11 77190113 AGAAGGACCTTTGTCAATGGGACACGGACACAGCCGCCCAGCTGGCTGGAGCTGCAGGTTC 199689137 39442 NM_022436.2(ABCG5):c.1336C>T (p.Arg446Ter) ABCG5 Jun 14, 2016 MedGen:C0342907,OMIM:210250,Orphanet:ORPHA2882,SNOMED CT:238104009 Sitosterolemia germline 2 43822924 ACCTGCCTTCCATCCCCAGTTCCCGTGCTGCGAGCTGTCAGCGACCAGGAGAGTCAGGACG 786202584 483785 NM_000038.5(APC):c.154C>T (p.Gln52Ter) APC Jun 19, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 5 112766344 TCTTTTTAACAGGAAGTACTTAAACAACTACAAGGAAGTATTGAAGATGAAGCTATGGCTT -1 487839 NM_000263.3(NAGLU):c.1597C>T (p.Arg533Ter) NAGLU Dec 23, 2016 MedGen:C0026706,SNOMED CT:88393000 Sanfilippo syndrome germline 17 42543603 CTACAGATGAATACCAGCATCTGGTACAACCGATCTGATGTGTTTGAGGCCTGGCGGCTGC 113994130 34067 NM_000642.2(AGL):c.2590C>T (p.Arg864Ter) AGL Jun 13, 2014 MedGen:C0017922,OMIM:232400,Orphanet:ORPHA308684,SNOMED CT:66937008 Glycogen storage disease type III germline 1 99884612 CCACATGCACAAGTCGCTGTTGGAATTCTTCGAAATCATCTGACACAATTCAGTCCTCACT 121918572 28200 NM_000448.2(RAG1):c.2326C>T (p.Arg776Trp) RAG1 Feb 01, 2009 MedGen:C1867362 Severe combined immunodeficiency, B cell-negative germline 11 36575630 AACCCTTACCATGAGTCTGTGGAAGAACTGCGGGATCGGGTGAAAGGGGTCTCAGCTAAAC 886039864 260739 NM_003611.2(OFD1):c.1612C>T (p.Gln538*) OFD1 Aug 04, 2016 MedGen:C1510460,OMIM:311200,Orphanet:ORPHA2750,SNOMED CT:52868006 Oral-facial-digital syndrome germline X 13758406 TACAAAGCTTCTGTAAAGAGTTTAACTACTCAGGTTGCCGATTTAAAATTGCAACTGAAGC 773246271 447471 NM_022089.3(ATP13A2):c.1903C>T (p.Gln635Ter) ATP13A2 Dec 05, 2016 MedGen:C1847640,OMIM:606693,Orphanet:ORPHA306674 Parkinson disease 9 germline 1 16992345 CTCCACCGCTTCCCCTTCTCTTCGGCTCTGCAGCGCATGAGTGTGGTGGTGGCGTGGCCAG 137852839 17728 NM_015404.3(WHRN):c.2332C>T (p.Arg778Ter) WHRN Aug 01, 2003 MedGen:C1846839,OMIM:607084 Deafness, autosomal recessive 31 germline 9 114403982 GCTGGCGAGGCAGAGGCCAGCGCCCCAGGCCGAGGAAGGCAGTCGGTGTCCACCAAGAGCA 777593389 353898 NM_017890.4(VPS13B):c.2158C>T (p.Gln720Ter) VPS13B Aug 21, 2015 MedGen:C0265223,OMIM:216550,Orphanet:ORPHA193,SNOMED CT:56604005 Cohen syndrome maternal 8 99156693 CAGTTGGTGCATGTGGTCAGCAGCCTTACTCAACCTTCTGATAACCTGCTTCATTATTGTT 760462252 226606 NM_000091.4(COL4A3):c.4382C>T (p.Pro1461Leu) COL4A3 Mar 18, 2016 MedGen:C1567743,OMIM:104200,Orphanet:ORPHA88918 Alport syndrome, autosomal dominant inherited 2 227307839 ACAGTCAAACCACAGCAATTCCTTCATGTCCAGAGGGGACAGTGCCACTCTACAGTGGGTT 121908683 21238 NM_003560.3(PLA2G6):c.1894C>T (p.Arg632Trp) PLA2G6 Jul 01, 2006 MedGen:C2750220 Karak syndrome germline 22 38115667 CCTTCCCCGCCCCTAGACCAGCTGGTGTGGCGGGCGGCCCGAAGCAGCGGGGCAGCTCCTA -1 470963 NM_006494.3(ERF):c.619C>T (p.Arg207Ter) ERF Jun 09, 2017 MedGen:CN029978,OMIM:123100 Craniosynostosis 1 germline 19 42249493 GAGGAACCGCTGGGAGAGGATCCCCGCGCCCGACCACCCGGCCCTCCGGATCTGGGTGCCT 74315290 27788 NM_198053.2(CD247):c.208C>T (p.Gln70Ter) CD247 May 04, 2006 MedGen:C1857798,OMIM:610163 Immunodeficiency due to defect in cd3-zeta unknown 1 167439355 GACGCCCCCGCGTACCAGCAGGGCCAGAACCAGCTCTATAACGTAAGTCAGCCTCGCCGTA 104886457 27086 NM_000136.2(FANCC):c.1642C>T (p.Arg548Ter) FANCC Nov 06, 2017 MedGen:C0015625,Orphanet:ORPHA84,SNOMED CT:30575002;MedGen:C3468041,OMIM:227645;MedGen:C3468041,OMIM:227645;MedGen:C0027672,SNOMED CT:699346009;MedGen:C1861028,OMIM:189960;MedGen:CN517202 Fanconi anemia;Fanconi anemia, complementation group C;Fanconi anemia, complementation group C;Hereditary cancer-predisposing syndrome;Tracheoesophageal fistula;not provided germline;unknown 9 95101742 ATTGAAAGCCCTAGATCAGAAAAACTGGCCCGAGAGCTCCTTAAAGAGCTGCGAACTCAAG 587781392 150666 NM_000038.5(APC):c.637C>T (p.Arg213Ter) APC Sep 01, 2017 MedGen:CN240755;MedGen:C2713442,OMIM:175100;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Familial adenomatous polyposis;Familial adenomatous polyposis 1;Hereditary cancer-predisposing syndrome;not provided germline;unknown 5 112780895 CAACTAGGTACCTGCCAGGATATGGAAAAACGAGCACAGGTAAGTTACTTGTTTCTAAGTG 398124503 102339 NM_138694.3(PKHD1):c.982C>T (p.Arg328Ter) PKHD1 Jan 06, 2016 MedGen:C0085548,OMIM:263200,Orphanet:ORPHA731,SNOMED CT:28770003 Autosomal recessive polycystic kidney disease germline;unknown 6 52062655 TTTATGCGATCTACATGTCTTACAGGCAATCGAGGGCTTCTTTTTGAAGTTGGAGATGCTG 776065839 405439 NM_001256850.1(TTN):c.82117C>T (p.Arg27373Ter) TTN Feb 09, 2017 MedGen:CN517202 not provided germline 2 178558419 GGTCTGAGAGAGAATTCTGAATACTTTTTCCGAGTGTTTGCTGAAAATCAAGCTGGCCTGA 727504107 177036 NM_015629.3(PRPF31):c.1273C>T (p.Gln425Ter) PRPF31 Oct 08, 2015 MedGen:C1838601,OMIM:600138 Retinitis pigmentosa 11 germline 19 54129183 GCCACCAAGGCCAGGATCTCCAAGACGCTGCAGGTATGGGCCAGACCCAGGTGGGGCTGGG 104894666 23663 NM_000479.4(AMH):c.571C>T (p.Arg191Ter) AMH Dec 01, 1992 MedGen:C3897939 Persistent mullerian duct syndrome, type I germline 19 2250667 CCCTGGTCTCCGCAGAGCCTCTGCCCCTCCCGAGACACCCGCTACCTGGTGTTAGCGGTGG 1057517704 359767 NM_020732.3(ARID1B):c.2776C>T (p.Gln926Ter) ARID1B Nov 25, 2016 MedGen:CN517202 not provided germline 6 157148848 ATGACCCCCAGTTCTCCTGGCATGTCTCAGCAGGGAGGGCCAGGAATGGGGCCGCCAATGC 28931603 15498 NM_000097.5(CPOX):c.1339C>T (p.Arg447Cys) CPOX May 01, 2016 MedGen:C0342856,SNOMED CT:190915002;MedGen:C0162531,OMIM:121300,Orphanet:ORPHA79273,SNOMED CT:7425008 Coproporphyria;Hereditary coproporphyria germline 3 98580709 TCCAAAGAAGCTGAAATTCTGGAAGTTCTACGCCATCCAAGGGACTGGGTGCGTTGATGCA -1 482003 NM_030813.5(CLPB):c.919C>T (p.Arg307Ter) CLPB Aug 30, 2017 MedGen:CN517202 not provided germline 11 72329751 GAAATGGGACACACACCCTTGGATTATGCCCGAGAAGGGGAAGTGATGAAGCTTCTGAGGA 80357133 70034 NM_007294.3(BRCA1):c.505C>T (p.Gln169Ter) BRCA1 Feb 06, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome germline 17 43099817 CTTGGAACTGTGAGAACTCTGAGGACAAAGCAGCGGATACAACCTCAAAAGACGTCTGTCT 1131690945 420725 NM_000455.4(STK11):c.913C>T (p.Gln305Ter) STK11 Mar 31, 2014 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 19 1221999 GCCAAGAGGTTCTCCATCCGGCAGATCCGGCAGCACAGGTGAGCGGCCCCTGGGGGCAGTG 764552042 428466 NM_000521.3(HEXB):c.1597C>T (p.Arg533Cys) HEXB Apr 19, 2016 MedGen:C0036161,OMIM:268800,Orphanet:ORPHA796,SNOMED CT:23849003 Sandhoff disease germline 5 74720731 GATGACGCCTATGACAGACTGACAAGGCACCGCTGCAGGATGGTCGAGTAAGAAATCTATT 545986367 171263 NM_000100.3(CSTB):c.136C>T (p.Gln46Ter) CSTB Apr 13, 2016 MedGen:C0751785,OMIM:254800,Orphanet:ORPHA308,SNOMED CT:230423006;MedGen:CN517202 Unverricht-Lundborg syndrome;not provided germline 21 43774690 CCTGTGTTTAAGGCCGTGTCATTCAAGAGCCAGGTGGTCGCGGGGACAAACTACTTCATCA 532768944 191704 NM_001127897.3(RPGRIP1L):c.2030C>T (p.Thr677Ile) RPGRIP1L Aug 12, 2014 MedGen:C1969053,OMIM:611560;MedGen:C1969052,OMIM:611561 Joubert syndrome 7;Meckel syndrome type 5 germline 16 53652657 ACTTATTTTTGCAATATATTCAGAAGAATACTATCACCCTTGAGGTCCACCAGGCTTATAG 29001571 22518 NM_001540.4(HSPB1):c.379C>T (p.Arg127Trp) HSPB1 Apr 07, 2017 MedGen:C1847823,OMIM:606595,Orphanet:ORPHA99940;MedGen:C2608087,OMIM:608634;MedGen:CN517202 Charcot-Marie-Tooth disease type 2F;Distal hereditary motor neuronopathy type 2B;not provided germline 7 76303816 CCTCTTCCCCCCAAAGGCAAGCACGAGGAGCGGCAGGACGAGCATGGCTACATCTCCCGGT 28937573 22132 NM_001040667.2(HSF4):c.355C>T (p.Arg119Cys) HSF4 Jul 01, 2002 Human Phenotype Ontology:HP:0007971,MedGen:C0266537,OMIM:116800 Lamellar cataract germline 16 67165841 GGCCGCGAGCAGCTACTGGAGCGCGTGCGGCGCAAGGTGGGGGCGGCCTGCGGGAATGAGC -1 427482 NM_001009944.2(PKD1):c.6199C>T (p.Gln2067Ter) PKD1 Apr 27, 2016 MedGen:C0085548,OMIM:263200,Orphanet:ORPHA731,SNOMED CT:28770003 Autosomal recessive polycystic kidney disease germline 16 2108968 GTTCAGGACGCCGTCCAGTATGTGGCCCTGCAGAGCGGCCCCTGCTTCACCAACCGCTCGG -1 485941 NM_000280.4(PAX6):c.820C>T (p.Gln274Ter) PAX6 Aug 02, 2017 MedGen:C0344542,OMIM:106210 Aniridia 1 unknown 11 31793748 AAATGGAGAAGAGAAGAAAAACTGAGGAATCAGAGAAGACAGGCCAGCAACACACCTAGTC 128626245 26293 NM_004006.2(DMD):c.3121C>T (p.Gln1041Ter) DMD Feb 15, 2017 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Duchenne muscular dystrophy germline X 32468539 AAGCTCTCCTCCCAGCTGGTTGAGCATTGTCAAAAGCTAGAGGAGCAAATGAATAAACTCC 587777273 131977 NM_020949.2(SLC7A14):c.395C>T (p.Ala132Val) SLC7A14 Mar 27, 2014 MedGen:C3810380,OMIM:615725 Retinitis pigmentosa 68 germline 3 170501255 ACAGCTATGTCACTGTTGGGGAATTTGTGGCATTTTTCATTGGCTGGAACCTGATCCTGGA 760815829 241643 NM_000059.3(BRCA2):c.1189C>T (p.Gln397Ter) BRCA2 Nov 01, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C0677776,Orphanet:ORPHA145 Breast-ovarian cancer, familial 2;Familial cancer of breast;Hereditary breast and ovarian cancer syndrome germline 13 32332667 GTTGTACCGTCTTTGGCCTGTGAATGGTCTCAACTAACCCTTTCAGGTCTAAATGGAGCCC 587783753 169961 NM_000252.2(MTM1):c.109C>T (p.Arg37Ter) MTM1 Nov 02, 2017 MedGen:C0410203,OMIM:310400,Orphanet:ORPHA596,SNOMED CT:46804001;MedGen:CN517202 Severe X-linked myotubular myopathy;not provided germline X 150596543 GTCAATCGAGATCTCACTGAGGCTGTTCCTCGACTTCCAGGAGAAACACTAATCACTGGTA 876661408 236877 NM_033312.2(CDC14A):c.1126C>T (p.Arg376Ter) CDC14A Jun 02, 2016 MedGen:C4310777,OMIM:616958 Deafness, autosomal recessive 105 germline 1 100484440 GGAAATCTTTCAAAAACACAAAACATGGAACGATTTGGAGAGGTAAGTTTTCCCTAGGAGA 724159945 171930 NM_001987.4(ETV6):c.1195C>T (p.Arg399Cys) ETV6 Feb 06, 2015 Human Phenotype Ontology:HP:0004377,MeSH:D019337,MedGen:C0376545,SNOMED CT:129154003;MedGen:CN130080;MedGen:C4015537,OMIM:616216 Hematologic neoplasm;Thrombocytopenia;Thrombocytopenia 5 germline 12 11885968 ATGACCTATGAGAAAATGTCCAGAGCCCTGCGCCACTACTACAAACTAAACATTATCAGGA 199474721 40534 NM_006757.3(TNNT3):c.187C>T (p.Arg63Cys) TNNT3 Jul 01, 2015 MedGen:CN233042;MedGen:CN517202 Arthyrgryposis, distal, type 2B;not provided germline 11 1933736 TGCCCCTGCCCACAGGACATCCAGAAGAAGCGTCAGAACAAAGACCTAATGGAGCTCCAGG 756868374 468818 NM_023036.5(DNAI2):c.1414C>T (p.Gln472Ter) DNAI2 Apr 04, 2017 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244 Ciliary dyskinesia germline 17 74310083 GACAATGGGTGTCTCATCGCCTGCGGCTCCCAGCTGGGGACAACCACCCTGCTGGAGGTCT 72558408 103159 NM_000531.5(OTC):c.604C>T (p.His202Tyr) OTC - MedGen:CN517202 not provided unknown X 38403681 AGCTGGATCGGGGATGGGAACAATATCCTGCACTCCATCATGATGAGCGCAGCGAAATTCG 796053263 201132 NM_006516.2(SLC2A1):c.1198C>T (p.Arg400Cys) SLC2A1 Jul 16, 2016 MedGen:C3149117;MedGen:CN517202 GLUT1 deficiency syndrome 1, autosomal recessive;not provided germline 1 42927685 ATCGTGGCTGAACTCTTCAGCCAGGGTCCACGTCCAGCTGCCATTGCCGTTGCAGGCTTCT 751323441 440111 NM_052844.3(WDR34):c.1480C>T (p.Gln494Ter) WDR34 Jun 01, 2017 MedGen:C0265275,Orphanet:ORPHA474,SNOMED CT:75049004 Jeune thoracic dystrophy unknown 9 128633875 CCTGTCTACTGTCTGGAGTTCAACAGCCAGCAGACTCAGCTCTTGGCTGCGGGCGATGCCC 62642575 105195 NM_000350.2(ABCA4):c.4610C>T (p.Thr1537Met) ABCA4 Jan 01, 2016 MeSH:C535804,MedGen:C1855465,OMIM:248200;MedGen:CN517202 Stargardt disease 1;not provided germline 1 94024978 ACAGGAACATCTCCGACTTCTTGGTAAAAACGTATCCTGCTCTTATAAGAAGCAGGTAAGA 121912702 33110 NM_000029.3(AGT):c.604C>T (p.Gln202Ter) AGT Feb 01, 2012 Human Phenotype Ontology:HP:0008660,MedGen:C0266313,OMIM:267430,SNOMED CT:204949001 Renal dysplasia germline 1 230710247 GTGGCCCAGGGCAGGGCTGATAGCCAGGCCCAGCTGCTGCTGTCCACGGTGGTGGGCGTGT 587780021 133177 NM_000465.3(BARD1):c.1690C>T (p.Gln564Ter) BARD1 Oct 06, 2017 MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Familial cancer of breast;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline 2 214745842 CTCCTTTTATATTAACAGATGAACACTGGGCAGCGTAGGGATGGACCTCTTGTACTTATAG 104894601 16611 NM_000263.3(NAGLU):c.700C>T (p.Arg234Cys) NAGLU Mar 01, 2008 MedGen:C0086648,OMIM:252920,Orphanet:ORPHA79270,SNOMED CT:59990008 Mucopolysaccharidosis, MPS-III-B germline 17 42538691 TTCCTCCAGCACCGGGTCCTGGACCAGATGCGCTCCTTCGGCATGACCCCAGTGCTGCCTG 368970223 269979 NM_213599.2(ANO5):c.1213C>T (p.Gln405Ter) ANO5 Jan 22, 2016 MedGen:C1969785,OMIM:611307,Orphanet:ORPHA206549 Limb-girdle muscular dystrophy, type 2L germline 11 22255403 ACCTTATTTTTGGAGTTTTGGAAACAACGACAAGCCAGACTGGAATATGAATGGGACCTGG 797045611 209173 NM_018486.2(HDAC8):c.229C>T (p.Gln77Ter) HDAC8 Oct 24, 2014 MedGen:C3550903,OMIM:300882 Cornelia de Lange syndrome 5 germline X 72568820 ATGGCCACCTTCCACACTGATGCTTATCTGCAGCATCTCCAGAAGGTCAGCCAAGAGGGCG 104894760 25892 NM_000054.4(AVPR2):c.310C>T (p.Arg104Cys) AVPR2 Oct 02, 2015 Human Phenotype Ontology:HP:0009806,MedGen:C0162283,Orphanet:ORPHA223,SNOMED CT:111395007;MedGen:C1563705,OMIM:304800 Nephrogenic diabetes insipidus;Nephrogenic diabetes insipidus, X-linked germline X 153905816 CTGCCCCAGCTGGCCTGGAAGGCCACCGACCGCTTCCGTGGGCCAGATGCCCTGTGTCGGG 886041739 264931 NM_001429.3(EP300):c.3472C>T (p.Gln1158Ter) EP300 May 02, 2016 MedGen:CN517202 not provided germline 22 41157379 GTCTTTGAACAAGAAATTGACCCAGTGATGCAAAGCCTTGGATACTGTTGTGGCAGAAAGG 886038199 249204 NM_133443.3(GPT2):c.815C>T (p.Pro272Leu) GPT2 Sep 22, 2016 MedGen:C4225388,OMIM:616281,Orphanet:ORPHA477673 Mental retardation, autosomal recessive 49 germline 16 46909922 AGGTGCTCTGCATAATCAACCCTGGGAACCCCACAGGTCTGCACTTTACTTCCTCACCAGT 28938175 21650 NM_004086.2(COCH):c.151C>T (p.Pro51Ser) COCH Sep 20, 2017 MedGen:C1832425,OMIM:601369;MedGen:CN043648,Orphanet:ORPHA87884 Deafness, autosomal dominant 9;Nonsyndromic hearing loss and deafness germline 14 30877640 ATCAGGAAAGAGAAAGCAGATGTCCTCTGCCCAGGGGGCTGCCCTCTTGAGGAATTCTCTG -1 472154 NM_021140.3(KDM6A):c.3016C>T (p.Gln1006Ter) KDM6A Feb 14, 2017 MedGen:C3275495,OMIM:300867 Kabuki syndrome 2 germline X 45079223 CATATGGTAGAAGTGAGGACACAGTTGTTGCAGCCAGCAGATGAAAACTGGGATCCCACTG 61752092 172126 NM_153818.1(PEX10):c.790C>T (p.Arg264Ter) PEX10 Jan 12, 2015 MedGen:C3553948,OMIM:614871 Peroxisome biogenesis disorder 6B germline 1 2406766 CTGCAGCTGTACGGTTTCAGGCAGCGGCAGCGAGCCAGGAAGGAGTGGAGGCTGCACCGCG 387907138 40159 NM_001004334.3(GPR179):c.598C>T (p.Arg200Ter) GPR179 Feb 10, 2012 MedGen:C3281215,OMIM:614565 Congenital stationary night blindness, type 1E germline 17 38343192 GGGGACCTGGACACCCCTGCCCTGAAGAAGCGAGTGTTGACCAATGACCTAGGGAGCCTCG 587777021 75240 NM_002067.4(GNA11):c.178C>T (p.Arg60Cys) GNA11 Jun 27, 2013 MedGen:C3809243,OMIM:615361 Hypocalcemia, autosomal dominant 2 germline 19 3110190 AGCGGGAAGAGCACGTTCATCAAGCAGATGCGCATCATCCACGGCGCCGGCTACTCGGAGG 121909495 26652 NM_005491.4(MAMLD1):c.2176C>T (p.Arg726Ter) MAMLD1 Dec 01, 2006 MedGen:C2677879,OMIM:300758 Hypospadias 2, X-linked germline X 150503409 CCCGGCAGCTCCTTTGCTCATGAGCTGGCCCGAGTCACCTCCTCGTACAGCACCTCAGAGG 63750356 94856 NM_000179.2(MSH6):c.3436C>T (p.Gln1146Ter) MSH6 May 27, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Hereditary cancer-predisposing syndrome;Lynch syndrome germline 2 47803683 AATATGGGGGGCAAGTCTACGCTTATGAGACAGGTAACTGATTCTTAAAGTTTTGTTATCA 112795301 33467 NM_032682.5(FOXP1):c.1573C>T (p.Arg525Ter) FOXP1 Nov 12, 2010 MedGen:C3150923,OMIM:613670 Mental retardation with language impairment and with or without autistic features de novo;germline 3 70972634 CATAATCTTAGTCTTCACAAGTGTTTTGTGCGAGTAGAAAACGTTAAAGGGGCAGTATGGA 121913675 28927 NM_001127500.2(MET):c.3572C>T (p.Thr1191Ile) MET Oct 07, 2013 MedGen:C0279606 Childhood hepatocellular carcinoma somatic 7 116778953 GAGATCTTCGAAATTTCATTCGAAATGAGACTCATGTAAGTTGACTGCCAAGCTTACTAAC 72547571 16679 NM_000382.2(ALDH3A2):c.943C>T (p.Pro315Ser) ALDH3A2 Oct 04, 2016 MedGen:C0037231,OMIM:270200,Orphanet:ORPHA816,SNOMED CT:111303009;MedGen:CN517202 Sjögren-Larsson syndrome;not provided germline;unknown 17 19663335 ATTTTCATTTTGTTTATTTTCTTTTTAGCCCCAACAGTACTTACCGATGTTGATCCTAAAA 74315456 18093 NM_000487.5(ARSA):c.293C>T (p.Ser98Phe) ARSA Dec 09, 2014 MedGen:C0023522,OMIM:250100,Orphanet:ORPHA512,SNOMED CT:396338004;MedGen:C0751278,Orphanet:ORPHA309256 Metachromatic leukodystrophy;Metachromatic leukodystrophy, late infantile germline;unknown 22 50627338 GCATGTACCCTGGCGTCCTGGTGCCCAGCTCCCGGGGGGGCCTGCCCCTGGAGGAGGTGAC 876658802 432575 NM_000038.5(APC):c.1333C>T (p.Gln445Ter) APC Feb 28, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline 5 112821916 TATTTTTCAGTGCCAGCTCCTGTTGAACATCAGATCTGTCCTGCTGTGTGTGTTCTAATGA 730881762 419392 NM_000251.2(MSH2):c.2041C>T (p.Gln681Ter) MSH2 Sep 22, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0009405,Orphanet:ORPHA443090;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Hereditary nonpolyposis colon cancer;Lynch syndrome;not provided germline 2 47476402 AATATGGGAGGTAAATCAACATATATTCGACAAACTGGGGTGATAGTACTCATGGCCCAAA 267606847 17118 NM_020435.3(GJC2):c.143C>T (p.Ser48Leu) GJC2 Apr 01, 2011 MedGen:C3150732,OMIM:613480 Lymphedema, hereditary, IC germline 1 228157901 TGACGGCTGTGGGCGGCGAGGCCATCTACTCGGACGAGCAGGCCAAGTTCACTTGCAACAC 121918304 19848 NM_012179.3(FBXO7):c.1492C>T (p.Arg498Ter) FBXO7 Jan 20, 2009 MedGen:C1850100,OMIM:260300,Orphanet:ORPHA171695 Parkinson disease 15 germline 22 32498453 CTTCCAGGACCTAACCCCATCTTGCCAGGGCGAGGCGGCCCCAATGACAGATTTCCCTTTA 886042691 267950 NM_004006.2(DMD):c.10279C>T (p.Gln3427Ter) DMD Oct 02, 2015 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009;MedGen:C3668940,OMIM:302045;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Becker muscular dystrophy;Dilated cardiomyopathy 3B;Duchenne muscular dystrophy germline X 31173588 TTTCTGCCTTATAGGCCTGCCTCGTCCCCTCAGCTTTCACACGATGATACTCATTCACGCA 863224462 212905 NM_000051.3(ATM):c.7240C>T (p.Gln2414Ter) ATM Mar 07, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0027672,SNOMED CT:699346009 Ataxia-telangiectasia syndrome;Hereditary cancer-predisposing syndrome germline 11 108329171 TACATGAAATCATCGGAATTTGAAAACAAGCAAGCTCTCCTGAAAAGAGCCAAAGAGGAAG 774799167 359573 NM_014845.5(FIG4):c.2212C>T (p.Gln738Ter) FIG4 Nov 03, 2016 MedGen:CN517202 not provided germline 6 109791407 AACAAAAGCAATAGAGAAGAAGCTGTATTACAGCGGAAAACGGCAGCCAGCGCCCCGCCGC 28940290 17325 NM_015046.5(SETX):c.6638C>T (p.Pro2213Leu) SETX Mar 01, 2004 MedGen:C1853761,OMIM:606002 Spinocerebellar ataxia autosomal recessive 1 germline 9 132281483 TCCTAGTAGGAGATCCTAAGCAGCTCCCTCCGACAGTCATCTCTATGGTAAGTTTTTTATG 778989252 236615 NM_007194.3(CHEK2):c.1315C>T (p.Gln439Ter) CHEK2 Aug 04, 2017 MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Familial cancer of breast;Hereditary cancer-predisposing syndrome;not provided germline;unknown 22 28695187 GAGCATAGGACTCAAGTGTCACTGAAGGATCAGATCACCAGTGGAAAATACAACTTCATTC 189014161 178574 NM_000238.3(KCNH2):c.2230C>T (p.Arg744Ter) KCNH2 May 12, 2017 MeSH:D008133,MedGen:C0023976,SNOMED CT:9651007;MedGen:C3150943,OMIM:613688;MedGen:CN517202 Long QT syndrome;Long QT syndrome 2;not provided germline 7 150950336 CGCTCACTGCTGCAGCACTGCAAACCCTTCCGAGGGGCCACCAAGGGCTGCCTTCGGGCCC 1057520217 377038 NM_000022.3(ADA):c.7C>T (p.Gln3Ter) ADA Jan 24, 2017 MedGen:CN517202 not provided germline 20 44651601 AGCGCCGGGGCGCACGAGGGCACCATGGCCCAGACGCCCGCCTTCGACAAGCCCAAAGTGA 121913409 32627 NM_001904.3(CTNNB1):c.134C>T (p.Ser45Phe) CTNNB1 May 31, 2016 Human Phenotype Ontology:HP:0030078,MeSH:C538231,MedGen:C0152013;MedGen:C0007112;Human Phenotype Ontology:HP:0006744,MeSH:D018268,MedGen:C0206686,Orphanet:ORPHA1501;MeSH:D015179,MedGen:CN236642;MeSH:D004194,MedGen:C0012634;MedGen:C2239176,OMIM:114550,Orphanet:ORPHA88673,SNOMED CT:187769009,SNOMED CT:25370001;Human Phenotype Ontology:HP:0002861,MeSH:D008545,MedGen:C0025202,SNOMED CT:2092003;MeSH:C562393,MedGen:C0151779,SNOMED CT:93655004;MedGen:C0153574,Orphanet:ORPHA213569;Human Phenotype Ontology:HP:0006740,MedGen:C0279680;MedGen:CN865585 Adenocarcinoma of lung;Adenocarcinoma of prostate;Adrenocortical carcinoma;Colorectal Neoplasms;Disease;Hepatocellular carcinoma;Malignant melanoma;Malignant melanoma of skin;Malignant neoplasm of body of uterus;Transitional cell carcinoma of the bladder;Wilms Tumor somatic 3 41224646 TCCATTCTGGTGCCACTACCACAGCTCCTTCTCTGAGTGGTAAAGGCAATCCTGAGGAAGA 1801175 27037 NM_000151.3(G6PC):c.247C>T (p.Arg83Cys) G6PC Oct 06, 2017 MedGen:C2919796,OMIM:232200;MedGen:C0017920,SNOMED CT:7265005;MedGen:CN517202 Glycogen storage disease type 1A;Glycogen storage disease, type I;not provided germline;unknown 17 42903947 CTGTTTTTCCATAGGATTCTCTTTGGACAGCGTCCATACTGGTGGGTTTTGGATACTGACT 202247807 46962 NM_014252.3(SLC25A15):c.823C>T (p.Arg275Ter) SLC25A15 May 31, 2012 MedGen:C0268540,OMIM:238970,Orphanet:ORPHA415,SNOMED CT:30287008 Hyperornithinemia-hyperammonemia-homocitrullinuria syndrome not provided 13 40809584 TTATATTCTGGACTGAAACCTACTATGATTCGAGCATTCCCTGCCAATGGAGCACTCTTTT 121913024 31827 NM_000400.3(ERCC2):c.1846C>T (p.Arg616Trp) ERCC2 Apr 25, 2017 MedGen:C0220722,OMIM:214150,SNOMED CT:41283003;MedGen:C1853102,OMIM:610756;MedGen:C0268138,OMIM:278730,SNOMED CT:68637004 Cerebro-oculo-facio-skeletal syndrome;Cerebrooculofacioskeletal syndrome 2;Xeroderma pigmentosum, group D germline 19 45352802 CTCCTCTGCCCACCAGTGCACCACTACGGGCGGGCCGTCATCATGTTTGGCGTCCCCTACG 727504283 175511 NM_000257.3(MYH7):c.596C>T (p.Ala199Val) MYH7 Apr 29, 2015 MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Primary familial hypertrophic cardiomyopathy;not provided germline 14 23431804 AGAGGGTCATCCAGTACTTTGCTGTTATTGCAGCCATTGGGGACCGCAGCAAGAAGGACCA 962135951 377826 NM_012213.2(MLYCD):c.946C>T (p.Gln316Ter) MLYCD Jun 01, 2015 MedGen:CN517202 not provided germline 16 83912365 TTCCTCATAAAGCGAGTCGTCAAGGAGTTGCAGGTAAGCGACACGCAGGGAGCCCCGGTCA 375638381 455351 NM_000426.3(LAMA2):c.2836C>T (p.Gln946Ter) LAMA2 Aug 01, 2017 MedGen:CN117977 Laminin alpha 2-related dystrophy germline 6 129291700 CAGTGTGAGTGCAGAGCCAACGTTCAGGGTCAGAGATGTGACAAATGCAAGGTAAGGAGTA 122453119 26729 NM_004484.3(GPC3):c.361C>T (p.His121Tyr) GPC3 Jan 09, 2012 MedGen:CN033288,OMIM:194070 Wilms tumor 1 somatic X 133754153 TTTACAGAGGCCTTTGAAATTGTTGTTCGCCATGCCAAGAACTACACCAATGCCATGTTCA 267607145 20040 NM_021625.4(TRPV4):c.946C>T (p.Arg316Cys) TRPV4 Apr 16, 2017 MedGen:C0007959,Orphanet:ORPHA166,SNOMED CT:50548001;MedGen:C2079540,OMIM:606071;MedGen:C0027868,Orphanet:ORPHA68381;MedGen:C0751335,OMIM:181405,Orphanet:ORPHA431255,SNOMED CT:230248006;MedGen:CN517202 Charcot-Marie-Tooth disease;Charcot-Marie-Tooth disease type 2C;Neuromuscular Diseases;Scapuloperoneal spinal muscular atrophy;not provided germline 12 109798820 GAGAACCCCCACAAGAAGGCGGACATGCGGCGCCAGGACTCGCGAGGCAACACAGTGCTGC 797045379 209279 NM_000052.6(ATP7A):c.3502C>T (p.Gln1168Ter) ATP7A Feb 08, 2013 MedGen:C0022716,OMIM:309400,Orphanet:ORPHA565,SNOMED CT:59178007 Menkes kinky-hair syndrome germline X 78033812 TCAACTTCGTCTTCCATGATTATTGATGCCCAGATCTCAAGTAAGCTAATTTTCTTTGTAG 1085307242 414178 NM_001204.6(BMPR2):c.541C>T (p.Q181*) BMPR2 Aug 31, 2015 MedGen:C0152171,OMIM:178600,SNOMED CT:26174007;MedGen:CN517202 Primary pulmonary hypertension;not provided germline 2 202514899 CTGTTTCCTGTTCTTATAGGAGACCGTAAACAAGGTCTTCACAGTATGAACATGATGGAGG 749588235 481208 NM_006567.4(FARS2):c.461C>T (p.Ala154Val) FARS2 Jan 30, 2018 MedGen:C4310750,OMIM:617046,Orphanet:ORPHA466722 Spastic paraplegia 77, autosomal recessive germline 6 5369031 ATTACCTGAATCGGACTCACATGCTGAGAGCGCACACGTCTGCACACCAGTGGGACTTGCT 77216276 486898 NM_001165963.2(SCN1A):c.5734C>T (p.Arg1912Ter) SCN1A Feb 03, 2016 MedGen:CN240682 Autosomal dominant epilepsy germline 2 165991541 TCCTATCAGCCAATCACTACTACTTTAAAACGAAAACAAGAGGAAGTATCTGCTGTCATTA 138941496 259971 NM_000051.3(ATM):c.7792C>T (p.Arg2598Ter) ATM Aug 16, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline 11 108332765 GTAATGTTTTTTGTTTTTTATTAATAGGATCGAACAGAGGCTGCAAATAGAATAATATGTA 886043410 270734 NM_001844.4(COL2A1):c.2353C>T (p.Arg785Ter) COL2A1 Dec 07, 2017 MedGen:C2020284,OMIM:108300;MedGen:CN517202 Stickler syndrome type 1;not provided germline 12 47982109 CCTGAGGGAGCCCCTGGAAAGGATGGTGGACGAGTAAGTGAATGCGGGCTGCTGGACTGCT 74315491 29863 NM_020070.3(IGLL1):c.64C>T (p.Gln22Ter) IGLL1 Jan 05, 1998 MedGen:C3150750,OMIM:613500 Agammaglobulinemia 2, autosomal recessive germline 22 23580127 GCCCCTGGTGAGCCAGGCCCCAACCTCAGGCAGCGCTGGCCCCTGCTGCTGCTGGGTCTGG 118203427 58245 NM_000368.4(TSC1):c.682C>T (p.Arg228Ter) TSC1 May 18, 2017 MedGen:C1846385,OMIM:607341,Orphanet:ORPHA268994;MedGen:C0751674,OMIM:606690,Orphanet:ORPHA538,SNOMED CT:73017001;MedGen:C1854465,OMIM:191100;MedGen:C1854465,OMIM:191100;MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000;MedGen:CN517202 Focal cortical dysplasia type II;Lymphangiomyomatosis;Tuberous sclerosis 1;Tuberous sclerosis 1;Tuberous sclerosis syndrome;not provided germline;unknown 9 132921418 CAACTCTTCTAGCCAATGATGGAGCATGTGCGAATTCATCCGGAATTAGTGACTGGATCCA 267606943 15257 NM_000285.3(PEPD):c.605C>T (p.Ser202Phe) PEPD Apr 06, 2015 MedGen:C0268532,OMIM:170100 Prolidase deficiency germline 19 33464006 TGGAGGTTCTGCGCTATACCAATAAAATCTCCAGCGAGGCCCACCGTGAGGTAAGTCAGGC 758478717 204587 NM_003995.3(NPR2):c.328C>T (p.Arg110Cys) NPR2 Apr 01, 2014 MedGen:C4225399,OMIM:616255 Short stature with nonspecific skeletal abnormalities germline 9 35792736 GGTTGCGTGTACCCTGCTGCCTCTGTGGCCCGCTTTGCCTCCCACTGGCGCCTTCCCCTGC 80356485 33913 NM_000151.3(G6PC):c.724C>T (p.Gln242Ter) G6PC Aug 25, 2016 MedGen:C2919796,OMIM:232200 Glycogen storage disease type 1A germline;unknown 17 42911076 GTAGACCTCCTGTGGACTCTGGAGAAAGCCCAGAGGTGGTGCGAGCAGCCAGAATGGGTCC 776327443 414933 NM_000404.3(GLB1):c.1646C>T (p.Pro549Leu) GLB1 Apr 27, 2017 MedGen:CN517202 not provided germline 3 33014144 GGGCCCACAACTCATCCAACTACACGCTCCCGGCCTTTTATATGGGGAACTTCTCCATTCC 121908642 21369 NM_000050.4(ASS1):c.910C>T (p.Arg304Trp) ASS1 Sep 01, 2016 MedGen:C0175683,OMIM:215700,Orphanet:ORPHA187 Citrullinemia type I germline 9 130489404 CATTTAGACATCGAGGCCTTCACCATGGACCGGGAAGTGCGCAAAATCAAACAAGGCCTGG 104894209 22331 NM_001814.5(CTSC):c.856C>T (p.Gln286Ter) CTSC Dec 01, 1999 MedGen:C0030360,OMIM:245000,Orphanet:ORPHA678,SNOMED CT:40158001 Papillon-Lefèvre syndrome germline 11 88296166 AACAATTCTCAGACCCCAATCCTAAGCCCTCAGGAGGTTGTGTCTTGTAGCCAGTATGCTC -1 417112 NM_019098.4(CNGB3):c.1243C>T (p.Gln415Ter) CNGB3 Mar 27, 2017 MedGen:C1849792,OMIM:262300 Achromatopsia 3 unknown 8 86632829 TTAATTACCATTGGTGGCCTTCCAGAACCACAAACTTTATTTGAAATTGTTTTTCAACTCT 121918620 27969 NM_000702.3(ATP1A2):c.1127C>T (p.Thr376Met) ATP1A2 Jan 01, 2007 MedGen:C1865322,OMIM:602481 Familial hemiplegic migraine type 2 germline 1 160128761 GCTCCACGTCCACCATCTGCTCGGACAAGACGGGCACCCTCACCCAGAACCGCATGACCGT 281864781 49805 NM_212472.2(PRKAR1A):c.109C>T (p.Gln37Ter) PRKAR1A Sep 20, 2012 MedGen:C2607929,OMIM:160980 Carney complex, type 1 not provided 17 68515508 ATTCAAGCGCTGCTCAAAGATTCTATTGTGCAGTTGTGCACTGCTCGACCTGAGAGACCCA 121912670 33376 NM_005199.4(CHRNG):c.715C>T (p.Arg239Cys) CHRNG Aug 01, 2006 MedGen:C1854678,OMIM:253290,Orphanet:ORPHA33108,SNOMED CT:60192008;MedGen:C0265261,OMIM:265000,Orphanet:ORPHA294060 Lethal multiple pterygium syndrome;Multiple pterygium syndrome Escobar type germline 2 232542992 CAGAAGGTGGTGTTCTACCTGCTCATCCAGCGCAAGCCCCTCTTCTACGTCATCAACATCA 397509301 70314 NM_007294.3(BRCA1):c.616C>T (p.Gln206Ter) BRCA1 Jan 12, 2015 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 17 43095900 CCCTATAGTGTGGGAGATCAAGAATTGTTACAAATCACCCCTCAAGGAACCAGGGATGAAA 137853095 22702 NM_032387.4(WNK4):c.3553C>T (p.Arg1185Cys) WNK4 Feb 16, 2017 MedGen:C1840390,OMIM:614491,Orphanet:ORPHA88939 Pseudohypoaldosteronism type 2B germline 17 42796244 ATTGTGGCCCCAGCTGCTATGCTGTCCAGCCGCCAGCGCCGCCTCTCCAAGGGCAGCTTCC 780139133 359611 NM_021942.5(TRAPPC11):c.2407C>T (p.Gln803Ter) TRAPPC11 Nov 15, 2016 MedGen:CN517202 not provided germline 4 183693937 ACTCTTTTAGGACAGGATGCCAATTTAACTCAGAAGACTCACGTGACTCTTCATGGAACAG 28940889 18607 NM_002225.3(IVD):c.941C>T (p.Ala314Val) IVD Jun 29, 2017 MedGen:C0268575,OMIM:243500,Orphanet:ORPHA33,SNOMED CT:87827003;MedGen:CN517202 Isovaleryl-CoA dehydrogenase deficiency;not provided germline;unknown 15 40415454 ACACCATTCCCTACCTGCACGTGAGGGAAGCCTTTGGCCAGAAGATCGGCCACTTCCAGGT 118204029 16532 NM_001039141.2(TRIOBP):c.2362C>T (p.Arg788Ter) TRIOBP Jan 01, 2006 MedGen:C1853276,OMIM:609823 Deafness, autosomal recessive 28 germline 22 37724918 CCCAGGACCTCCTCTCCCAATAGAGCCACACGAGACAACCCCAGAACATCCTGTGCCCAGC 72547508 32556 NM_000781.2(CYP11A1):c.1057C>T (p.Arg353Trp) CYP11A1 Aug 01, 2002 MedGen:C3151055,OMIM:613743,Orphanet:ORPHA168558 Adrenal insufficiency, congenital, with 46,XY sex reversal, partial or complete germline 15 74339687 GCACGCAACCTGAAGGTGCAGGATATGCTGCGGGCAGAGGTCTTGGCTGCGCGGCACCAGG 267606832 31266 NM_004960.3(FUS):c.646C>T (p.Arg216Cys) FUS Aug 10, 2012 MedGen:C1842675,OMIM:608030;MedGen:C3539195,OMIM:614782 Amyotrophic lateral sclerosis type 6;Tremor, hereditary essential, 4 germline 16 31185061 GGTGGCTATGGACAGCAGGACCGTGGAGGCCGCGGCAGGGGTGGCAGTGGTGGCGGCGGCG 539703340 263633 NM_181789.3(GLDN):c.1240C>T (p.Arg414Ter) GLDN Nov 09, 2016 MedGen:C4310670,OMIM:617194 Lethal congenital contracture syndrome 11 germline 15 51404338 CTGAAGCTTGAAAATGCCTTGTATTTTGATCGAAAATACCTTTTTGCAAATTCCAAAACTT 1064793992 406097 NM_000388.3(CASR):c.577C>T (p.Gln193Ter) CASR Aug 17, 2015 MedGen:CN517202 not provided germline 3 122261612 TTCCTCCGAACCATCCCCAATGATGAGCACCAGGCCACTGCCATGGCAGACATCATCGAGT 120074158 17851 NM_025074.6(FRAS1):c.3799C>T (p.Gln1267Ter) FRAS1 Jun 01, 2003 MedGen:C0265233,OMIM:219000,SNOMED CT:204102004 Cryptophthalmos syndrome germline 4 78387525 ATCGATCCTCCACTTCATGGCCAATTGCTTCAGACACTTCAGTCCCCGGCAACCCCTATCT 118192226 34614 NM_172107.3(KCNQ2):c.1342C>T (p.Arg448Ter) KCNQ2 Jul 19, 2017 MedGen:C1852587,OMIM:121200;MedGen:C0393706,Orphanet:ORPHA1934;MedGen:CN517202 Benign familial neonatal seizures 1;Early infantile epileptic encephalopathy;not provided germline 20 63415086 AGTTTGAAAGATCGTGTCTTCTCCAGCCCCCGAGGCGTGGCTGCCAAGGGGAAGGGGTCCC 397514482 40317 NM_000933.3(PLCB4):c.1861C>T (p.Arg621Cys) PLCB4 Mar 01, 2013 Gene:100381211,MedGen:C1865295,OMIM:602483;MedGen:C3553404,OMIM:614669 Auriculocondylar syndrome 1;Auriculocondylar syndrome 2 germline;inherited 20 9409079 AGTTACAGTTATAACAAACGGCAAATGAGTCGCATTTACCCCAAGGGAGGCCGAGTCGATT 80338696 34600 NM_138477.3(CDAN1):c.2140C>T (p.Arg714Trp) CDAN1 Sep 01, 2011 MedGen:C0271933,OMIM:224120,Orphanet:ORPHA98869,SNOMED CT:59548005 Congenital dyserythropoietic anemia, type I not provided 15 42730632 GACCATGTTGTTCCCTTGCTGGAATATTACCGGGACATCTTCACTCTCCTGCTGCGCCTGC 587784179 168252 NM_022455.4(NSD1):c.6070C>T (p.Gln2024Ter) NSD1 Jun 15, 2017 MedGen:CN035106,OMIM:117550;MedGen:CN517202 Sotos syndrome 1;not provided germline 5 177283847 AACTATGCTCGGTTCATGAATCATTGCTGCCAGCCCAACTGTGAAACACAGAAGTGGTCTG -1 481216 NM_017780.3(CHD7):c.3106C>T (p.Arg1036Ter) CHD7 Oct 27, 2017 MedGen:C0265354,OMIM:214800,Orphanet:ORPHA138,SNOMED CT:47535005;MedGen:CN517202 CHARGE association;not provided de novo;germline 8 60822651 TCCACAATCCCCAACTGGGAAAGGGAATTCCGAACCTGGACAGAGTTGAACGTGGTTGTGT 1060499984 419804 NM_130799.2(MEN1):c.1177C>T (p.Gln393Ter) MEN1 Dec 20, 2013 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 11 64805643 CTGGAGGCGGGCGAGGAGCGGCCGGGGGAGCAAAGCCAGGTGAAAGGCTGGAGCTCCAGCC 587783883 168338 NM_133433.3(NIPBL):c.1297C>T (p.Gln433Ter) NIPBL Feb 08, 2013 MedGen:CN029798,OMIM:122470 Cornelia de Lange syndrome 1 germline 5 36976204 CAAGAACAAACAGCATTCCTTCCAGCAAATCAAGTGCCTGTTTTACAACAGAACACTTCAG 80359825 196002 NM_006516.2(SLC2A1):c.997C>T (p.Arg333Trp) SLC2A1 Nov 04, 2015 MedGen:C3553859,OMIM:614847;MedGen:CN030711,OMIM:606777;MedGen:C1847501,Orphanet:ORPHA71277 Epilepsy, idiopathic generalized, susceptibility to, 12;GLUT1 deficiency syndrome 1;Glucose transporter type 1 deficiency syndrome germline 1 42929009 CCACAGCTGTTTGTGGTGGAGCGAGCAGGCCGGCGGACCCTGCACCTCATAGGCCTCGCTG -1 481705 NM_001080517.2(SETD5):c.1852C>T (p.Arg618Ter) SETD5 Jan 02, 2018 MedGen:CN517202 not provided germline 3 9447755 GCAAAGCCTTCTAGGCCCCGGCCGAAGAGTCGAATTTCTCGGTACAGGACCAGTTCAGCCC 121912602 17385 NM_016341.3(PLCE1):c.3346C>T (p.Arg1116Ter) PLCE1 Dec 01, 2006 MedGen:C1853124,OMIM:610725 Nephrotic syndrome, type 3 germline 10 94254256 ACCCGAAAGGCCAAGATGCACAAAGAGTGTCGAAGCCGGAGTGGTTCTGATCCTCAAGACA 104894857 25020 NM_001122606.1(LAMP2):c.520C>T (p.Gln174Ter) LAMP2 Aug 01, 2004 MedGen:C0878677,OMIM:300257,Orphanet:ORPHA34587,SNOMED CT:419097006 Danon disease germline X 120449006 GTTGTCCAACACTACTGGGATGTTCTTGTACAAGCTTTTGTCCAAAATGGCACAGTGAGCA 191710555 389248 NM_016239.3(MYO15A):c.1223C>T (p.Ala408Val) MYO15A Jun 04, 2016 MedGen:C1838263,OMIM:600316 Deafness, autosomal recessive 3 germline 17 18120023 CCTATTTTTACCCGGAGGAGTCGGCTTCGGCCTTTGTGTACCCCTGGGTACCACCGCCCAT 121965004 26977 NM_000056.4(BCKDHB):c.616C>T (p.His206Tyr) BCKDHB Apr 23, 2004 MedGen:C4016442 MAPLE SYRUP URINE DISEASE, CLASSIC, TYPE IB germline 6 80169013 CATTCTCAGAGTCCTGAAGCATTTTTTGCCCATTGCCCAGGAATCAAGGTATGTTCATTTA 121918154 15710 NM_000312.3(PROC):c.814C>T (p.Arg272Cys) PROC Jan 16, 1993 MedGen:C2674321,OMIM:176860 Thrombophilia, hereditary, due to protein C deficiency, autosomal dominant germline 2 127428374 CTCTGCCCTGCAGGAGAGTATGACCTGCGGCGCTGGGAGAAGTGGGAGCTGGACCTGGACA 72556266 103099 NM_000531.5(OTC):c.455C>T (p.Ala152Val) OTC - MedGen:CN517202 not provided unknown X 38401343 TGTATAAACAATCAGATTTGGACACCCTGGCTAAAGAAGCATCCATCCCAATTATCAATGG -1 478600 NM_002878.3(RAD51D):c.463C>T (p.Gln155Ter) RAD51D Oct 17, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 17 35107005 CGCCTCCTCCAGCTGCTTCAGGCTAAAACCCAGGATGAGGAGGAACAGGTAAGGGCAGGAT 137853052 22098 NM_001172435.1(RAB3GAP1):c.2011C>T (p.Arg671Ter) RAB3GAP1 Jan 01, 2007 MedGen:C1838625,OMIM:600118 Warburg micro syndrome 1 germline 2 135150456 TTAGGTACATCGGCAGAGGGGGCTCACCTTCGAGCACGCATGCAGAGTGCCTGTCTGCTCT 879255269 227579 NM_012200.3(B3GAT3):c.419C>T (p.Pro140Leu) B3GAT3 May 13, 2016 na MULTIPLE JOINT DISLOCATIONS, SHORT STATURE, AND CRANIOFACIAL DYSMORPHISM WITHOUT CONGENITAL HEART DEFECTS germline 11 62617186 TCCTCTTCACACACCTGGTGGTCCTCACGCCCAAAGCCCAGCGGCTTCGGGAGGGCGAGCC 587782030 151527 NM_005591.3(MRE11):c.508C>T (p.Gln170Ter) MRE11 Mar 14, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 11 94478771 GAGAAGATAGACATTAGTCCGGTTTTGCTTCAAAAAGGAAGCACAAAGATTGCGCTATATG 747480526 260145 NM_006086.3(TUBB3):c.533C>T (p.Thr178Met) TUBB3 Nov 07, 2017 MedGen:C3279670,OMIM:614039;MedGen:CN517202 Cortical dysplasia, complex, with other brain malformations 1;not provided germline 16 89934984 GCGTCGTGCCCTCACCCAAGGTGTCAGACACGGTGGTGGAGCCCTACAACGCCACGCTGTC 397514470 39195 NM_006225.3(PLCD1):c.1246C>T (p.Arg416Ter) PLCD1 Jun 10, 2011 MedGen:C0544855,OMIM:151600,Orphanet:ORPHA2387 Leukonychia totalis germline 3 38009945 CATGCCATCCTGGGCCCCATGCTGTTGAACCGACCACTGGATGGGGTCACCAACAGCCTGC 121913572 29335 NM_000426.3(LAMA2):c.7732C>T (p.Arg2578Ter) LAMA2 Apr 05, 2013 MedGen:C1263858,OMIM:607855,Orphanet:ORPHA258,SNOMED CT:111503008 Merosin deficient congenital muscular dystrophy germline 6 129481422 GGAGGGACACCAGCACCACCTAGGAGAAAACGAAGGCAGACTGGACAGGTACCCTCACACC 121434620 25834 NM_020717.3(SHROOM4):c.3266C>T (p.Ser1089Leu) SHROOM4 Jan 01, 2006 MedGen:C1845530,OMIM:300434,Orphanet:ORPHA85288 Stocco dos Santos syndrome germline X 50607876 AGCTCTTTAGCAAAGGTGATGAGACCCAGTCGGATCTTCTCGGAGCCAGGAAGAAGGCCTT 587783370 167937 NM_003688.3(CASK):c.82C>T (p.Arg28Ter) CASK Feb 07, 2017 MedGen:C2677903,OMIM:300749,Orphanet:ORPHA163937;MedGen:CN517202 Mental retardation and microcephaly with pontine and cerebellar hypoplasia;not provided germline X 41853205 TTTTATAGGGGTCCCTTCAGTGTTGTACGACGATGTATCAACAGAGAAACTGGGCAACAAT 876659454 234244 NM_000051.3(ATM):c.6082C>T (p.Gln2028Ter) ATM Sep 21, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 11 108315898 TTGTATGGCTGTGGTGGAGGGAAGATGTTACAACCCATTACTAGGTAAATTGCATTTTTCT 727503778 178381 NM_005641.3(TAF6):c.136C>T (p.Arg46Cys) TAF6 Sep 22, 2016 MedGen:C4310702,OMIM:617126;MedGen:CN029798,OMIM:122470 Alazami-Yuan syndrome;Cornelia de Lange syndrome 1 biparental;germline 7 100114074 TGCCAGCTGCTAACGGATGAGGTCAGCTACCGCATCAAAGAGATCGCACAGGTGACCCGGC 121918697 27597 NM_001252634.1(THRB):c.1012C>T (p.Arg338Trp) THRB Jun 25, 2013 MedGen:C2937288,OMIM:188570;MedGen:C1840364,OMIM:145650,Orphanet:ORPHA165994 Thyroid hormone resistance, generalized, autosomal dominant;Thyroid hormone resistance, selective pituitary germline;unknown 3 24127631 TTAACCTTGAATGGGGAAATGGCAGTGACACGGGGCCAGCTGAAAAATGGGGGTCTTGGGG 587783681 168927 NM_003482.3(KMT2D):c.11263C>T (p.Gln3755Ter) KMT2D Dec 02, 2013 MedGen:CN030661,OMIM:147920 Kabuki syndrome 1 germline 12 49033442 CAGCACCTTCTAGGACAGGTGGCAATCCAGCAGCAACAGCAGCAGGGTCCTGGAGTACAGA 121908735 17009 NM_000022.3(ADA):c.466C>T (p.Arg156Cys) ADA Jan 01, 1992 MedGen:C1863236,OMIM:102700,Orphanet:ORPHA277 Severe combined immunodeficiency due to ADA deficiency germline;unknown 20 44625581 GTCAAGGCCCGGTCCATCCTGTGCTGCATGCGCCACCAGCCCAGTGAGTAGGATCACCGCC 886041989 264012 NM_014795.3(ZEB2):c.3046C>T (p.Arg1016Ter) ZEB2 Oct 31, 2017 MedGen:CN517202 not provided germline 2 144396433 AAGACATTCCAGAAAAGCAGTTCCCTTCTGCGACATAAATACGAACACACAGGTATGAGTG 759274321 389221 NM_000720.3(CACNA1D):c.1127C>T (p.Ala376Val) CACNA1D Jun 04, 2016 MedGen:C3554018,OMIM:614896,Orphanet:ORPHA324321 Sinoatrial node dysfunction and deafness germline 3 53673723 GATCTCCTTACATTTTACAGGTAAATGATGCGATAGGATGGGAATGGCCATGGGTGTATTT 121909363 23678 NM_000163.4(GHR):c.703C>T (p.Arg235Ter) GHR Aug 07, 2013 MedGen:C0271568,OMIM:262500,Orphanet:ORPHA633,SNOMED CT:38196001 Laron-type isolated somatotropin defect germline 5 42711291 GAATATGAAGTGCGTGTGAGATCCAAACAACGAAACTCTGGAAATTATGGCGAGTTCAGTG 397508701 68592 NM_000492.3(CFTR):c.4231C>T (p.Gln1411Ter) CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline 7 117665553 GAACACAGGATAGAAGCAATGCTGGAATGCCAACAATTTTTGGTGAGTCTTTATAACTTTA 869312831 226435 NM_014712.2(SETD1A):c.2209C>T (p.Gln737Ter) SETD1A Mar 14, 2016 Human Phenotype Ontology:HP:0100753,MedGen:C0036341,OMIM:181500,SNOMED CT:58214004 Schizophrenia germline 16 30966090 GGCTTGCCGTATGCTCTATATGCACAGGGGCAGGAGGGCAGAGGGGCATACTCACGGGAGG 387907299 45817 NM_032806.5(POMGNT2):c.1333C>T (p.Arg445Ter) POMGNT2 Sep 25, 2012 MedGen:C3553813,OMIM:614830 Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type a, 8 germline 3 43080099 CTCTGTTGCCGGAACCCCGAGTGGCTCTTCCGAATCTACCAGGACACCAAGGTGGACATCC 121434357 16983 NM_030957.3(ADAMTS10):c.709C>T (p.Arg237Ter) ADAMTS10 Nov 01, 2004 MedGen:C1869114,OMIM:277600 Weill-Marchesani syndrome 1 germline 19 8601029 GGCCAGCCAGGCCTGAAGCGATCGGTCAGCCGAGAGCGCTACGTGGAGACCCTGGTGGTGG 121918223 16263 NM_006363.5(SEC23B):c.1588C>T (p.Arg530Trp) SEC23B Aug 01, 2009 MedGen:C1306589,OMIM:224100,Orphanet:ORPHA98873,SNOMED CT:68870007 Congenital dyserythropoietic anemia, type II germline 20 18543095 GACCAGGAGGCTGCGGCAGTGTTGATGGCACGGCTTGGGGTGTTCCGAGCGGAGTCAGAGG 761848742 407566 NM_007171.3(POMT1):c.1858C>T (p.Arg620Ter) POMT1 Aug 04, 2015 MedGen:CN517202 not provided germline 9 131521439 TACGCCCTGCTGTCCTTGTGGTACCTGCTCCGACGGCGAAGAAATGTCCATGACCTCCCTC 369742878 177280 NM_002420.5(TRPM1):c.2998C>T (p.Arg1000Ter) TRPM1 Feb 18, 2014 MedGen:C2750747,OMIM:613216 Congenital stationary night blindness, type 1C germline 15 31031046 CCAGAGGAGAAGCCCTCTTGGAAACTGGCCCGAAACATCTTCTACATGCCCTACTGGATGA -1 214855 NM_016218.3(POLK):c.1324C>T (p.Leu442Phe) POLK Jun 10, 2014 Human Phenotype Ontology:HP:0012125,MedGen:C0376358,OMIM:176807,SNOMED CT:399068003 Malignant tumor of prostate somatic 5 75590408 TACAGCCTATGTCAAGAACTTTGCAGTGAGCTTGCTCAGGATCTACAGAAAGAAAGACTTA 762387914 357781 NM_000050.4(ASS1):c.814C>T (p.Arg272Cys) ASS1 Dec 17, 2016 MedGen:C0175683,OMIM:215700,Orphanet:ORPHA187 Citrullinemia type I germline;unknown 9 130480425 GGCGTGGGCCGTATTGACATCGTGGAGAACCGCTTCATTGGAATGAAGTCCCGAGGTGAGT 28939712 21126 NM_003640.4(ELP1):c.2741C>T (p.Pro914Leu) ELP1 May 01, 2003 MedGen:C0013364,OMIM:223900,Orphanet:ORPHA1764,SNOMED CT:29159009 Familial dysautonomia germline 9 108894062 AAAGTTCTCATTAATCATTTTTTTAGGATCCCAAAGAATATCTTCCATTTCTTAATACACT 267607066 16360 NM_001174089.1(SLC4A11):c.2213C>T (p.Thr738Met) SLC4A11 Jul 01, 2006 MedGen:C2750450,OMIM:613268 Corneal dystrophy, Fuchs endothelial, 4 germline 20 3228687 GCCACCGCAGGATTGTGAACGTGAAGGAGACGCGGCTGACCTCGCTGGGCGCCAGCGTCCT 121917873 15500 NM_000097.5(CPOX):c.982C>T (p.Arg328Cys) CPOX Jan 01, 2002 MedGen:C0342856,SNOMED CT:190915002 Coproporphyria germline 3 98585631 AGGTGTGATGATTACTTCTTTATAGCCCATCGTGGAGAACGGCGGGGCATTGGTGGTATCT 1057521066 365287 NM_006516.2(SLC2A1):c.844C>T (p.Gln282Ter) SLC2A1 Jan 19, 2017 MedGen:CN517202 not provided germline 1 42929616 ATCCTCATCGCTGTGGTGCTGCAGCTGTCCCAGCAGCTGTCTGGCATCAACGCTGTGAGTG 104894690 19270 NM_024301.4(FKRP):c.400C>T (p.Arg134Trp) FKRP Dec 01, 2003 MedGen:C1846672,OMIM:607155,Orphanet:ORPHA34515 Limb-girdle muscular dystrophy-dystroglycanopathy, type C5 germline 19 46755850 GAGTTTGTGGCCCTAGTACCTGATGGGGCGCGGGCTGAGGCACCTGGCCTGCTGGAGCGCA 104894178 22619 NM_006214.3(PHYH):c.823C>T (p.Arg275Trp) PHYH Mar 15, 2016 MedGen:C2749345;Human Phenotype Ontology:HP:0000547,MeSH:D012174,MedGen:C0035334,OMIM:268000,Orphanet:ORPHA791,SNOMED CT:28835009;MedGen:CN517202 Refsum disease, adult, 1;Retinitis pigmentosa;not provided germline;unknown 10 13283695 GGATCTGGTCAGAATAAAACCCAGGGATTCCGGAAGGTAAGCATTCACATTGCTGCACCTG 137852824 29080 NM_000439.4(PCSK1):c.920C>T (p.Ser307Leu) PCSK1 Sep 01, 2007 MedGen:C1833053,OMIM:600955,Orphanet:ORPHA71528 Proprotein convertase 1/3 deficiency germline 5 96410949 AGGGGAAGGGGTCCATCTTCGTCTGGGCTTCGGGAAACGGGGGGCGTCAGGGAGATAATTG 104894093 21663 NM_006412.3(AGPAT2):c.202C>T (p.Arg68Ter) AGPAT2 Dec 08, 2016 MedGen:C1720862,OMIM:608594 Congenital generalized lipodystrophy type 1 germline 9 136677537 CTCCCCTGCAGCATCATCGGCTGGTTCGTGCGAAGCTTCAAGTACTTTTACGGGCTCCGCT 398123776 100195 NM_003494.3(DYSF):c.2869C>T (p.Gln957Ter) DYSF Jun 19, 2013 MedGen:C1850889,OMIM:253601,Orphanet:ORPHA268;MedGen:C1850808,OMIM:254130,Orphanet:ORPHA45448 Limb-girdle muscular dystrophy, type 2B;Miyoshi muscular dystrophy 1 germline 2 71569878 CTGAGCTTCGTGGAAGAGGTGTTTGAGAACCAGACCCGGCTTCCCGGAGGCCAGTGGATCT 756762196 242512 NM_016373.3(WWOX):c.790C>T (p.Arg264Ter) WWOX Sep 28, 2016 MedGen:C3463992,OMIM:308350;MedGen:C3280452,OMIM:614322,Orphanet:ORPHA284282;MedGen:CN517202 Epileptic encephalopathy, early infantile, 1;Spinocerebellar ataxia, autosomal recessive 12;not provided germline 16 78425054 CGTGTCATTGTGGTCTCCTCAGAGTCCCATCGGTGGGTTTGAATTGCATATTTGTTCACTT 796051995 199946 NM_015506.2(MMACHC):c.217C>T (p.Arg73Ter) MMACHC Aug 11, 2015 MedGen:CN517202 not provided germline 1 45507491 CTCAAGCCCTTCTTGCAGAGCTGCCACCTCCGAATGCTGACTGACCCAGTGGACCAGTGTG 771203308 214264 NM_024790.6(CSPP1):c.2260C>T (p.Arg754Ter) CSPP1 Feb 23, 2015 MedGen:C3810212,OMIM:615636 Joubert syndrome 21 unknown 8 67158480 GAGGAAAAGAAACAAAGAGAGGAAGCAGAGCGAGAGAGACTGAGAATTGCAGAAGAAAAAG 397507662 66112 NM_000059.3(BRCA2):c.3283C>T (p.Gln1095Ter) BRCA2 Sep 08, 2016 MedGen:C2675520,OMIM:612555 Breast-ovarian cancer, familial 2 germline 13 32337638 CATATAACCCCTCAGATGTTATTTTCCAAGCAGGATTTTAATTCAAACCATAATTTAACAC 397514722 75088 NM_080605.3(B3GALT6):c.16C>T (p.Arg6Trp) B3GALT6 Jun 06, 2013 MedGen:C3809210,OMIM:615349 Ehlers-Danlos syndrome, progeroid type, 2 germline 1 1232294 CCCGGCGCGGGCGCCATGAAGCTGCTGCGGCGGGCGTGGCGGCGGCGGGCGGCGCTAGGCC 121918707 27606 NM_001252634.1(THRB):c.727C>T (p.Arg243Trp) THRB Sep 21, 2015 MedGen:C2937288,OMIM:188570 Thyroid hormone resistance, generalized, autosomal dominant germline 3 24143512 AACGCCCAAGGCAGCCACTGGAAGCAAAAACGGAAATTCCTGGTAAGGCTTCCTTGCACAG 121434636 24095 NM_001698.2(AUH):c.589C>T (p.Arg197Ter) AUH Apr 01, 2003 MedGen:C0342727,OMIM:250950,Orphanet:ORPHA67046,SNOMED CT:237950009 3-Methylglutaconic aciduria germline 9 91297993 GGTCTTGAACTGGCTTTAGCCTGTGATATACGAGTAGCAGGTAAGAATTAATCCTGTTAAA 113001196 51577 NM_000138.4(FBN1):c.6658C>T (p.Arg2220Ter) FBN1 Jul 29, 2016 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:CN517202 Marfan syndrome;not provided germline 15 48432947 TGTGCCCAGAATCCTCTGCTCTGTGCCTTCCGATGTGTGAACACTTATGGGTCATATGAAT 387906815 39165 NM_005257.5(GATA6):c.533C>T (p.Ala178Val) GATA6 Oct 01, 2010 MedGen:C3280939,OMIM:614474 Atrioventricular septal defect 5 germline 18 22171677 GCTTCGTGCACTCTGCGGCCGCGGCGGCAGCAGCCGCGGCGGCGGCCAGCTCCCCGGTCTA -1 443475 NM_000094.3(COL7A1):c.5932C>T (p.Arg1978Ter) COL7A1 Oct 30, 2017 MedGen:CN517202 not provided germline 3 48575673 GGTAGCTTCCTGCCTGTGCCCGAACGGCGTCGAGGCCCCAAGGGGGACTCAGGCGAACAGG 532190594 363710 NM_000019.3(ACAT1):c.622C>T (p.Arg208Ter) ACAT1 Jan 05, 2017 MedGen:CN517202 not provided germline 11 108140107 GAGAATACAGCAAAGAAGCTGAATATTGCACGAAATGAACAGGACGCTTATGCTATTAATT -1 442625 NM_002016.1(FLG):c.9595C>T (p.Gln3199Ter) FLG Jul 28, 2017 MedGen:CN517202 not provided germline 1 152305291 GCCGACATCTCTAGACACTCACAGGCAGTCCAGGGACAATCAGAGGGGTCCAGGAGAAGCA 121908420 20396 NM_014384.2(ACAD8):c.988C>T (p.Arg330Trp) ACAD8 Oct 27, 2017 MedGen:C1969809,OMIM:611283,Orphanet:ORPHA79159,SNOMED CT:445274004;MedGen:CN517202 Deficiency of isobutyryl-CoA dehydrogenase;not provided germline 11 134261786 GCTGATATGGCAACAAGGCTGGTGGCCGCGCGGCTGATGGTCCGCAATGCAGCAGTGGCTC 782092363 224814 NM_001135055.2(TKT):c.952C>T (p.Arg318Cys) TKT Jul 20, 2016 MedGen:C4310751,OMIM:617044 Short stature, developmental delay, and congenital heart defects germline 3 53230612 TTCCCACTCTCTTCCTCACAGATAGCCACCCGCAAGGCCTACGGGCAGGCACTGGCCAAGC 137852516 25050 NM_000216.3(ANOS1):c.784C>T (p.Arg262Ter) ANOS1 Jun 01, 2002 MedGen:C1563719,OMIM:308700 Kallmann syndrome 1 germline X 8585339 GACATAAGACCCAGCCGATGGTACCAGTTTCGAGTGGCTGCTGTGAATGTGCATGGAACTC 587777784 166195 NM_032374.4(APOPT1):c.235C>T (p.Arg79Ter) APOPT1 Sep 04, 2014 MedGen:C0268237,OMIM:220110,Orphanet:ORPHA254905,SNOMED CT:67434000 Hepatic failure, early-onset, and neurologic disorder due to cytochrome C oxidase deficiency germline 14 103571695 ATAGGACCCCCAGATAAATATTCAAACCTTCGACCTGTTCACTTTTACATACCTGAAAATG 606231453 171041 NM_001114748.1(TMEM240):c.346C>T (p.Arg116Cys) TMEM240 Oct 01, 2014 MedGen:C1843891,OMIM:607454,Orphanet:ORPHA98773 Spinocerebellar ataxia 21 germline 1 1535616 TGGATGGACGGCGTCCTGCACTGCGCCGTGCGCGCCTGGAGAGCCGGACGGCGCTACGGTG 1060503165 392477 NM_001927.3(DES):c.394C>T (p.Gln132Ter) DES Aug 01, 2016 MedGen:C1832370,OMIM:601419,Orphanet:ORPHA98909 Myofibrillar myopathy 1 germline 2 219418856 TACATCGAGAAGGTGCGCTTCCTGGAGCAGCAGAACGCGGCGCTCGCCGCCGAAGTGAACC 121908044 18786 NM_000527.4(LDLR):c.621C>T (p.Gly207=) LDLR Mar 30, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline;not applicable 19 11105527 CTCGGCCTTCGAGTTCCACTGCCTAAGTGGCGAGTGCATCCACTCCAGCTGGCGCTGTGAT 886037827 263172 NM_138704.3(NSMCE3):c.626C>T (p.Pro209Leu) NSMCE3 Dec 19, 2016 MedGen:CN239026;MedGen:C4310653,OMIM:617241 Lung damage, immunodeficiency and chromosome breakage syndrome;Lung disease, immunodeficiency, and chromosome breakage syndrome germline;inherited;not applicable;unknown 15 29269080 GGGACTTTCTGCGGCGCTTAGGGGTCTACCCCACCAAGAAGCATTTAATTTTCGGAGATCC 876657725 230574 NM_153700.2(STRC):c.3217C>T (p.Arg1073Ter) STRC Nov 12, 2015 MedGen:CN043648,Orphanet:ORPHA87884 Nonsyndromic hearing loss and deafness germline 15 43611237 AGCCCCCAGACACTCCAGGCCATCCCTAGGCGAGTCCTGGTCGGGGCTTGTTCCTGCCTGG 1057518683 361214 NM_152594.2(SPRED1):c.973C>T (p.Arg325Ter) SPRED1 Apr 10, 2015 MedGen:C1969623,OMIM:611431,Orphanet:ORPHA137605 Legius syndrome de novo 15 38351302 CCTTCCTCATTAAAAATTAAGAAGTCAAAACGAAGAAAAGAGGATGGTGAACGTTCTCGCT 387906805 39141 NM_005691.3(ABCC9):c.4640C>T (p.Thr1547Ile) ABCC9 Feb 01, 2007 MedGen:C3279695,OMIM:614050 Atrial fibrillation, familial, 12 germline 12 21805184 AGAATGGCCTCTTTTCCACTTTGGTGATGACCAACAAGTAGACCATCATGATCTATTGCAC 943680446 408035 NM_001080463.1(DYNC2H1):c.10219C>T (p.Arg3407Ter) DYNC2H1 Sep 07, 2017 MedGen:CN674505;MedGen:CN517202 Short-rib polydactyly syndrome type III;not provided germline;maternal 11 103253440 GTTAACTTTACTACAACAAGAAGTGGATTACGAGGGCAGGTATACATAGATAATAATAATT 121908652 21349 NM_030761.4(WNT4):c.247C>T (p.Arg83Trp) WNT4 Jan 01, 2007 MedGen:C2675014,OMIM:158330,Orphanet:ORPHA247768 Mullerian aplasia and hyperandrogenism germline 1 22129682 CTGGCCATTGAGGAGTGCCAGTACCAGTTCCGGAACCGGCGCTGGAACTGCTCCACACTCG 118192199 34644 NM_172107.3(KCNQ2):c.587C>T (p.Ala196Val) KCNQ2 Mar 31, 2016 MedGen:C1852587,OMIM:121200 Benign familial neonatal seizures 1 germline 20 63444762 GCTCCCAGGGCAACGTCTTTGCCACATCTGCGCTCCGGAGCCTGCGCTTCCTGCAGATTCT 886041219 264188 NM_022455.4(NSD1):c.5854C>T (p.Arg1952Trp) NSD1 Mar 15, 2016 MedGen:CN517202 not provided germline 5 177280796 CCAGAGGTTGAAATTTTCCGCACATTACAGCGGGGTTGGGGTCTACGGACAAAAACAGATA 794728517 197453 NM_000218.2(KCNQ1):c.961C>T (p.Gln321Ter) KCNQ1 Dec 12, 2012 MedGen:CN517202 not provided germline 11 2583474 ACCACCATCGGCTATGGGGACAAGGTGCCCCAGACGTGGGTCGGGAAGACCATCGCCTCCT 137852294 25577 NM_000292.2(PHKA2):c.556C>T (p.Arg186Cys) PHKA2 May 01, 1996 MedGen:C2748941 Glycogen storage disease IXa2 germline X 18945140 TTTCTCCCCCAGGATTATGGAATGTGGGAGCGTGGAGATAAGACTAATCAGGGCATCCCGG 750364303 400898 NM_001211.5(BUB1B):c.2308C>T (p.Arg770Ter) BUB1B Oct 17, 2016 MedGen:CN031748,OMIM:257300 Mosaic variegated aneuploidy syndrome 1 germline 15 40210133 TCAACAGGTAATGAGGATTACTGCATTAAACGAGAATACCTAATATGTGAAGATTACAAGT 587783558 169887 NM_178151.2(DCX):c.532C>T (p.Arg178Cys) DCX Feb 08, 2013 Human Phenotype Ontology:HP:0002282,MedGen:C0008519 Heterotopia germline X 111401163 GCACAGGCCAGGGAGAACAAGGACTTTGTGCGCCCCAAGCTGGTTACCATCATCCGCAGTG 749036865 222036 NM_000051.3(ATM):c.1369C>T (p.Arg457Ter) ATM Jul 17, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0027672,SNOMED CT:699346009 Ataxia-telangiectasia syndrome;Hereditary cancer-predisposing syndrome germline;unknown 11 108250834 CGACATGGGGAACGTACACCATATGTGTTACGATGCCTTACGGAAGTTGCATTGTGTCAAG 773464867 229908 NM_022124.5(CDH23):c.9556C>T (p.Arg3186Ter) CDH23 Jul 30, 2015 MedGen:C1832845,OMIM:601067 Usher syndrome, type 1D germline 10 71812813 GAGCCAGCAGCTGTCAAGCCTGATGATGACCGATACCTGCGGGCTGCCATCCAGGAGTATG 786200961 178418 NM_006766.4(KAT6A):c.3070C>T (p.Arg1024Ter) KAT6A Jan 24, 2018 MedGen:CN225587;MedGen:C4225396,OMIM:616268,Orphanet:ORPHA457193;MedGen:CN517202 KAT6A syndrome;Mental retardation, autosomal dominant 32;not provided de novo;germline 8 41937538 AAACCATTTCTCCACCGAAGGAGGAGAGTCCGAAAGCGCAAACACCACAATAGCAGTGTAG 118204051 15782 NM_001080522.2(CC2D2A):c.3364C>T (p.Pro1122Ser) CC2D2A Feb 23, 2015 MedGen:C2676788,OMIM:612285 Joubert syndrome 9 germline;unknown 4 15567752 TGCCATACGACTACGGCTGAAGGACCAAACCCTAGCTGGAATGAAGAACTAGAACTTCCAT 121908458 20876 NM_006790.2(MYOT):c.179C>T (p.Ser60Phe) MYOT Nov 11, 2016 MedGen:C1836607,OMIM:609200 Myotilinopathy germline 5 137870830 AAAGATTTTCTGCCTCCTCAACACTGAGCTCTCACATCACCATGTCCTCCTCTGCTTTCCC 199473282 38446 NM_198056.2(SCN5A):c.4859C>T (p.Thr1620Met) SCN5A Apr 28, 2017 MedGen:C1142166,Orphanet:ORPHA130,SNOMED CT:418818005;MedGen:CN029323,OMIM:601144;MedGen:CN029323,OMIM:601144 Brugada syndrome;Brugada syndrome 1;Brugada syndrome 1 germline 3 38551513 ACATCATCCAGAAGTACTTCTTCTCCCCGACGCTCTTCCGAGTCATCCGCCTGGCCCGAAT 886044894 273895 NM_201383.2(PLEC):c.7192C>T (p.Arg2398Ter) PLEC Aug 16, 2016 MedGen:C2931072,OMIM:226670,Orphanet:ORPHA257 Epidermolysa bullosa simplex and limb girdle muscular dystrophy germline 8 143922749 CGCCTCAAGCTGCGTGTGGCCGAGATGAGCCGAGCCCAGGCCCGCGCTGAGGAGGACGCCC 112901682 76366 NM_001613.2(ACTA2):c.115C>T (p.Arg39Cys) ACTA2 May 22, 2017 MedGen:C2673186,OMIM:611788;MedGen:CN118826,Orphanet:ORPHA91387;MedGen:CN517202 Aortic aneurysm, familial thoracic 6;Thoracic aortic aneurysm and aortic dissection;not provided germline 10 88948816 CCCAGGGCTGTTTTCCCATCCATTGTGGGACGTCCCAGACATCAGGTGAGGAAAATTATGA 886037950 248811 NM_024824.4(ZC3H14):c.460C>T (p.Arg154Ter) ZC3H14 Sep 20, 2016 MedGen:C4310703,OMIM:617125 Mental retardation, autosomal recessive 56 germline 14 88572606 AGACAGACTTACGATGATGGAGCTGCAACCCGACTAATGTCAACAGTGAAACCTTTGAGGG 780001540 234486 NM_005591.3(MRE11):c.1447C>T (p.Arg483Ter) MRE11 May 19, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 11 94459461 TTAGTGAAATACCAGTTGGAAAAAACACAGCGATTTCTTAAAGAACGTCATATTGATGCCC 281865422 29852 NC_000014.9:g.105855107C>T IGHM Oct 01, 2002 MedGen:C1832241,OMIM:601495,Orphanet:ORPHA33110 Agammaglobulinemia, non-Bruton type germline 14 105855107 GGTTTTCACAGCTTCGCCATTCTGGCGGGTCCAGGAGATGGTCACGCTGTCATAGGTGGTC 587782518 152233 NM_000038.5(APC):c.4216C>T (p.Gln1406Ter) APC Sep 21, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 5 112839810 TTTGAGAGTCGTTCGATTGCCAGCTCCGTTCAGAGTGAACCATGCAGTGGAATGGTAAGTG 57920071 29528 NM_005572.3(LMNA):c.1444C>T (p.Arg482Trp) LMNA Nov 14, 2014 MedGen:C1720860,OMIM:151660,Orphanet:ORPHA2348;MedGen:CN517202 Familial partial lipodystrophy 2;not provided germline 1 156136984 CAGAATGGAGATGATCCCTTGCTGACTTACCGGTTCCCACCAAAGTTCACCCTGAAGGCTG 144080386 361772 NM_016233.2(PADI3):c.881C>T (p.Ala294Val) PADI3 Jan 05, 2017 MedGen:C0432347,OMIM:191480,Orphanet:ORPHA1410,SNOMED CT:254230001 Uncombable hair syndrome germline 1 17270928 TCTTCACTGACACTGTGGTGTTCCGAGTGGCACCCTGGATCATGACGCCCAGCACTCTGCC 55729925 404974 NM_198053.2(CD247):c.301C>T (p.Gln101Ter) CD247 Jun 23, 2015 MedGen:CN517202 not provided germline 1 167435434 CCTCTAACGTCTTCCCGTTGTCTTTCCTAGCAGAGAAGGAAGAACCCTCAGGAAGGCCTGT -1 460301 NM_000264.4(PTCH1):c.2062C>T (p.Gln688Ter) PTCH1 Jun 05, 2017 MedGen:C0004779,OMIM:109400,Orphanet:ORPHA377,SNOMED CT:69408002 Gorlin syndrome germline 9 95468939 ACCGCTGAGCCGCGCTCCGAGATCTCTGTGCAGCCCGTCACCGTGACACAGGACACCCTCA 398123283 98606 NM_000266.3(NDP):c.109C>T (p.Arg37Ter) NDP Oct 28, 2016 MedGen:CN517202 not provided germline X 43958537 GACAGCTCATTCATAATGGACTCGGACCCTCGACGCTGCATGAGGCACCACTATGTGGATT 72555366 15978 NM_000404.3(GLB1):c.622C>T (p.Arg208Cys) GLB1 May 02, 2017 MedGen:C0085131,Orphanet:ORPHA354;MedGen:C0268272,OMIM:230600,Orphanet:ORPHA79256,SNOMED CT:18756002;MedGen:C0268273,OMIM:230650,Orphanet:ORPHA79257;MedGen:C0268271,OMIM:230500,Orphanet:ORPHA79255,SNOMED CT:238026007;MedGen:C0086652,OMIM:253010,Orphanet:ORPHA309310,SNOMED CT:238044004 GM1 gangliosidosis;GM1 gangliosidosis type 2;Gangliosidosis GM1 type 3;Infantile GM1 gangliosidosis;Mucopolysaccharidosis, MPS-IV-B germline 3 33058200 GACTACCTGCGCTTCCTGCAGAAGCGCTTTCGCCACCATCTGGGGGATGATGTGGTTCTGT 587777158 106641 NM_144628.3(TBC1D20):c.292C>T (p.Gln98Ter) TBC1D20 Dec 05, 2013 MedGen:C3810265,OMIM:615663 Warburg micro syndrome 4 germline 20 445095 AACCTACGGCAGATGAGCAAGGACTACCAACAAGTGTTGCTGGACGTCCGGCGGTCATTGC 80356999 69186 NM_007294.3(BRCA1):c.2275C>T (p.Gln759Ter) BRCA1 Sep 08, 2016 MedGen:C2676676,OMIM:604370 Breast-ovarian cancer, familial 1 germline 17 43093256 GATCTCATGTTAAGTGGAGAAAGGGTTTTGCAAACTGAAAGATCTGTAGAGAGTAGCAGTA 863224191 211325 NM_015713.4(RRM2B):c.520C>T (p.Arg174Ter) RRM2B May 19, 2014 MedGen:CN517202 not provided germline 8 102224076 TATGTTAAGAAAAAAGCAGATTGGGCCTTGCGATGGATAGCAGATAGAAAATCTACTTTTG -1 442180 NM_000435.2(NOTCH3):c.268C>T (p.Arg90Cys) NOTCH3 Apr 10, 2014 MedGen:CN517202 not provided germline 19 15192449 GACCCCTGTCACTCAGGCCCCTGTGCTGGCCGTGGTGTCTGCCAGAGTTCAGTGGTGGCTG 587781219 165774 NM_130838.1(UBE3A):c.2233C>T (p.Gln745Ter) UBE3A Feb 14, 2014 MedGen:C0162635,OMIM:105830,Orphanet:ORPHA72,SNOMED CT:76880004 Angelman syndrome germline 15 25354414 ATTTTCTTGAATTTGCAGAATCTAGATTTCCAAGCACTAGAAGAAACTACAGAATATGACG 137852708 23875 NM_000336.2(SCNN1B):c.1849C>T (p.Pro617Ser) SCNN1B Jun 01, 1998 MedGen:C0221043,OMIM:177200,Orphanet:ORPHA526,SNOMED CT:71275003 Pseudoprimary hyperaldosteronism germline 16 23380727 GAGCAGGCCCTGCCCATCCCAGGCACCCCGCCCCCCAACTATGACTCCCTGCGTCTGCAGC 151340633 26832 NM_000052.6(ATP7A):c.601C>T (p.Arg201Ter) ATP7A Feb 05, 2016 MedGen:C0022716,OMIM:309400,Orphanet:ORPHA565,SNOMED CT:59178007 Menkes kinky-hair syndrome germline X 77988722 GGAAAAATTGGGAAACTGCAAGGTGTTCAGCGAATTAAAGGTAATGTGTCTGGTGTTGATT 764139968 192276 NM_001127464.2(ZNF469):c.9184C>T (p.Arg3062Ter) ZNF469 Jun 08, 2015 MedGen:C0268344,OMIM:229200,Orphanet:ORPHA90354,SNOMED CT:31798004 Corneal fragility keratoglobus, blue sclerae AND joint hypermobility germline 16 88436738 GGCACGGCGAGCTCACAGGGGCCACAGAGCCGAAGGACAGAGGAGGCTGCAGGGGCAGGGA 137853013 20622 NM_001001486.1(ATP2C1):c.1402C>T (p.Arg468Ter) ATP2C1 Jan 01, 2000 MedGen:C0085106,OMIM:169600,Orphanet:ORPHA2841,SNOMED CT:79468000 Familial benign pemphigus germline 3 130969385 CAAAAGTGGATGGCTGTTAAGTGTGTACACCGAACACAGCAGGTATCCATCTGTTTAAAGA 387906705 38896 NM_003688.3(CASK):c.1639C>T (p.Gln547Ter) CASK Feb 08, 2013 MedGen:C2677903,OMIM:300749,Orphanet:ORPHA163937 Mental retardation and microcephaly with pontine and cerebellar hypoplasia germline X 41561588 CGAGAAATCAATGGCATCAGTGTGGCTAACCAAACAGTGGAACAACTGCAAAAAATGCTTG 397515627 79357 NM_005267.4(GJA8):c.566C>T (p.Pro189Leu) GJA8 Sep 01, 2007 MedGen:C1861828,OMIM:116200 Cataract 1 germline 1 147908521 CTCTGTACCGCTGCAGCCGGTGGCCCTGCCCCAATGTGGTGGACTGCTTCGTGTCCCGGCC -1 485715 NM_001252634.1(THRB):c.1348C>T (p.Leu450Phe) THRB Jun 29, 2011 MedGen:C2937288,OMIM:188570 Thyroid hormone resistance, generalized, autosomal dominant germline 3 24122922 CTGCACATGAAGGTGGAATGCCCCACAGAACTCTTCCCCCCTTTGTTCTTGGAAGTGTTCG 121434583 31125 NM_002860.3(ALDH18A1):c.2350C>T (p.His784Tyr) ALDH18A1 Oct 01, 2008 MedGen:C0268354,OMIM:219150,Orphanet:ORPHA2962,SNOMED CT:238826008,SNOMED CT:59252009 Cutis laxa-corneal clouding-oligophrenia syndrome germline 10 95606800 TTCTCAGAGCATGGAAGTTTAAAATATCTTCATGAGAACCTCCCTATTCCTCAGAGAAACA 587781287 150513 NM_058216.2(RAD51C):c.955C>T (p.Arg319Ter) RAD51C Jul 31, 2017 MedGen:C3150659,OMIM:613399;MedGen:C3150653,OMIM:613390;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 3;Fanconi anemia, complementation group O;Hereditary cancer-predisposing syndrome;not provided germline 17 58724090 GCTACAATACGGCTAATCTTTCATTGGGACCGAAAGCAAAGGTCAGTACAGAAACAAGTTA 201258800 444273 NM_015214.2(DDHD2):c.985C>T (p.Arg329Ter) DDHD2 Oct 04, 2017 MedGen:CN517202 not provided germline 8 38245878 ATTGTGGACACAGTTGCTTCTGAAATGAACCGAATATACACACTTTTTCTACAGAGGAACC 1057521922 374931 NM_002878.3(RAD51D):c.478C>T (p.Gln160Ter) RAD51D Aug 31, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline 17 35106990 CTTCAGGCTAAAACCCAGGATGAGGAGGAACAGGTAAGGGCAGGATGCTGGGTTCCATTGA 876657714 230767 NM_000267.3(NF1):c.5242C>T (p.Arg1748Ter) NF1 Aug 08, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Neurofibromatosis, type 1;not provided germline 17 31327535 TCTACTGCTGTCCAAGTAACTTCAGCAGAGCGAACAAAAGTCCTAGGGCAATCAGTCTTTC 111033538 17382 NM_032601.3(MCEE):c.139C>T (p.Arg47Ter) MCEE Jan 07, 2016 MedGen:C1855100,OMIM:251120,Orphanet:ORPHA308425 Methylmalonyl-CoA epimerase deficiency germline 2 71124445 CAAGTGACAGGTTCTGTGTGGAACCTGGGTCGACTCAACCATGTAGCCATAGCAGTGCCAG 775024756 361755 NM_004644.4(AP3B2):c.199C>T (p.Arg67Ter) AP3B2 Jan 10, 2017 MedGen:C4310637,OMIM:617276 Epileptic encephalopathy, early infantile, 48 germline 15 82689223 TACCTTGACCCCACCACCCAGATGATTGCCCGAGGAAAGAATGCTTCAGACCTGTTTCCCG 769721856 269390 NM_001130987.1(DYSF):c.4282C>T (p.Gln1428Ter) DYSF Dec 07, 2015 MedGen:C1850889,OMIM:253601,Orphanet:ORPHA268 Limb-girdle muscular dystrophy, type 2B germline 2 71612701 CCCATCACCGTCAAGGTCATCGATAACCGCCAGTTTGGCCGCCGGCCTGTGGTGGGCCAGT 80338799 34194 NM_002880.3(RAF1):c.1472C>T (p.Thr491Ile) RAF1 Apr 03, 2017 MeSH:D009634,MedGen:C0028326,Orphanet:ORPHA648,SNOMED CT:205824006;MedGen:C0175704,Orphanet:ORPHA500;MedGen:CN166718,Orphanet:ORPHA98733;MedGen:CN517202 Noonan syndrome;Noonan syndrome with multiple lentigines;Rasopathy;not provided germline;somatic 3 12585745 CAGTGAAAATTGGAGATTTTGGTTTGGCAACAGTAAAGTCACGCTGGAGTGGTTCTCAGCA 63750577 33197 NM_000021.3(PSEN1):c.509C>T (p.Ser170Phe) PSEN1 Dec 23, 2010 MedGen:C1843013,OMIM:607822;MedGen:CN517202 Alzheimer disease, type 3;not provided germline 14 73186881 AGGTCATCCATGCCTGGCTTATTATATCATCTCTATTGTTGCTGTTCTTTTTTTCATTCAT 796065344 200769 NM_019074.3(DLL4):c.1660C>T (p.Gln554Ter) DLL4 Aug 19, 2015 MedGen:C0265268,Orphanet:ORPHA974,SNOMED CT:34748004;MedGen:C4225271,OMIM:616589 Adams-Oliver syndrome;Adams-Oliver syndrome 6 maternal;unknown 15 40936647 CTGCTGGGCATGGTGGCAGTGGCTGTGCGGCAGCTGCGGCTTCGACGGCCGGACGACGGCA 587783901 168356 NM_133433.3(NIPBL):c.2389C>T (p.Arg797Ter) NIPBL Feb 08, 2013 MedGen:CN029798,OMIM:122470 Cornelia de Lange syndrome 1 germline 5 36985569 AAATCTGACTCACCTCGGTTAAAATCAGAACGAGCTGAAGCCTTAAAGCAGAGACCTGATG -1 437689 NM_001145112.1(PATL2):c.784C>T (p.Arg262Ter) PATL2 Oct 24, 2017 MedGen:CN562785,OMIM:617743 OOCYTE MATURATION DEFECT 4 germline 15 44669869 GAAATGTGCCTCTCTTCTCATGCAGTGGTCCGAATCGAGGGTTCCCTGGGCCAGGTAGCTG 398123409 99011 NM_000466.2(PEX1):c.2230C>T (p.Gln744Ter) PEX1 Sep 28, 2012 MedGen:CN517202 not provided germline 7 92502076 ATTCGAATTTTGTGTTTTTTTCTTTAGGAACAAAGATGTGAAATTCTGTGTAATGTAATAA 869320705 227426 NM_004586.2(RPS6KA3):c.913C>T (p.Arg305Ter) RPS6KA3 Nov 17, 2015 MedGen:C0265252,OMIM:303600,SNOMED CT:15182000 Coffin-Lowry syndrome de novo X 20177017 GCGCAGAGTCTTTTACGAATGCTTTTCAAGCGAAATCCTGCAAACAGATTAGGTAAAAATT 886041772 264758 NM_000548.4(TSC2):c.4183C>T (p.Gln1395Ter) TSC2 May 25, 2016 MedGen:CN517202 not provided germline 16 2084405 TCCAGCTCCTCTCCCGAGCTGCAGACTCTGCAGGACATCCTCGGGGACCCTGGGGACAAGG 876657701 228967 NM_000251.2(MSH2):c.1384C>T (p.Gln462Ter) MSH2 Feb 03, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Hereditary cancer-predisposing syndrome;Lynch syndrome germline 2 47445655 GAAATGATAGAAACAACTTTAGATATGGATCAGGTATGCAATATACTTTTTAATTTAAGCA -1 446299 NM_001958.3(EEF1A2):c.796C>T (p.Arg266Trp) EEF1A2 Oct 18, 2017 MedGen:CN517202 not provided germline 20 63490712 TCTGCAGGCATTGGCACGGTGCCCGTGGGCCGGGTGGAGACCGGCATCCTGCGGCCGGGCA 61753224 226047 NM_000287.3(PEX6):c.1715C>T (p.Thr572Ile) PEX6 Oct 01, 2015 MedGen:C4225267,OMIM:616617 Heimler syndrome 2 germline 6 42967537 GCAGCTGCCCTCCCCTCATGGTTGTGGCCACCACAAGCCGGGCCCAGGACCTGCCTGCTGA 794728411 197353 NM_000238.3(KCNH2):c.214C>T (p.Pro72Ser) KCNH2 Apr 12, 2014 MedGen:CN517202 not provided germline 7 150974804 CGACCCTGCACCTGCGACTTCCTGCACGGGCCGCGCACGCAGCGCCGCGCTGCCGCGCAGA 1064793911 405448 NM_001256850.1(TTN):c.74680C>T (p.Gln24894Ter) TTN Jul 28, 2015 MedGen:CN517202 not provided germline 2 178566529 GAAATCTGTAAAGCAGATGAAGAAGAATGGCAAATAGTTACTCCACAGACTGGCCTGAGAG 768950892 424367 NM_016030.5(TRAPPC12):c.1880C>T (p.Ala627Val) TRAPPC12 Sep 18, 2017 MedGen:CN474476,OMIM:617669;MedGen:CN417131 ENCEPHALOPATHY, PROGRESSIVE, EARLY-ONSET, WITH BRAIN ATROPHY AND SPASTICITY;Progressive childhood encephalopathy germline;maternal 2 3478848 CTAACTGCCACCGTTGCTTGTGTTACAGCGCGTTCCTTCACCTCGGGCAGAATAACTTTGC 137852641 24263 NM_000435.2(NOTCH3):c.994C>T (p.Arg332Cys) NOTCH3 Apr 30, 2014 MedGen:C1272305,OMIM:125310,SNOMED CT:390936003;MedGen:CN517202 Cerebral autosomal dominant arteriopathy with subcortical infarcts and leukoencephalopathy;not provided germline 19 15191466 GTGTGCTTCCATGGGGCCACCTGCCATGACCGCGTGGCTTCTTTCTACTGTGCCTGCCCCA 767405535 200662 NM_138413.3(HOGA1):c.346C>T (p.Gln116Ter) HOGA1 Nov 27, 2014 MedGen:C3150878,OMIM:613616,Orphanet:ORPHA93600 Primary hyperoxaluria, type III germline 10 97599094 CTCACCTCTCTCCTTCCTCTGGCAGCCACTCAAGCCACAGTGGAGATGACCGTCAGCATGG 398122981 97326 NM_024876.3(COQ8B):c.1027C>T (p.Arg343Trp) COQ8B Jun 07, 2016 MedGen:C3809965,OMIM:615573 Nephrotic syndrome, type 9 germline 19 40700318 GACCAGTGCCAGGGCCTAAGCCAGGACCTGCGGAACCAGGTATGCTGTCTGGTGGCACAGT 121918020 28723 NM_000478.5(ALPL):c.814C>T (p.Arg272Cys) ALPL Sep 01, 2008 MedGen:C0220743,OMIM:241510,SNOMED CT:30174008;Human Phenotype Ontology:HP:0003239,MedGen:C0268412,OMIM:241500,Orphanet:ORPHA247651,SNOMED CT:55236002 Childhood hypophosphatasia;Infantile hypophosphatasia germline 1 21570326 TCCTCCTAGCACTCCCACTTCATCTGGAACCGCACGGAACTCCTGACCCTTGACCCCCACA 146816935 95048 NM_000179.2(MSH6):c.892C>T (p.Arg298Ter) MSH6 Sep 14, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0009405,Orphanet:ORPHA443090;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Hereditary nonpolyposis colon cancer;Lynch syndrome;not provided germline;unknown 2 47798875 GAAGGCCTGAACAGCCCTGTCAAAGTTGCTCGAAAGCGGAAGAGAATGGTGACTGGAAATG 387907118 40092 NM_174917.4(ACSF3):c.1567C>T (p.Arg523Ter) ACSF3 Aug 14, 2011 MedGen:C3280314,OMIM:614265,Orphanet:ORPHA289504 Combined malonic and methylmalonic aciduria germline 16 89146003 GGCCAGCGGGTCACTGCTGTGGTGACCCTCCGAGAAGGACACTCACTGTCCCACAGGGAGC 116840751 46873 NM_000168.5(GLI3):c.2149C>T (p.Gln717Ter) GLI3 Sep 13, 2012 MedGen:C0265220,OMIM:146510,Orphanet:ORPHA672,SNOMED CT:56677004 Pallister-Hall syndrome not provided 7 41967878 CCTGGTGGTCAGTCTTCATGCAGCAGCCAACAGTCCCCCATCAGCAACTATTCCAACAGTG 202001274 361822 NM_001128608.1(MAPKBP1):c.1318C>T (p.Arg440Ter) MAPKBP1 Jan 25, 2018 MedGen:CN781300,OMIM:617271 Nephronophthisis 20 germline 15 41815388 AGCTCCGGGGTGCATGGCTCCACCCTCCACCGAAACATCCTCAGCAGTGTGAGCCCTGAGG 121908880 21493 NM_000369.2(TSHR):c.1915C>T (p.Pro639Ser) TSHR Apr 01, 1999 MedGen:C1836706,OMIM:609152,Orphanet:ORPHA424 Hyperthyroidism, nonautoimmune germline 14 81143973 TTGATCTTCACCGACTTCATATGCATGGCCCCAATCTCATTCTATGCTCTGTCAGCAATTC 312262900 49417 NM_000095.2(COMP):c.1754C>T (p.Thr585Met) COMP Jul 25, 2013 MedGen:C1838280,OMIM:132400,Orphanet:ORPHA93308;MedGen:C0410538,OMIM:177170,Orphanet:ORPHA750,SNOMED CT:22567005 Multiple epiphyseal dysplasia 1;Pseudoachondroplastic spondyloepiphyseal dysplasia syndrome not provided 19 18785056 CTGCCTTCAATGGCGTGGACTTCGAGGGCACGTTCCATGTGAACACGGTCACGGATGACGA 1114167692 419438 NM_000179.2(MSH6):c.478C>T (p.Gln160Ter) MSH6 Mar 31, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 2 47795914 TTCTTTCTAGGTTCAAAATCAAAGGAAGCCCAGAAGGGAGGTCATTTTTACAGTGCAAAGC 387907146 40186 NM_024589.2(ROGDI):c.469C>T (p.Arg157Ter) ROGDI Apr 06, 2012 MedGen:C0406740,OMIM:226750,SNOMED CT:109478007 Kohlschutter's syndrome germline 16 4798631 GACGCAGTGATGCTGCAGCTGACCAGAGCCCGAAACCGGCTCACCACCCCCGCCACCCTCA 63749794 426884 NM_001171.5(ABCC6):c.3340C>T (p.Arg1114Cys) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16163159 CTGTATGTGGTTAGCTCATGCCAGCTGAGACGCTTGGAGTCAGCCAGCTACTCGTCTGTCT 104894090 24036 NM_000349.2(STAR):c.562C>T (p.Arg188Cys) STAR Dec 01, 2006 MedGen:C0342474,OMIM:201710,Orphanet:ORPHA90790,SNOMED CT:44231009 Cholesterol monooxygenase (side-chain cleaving) deficiency germline 8 38146051 CTGGTGGGGCCCCGTGACTTTGTGAGCGTGCGCTGTGCCAAGCGCCGAGGCTCCACCTGTG 121434432 21899 NM_001287.5(CLCN7):c.1663C>T (p.Gln555Ter) CLCN7 Jan 26, 2001 MedGen:C1969106,OMIM:611490 Osteopetrosis autosomal recessive 4 germline 16 1449282 GGCAAATACGCCCTGATGGGAGCTGCTGCCCAGCTGGGTATGTCCCAGCTCTTGCCCGATG 80359134 67344 NM_000059.3(BRCA2):c.8773C>T (p.Gln2925Ter) BRCA2 Sep 01, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 2;Hereditary cancer-predisposing syndrome germline 13 32379335 AAATGGTCACAGGGTTATTTCAGTGAAGAGCAGTTAAGAGCCTTGAATAATCACAGGCAAA 876658163 234266 NM_000051.3(ATM):c.6397C>T (p.Gln2133Ter) ATM May 19, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0027672,SNOMED CT:699346009 Ataxia-telangiectasia syndrome;Hereditary cancer-predisposing syndrome germline 11 108320003 AGTTACCATGAATCATTGTACAATGCTCTACAATCTCTAAGAGACAGAGAATTCTCTACAT 28935469 26794 NM_001110556.1(FLNA):c.620C>T (p.Pro207Leu) FLNA Oct 21, 2015 Human Phenotype Ontology:HP:0000175,MedGen:C2240378;Human Phenotype Ontology:HP:0000405,MedGen:C0018777;MedGen:C0265251,OMIM:311300,Orphanet:ORPHA90650,SNOMED CT:54036001;Human Phenotype Ontology:HP:0004322,MedGen:C0349588 Cleft palate;Conductive hearing impairment;Oto-palato-digital syndrome, type I;Short stature germline;unknown X 154367844 CCCTGGGCGCCCTGGTGGACAGCTGTGCCCCGGGTGAGGGGGCGCAGAGGCAGGAGAGACT 869025520 224271 NM_198056.2(SCN5A):c.3352C>T (p.Gln1118Ter) SCN5A Feb 08, 2017 MedGen:C1142166,Orphanet:ORPHA130,SNOMED CT:418818005;MedGen:CN517202 Brugada syndrome;not provided germline 3 38579372 GCCAGTGCATCTCAGGCCGACTGGCGGCAGCAGTGGAAAGCGGAACCCCAGGCCCCAGGGT 780225183 264538 NM_025114.3(CEP290):c.1936C>T (p.Gln646Ter) CEP290 Jun 05, 2017 MedGen:CN517202 not provided germline 12 88114536 ACAGTAAAAGAATTAGTTGAAGAAAATAAGCAACTTGAAGAAGGTATGAAAGAAATATTGC 121913650 29157 NM_000257.3(MYH7):c.5134C>T (p.Arg1712Trp) MYH7 Jul 26, 2017 MedGen:C3495498,OMIM:192600;Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Familial hypertrophic cardiomyopathy 1;Hypertrophic cardiomyopathy;Primary familial hypertrophic cardiomyopathy;not provided germline 14 23415652 GCGGAGCAGGAGCTGATTGAGACTAGTGAGCGGGTGCAGCTGCTGCATTCCCAGGTGAGCA 796053130 201362 NM_021007.2(SCN2A):c.3947C>T (p.Ala1316Val) SCN2A Nov 16, 2016 Human Phenotype Ontology:HP:0200134,MedGen:C0543888;MedGen:CN517202 Epileptic encephalopathy;not provided de novo;germline 2 165373322 GAACACTAAGAGCTCTGAGGCCACTGAGAGCTTTGTCCCGGTTTGAAGGAATGAGGGTAAG 80359099 67268 NM_000059.3(BRCA2):c.8485C>T (p.Gln2829Ter) BRCA2 Oct 02, 2015 MedGen:C2675520,OMIM:612555 Breast-ovarian cancer, familial 2 germline 13 32370555 GATGTAATTATTCAAAGAGCATACCCTATACAGGTATGATGTATTCTTGAAACTTACCATA 794727120 191521 NM_001142800.1(EYS):c.2194C>T (p.Gln732Ter) EYS Jan 20, 2015 MedGen:C1864446,OMIM:602772 Retinitis pigmentosa 25 germline 6 64997647 AATCCAGGCTATGTTGGGATAAGATGTGAACAGGACATTGATGACTGCATCCTGAATGCCT 863225232 214278 NM_153704.5(TMEM67):c.1073C>T (p.Pro358Leu) TMEM67 Feb 23, 2015 MedGen:C1853153,OMIM:610688 Joubert syndrome 6 unknown 8 93782402 TCTGTTGTATTATTTTGCTGCAGCTTTGTCCAGACACAGAGACAAGGCTAAATGCTGCTTA 587782993 166184 NM_005859.4(PURA):c.556C>T (p.Gln186Ter) PURA Jan 05, 2015 Human Phenotype Ontology:HP:0000750,MedGen:C0454644;Human Phenotype Ontology:HP:0001263,MedGen:C4020875;Human Phenotype Ontology:HP:0001249,MedGen:C1843367;MedGen:C4015357,OMIM:616158;Human Phenotype Ontology:HP:0001319,MedGen:C2267233;Human Phenotype Ontology:HP:0001250,MedGen:C0036572 Delayed speech and language development;Global developmental delay;Intellectual disability;Mental retardation, autosomal dominant 31;Neonatal hypotonia;Seizures germline 5 140114737 CGGGGGCCTGGCCTGGGCTCCACGCAGGGCCAGACCATTGCGCTGCCCGCGCAGGGGCTCA 193922145 44572 NM_000088.3(COL1A1):c.2161C>T (p.Gln721Ter) COL1A1 Oct 20, 2015 MeSH:D010013,MedGen:C0029434,Orphanet:ORPHA666,SNOMED CT:78314001;MedGen:C0023931,OMIM:166200,SNOMED CT:385482004 Osteogenesis imperfecta;Osteogenesis imperfecta type I germline 17 50191457 GATGCTGGTGCCCCTGGAGCTCCCGGTAGCCAGGGCGCCCCTGGCCTTCAGGGAATGCCTG 104893903 24045 NM_004387.3(NKX2-5):c.592C>T (p.Gln198Ter) NKX2-5 May 01, 1999 MedGen:C1862388,OMIM:108900 Atrial septal defect 7 with or without atrioventricular conduction defects germline 5 173232952 AACCGGCGCTACAAGTGCAAGCGGCAGCGGCAGGACCAGACTCTGGAGCTGGTGGGGCTGC 200818962 237408 NM_006929.4(SKIV2L):c.1120C>T (p.Arg374Ter) SKIV2L Apr 28, 2016 MedGen:CN517202 not provided germline 6 31962494 GCCCTGAGCAACCAGAAGTTCCGGGACTTCCGAAACACATTCGGGGATGTGGGGCTGCTCA 62625014 31971 NM_000087.3(CNGA1):c.959C>T (p.Ser320Phe) CNGA1 Sep 17, 2013 MedGen:C3151059,OMIM:613756;MedGen:C3151059,OMIM:613756 Retinitis pigmentosa 49;Retinitis pigmentosa 49 germline 4 47937535 TTATCCACTGGAATGCATGTGTGTTCTACTCTATTTCTAAAGCTATTGGATTTGGAAATGA 758683062 210228 NM_000020.2(ACVRL1):c.430C>T (p.Arg144Ter) ACVRL1 Jun 13, 2017 MedGen:C1838163,OMIM:600376;MedGen:C0152171,OMIM:178600,SNOMED CT:26174007 Hereditary hemorrhagic telangiectasia type 2;Primary pulmonary hypertension germline 12 51913675 GCCCTGGGTGTCCTGGGCCTGTGGCATGTCCGACGGAGGCAGGAGAAGCAGCGTGGCCTGC 754122018 233127 NM_000038.5(APC):c.5038C>T (p.Gln1680Ter) APC Aug 02, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline 5 112840632 GCTGCTGGAGAAGGAGTTAGAGGAGGGGCACAGTCAGGTGAATTTGAAAAACGAGATACCA 137853305 27502 NM_003289.3(TPM2):c.397C>T (p.Arg133Trp) TPM2 Mar 06, 2007 MedGen:C1834523,OMIM:601680,Orphanet:ORPHA1147;MedGen:CN517202 Distal arthrogryposis type 2B;not provided de novo;germline 9 35685529 CCTTTCAGAGGAATGAAGGTCATCGAAAACCGGGCCATGAAGGATGAGGAGAAGATGGAAC 786205697 188214 NM_016343.3(CENPF):c.8692C>T (p.Arg2898Ter) CENPF Mar 01, 2015 MedGen:C1855705,OMIM:243605,OMIM:616369 Stromme syndrome germline 1 214657139 CTGTGTTCACAGCAATCTAAACAAGATTCCCGAGGGTCTCCTTTGCTAGGTCCAGTTGTTC 267607118 16425 NM_153704.5(TMEM67):c.130C>T (p.Gln44Ter) TMEM67 Oct 01, 2009 MedGen:C1853153,OMIM:610688 Joubert syndrome 6 germline 8 93755044 TTACAGGCCCAGACCTTCTCTTTCCCTTTCCAGCAGCCGGAGAAGTGCGACAACAACCAGT 587777175 106771 NM_001007565.2(TFG):c.316C>T (p.Arg106Cys) TFG Feb 27, 2014 MedGen:C3714897,OMIM:615658,Orphanet:ORPHA431329 Spastic paraplegia 57, autosomal recessive germline 3 100728759 CCCCTTGAATCAAGTCAGGTGAAATATCTCCGTCGAGAACTGATAGAACTTCGAAATAAAG -1 477506 NM_024675.3(PALB2):c.2218C>T (p.Gln740Ter) PALB2 Mar 23, 2017 MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009 Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome germline 16 23629936 ATCTTAGGTACTACTCCAGCCTTTGGCCCTCAAGGCTCCTATGAAAAAGCATCTACAGAAG 782190413 211361 NM_003172.3(SURF1):c.574C>T (p.Arg192Trp) SURF1 Jan 06, 2016 MedGen:C4225246,OMIM:616684,Orphanet:ORPHA391351;MedGen:CN517202 Charcot-Marie-Tooth disease, type 4k;not provided germline 9 133352708 GTTCCCAGGAAGAAAGTGAATCCTGAAACCCGGCAGAAAGGCCAGGTAAGGGACATGGACT 758180890 259744 NM_003494.3(DYSF):c.1129C>T (p.Arg377Ter) DYSF Mar 29, 2016 na;MedGen:C1850808,OMIM:254130,Orphanet:ORPHA45448;MedGen:CN517202 DYSF- Related Disorder;Miyoshi muscular dystrophy 1;not provided germline;paternal 2 71526295 AACCTGCTCCGGCCCACAGGCGTAGCCCTGCGAGGAGCCCACTTCTGCCTGAAGGTCTTCC 61750152 105192 NM_000350.2(ABCA4):c.4577C>T (p.Thr1526Met) ABCA4 Apr 01, 2017 MedGen:C1866422,OMIM:601718;MeSH:C535804,MedGen:C1855465,OMIM:248200;MedGen:CN517202 Retinitis pigmentosa 19;Stargardt disease 1;not provided germline;unknown 1 94025011 AGCGCAGCACGGAAATTCTACAAGACCTGACGGACAGGAACATCTCCGACTTCTTGGTAAA 199476095 23237 NM_001009944.2(PKD1):c.12682C>T (p.Arg4228Ter) PKD1 Jan 01, 1996 MedGen:C0085413,OMIM:173900,SNOMED CT:28728008 Polycystic kidney disease, adult type germline 16 2089957 GTGTTCGAGGCCCTGCTCACCCAGTTTGACCGACTCAACCAGGCCACAGAGGACGTCTACC 121909011 22178 NM_000492.3(CFTR):c.1000C>T (p.Arg334Trp) CFTR Sep 08, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008;MedGen:CN517202;MedGen:CN169374 Cystic fibrosis;not provided;not specified germline;inherited;unknown 7 117540230 CCCTATGCACTAATCAAAGGAATCATCCTCCGGAAAATATTCACCACCATCTCATTCTGCA 578185749 259363 NM_001242896.1(DEPDC5):c.2620C>T (p.Arg874Ter) DEPDC5 Apr 13, 2016 Gene:50987,MedGen:C1858477,OMIM:604364 Epilepsy, familial focal, with variable foci 1 germline 22 31843199 ACGCTGAAGGATAAGATGATCACAGTGACGCGATACCTTCCCAAGTGAGTATTTGGATATT 121965010 15279 NM_000398.6(CYB5R3):c.655C>T (p.Arg219Ter) CYB5R3 May 01, 2008 MedGen:C2749560 Methemoglobinemia type 2 germline 22 42623867 CCCCTGCAGACCGAGAAGGACATCCTGCTGCGACCTGAGCTGGAGGAACTCAGGAACAAAC 267607982 419388 NM_000251.2(MSH2):c.1933C>T (p.Gln645Ter) MSH2 Oct 02, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline 2 47475198 AAAGCATCCAGGCATGCTTGTGTTGAAGTTCAAGATGAAATTGCATTTATTCCTAATGACG 587777219 125784 NM_172107.3(KCNQ2):c.794C>T (p.Ala265Val) KCNQ2 Jun 27, 2017 MedGen:C3150986,OMIM:613720,Orphanet:ORPHA439218;MedGen:CN169299;MedGen:CN517202 Early infantile epileptic encephalopathy 7;KCNQ2-Related Disorders;not provided de novo;germline 20 63442428 AGGGGGAGAACGACCACTTTGACACCTACGCGGATGCACTCTGGTGGGGCCTGGTGAGTTG 121913005 31873 NM_001927.3(DES):c.1325C>T (p.Thr442Ile) DES Dec 17, 2015 MedGen:C1832370,OMIM:601419,Orphanet:ORPHA98909;MedGen:CN517202 Myofibrillar myopathy 1;not provided germline 2 219425699 GCCCTGAGCAAAGGGGTTCTGAGGTCCATACCAAGAAGACGGTGATGATCAAGACCATCGA 1057520858 379449 NM_001111125.2(IQSEC2):c.2776C>T (p.Arg926Ter) IQSEC2 Dec 21, 2016 Gene:170530,MedGen:C2931498,OMIM:300551,OMIM:309530;MedGen:CN517202 Mental retardation, X-linked 1;not provided germline X 53243445 CCAGGGGTTGACAATGGTGAAGACATCCCCCGAGACCTCCTGGTGGGCATCTACCAGCGCA 1131690940 420711 NM_000455.4(STK11):c.658C>T (p.Gln220Ter) STK11 Jul 25, 2017 MedGen:C0027672,SNOMED CT:699346009;MeSH:D010580,MedGen:C0031269,OMIM:175200,Orphanet:ORPHA2869,SNOMED CT:54411001 Hereditary cancer-predisposing syndrome;Peutz-Jeghers syndrome germline 19 1220641 TGCCGGACCAGCCAGGGCTCCCCGGCTTTCCAGCCGCCCGAGATTGCCAACGGCCTGGACA 397507224 46114 NM_007294.3(BRCA1):c.3991C>T (p.Gln1331Ter) BRCA1 Sep 08, 2016 MedGen:C2676676,OMIM:604370 Breast-ovarian cancer, familial 1 germline 17 43091540 TCCAAACAAATGAGGCATCAGTCTGAAAGCCAGGGAGTTGGTCTGAGTGACAAGGAATTGG 386134212 36738 NM_003060.3(SLC22A5):c.865C>T (p.Arg289Ter) SLC22A5 May 31, 2017 MedGen:C0342788,OMIM:212140,Orphanet:ORPHA158,SNOMED CT:21764004 Renal carnitine transport defect germline 5 132387065 GAGTCCCCCCGATGGCTCATCTCTCAGGGACGATTTGAAGAGGCAGAGGTGATCATCCGCA 886041405 264689 NM_003482.3(KMT2D):c.5707C>T (p.Arg1903Ter) KMT2D Jul 07, 2016 MedGen:CN517202 not provided germline 12 49042816 CAGCTCTTCAAGGATGTTCTGGGCTCTGAACGAGAACAGCATCTGGGTTGTGGAACCCCTG 397514460 38923 NM_001173479.1(ARHGEF9):c.4C>T (p.Gln2Ter) ARHGEF9 Aug 01, 2011 MedGen:C1845102,OMIM:300607,Orphanet:ORPHA163985 Early infantile epileptic encephalopathy 8 germline X 63785142 TCAGAGAAGCCGGACTTCGCAAGCACCATGCAGTGGATAAGGGGCGGATCGGGAATGGTGA 587777741 166018 NM_018685.4(ANLN):c.1291C>T (p.Arg431Cys) ANLN Sep 01, 2014 MedGen:C4014993,OMIM:616032 Focal segmental glomerulosclerosis 8 germline 7 36411062 GTAAAATACAGCTTTTGATGGGTTTAGGAACGTCAAAAAGAACTAGCATGTCTTCGTGGCC 121918383 32922 NM_000384.2(APOB):c.3997C>T (p.Arg1333Ter) APOB Sep 12, 1988 MedGen:C1862596,Orphanet:ORPHA426,SNOMED CT:60193003 Familial hypobetalipoproteinemia germline 2 21013379 TTCAAGTCTGTGGGATTCCATCTGCCATCTCGAGAGTTCCAAGTCCCTACTTTTACCATTC 781028867 204571 NM_001080432.2(FTO):c.956C>T (p.Ser319Phe) FTO Sep 16, 2015 MedGen:C2752001,OMIM:612938 Growth retardation, developmental delay, coarse facies, and early death germline 16 53873846 TTTTGGCCGGTTCACAACCTCGGTTTAGTTCCACCCACCGAGTGGCAGAGGTAAGTGTAAA 786204864 187361 NM_000314.6(PTEN):c.511C>T (p.Gln171Ter) PTEN Oct 13, 2017 MedGen:C0265326,OMIM:153480,Orphanet:ORPHA109;MedGen:C0027672,SNOMED CT:699346009;MedGen:C1959582,OMIM:601728,Orphanet:ORPHA306498;MedGen:CN517202 Bannayan-Riley-Ruvalcaba syndrome;Hereditary cancer-predisposing syndrome;PTEN hamartoma tumor syndrome;not provided germline 10 87952136 TCTGTCCACCAGGGAGTAACTATTCCCAGTCAGAGGCGCTATGTGTATTATTATAGCTACC 796052985 201544 NM_001165963.1(SCN1A):c.2782C>T (p.Gln928Ter) SCN1A Apr 09, 2014 MedGen:CN517202 not provided germline 2 166037940 GATTGTGTCTGCAAGATCGCCAGTGATTGTCAACTCCCACGCTGGCACATGAATGACTTCT 878853970 238618 NM_000384.2(APOB):c.1672C>T (p.Arg558Ter) APOB Jan 11, 2016 MedGen:CN182502,OMIM:615558 Hypobetalipoproteinemia, familial, 1 germline 2 21028484 TTCCTTGATGATGCTTCTCCGGGAGATAAGCGACTGGCTGCCTATCTTATGTTGATGAGGA 72664295 427034 NM_001171.5(ABCC6):c.1176+6C>T ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16201995 CATCACTGGCCTGGTGTACAGAAAGGTGAGCCCTGGGGGACAAGGGCAGGTCTTCCCAGCC 267606971 18268 NM_013382.5(POMT2):c.551C>T (p.Thr184Met) POMT2 Nov 30, 2007 MedGen:C3150418,OMIM:613158,Orphanet:ORPHA206559 Limb-girdle muscular dystrophy-dystroglycanopathy, type C2 germline 14 77302940 TTTCACCAGCGAGCTCATGTTTTTCAGACACGGGATGCCTCACTCTGTCCCAGTACATCCT 368088025 361383 NM_000329.2(RPE65):c.130C>T (p.Arg44Ter) RPE65 May 07, 2017 MedGen:C1859844,OMIM:204100;MedGen:C3151086,OMIM:613794;MedGen:CN517202 Leber congenital amaurosis 2;Retinitis pigmentosa 20;not provided germline 1 68446825 ATCCCCCTCTGGCTCACCGGCAGTCTCCTTCGATGTGGGCCAGGACTCTTTGAAGTTGGAT 45451497 58419 NM_000548.4(TSC2):c.3412C>T (p.Arg1138Ter) TSC2 Mar 09, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1860707,OMIM:613254;MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Tuberous sclerosis 2;Tuberous sclerosis syndrome;not provided germline 16 2080179 CTGCCCTCTTCTTCAGGGGGCCATGGTCTTCGAGTTGGCGCCCTGGACGTGCCGGCCTCCC 121908065 19195 NM_000173.6(GP1BA):c.515C>T (p.Ala172Val) GP1BA Mar 01, 2001 MedGen:C3278148;MedGen:C2750610,OMIM:153670 Bernard-Soulier syndrome, type A1;Bernard-Soulier syndrome, type A2, autosomal dominant germline 17 4933119 CCACACCCAAGCTGGAGAAGCTCAGTCTGGCTAACAACAACTTGACTGAGCTCCCCGCTGG 587778618 138806 NM_000535.6(PMS2):c.1687C>T (p.Arg563Ter) PMS2 Jul 06, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0009405,Orphanet:ORPHA443090;MedGen:CN517202;MedGen:CN169374 Hereditary cancer-predisposing syndrome;Hereditary nonpolyposis colon cancer;not provided;not specified germline 7 5987078 TCAAACCAGGAAGATACCGGATGTAAATTTCGAGTTTTGCCTCAGCCAACTAATCTCGCAA 267607217 17798 NM_014319.4(LEMD3):c.1963C>T (p.Arg655Ter) LEMD3 Jun 01, 2009 MedGen:C3149399;MedGen:C3149695 Dermatofibrosis lenticularis disseminata, isolated;Osteopoikilosis with melorheostosis germline 12 65239970 GTTTGTGTCGTTCTGCGTTACATGAAATATCGATGGACAAAAGAAGAGGAGGAAACAAGGC 864321674 214794 NM_015100.3(POGZ):c.2935C>T (p.Arg979Ter) POGZ Jan 06, 2016 MedGen:C4225351,OMIM:616364,Orphanet:ORPHA468678 White-sutton syndrome de novo;germline 1 151406100 AAAAAGGAGCAGCTGTCTGTGAAGAAGCTTCGAGTAGTACTGTTTGCTCTATGCTGCAATA -1 443737 NM_021911.2(GABRB2):c.899C>T (p.Pro300Leu) GABRB2 Sep 05, 2017 MedGen:CN517202 not provided germline 5 161331061 CCCACCTCCGGGAAACTCTCCCTAAAATCCCCTATGTGAAGGCCATTGACATGTACCTGAT 121909547 33043 NM_000488.3(SERPINC1):c.235C>T (p.Arg79Cys) SERPINC1 Jan 01, 1996 MedGen:C0272375,OMIM:613118,Orphanet:ORPHA82,SNOMED CT:36351005 Antithrombin III deficiency germline 1 173914726 GAACAGAAGATCCCGGAGGCCACCAACCGGCGTGTCTGGGAACTGTCCAAGGCCAATTCCC 587777646 153756 NM_001080510.4(METTL23):c.397C>T (p.Gln133Ter) METTL23 Nov 22, 2016 MedGen:C4014745,OMIM:615942 Mental retardation, autosomal recessive 44 germline 17 76733367 AATCCCAAGGTCCAATTGTGGTCTACTTATCAAGTTAGGAGGCAAGTATGGATGACCCTTA 1114167509 419791 NM_130799.2(MEN1):c.1348C>T (p.Gln450Ter) MEN1 Dec 24, 2014 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 11 64805036 CTTGTGCAGTCCCTAGGCCGTTTTGAGGGACAGGTGAGGGACAGCTGCACAGAGGTCTGGG -1 473723 NM_004656.3(BAP1):c.1153C>T (p.Arg385Ter) BAP1 Dec 01, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 3 52404550 GAAGACCTGGCGGCAGGTGTGGGCCGCAGCCGAGTTCCAGTCCGCCCACCCCAGCAGTACT 147088100 190168 NM_001003811.1(TEX11):c.450C>T (p.Ala150=) TEX11 May 28, 2015 Gene:100820759,MedGen:C1839841,OMIM:309120 Spermatogenic failure, X-linked, 2 germline X 70853248 CGCTGATGAATGTTTTCAAGCTGCTGTGGCCGTAAGTTACCATTGACTTTTAGCTGAGGCA -1 427794 NM_006015.5(ARID1A):c.5164C>T (p.Arg1722Ter) ARID1A Dec 30, 2015 MedGen:C3553247,OMIM:614607 Mental retardation, autosomal dominant 14 germline 1 26779062 TTGCTAGAGCTCCTTGTAGAATATTTCCGACGATGCCTGATTGAGATCTTTGGCATTTTAA -1 440165 NM_001080463.1(DYNC2H1):c.7112C>T (p.Thr2371Ile) DYNC2H1 Jun 01, 2017 MedGen:CN674505 Short-rib polydactyly syndrome type III maternal;unknown 11 103187558 TCAACCTACCTAAACTTGATAAATGGGGGACCAGTACTTTGGTAGCATTCCTACAACAGGT 80356534 27948 NM_152296.4(ATP1A3):c.1838C>T (p.Thr613Met) ATP1A3 May 04, 2014 MedGen:C1868681,OMIM:128235,Orphanet:ORPHA71517 Dystonia 12 de novo;germline;inherited 19 41978041 TCATCATGGTCACCGGCGATCACCCCATCACGGCCAAGGCCATTGCCAAGGGTGTGGGCAT 74315415 28453 NM_000311.4(PRNP):c.398C>T (p.Ala133Val) PRNP Mar 13, 2007 MedGen:C0017495,OMIM:137440,Orphanet:ORPHA356,SNOMED CT:67155006 Gerstmann-Straussler-Scheinker syndrome germline 20 4699618 GGGGCCTTGGCGGCTACATGCTGGGAAGTGCCATGAGCAGGCCCATCATACATTTCGGCAG 1131691211 421138 NM_177438.2(DICER1):c.1174C>T (p.Arg392Ter) DICER1 Mar 11, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 14 95124398 GAAATCTTACGCAAATATAAACCATATGAGCGACAGCAGTTTGAAAGCGTTGAGTGGTATA 397514487 45742 NM_015426.4(POC1A):c.241C>T (p.Arg81Ter) POC1A Dec 01, 2014 MedGen:CN228289;MedGen:C3542022,OMIM:614813,Orphanet:ORPHA314394 Primordial dwarfism;Short stature, onychodysplasia, facial dysmorphism, and hypotrichosis germline 3 52149850 CCTTCGGGACACCTGCTTGCTTCCGGCTCCCGAGACAAGACTGTCCGCATCTGGGTACCCA 730880605 179173 NM_000256.3(MYBPC3):c.3775C>T (p.Gln1259Ter) MYBPC3 Feb 28, 2013 MedGen:CN517202 not provided germline 11 47332111 GGCATCTATGTCTGCAGGGCCACCAACTTACAGGGCGAGGCACGGTGTGAGTGCCGCCTGG 139620139 143268 NM_017565.3(FAM20A):c.1432C>T (p.Arg478Ter) FAM20A Jan 01, 2014 MedGen:C2931783,OMIM:204690,Orphanet:ORPHA1031,SNOMED CT:109477002 Enamel-renal syndrome germline 17 68537671 CAAGCTGACTACAGACTCAGCGATGTGATGCGAGAATCACTGCTGGAAGACCAGCTCAGCC 754129466 482203 NM_015338.5(ASXL1):c.4243C>T (p.Arg1415Ter) ASXL1 Jan 02, 2018 MedGen:CN517202 not provided germline 20 32436955 GTCATGGACTTGCCCTTCTGGAAATTACCCCGAGAGCCAGGGAAGGGGCTCAGTGAGCCTC 121909114 22511 NM_004425.3(ECM1):c.1036C>T (p.Gln346Ter) ECM1 Apr 01, 2002 MedGen:C0023795,OMIM:247100,Orphanet:ORPHA530,SNOMED CT:38692000 Lipid proteinosis germline 1 150511784 CTGGCACTGATCCAGCTGGAGAGGGAGTTCCAGCGCTGCTGCCGCCAGGGGAACAATCACA 267606855 15234 NM_001080476.2(GRXCR1):c.229C>T (p.Gln77Ter) GRXCR1 Feb 12, 2010 MedGen:C1414017,OMIM:613285 Deafness, autosomal recessive 25 germline 4 42893495 GAGTCAGAAGGTGATGAGAATGAGAATGACCAGGATAGCTTGCTGGTGTTAGCAAGGGCTG -1 480557 NM_007327.3(GRIN1):c.1666C>T (p.Gln556Ter) GRIN1 Feb 22, 2018 MedGen:CN737161,OMIM:617820 NEURODEVELOPMENTAL DISORDER WITH OR WITHOUT HYPERKINETIC MOVEMENTS AND SEIZURES, AUTOSOMAL RECESSIVE germline 9 137162205 ATTCCCCGGAGCACGCTGGACTCGTTCATGCAGCCGTTCCAGAGCACACTGTGGCTGCTGG 387906822 39177 NM_003999.2(OSMR):c.2081C>T (p.Pro694Leu) OSMR Oct 31, 2016 MedGen:C0268398,OMIM:105250;MedGen:CN517202 Primary localized cutaneous amyloidosis 1;not provided germline 5 38925240 CAGAATGTTGCAAATACAAAATTGACAACCCGGAAGAAAAGGCATTGATTGTGGACAACCT 121918545 20666 NM_001099274.1(TINF2):c.844C>T (p.Arg282Cys) TINF2 Dec 20, 2016 MedGen:C1851970,OMIM:127550;MedGen:C3151445,OMIM:613990;MedGen:CN517202 Dyskeratosis congenita autosomal dominant;Dyskeratosis congenita, autosomal dominant, 3;not provided germline 14 24240636 TGGGCCTCCACTAGGGGAGGCCATAAGGAGCGCCCCACAGTCATGCTGTTTCCCTTTAGGA 118204109 16501 NM_000190.3(HMBS):c.601C>T (p.Arg201Trp) HMBS Dec 02, 2015 MedGen:C0162565,OMIM:176000,Orphanet:ORPHA79276,SNOMED CT:234422006;MedGen:CN517202 Acute intermittent porphyria;not provided germline 11 119091515 GCTGGCCTGCAGCGCATGGGCTGGCACAACCGGGTGGGGCAGGTAGGGCCTGCCCCTATCC 1060503605 400386 NM_177438.2(DICER1):c.3007C>T (p.Arg1003Ter) DICER1 Sep 10, 2016 MedGen:CN072455,OMIM:601200 DICER1-related pleuropulmonary blastoma cancer predisposition syndrome germline 14 95105764 AATTCTTACAGACTTAATCTTTTGACACCTCGACATTTGAATCAGAAGGGGAAAGCGCTTC 1085307512 415818 NM_000307.4(POU3F4):c.232C>T (p.Gln78Ter) POU3F4 Apr 25, 2017 MedGen:CN517202 not provided germline X 83508556 TCCTCCACACTGGCCACCAGCCCCCTGGACCAGCAGGACGTGAAGCCCGGGCGCGAAGACC 201894078 441064 NM_000083.2(CLCN1):c.1876C>T (p.Arg626Ter) CLCN1 Mar 26, 2014 MedGen:CN517202 not provided germline 7 143342451 GTTTCAGCTTCTTACACATATGGGGAGTTGCGAACCCTGCTCCAGACCACCACAGTCAAGA 121908003 18864 NM_000017.3(ACADS):c.136C>T (p.Arg46Trp) ACADS Jun 30, 2017 MedGen:C0342783,OMIM:201470,Orphanet:ORPHA26792,SNOMED CT:124166007;MedGen:CN517202 Deficiency of butyryl-CoA dehydrogenase;not provided germline;unknown 12 120727115 GAGACACACCAGATGTTGCTCCAGACATGCCGGGACTTTGCCGAGAAGGAGTTGTTTCCCA 74503222 108557 NM_000277.2(PAH):c.745C>T (p.Leu249Phe) PAH May 26, 2017 MedGen:C0031485,OMIM:261600,Orphanet:ORPHA716,SNOMED CT:154735006;MedGen:CN517202 Phenylketonuria;not provided germline;unknown 12 102852912 GGTTTCCGCCTCCGACCTGTGGCTGGCCTGCTTTCCTCTCGGGATTTCTTGGGTGGCCTGG 757130394 212148 NM_014946.3(SPAST):c.1417C>T (p.Gln473Ter) SPAST May 18, 2015 MedGen:C1866855,OMIM:182601,Orphanet:ORPHA100985 Spastic paraplegia 4, autosomal dominant germline 2 32137112 AATTGAAAAAAGATTTTTTGCTTGTAGGTACAGTCTGCTGGAGATGACAGAGTACTTGTAA 397515461 76938 NM_012472.5(LRRC6):c.562C>T (p.Gln188Ter) LRRC6 Aug 08, 2013 MedGen:C3543826,OMIM:614935 Ciliary dyskinesia, primary, 19 germline 8 132632831 CTTAAACGAGCCAAACTCAAGGAAGAGGCTCAGAGGAAACACCAAGAAGAGGATAAAAATG 1057518674 361157 NM_020699.3(GATAD2B):c.694C>T (p.Gln232Ter) GATAD2B Apr 30, 2014 MedGen:C3554448,OMIM:615074,Orphanet:ORPHA363686 Mental retardation, autosomal dominant 18 de novo 1 153818075 CTATCTAAGCTTCCCTCTCGGCCTGGGGCCCAAGGGGTTGAACCTCAAAATTTGAGAACAT 724159949 171866 NM_001396.3(DYRK1A):c.613C>T (p.Arg205Ter) DYRK1A Nov 29, 2017 MedGen:C3276611;Human Phenotype Ontology:HP:0000490,MedGen:C0014306;Human Phenotype Ontology:HP:0011968,MedGen:C0232466;Human Phenotype Ontology:HP:0001249,MedGen:C1843367;Human Phenotype Ontology:HP:0001249,MedGen:C1843367;MedGen:C3279839,OMIM:614104,Orphanet:ORPHA464306;Human Phenotype Ontology:HP:0000252,MedGen:C0424688;MedGen:CN517202 Absent or delayed speech development;Deeply set eye;Feeding difficulties;Intellectual disability;Intellectual disability;Mental retardation, autosomal dominant 7;Microcephaly;not provided de novo;germline 21 37486563 GCTTTTCTGAATCAAGCACAGATAGAAGTGCGACTTCTTGAGCTCATGAACAAACATGACA 72551364 23181 NM_138712.3(PPARG):c.1189C>T (p.Arg397Cys) PPARG Jan 01, 2002 MedGen:C1720861,OMIM:604367,Orphanet:ORPHA79083 Familial partial lipodystrophy 3 germline 3 12433900 GTTGTGTTTTCCATATGTGCTTCCCCAGACCGCCCAGGTTTGCTGAATGTGAAGCCCATTG 886042253 266121 NM_003482.3(KMT2D):c.11713C>T (p.Gln3905Ter) KMT2D Jul 20, 2015 MedGen:CN030661,OMIM:147920 Kabuki syndrome 1 germline 12 49032992 GGCTCTTTACAGCAGCTTCAGCAGCAGCAGCAGCTGCAACAGCAACAGCAACTTCAGCAGC 121908854 21513 NM_001277115.1(DNAH11):c.8533C>T (p.Arg2845Ter) DNAH11 Sep 15, 2011 MedGen:C2678473,OMIM:611884 Ciliary dyskinesia, primary, 7 germline 7 21748602 TTCCTCAGGTGTCGCATCAGCCGGATCTTACGAACCCCTCAGGGCTGTGCTCTCTTGGTTG 387906804 39133 NM_006765.3(TUSC3):c.163C>T (p.Gln55Ter) TUSC3 Aug 01, 2011 MedGen:C1970197,OMIM:611093 Mental retardation, autosomal recessive 7 germline 8 15623104 TTGCAGAATCTTTTAGCTGAAAAAGTAGAGCAGCTGATGGAATGGAGTTCCAGACGCTCAA 727503007 176448 NM_001399.4(EDA):c.676C>T (p.Gln226Ter) EDA Aug 21, 2014 Human Phenotype Ontology:HP:0007607,MedGen:C1706004,Orphanet:ORPHA238468 Hypohidrotic ectodermal dysplasia germline X 70028006 CCACCTGGTCCTCCAGGTCCTCCTGGTCCTCAAGGACCCCCTGGCCTCCAGGGACCTTCTG 794729667 199855 NM_001693.3(ATP6V1B2):c.1516C>T (p.Arg506Ter) ATP6V1B2 Nov 01, 2014 MedGen:C2675730,OMIM:124480,Orphanet:ORPHA79499 Deafness, congenital, with onychodystrophy, autosomal dominant germline 8 20220382 CCTCAGAGCACCCTCAGCGAATTTTACCCTCGAGACTCTGCAAAGCATTAGCTGCTGCTTC 80356459 23348 NM_005982.3(SIX1):c.328C>T (p.Arg110Trp) SIX1 Aug 27, 2009 MedGen:C1842124,OMIM:608389 Branchiootic syndrome 3 germline 14 60648862 GGCCGACCCCTGGGCGCCGTGGGCAAATATCGGGTGCGCCGAAAATTTCCACTGCCGCGCA 62541771 21074 NM_001128227.2(GNE):c.1985C>T (p.Ala662Val) GNE May 01, 2017 MedGen:C1833373,OMIM:600737;MedGen:C1853926,OMIM:605820;MedGen:C0342853,OMIM:269921,Orphanet:ORPHA3166,SNOMED CT:238051008;MedGen:CN517202 Inclusion body myopathy 2;Nonaka myopathy;Sialuria;not provided germline;unknown 9 36218224 CTGTGGGTGCGCTCCATCTCATCCAAGCTGCGAAACTTGGCAATGCGAAGGCCCAGAGCAT 80338917 23079 NM_003221.3(TFAP2B):c.898C>T (p.Arg300Cys) TFAP2B Jan 02, 2013 MedGen:C1868570,OMIM:169100,Orphanet:ORPHA46627 Char syndrome germline 6 50838051 AAAATCGGTTTGAATTTACCCGCGGGCAGGCGCAAAGCAGCAAATGTCACGTTACTCACCT 863224483 212928 NM_000256.3(MYBPC3):c.2065C>T (p.Gln689Ter) MYBPC3 May 02, 2015 MedGen:C1861862,OMIM:115197;Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569 Familial hypertrophic cardiomyopathy 4;Hypertrophic cardiomyopathy germline 11 47339653 CCCACTGTGATCTGGCAGAAGGCTATCACGCAGGTACTGTGGGTCCCTCCTCAGTCTCCCC 137854501 24533 NM_005502.3(ABCA1):c.6241C>T (p.Arg2081Trp) ABCA1 Jul 27, 2001 MedGen:C0039292,OMIM:205400,Orphanet:ORPHA31150 Tangier disease germline 9 104786940 CCCACCACAGGCATGGATCCCAAAGCCCGGCGGTTCTTGTGGAATTGTGCCCTAAGTGTTG 137854604 24422 NM_000335.4(SCN5A):c.5126C>T (p.Ser1709Leu) SCN5A Feb 02, 2017 MedGen:C1142166,Orphanet:ORPHA130,SNOMED CT:418818005;MedGen:CN029323,OMIM:601144;MedGen:CN230736;MedGen:C2751898,OMIM:603829;EFO:EFO_0004287,MedGen:C0042510,SNOMED CT:71908006;MedGen:CN517202 Brugada syndrome;Brugada syndrome 1;Cardiovascular phenotype;Paroxysmal familial ventricular fibrillation 1;Ventricular fibrillation;not provided germline;unknown 3 38551243 GCATGCTGTGCCTCTTCCAGATCACCACGTCGGCCGGCTGGGATGGCCTCCTCAGCCCCAT 202179988 68353 NM_000492.3(CFTR):c.3208C>T (p.Arg1070Trp) CFTR Sep 29, 2016 MedGen:C0403814,OMIM:277180,Orphanet:ORPHA48;MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008;MedGen:CN517202 Congenital bilateral absence of the vas deferens;Cystic fibrosis;not provided germline 7 117611649 AAAGGACTATGGACACTTCGTGCCTTCGGACGGCAGCCTTACTTTGAAACTCTGTTCCACA 876659872 234370 NM_000051.3(ATM):c.8287C>T (p.Arg2763Ter) ATM Apr 21, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0027672,SNOMED CT:699346009 Ataxia-telangiectasia syndrome;Hereditary cancer-predisposing syndrome germline 11 108343240 CTGTAACTCCAGGTGGTTCCCCTCTCTCAGCGAAGTGGTGTTCTTGAATGGTGCACAGGAA 886037721 248825 NM_177438.2(DICER1):c.5053C>T (p.Q1685*) DICER1 Nov 10, 2014 MedGen:CN072455,OMIM:601200 DICER1-related pleuropulmonary blastoma cancer predisposition syndrome germline 14 95095867 TACAGATTCAAGAATAAGGCTTACCTTCTCCAGGCTTTTACACATGCCTCCTACCACTACA 587783564 169935 NM_178151.2(DCX):c.55C>T (p.Arg19Ter) DCX Feb 08, 2013 Human Phenotype Ontology:HP:0002282,MedGen:C0008519 Heterotopia germline X 111410344 GACGAAAGAGATAAGACATCCAGGAACATGCGAGGCTCCCGGATGAATGGGTTGCCTAGCC 930688767 481983 NM_001277269.1(OTOG):c.5092C>T (p.Gln1698Ter) OTOG Jan 11, 2018 MedGen:CN517202 not provided germline 11 17610356 ATAAGCAGGACAGGGGTCCCCCAGCCCACCCAGGCCCAGAGTGCTTCAAGTCCCAGCACCC 1064794223 411097 NM_178153.2(DCX):c.505C>T (p.Gln169Ter) DCX Mar 17, 2017 MedGen:CN517202 not provided germline X 111401190 CCCCAGTCCTTGGCTAGCAGCAACAGTGCACAGGCCAGGGAGAACAAGGACTTTGTGCGCC 756457861 170942 NM_030777.3(SLC2A10):c.685C>T (p.Arg229Ter) SLC2A10 Nov 08, 2016 MedGen:C1859726,OMIM:208050,Orphanet:ORPHA3342;MedGen:CN118826,Orphanet:ORPHA91387 Arterial tortuosity syndrome;Thoracic aortic aneurysm and aortic dissection germline 20 46725721 CTGGACCTCTTCAGGGCACGCGATAACATGCGAGGCCGGACCACAGTGGGCCTGGGGCTGG 766891274 429189 NM_000525.3(KCNJ11):c.406C>T (p.Arg136Cys) KCNJ11 Mar 01, 2016 MedGen:C0027773,OMIM:601820,SNOMED CT:42681006 Islet cell hyperplasia germline 11 17387686 GAGGTCCAAGTGACTATTGGCTTTGGGGGGCGCATGGTGACTGAGGAGTGCCCACTGGCCA 775865076 421364 NM_015311.2(OBSL1):c.2032C>T (p.Gln678Ter) OBSL1 Oct 28, 2015 MedGen:CN517202 not provided germline 2 219566932 CTGCGGTACCGTATAGAGCAGAAGGGTCTGCAGCACAGACTCATCCTGCATGCCGTCAAGC 869025292 223293 NM_015160.2(PMPCA):c.287C>T (p.Ser96Leu) PMPCA Oct 12, 2016 MedGen:C1859298,OMIM:213200,Orphanet:ORPHA1170 Spinocerebellar ataxia, autosomal recessive 2 germline 9 136412502 TTTTCTTTTTACTACTAGTTCTTATCAATTCAGGATCGAGATATGAAGCGAAATACCTTAG 397514637 48581 NM_001080463.1(DYNC2H1):c.988C>T (p.Arg330Cys) DYNC2H1 Jun 01, 2017 MedGen:C0265275,Orphanet:ORPHA474,SNOMED CT:75049004;MedGen:CN674505;MedGen:C2751311,OMIM:613091,SNOMED CT:254051008 Jeune thoracic dystrophy;Short-rib polydactyly syndrome type III;Short-rib thoracic dysplasia 3 with or without polydactyly germline;maternal;unknown 11 103117852 TTTCCAGAAACACTTGACAAACTTGGCAAACGCCTTGAAGAGGTATCAATTTGATTATCTA 122454128 26696 NM_004586.2(RPS6KA3):c.2065C>T (p.Gln689Ter) RPS6KA3 Jan 01, 1999 MedGen:C0265252,OMIM:303600,SNOMED CT:15182000 Coffin-Lowry syndrome germline X 20156144 ATCGTCCACTGGGACCAACTGCCACAATACCAACTAAACAGACAGGATGCACCACATCTAG 587777894 166563 NM_004958.3(MTOR):c.6644C>T (p.Ser2215Phe) MTOR May 25, 2017 MeSH:D015179,MedGen:CN236642;MedGen:C1846385,OMIM:607341,Orphanet:ORPHA268994;Human Phenotype Ontology:HP:0100843,MeSH:D005909,MedGen:C0017636,SNOMED CT:63634009;MeSH:C562393,MedGen:C0151779,SNOMED CT:93655004;MedGen:C0153574,Orphanet:ORPHA213569;MeSH:C538614,MedGen:C1336078;Human Phenotype Ontology:HP:0005584,MeSH:D002292,MedGen:C0007134,OMIM:605074,Orphanet:ORPHA217071,SNOMED CT:41607009;MeSH:D002583,MedGen:CN236667;MedGen:CN517202 Colorectal Neoplasms;Focal cortical dysplasia type II;Glioblastoma;Malignant melanoma of skin;Malignant neoplasm of body of uterus;Papillary renal cell carcinoma, sporadic;Renal cell carcinoma, papillary, 1;Uterine cervical neoplasms;not provided somatic 1 11124516 TTAACACCCTTCTGGCCAATGACCCAACATCTCTTCGGAAAAACCTCAGGTATTCAGAAAC 886039790 260551 NM_012343.3(NNT):c.211C>T (p.Arg71Ter) NNT Oct 11, 2016 MedGen:C3553587,OMIM:614736 Glucocorticoid deficiency 4 with or without mineralocorticoid deficiency germline 5 43612967 GTCCCCAAAGAGATATTCCAAAATGAGAAGCGAGTGGCATTGTCTCCTGCTGGTGTTCAGA 121909564 33070 NM_000488.3(SERPINC1):c.1382C>T (p.Pro461Leu) SERPINC1 Sep 06, 2017 MedGen:C0272375,OMIM:613118,Orphanet:ORPHA82,SNOMED CT:36351005 Antithrombin III deficiency germline 1 173903902 CTATTATCTTCATGGGCAGAGTAGCCAACCCTTGTGTTAAGTAAAATGTTCTTATTCTTTG 768345097 186768 NM_019098.4(CNGB3):c.646C>T (p.Arg216Ter) CNGB3 Mar 27, 2017 MedGen:C1849792,OMIM:262300 Achromatopsia 3 germline;unknown 8 86667131 TGGATTTCACCACTTGCTGTTTTTCCAGATCGACTCTATCTCCTGTGGCTCTTGCTTGTCA 146733615 172511 NM_206933.2(USH2A):c.14803C>T (p.Arg4935Ter) USH2A Aug 18, 2016 MedGen:C3151138,OMIM:613809;MedGen:C3151138,OMIM:613809;MedGen:C1848634,OMIM:276901;MedGen:C1848634,OMIM:276901 Retinitis pigmentosa 39;Retinitis pigmentosa 39;Usher syndrome, type 2A;Usher syndrome, type 2A germline;unknown 1 215640723 TACAACTTTCTCCCCACAGTGCCTCAGTACCGAGCCCCATTTTCGGTGGACAGCAATTTGT 398122418 94557 NM_019066.4(MAGEL2):c.3124C>T (p.Gln1042Ter) MAGEL2 May 27, 2016 MedGen:C3809877,OMIM:615547,Orphanet:ORPHA398069;MedGen:CN517202 Schaaf-yang syndrome;not provided de novo;germline 15 23644619 TTAGTCAAGGACCAAGCCAAGGTGCCTGTCCAGCGCTCGGAGATGGTGAAAGTCATCCTCC 28934594 27137 NM_000196.3(HSD11B2):c.835C>T (p.Arg279Cys) HSD11B2 Aug 01, 1998 MedGen:C2936861,OMIM:218030 Apparent mineralocorticoid excess germline 16 67436620 TCAGTGAGAAACGTGGGTCAGTGGGAAAAGCGCAAGCAATTGCTGCTGGCCAACCTGCCTC -1 481821 NM_017780.3(CHD7):c.3859C>T (p.Gln1287Ter) CHD7 Dec 20, 2017 MedGen:CN517202 not provided germline 8 60836153 TCTCCAGATTTTCAGCTCCAGGCAATGATCCAGGCTGCTGGCAAGCTAGTGCTGATTGACA 750903875 474531 NM_005431.1(XRCC2):c.49C>T (p.Arg17Ter) XRCC2 May 30, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 7 152660773 CCTTCTCTCTTCTTTTATAAGCTCCTTGCCCGACTTGAAGGTAGAAGTTCCTTGAAAGAAA 11466112 29084 NM_002506.2(NGF):c.661C>T (p.Arg221Trp) NGF Feb 01, 2011 MedGen:C0020075,OMIM:608654,Orphanet:ORPHA64752,SNOMED CT:128206006 Congenital sensory neuropathy with selective loss of small myelinated fibers germline 1 115286135 CTGACCATGGATGGCAAGCAGGCTGCCTGGCGGTTTATCCGGATAGATACGGCCTGTGTGT 121917788 27080 NM_001018115.2(FANCD2):c.958C>T (p.Gln320Ter) FANCD2 Feb 01, 2001 MedGen:C3160738,OMIM:227646 Fanconi anemia, complementation group D2 germline 3 10043119 TGTGTTTTGCCATCACGGTTACAGGCTTCCCAAGTAAAGTTGAAAAGTAAAGGACGAGCAA -1 426440 NM_198270.3(NHS):c.553C>T (p.Gln185Ter) NHS Jun 08, 2017 MedGen:CN517202 not provided germline X 17376310 CAGCGCGTCCTCAGCACGCTTGACCCTAAGCAGGAGGCAGTGCGTGAGTACCCGCGCCGTC 121908547 20943 NM_000334.4(SCN4A):c.3938C>T (p.Thr1313Met) SCN4A Jun 14, 2017 MedGen:CN074266,OMIM:170500;MedGen:C1868617,OMIM:168300;MedGen:CN517202 Hyperkalemic Periodic Paralysis Type 1;Paramyotonia congenita of von Eulenburg;not provided germline;maternal;unknown 17 63943825 TATACTTAGGGGGGAAAGACATCTTTATGACGGAGGAACAGAAGAAATACTATAACGCCAT 587782574 152309 NM_032043.2(BRIP1):c.2377C>T (p.Gln793Ter) BRIP1 Jul 27, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline 17 61743015 GGAATTCCTTTTCCAAATGTGAAAGATCTACAGGTAGGCCATCAAAACCTTAAGTTTTATT 886039261 259357 NM_001242896.1(DEPDC5):c.1555C>T (p.Gln519Ter) DEPDC5 Mar 03, 2017 Gene:50987,MedGen:C1858477,OMIM:604364 Epilepsy, familial focal, with variable foci 1 germline 22 31815101 CGCACACTGCCCACTGAGGAAGTGAGGAGCCAGGCTTCTGACGACAGCTCCCTAGGCAAGA -1 485878 NM_006088.5(TUBB4B):c.1171C>T (p.Arg391Cys) TUBB4B Feb 16, 2018 MedGen:CN807950,OMIM:617879 LEBER CONGENITAL AMAUROSIS WITH EARLY-ONSET DEAFNESS germline 9 137243389 ATCTCCGAGCAGTTCACGGCCATGTTCCGGCGCAAGGCCTTCCTGCACTGGTACACGGGCG 1800575 27674 NM_000458.3(HNF1B):c.529C>T (p.Arg177Ter) HNF1B Dec 01, 1997 MedGen:C0431693,OMIM:137920,SNOMED CT:253864004 Familial hypoplastic, glomerulocystic kidney germline 17 37739455 GCTCTGTACACCTGGTACGTCAGAAAGCAACGAGAGATCCTCCGACGTAAGTGTTTTCATC 786201032 181576 NM_001025295.2(IFITM5):c.119C>T (p.Ser40Leu) IFITM5 Dec 28, 2015 MedGen:C1970414,OMIM:610967,Orphanet:ORPHA216828;MedGen:CN517202 Osteogenesis imperfecta type 5;not provided germline 11 299372 ACCCCCCGCCTCGAGACCACTTGATCTGGTCGGTGTTCAGCACCCTCTACCTGAATCTGTG 28940306 17236 NM_001145809.1(MYH14):c.3049C>T (p.Leu1017Phe) MYH14 Apr 01, 2004 MedGen:C1833503,OMIM:600652 Deafness, autosomal dominant 4 germline 19 50271424 GCCTTCCCACCCCAGGAGCTAGAGGCCCACCTTGAGGCTGAGGAGGGTGCGCGGCAGAAGC 121908137 19452 NM_020919.3(ALS2):c.2992C>T (p.Arg998Ter) ALS2 Feb 10, 2011 MedGen:C1846588,OMIM:607225 Infantile-onset ascending hereditary spastic paralysis germline 2 201726854 GTTACTTTTTGCTCCTAGACAAAGTGGCTACGAGCTATAAGCCAAGCCGTAGATCAGGCTT 202210819 133696 NM_018474.5(KIZ):c.226C>T (p.Arg76Ter) KIZ Apr 03, 2014 MedGen:C4014312,OMIM:615780 Retinitis pigmentosa 69 germline 20 21136463 ATATGTGAATCTGAAAAGAAGGCTCATACTCGAAACCAAGAATATTTAAAGCGATTTGAGC 758355520 186876 NM_000053.3(ATP7B):c.3818C>T (p.Pro1273Leu) ATP7B Aug 14, 2017 MedGen:C0019202,OMIM:277900,Orphanet:ORPHA905,SNOMED CT:88518009 Wilson disease germline;unknown 13 51937561 CCATGGTGGGGGATGGGGTCAATGACTCCCCGGCCTTGGCCCAGGCAGACATGGGTGTGGC 80356932 69850 NM_007294.3(BRCA1):c.4372C>T (p.Gln1458Ter) BRCA1 May 18, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome germline;somatic 17 43076600 CTCATTCCATTTAAAGCAGTATTAACTTCACAGAAAAGTAGTGAATACCCTATAAGCCAGA 863225357 214727 NM_000038.5(APC):c.4645C>T (p.Gln1549Ter) APC - MedGen:CN517202 not provided unknown 5 112840239 TCAGAGCAGCCTAAAGAATCAAATGAAAACCAAGAGAAAGAGGCAGAAAAAACTATTGATT 121912651 27386 NM_000546.5(TP53):c.742C>T (p.Arg248Trp) TP53 Sep 27, 2017 Human Phenotype Ontology:HP:0004808,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:ORPHA519,SNOMED CT:17788007;Human Phenotype Ontology:HP:0030078,MeSH:C538231,MedGen:C0152013;MedGen:C0007112;MedGen:C0278701;Human Phenotype Ontology:HP:0010796,MedGen:C0677865;Human Phenotype Ontology:HP:0011459,MedGen:C0152018,Orphanet:ORPHA70482;Human Phenotype Ontology:HP:0005550,MeSH:D015451,MedGen:C0023434,OMIM:151400,SNOMED CT:277473004,SNOMED CT:51092000;MeSH:D015179,MedGen:CN236642;Human Phenotype Ontology:HP:0100843,MeSH:D005909,MedGen:C0017636,SNOMED CT:63634009;MedGen:C2239176,OMIM:114550,Orphanet:ORPHA88673,SNOMED CT:187769009,SNOMED CT:25370001;MedGen:C0027672,SNOMED CT:699346009;MedGen:C0085390,Orphanet:ORPHA524,SNOMED CT:428850001;Gene:553989,MedGen:C1835398,OMIM:151623;MeSH:C562393,MedGen:C0151779,SNOMED CT:93655004;MedGen:C0153574,Orphanet:ORPHA213569;Human Phenotype Ontology:HP:0002885,MeSH:D008527,MedGen:C0025149,OMIM:155255,Orphanet:ORPHA616;Human Phenotype Ontology:HP:0006775,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:ORPHA29073,SNOMED CT:109989006,SNOMED CT:55921005;MeSH:D009190,MedGen:C0026986,OMIM:614286;MeSH:D009369,MedGen:C0027651,SNOMED CT:108369006;Human Phenotype Ontology:HP:0030692,MeSH:D001932,MedGen:C0006118,SNOMED CT:126952004;Human Phenotype Ontology:HP:0100013,MeSH:D001943,MedGen:C1458155,Orphanet:ORPHA180250,SNOMED CT:126926005;MedGen:C0279663;Human Phenotype Ontology:HP:0006725,MedGen:C0281361;Gene:7864,Human Phenotype Ontology:HP:0030357,MeSH:D055752,MedGen:C0149925,OMIM:182280,Orphanet:ORPHA70573;Human Phenotype Ontology:HP:0030359,MedGen:C0149782;MeSH:C535575,MedGen:C1168401,OMIM:275355,Orphanet:ORPHA67037;Human Phenotype Ontology:HP:0006739,MedGen:C0553723;Human Phenotype Ontology:HP:0006740,MedGen:C0279680;MedGen:C0280630;MedGen:CN517202 Acute myeloid leukemia;Adenocarcinoma of lung;Adenocarcinoma of prostate;Adenocarcinoma of stomach;Brainstem glioma;Carcinoma of esophagus;Chronic lymphocytic leukemia;Colorectal Neoplasms;Glioblastoma;Hepatocellular carcinoma;Hereditary cancer-predisposing syndrome;Li-Fraumeni syndrome;Li-Fraumeni syndrome 1;Malignant melanoma of skin;Malignant neoplasm of body of uterus;Medulloblastoma;Multiple myeloma;Myelodysplastic syndrome;Neoplasm;Neoplasm of brain;Neoplasm of the breast;Ovarian Serous Cystadenocarcinoma;Pancreatic adenocarcinoma;Small cell lung cancer;Squamous cell carcinoma of lung;Squamous cell carcinoma of the head and neck;Squamous cell carcinoma of the skin;Transitional cell carcinoma of the bladder;Uterine Carcinosarcoma;not provided germline;somatic;unknown 17 7674221 TGTAACAGTTCCTGCATGGGCGGCATGAACCGGAGGCCCATCCTCACCATCATCACACTGG 886041135 265154 NM_000047.2(ARSE):c.1711C>T (p.Gln571Ter) ARSE Oct 24, 2016 MedGen:CN517202 not provided germline X 2934891 AGGCTGGGCAACATCTGGAGACCGTGGCTGCAGCCCTGCTGTGGCCCGTTCCCCCTCTGCT 186031457 259751 NM_000532.4(PCCB):c.337C>T (p.Arg113Ter) PCCB Oct 20, 2016 MedGen:CN517202 not provided germline 3 136256588 CCTGGAGACAGCGTGGTCACTGGACGAGGCCGAATCAATGGAAGATTGGTTTATGTCTTCA 104894195 19927 NM_003977.3(AIP):c.910C>T (p.Arg304Ter) AIP Jun 21, 2012 MedGen:C0346302,OMIM:102200,Orphanet:ORPHA96256,SNOMED CT:254957009 Somatotroph adenoma germline 11 67490910 CTGGACCCAGCCCTGGCGCCTGTGGTGAGCCGAGAGCTGCGGGCCCTGGAGGCACGGATCC 766551411 427446 NM_001009944.2(PKD1):c.12010C>T (p.Gln4004Ter) PKD1 Oct 03, 2016 MedGen:C0085548,OMIM:263200,Orphanet:ORPHA731,SNOMED CT:28770003 Autosomal recessive polycystic kidney disease germline 16 2090802 AGCAGACAGATTTCTCGTCCGCAGGCTGCCCAGCAGCTACGCTTCGTGCGCCAGTGGTCCG 76539814 19345 NM_001005741.2(GBA):c.1085C>T (p.Thr362Ile) GBA May 01, 2013 MedGen:C0268250,OMIM:230900,Orphanet:ORPHA77260,SNOMED CT:12246008;MedGen:C1961835,OMIM:230800,SNOMED CT:62201009 Acute neuronopathic Gaucher's disease;Gaucher's disease, type 1 germline 1 155236384 ACCTGGACTTTCTGGCTCCAGCCAAAGCCACCCTAGGGGAGACACACCGCCTGTTCCCCAA 28999112 33358 NM_001614.3(ACTG1):c.833C>T (p.Thr278Ile) ACTG1 Dec 01, 2003 MedGen:C1858172,OMIM:604717 Deafness, autosomal dominant 20 germline 17 81511078 GTATGGAATCTTGCGGCATCCACGAGACCACCTTCAACTCCATCATGAAGTGTGACGTGGA 886041847 264070 NM_015265.3(SATB2):c.1285C>T (p.Arg429Ter) SATB2 Jun 30, 2016 MedGen:CN517202 not provided germline 2 199328799 CAGAATTTCCTCAATCTGCCAGAAGTGGAGCGAGATCGCATCTACCAGGATGAGAGGGAGC 387907110 40068 NM_018699.3(PRDM5):c.1768C>T (p.Arg590Ter) PRDM5 Jun 10, 2011 MedGen:C3280011,OMIM:614170 Brittle cornea syndrome 2 germline 4 120695236 TTGGCTTTTAGCCTGAAGAAAATGCTGATTCGACACAAGATGACTCATAATCCCAATCGTC 387907008 39729 NM_005461.4(MAFB):c.212C>T (p.Pro71Leu) MAFB Mar 09, 2012 MedGen:C2674705,OMIM:166300,Orphanet:ORPHA2774 Multicentric osteolysis nephropathy germline 20 40688639 GCACTCCGTGTAGCTCCGTGCCCTCGTCGCCCAGCTTCAGCCCGACCGAACAGAAGACACA 797045085 205156 NM_001277115.1(DNAH11):c.8746C>T (p.Gln2916Ter) DNAH11 Aug 01, 2014 MedGen:C2678473,OMIM:611884 Ciliary dyskinesia, primary, 7 germline 7 21749750 ATGCCCACTGTGTTCCTGCTGACAGATGCCCAGGTTCTAGATGAGAGCTTCCTCGTGCTGA 1057517977 359394 NM_001271208.1(NEB):c.9046C>T (p.Arg3016Ter) NEB Nov 10, 2016 MedGen:CN517202 not provided germline 2 151636283 GAAGAAGCAAAGAAGAAAGGCTATGACTTGCGAAGCGACGCCATCCCCATCGTGGCGGCCA 199422311 47523 NM_001099274.1(TINF2):c.847C>T (p.Pro283Ser) TINF2 Jun 01, 2015 MedGen:C1851970,OMIM:127550;MedGen:CN517202 Dyskeratosis congenita autosomal dominant;not provided germline 14 24240633 GCCTCCACTAGGGGAGGCCATAAGGAGCGCCCCACAGTCATGCTGTTTCCCTTTAGGAATC 140709867 106534 NM_025233.6(COASY):c.1495C>T (p.Arg499Cys) COASY Jan 02, 2014 MedGen:C3810230,OMIM:615643,Orphanet:ORPHA397725 Neurodegeneration with brain iron accumulation 6 germline 17 42565668 AAATGTCTCGTCTGTGCTCAGGCTGTAAGACGCATTGTGGAGAGGGATGGCCTCAGTGAAG 587777686 164077 NM_006904.6(PRKDC):c.10721C>T (p.Ala3574Val) PRKDC Jul 01, 2013 MedGen:C4014833,OMIM:615966,Orphanet:ORPHA317425 Immunodeficiency 26 with or without neurologic abnormalities germline 8 47789188 AAGGAGGAGTGATTCAAGATTTTATTAATGCCTTAGATCAGCTCTCTAATCCTGAACTGCT 28937869 20652 NM_007255.2(B4GALT7):c.808C>T (p.Arg270Cys) B4GALT7 Nov 29, 2016 MedGen:C1869122,OMIM:130070,Orphanet:ORPHA75496;MedGen:C1855536,OMIM:245600;MedGen:CN517202 Ehlers-Danlos syndrome progeroid type;Multiple joint dislocations, short stature, craniofacial dysmorphism, and congenital heart defects;not provided germline;inherited 5 177608994 GACCCAGCCTGGCGGAAGAGGGACCAGAAGCGCATCGCAGCTCAAAAACAGGTGCTGGCAG 387906946 39551 NM_020634.2(GDF3):c.820C>T (p.Arg274Trp) GDF3 Jan 15, 2010 MedGen:C3150968,OMIM:613703 Microphthalmia, isolated, with coloboma 6 germline 12 7690153 TGCCACCGTCACCAGCTATTCATTAACTTCCGGGACCTGGGTTGGCACAAGTGGATCATTG 764389018 186800 NM_000051.3(ATM):c.5188C>T (p.Arg1730Ter) ATM Mar 27, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0027672,SNOMED CT:699346009 Ataxia-telangiectasia syndrome;Hereditary cancer-predisposing syndrome germline;unknown 11 108301658 ATTTGAATTGTTTTTTTCAGTGTCAAAGTTCGATCAGCAGCTGTTACCTGTTTGAAAAACA -1 458971 NM_017780.3(CHD7):c.604C>T (p.Gln202Ter) CHD7 Mar 10, 2017 MedGen:C0265354,OMIM:214800,Orphanet:ORPHA138,SNOMED CT:47535005 CHARGE association germline 8 60742036 TATATGGCACGTGGGGATTTTTCCATGCAGCAGCATGGTCAGCCACAGCAGAGGATGAGCC 886042195 265830 NM_001128227.2(GNE):c.2008C>T (p.Gln670Ter) GNE Jul 15, 2015 MedGen:C1833373,OMIM:600737 Inclusion body myopathy 2 germline 9 36218201 CAAGCTGCGAAACTTGGCAATGCGAAGGCCCAGAGCATCCTAAGAACAGGTGAGCATGTGG 61751397 105086 NM_000350.2(ABCA4):c.3085C>T (p.Gln1029Ter) ABCA4 Jan 01, 2016 MeSH:C535804,MedGen:C1855465,OMIM:248200;MedGen:CN517202 Stargardt disease 1;not provided germline 1 94043441 ACGGTGGCTGAGCACATGCTGTTCTATGCCCAGCTGAAAGGAAAGTCCCAGGAGGAGGCCC 59793293 31210 NM_002055.4(GFAP):c.235C>T (p.Arg79Cys) GFAP Jan 17, 2017 MedGen:C0270726,OMIM:203450,Orphanet:ORPHA58,SNOMED CT:81854007;MedGen:CN517202 Alexander's disease;not provided germline 17 44915252 GAGCGGGCAGAGATGATGGAGCTCAATGACCGCTTTGCCAGCTACATCGAGAAGGTTCGCT 199473421 78266 NM_000238.3(KCNH2):c.215C>T (p.Pro72Leu) KCNH2 Feb 12, 2015 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MedGen:CN517202 Congenital long QT syndrome;not provided germline 7 150974803 GACCCTGCACCTGCGACTTCCTGCACGGGCCGCGCACGCAGCGCCGCGCTGCCGCGCAGAT 121908916 21401 NM_002977.3(SCN9A):c.829C>T (p.Arg277Ter) SCN9A Apr 01, 2007 MedGen:C1855739,OMIM:243000,Orphanet:ORPHA88642 Indifference to pain, congenital, autosomal recessive germline 2 166303162 TTCATGGGAAACCTGAAGCATAAATGTTTTCGAAATTCACTTGAAAATAATGAAACATTAG 863224959 213830 NM_000070.2(CAPN3):c.1714C>T (p.Arg572Trp) CAPN3 Oct 05, 2015 MedGen:C1869123,OMIM:253600,Orphanet:ORPHA267 Limb-girdle muscular dystrophy, type 2A germline 15 42402971 GAGCCCCACCAGGAGGGGGAATTCATCCTCCGGGTCTTCTCTGAAAAGAGGAACCTCTCTG 886041290 264039 NM_005378.5(MYCN):c.73C>T (p.Gln25Ter) MYCN Aug 20, 2015 MedGen:CN517202 not provided germline 2 15942137 AAGAACCCAGACCTCGAGTTTGACTCGCTACAGCCCTGCTTCTACCCGGACGAAGATGACT -1 446320 NM_001396.4(DYRK1A):c.967C>T (p.Gln323Ter) DYRK1A Jul 05, 2017 MedGen:CN517202 not provided germline 21 37493032 TGAAATATATTTCAGATATACCAGTATATTCAGAGTCGCTTTTATCGGTCTCCAGAGGTGC 879253848 224622 NM_000255.3(MUT):c.1975C>T (p.Gln659Ter) MUT - MedGen:C1855114,OMIM:251000 Methylmalonic aciduria due to methylmalonyl-CoA mutase deficiency germline 6 49435605 CTGACTGTTTAGACTCCTCGTGAAGTGGCCCAGCAGGCTGTGGATGCGGATGTGCATGCTG 267608066 95034 NM_000179.2(MSH6):c.730C>T (p.Gln244Ter) MSH6 Sep 05, 2013 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Lynch syndrome germline 2 47798713 AAGACACAAGGATCTAGGCGAAGTAGCCGCCAAATAAAAAAACGAAGGGTCATATCAGATT 281865143 49462 NM_001080116.1(LDB3):c.440C>T (p.Ala147Val) LDB3 Oct 29, 2012 MedGen:C1836155,OMIM:609452,Orphanet:ORPHA98912 Myofibrillar myopathy, ZASP-related not provided 10 86687164 CCATCGAGGTGAAGGGGCTGGGCGGCAAGGCCACCATCATCCATGCGCAGTACAACACGCC 864321635 216957 NM_002968.2(SALL1):c.3160C>T (p.Arg1054Ter) SALL1 Jan 14, 2016 MedGen:CN034849,OMIM:107480 Townes-Brocks syndrome 1 germline 16 51139062 TTGAAGCAGCACATGTTGACACATCAGATGCGAGATCTGCCATCCCAGCTCTTTGAGCCCA 148905512 225787 NM_183050.3(BCKDHB):c.554C>T (p.Pro185Leu) BCKDHB Jan 01, 2010 MedGen:C0024776,OMIM:248600,SNOMED CT:27718001 Maple syrup urine disease germline 6 80168951 TTAACTGTGGAAGCCTCACTATCCGGTCCCCTTGGGGCTGTGTTGGTCATGGGGCTCTCTA 121918356 22596 NM_000428.2(LTBP2):c.331C>T (p.Gln111Ter) LTBP2 May 01, 2009 MedGen:C2751316,OMIM:613086 Glaucoma 3, primary congenital, d germline 14 74611614 GCGGAGGCCAGGAGGCCGTCCCGCGCGCAGCAGTCGCGGCGTGTCCAGCCACCTGCGCAGA 74315312 17111 NM_020435.3(GJC2):c.268C>T (p.Pro90Ser) GJC2 Apr 01, 2007 MedGen:C1837355,OMIM:608804,Orphanet:ORPHA280270 Leukodystrophy, hypomyelinating, 2 germline 1 228158026 TGGGTCTTCCAGATTGTGGTCATCTCCACGCCCTCGGTCATGTACCTGGGCTACGCCGTGC 111033664 36474 NM_000155.3(GALT):c.238C>T (p.Arg80Ter) GALT Jan 07, 2016 MedGen:C0268151,OMIM:230400,Orphanet:ORPHA79239,SNOMED CT:124354006 Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase unknown 9 34647244 CCTCTCAACCCTCTGTGTCCTGGGGCCATCCGAGCCAACGGAGAGGTAAGCCTGTAGAGCC 796052246 203850 NM_000026.3(ADSL):c.853C>T (p.Gln285Ter) ADSL Sep 14, 2012 MedGen:CN517202 not provided germline 22 40361333 CTCAAGGAGATGGAGGAACCCTTTGAAAAACAGCAGATTGGTGAGTGCTGTGTAGAGACCT 397507544 49027 NM_002834.4(PTPN11):c.1505C>T (p.Ser502Leu) PTPN11 Jul 10, 2017 MeSH:D009634,MedGen:C0028326,Orphanet:ORPHA648,SNOMED CT:205824006;MedGen:CN517202 Noonan syndrome;not provided germline 12 112489081 AAACCATCCAGATGGTGCGGTCTCAGAGGTCAGGGATGGTCCAGACAGAAGCACAGTACCG 121909090 22319 NM_001005360.2(DNM2):c.1105C>T (p.Arg369Trp) DNM2 Feb 08, 2013 MedGen:CN221282;MedGen:C1834558,OMIM:160150,Orphanet:ORPHA169189 Myopathy, centronuclear;Myopathy, centronuclear, 1 germline 19 10793832 GGCGCCCGAATCAATCGCATCTTCCACGAGCGGTTCCCATTTGAGCTGGTGAAGGTAGTGC 886041322 264612 NM_004572.3(PKP2):c.658C>T (p.Gln220Ter) PKP2 Jan 30, 2017 MedGen:CN517202 not provided germline 12 32878222 AGGCAGCGCCACTTTGACACATACCACAGACAGTACCAGCATGGCTCTGTTAGCGACACCG 1057517716 360708 NM_000390.3(CHM):c.1342C>T (p.Gln448Ter) CHM Nov 19, 2015 MedGen:CN517202 not provided germline X 85901091 TACTTTCCTGAGAACATGTGCTCACGTGTGCAATACAGGTAAGGCCCCCTCCACCCATTAG 104894065 23023 NM_000474.3(TWIST1):c.211C>T (p.Gln71Ter) TWIST1 Jul 01, 2003 MedGen:C1867146,OMIM:180750 Robinow Sorauf syndrome germline 7 19117111 GGAGGCGGCGACGAGCCGGGCAGCCCGGCCCAGGGCAAGCGCGGCAAGAAGTCTGCGGGCT 587784357 169813 NM_003560.3(PLA2G6):c.517C>T (p.Gln173Ter) PLA2G6 Jul 09, 2013 Human Phenotype Ontology:HP:0012675,MedGen:C4021076 Iron accumulation in brain germline 22 38143197 GGTGATGGGGAGATCCTGGTGGAGCTGGTGCAGTACTGCCACACTCAGATGGATGTCACCG 869312708 225882 NM_001396.3(DYRK1A):c.1639C>T (p.Gln547Ter) DYRK1A Feb 25, 2016 MedGen:C3279839,OMIM:614104,Orphanet:ORPHA464306;MedGen:CN517202 Mental retardation, autosomal dominant 7;not provided de novo;germline 21 37506191 CACAGTGGTGGGCACTTCACAGCTGCCGTGCAGGCCATGGACTGCGAGACACACAGTCCCC 794726778 187821 NM_001165963.1(SCN1A):c.1834C>T (p.Arg612Ter) SCN1A Dec 20, 2014 MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002 Severe myoclonic epilepsy in infancy de novo 2 166043878 GAGAGCCGTAGAGATTCCTTGTTTGTGCCCCGACGACACGGAGAGAGACGCAACAGCAACC 397516037 51905 NM_000256.3(MYBPC3):c.3697C>T (p.Gln1233Ter) MYBPC3 Aug 04, 2017 MedGen:CN230736;MedGen:C1861862,OMIM:115197;Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Cardiovascular phenotype;Familial hypertrophic cardiomyopathy 4;Hypertrophic cardiomyopathy;Primary familial hypertrophic cardiomyopathy;not provided germline 11 47332189 GAAGACGCCCGCTTCCGCATGTTCAGCAAGCAGGGAGTGTTGACTCTGGAGATTAGAAAGC 63750489 95909 NM_000249.3(MLH1):c.901C>T (p.Gln301Ter) MLH1 Feb 05, 2015 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Lynch syndrome germline 3 37020326 TATTTTCCTGACAGTTTAGAAATCAGTCCCCAGAATGTGGATGTTAATGTGCACCCCACAA 387906636 38685 NM_000834.3(GRIN2B):c.2044C>T (p.Arg682Cys) GRIN2B Jan 21, 2014 MedGen:C3151411,OMIM:613970 Mental retardation, autosomal dominant 6 de novo;germline 12 13571931 CAGAGACCTAATGACTTCTCACCCCCTTTCCGCTTTGGGACCGTGCCCAACGGCAGCACAG 794728877 196894 NM_198056.2(SCN5A):c.3994C>T (p.Pro1332Ser) SCN5A Oct 17, 2012 MedGen:CN517202 not provided germline 3 38560398 GTGGTGGTCAATGCCCTGGTGGGCGCCATCCCGTCCATCATGAACGTCCTCCTCGTCTGCC -1 481732 NM_022455.4(NSD1):c.3481C>T (p.Gln1161Ter) NSD1 Dec 04, 2017 MedGen:CN517202 not provided germline 5 177211880 GTAAATCAAGTGGTGCCTAAAAAGCGGTGGCAGCGTTTAAACCAAAGGCGCACTAAACCTC 587777585 151141 NM_001167734.1(VARS2):c.1100C>T (p.Thr367Ile) VARS2 Nov 16, 2017 MedGen:C4014660,OMIM:615917,Orphanet:ORPHA420728 Combined oxidative phosphorylation deficiency 20 germline;maternal 6 30918851 CTTCAGATGCAGAGGTTGTGGTAGGAACCACAAGGCCAGAGACGCTGCCTGGAGATGTGGC 63751428 95376 NM_000249.3(MLH1):c.184C>T (p.Gln62Ter) MLH1 Apr 14, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Lynch syndrome;not provided germline 3 36996686 AAAGAGGGAGGCCTGAAGTTGATTCAGATCCAAGACAATGGCACCGGGATCAGGGTAAGTA 312262795 49683 NM_024408.3(NOTCH2):c.1147C>T (p.Pro383Ser) NOTCH2 Feb 28, 2013 MedGen:C1857761,OMIM:610205,Orphanet:ORPHA261629 Alagille syndrome 2 not provided 1 119968194 TGTCATCTGGATGATGCATGCATCAGCAATCCTTGCCACAAGGGGGCACTGTGTGACACCA 267606729 17379 NM_130468.3(CHST14):c.842C>T (p.Pro281Leu) CHST14 Aug 01, 2010 MedGen:C1866294,OMIM:601776 Ehlers-Danlos syndrome, musculocontractural type germline 15 40472055 ACCCTGAGCGCATGAATGAGCATTGGATGCCCGTGTACCACCTGTGCCAGCCTTGTGCCGT 121909288 23291 NM_000020.2(ACVRL1):c.1450C>T (p.Arg484Trp) ACVRL1 Dec 08, 2016 MedGen:C1838163,OMIM:600376;MedGen:C1832529;MedGen:CN169374 Hereditary hemorrhagic telangiectasia type 2;Pulmonary arterial hypertension related to hereditary hemorrhagic telangiectasia;not specified germline 12 51920831 CCAAACCCCTCTGCCCGACTCACCGCGCTGCGGATCAAGAAGACACTACAAAAAATTAGCA 797044999 205004 NM_005097.3(LGI1):c.1418C>T (p.Ser473Leu) LGI1 Aug 27, 2015 MedGen:C1838062,OMIM:600512,Orphanet:ORPHA101046 Epilepsy, lateral temporal lobe, autosomal dominant germline 10 93797547 CCTCGTTCCAGGATATTCAGAGGATGCCATCGCGAGGATCCATGGTGTTCCAGCCTCTTCA 63751275 95488 NM_000249.3(MLH1):c.2059C>T (p.Arg687Trp) MLH1 May 16, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0009405,Orphanet:ORPHA443090;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:C1333991,OMIM:609310;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Hereditary nonpolyposis colon cancer;Lynch syndrome;Lynch syndrome II;not provided germline;unknown 3 37048973 AGTAAAGAATGCGCTATGTTCTATTCCATCCGGAAGCAGTACATATCTGAGGAGTCGACCC 61750120 98774 NM_000350.2(ABCA4):c.3322C>T (p.Arg1108Cys) ABCA4 Mar 28, 2016 MeSH:C535804,MedGen:C1855465,OMIM:248200;MedGen:CN517202 Stargardt disease 1;not provided germline 1 94042767 CGCTCAATCTGGGATCTGCTCCTGAAGTATCGCTCAGGTAACAGCTGCTGCTCAGTCTCCT -1 443828 NM_002890.2(RASA1):c.2125C>T (p.Arg709Ter) RASA1 Sep 22, 2017 MedGen:CN517202 not provided germline 5 87376506 AAAGGTATTGAACCAGGGTCCCTGCGTGTTCGAGCACGATACTCTATGGAAAAAATCATGC 587777209 108164 NM_000541.4(SAG):c.523C>T (p.Arg175Ter) SAG Jul 01, 2004 MedGen:C1306122,OMIM:258100,SNOMED CT:193687000 Oguchi's disease germline 2 233328488 TCTGTGGCTGTTTCCCACAGGAGCTCCGTGCGATTACTGATCCGCAAAGTACAGCATGCCC 587784026 168498 NM_133433.3(NIPBL):c.6952C>T (p.Gln2318Ter) NIPBL Feb 08, 2013 MedGen:CN029798,OMIM:122470 Cornelia de Lange syndrome 1 germline 5 37049299 ACTCTAAATCAAGGTCTTATTCATCCAGTTCAGGTAAGCATGTTTTATGGCAGCAGCACTT 886041319 264092 NM_181457.3(PAX3):c.784C>T (p.Arg262Ter) PAX3 Sep 02, 2016 MedGen:CN517202 not provided germline 2 222232086 CTGGCCCAGAGGGCGAAGCTCACCGAGGCCCGAGTACAGGTACTGTTGCCCAAACCTCCGT 387906746 39012 NM_024408.3(NOTCH2):c.6622C>T (p.Gln2208Ter) NOTCH2 Mar 06, 2011 MedGen:C0917715,OMIM:102500,SNOMED CT:63122002 Hajdu-Cheney syndrome germline 1 119916100 GCACTATCTTTTTCTAACCTTCATGAAATGCAGCCTTTGGCACATGGGGCCAGCACTGTGC 377429225 454408 NM_005732.3(RAD50):c.676C>T (p.Gln226Ter) RAD50 Mar 08, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 5 132579986 TATAAGGAAAAAGCTTGTGAGATTCGTGATCAGATTACAAGTAAGGAAGCCCAGTTAACAT 201157731 211608 NM_021957.3(GYS2):c.547C>T (p.Gln183Ter) GYS2 Jul 16, 2014 MedGen:CN517202 not provided germline 12 21574275 AAATATGTCGTTGCCCAATTCCATGAATGGCAGGCTGGAATTGGACTGATCCTTTCTCGAG 199473168 78639 NM_198056.2(SCN5A):c.2632C>T (p.Arg878Cys) SCN5A Jun 23, 2015 MedGen:C1142166,Orphanet:ORPHA130,SNOMED CT:418818005;MedGen:CN517202 Brugada syndrome;not provided germline 3 38585846 CTGAGGGACAGCGACTCAGGCCTGCTGCCTCGCTGGCACATGATGGACTTCTTTCATGCCT 121918293 17756 NM_017671.4(FERMT1):c.811C>T (p.Arg271Ter) FERMT1 Jan 07, 2016 MedGen:C0406557,OMIM:173650,SNOMED CT:238835001,SNOMED CT:238836000 Kindler's syndrome germline 20 6107570 GGCATCCAAGAGGATGAGCAGCTGCTCTTACGATTTAAATATTATTCTTTCTTCGACTTGA 80358838 66658 NM_000059.3(BRCA2):c.6025C>T (p.Gln2009Ter) BRCA2 Feb 14, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome germline 13 32340380 GTGTTTTCTGAAATAGAAGATAGTACCAAGCAAGTCTTTTCCAAAGTATTGTTTAAAAGTA 121913619 29179 NM_002470.3(MYH3):c.533C>T (p.Thr178Ile) MYH3 Mar 06, 2009 MedGen:C1834523,OMIM:601680,Orphanet:ORPHA1147;MedGen:C0265224,OMIM:193700,SNOMED CT:52616002 Distal arthrogryposis type 2B;Freeman-Sheldon syndrome germline 17 10650374 CAGATCGTGAAAACCAGTCCATTCTGATCACGTAAGTATCCATGGCATAGAGTGGTTTCAT 1085307357 414312 NM_001204.6(BMPR2):c.1456C>T (p.Q486*) BMPR2 - MedGen:C0152171,OMIM:178600,SNOMED CT:26174007 Primary pulmonary hypertension germline 2 202552758 CTCAAGGAGACAATCGAAGACTGTTGGGACCAGGATGCAGAGGCTCGGCTTACTGCACAGT 267607258 46918 NM_002437.4(MPV17):c.293C>T (p.Pro98Leu) MPV17 May 31, 2017 MedGen:CN239328;MedGen:C1850406,OMIM:256810,Orphanet:ORPHA255229;MedGen:CN517202 MPV17-Related Disorders;Navajo neurohepatopathy;not provided germline 2 27312576 TAATTTCTCTTCCCTAGGGGGGCTTTGCCCCGTGTTTTCTAGGCTGCTTTCTCCCACTGGT 1060503015 403820 NM_003073.4(SMARCB1):c.118C>T (p.Arg40Ter) SMARCB1 Jun 19, 2017 MedGen:C1836327,OMIM:609322 Rhabdoid tumor predisposition syndrome 1 germline 22 23791780 TCATAGGTGGGAAACTACCTCCGTATGTTCCGAGGTTCTCTGTACAAGAGATACCCCTCAC 121434272 18643 NM_001126128.1(PROK2):c.217C>T (p.Arg73Cys) PROK2 Sep 01, 2008 MedGen:C1857720,OMIM:610628 Kallmann syndrome 4 germline 3 71781472 AAACTGGGAGACAGCTGCCATCCACTGACTCGTAAAGTTAGTATATATATATTTGTATTCA 121913302 132347 NM_000321.2(RB1):c.1363C>T (p.Arg455Ter) RB1 May 16, 2017 MedGen:C0027672,SNOMED CT:699346009;Human Phenotype Ontology:HP:0009919,MeSH:D012175,MedGen:C0035335,OMIM:180200,Orphanet:ORPHA790;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Retinoblastoma;not provided germline;somatic 13 48379624 CGATACAAACTTGGAGTTCGCTTGTATTACCGAGTAATGGAATCCATGCTTAAATCAGTAA 797045142 205532 NM_000494.3(COL17A1):c.2816C>T (p.Thr939Ile) COL17A1 Apr 01, 2015 MedGen:C1852551,OMIM:122400,Orphanet:ORPHA293381 Epithelial recurrent erosion dystrophy germline 10 104039613 CAGGCGAGCAAGGCCTCCCAGGTTTCTCAACCTCAGGTAAGGGCTGAACCCCGCCCCATTC 368949613 39837 NM_014049.4(ACAD9):c.1249C>T (p.Arg417Cys) ACAD9 Aug 25, 2015 MedGen:C1970173,OMIM:611126,Orphanet:ORPHA99901;MedGen:C1970173,OMIM:611126,Orphanet:ORPHA99901 Acyl-CoA dehydrogenase family, member 9, deficiency of;Acyl-CoA dehydrogenase family, member 9, deficiency of germline 3 128906220 ACAAGGGACTATCCGTACGAGCGCATACTGCGTGACACCCGCATCCTCCTCATCTTCGAGG 121434222 18080 NM_000051.3(ATM):c.4081C>T (p.Gln1361Ter) ATM Aug 04, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0334634 Ataxia-telangiectasia syndrome;Mantle cell lymphoma germline;somatic 11 108287687 TTACATGAGCCAGCAAATTCTAGTGCCAGTCAGAGCACTGACCTCTGTGACTTTTCAGGGT 377022708 39841 NM_014049.4(ACAD9):c.1594C>T (p.Arg532Trp) ACAD9 Mar 04, 2016 MedGen:C1970173,OMIM:611126,Orphanet:ORPHA99901;MedGen:C1970173,OMIM:611126,Orphanet:ORPHA99901;MedGen:CN517202 Acyl-CoA dehydrogenase family, member 9, deficiency of;Acyl-CoA dehydrogenase family, member 9, deficiency of;not provided germline 3 128910051 ACCATCATGGAGGAGCAGCTGGTACTGAAGCGGGTGGCCAACATCCTCATCAACCTGTATG 886040995 262660 NM_017780.3(CHD7):c.6079C>T (p.Arg2027Ter) CHD7 Oct 27, 2017 MedGen:C0265354,OMIM:214800,Orphanet:ORPHA138,SNOMED CT:47535005;MedGen:CN517202 CHARGE association;not provided de novo;germline 8 60852682 TGTTTTGTGGCCATGTGTAGGCGAGTATGTCGAATGCCCGTCAAGCCAGATGATGGTAGGT 374304304 98270 NM_000048.3(ASL):c.280C>T (p.Arg94Cys) ASL Mar 24, 2015 MedGen:C0268547,OMIM:207900,Orphanet:ORPHA23,SNOMED CT:41013004 Argininosuccinate lyase deficiency germline 7 66082440 AATGATGAGGACATCCACACAGCCAATGAGCGCCGCCTGAAGGTACGACCCCTGGAGCCCC 121912503 29489 NM_005577.2(LPA):c.109C>T (p.Arg37Ter) LPA Dec 01, 2004 MedGen:C1835362 Lipoprotein(a) deficiency, congenital germline 6 160650438 GATTGCTACCATGGTGATGGACAGAGTTATCGAGGCACGTACTCCACCACTGTCACAGGAA 201025290 226733 NM_003331.4(TYK2):c.1912C>T (p.Arg638Ter) TYK2 Apr 01, 2016 MedGen:C1969086,OMIM:611521,Orphanet:ORPHA331226 Tyrosine kinase 2 deficiency germline 19 10361817 GTGCCTGGCAGGGACCGTGGGCAGGAGCTACGAGTGGTGCTCAAAGTGCTGGACCCTAGTC 768638173 186247 NM_000267.3(NF1):c.2041C>T (p.Arg681Ter) NF1 Nov 28, 2017 Human Phenotype Ontology:HP:0000997,MedGen:C1860335;Human Phenotype Ontology:HP:0000957,MedGen:C0221263;MedGen:C0027672,SNOMED CT:699346009;MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003;Human Phenotype Ontology:HP:0009734,MedGen:C0346326;MedGen:CN517202 Axillary freckling;Cafe-au-lait spot;Hereditary cancer-predisposing syndrome;Neurofibromatosis, type 1;Optic glioma;not provided germline;unknown 17 31226474 GCAGGATGCAGCGGAACCCCCCCGATTTGCCGACAAGCCCAGACCAAACTAGAAGTGGCCC 199422148 34414 NM_018136.4(ASPM):c.1990C>T (p.Gln664Ter) ASPM Sep 01, 2009 MedGen:C1837501,OMIM:608716 Primary autosomal recessive microcephaly 5 not provided 1 197139803 AAAAGGACAAAACCCATTATCGCTGTGGCACAGTCCAGTTTGACCTTCATAAAACCATTAA 3026906 24172 NM_001113348.1(ECE1):c.2212C>T (p.Arg738Cys) ECE1 Jan 01, 1999 MedGen:C3151237,OMIM:613870 Hirschsprung disease, cardiac defects, and autonomic dysfunction germline 1 21220008 TCCAATTCCAAGGAGTTCTCAGAACACTTCCGCTGCCCACCTGGCTCACCCATGAACCCGC 137853148 20507 NM_006207.2(PDGFRL):c.67C>T (p.His23Tyr) PDGFRL Mar 02, 1995 MedGen:C0699790,OMIM:114500,SNOMED CT:269533000 Carcinoma of colon somatic 8 17589479 CTCTCCTTACGTTTTGCAGTTACTGGCCAACACCTTCCCAAGAACAAGCGTCCAAAAGAAC 199476196 47880 NM_207352.3(CYP4V2):c.974C>T (p.Thr325Ile) CYP4V2 Apr 12, 2012 MedGen:C1859486,OMIM:210370,Orphanet:ORPHA41751 Bietti crystalline corneoretinal dystrophy not provided 4 186201329 GTCATGAAGATATTCGAGAAGAAGTTGACACCTTCATGTTTGAGGTATTGTATATTGTTAG 121909204 22920 NM_000350.2(ABCA4):c.3083C>T (p.Ala1028Val) ABCA4 Dec 29, 2016 MeSH:C535804,MedGen:C1855465,OMIM:248200 Stargardt disease 1 germline 1 94043443 TCACGGTGGCTGAGCACATGCTGTTCTATGCCCAGCTGAAAGGAAAGTCCCAGGAGGAGGC 193186112 193447 NM_000642.2(AGL):c.256C>T (p.Gln86Ter) AGL Aug 25, 2017 MedGen:C1968739;MedGen:C0017922,OMIM:232400,Orphanet:ORPHA308684,SNOMED CT:66937008 Glycogen storage disease IIIa;Glycogen storage disease type III germline 1 99861676 GATTCTGATAAATACTGTAAACTTAATCTGCAACAATCTGGTTCATTTCAGTATTATTTCC 794727215 192058 NM_032682.5(FOXP1):c.1624C>T (p.Gln542Ter) FOXP1 Nov 10, 2014 MedGen:C3150923,OMIM:613670 Mental retardation with language impairment and with or without autistic features germline 3 70972583 GCAGTATGGACAGTGGATGAAGTAGAATTCCAAAAACGAAGGCCACAAAAGATCAGTGGGT 1060505036 404673 NM_001690.3(ATP6V1A):c.1012C>T (p.Arg338Cys) ATP6V1A Mar 27, 2017 MedGen:CN241828,OMIM:617403 CUTIS LAXA, AUTOSOMAL RECESSIVE, TYPE IID germline 3 113794895 AATTTAGGAATCACACTGTCAGAGTACTTCCGTGACATGGGCTATCATGTCAGTATGATGG 886041154 264107 NM_000388.3(CASR):c.164C>T (p.Pro55Leu) CASR Mar 02, 2016 MedGen:CN517202 not provided germline 3 122254353 CAGCTAAAGATCAAGATCTCAAATCAAGGCCGGAGTCTGTGGAATGTATCAGGTAAGAAGA 786205009 187411 NM_005249.4(FOXG1):c.730C>T (p.Arg244Cys) FOXG1 Mar 29, 2011 MedGen:C3150705,OMIM:613454 Rett syndrome, congenital variant de novo 14 28768009 TCCCTCAACAAGTGCTTCGTGAAGGTGCCGCGCCACTACGACGACCCGGGCAAGGGCAACT 80356704 33892 NM_000083.2(CLCN1):c.1592C>T (p.Ala531Val) CLCN1 Apr 12, 2011 MedGen:C0027127,Orphanet:ORPHA206973 Myotonia congenita not provided 7 143341938 CGTATTCCTGTGTCATTCTAGGAGCAGCAGCGCTGACTGGTGCCGTTTCCCACACAGTCTC 121918334 16814 NM_001191061.1(SLC25A22):c.617C>T (p.Pro206Leu) SLC25A22 Feb 01, 2005 MedGen:C0270855,OMIM:609304,Orphanet:ORPHA1935,SNOMED CT:44423001 Early myoclonic encephalopathy germline 11 792429 GGGATGTCCCCTTCTCTGTGGTGTACTTCCCGCTCTTTGCCAACCTGAACCAGCTGGGCCG 780697796 431671 NM_001145849.1(PROM1):c.436C>T (p.Arg146Ter) PROM1 Jan 01, 2015 Human Phenotype Ontology:HP:0000556,MedGen:C0854723,Orphanet:ORPHA71862,SNOMED CT:314407005 Retinal dystrophy unknown 4 16033377 TGTAACAAATGTGGTGGAGAAATGCACCAGCGACAGAAGGAAAATGGGCCCTTCCTGAGGA 777181377 263975 NM_002016.1(FLG):c.2218C>T (p.Arg740Ter) FLG Jul 20, 2016 MedGen:CN517202 not provided germline 1 152312668 GCTTCATCTGCAGTCAGAGACAGTGGACACCGAGGGTCCAGTGGTAGTCAGGCCACTGACA 141156009 39772 NM_203290.3(POLR1C):c.835C>T (p.Arg279Trp) POLR1C Dec 27, 2016 MedGen:C1855433,OMIM:248390;MedGen:CN517202 Mandibulofacial dysostosis, Treacher Collins type, autosomal recessive;not provided germline 6 43520961 GGTAAAAAGGTGGCCAGAGTTGCCAACCCCCGGCTGGATACCTTCAGCAGAGAAATCTTCC 879255249 178826 NM_004793.3(LONP1):c.2171C>T (p.Ala724Val) LONP1 Jan 08, 2015 MedGen:C1838180,OMIM:600373,Orphanet:ORPHA1458 CODAS syndrome germline 19 5694536 CCCTGACCGCCCAGGTGTTACGGAAATCGGCCTACAAGATTGTCAGCGGCGAGGCCGAGTC 145449046 68151 NM_000492.3(CFTR):c.2374C>T (p.Arg792Ter) CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline 7 117592541 AACATTCACCGAAAGACAACAGCATCCACACGAAAAGTGTCACTGGCCCCTCAGGCAAACT 61759860 24309 NM_001038.5(SCNN1A):c.241C>T (p.Arg81Cys) SCNN1A Jul 01, 2009 MedGen:C2751666,OMIM:613021 Bronchiectasis with or without elevated sweat chloride 2 germline 12 6374543 GCCATCCGCCTGGTGTGCTCCCAGCACAACCGCATGAAGACGGCCTTCTGGGCAGTGCTGT 587783410 169018 NM_018451.4(CENPJ):c.3448C>T (p.Gln1150Ter) CENPJ Jun 07, 2013 MedGen:C1842109,OMIM:608393 Primary autosomal recessive microcephaly 6 germline 13 24885305 TATAAAGAGGAGGAGGAAGACCAAGACATACAGGGAGAAATCAGTCATCCTGATGGAAAGG 1135402914 425263 NM_000574.4(CD55):c.596C>T (p.Ser199Leu) CD55 Sep 01, 2017 na CROMER BLOOD GROUP SYSTEM, Dr(a-) PHENOTYPE germline 1 207326769 CCTGTTGCTTTAGGTACAAATTATTTGGCTCGACTTCTAGTTTTTGTCTTATTTCAGGCAG 764042910 434237 NM_000527.4(LDLR):c.643C>T (p.Arg215Cys) LDLR - MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11105549 CTAAGTGGCGAGTGCATCCACTCCAGCTGGCGCTGTGATGGTGGCCCCGACTGCAAGGACA 137854542 15418 NM_000308.3(CTSA):c.323C>T (p.Ser108Leu) CTSA Jun 01, 1993 MedGen:C0268233,OMIM:256540,Orphanet:ORPHA351,SNOMED CT:35691006 Combined deficiency of sialidase AND beta galactosidase germline 20 45891990 TTTGGCTCAATGGGGGTCCCGGCTGCAGCTCACTAGATGGGCTCCTCACAGAGCATGGCCC 749439750 214328 NM_025114.3(CEP290):c.4522C>T (p.Arg1508Ter) CEP290 Oct 13, 2017 MedGen:C1857780,OMIM:610188;MedGen:CN517202 Joubert syndrome 5;not provided germline;unknown 12 88084768 AGAGACAAAGTAATCAATGAACTGAGGCTTCGATTGCCTGCCACTGCAGAAAGAGAAAAGC 267606858 20993 NM_004130.3(GYG1):c.248C>T (p.Thr83Met) GYG1 Apr 01, 2012 MedGen:C3150754,OMIM:613507,Orphanet:ORPHA263297 Glycogen storage disease XV germline 3 148996406 CCTTAATGAAGAGGCCAGAGTTGGGTGTCACGCTGACAAAGCTCCACTGCTGGTCGCTTAC 749099493 265491 NM_000070.2(CAPN3):c.1063C>T (p.Arg355Trp) CAPN3 Sep 16, 2016 MedGen:C1869123,OMIM:253600,Orphanet:ORPHA267 Limb-girdle muscular dystrophy, type 2A germline 15 42394289 CCGTTCAAAGGTGAGAAAGTGAAGCTGGTGCGGCTGCGGAATCCGTGGGGCCAGGTGGAGT 121912725 32965 NM_000039.2(APOA1):c.166C>T (p.Gln56Ter) APOA1 Dec 01, 1994 MedGen:C4015841 Xanthelasmas, periorbital germline 11 116837035 CTCAAAGACAGCGGCAGAGACTATGTGTCCCAGTTTGAAGGCTCCGCCTTGGGAAAACAGC -1 443927 NM_020732.3(ARID1B):c.5722C>T (p.Gln1908Ter) ARID1B Sep 25, 2017 MedGen:CN517202 not provided germline 6 157206863 ACCGAAAGCAGTAAGTTTCCCTTTGGTATCCAGCAAGCCAAAAGTCACCGGAACATCAAGC 128624225 26349 NM_000033.3(ABCD1):c.1817C>T (p.Ser606Leu) ABCD1 Jul 24, 2017 MedGen:C1868690,OMIM:240200;MedGen:C0162309,OMIM:300100,Orphanet:ORPHA43,SNOMED CT:65389002;MedGen:CN517202 Addison's disease;Adrenoleukodystrophy;not provided germline X 153743023 AGGCTATGTGTGACTGGAAGGACGTCCTGTCGGGTGGCGAGAAGCAGAGAATCGGCATGGC 397514670 49898 NM_006772.2(SYNGAP1):c.1685C>T (p.Pro562Leu) SYNGAP1 Aug 09, 2016 MedGen:C2675473,OMIM:612621;MedGen:CN517202 Mental retardation, autosomal dominant 5;not provided germline 6 33440737 TCTCCCCGACCCTTCCCCCCAGCGTGTTCCCGAGGGAGCTGAAGGAGGTGTTTGCTTCGTG 140511594 39892 NM_024753.4(TTC21B):c.626C>T (p.Pro209Leu) TTC21B Jun 26, 2017 MedGen:C3151186,OMIM:613820 Nephronophthisis 12 germline 2 165941111 AGACTGTGAACCAGATAATCGTGAATTTTCCGAGCTTCCTTCCTGCTTTTGTTAAGAAAAT 387907055 39878 NM_152722.4(HEPACAM):c.274C>T (p.Arg92Trp) HEPACAM Nov 03, 2011 MedGen:C3151355,OMIM:613925;MedGen:C3151356,OMIM:613926 Megalencephalic leukoencephalopathy with subcortical cysts 2a;Megalencephalic leukoencephalopathy with subcortical cysts 2b, remitting, with or without mental retardation germline 11 124924881 TCCATTGGCACAGAGGTCATCGGCACCCTGCGGCCTGACTATCGAGACCGTATCCGACTCT 72650700 39295 NM_001171.5(ABCC6):c.1552C>T (p.Arg518Ter) ABCC6 May 08, 2017 MedGen:C3276161,OMIM:614473;MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005;MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005;MedGen:C1867450,OMIM:177850;MedGen:CN517202 Generalized arterial calcification of infancy 2;Pseudoxanthoma elasticum;Pseudoxanthoma elasticum;Pseudoxanthoma elasticum, forme fruste;not provided germline;paternal;unknown 16 16190247 GGAGCCTTTCTGGACAGAGTCCTGGGCATCCGAGGCCAGGAGCTGGGCGCCTTGCGGACCT 137854580 15863 NM_000038.5(APC):c.1495C>T (p.Arg499Ter) APC Oct 02, 2017 MedGen:CN240755;MedGen:C2713442,OMIM:175100;MedGen:C0017097,Orphanet:ORPHA79665,SNOMED CT:60876000;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Familial adenomatous polyposis;Familial adenomatous polyposis 1;Gardner syndrome;Hereditary cancer-predisposing syndrome;not provided germline;unknown 5 112827194 ACTAATGACCACTACAGTATTACACTAAGACGATATGCTGGAATGGCTTTGACAAACTTGA 104894003 33314 NM_001101.4(ACTB):c.547C>T (p.Arg183Trp) ACTB Sep 27, 2016 MedGen:C1855722,OMIM:243310,OMIM:608578,Orphanet:ORPHA2995;MedGen:C1846331,OMIM:607371,Orphanet:ORPHA79107 Baraitser-Winter syndrome 1;Juvenile-onset dystonia germline 7 5528536 CATGCCATCCTGCGTCTGGACCTGGCTGGCCGGGACCTGACTGACTACCTCATGAAGATCC 137852967 19595 NM_153638.3(PANK2):c.1583C>T (p.Thr528Met) PANK2 Jan 02, 2003 MedGen:C1846582,OMIM:607236;MedGen:C2751506;MedGen:C0018523,OMIM:234200,Orphanet:ORPHA157850,SNOMED CT:2992000 Hypoprebetalipoproteinemia, acanthocytosis, retinitis pigmentosa, and pallidal degeneration;Neurodegeneration with brain iron accumulation 1, atypical;Pigmentary pallidal degeneration germline;inherited 20 3918717 TATTTGTTGGAAATTTCTTGAGAATTAATACGATCGCCATGCGGCTTTTGGCATATGCTTT 137853226 30942 NM_002070.3(GNAI2):c.535C>T (p.Arg179Cys) GNAI2 Aug 10, 1990 MedGen:C4016392;MedGen:C1370419;MedGen:C2750844 Adrenocortical tumor, somatic;Granulosa cell tumor of the ovary;Thecoma, somatic somatic 3 50256262 ATCCCCACACAGCAAGATGTGCTACGGACCCGCGTAAAGACCACGGGGATCGTGGAGACAC 121918042 28560 NM_000297.3(PKD2):c.1390C>T (p.Arg464Ter) PKD2 Dec 01, 1997 MedGen:C2751306,OMIM:613095 Polycystic kidney disease 2 germline 4 88046712 TCTTGGCAATTTCAGCCTTTAAAGCTGATCCGATATGTCACAACTTTTGATTTCTTCCTGG -1 481618 NM_001256850.1(TTN):c.85774C>T (p.Arg28592Ter) TTN Oct 13, 2017 MedGen:CN517202 not provided germline 2 178552203 GGCCCACCATCAAAGCCCAAAGGACCCATTCGATTTGATGAAATCAAGGCTGATAGTGTCA 587784065 168329 NM_133433.3(NIPBL):c.922C>T (p.Arg308Ter) NIPBL Feb 08, 2013 MedGen:CN029798,OMIM:122470 Cornelia de Lange syndrome 1 germline 5 36975829 CAATCTCAGTCTCTACCTTGTTCATCACCTCGAGATGTTCCACCAGATATCTTGCTAGATT 749232831 362479 NM_001198903.1(YY1AP1):c.724C>T (p.Gln242Ter) YY1AP1 Feb 14, 2017 MedGen:C1865267,OMIM:602531,Orphanet:ORPHA79094 Grange syndrome germline 1 155676562 CTGGACCCAGCACAAAGGAAGAGACTCCAGCAGCAGATGCAGCAGGTAACACTTTCCTTGG 387906674 38801 NM_000313.3(PROS1):c.1063C>T (p.Arg355Cys) PROS1 Dec 14, 2010 MedGen:C2676728,OMIM:612336 Protein S deficiency germline 3 93893025 GATCACTCAGCGTGGCTCCTGATTGCACTTCGTGGTGGAAAGATTGAAGTTCAGCTTAAGA 398123167 98366 NM_000143.3(FH):c.760C>T (p.Gln254Ter) FH Feb 28, 2017 MedGen:C0342770,OMIM:606812,Orphanet:ORPHA24,SNOMED CT:237983002;MedGen:CN517202 Fumarase deficiency;not provided germline 1 241506147 TCTTTTCAGGAATTTAGTGGTTATGTTCAACAAGTAAAATATGCAATGACAAGAATAAAAG 794728119 197072 NM_004415.3(DSP):c.3961C>T (p.Gln1321Ter) DSP Aug 04, 2014 MedGen:CN517202 not provided germline 6 7580151 CAGTCCCTGGAGGAGGCTGCCAAGACCATTCAGGACAAAAATAAGGAGATCGAGAGACTCA 767146880 215638 NR_029621.1(MIR204):n.37C>T MIR204 Jun 23, 2015 MedGen:C4225233,OMIM:616722 Retinal dystrophy and iris coloboma with or without congenital cataract germline 9 70810048 AGTCTTTCTTCATGTGACTCGTGGACTTCCCTTTGTCATCCTATGCCTGAGAATATATGAA 121908149 19412 NM_001243133.1(NLRP3):c.1055C>T (p.Ala352Val) NLRP3 Nov 01, 2001 MedGen:C0268390,OMIM:191900,Orphanet:ORPHA575,SNOMED CT:15123008;MedGen:C0343068,OMIM:120100,Orphanet:ORPHA47045,SNOMED CT:238687000 Familial amyloid nephropathy with urticaria AND deafness;Familial cold urticaria germline 1 247424504 CCTCTCTGCTCATCACCACGAGACCTGTGGCCCTGGAGAAACTGCAGCACTTGCTGGACCA 5030819 224958 NM_000551.3(VHL):c.490C>T (p.Gln164Ter) VHL Feb 26, 2016 MedGen:C0019562,OMIM:193300,Orphanet:ORPHA892,SNOMED CT:46659004;MedGen:CN517202 Von Hippel-Lindau syndrome;not provided germline 3 10149813 CCAGTGTATACTCTGAAAGAGCGATGCCTCCAGGTTGTCCGGAGCCTAGTCAAGCCTGAGA 372770167 419006 NM_025139.5(ARMC9):c.259C>T (p.Arg87Ter) ARMC9 Aug 16, 2017 MedGen:CN262509;MedGen:CN399089,OMIM:617622 ARMC9-related Joubert syndrome;JOUBERT SYNDROME 30 germline;paternal 2 231214912 CTGTGGGAGGAGCACATTTCAAGTTCCATCCGAGATGGGGACTCCTTTGCCCAGAAGCTGG 397507409 46733 NM_000059.3(BRCA2):c.8677C>T (p.Gln2893Ter) BRCA2 Sep 08, 2016 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145;MedGen:CN517202 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome;not provided germline 13 32376714 CCATATTTACCATCACGTGCACTAACAAGACAGCAAGTTCGTGCTTTGCAAGATGGTGCAG 587783711 168964 NM_003482.3(KMT2D):c.3121C>T (p.Gln1041Ter) KMT2D Mar 13, 2015 MedGen:CN030661,OMIM:147920 Kabuki syndrome 1 germline 12 49050467 TCCCTGGTTCCCCAAAACTCCCCTCCTTCCCAGTGCTCTCCTCCTGCCCTACCACTGTCCG 104894804 26754 NM_004429.4(EFNB1):c.196C>T (p.Arg66Ter) EFNB1 Jan 30, 2015 MedGen:C0220767,OMIM:304110;MedGen:CN517202 Craniofrontonasal dysplasia;not provided germline X 68838684 ATTGGAGACAAGCTGGACATCATCTGCCCCCGAGCAGAAGCAGGGCGGCCCTATGAGTACT -1 428099 NM_006463.5(STAMBP):c.649C>T (p.Gln217Ter) STAMBP Apr 19, 2017 MedGen:C3280296,OMIM:614261,Orphanet:ORPHA294016 Microcephaly-capillary malformation syndrome germline 2 73847660 GTGTTCCCCACCTTAACAGTCTCATCCATACAGCCTTCAGACTGTCACACAACTGTAAGGC 587783005 165807 NM_000060.4(BTD):c.701C>T (p.Thr234Ile) BTD - MedGen:C0220754,OMIM:253260,Orphanet:ORPHA79241,SNOMED CT:8808004 Biotinidase deficiency germline 3 15644557 CTCTTAAAGTGGATCTCATCACCTTTGATACCCCCTTTGCTGGCAGGTTTGGCATCTTCAC -1 432017 NM_020686.5(ABAT):c.1129C>T (p.Arg377Trp) ABAT Sep 12, 2017 MedGen:C0342708,OMIM:613163,Orphanet:ORPHA2066,SNOMED CT:237941007 Gamma-aminobutyric acid transaminase deficiency germline 16 8776350 TCCAACACCCGTTCCTCATTCCAGCCCTACCGGATCTTCAACACCTGGCTGGGGGACCCGT 61750418 186754 NM_000466.2(PEX1):c.2383C>T (p.Arg795Ter) PEX1 Oct 02, 2014 MedGen:C0043459,OMIM:214100,Orphanet:ORPHA912,SNOMED CT:88469006 Zellweger syndrome germline;unknown 7 92501923 ACAGTACTTGTGGATCGAGCCATACATTCTCGACTCTCTCGTCAGAGTATATCCACCAGAG 886039561 259896 NM_000127.2(EXT1):c.535C>T (p.Gln179Ter) EXT1 Jun 12, 2017 MedGen:CN517202 not provided germline 8 118110512 CAGTATGTGCACAATTTGAGATCCAAAGTGCAGAGTCTCCACTTGTGGAACAATGGTAGGA 794728585 198010 NM_000527.4(LDLR):c.178C>T (p.Gln60Ter) LDLR - MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11100333 GCTGAGTGCCAGGATGGCTCTGATGAGTCCCAGGAGACGTGCTGTGAGTCCCCTTTGGGCA 587784245 169394 NM_000430.3(PAFAH1B1):c.1165C>T (p.His389Tyr) PAFAH1B1 Feb 08, 2013 MedGen:C1843916,OMIM:607432 Lissencephaly 1 germline 17 2681734 AATAAACCATTTCTTTTTCTTTCAGATTTCCACAAGACGGCACCCTATGTCGTCACTGGCA 587783509 169266 NM_004380.2(CREBBP):c.598C>T (p.Gln200Ter) CREBBP Feb 08, 2013 MedGen:C0035934,OMIM:180849,Orphanet:ORPHA353277,SNOMED CT:45582004 Rubinstein-Taybi syndrome germline 16 3850497 AATAGTAACTCTGGCCATAGCTTAATTAATCAGGCTTCACAAGGGCAGGCGCAAGTCATGA 794729280 199116 NM_001256850.1(TTN):c.60076C>T (p.Arg20026Ter) TTN Aug 13, 2013 MedGen:CN517202 not provided germline 2 178584552 CCAGGTGTTCCTAGTGAACCAAAGAATGCACGAGTCACCAAAGTCAACAAGGACTGTATTT 1057518203 360565 NM_003159.2(CDKL5):c.1006C>T (p.Gln336Ter) CDKL5 Nov 03, 2016 MedGen:CN517202 not provided germline X 18603930 AGAAACCAAGCCGGCAAAAGTACTGCTTTGCAGTCTCACCACAGATCTAACAGCAAGGACA 137852575 24864 NM_000044.4(AR):c.178C>T (p.Gln60Ter) AR Mar 01, 1993 MedGen:C0039585,OMIM:300068,SNOMED CT:12313004 Androgen resistance syndrome germline X 67545324 CCCGGCGCCAGTTTGCTGCTGCTGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC 137854573 15846 NM_000038.5(APC):c.1660C>T (p.Arg554Ter) APC Aug 20, 2017 MedGen:C1858438;MedGen:C2713442,OMIM:175100;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Colorectal cancer, susceptibility to;Familial adenomatous polyposis 1;Hereditary cancer-predisposing syndrome;not provided germline 5 112828889 ATTGCGAGTGTTTTGAGGAATTTGTCTTGGCGAGCAGATGTAAATAGTAAAAAGACGTTGC 121918511 28283 NM_002739.4(PRKCG):c.301C>T (p.His101Tyr) PRKCG Apr 18, 2013 MedGen:C1854369,OMIM:605361,Orphanet:ORPHA98763 Spinocerebellar ataxia 14 germline 19 53889653 CTTCTCTGCCCCCAGGACCCCCGGAACAAACACAAGTTCCGCCTGCATAGCTACAGCAGCC 11547917 228150 NM_000527.4(LDLR):c.917C>T (p.Ser306Leu) LDLR Dec 16, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11107491 GCAACATGGCTAGAGACTGCCGGGACTGGTCAGATGAACCCATCAAAGAGTGCGGTGAGTC 797044994 204990 NM_032856.3(WDR73):c.940C>T (p.Gln314Ter) WDR73 Jun 29, 2015 MedGen:C0795949,OMIM:251300 Galloway-Mowat syndrome germline 15 84643667 GATGCCACATCTTGGGATGGAACACGGAGCCAAGATGGAACACGGAGCCAAGTAGAACCTC 869320772 227471 NM_001127178.2(PIGG):c.928C>T (p.Gln310Ter) PIGG Apr 29, 2016 MedGen:C4310794,OMIM:616917 Mental retardation, autosomal recessive 53 germline 4 515999 CTAGGTGATATCCGACATCCAAAGCACGTCCAACAGACGGATGTGGCTGCGACACTGGCGA 397509392 65579 NM_001130823.2(DNMT1):c.1709C>T (p.Ala570Val) DNMT1 May 15, 2012 MedGen:C1858804,OMIM:604121 Cerebellar ataxia, deafness, and narcolepsy, autosomal dominant germline 19 10154709 GCTTCACAGAGGACTCCCTCCTGCGACACGCGCAGTTTGTGGTGGAGCAGGTGGAGAGTTA 104894883 25738 NM_000266.3(NDP):c.302C>T (p.Ser101Phe) NDP Jan 01, 1997 MedGen:C0266526,OMIM:310600,SNOMED CT:15228007 Atrophia bulborum hereditaria germline X 43949899 CCTCCTGTCACTGCTGCCGGCCCCAGACTTCCAAGCTGAAGGCACTGCGGCTGCGATGCTC -1 481822 NM_017780.3(CHD7):c.5968C>T (p.Gln1990Ter) CHD7 Dec 06, 2017 MedGen:CN517202 not provided germline 8 60852571 ACCTTTGGGGTTATTTTTGACCCTGTGAAACAGCAATTTGACTGGAACCAATTTAGAGCCT 746763506 227329 NM_001079802.1(FKTN):c.607C>T (p.Arg203Ter) FKTN May 06, 2016 MedGen:C2751052,OMIM:613152;MedGen:C0410174,OMIM:253800,Orphanet:ORPHA272,SNOMED CT:111502003;MedGen:C0410174,OMIM:253800,Orphanet:ORPHA272,SNOMED CT:111502003;MedGen:C1969040,OMIM:611588,Orphanet:ORPHA206554;MedGen:C0265221,Orphanet:ORPHA899,SNOMED CT:111504002;MedGen:CN517202 Congenital muscular dystrophy-dystroglycanopathy without mental retardation, type B4;Fukuyama congenital muscular dystrophy;Fukuyama congenital muscular dystrophy;Limb-girdle muscular dystrophy-dystroglycanopathy, type C4;Walker-Warburg congenital muscular dystrophy;not provided germline 9 105604452 GAACACATTGACAGGAAATTTGTTCCCTTCCGAAAGTTACAGTTTGGTCGTTATCCAGGAG 121912774 32697 NM_000494.3(COL17A1):c.433C>T (p.Arg145Ter) COL17A1 Aug 01, 2000 MedGen:C0268374,OMIM:226650,Orphanet:ORPHA89840,SNOMED CT:33662006 Adult junctional epidermolysis bullosa germline 10 104072062 TTCCCTTGTACAGAGAGTGAAATTCGAGTTCGACTGCAGAGTGCGTCCCCATCCACCCGAT 121909746 31142 NM_000340.1(SLC2A2):c.859C>T (p.Gln287Ter) SLC2A2 Nov 01, 2000 MedGen:C3495427,OMIM:227810,Orphanet:ORPHA2088,SNOMED CT:61598006 Fanconi-Bickel syndrome germline 3 171005389 AGAAAAGAAAGAGAAGAAGCATCGAGTGAGCAGAAAGTCTCTATAATTCAGCTCTTCACCA 189754995 171284 NM_001851.4(COL9A1):c.1519C>T (p.Arg507Ter) COL9A1 Jul 01, 2011 MedGen:C1852831,OMIM:614134 Stickler syndrome, type 4 germline 6 70255375 TTTATTTTCATACAGGGTGATCAAGGACAGCGAGGACCTCCAGGAGAAGCAGGTCCCAAAG 121907961 18947 NM_000520.5(HEXA):c.629C>T (p.Ser210Phe) HEXA Sep 01, 1991 MedGen:C0039373,OMIM:272800,Orphanet:ORPHA845,SNOMED CT:111385000 Tay-Sachs disease germline 15 72351176 TGTTCCACTGGCATCTGGTAGATGATCCTTCCTTCCCATATGAGAGCTTCACTTTTCCAGA 28937319 24433 NM_000335.4(SCN5A):c.3890C>T (p.Pro1297Leu) SCN5A Oct 01, 2003 MedGen:C0037052,Orphanet:ORPHA166282,SNOMED CT:36083008;MedGen:C1837845,OMIM:608567 Sick sinus syndrome;Sick sinus syndrome 1, autosomal recessive germline 3 38562485 CCAACACCCTGGGCTTTGCCGAGATGGGCCCCATCAAGTCACTGCGGACGCTGCGTGCACT 199474742 242675 NM_000267.3(NF1):c.3826C>T (p.Arg1276Ter) NF1 Oct 09, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Neurofibromatosis, type 1;not provided germline;unknown 17 31235728 GAATTGGCAGACTCCATGCAGACTCTCTTCCGAGGCAACAGCTTGGCCAGTAAAATAATGA 121912978 31920 NM_000498.3(CYP11B2):c.554C>T (p.Thr185Ile) CYP11B2 Jun 01, 2003 MedGen:C3463917,OMIM:610600 Corticosterone methyloxidase type 2 deficiency germline 8 142915087 AGGTGCTGCAGAACGCCCGGGGGAGCCTGACCCTGGACGTCCAGCCCAGCATCTTCCACTA -1 447702 NM_000143.3(FH):c.634C>T (p.Gln212Ter) FH May 27, 2017 MedGen:C0342770,OMIM:606812,Orphanet:ORPHA24,SNOMED CT:237983002 Fumarase deficiency germline 1 241508707 GAAGTTCATGAAGTACTGTTACCAGGACTACAGAAGTTACATGATGCTCTTGATGCAAAAT 267607448 77110 NM_000424.3(KRT5):c.1411C>T (p.Arg471Cys) KRT5 Sep 06, 2016 MedGen:CN517202 not provided germline 12 52516665 CTGGCCCTGGACGTGGAGATCGCCACTTACCGCAAGCTGCTGGAGGGCGAGGAATGCAGGT 115746363 259630 NM_002016.1(FLG):c.2476C>T (p.Arg826Ter) FLG Sep 19, 2017 MedGen:CN517202 not provided germline 1 152312410 GTAAGACAAGGATCCCACCATGAGCAGGCACGAGACAACTCCAGGCACTCAGCATCCCAAG 1085307843 415186 NM_024757.4(EHMT1):c.2950C>T (p.Gln984Ter) EHMT1 Mar 29, 2017 MedGen:CN517202 not provided germline 9 137813088 ACGCCCCTGCAGTGTGCGAGCCTCAACTCTCAGGTGTGGAGCGCTCTGCAGATGAGCAAGG 121908220 79324 NM_001127221.1(CACNA1A):c.4999C>T (p.Arg1667Trp) CACNA1A Apr 25, 2016 MedGen:C1832894,OMIM:141500 Familial hemiplegic migraine type 1 germline 19 13235685 CTGAGCTTTCTCCGCCTCTTCCGAGCTGCCCGGCTCATCAAACTTCTCCGTCAGGGTTACA 199422175 34462 NM_018136.4(ASPM):c.7894C>T (p.Gln2632Ter) ASPM Sep 01, 2009 MedGen:C1837501,OMIM:608716 Primary autosomal recessive microcephaly 5 not provided 1 197101357 CAGGAACAGCACCAGGCTGCCATTATTATTCAGAAGCATTGTAAAGCCTTTAAAATAAGGA 1131692208 424321 NM_000527.4(LDLR):c.1427C>T (p.Pro476Leu) LDLR Mar 30, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11113603 ACACCGTCATCAGCAGAGACATCCAGGCCCCCGACGGGCTGGCTGTGGACTGGATCCACAG 72556254 103080 NM_000531.5(OTC):c.395C>T (p.Ser132Phe) OTC - MedGen:CN517202 not provided unknown X 38401283 TCTTTTTCTTGGTTTGCCACAGTGTATTGTCTAGCATGGCAGATGCAGTATTGGCTCGAGT 397514263 75590 NM_005235.2(ERBB4):c.3823C>T (p.Arg1275Trp) ERBB4 Nov 07, 2013 MedGen:C3715155,OMIM:615515;MedGen:CN517202 Amyotrophic lateral sclerosis 19;not provided germline 2 211383719 AAATATTTTTATAAACAGAATGGGCGGATCCGGCCTATTGTGGCAGAGAATCCTGAATACC 587777093 102944 NM_052844.3(WDR34):c.1339C>T (p.Arg447Trp) WDR34 Feb 10, 2014 MedGen:C3810200,OMIM:615633 Short-rib thoracic dysplasia 11 with or without polydactyly germline 9 128634259 TATCTGTTTGCTGTGCGCTGGTCCCCAGTGCGGCCCTTGGTTTTTGCAGCTGCCTCTGGGA 80357123 70147 NM_007294.3(BRCA1):c.5251C>T (p.Arg1751Ter) BRCA1 Nov 01, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;Human Phenotype Ontology:HP:0100013,MeSH:D001943,MedGen:C1458155,Orphanet:ORPHA180250,SNOMED CT:126926005;MedGen:CN517202 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;Neoplasm of the breast;not provided germline;unknown 17 43057078 GTCAATGGAAGAAACCACCAAGGTCCAAAGCGAGCAAGAGAATCCCAGGACAGAAAGGTAA 141571609 170079 NM_015922.2(NSDHL):c.757C>T (p.Gln253Ter) NSDHL Mar 31, 2014 MedGen:C0265267,OMIM:308050,Orphanet:ORPHA139,SNOMED CT:17608003 Child syndrome germline X 152867641 GTGGTCCATGGACACATCCTGGCGGCAGAGCAGCTCTCCCGAGACTCGACACTGGGTGGGA 122460158 26539 NM_003159.2(CDKL5):c.2500C>T (p.Gln834Ter) CDKL5 Mar 13, 2014 MedGen:C2748910,Orphanet:ORPHA3095;MedGen:C1839333,OMIM:300672 Atypical Rett syndrome;Early infantile epileptic encephalopathy 2 de novo;germline X 18628374 TGTGTGCATTCTCATCCTTTCTTTCAGAGCCAGCCATTAAAATCACTGCGCAAGTTGTTAC 121909195 22968 NM_000503.5(EYA1):c.922C>T (p.Arg308Ter) EYA1 Sep 17, 2011 MedGen:C0265234,OMIM:113650,Orphanet:ORPHA107,SNOMED CT:290006 Melnick-Fraser syndrome germline 8 71271802 GGTTCAGATGGGAAATCACGTGGACGGGGCCGAAGAAACAATAATCCTTCACCTCCCCCAG 759174628 230401 NM_173591.3(OTOGL):c.4987C>T (p.Arg1663Ter) OTOGL Jul 30, 2015 MedGen:CN043648,Orphanet:ORPHA87884 Nonsyndromic hearing loss and deafness germline 12 80339228 ACAGGAATCATAGACATTCATTTTGGCTTCCGATTTAACTTGTCATCCTACACAGAAGGAC 121908358 19903 NM_023067.3(FOXL2):c.295C>T (p.Gln99Ter) FOXL2 Jul 01, 2008 MedGen:C2931135 Blepharophimosis, ptosis, and epicanthus inversus syndrome type 1 germline 3 138946428 CCGTTCTACGAGAAGAATAAGAAGGGCTGGCAAAATAGCATCCGCCACAACCTCAGCCTCA -1 471030 NM_000268.3(NF2):c.586C>T (p.Arg196Ter) NF2 Feb 03, 2017 MedGen:C0027832,OMIM:101000,Orphanet:ORPHA637,SNOMED CT:92503002 Neurofibromatosis, type 2 germline 22 29655663 GAGAGAATTACTGCTTGGTACGCAGAGCACCGAGGCCGAGCCAGGTGAGGCCCATTCATTG 761622153 359652 NM_001369.2(DNAH5):c.5503C>T (p.Gln1835Ter) DNAH5 May 02, 2017 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244;MedGen:CN517202 Ciliary dyskinesia;not provided germline 5 13841112 TATTTCCATAAGGTTGGATTATTAGGAATTCAGATGATATGGACACGGGATTCAGAAGAAG 121909246 23183 NM_138712.3(PPARG):c.496C>T (p.Arg166Trp) PPARG May 01, 2007 MedGen:C1720861,OMIM:604367,Orphanet:ORPHA79083 Familial partial lipodystrophy 3 germline 3 12392713 AAAAAAAGTAGAAATAAATGTCAGTACTGTCGGTTTCAGAAATGCCTTGCAGTGGGGATGT -1 433111 NM_000020.2(ACVRL1):c.914C>T (p.Ser305Phe) ACVRL1 Oct 31, 2016 MedGen:CN169374 not specified germline 12 51915366 AGCCCCATCTGGCTCTGAGGCTAGCTGTGTCCGCGGCATGCGGCCTGGCGCACCTGCACGT 121912723 32961 NM_000039.2(APOA1):c.322C>T (p.Gln108Ter) APOA1 Apr 01, 1991 MedGen:C0342898 Apolipoprotein A-I deficiency germline 11 116836290 AACCTGGAAAAGGAGACAGAGGGCCTGAGGCAGGAGATGAGCAAGGATCTGGAGGAGGTGA 199839578 357436 NM_138694.3(PKHD1):c.11314C>T (p.Arg3772Ter) PKHD1 May 29, 2017 MedGen:C0085548,OMIM:263200,Orphanet:ORPHA731,SNOMED CT:28770003 Autosomal recessive polycystic kidney disease germline;unknown 6 51648115 CCTCCCTCCTCCTATTCCCATTTCTAGAATCGAAGAGTAGAGTCCCTGGGACCTCCTTCAG 121918199 16109 NM_001127897.3(RPGRIP1L):c.757C>T (p.Gln253Ter) RPGRIP1L Jul 01, 2007 MedGen:C1969053,OMIM:611560 Joubert syndrome 7 germline 16 53686452 ATTGAGTTATCTCTTCTTCAGCTTCGAGAACAGCAAGCTACAGATCAAAGGTATGTTAAAA 797044992 204986 NM_032856.3(WDR73):c.703C>T (p.Gln235Ter) WDR73 Jun 01, 2015 MedGen:C0795949,OMIM:251300 Galloway-Mowat syndrome germline 15 84645651 AGATGGTGTGCTGAAGTTGGGAGCTGGGGCCAGGGCCCTGGGCCCAGCATTGCCAGCCTTG 864321630 216919 NM_004606.4(TAF1):c.1786C>T (p.Pro596Ser) TAF1 Mar 16, 2017 MedGen:C4225418,OMIM:300966;MedGen:CN517202 Mental retardation, X-linked, syndromic 33;not provided germline X 71382821 TGGAATCTCTCCAATGATGAGTATTATTATCCCAAGCAACAGGGTCTTCGAGGCACCTTTG 397518480 94337 NM_005765.2(ATP6AP2):c.345C>T (p.Ser115=) ATP6AP2 Aug 15, 2013 MedGen:C3806722,OMIM:300911,Orphanet:ORPHA363654 Parkinsonism with spasticity, X-linked germline X 40597293 TCTTGACAGTGTTGCAAATTCCATTCACTCCTTATTTTCTGAGGAAACTCCTGTTGTTTTG 748555510 213228 NM_003119.3(SPG7):c.1408C>T (p.Arg470Ter) SPG7 Mar 04, 2015 MedGen:C1846564,OMIM:607259,Orphanet:ORPHA99013 Spastic paraplegia 7 germline 16 89544731 ATTTTGGACGGTGCTCTGATGAGGCCAGGCCGACTGGACCGGCACGTCTTCATTGATCTCC -1 425695 NM_080680.2(COL11A2):c.190C>T (p.Arg64Ter) COL11A2 Jun 15, 2017 MedGen:CN517202 not provided germline 6 33189362 TGTCCAGCTGATGTGGCCTACCGAGTGGCACGACCTGCCCAGCTCAGTGCACCCACTCGCC 121964964 15158 NM_000071.2(CBS):c.341C>T (p.Ala114Val) CBS Mar 01, 2017 Human Phenotype Ontology:HP:0002156,MedGen:C0019880;MedGen:C3150344,OMIM:236200;MedGen:CN068394;MedGen:CN517202 Homocystinuria;Homocystinuria due to CBS deficiency;Homocystinuria, pyridoxine-responsive;not provided germline;unknown 21 43066353 TCCCAGTGGCCAAGTGTGAGTTCTTCAACGCGGGCGGGAGCGTGAAGGACCGCATCAGCCT 587779779 133699 NM_001171155.1(PET100):c.142C>T (p.Gln48Ter) PET100 Sep 12, 2016 Human Phenotype Ontology:HP:0004902,MedGen:C4025276;MedGen:C0268237,OMIM:220110,Orphanet:ORPHA254905,SNOMED CT:67434000;MedGen:C0268237,OMIM:220110,Orphanet:ORPHA254905,SNOMED CT:67434000 Congenital lactic acidosis;Hepatic failure, early-onset, and neurologic disorder due to cytochrome C oxidase deficiency;Hepatic failure, early-onset, and neurologic disorder due to cytochrome C oxidase deficiency biparental;germline 19 7631476 CTGTCCCACCCGCTTCTCCACCCCTAGCTTCAAGAGATAGAGGAATTCAAAGAGAGGTTAC 587783458 168637 NM_017780.3(CHD7):c.7957C>T (p.Arg2653Ter) CHD7 Aug 08, 2017 MedGen:C0265354,OMIM:214800,Orphanet:ORPHA138,SNOMED CT:47535005;MedGen:CN517202 CHARGE association;not provided germline 8 60862322 GGAGAAGAAAGGGTGCCTGTTGTCAATAAACGAAATGGGAAGAAGGTAAACGCTGGGAAAG 879255236 65654 NM_018684.3(ZC4H2):c.637C>T (p.Arg213Trp) ZC4H2 May 02, 2013 MedGen:C0796200,OMIM:314580,Orphanet:ORPHA3454 Wieacker syndrome germline X 64917821 TGCCCTCTTTGCAAGGCCAAGAGTCGGTCCCGGAACCCCAAAAAGCCGAAACGGAAGCAGG 137852945 19149 NM_138694.3(PKHD1):c.9053C>T (p.Ser3018Phe) PKHD1 Mar 01, 2002 MedGen:C0085548,OMIM:263200,Orphanet:ORPHA731,SNOMED CT:28770003 Autosomal recessive polycystic kidney disease germline 6 51748563 ATGTGTCAGCAGGATCCTGGATCATATCATCTACTCTGCACCAGAGCTGTGGCGGGGGCAT 796053166 443004 NM_021007.2(SCN2A):c.5644C>T (p.Arg1882Ter) SCN2A Jul 18, 2017 MedGen:CN517202 not provided germline 2 165389450 ATGGATGCCCTTCGAATACAGATGGAAGAGCGATTCATGGCATCAAACCCCTCCAAAGTCT 180177299 200588 NM_000030.2(AGXT):c.956C>T (p.Pro319Leu) AGXT Nov 27, 2014 MedGen:C0268164,OMIM:259900,Orphanet:ORPHA93598,SNOMED CT:65520001 Primary hyperoxaluria, type I germline 2 240878035 CCAGGCCCCTCCTGCAGGCGCTCCGGCTTCCCACAGTCACCACTGTGGCTGTACCCGCTGG 111033418 57519 NM_206933.2(USH2A):c.10759C>T (p.Gln3587Ter) USH2A Nov 07, 2017 MedGen:C1848634,OMIM:276901;MedGen:CN517202 Usher syndrome, type 2A;not provided germline 1 215780023 CTACGTCTTCAGGTAGTTGCAGCTACTACCCAAGGAGTTCCGGAGAGCATCCTGCCACCAA 1057516110 353993 NM_172107.3(KCNQ2):c.1073C>T (p.Ser358Phe) KCNQ2 Mar 31, 2016 MedGen:C1852587,OMIM:121200 Benign familial neonatal seizures 1 germline 20 63433854 CCACCAACCTCTCGCGCACAGACCTGCACTCCACGTGGCAGTACTACGAGCGAACGGTCAC 121913578 29317 NM_000254.2(MTR):c.3518C>T (p.Pro1173Leu) MTR Mar 28, 2016 MeSH:D030342,MedGen:C0950123;Human Phenotype Ontology:HP:0002187,MedGen:C0020796;MedGen:C1855128,OMIM:250940,Orphanet:ORPHA2170;MedGen:CN228288;MedGen:CN517202 Inborn genetic diseases;Intellectual disability, profound;METHYLCOBALAMIN DEFICIENCY, cblG TYPE;Seizure disorder;not provided germline 1 236895470 TGCGCAGGCTGCGGTACAAGGGCATCCGCCCGGCTCCTGGCTACCCCAGCCAGCCCGACCA 202247809 46963 NM_014252.3(SLC25A15):c.847C>T (p.Leu283Phe) SLC25A15 May 31, 2012 MedGen:C0268540,OMIM:238970,Orphanet:ORPHA415,SNOMED CT:30287008 Hyperornithinemia-hyperammonemia-homocitrullinuria syndrome not provided 13 40809608 ATGATTCGAGCATTCCCTGCCAATGGAGCACTCTTTTTGGCCTACGAATATAGCAGGAAGT 754818927 248867 NM_177438.2(DICER1):c.1870C>T (p.R624*) DICER1 Aug 03, 2016 MedGen:CN072455,OMIM:601200;MedGen:C0027672,SNOMED CT:699346009 DICER1-related pleuropulmonary blastoma cancer predisposition syndrome;Hereditary cancer-predisposing syndrome germline 14 95115704 TATGTGTTGAGGCCTGACGATGGTGGTCCACGAGTCACAATCAACACGGCCATTGGACACA 369957508 360212 NM_016630.6(SPG21):c.736C>T (p.Arg246Ter) SPG21 Jun 26, 2015 MedGen:CN517202 not provided germline 15 64965394 GAAGAAATGTACAAGCTGTATCCTAATGCCCGAAGAGCTCATCTGAAAACAGGAGGCAATT 121912462 29772 NM_000213.4(ITGB4):c.1660C>T (p.Arg554Ter) ITGB4 Apr 01, 1998 MedGen:C1856934,OMIM:226730,Orphanet:ORPHA79403 Epidermolysis bullosa junctionalis with pyloric atresia germline 17 75736053 CATCTCCCTTCCTTGTCCCTCTCTGCAGACCGAGGACGCTGCTCCATGGGCCAGTGTGTGT 571919972 239728 NM_001369.2(DNAH5):c.10384C>T (p.Gln3462Ter) DNAH5 Aug 11, 2017 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244 Ciliary dyskinesia germline 5 13758881 GATGACAAGCAGGCGGAACTTGACGTGGTGCAGGCTGAGTATGAACAGGCCATGACTGAAA 554294508 404695 NM_001440.3(EXTL3):c.1382C>T (p.Pro461Leu) EXTL3 Apr 05, 2017 MedGen:CN241841,OMIM:617425 Immunoskeletal dysplasia with neurodevelopmental abnormalities germline 8 28717441 TCTTCGAAGCCCTGGAAGTCGGTGCCGTCCCGGTGGTGCTGGGGGAGCAGGTCCAGCTTCC 587784187 168261 NM_022455.4(NSD1):c.6307C>T (p.Gln2103Ter) NSD1 Feb 08, 2013 MedGen:CN035106,OMIM:117550 Sotos syndrome 1 germline 5 177292002 GAAGAAAAGTCAAAGAAATTCAAGAAGAAGCAACAGGGAAAGCGCAGGACCCAGGGTGAAA 587784397 167989 NM_006516.2(SLC2A1):c.847C>T (p.Gln283Ter) SLC2A1 Sep 17, 2014 MedGen:CN030711,OMIM:606777 GLUT1 deficiency syndrome 1 de novo;germline 1 42929613 CTCATCGCTGTGGTGCTGCAGCTGTCCCAGCAGCTGTCTGGCATCAACGCTGTGAGTGCCC 863223655 210319 NM_000214.2(JAG1):c.2230C>T (p.Arg744Ter) JAG1 Jan 04, 2017 MedGen:CN517202 not provided germline 20 10644977 GGTGGTCGTGTCTGCTCTTCTTTTATAGCCCGAAACAGTAGCTGCCTGCCCAACCCCTGCC 727504119 177026 NM_030665.3(RAI1):c.4678C>T (p.Arg1560Ter) RAI1 Aug 26, 2014 MedGen:C0795864,OMIM:182290,Orphanet:ORPHA819,SNOMED CT:401315004 Smith-Magenis syndrome germline 17 17797626 TCTTCACCCTGTAAGGGGCGTGCCAAGCGACGACGACAGCAGCAGGTGCTGCCCCTGGATC 121434493 23072 NM_005535.2(IL12RB1):c.1126C>T (p.Gln376Ter) IL12RB1 Apr 18, 2013 MedGen:C4013949,OMIM:614891,Orphanet:ORPHA319552 Immunodeficiency 30 germline 19 18069609 ACGTATTGCATTGAATGGCAGCCTGTGGGCCAGGACGGGGGCCTTGCCACCTGCAGCCTGA 797046025 207327 NM_033071.3(SYNE1):c.24865C>T (p.Gln8289Ter) SYNE1 Feb 13, 2015 MedGen:C1853116,OMIM:610743,Orphanet:ORPHA88644 Spinocerebellar ataxia, autosomal recessive 8 germline 6 152143733 GACCACAGTGCCCTAGAGTCACAGATCCGACAACTGGGCAAAGCCCTGGATGATAGCCGTT 121909117 22447 NM_006941.3(SOX10):c.470C>T (p.Ala157Val) SOX10 Apr 15, 2008 MedGen:C2750452,OMIM:613266 Waardenburg syndrome type 4C germline 22 37978094 AAAGTGACAAGCGCCCCTTCATCGAGGAGGCTGAGCGGCTCCGTATGCAGCACAAGAAAGA 1057518917 360888 NM_000083.2(CLCN1):c.2635C>T (p.Gln879Ter) CLCN1 Jan 23, 2015 Human Phenotype Ontology:HP:0002486,MedGen:C0027125 Myotonia unknown 7 143351633 GCCATTGAGGGGCACACCAAGTCTGGGGTGCAGCTCCGCCCTCCCCTTGCCAGCTTCCGGA 63750005 95592 NM_000249.3(MLH1):c.245C>T (p.Thr82Ile) MLH1 Jun 02, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Hereditary cancer-predisposing syndrome;Lynch syndrome germline 3 37000992 ATCTGGATATTGTATGTGAAAGGTTCACTACTAGTAAACTGCAGTCCTTTGAGGATTTAGC -1 482260 NM_004187.3(KDM5C):c.3058C>T (p.Gln1020Ter) KDM5C Dec 26, 2017 MedGen:CN517202 not provided germline X 53195978 GAAAACATCCCTGTTCACCTGCCCAACATCCAGGCTCTCAAGGAGGCTCTTGCTAAGGCCC 1057518166 360433 NM_003079.4(SMARCE1):c.751C>T (p.Arg251Ter) SMARCE1 Oct 21, 2016 MedGen:CN517202 not provided germline 17 40631657 CTAGAAGCTGAACTTCTTCAAATAGAGGAACGACACCAGGAGAAGAAGAGGAAATTCCTGG 74315304 23462 NM_000396.3(CTSK):c.830C>T (p.Ala277Val) CTSK May 30, 2014 MedGen:C0238402,OMIM:265800,Orphanet:ORPHA763,SNOMED CT:89647000 Pyknodysostosis germline;unknown 1 150799228 AAAGCTGCAATAGCGATAATCTGAACCATGCAGTTTTGGCAGTGGGATATGGAATCCAGAA 869312827 226412 NM_016213.4(TRIP4):c.760C>T (p.Arg254Ter) TRIP4 Aug 10, 2016 MedGen:C4225177,OMIM:616866 Spinal muscular atrophy with congenital bone fractures 1 germline 15 64406392 ACCAAGGACCTTCTTCCTCATCAAGAATTGCGAATTAAGTCTGGTCTGGAGAAGGCTATCA 193303102 178173 NM_001080413.3(NOBOX):c.907C>T (p.Arg303Ter) NOBOX Oct 01, 2011 MedGen:C1969060,OMIM:611548 Premature ovarian failure 5 germline 7 144400250 GAAGACCACTATCCTGACAGTGATAAACGCCGAGAGATTGCCCAGACGGTGGGGGTGACCC 104894596 16610 NM_000263.3(NAGLU):c.1444C>T (p.Arg482Trp) NAGLU Jan 01, 2002 MedGen:C0086648,OMIM:252920,Orphanet:ORPHA79270,SNOMED CT:59990008 Mucopolysaccharidosis, MPS-III-B germline 17 42543450 GCAGCCTGGGTGACCAGCTTTGCCGCCCGGCGGTATGGGGTCTCCCACCCGGACGCAGGGG 377443637 447105 NM_005957.4(MTHFR):c.1072C>T (p.Arg358Ter) MTHFR Jun 16, 2017 MedGen:C1856058,OMIM:236250 Homocysteinemia due to MTHFR deficiency germline 1 11794823 CCCTGGGCTCTCAGCGCCCACCCCAAGCGCCGAGAGGAAGATGTACGTCCCATCTTCTGGG 1135401805 424650 NM_006772.2(SYNGAP1):c.3190C>T (p.Gln1064Ter) SYNGAP1 Jan 06, 2017 MedGen:C2675473,OMIM:612621 Mental retardation, autosomal dominant 5 de novo 6 33443742 GGTGGGGGCAGCGGTGGGGGTGGCGGGGGCCAGCCGCCTCCATTGCAGAGGGGCAAGTCTC 778405030 235548 NM_001042492.2(NF1):c.1318C>T (p.Arg440Ter) NF1 Aug 08, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Neurofibromatosis, type 1;not provided germline 17 31206297 GATGCTGTGTATTGTCACTCGGTTGAACTTCGAAATATGTTTGGTGAAACACTTCATAAAG 121912442 29802 NM_000454.4(SOD1):c.14C>T (p.Ala5Val) SOD1 Aug 09, 2017 MedGen:C1862939,OMIM:105400;MedGen:CN517202 Amyotrophic lateral sclerosis type 1;not provided germline 21 31659783 GCGTGGCCTAGCGAGTTATGGCGACGAAGGCCGTGTGCGTGCTGAAGGGCGACGGCCCAGT 185142838 40257 NM_000124.3(ERCC6):c.3862C>T (p.Arg1288Ter) ERCC6 Dec 01, 2010 MedGen:C0220722,OMIM:214150,SNOMED CT:41283003 Cerebro-oculo-facio-skeletal syndrome germline 10 49461473 GATTATGTACTGGTGGAGGCAGAAGCCAACCGAGTGGCCCAGGATGCCCTGAAAGCACTGA 121912421 29856 NM_001025107.2(ADAR):c.535C>T (p.Arg179Ter) ADAR Sep 01, 2003 MedGen:C0406775,OMIM:127400,Orphanet:ORPHA41,SNOMED CT:239085000 Symmetrical dyschromatosis of extremities germline 1 154601222 AATAGTATCCGCGCAGCACCAGGTGAGTTTCGAGCCATCATGGAGATGCCCTCCTTCTACA 1064795638 406342 NM_004656.3(BAP1):c.1777C>T (p.Gln593Ter) BAP1 Sep 09, 2016 MedGen:CN517202 not provided germline 3 52403251 TCGCCCTCCATCAGACCAATCCAAGGCAGCCAGGGGTCCAGCAGCCCAGTGGAGAAGGAGG 121918395 32898 NM_000041.3(APOE):c.736C>T (p.Arg246Cys) APOE Mar 01, 1991 na APOE2-DUNEDIN germline 19 44909032 ATGGAGGAGATGGGCAGCCGGACCCGCGACCGCCTGGACGAGGTGAAGGAGCAGGTGGCGG 118204444 15748 NM_000512.4(GALNS):c.485C>T (p.Ser162Phe) GALNS Nov 01, 1997 MedGen:C0086651,OMIM:253000,Orphanet:ORPHA309297,SNOMED CT:7259005 Mucopolysaccharidosis, MPS-IV-A germline 16 88837703 TGAAGCACGGATTTGATGAGTGGTTTGGATCCCCCAACTGCCACTTTGGACCTTATGACAA 143038880 224699 NM_024989.3(PGAP1):c.1396C>T (p.Gln466Ter) PGAP1 Feb 25, 2016 MedGen:C4014343,OMIM:615802 Mental retardation, autosomal recessive 42 germline 2 196875776 GAATTCTTTAAAAAAGAGAAAAGATACATACAGCTTCCTGTAACTCATCTTTTTTCCTTTG -1 442112 NM_000435.2(NOTCH3):c.3091C>T (p.Arg1031Cys) NOTCH3 Aug 13, 2015 MedGen:CN517202 not provided germline 19 15180732 TATTGCCTTTGTCCCCCTGGATGGAGCGGACGCCTCTGTGACATCCGAAGCTTGCCCTGCA 104893685 21622 NM_003571.3(BFSP2):c.859C>T (p.Arg287Trp) BFSP2 Apr 01, 2000 MedGen:C3808115,OMIM:611597;MedGen:CN517202 Cataract 12, multiple types;not provided germline 3 133450432 ATTCAGTGGGAGAGAGATGTTGAAAAGAACCGGGTGGAGGCAGGAGCCCTGCTCCAAGCTA 121434519 19110 NM_015474.3(SAMHD1):c.1642C>T (p.Gln548Ter) SAMHD1 Mar 13, 2014 MedGen:C2749659,OMIM:612952 Aicardi Goutieres syndrome 5 germline 20 36897926 TCACAACTTCTGCCAGAGAAATTTGCAGAGCAGCTGATTCGAGTATATTGTAAGAAGGTGG -1 431159 NM_012160.4(FBXL4):c.1210C>T (p.Gln404Ter) FBXL4 Aug 10, 2017 MedGen:C3809592,OMIM:615471,Orphanet:ORPHA369897 Mitochondrial DNA depletion syndrome 13 (encephalomyopathic type) germline 6 98899375 GAAGTTATTTCTGAGATGTGTCCAAATCTACAGGCCTTAAATCTCTCCTCCTGTGATAAGC 137852439 25306 NM_000132.3(F8):c.5143C>T (p.Arg1715Ter) F8 Nov 01, 1993 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154928647 CAGAGCCCCCGCAGCTTTCAAAAGAAAACACGACACTATTTTATTGCTGCAGTGGAGAGGC -1 481472 NM_000346.3(SOX9):c.1372C>T (p.Gln458Ter) SOX9 Dec 11, 2017 MedGen:C1861922,OMIM:114290,Orphanet:ORPHA140,SNOMED CT:74928006 Camptomelic dysplasia maternal 17 72124229 TCCAGCTCCTACTACAGCCACGCGGCAGGCCAGGGCACCGGCCTCTACTCCACCTTCACCT 74315481 18126 NM_000487.5(ARSA):c.1232C>T (p.Thr411Ile) ARSA Aug 25, 2011 MedGen:C0023522,OMIM:250100,Orphanet:ORPHA512,SNOMED CT:396338004;MedGen:C4017847 Metachromatic leukodystrophy;Metachromatic leukodystrophy, mild germline 22 50625443 CCTCCCCAGGCTCTGCCCACAGTGATACCACTGCAGACCCTGCCTGCCACGCCTCCAGCTC 137853069 22504 NM_002241.4(KCNJ10):c.491C>T (p.Thr164Ile) KCNJ10 Nov 12, 2010 MedGen:C2748572,OMIM:612780,Orphanet:ORPHA199343 SeSAME syndrome germline 1 160042042 CCACCATCCTGGAAATCTTCATCACAGGTACCTTCCTGGCGAAGATTGCCCGGCCCAAGAA 1057517736 360624 NM_014009.3(FOXP3):c.1009C>T (p.Arg337Ter) FOXP3 Nov 09, 2016 MedGen:CN517202 not provided germline X 49253161 AACATGGACTACTTCAAGTTCCACAACATGCGACCCCCTTTCACCTACGCCACGCTCATCC 587777073 94454 NM_170606.2(KMT2C):c.4441C>T (p.Arg1481Ter) KMT2C Nov 14, 2017 MedGen:CN617858,OMIM:617768;MedGen:CN517202 KLEEFSTRA SYNDROME 2;not provided germline 7 152194506 TTGCCTCAGCCAAATGTCAATCAGAGTTCACGACCATTAAGTGAAGAACAGCTAGATGGGA 764883927 226593 NM_001283106.2(TANGO2):c.418C>T (p.Arg140Ter) TANGO2 Apr 13, 2017 MedGen:C4225171,OMIM:616878 TANGO2-Related Metabolic Encephalopathy and Arrhythmias germline 22 20055980 AAGGGAGACGTCATTTGCTACTATGGGAACCGAGGGGAGCCTGATCCTATCGTTTTGACGC 1057517655 359011 NM_006412.3(AGPAT2):c.676C>T (p.Gln226Ter) AGPAT2 Dec 08, 2016 MedGen:C1720862,OMIM:608594 Congenital generalized lipodystrophy type 1 germline 9 136673913 GTTGCTTCCCCCACAGGAACAGTCACAGTGCAGGTGCTGGAAGCCATCCCCACCAGCGGCC 587777547 150258 NM_001288953.1(TTC7A):c.727C>T (p.Gln243Ter) TTC7A Jan 02, 2014 MedGen:C0220744,OMIM:243150,Orphanet:ORPHA436252,SNOMED CT:95472001 Multiple gastrointestinal atresias germline 2 46993514 GTGCTGCGGACTGTGGAGACCAAAGCAACTCAGAACTTCAAAGTGGTAATGTGGGGTGCTG 368287711 48031 NM_001558.3(IL10RA):c.301C>T (p.Arg101Trp) IL10RA Feb 07, 2013 MedGen:C4016214 Inflammatory bowel disease 28 germline 11 117989554 TACCACAGCAATGGCTACCGGGCCAGAGTGCGGGCTGTGGACGGCAGCCGGCACTCCAACT 113993980 34181 NM_002863.4(PYGL):c.1471C>T (p.Arg491Cys) PYGL May 17, 2011 MedGen:C0017925,OMIM:232700,Orphanet:ORPHA369,SNOMED CT:237971004,SNOMED CT:29291001 Glycogen storage disease, type VI not provided 14 50914748 CAGAATAAAACCAATGGGATCACTCCAAGGCGCTGGCTCCTACTCTGCAACCCAGGACTTG 312262728 49823 NM_025137.3(SPG11):c.1492C>T (p.Gln498Ter) SPG11 Jan 31, 2013 MedGen:C1858479,OMIM:604360,Orphanet:ORPHA2822 Spastic paraplegia 11, autosomal recessive not provided 15 44648976 GGACTCTCTCTGATTTTGTTTGGTTTGACTCAAGAAGAGTTTTTAAACAGACTCATGATCC 387907093 40029 NM_017950.3(CCDC40):c.1345C>T (p.Arg449Ter) CCDC40 Jan 01, 2011 MedGen:C3151137,OMIM:613808 Ciliary dyskinesia, primary, 15 germline 17 80058885 CAGGACCTGTATGTGGACCAGCTCACCACTCGAGCCCAGCAACTGGAAGAAGACATTGCCC 128626234 26260 NM_004006.2(DMD):c.253C>T (p.Gln85Ter) DMD Jan 01, 1994 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Duchenne muscular dystrophy germline X 32844794 AACAATGTCAACAAGGCACTGCGGGTTTTGCAGAACAATAATGTAAGTAGTACCCTGGACA 587777537 150123 NM_153648.3(SLC24A4):c.245C>T (p.Ala82Val) SLC24A4 Mar 12, 2014 MedGen:C4014578,OMIM:615887 Amelogenesis imperfecta, hypomaturation type IIA5 germline 14 92442132 GCGAAGATGTGGCTGGAGCCACCTTCATGGCTGCAGGAAGCTCAACGCCAGAGCTGTTTGC 149271416 65583 NM_005006.6(NDUFS1):c.1222C>T (p.Arg408Cys) NDUFS1 Jul 01, 2016 MedGen:C1838979,OMIM:252010;MedGen:CN517202 Mitochondrial complex I deficiency;not provided germline 2 206141981 GATGTTGTTCTTCTGGTTGGTACAAACCCACGTTTTGAGGCACCACTGTTTAATGCTAGAA 886039576 259911 NM_002316.3(LMX1B):c.781C>T (p.Arg261Cys) LMX1B Apr 15, 2016 MedGen:CN517202 not provided germline 9 126693563 ACACTGGCAGCTGAGACGGGCCTCAGTGTGCGCGTGGTCCAGGTCTGGTTTCAGAACCAAA 121909069 22021 NM_170695.3(TGIF1):c.872C>T (p.Ser291Phe) TGIF1 Jun 01, 2000 MedGen:C1840528,OMIM:142946 Holoprosencephaly 4 germline 18 3457606 TAGGGAGGCCACTGTCTCCTAAGCCGTCATCCCCGGGATCAGTTTTGGCTCGTCCATCAGT 587783588 169853 NM_178151.2(DCX):c.781C>T (p.Gln261Ter) DCX Sep 02, 2014 Human Phenotype Ontology:HP:0002282,MedGen:C0008519;MedGen:C1848199,OMIM:300067,Orphanet:ORPHA2148 Heterotopia;Lissencephaly, X-linked germline X 111333078 GCCTGTGGTCCTGAAAAATTTCGCTATGCTCAGGATGATTTTTCTCTGGATGAAAATGGTA 543206298 179794 NM_000271.4(NPC1):c.2861C>T (p.Ser954Leu) NPC1 Jan 13, 2017 MedGen:C3179455,OMIM:257220;MedGen:CN517202 Niemann-Pick disease type C1;not provided germline;unknown 18 23539405 ACGATTATTTCGACTGGGTGAAGCCACAGTCGTCTTGCTGTCGAGTGGACAATATCACTGA 104893810 27551 NM_003242.5(TGFBR2):c.1582C>T (p.Arg528Cys) TGFBR2 Jan 11, 2014 MedGen:C2674876,OMIM:610168;MedGen:CN517202 Loeys-Dietz syndrome 2;not provided germline 3 30691477 ACTGAGTGCTGGGACCACGACCCAGAGGCCCGTCTCACAGCCCAGTGTGTGGCAGAACGCT 863223777 210220 NM_000192.3(TBX5):c.142C>T (p.Gln48Ter) TBX5 Mar 26, 2015 MedGen:CN517202 not provided germline 12 114403757 TCCCCGTCGTCCCCGCAGGCCGCCTTCACCCAGCAGGTAAGGAGACCTCGCGCTTCGGGTC 1064793024 406570 NM_000038.5(APC):c.5764C>T (p.Gln1922Ter) APC Oct 27, 2014 MedGen:CN517202 not provided germline 5 112841358 GCTATTGCAAAGCAGCCAATAAATCGAGGTCAGCCTAAACCCATACTTCAGAAACAATCCA 869025604 224862 NM_181705.3(LYRM7):c.214C>T (p.Gln72Ter) LYRM7 Mar 02, 2016 MedGen:C4014440,OMIM:615838 Mitochondrial complex III deficiency, nuclear type 8 germline 5 131187079 GTTGAATTATTACTCAGAACATCTGTTATACAAGGTATTCACACAGACCACAATACACTGA 779204655 237232 NM_003124.4(SPR):c.655C>T (p.Arg219Ter) SPR May 18, 2016 MedGen:CN517202 not provided germline 2 72891406 GCCCGGGAGACCTCCGTGGACCCAGACATGCGAAAAGGGCTGCAGGAGCTGAAGGCAAAGG 587783652 169294 NM_005682.6(ADGRG1):c.1426C>T (p.Arg476Ter) ADGRG1 Jan 05, 2015 MedGen:C1847352,OMIM:606854,Orphanet:ORPHA101070 Polymicrogyria, bilateral frontoparietal germline;maternal 16 57659534 GTGGCCCTGACAGGCTCTGAGGCTGGCTGCCGAGCCAGTGCCATCTTCCTGCACTTCTCCC 74315370 152477 NM_003000.2(SDHB):c.136C>T (p.Arg46Ter) SDHB Jul 19, 2017 MedGen:C1708353,Orphanet:ORPHA29072;MedGen:C0027672,SNOMED CT:699346009;MedGen:C1861848,OMIM:115310;MedGen:CN517202 Hereditary Paraganglioma-Pheochromocytoma Syndromes;Hereditary cancer-predisposing syndrome;Paragangliomas 4;not provided germline 1 17044825 GCTCCCCGTATCAAGAAATTTGCCATCTATCGATGGGACCCAGACAAGGCTGGAGACAAAC 876658461 232175 NM_003000.2(SDHB):c.640C>T (p.Gln214Ter) SDHB Apr 23, 2016 Human Phenotype Ontology:HP:0100723,MeSH:D046152,MedGen:C0238198,OMIM:606764,Orphanet:ORPHA44890;MedGen:C0027672,SNOMED CT:699346009;MedGen:C1861848,OMIM:115310;MedGen:C1861848,OMIM:115310;Human Phenotype Ontology:HP:0002666,MedGen:C0031511,OMIM:171300 Gastrointestinal stroma tumor;Hereditary cancer-predisposing syndrome;Paragangliomas 4;Paragangliomas 4;Pheochromocytoma germline;unknown 1 17023975 GACAAATATCTGGGGCCTGCAGTTCTTATGCAGGTGAGGTGCTCCTTAATTGCTTTAAGAG 121912623 18620 NM_017662.4(TRPM6):c.1420C>T (p.Arg474Ter) TRPM6 Jun 01, 2002 MedGen:C1865974,OMIM:602014,Orphanet:ORPHA30924 Hypomagnesemia 1, intestinal germline 9 74812322 GTGAACCTCCATCGCTTTCTTACCATCCCTCGACTGGAAGAGCTCTACAATACAGTGAGTA 281865066 49453 NM_000744.6(CHRNA4):c.878C>T (p.Thr293Ile) CHRNA4 Sep 20, 2012 MedGen:C1838049,OMIM:600513 Epilepsy, nocturnal frontal lobe, type 1 not provided 20 63350533 TGTCGCTCACCGTCTTCCTGCTGCTCATCACCGAGATCATCCCGTCCACCTCACTGGTCAT 770573978 378102 NM_000444.5(PHEX):c.58C>T (p.Arg20Ter) PHEX Mar 04, 2016 MedGen:C0733682,OMIM:307800,Orphanet:ORPHA89936,SNOMED CT:82236004;MedGen:CN517202 Familial X-linked hypophosphatemic vitamin D refractory rickets;not provided germline X 22033063 GAGACTGGAAAGAAGGCCAACAGAGGCACTCGAATTGCCCTGGTCGTGTTTGTCGGTGGCA 1131691792 422448 NM_000284.3(PDHA1):c.650C>T (p.Pro217Leu) PDHA1 May 22, 2017 MedGen:CN517202 not provided germline X 19355395 CTTACAACATGGCAGCTTTGTGGAAATTACCTTGTATTTTCATCTGTGAGAATAATCGCTA 121912562 23594 NM_000901.4(NR3C2):c.1609C>T (p.Arg537Ter) NR3C2 Jul 01, 1998 MedGen:C1449842,OMIM:177735,Orphanet:ORPHA171871 Pseudohypoaldosteronism type 1 autosomal dominant germline 4 148435252 ATTGGTGCTCAAGGTACAATATCTTTATCACGATCGGCTAGAGACCAATCTTTCCAACACC 281865498 47600 NM_004614.4(TK2):c.760C>T (p.Arg254Ter) TK2 Dec 06, 2012 MedGen:C3149750,OMIM:609560 Mitochondrial DNA depletion syndrome 2 not provided 16 66512006 ATGTTAGAACTCTTTGAACAAAATCGGGATCGAATATTAACTCCAGAGAATCGGAAGCATT 104886039 186843 NM_001360.2(DHCR7):c.292C>T (p.Gln98Ter) DHCR7 Apr 18, 2017 MedGen:C0175694,OMIM:270400,Orphanet:ORPHA818,SNOMED CT:43929004;MedGen:CN517202 Smith-Lemli-Opitz syndrome;not provided germline;unknown 11 71444022 AAGACTCCACCTATAACGAGGAAAGCCGCCCAGCTCTATACCTTGTGGGTCACCTTCCAGG 137852924 18422 NM_147127.4(EVC2):c.1195C>T (p.Arg399Ter) EVC2 Jan 08, 2018 MedGen:C0013903,OMIM:225500,Orphanet:ORPHA289,SNOMED CT:62501005;MedGen:CN239258;MedGen:C0024507,OMIM:263520,SNOMED CT:72922008;MedGen:CN517202 Chondroectodermal dysplasia;Ellis-van Creveld Syndrome;Short rib-polydactyly syndrome, Majewski type;not provided biparental;germline;unknown 4 5640789 AATCGGGCAGATGCAGATCTGGAGGCTTGTCGAACACAAATCAGCAAGGATATCATTGCCC 104893881 19556 NM_006005.3(WFS1):c.2455C>T (p.Gln819Ter) WFS1 Dec 01, 1998 MedGen:C0043207,OMIM:222300,Orphanet:ORPHA3463,SNOMED CT:70694009 Diabetes mellitus AND insipidus with optic atrophy AND deafness germline 4 6302250 GAGTTCAAGAGCGTGCTGCTCAGCCTGCGCCAGGGCAGCCTCATCGAGTTCAGCACCATCC 281874727 36048 NM_000495.4(COL4A5):c.4147C>T (p.Gln1383Ter) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108681837 GGAGATGCTGGTCCTCCAGGAATCCCTGGCCAGCCTGGGCTAAAGGGTCTACCAGGACCCC 869025598 224855 NM_001142864.3(PIEZO1):c.6682C>T (p.Gln2228Ter) PIEZO1 Aug 04, 2016 MedGen:C4225184,OMIM:616843 Lymphedema, hereditary, III germline 16 88716877 CTGCCCCAGCCGCTGTTCACCATGAGCGCCCAGCAGCCGTCCATCATCCCCTTCACGGCCC 200710887 440198 NM_001080463.1(DYNC2H1):c.10120C>T (p.Arg3374Cys) DYNC2H1 Jun 01, 2017 MedGen:C0265275,Orphanet:ORPHA474,SNOMED CT:75049004 Jeune thoracic dystrophy unknown 11 103253341 GACAAAATTATTGACTACAATGAAGAATTCCGCCTCTTTTTGTCAACAAGAAACCCAAATC 587784173 168246 NM_022455.4(NSD1):c.6013C>T (p.Arg2005Ter) NSD1 May 24, 2016 MedGen:CN035106,OMIM:117550;MedGen:CN517202 Sotos syndrome 1;not provided germline 5 177283790 GATGTGTAGCTTCTTTTGGAATTCTAGGACCGAATCATTGATGCTGGTCCCAAAGGAAACT 387906974 39636 NM_057179.2(TWIST2):c.193C>T (p.Gln65Ter) TWIST2 Aug 13, 2010 MedGen:C1744559,OMIM:227260,SNOMED CT:239051001 Congenital ectodermal dysplasia of face germline 2 238848408 AGCCCCAGCGCGCAGTCCTTCGAGGAGCTGCAGAGCCAGCGCATCCTGGCCAACGTGCGCG 28940888 18709 NM_000229.1(LCAT):c.1034C>T (p.Thr345Met) LCAT Feb 01, 1993 MedGen:C0023195,OMIM:245900,Orphanet:ORPHA650 Norum disease germline 16 67940193 TATACTGTCTTTACGGCGTGGGCCTGCCCACGCCCCGCACCTACATCTACGACCACGGCTT 864309483 171808 NM_183357.2(ADCY5):c.1252C>T (p.Arg418Trp) ADCY5 Jul 12, 2017 MedGen:C1847627,OMIM:606703,Orphanet:ORPHA324588;MedGen:CN517202 Dyskinesia, familial, with facial myokymia;not provided de novo;germline 3 123352464 TTCCAGGAGACCCGAGAGTGCATCCAGGCGCGGCTCCACTCGCAGCGGGAGAACCAGCAGC 193919337 19033 NM_001243766.1(POMGNT1):c.187C>T (p.Arg63Ter) POMGNT1 Sep 20, 2016 na;MedGen:C4310704,OMIM:617123 Congenital muscular dystrophy-dystroglycanopathy with brain and eye anomalies, type A3;Retinitis pigmentosa 76 germline 1 46197018 GTCAATATCAAGTTGATCCTGGACACTCGGCGAGCCATCAGTGAAGCCAATGAAGACCCAG 1131691239 421008 NM_000143.3(FH):c.757C>T (p.Gln253Ter) FH Sep 16, 2015 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 1 241506150 TTTTCTTTTCAGGAATTTAGTGGTTATGTTCAACAAGTAAAATATGCAATGACAAGAATAA 121918775 79496 NM_006920.4(SCN1A):c.2803C>T (p.Arg935Cys) SCN1A Oct 20, 2016 MedGen:C1858673,OMIM:604403;MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002;MedGen:CN517202 Generalized epilepsy with febrile seizures plus, type 2;Severe myoclonic epilepsy in infancy;not provided de novo;germline 2 166037886 GACTTCTTCCACTCCTTCCTGATTGTGTTCCGCGTGCTGTGTGGGGAGTGGATAGAGACCA 767106034 264750 NM_001271.3(CHD2):c.3214C>T (p.Arg1072Ter) CHD2 Oct 18, 2016 MedGen:CN517202 not provided germline 15 92984477 AAGGAGCTAGAAGAAATTTATATGCTGCCTCGAATTCGGAGTTCCACTAAAAAGGTGATCA 587777181 106804 NM_006702.4(PNPLA6):c.3029C>T (p.Thr1010Ile) PNPLA6 Mar 04, 2014 MedGen:C1859093,OMIM:215470,Orphanet:ORPHA1180 Boucher Neuhauser syndrome germline 19 7556502 AACCTGTGTTGGACCTCACGTACCCAGTCACCTCCATGTTCACTGGGTCTGCCTTTAACCG 1057520673 375142 NM_004247.3(EFTUD2):c.1732C>T (p.Arg578Ter) EFTUD2 Feb 17, 2017 MedGen:CN517202 not provided germline 17 44860033 TTGTGCTTTGGATCTCAGGCTCAGATTTTCCGACCCTTGAAGTTCAATACCACATCTGTTA 121908387 20305 NM_006846.3(SPINK5):c.2368C>T (p.Arg790Ter) SPINK5 Jun 01, 2000 MedGen:C0265962,OMIM:256500,Orphanet:ORPHA634 Netherton syndrome germline 5 148120063 CAAATGAAAAATGGAAAACTCATCTGCACTCGAGAAAGTGACCCTGTCCGGGGTCCAGATG 794728086 197986 NM_001943.4(DSG2):c.1750C>T (p.Gln584Ter) DSG2 Mar 01, 2016 MedGen:C1857777,OMIM:610193 Arrhythmogenic right ventricular cardiomyopathy, type 10 germline 18 31538849 GACAATCAGGGTTTTAGTTGTCCTGAAAAGCAGGTCCTTACACTCACAGTTTGTGAGTGTC 387906799 39125 NM_001244008.1(KIF1A):c.296C>T (p.Thr99Met) KIF1A Oct 06, 2015 MedGen:C3280283,OMIM:614255;MedGen:C1850055,OMIM:260565,Orphanet:ORPHA2836;MedGen:CN517202 Mental retardation, autosomal dominant 9;PEHO syndrome;not provided de novo;germline 2 240788118 ACAACGTGTGCATCTTCGCCTATGGGCAGACGGGTGCCGGCAAGTCCTACACCATGATGGG 121918224 16264 NM_006363.5(SEC23B):c.790C>T (p.Arg264Ter) SEC23B Aug 01, 2009 MedGen:C1306589,OMIM:224100,Orphanet:ORPHA98873,SNOMED CT:68870007 Congenital dyserythropoietic anemia, type II germline 20 18525888 TGGCCAGTAACTCAGGGGAAGAGACCTTTGCGATCCACTGGTGTGGCTTTGTCCATTGCTG 794726789 187754 NM_001165963.1(SCN1A):c.4016C>T (p.Ala1339Val) SCN1A Dec 20, 2014 MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002 Severe myoclonic epilepsy in infancy de novo 2 166002740 TTCCATTTGTGTATTAGGTGGTTGTGAATGCCCTTTTAGGAGCAATTCCATCCATCATGAA 267606989 28387 NM_002834.4(PTPN11):c.412C>T (p.Arg138Ter) PTPN11 Jun 17, 2010 MedGen:C0410530,OMIM:156250,Orphanet:ORPHA2499,SNOMED CT:205481009 Metachondromatosis germline 12 112453274 GAAAAAGGAAAACATGGTAGTTTTCTTGTACGAGAGAGCCAGAGCCACCCTGGAGATTTTG 587784278 169365 NM_000430.3(PAFAH1B1):c.664C>T (p.Gln222Ter) PAFAH1B1 Feb 08, 2013 MedGen:C1843916,OMIM:607432 Lissencephaly 1 germline 17 2672750 AGGGATAAAACTATAAAAATGTGGGAAGTGCAAACTGGGTAAGTAAGTTTAGTTGAAAAGG 762121316 181562 NM_017534.5(MYH2):c.2347C>T (p.Arg783Ter) MYH2 May 01, 2010 MedGen:C1854106,OMIM:605637 Inclusion body myopathy 3 germline 17 10533379 GCTGGTCTTCTGGGGCTCCTAGAGGAGATGCGAGATGACAAGCTGGCCCAGCTGATTACCC 137852923 18444 NM_015102.4(NPHP4):c.1972C>T (p.Arg658Ter) NPHP4 Feb 10, 2016 MedGen:C0687120,Orphanet:ORPHA655,SNOMED CT:204958008;MedGen:C1846979,OMIM:606996 Nephronophthisis;Senior-Loken syndrome 4 germline 1 5904788 GTTGTTGGATTCAGAGTGGCCCAGGACTGCCGAGGAACATCATGGCCAAAGACTGTGTATT 121918467 28380 NM_002834.4(PTPN11):c.1232C>T (p.Thr411Met) PTPN11 Nov 01, 2004 MedGen:C0041409,OMIM:163950 Noonan syndrome 1 germline 12 112486482 GGTTTTTCTTGGCTCTACTCCAGGGGAATACGGAGAGAACGGTCTGGCAATACCACTTTCG 267608643 153512 NM_003159.2(CDKL5):c.1648C>T (p.Arg550Ter) CDKL5 May 17, 2017 MedGen:C2748910,Orphanet:ORPHA3095;MedGen:C1839333,OMIM:300672;MedGen:CN517202 Atypical Rett syndrome;Early infantile epileptic encephalopathy 2;not provided de novo;germline;unknown X 18604572 ACTTTGCTCAGCCCTTCTGGAAGAAATAACCGAAATGAGGGAACGCTGGACTCACGTCGAA 121917783 27083 NM_000136.2(FANCC):c.553C>T (p.Arg185Ter) FANCC Jul 11, 2017 MedGen:C0015625,Orphanet:ORPHA84,SNOMED CT:30575002;MedGen:C3468041,OMIM:227645;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Fanconi anemia;Fanconi anemia, complementation group C;Hereditary cancer-predisposing syndrome;not provided germline;unknown 9 95150056 ATGGCTCCCGAGCGAGTGGCGTCCCTGTCACGAGTTTGTGTCCCACTTATTACCCTGACAG 121908495 20803 NM_004211.4(SLC6A5):c.1888C>T (p.Gln630Ter) SLC6A5 Oct 04, 2012 MedGen:C3553288,OMIM:614618 Hyperekplexia 3 germline 11 20638477 CTCTCCTGTTAGGGTGGAATTTACATGTTTCAGCTTGTGGACACCTATGCTGCCTCCTATG 756659230 226506 NM_015100.3(POGZ):c.2590C>T (p.Arg864Ter) POGZ Mar 24, 2016 MedGen:C4225351,OMIM:616364,Orphanet:ORPHA468678 White-sutton syndrome germline 1 151406445 CACCCCTTTAGGCATGGCCAGACTCGTGACCGAGTGCATGACCGGAACGTGAAGAATATGT 745800041 247509 NM_003504.4(CDC45):c.318C>T (p.Val106=) CDC45 Oct 20, 2016 MedGen:C4310738,OMIM:617063 Meier-gorlin syndrome 7 germline 22 19482803 TGTGTGTGACACCCATAGGCCAGTCAATGTCGTCAATGTATACAACGATACCCAGGTACTT 760703505 222607 NM_000267.3(NF1):c.4537C>T (p.Arg1513Ter) NF1 Jun 23, 2017 Human Phenotype Ontology:HP:0007565,MedGen:C1861975,OMIM:114030,Orphanet:ORPHA2678;MedGen:C0027672,SNOMED CT:699346009;MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003;Human Phenotype Ontology:HP:0100698,MedGen:C1827970;Human Phenotype Ontology:HP:0002943,MedGen:C1857790;MedGen:CN517202 Cafe au lait spots, multiple;Hereditary cancer-predisposing syndrome;Neurofibromatosis, type 1;Subcutaneous neurofibromas;Thoracic scoliosis;not provided germline;unknown 17 31261733 GTATCTAGGGATCATAAAGCTGTTGGAAGACGACCTTTTGATAAGATGGCAACACTTCTTG 104894721 27570 NM_000660.6(TGFB1):c.652C>T (p.Arg218Cys) TGFB1 Mar 05, 2015 Human Phenotype Ontology:HP:0100252,MedGen:C0011989,OMIM:131300,SNOMED CT:34643004 Diaphyseal dysplasia germline 19 41342230 GCCACTCCTACAGGGGAAATTGAGGGCTTTCGCCTTAGCGCCCACTGCTCCTGTGACAGCA 879255548 247414 NM_004625.3(WNT7A):c.304C>T (p.Arg102Trp) WNT7A Aug 08, 2016 MedGen:C1848651,OMIM:276820 Ulna and fibula absence of with severe limb deficiency inherited 3 13854798 GTCTCCTCTTCTCTCCTCCTCGCAGGGAGCCGGGAGGCTGCGTTCACCTACGCCATCATTG 63750972 29287 NM_016835.4(MAPT):c.1866+14C>T MAPT Dec 01, 1994 Human Phenotype Ontology:HP:0002145,MedGen:C0338451,OMIM:600274,Orphanet:ORPHA282,SNOMED CT:230270009;MedGen:CN517202 Frontotemporal dementia;not provided germline 17 46010416 TCCCGGGAGGCGGCAGTGTGAGTACCTTCACACGTCCCATGCGCCGTGCTGTGGCTTGAAT 121913656 29116 NM_002473.5(MYH9):c.3464C>T (p.Thr1155Ile) MYH9 May 01, 2003 MedGen:C0403445,OMIM:153640,SNOMED CT:236422008;MedGen:C0340978,OMIM:155100 Fechtner syndrome;May-Hegglin anomaly germline 22 36295526 AAACAGAGTTGGAGGACACGCTGGATTCCACAGCTGCCCAGCAGGAGCTCAGGTGTGCCCT 727503431 174033 NM_000441.1(SLC26A4):c.2215C>T (p.Gln739Ter) SLC26A4 Jun 21, 2016 Human Phenotype Ontology:HP:0011387,MedGen:C1863752,OMIM:600791;MedGen:C0271829,OMIM:274600,Orphanet:ORPHA705,SNOMED CT:70348004;MedGen:C0271829,OMIM:274600,Orphanet:ORPHA705,SNOMED CT:70348004 Enlarged vestibular aqueduct;Pendred's syndrome;Pendred's syndrome germline;unknown 7 107710179 CTACAGAACCAAGTGAAATCTCAAGAGGGTCAAGGTTCCATTTTAGAAACGGTAAATATTC 757511744 259352 NM_001242896.1(DEPDC5):c.1264C>T (p.Arg422Ter) DEPDC5 Apr 13, 2016 Gene:50987,MedGen:C1858477,OMIM:604364 Epilepsy, familial focal, with variable foci 1 germline 22 31806168 AGCCAGCTCTTTTGTAATAGTTTCACCCCACGAATAAAACTGGCAGGAAAGAAGGTAGGTT 104886270 36059 NM_000495.4(COL4A5):c.4228C>T (p.Arg1410Cys) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108686060 GGTCCAACTGGCCCTCCAGGAGATCCTGGACGCAATGGACTCCCTGGCTTTGATGGTGCAG 747522386 406328 NM_000094.3(COL7A1):c.3631C>T (p.Gln1211Ter) COL7A1 Dec 14, 2016 MedGen:CN517202 not provided germline 3 48586166 CGTCGCTTGGCGCCGGGTATGGACTCTGTCCAGACCTTCTTCGCCGTGGATGATGGGCCAA 121918784 79484 NM_006920.4(SCN1A):c.2542C>T (p.Arg848Cys) SCN1A Jul 14, 2016 MedGen:C1858672,OMIM:604233;MedGen:CN517202 Generalized epilepsy with febrile seizures plus, type 1;not provided germline 2 166039437 CTCGCCAATGTGGAAGGATTATCTGTTCTCCGTTCATTTCGATTGGTAAAAAAAAAAAAAA 387907090 40019 NM_001101362.2(KBTBD13):c.1222C>T (p.Arg408Cys) KBTBD13 Dec 10, 2010 MedGen:C1836472,OMIM:609273 Nemaline myopathy 6 germline 15 65078037 GTGCGCGGTGACACCGTCTATACGGTCAACCGCATGTTCACGCTGCTCTACGCCATCGAGG 397514766 75618 NM_139276.2(STAT3):c.1166C>T (p.Thr389Ile) STAT3 Oct 01, 2012 MedGen:C0022398,OMIM:147060,SNOMED CT:50926003 Hyperimmunoglobulin E syndrome germline 17 42329621 TCAGATCCCGGAAATTTAACATTCTGGGCACAAACACAAAAGTGATGAACATGGAAGAATC 541269678 186814 NM_000352.4(ABCC8):c.2857C>T (p.Gln953Ter) ABCC8 Dec 24, 2015 MedGen:C1257959,OMIM:256450,SNOMED CT:360339005 Persistent hyperinsulinemic hypoglycemia of infancy germline;unknown 11 17407417 GTCACAGAGAGAAAAGCCACAGAGCCACCCCAGGGCCTATCTCGTGCCATGTCCTCGAGGG -1 426381 NM_000398.6(CYB5R3):c.250C>T (p.Arg84Ter) CYB5R3 May 31, 2017 MedGen:CN517202 not provided germline 22 42630965 CCTGCAGGCCAGCACATCTACCTCTCGGCTCGAATTGATGGAAACCTGGTCGTCCGGCCCT 80358936 66929 NM_000059.3(BRCA2):c.7060C>T (p.Gln2354Ter) BRCA2 Nov 03, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 2;Familial cancer of breast;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline 13 32354913 ATACAGAATCCAAATTTTACCGCACCTGGTCAAGAATTTCTGTCTAAATCTCATTTGTATG 1131691383 421323 NM_001256850.1(TTN):c.94789C>T (p.Gln31597Ter) TTN May 09, 2017 MedGen:CN517202 not provided germline 2 178537495 ATGACTTGGTTCCATGGTCAGAAACTTTTGCAAAACTCAGAAAACATTACTATTGAAAACA 765975825 474297 NM_005732.3(RAD50):c.2263C>T (p.Gln755Ter) RAD50 Dec 02, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 5 132603355 AAGGAAATACCAGAATTAAGAAACAAACTGCAGAATGTCAATAGAGACATACAGCGCCTAA 797045655 206978 NM_004321.7(KIF1A):c.821C>T (p.Ser274Leu) KIF1A Apr 26, 2016 MedGen:C3280283,OMIM:614255;MedGen:CN517202 Mental retardation, autosomal dominant 9;not provided germline 2 240783087 GCCCGCAGGAGGGGGCCAACATCAACAAGTCGCTGACCACCCTGGGCAAGGTCATCTCCGC 587777008 70567 NM_006494.3(ERF):c.256C>T (p.Arg86Cys) ERF Apr 19, 2017 Human Phenotype Ontology:HP:0004443,MedGen:C1833340,OMIM:600775;MedGen:CN517202 Craniosynostosis 4;not provided germline 19 42250332 ATGAATTACGACAAGCTGAGCCGGGCCCTGCGGTGAGGACGGGCTGGGGACCCCTGAGCAC 267607239 22577 NM_003482.3(KMT2D):c.16360C>T (p.Arg5454Ter) KMT2D Sep 01, 2010 MedGen:CN030661,OMIM:147920 Kabuki syndrome 1 germline 12 49022332 CCTTTCTAGAATCGAGGCATCTACATGTTCCGAATAAACAATGAACATGTGATTGATGCTA 276174925 67512 NM_000059.3(BRCA2):c.9466C>T (p.Gln3156Ter) BRCA2 Sep 08, 2016 MedGen:C2675520,OMIM:612555 Breast-ovarian cancer, familial 2 germline 13 32394898 TTTTCTGCTAGTCCAAAAGAGGGCCACTTTCAAGAGACATTCAACAAAATGAAAAATACTG -1 426747 NM_003482.3(KMT2D):c.11515C>T (p.Gln3839Ter) KMT2D May 09, 2017 MedGen:CN030661,OMIM:147920 Kabuki syndrome 1 germline 12 49033190 ATGACCCAGTCCCGGGTGCTCAGTTCCCCCCAGCTGGCACAGCAGGGTCAGGGCCTTATGG 587777334 132626 NM_005051.2(QARS):c.1543C>T (p.Arg515Trp) QARS Jan 17, 2017 MedGen:C4014239,OMIM:615760,Orphanet:ORPHA404437;MedGen:CN517202 Microcephaly, progressive, with seizures and cerebral and cerebellar atrophy;not provided germline 3 49099415 CTTCTTATCCACAGGGACTGGGATGACCCACGGCTCTTTACACTCACGGCCCTGCGACGGC -1 428571 NM_020732.3(ARID1B):c.3898C>T (p.Gln1300Ter) ARID1B Jan 12, 2017 MedGen:C3281201,OMIM:614562 Mental retardation, autosomal dominant 12 germline 6 157196200 GGAAGCAGCGAGCCCTTTATGACGCAAGGACAGATGCCCAACAGCAGCATGCAGGACATGT 778479139 206622 NM_033409.3(SLC52A3):c.634C>T (p.Arg212Cys) SLC52A3 Mar 17, 2015 MedGen:CN029849,OMIM:211530 Brown-Vialetto-Van Laere syndrome 1 germline 20 763937 ATGGAAGCACCCTTGTCCCACCTGGAGAGCCGCTACCTTCCCGCCCACTTCTCACCCCTGG 207482230 45764 NM_006070.5(TFG):c.854C>T (p.Pro285Leu) TFG Feb 29, 2016 Gene:50989,MedGen:C1858338,OMIM:604484,Orphanet:ORPHA90117;MedGen:CN517202 Neuropathy, hereditary motor and sensory, Okinawa type;not provided germline 3 100748182 GCTATAGTCAGCAGACTGGACCTCAACAACCTCAGCAGTTCCAGGGATATGGCCAGCAACC 193302860 34576 NM_032520.4(GNPTG):c.857C>T (p.Thr286Met) GNPTG Jul 05, 2012 MedGen:C1854896,OMIM:252605,Orphanet:ORPHA423470 Mucolipidosis III Gamma not provided 16 1363030 CTTCCAACTTGGAGCACTTGGGCCACGAGACGCCCAGAGCCAAGTCTCCAGAGCAGCTGCG 121907972 18964 NM_000520.5(HEXA):c.508C>T (p.Arg170Trp) HEXA Jan 05, 2016 MedGen:C0039373,OMIM:272800,Orphanet:ORPHA845,SNOMED CT:111385000 Tay-Sachs disease germline;unknown 15 72353130 GAGATTGAGGACTTTCCCCGCTTTCCTCACCGGGGCTTGCTGTTGGATACATCTCGCCATT 752160950 190171 NM_000135.3(FANCA):c.2557C>T (p.Arg853Ter) FANCA Jul 02, 2009 MedGen:C3469521,OMIM:227650 Fanconi anemia, complementation group A germline 16 89767185 TACTCTCTCTGCAAGTTTTCTTCCCAGTCACGAGATACTTTGTGCAGCTGCTTATCTCCAG 587777728 165913 NM_032492.3(JAGN1):c.130C>T (p.His44Tyr) JAGN1 Sep 01, 2014 Human Phenotype Ontology:HP:0005541,MedGen:C1853118,Orphanet:ORPHA42738;MedGen:C4014954,OMIM:616022,Orphanet:ORPHA423384 Severe congenital neutropenia;Severe congenital neutropenia 6, autosomal recessive germline 3 9892955 AAGTATGAAATCAAGAAGCTGATCTACGTACATCTGGTCATATGGCTGCTGCTGGTTGCTA 137852928 18426 NM_001166136.1(EVC2):c.2608C>T (p.Arg870Trp) EVC2 Dec 01, 2002 MedGen:C0013903,OMIM:225500,Orphanet:ORPHA289,SNOMED CT:62501005 Chondroectodermal dysplasia germline 4 5584832 GTCCCCTCCCAGGTTCGAGGTGAATTGCTGCGGGAGAGAGTGCAGCGGATGGAGGCACAGG 121912893 32434 NM_001844.4(COL2A1):c.1957C>T (p.Arg653Ter) COL2A1 Feb 10, 2017 MedGen:C1836081,Orphanet:ORPHA209867;MedGen:C2020284,OMIM:108300;MedGen:CN517202 Rhegmatogenous retinal detachment, autosomal dominant;Stickler syndrome type 1;not provided germline 12 47983721 TCTTTTCCACTGCAGGGACCTGCTGGTGAACGAGGCGAGCAGGGTGCTCCTGGGCCATCTG 754894257 434425 NM_172250.2(MMAA):c.202C>T (p.Gln68Ter) MMAA - MedGen:C1855109,OMIM:251100,Orphanet:ORPHA79310 Methylmalonic aciduria cblA type germline 4 145639341 TCAGATGGCTTAAAGAGAAAATTATGTGTACAAACAACCTTAAAGGACCACACAGAAGGAC 773242930 482002 NM_002180.2(IGHMBP2):c.2368C>T (p.Arg790Ter) IGHMBP2 Mar 16, 2017 MedGen:CN517202 not provided germline 11 68936848 ATCACTGTGAGCAAGAGGGCCCCGCGACCCCGAGCAGCCCTGGGACCCCCAGCAGGGACCG 460897 31584 NM_000186.3(CFH):c.3572C>T (p.Ser1191Leu) CFH Mar 10, 2011 MedGen:C2749604,OMIM:235400 Atypical hemolytic-uremic syndrome 1 germline 1 196747189 TAAGGTGGACAGCCAAACAGAAGCTTTATTCGAGAACAGGTGAATCAGTTGAATTTGTGTG 121918388 32932 NM_000384.2(APOB):c.6835C>T (p.Gln2279Ter) APOB Jul 01, 2005 MedGen:C1862599 Hypobetalipoproteinemia, normotriglyceridemic germline 2 21010033 CTTAAGAGACACATACAGAATATAGACATCCAGCACCTAGCTGGAAAGTTAAAACAACACA 121917872 15499 NM_000097.5(CPOX):c.623C>T (p.Ser208Phe) CPOX Jan 01, 2002 MedGen:C0342856,SNOMED CT:190915002 Coproporphyria germline 3 98591089 GTGTTTTCGAAAAGGCTGGGGTGAGCATTTCTGTTGTTCATGGAAATCTTTCAGAGGAAGC 587784095 168153 NM_022455.4(NSD1):c.3067C>T (p.Arg1023Ter) NSD1 Feb 08, 2013 MedGen:CN035106,OMIM:117550 Sotos syndrome 1 germline 5 177211466 TCAGACTGTGTTACTAGGCGCAACTGTGGACGATCAAAGCCTTCATCCAAATTGCGAGATG 137852494 25099 NM_000194.2(HPRT1):c.151C>T (p.Arg51Ter) HPRT1 Dec 02, 2013 na;MedGen:C0023374,OMIM:300322,SNOMED CT:10406007;MedGen:CN517202 HPRT FUJIMI;Lesch-Nyhan syndrome;not provided germline X 134475197 TTTTATTTCTGTAGGACTGAACGTCTTGCTCGAGATGTGATGAAGGAGATGGGAGGCCATC 41278174 426889 NM_001171.5(ABCC6):c.3190C>T (p.Arg1064Trp) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16165739 ACGGTTGACGTGGACATTCCAGACAAACTCCGGTCCCTGCTGATGTACGCCTTTGGACTCC 267607192 19675 NM_052985.3(IFT122):c.1118C>T (p.Ser373Phe) IFT122 Sep 12, 2013 MedGen:C0432235,OMIM:218330 Cranioectodermal dysplasia 1 germline 3 129476463 TGCGGCTTGGGACTGTTGGGGAGCAGAACTCCTGGGTGTGGACGTGTCAAGCGAAACCGGA 104893720 20964 NM_006580.3(CLDN16):c.445C>T (p.Arg149Ter) CLDN16 Jul 02, 1999 MedGen:C0268448,OMIM:248250,Orphanet:ORPHA31043,SNOMED CT:80710001 Primary hypomagnesemia germline 3 190404779 CCTGGTCTTCCAGTGAAGCTGGTGGTAACTCGAGCGTTGATGATTACTGCAGATATTCTAG 515726211 136383 NM_000119.2(EPB42):c.920C>T (p.Thr307Ile) EPB42 Mar 13, 2014 MedGen:C2675192,OMIM:612690 Spherocytosis type 5 germline 15 43209276 AGGCCTGGGTGTTGGCTGCTGTTGCTTGCACAGGTTGGTCCCCTTGTCTCCTGTAGAGTGC 121918462 28373 NM_002834.4(PTPN11):c.218C>T (p.Thr73Ile) PTPN11 Aug 07, 2017 Human Phenotype Ontology:HP:0012209,MedGen:C0349639,OMIM:607785,Orphanet:ORPHA86834;MedGen:CN074218,OMIM:151100;MedGen:C0410530,OMIM:156250,Orphanet:ORPHA2499,SNOMED CT:205481009;MeSH:D009634,MedGen:C0028326,Orphanet:ORPHA648,SNOMED CT:205824006;MedGen:C0041409,OMIM:163950;MedGen:C0041409,OMIM:163950;MedGen:CN166718,Orphanet:ORPHA98733;MedGen:CN517202 Juvenile myelomonocytic leukemia;LEOPARD syndrome 1;Metachondromatosis;Noonan syndrome;Noonan syndrome 1;Noonan syndrome 1;Rasopathy;not provided germline;unknown 12 112450398 ATGACCTGTATGGAGGGGAGAAATTTGCCACTTTGGCTGAGTTGGTCCAGTATTACATGGA -1 457953 NM_000503.5(EYA1):c.1684C>T (p.Gln562Ter) EYA1 Sep 27, 2016 MedGen:C0265234,OMIM:113650,Orphanet:ORPHA107,SNOMED CT:290006 Melnick-Fraser syndrome germline 8 71211170 GTTGTTATAGGAGATGGTGTAGAAGAAGAACAAGGAGCAAAAAAGGTGAGCATTCCTAGAT 104894636 20147 NM_000199.3(SGSH):c.220C>T (p.Arg74Cys) SGSH Jun 15, 2017 MedGen:C0086647,OMIM:252900,Orphanet:ORPHA79269,SNOMED CT:41572006;MedGen:CN517202 Mucopolysaccharidosis, MPS-III-A;not provided germline;inherited 17 80217061 TTCACCTCGGTCAGCAGCTGCTCTCCCAGCCGCGCCAGCCTCCTCACTGGCCTGCCCCAGG 67960011 26027 NM_000531.5(OTC):c.421C>T (p.Arg141Ter) OTC Jul 01, 1989 MedGen:C0268542,OMIM:311250,Orphanet:ORPHA664,SNOMED CT:80908008;MedGen:CN517202 Ornithine carbamoyltransferase deficiency;not provided germline;unknown X 38401309 TTGTCTAGCATGGCAGATGCAGTATTGGCTCGAGTGTATAAACAATCAGATTTGGACACCC 63751422 96795 NM_000535.6(PMS2):c.1927C>T (p.Gln643Ter) PMS2 Jul 25, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0009405,Orphanet:ORPHA443090;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:C0265325,OMIM:276300,Orphanet:ORPHA252202,SNOMED CT:61665008;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Hereditary nonpolyposis colon cancer;Lynch syndrome;Turcot syndrome;not provided germline 7 5986838 CATCATGAAGCACAGCAAAGTGAAGGGGAACAGAATTACAGGAAGTTTAGGGCAAAGATTT 774163084 414418 NM_001013703.3(EIF2AK4):c.2458C>T (p.R820*) EIF2AK4 - MedGen:C0340848,OMIM:234810,SNOMED CT:234161007 Familial pulmonary capillary hemangiomatosis germline 15 39988037 TTACGAGACACCATTGACCAGGGACTGTATCGAGACACCGTCAGACTCTGGAGGCTTTTTC 72653801 426913 NM_001171.5(ABCC6):c.2831C>T (p.Thr944Ile) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16169810 TGCACCTGGCCTACCTGCGTGCCGTGGGCACCCCCCTCTGCCTCTACGCACTCTTCCTCTT 1131692174 424177 NM_003797.4(EED):c.772C>T (p.His258Tyr) EED Jul 17, 2017 MedGen:CN314204,OMIM:617561 Cohen-Gibson syndrome germline 11 86266128 GGTGAAAAAATAATGTCCTGTGGTATGGATCATTCTCTTAAACTTTGGAGGATCAATTCAA 796053228 202756 NM_014191.3(SCN8A):c.5614C>T (p.Arg1872Trp) SCN8A Nov 16, 2016 MedGen:C0393706,Orphanet:ORPHA1934;MedGen:C3281191,OMIM:614558;Human Phenotype Ontology:HP:0200134,MedGen:C0543888;MedGen:CN517202 Early infantile epileptic encephalopathy;Early infantile epileptic encephalopathy 13;Epileptic encephalopathy;not provided de novo;germline 12 51807100 TTGGACATCCTGCGGCAGCAGATGGAAGAGCGGTTCGTGGCATCCAATCCTTCCAAAGTGT 121912558 23618 NM_004999.3(MYO6):c.3496C>T (p.Arg1166Ter) MYO6 May 01, 2003 MedGen:C1843028,OMIM:607821 Deafness, autosomal recessive 37 germline 6 75914119 CCTGCCAGGCAGCGGGAGATTGAAATGAACCGACAGCAACGCTTCTTCCGCATCCCATTCA 121917781 27134 NM_000196.3(HSD11B2):c.1009C>T (p.Arg337Cys) HSD11B2 Nov 01, 1995 MedGen:C2936861,OMIM:218030 Apparent mineralocorticoid excess germline 16 67436794 GATGCGCTGCTGGCAGCTCGGCCCCGCCGCCGCTATTACCCCGGCCAGGGCCTGGGGCTCA -1 460531 NM_000051.3(ATM):c.1495C>T (p.Gln499Ter) ATM Jul 13, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005 Ataxia-telangiectasia syndrome germline 11 108250960 TGTATTACCTTTCGTGGTATAAGTTCTGAGCAAATACAAGCTGAAAACTTTGGCTTACTTG 121434380 17334 NM_015046.5(SETX):c.5929C>T (p.Leu1977Phe) SETX Dec 12, 2006 MedGen:C1853761,OMIM:606002 Spinocerebellar ataxia autosomal recessive 1 germline 9 132296907 ACAGGAAAATCAAAAACTATTGTTGGCCTCCTCTATCGTCTACTGACAGAGGTAGGTATGG 755796920 194830 NM_000433.3(NCF2):c.565C>T (p.Gln189Ter) NCF2 Apr 10, 2015 MedGen:C1856245,OMIM:233710 Chronic granulomatous disease, autosomal recessive cytochrome b-positive, type 2 germline 1 183573229 GTGGGCAAGCTGTTTCGACCAAATGAGAGACAAGTGGCTCAGCTGGCCAAGAAGGATTACC 1085307702 414728 NM_015100.3(POGZ):c.3022C>T (p.Arg1008Ter) POGZ Apr 11, 2017 MedGen:CN517202 not provided germline 1 151406013 AATCCCCAGCGACGTATTCGCCGTTGGCTTCGACGTTTCCAGGCCTCCCAGGGGGAGAATC 281875227 39300 NM_003072.3(SMARCA4):c.2653C>T (p.Arg885Cys) SMARCA4 Sep 07, 2017 MedGen:C3553249,OMIM:614609;MedGen:CN517202 Mental retardation, autosomal dominant 16;not provided de novo;germline 19 11021761 TGGAAGTACATGATTGTGGACGAAGGTCACCGCATGAAGAACCACCACTGCAAGCTGACGC 121912605 17389 NM_016341.3(PLCE1):c.4451C>T (p.Ser1484Leu) PLCE1 Dec 01, 2006 MedGen:C1853124,OMIM:610725 Nephrotic syndrome, type 3 germline 10 94270547 TCATCAACTCTGACCTGCCAATCATCATATCGATTGAGAACCACTGTTCATTGCCTCAGCA 146794392 186609 NM_000228.2(LAMB3):c.1978C>T (p.Arg660Ter) LAMB3 Oct 23, 2017 MedGen:C0079683,OMIM:226700,Orphanet:ORPHA79404,SNOMED CT:400140006;MedGen:CN517202 Junctional epidermolysis bullosa gravis of Herlitz;not provided germline;unknown 1 209623999 TTTTAGTGTAAGCTCCTCTCCCTTCTCAGGCGAACTCTCCAGGGCCTGCAGCTGGATCTGC 137853598 25830 NM_152692.4(C1GALT1C1):c.202C>T (p.Arg68Ter) C1GALT1C1 Oct 27, 2005 MedGen:C0272137,OMIM:300622,SNOMED CT:40387008 Polyagglutinable erythrocyte syndrome somatic X 120626965 GATGAGCGCATGGAGCTCAGTAAGAGCTTTCGAGTATACTGTATTATCCTTGTAAAACCCA 121434507 23728 NM_002843.3(PTPRJ):c.640C>T (p.Arg214Cys) PTPRJ Jul 01, 2002 MedGen:C0699790,OMIM:114500,SNOMED CT:269533000 Carcinoma of colon somatic 11 48123636 AAAATAGAGCCGATCCCAGTTTCTGATCTCCGTGTTGCCCTCACGGGTGTGAGGAAGGCTG 762991211 353881 NM_006177.3(NRL):c.91C>T (p.Arg31Ter) NRL - MedGen:C1849394,OMIM:268100,Orphanet:ORPHA53540 Enhanced s-cone syndrome inherited 14 24082758 TTTGAGGTAAAGCGGGAACCCTCTGAGGGCCGACCTGGCCCCCCTACAGCCTCACTGGGCT 80338844 21935 NM_003002.3(SDHD):c.242C>T (p.Pro81Leu) SDHD Oct 23, 2017 MedGen:C1708353,Orphanet:ORPHA29072;MedGen:C0027672,SNOMED CT:699346009;MedGen:C1868633,OMIM:168000;MedGen:C3276074;Human Phenotype Ontology:HP:0002666,MedGen:C0031511,OMIM:171300;MedGen:CN517202;MedGen:CN169374 Hereditary Paraganglioma-Pheochromocytoma Syndromes;Hereditary cancer-predisposing syndrome;Paragangliomas 1;Paragangliomas 1 with sensorineural hearing loss;Pheochromocytoma;not provided;not specified germline;somatic;unknown 11 112088939 TTGTCAGTGTTTTGCTCCTGGGTCTGCTTCCGGCTGCTTATTTGAATCCTTGCTCTGCGAT 587777400 136568 NM_002641.3(PIGA):c.278C>T (p.Pro93Leu) PIGA Jan 01, 2014 MedGen:C3275508,OMIM:300868,Orphanet:ORPHA300496 Multiple congenital anomalies-hypotonia-seizures syndrome 2 germline X 15331653 TCACCAGTGGCCTCAAAGTCTATTACTTGCCTCTGAAAGTCATGTACAACCAGTCTACAGC 137853208 32849 NM_001082971.1(DDC):c.749C>T (p.Ser250Phe) DDC Apr 15, 2013 MedGen:C1291564,OMIM:608643,Orphanet:ORPHA35708,SNOMED CT:124600004 Deficiency of aromatic-L-amino-acid decarboxylase germline 7 50504025 TTGCCACCCTGGGGACCACAACATGCTGCTCCTTTGACAATCTCTTAGAAGTCGGTCCTAT 41293465 70268 NM_007294.3(BRCA1):c.5503C>T (p.Arg1835Ter) BRCA1 Nov 01, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;Human Phenotype Ontology:HP:0100013,MeSH:D001943,MedGen:C1458155,Orphanet:ORPHA180250,SNOMED CT:126926005;MedGen:CN517202 Breast-ovarian cancer, familial 1;Familial cancer of breast;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;Neoplasm of the breast;not provided germline;somatic;unknown 17 43045767 GGGCAGATGTGTGAGGCACCTGTGGTGACCCGAGAGTGGGTGTTGGACAGTGTAGCACTCT 28936682 23483 NM_000304.3(PMP22):c.469C>T (p.Arg157Trp) PMP22 Dec 18, 2014 MedGen:CN069172;MedGen:C1861669,OMIM:118300,Orphanet:ORPHA90103 Autosomal recessive Dejerine-Sottas syndrome;Charcot-Marie-Tooth disease and deafness germline 17 15230931 CTTCTCAGCGGTGTCATCTATGTGATCTTGCGGAAACGCGAATGAGGCGCCCAGACGGTCT 1057524433 369177 NM_000535.6(PMS2):c.2140C>T (p.Gln714Ter) PMS2 Mar 04, 2017 MedGen:C0009405,Orphanet:ORPHA443090;MedGen:CN517202 Hereditary nonpolyposis colon cancer;not provided germline 7 5982858 GACGAGAAGTATAACTTCGAGATGCTGCAGCAGCACACCGTGCTCCAGGGGCAGAGGCTCA 770038577 225027 NM_003319.4(TTN):c.57895C>T (p.Arg19299Ter) TTN Jul 17, 2017 MedGen:CN230736;MedGen:C1858763,OMIM:604145;EFO:EFO_0000407,Human Phenotype Ontology:HP:0001644,MedGen:C0007193,Orphanet:ORPHA217604,SNOMED CT:195021004 Cardiovascular phenotype;Dilated cardiomyopathy 1G;Primary dilated cardiomyopathy germline 2 178561042 CCTCCAAGAGTTATGATGGATGTCAAGTTCCGAGACGTTATTGTTGTCAAAGCTGGAGAGG 1060501989 393062 NM_000251.2(MSH2):c.388C>T (p.Gln130Ter) MSH2 Sep 05, 2016 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Lynch syndrome germline 2 47410115 TTTACTTAGGCTTCTCCTGGCAATCTCTCTCAGTTTGAAGACATTCTCTTTGGTAACAATG 104895360 103464 NM_000431.3(MVK):c.1162C>T (p.Arg388Ter) MVK Oct 24, 2017 MedGen:C0398691,OMIM:260920,Orphanet:ORPHA343,SNOMED CT:234538002;MedGen:CN517202 Hyperimmunoglobulin D with periodic fever;not provided germline 12 109596548 TCCATCCACTCAGCCACCTCCCTGGACAGCCGAGTCCAGCAAGCCCTGGATGGCCTCTGAG 122468181 26439 NM_080632.2(UPF3B):c.1288C>T (p.Arg430Ter) UPF3B Jun 01, 2013 MedGen:C1970822,OMIM:300676 Mental retardation, syndromic 14, X-linked germline X 119837771 GAAAAGAAAGAAGAAGTGGTCAAGAGAGATCGAATAAGAAACAAGGTGCTGCTTGTCATTA 121912874 32405 NM_001844.4(COL2A1):c.2965C>T (p.Arg989Cys) COL2A1 Mar 01, 2017 Human Phenotype Ontology:HP:0002655,MedGen:C0038015,OMIM:183900,Orphanet:ORPHA253;MedGen:CN517202 Spondyloepiphyseal dysplasia congenita;not provided germline 12 47978329 CAGAGAGGCATCGTCGGTCTGCCTGGGCAACGTGGTGAGAGAGGATTCCCTGGCTTGCCTG 104894785 169914 NM_178151.2(DCX):c.265C>T (p.Arg89Ter) DCX Mar 31, 2014 Human Phenotype Ontology:HP:0002282,MedGen:C0008519 Heterotopia germline X 111410134 AGCTTTGACGCCTTGCTGGCTGACCTGACGCGATCTCTGTCTGACAACATCAACCTGCCTC 587784409 170148 NM_006306.3(SMC1A):c.2131C>T (p.Arg711Trp) SMC1A Feb 08, 2013 MedGen:C1802395,OMIM:300590,SNOMED CT:55016009 Congenital muscular hypertrophy-cerebral syndrome germline X 53405077 GTGCAGTCTCAGGCCCATGGACTGCAGATGCGGCTCAAGTACTCCCAGAGTGACCTAGAAC 201153410 50332 NM_000541.4(SAG):c.577C>T (p.Arg193Ter) SAG Jan 01, 1998 MedGen:C1306122,OMIM:258100,SNOMED CT:193687000 Oguchi's disease germline 2 233328542 CATGCCCCACTTGAGATGGGTCCCCAGCCCCGAGCTGAGGCGGCCTGGCAGTTCTTCATGT 1135402768 425027 NM_000527.4(LDLR):c.487C>T (p.Gln163Ter) LDLR Mar 01, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11105393 TTCCAGTGCAACAGCTCCACCTGCATCCCCCAGCTGTGGGCCTGCGACAACGACCCCGACT 118203901 29598 NM_005562.2(LAMC2):c.733C>T (p.Arg245Ter) LAMC2 Jan 01, 2002 MedGen:C0268374,OMIM:226650,Orphanet:ORPHA89840,SNOMED CT:33662006 Adult junctional epidermolysis bullosa germline 1 183222181 CGCCATCAAGATGTGTTTAGCTCAGCCCAACGACTAGACCCTGTCTATTTTGTGGCTCCTG -1 482071 NM_000138.4(FBN1):c.6325C>T (p.Gln2109Ter) FBN1 Dec 20, 2017 MedGen:CN517202 not provided germline 15 48437376 ATGAGTGTCTCCACCACAGAGGCCTTCCGCCAGATATGTCCTTATGGAAGTGGGATCATCG 752164603 358028 NM_000391.3(TPP1):c.640C>T (p.Gln214Ter) TPP1 Aug 22, 2016 MedGen:C1876161,OMIM:204500,Orphanet:ORPHA228349 Ceroid lipofuscinosis neuronal 2 unknown 11 6617022 GTGATCCGTAAGCGATACAACTTGACCTCACAAGACGTGGGCTCTGGCACCAGCAATAACA 132630258 26220 NM_002621.2(CFP):c.481C>T (p.Arg161Ter) CFP Sep 01, 1995 MedGen:C1839454,OMIM:312060,Orphanet:ORPHA2966 Properdin deficiency, X-linked germline X 47627564 ACCTGCTCCAAAGGGACCCGGACCCGCAGGCGAGCCTGTAATCACCCTGCTCCCAAGTGTG 80338744 24496 NM_004525.2(LRP2):c.1093C>T (p.Arg365Ter) LRP2 Jun 28, 2011 MedGen:C1857277,OMIM:222448,Orphanet:ORPHA2143 Donnai Barrow syndrome germline 2 169282951 TGGGGAATTTGTGACCAGAAGTGTGAAAGCCGACCTGGCCGTCACCTGTGCCACTGTGAAG 398123044 75295 NM_001017979.2(RAB28):c.409C>T (p.Arg137Ter) RAB28 Jul 11, 2013 MedGen:C3809299,OMIM:615374 Cone-rod dystrophy 18 germline 4 13381577 AACACCTTTCTAGTTGATTTGGAGCATATGCGAACAATAAAACCTGAAAAACACTTACGGT -1 427480 NM_001009944.2(PKD1):c.6487C>T (p.Arg2163Ter) PKD1 Feb 22, 2017 MedGen:C0085548,OMIM:263200,Orphanet:ORPHA731,SNOMED CT:28770003;MedGen:CN169374 Autosomal recessive polycystic kidney disease;not specified germline 16 2108680 GTGGTCCTGCCCCTGCAGGTGCTGATGCGGCGATCACAGCGCAACTACTTGGAGGCCCACG 122445105 26774 NM_000489.4(ATRX):c.736C>T (p.Arg246Cys) ATRX Sep 07, 2017 MeSH:D030342,MedGen:C0950123;MedGen:CN517202 Inborn genetic diseases;not provided germline X 77684520 CATAATGCTTTCTGCAAGAAATGCATTCTACGCAACCTTGGTCGAAAGGAGTTGTCCACAA 797045360 209257 NM_000052.6(ATP7A):c.2555C>T (p.Pro852Leu) ATP7A Feb 08, 2013 MedGen:C0022716,OMIM:309400,Orphanet:ORPHA565,SNOMED CT:59178007 Menkes kinky-hair syndrome germline X 78015810 TACAACGTGGAGATATCATTAAAGTAGTTCCAGGAGGCAAATTTCCAGTGGATGGTCGTGT 745368359 377333 NM_173483.3(CYP4F22):c.1084C>T (p.Arg362Ter) CYP4F22 Apr 29, 2015 MedGen:CN517202 not provided germline 19 15544227 GCAAAGTATCCGGAATACCAGGAGAAATGCCGAGAAGAGATTCAGGAAGTCATGAAAGGCC 606231297 167524 NM_006254.3(PRKCD):c.1840C>T (p.Arg614Trp) PRKCD Apr 18, 2013 MedGen:C3809928,OMIM:615559 Autoimmune lymphoproliferative syndrome, type III germline 3 53189969 AAGACCATAAACTGGACTCTGCTGGAAAAGCGGAGGTTGGAGCCACCTTTCAGGCCCAAAG 376393123 48255 NM_001904.3(CTNNB1):c.925C>T (p.Gln309Ter) CTNNB1 Feb 12, 2013 MedGen:C3554449,OMIM:615075,Orphanet:ORPHA404473 Mental retardation, autosomal dominant 19 germline 3 41225850 GACTGCCTTCAAATTTTAGCTTATGGCAACCAAGAAAGCAAGGTAAGAGAATTATTCTTTA 121918314 21305 NM_003921.4(BCL10):c.172C>T (p.Arg58Ter) BCL10 Nov 23, 2011 MedGen:C3276200 Male germ cell tumor, somatic somatic 1 85270792 AGTAGAGAAGACACTGAAGAAATTTCTTGTCGAACATCAAGTAGAAAAAGGGCTGGAAAAT 121912642 22547 NM_033343.3(LHX4):c.250C>T (p.Arg84Cys) LHX4 Mar 01, 2008 MedGen:C2678408,OMIM:262700,Orphanet:ORPHA85442 Pituitary hormone deficiency, combined 4 germline 1 180266393 GCCCTAATCCTTTCCTGCTGCCCTGACAGGCGCTTCGGCACAAAATGCACGGCCTGCCAGC -1 446655 NM_001193416.2(DDX3X):c.874C>T (p.Arg292Ter) DDX3X Sep 14, 2017 MedGen:CN517202 not provided germline X 41344248 TAACATTTTTTTTGCTTATAGTTTTCATACCGATCTAGAGTTCGTCCTTGCGTGGTTTATG 11538758 28443 NM_000311.4(PRNP):c.314C>T (p.Pro105Leu) PRNP Apr 02, 2013 MedGen:C0162534,Orphanet:ORPHA56970;MedGen:C0017495,OMIM:137440,Orphanet:ORPHA356,SNOMED CT:67155006;MeSH:D030342,MedGen:C0950123 Genetic prion diseases;Gerstmann-Straussler-Scheinker syndrome;Inborn genetic diseases germline 20 4699534 CCCACAGTCAGTGGAACAAGCCGAGTAAGCCAAAAACCAACATGAAGCACATGGCTGGTGC 121434503 23403 NM_006267.4(RANBP2):c.1958C>T (p.Thr653Ile) RANBP2 Dec 04, 2014 MedGen:C2675556,OMIM:608033,Orphanet:ORPHA88619 Encephalopathy, acute, infection-induced, 3, suceptibility to germline 2 108753466 TTGTTGAATATGAAGAAGACGCACACATAACTTTTGCTATATTGGATGCAGTAAATGGAAA 387906749 39016 NM_024408.3(NOTCH2):c.7165C>T (p.Gln2389Ter) NOTCH2 Jan 01, 2012 MedGen:C0917715,OMIM:102500,SNOMED CT:63122002 Hajdu-Cheney syndrome germline 1 119915557 TCTGTGGGCAAGTACCCCACACCCCCTTCACAGCACAGTTATGCTTCCTCAAATGCTGCTG 267607137 15798 NM_031466.7(TRAPPC9):c.1708C>T (p.Arg570Ter) TRAPPC9 Feb 03, 2016 MedGen:C2750791,OMIM:613192;MedGen:CN517202 Mental retardation, autosomal recessive 13;not provided germline 8 140360131 CGTTTGCTCCATGAATTGGTCTACGCCTCCCGAAGGATGGGGAACCCTGCCCTCTCTGTCA -1 442947 NM_001271208.1(NEB):c.19405C>T (p.Arg6469Ter) NEB Sep 01, 2017 MedGen:CN517202 not provided germline 2 151554954 GACGATGATCCGAACACAGCACGGTGCCTCCGAGTTGGCAAGCTTAACATCGATGTAAGTA 118204003 16243 NM_000429.2(MAT1A):c.1070C>T (p.Pro357Leu) MAT1A Sep 03, 2015 MedGen:C0268621,OMIM:250850,Orphanet:ORPHA168598,SNOMED CT:57835009;MedGen:CN517202 Hepatic methionine adenosyltransferase deficiency;not provided germline 10 80274535 ATGTGGTGCATAAGAACTTCGACCTCCGGCCGGGCGTCATTGTCAGGTAAAGTGCCATGCG 886041716 264045 NM_001165963.1(SCN1A):c.2797C>T (p.His933Tyr) SCN1A Feb 02, 2017 MedGen:CN517202 not provided germline 2 166037925 ATCGCCAGTGATTGTCAACTCCCACGCTGGCACATGAATGACTTCTTCCACTCCTTCCTGA 571038432 200055 NM_172250.2(MMAA):c.988C>T (p.Arg330Ter) MMAA Jan 07, 2016 MedGen:C1855109,OMIM:251100,Orphanet:ORPHA79310;MedGen:CN517202 Methylmalonic aciduria cblA type;not provided germline 4 145655165 CCTTTTCGATAGGTAATTCGTATTTCTGCCCGAAGTGGAGAGGGGATCTCTGAAATGTGGG 104893705 23380 NM_000388.3(CASR):c.1942C>T (p.Arg648Ter) CASR Aug 01, 2004 MedGen:C1809471,OMIM:145980,Orphanet:ORPHA93372,SNOMED CT:190868007;MedGen:C1832615,OMIM:239200,Orphanet:ORPHA417 Hypocalciuric hypercalcemia, familial, type 1;Neonatal severe hyperparathyroidism germline 3 122283896 CGCAACACACCCATTGTCAAGGCCACCAACCGAGAGCTCTCCTACCTCCTCCTCTTCTCCC 121918440 28726 NM_018849.2(ABCB4):c.2869C>T (p.Arg957Ter) ABCB4 Oct 18, 2017 MedGen:C3554241,OMIM:614972;MedGen:C1865643,OMIM:602347,Orphanet:ORPHA79305 Cholestasis, intrahepatic, of pregnancy 3;Progressive familial intrahepatic cholestasis 3 germline 7 87411948 TTTATGTATTTTTCCTATGCCGGTTGTTTTCGATTTGGTGCATATCTCATTGTGAATGGAC 764342199 396025 NM_000535.6(PMS2):c.1912C>T (p.Gln638Ter) PMS2 Mar 10, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Hereditary cancer-predisposing syndrome;Lynch syndrome germline 7 5986853 CGAATAAAGCAGTTACATCATGAAGCACAGCAAAGTGAAGGGGAACAGAATTACAGGAAGT 373442996 359103 NM_002936.4(RNASEH1):c.469C>T (p.Arg157Ter) RNASEH1 Jul 29, 2015 MedGen:C4225312,OMIM:616479,Orphanet:ORPHA329336 Progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal recessive 2 germline 2 3550413 TGCTGCTCCAGTAATGGGCGTAGAAGGCCGCGAGCAGGAATCGGCGTTTACTGGGGGCCAG 121918525 25715 NM_031407.6(HUWE1):c.12037C>T (p.Arg4013Trp) HUWE1 Feb 01, 2008 MedGen:C2678046,OMIM:300706,Orphanet:ORPHA85328 Mental retardation, X-linked, syndromic, turner type germline X 53537656 CAAGAGCTGGAGCGTTTAGATGAGGGGCTCCGGAAAGAAGACATGGCTGTGCATGTCCGTC 104893757 28644 NM_001122757.2(POU1F1):c.71C>T (p.Pro24Leu) POU1F1 Dec 15, 1992 MedGen:C2751608,OMIM:613038 Pituitary hormone deficiency, combined 1 germline 3 87276392 CTCTGAATTCTGACGCCTCTGCAACTCTGCCTCTGATAATGCATCACAGTGCTGCCGAGTG 770740586 362420 NM_018713.2(SLC30A10):c.1006C>T (p.His336Tyr) SLC30A10 Feb 09, 2017 OMIM:613280 Hypermanganesemia with dystonia 1 germline 1 219915901 GTGCCTGGAATTAGCAGTGTACATGAAGTGCACATCTGGGAACTTGTAAGTGGAAAGATTA 137852445 25317 NM_000132.3(F8):c.5422C>T (p.Leu1808Phe) F8 Dec 01, 1993 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154904975 GCCTCTCGTCCCTATTCCTTCTATTCTAGCCTTATTTCTTATGAGGAAGATCAGAGGCAAG 281865004 47664 NM_024312.4(GNPTAB):c.2866C>T (p.His956Tyr) GNPTAB May 10, 2012 MedGen:C0033788,OMIM:252600,Orphanet:ORPHA423461,SNOMED CT:65764006 Pseudo-Hurler polydystrophy not provided 12 101761613 TTTGGATTCACATCGCGGAAAGTCCCTGCTCACATGCCTCACATGATTGACCGGATTGTTA 28934573 27398 NM_000546.5(TP53):c.722C>T (p.Ser241Phe) TP53 May 26, 2017 Human Phenotype Ontology:HP:0030078,MeSH:C538231,MedGen:C0152013;Human Phenotype Ontology:HP:0010796,MedGen:C0677865;Human Phenotype Ontology:HP:0011459,MedGen:C0152018,Orphanet:ORPHA70482;MedGen:C0235782;MeSH:D015179,MedGen:CN236642;Human Phenotype Ontology:HP:0100843,MeSH:D005909,MedGen:C0017636,SNOMED CT:63634009;Human Phenotype Ontology:HP:0002884,MedGen:C0206624,Orphanet:ORPHA449;MedGen:C0027672,SNOMED CT:699346009;MedGen:C0085390,Orphanet:ORPHA524,SNOMED CT:428850001;Human Phenotype Ontology:HP:0012539,MedGen:C0024305,OMIM:605027,Orphanet:ORPHA547,SNOMED CT:1929004;MeSH:C562393,MedGen:C0151779,SNOMED CT:93655004;MedGen:C0153574,Orphanet:ORPHA213569;Human Phenotype Ontology:HP:0030692,MeSH:D001932,MedGen:C0006118,SNOMED CT:126952004;Human Phenotype Ontology:HP:0100013,MeSH:D001943,MedGen:C1458155,Orphanet:ORPHA180250,SNOMED CT:126926005;Human Phenotype Ontology:HP:0002669,MeSH:D012516,MedGen:C0029463,OMIM:259500,Orphanet:ORPHA668,SNOMED CT:21708004;MedGen:C0279663;Human Phenotype Ontology:HP:0006725,MedGen:C0281361;MeSH:C538614,MedGen:C1336078;Human Phenotype Ontology:HP:0005584,MeSH:D002292,MedGen:C0007134,OMIM:605074,Orphanet:ORPHA217071,SNOMED CT:41607009;MeSH:C535575,MedGen:C1168401,OMIM:275355,Orphanet:ORPHA67037;Human Phenotype Ontology:HP:0006739,MedGen:C0553723;Human Phenotype Ontology:HP:0006740,MedGen:C0279680;MedGen:C0280630 Adenocarcinoma of lung;Brainstem glioma;Carcinoma of esophagus;Carcinoma of gallbladder;Colorectal Neoplasms;Glioblastoma;Hepatoblastoma;Hereditary cancer-predisposing syndrome;Li-Fraumeni syndrome;Malignant lymphoma, non-Hodgkin;Malignant melanoma of skin;Malignant neoplasm of body of uterus;Neoplasm of brain;Neoplasm of the breast;Osteosarcoma;Ovarian Serous Cystadenocarcinoma;Pancreatic adenocarcinoma;Papillary renal cell carcinoma, sporadic;Renal cell carcinoma, papillary, 1;Squamous cell carcinoma of the head and neck;Squamous cell carcinoma of the skin;Transitional cell carcinoma of the bladder;Uterine Carcinosarcoma germline;somatic 17 7674241 CCATCCACTACAACTACATGTGTAACAGTTCCTGCATGGGCGGCATGAACCGGAGGCCCAT 80358529 46355 NM_000059.3(BRCA2):c.274C>T (p.Gln92Ter) BRCA2 Nov 11, 2016 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;Human Phenotype Ontology:HP:0100013,MeSH:D001943,MedGen:C1458155,Orphanet:ORPHA180250,SNOMED CT:126926005;MedGen:CN517202 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;Neoplasm of the breast;not provided germline;somatic 13 32319283 AAAGAGCAAGGGCTGACTCTGCCGCTGTACCAATCTCCTGTAAAAGAATTAGATAAATTCA 137853063 22536 NM_003384.2(VRK1):c.1072C>T (p.Arg358Ter) VRK1 Jul 10, 2017 MeSH:D030342,MedGen:C0950123;MedGen:C0000772,SNOMED CT:116022009,SNOMED CT:444406006;Gene:100852400,MedGen:C1843504,OMIM:607596;MedGen:CN517202 Inborn genetic diseases;Multiple congenital anomalies;Pontocerebellar hypoplasia type 1A;not provided germline 14 96876033 CTCTCTCTCTTTAATTTTATATGTAAGAAGCGAAAGAAAGAAATTGAAGAAAGCAAGGAAC 121909555 33056 NM_000488.3(SERPINC1):c.1316C>T (p.Pro439Leu) SERPINC1 Aug 09, 1988 MedGen:C0272375,OMIM:613118,Orphanet:ORPHA82,SNOMED CT:36351005 Antithrombin III deficiency germline 1 173903968 CCAACAGGGTGACTTTCAAGGCCAACAGGCCTTTCCTGGTTTTTATAAGAGAAGTTCCTCT 794727333 192720 NM_000276.3(OCRL):c.2299C>T (p.Gln767Ter) OCRL May 28, 2014 MedGen:C1845167,OMIM:300555,Orphanet:ORPHA93623;MedGen:C0028860,OMIM:309000,Orphanet:ORPHA534,SNOMED CT:79385002 Dent disease 2;Lowe syndrome germline X 129588221 CAGACCCCTGGAATGCAGGAAGAGCTCCAGCAGATCATTGATTGTCTGGATACCAGCATTC 397514590 48385 NM_003036.3(SKI):c.103C>T (p.Pro35Ser) SKI Feb 01, 2015 MedGen:C1321551,OMIM:182212,SNOMED CT:83092002 Shprintzen-Goldberg syndrome de novo;germline 1 2228869 CACCTGAGCTCCATGAGCTCGCTGGGCGGCCCGGCCGCTTTCTCGGCGCGCTGGGCGCAGG 140630 197685 NM_000138.4(FBN1):c.4930C>T (p.Arg1644Ter) FBN1 Jan 17, 2017 MedGen:CN118826,Orphanet:ORPHA91387;MedGen:CN517202 Thoracic aortic aneurysm and aortic dissection;not provided germline 15 48465580 CCAACCGGCTACTACCTGAATGAAGATACACGAGTGTGTGATGGTAAATGGTCCTGGTAGG 72657316 229575 NM_001277115.1(DNAH11):c.4333C>T (p.Arg1445Ter) DNAH11 Jan 07, 2016 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244 Ciliary dyskinesia germline 7 21619178 CTGCGGTTACACAGAGTGGAAGATGATGTCCGAAGGATTGTGGACAAGGCGGTGAAAGAGC 386833951 71152 NM_004646.3(NPHS1):c.532C>T (p.Gln178Ter) NPHS1 Oct 17, 2016 MedGen:C0403399,OMIM:256300,Orphanet:ORPHA839,SNOMED CT:197601003 Finnish congenital nephrotic syndrome unknown 19 35850440 CCTCTAGCCCTCTTGCTGCCCCAAGGTGGACAGACAATATCTGACATCTCTGCAAACGTGA 121434496 23066 NM_003073.4(SMARCB1):c.544C>T (p.Gln182Ter) SMARCB1 Mar 04, 2014 MedGen:C4016745 Schwannomatosis 1, somatic somatic 22 23803338 GACCCAGCTGTGATCCATGAGAACGCATCTCAGCCCGAGGTGCTGGTCCCCATCCGGCTGG -1 461452 NM_000051.3(ATM):c.4609C>T (p.Gln1537Ter) ATM Jul 13, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005 Ataxia-telangiectasia syndrome germline 11 108292791 CTTGTGTATGAGCAGGTGGAGGTTCAGAAACAGGTAATTTTCTGACTCATCTTCAAAATGG 199473002 78299 NM_000238.3(KCNH2):c.2477C>T (p.Thr826Ile) KCNH2 Jun 12, 2013 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MedGen:CN517202 Congenital long QT syndrome;not provided germline 7 150948971 GCAAGTCGAACGGGGATGTGCGGGCCCTCACCTACTGTGACCTACACAAGATCCATCGGGA 530348521 260264 NM_003560.3(PLA2G6):c.2221C>T (p.Arg741Trp) PLA2G6 Jul 27, 2016 MedGen:CN517202 not provided germline 22 38112559 GCTTCTCACCAGTGCACGGATCCAGACGGGCGGGCTGTGGACCGGGCACGGGCCTGGTGCG 764769351 440124 NM_001080463.1(DYNC2H1):c.1078C>T (p.Arg360Ter) DYNC2H1 Jun 01, 2017 MedGen:CN674505 Short-rib polydactyly syndrome type III paternal 11 103120525 GCCAGTGAAGAGAAAATCATATGCCTCACTCGAGTATTTGAACCTTTTACTGGCCTGAATC 1060501035 400257 NM_000138.4(FBN1):c.592C>T (p.Gln198Ter) FBN1 Dec 21, 2016 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006 Marfan syndrome germline 15 48537755 ACTGTGATCAGCAACCAGATGTGCCAGGGACAACTCAGCGGGATTGTCTGCACAAAAACGC 770284675 483118 NM_178170.2(NEK8):c.1384C>T (p.Arg462Ter) NEK8 Feb 14, 2018 MedGen:C3809434,OMIM:615415 Renal-hepatic-pancreatic dysplasia 2 germline 17 28739168 GCCTCTCACGTGCTGGCCCTGTCCACTGAGCGAGAACTATTTGCCTGGGGCCGTGGAGACA 118192150 76897 NM_000540.2(RYR1):c.14677C>T (p.Arg4893Trp) RYR1 May 11, 2010 MedGen:C0751951,OMIM:117000,Orphanet:ORPHA597,SNOMED CT:43152001;MedGen:CN517202 Central core disease;not provided unknown 19 38584973 TGTTACCTGTTTCACATGTACGTGGGTGTCCGGGCTGGCGGAGGCATTGGGGACGAGATCG 372174845 264411 NM_017780.3(CHD7):c.3655C>T (p.Arg1219Ter) CHD7 Dec 28, 2015 MedGen:C0265354,OMIM:214800,Orphanet:ORPHA138,SNOMED CT:47535005;MedGen:CN517202 CHARGE association;not provided germline;unknown 8 60830454 GAGCTAACAAACATTCAGAAGAAATATTACCGAGCCATCCTTGAGAAGAATTTCACATTTC 753698250 225801 NM_000709.3(BCKDHA):c.940C>T (p.Arg314Ter) BCKDHA Jan 01, 2011 MedGen:C0024776,OMIM:248600,SNOMED CT:27718001 Maple syrup urine disease germline 19 41422715 TTTGCCGTATACAACGCCACAAAGGAGGCCCGACGGCGGGCTGTGGCAGAGAACCAGCCCT 398124471 102246 NM_133433.3(NIPBL):c.7219C>T (p.Arg2407Ter) NIPBL Apr 07, 2017 MedGen:CN029798,OMIM:122470 Cornelia de Lange syndrome 1 germline 5 37052522 TCCATGATCCGTGGAAACCGCCAACACAGACGAGCCTTTCTTATTTCTTTACTCAACCTCT 121964897 27233 NM_001166120.1(HSD3B2):c.1022C>T (p.Pro341Leu) HSD3B2 Apr 01, 2008 MedGen:C0342471,OMIM:201810,SNOMED CT:54470008 3 beta-Hydroxysteroid dehydrogenase deficiency germline 1 119422523 AGAAGGCTCAGCGAGATCTGGCGTATAAGCCACTCTACAGCTGGGAGGAAGCCAAGCAGAA 398123773 100186 NM_003494.3(DYSF):c.2311C>T (p.Gln771Ter) DYSF Apr 08, 2013 MedGen:C1850889,OMIM:253601,Orphanet:ORPHA268;MedGen:C1850808,OMIM:254130,Orphanet:ORPHA45448 Limb-girdle muscular dystrophy, type 2B;Miyoshi muscular dystrophy 1 germline 2 71561900 GGCCACAGTGAGCTCCCTGCAGCTCTGGAGCAGGCGGAGGACTGGCTCCTGCGTCTGCGTG 886039222 259248 NM_001204.6(BMPR2):c.1469C>T (p.Ala490Val) BMPR2 Jul 11, 2016 MedGen:C0152171,OMIM:178600,SNOMED CT:26174007 Primary pulmonary hypertension germline 2 202552771 TCGAAGACTGTTGGGACCAGGATGCAGAGGCTCGGCTTACTGCACAGTGTGCTGAGGAAAG 61749387 15328 NM_000552.4(VWF):c.3922C>T (p.Arg1308Cys) VWF May 01, 2010 MedGen:CN517202;MedGen:C1282971,Orphanet:ORPHA166087 not provided;von Willebrand disease, type 2b germline 12 6019496 GCCTTTGTGGTGGACATGATGGAGCGGCTGCGCATCTCCCAGAAGTGGGTCCGCGTGGCCG 769603144 414368 NM_001204.6(BMPR2):c.2737C>T (p.Q913*) BMPR2 - MedGen:C0152171,OMIM:178600,SNOMED CT:26174007 Primary pulmonary hypertension germline 2 202556402 AATAACAACAACAGCAATCCATGTTCAGAACAAGATGTTCTTGCACAGGGTGTTCCAAGCA 72648326 414011 NM_000088.3(COL1A1):c.1243C>T (p.Arg415Ter) COL1A1 Jun 21, 2017 MedGen:C0023931,OMIM:166200,SNOMED CT:385482004;MedGen:CN517202 Osteogenesis imperfecta type I;not provided germline;paternal 17 50195288 ATTGCTGGTGCTCCTGGCTTCCCTGGTGCCCGAGGCCCCTCTGGACCCCAGGGCCCCGGCG 119468005 18676 NM_020247.4(COQ8A):c.637C>T (p.Arg213Trp) COQ8A Jun 07, 2016 MedGen:C2677589,OMIM:612016,Orphanet:ORPHA139485 Coenzyme Q10 deficiency, primary, 4 germline 1 226965719 GAGCGGAAGGTGCCTGTGACGAGGATTGGCCGGCTGGCCAACTTCGGAGGTAAGGTGGCTG 80356688 33900 NM_000083.2(CLCN1):c.847C>T (p.Leu283Phe) CLCN1 Apr 12, 2011 MedGen:C0027127,Orphanet:ORPHA206973 Myotonia congenita not provided 7 143324486 GTGGGAGTCGGCTGTTGTTTTGGGACACCACTTGGAGGCAAGTGATTGACCCCCTCCCCCA 483353070 143141 NM_001164342.2(ZBTB20):c.1861C>T (p.Leu621Phe) ZBTB20 Aug 01, 2014 MedGen:C0796121,OMIM:259050,Orphanet:ORPHA3042 Primrose syndrome de novo;germline 3 114339370 TGTTGGCGCTCCTTCTCCTTAAAGGATTACCTTATCAAGCACATGGTGACACACACAGGAG 143312232 186842 NM_001360.2(DHCR7):c.461C>T (p.Thr154Met) DHCR7 Apr 07, 2017 MedGen:C0175694,OMIM:270400,Orphanet:ORPHA818,SNOMED CT:43929004 Smith-Lemli-Opitz syndrome germline;unknown 11 71441392 AGATCAATGGCCTGCAAGCCTGGCTCCTCACGCACCTGCTCTGGTTTGCAAACGCTCATCT 121918176 15936 NM_000181.3(GUSB):c.1831C>T (p.Arg611Trp) GUSB Jan 01, 1993 MedGen:C0085132,OMIM:253220,Orphanet:ORPHA584 Mucopolysaccharidosis type VII germline 7 65961022 GTGCTGGGGAATAAAAAGGGGATCTTCACTCGGCAGAGACAACCAAAAAGTGCAGCGTTCC 756231749 440687 NM_000091.4(COL4A3):c.4825C>T (p.Arg1609Ter) COL4A3 Aug 19, 2016 MedGen:CN517202 not provided germline 2 227310845 GCCTCCCCTGGCTCCTGCCTGGAAGAATTCCGAGCCAGCCCATTTCTAGAATGTCATGGAA 797045200 206605 NM_024531.4(SLC52A2):c.700C>T (p.Gln234Ter) SLC52A2 Mar 17, 2015 MedGen:C3553538,OMIM:614707 Brown-Vialetto-Van Laere syndrome 2 germline 8 144360192 GTACCCACAGGGGAGTTAGGATCAGGCCTCCAGGTGGGAGCCCCAGGAGCAGAGGAAGAGG 397514400 36395 NM_000060.4(BTD):c.1106C>T (p.Pro369Leu) BTD Dec 04, 2012 MedGen:C0220754,OMIM:253260,Orphanet:ORPHA79241,SNOMED CT:8808004 Biotinidase deficiency not provided 3 15644962 GTAAGTTTTTAAAAATTTTGTCAGGCGATCCGTACTGTGAGAAGGATGCTCAGGAAGTCCA 387906848 39258 NM_004656.3(BAP1):c.2050C>T (p.Gln684Ter) BAP1 Feb 23, 2017 MedGen:C3280492,OMIM:614327,Orphanet:ORPHA289539;MedGen:CN517202 Tumor susceptibility linked to germline BAP1 mutations;not provided germline 3 52402608 TTCATCTGCACCTTTATCTCCATGCTGGCTCAGGAAGGTGAGGGGATGCGCTGCTGTCTTA 794728403 197153 NM_000238.3(KCNH2):c.3040C>T (p.Arg1014Ter) KCNH2 Dec 25, 2016 MeSH:D008133,MedGen:C0023976,SNOMED CT:9651007;MedGen:CN517202 Long QT syndrome;not provided germline 7 150947440 AGTCGGGGCCGCCAGTACCAGGAGCTCCCTCGATGCCCCGCCCCCACCCCCAGCCTCCTCA 387907139 40164 NM_018838.4(NDUFA12):c.178C>T (p.Arg60Ter) NDUFA12 Nov 01, 2011 MedGen:C1838951 Leigh syndrome due to mitochondrial complex I deficiency germline 12 94994249 AAATGTTCATCTTCCCACCCAGGCCGTCACCGATGGGTTGTATATACTACTGAAATGAATG 794726781 187708 NM_001165963.1(SCN1A):c.5461C>T (p.Gln1821Ter) SCN1A Dec 20, 2014 MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002 Severe myoclonic epilepsy in infancy de novo 2 165991814 GTTTGGGAGAAGTTTGATCCCGATGCAACTCAGTTCATGGAATTTGAAAAATTATCTCAGT 397514741 75278 NM_006772.2(SYNGAP1):c.427C>T (p.Arg143Ter) SYNGAP1 Jan 05, 2015 MedGen:C2675473,OMIM:612621 Mental retardation, autosomal dominant 5 germline 6 33432724 CTGAGCCGACGGCTAAAAAGCTCCATCAAACGAACGAAGTCACAACCCAAACTTGACCGGA 797045282 207384 NM_020732.3(ARID1B):c.5404C>T (p.Arg1802Ter) ARID1B Jun 25, 2014 MedGen:C3281201,OMIM:614562 Mental retardation, autosomal dominant 12 germline 6 157206545 GTCAAAAAGAACAACCTGTTTGTTGTTGACCGATCTGACAAGTTGGGGCGTGTGCAGGAGT 876659825 460605 NM_000051.3(ATM):c.3382C>T (p.Gln1128Ter) ATM Apr 25, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005 Ataxia-telangiectasia syndrome germline 11 108279588 ACAGCTTTTGAAAATGCATACTTGAAAGCTCAGGAAGGAATGAGAGAAATGGTAATTTTAA 137852626 24403 NM_000215.3(JAK3):c.1333C>T (p.Arg445Ter) JAK3 Jan 01, 2000 MedGen:C1833275,OMIM:600802,Orphanet:ORPHA35078 Severe combined immunodeficiency, autosomal recessive, T cell-negative, B cell-positive, NK cell-negative germline 19 17839585 ACAGGAACCTTCCTTCTGGTTGGCCTCAGCCGACCCCACAGCAGTCTTCGAGAGCTCCTGG 397509425 75124 NM_021971.2(GMPPB):c.553C>T (p.Arg185Cys) GMPPB May 23, 2017 MedGen:CN229783,Orphanet:ORPHA370953;MedGen:C3809216,OMIM:615350;MedGen:C3809221,OMIM:615351;MedGen:C3809221,OMIM:615351;MedGen:C3714932,OMIM:615352,Orphanet:ORPHA363623;MedGen:C3714932,OMIM:615352,Orphanet:ORPHA363623 Muscular dystrophy-dystroglycanopathy;Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type a, 14;Muscular dystrophy-dystroglycanopathy (congenital with mental retardation), type b, 14;Muscular dystrophy-dystroglycanopathy (congenital with mental retardation), type b, 14;Muscular dystrophy-dystroglycanopathy (limb-girdle), type c, 14;Muscular dystrophy-dystroglycanopathy (limb-girdle), type c, 14 germline;unknown 3 49722604 ATGTACATCCTGAGCCCTGCAGTGCTGCAGCGCATCCAGGTGTGTAGGAGACAGCTGTTGG -1 482101 NM_002968.2(SALL1):c.814C>T (p.Gln272Ter) SALL1 Nov 27, 2017 MedGen:CN517202 not provided germline 16 51141408 GCAGACTTGCCAACATCTTCTAGTCCTTCTCAAGGTACTTTACGAACATCTGCCAACCCCT 63750502 96736 NM_000251.2(MSH2):c.970C>T (p.Gln324Ter) MSH2 Sep 05, 2013 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:CN517202 Lynch syndrome;not provided germline;unknown 2 47416323 TAGGGTTCTGTTGAAGATACCACTGGCTCTCAGTCTCTGGCTGCCTTGCTGAATAAGTGTA 797044810 204267 NM_000084.4(CLCN5):c.1039C>T (p.Arg347Ter) CLCN5 Mar 29, 2016 MedGen:C1848336,OMIM:300009;MedGen:CN517202 Dent disease 1;not provided germline X 50086562 ATCCGCACAAACATTGCCTGGTGTCGGAAGCGAAAGACCACCCAGTTGGGCAAGTATCCTG 1056396947 389231 NM_001142769.2(PCDH15):c.4726C>T (p.Gln1576Ter) PCDH15 Jun 04, 2016 MedGen:C1836027,OMIM:609533 Deafness, autosomal recessive 23 germline 10 53809339 GGAATCGTTGACCTTGAGGGTGAAGAGTGGCAGAGACGCCTTGAGGAAGAAGATAAAGATT 121908490 20808 NM_003919.2(SGCE):c.304C>T (p.Arg102Ter) SGCE Apr 28, 2017 MedGen:C1834570,OMIM:159900,Orphanet:ORPHA36899,SNOMED CT:439732004 Myoclonic dystonia germline 7 94628288 ATGGGTTACCCAGACCGACCTGGATGGCTTCGATATATCCAAAGGACACCATATAGTGATG 28942095 18458 NM_006147.3(IRF6):c.1198C>T (p.Arg400Trp) IRF6 Sep 01, 2010 MedGen:C0175697,OMIM:119300,SNOMED CT:79261008 Van der Woude syndrome germline 1 209788626 TGTCCTGAACAGGTCATTCCAGTAGTGGCTCGGATGATCTACGAGATGTTTTCTGGTGATT -1 481695 NM_000094.3(COL7A1):c.7462C>T (p.Gln2488Ter) COL7A1 Oct 18, 2016 MedGen:CN517202 not provided germline 3 48570157 ACCATCCAGGGTGAAGATGGCCGCCCCGGCCAGGAGGGACCCCGAGGACTCACGGTGGGTC 587784154 168227 NM_022455.4(NSD1):c.5740C>T (p.Arg1914Cys) NSD1 May 26, 2016 MedGen:CN035106,OMIM:117550;MedGen:CN517202 Sotos syndrome 1;not provided germline 5 177280682 CCCTGTGGGATAGACTCTGAATGCATCAACCGCATGCTGCTCTATGAGTGCCACCCCACAG 387907039 39827 NM_024306.4(FA2H):c.703C>T (p.Arg235Cys) FA2H Apr 01, 2010 MedGen:C3668943,OMIM:612319,Orphanet:ORPHA329308 Spastic paraplegia 35 germline 16 74719071 CTCTGGAGCCTCATCGAGTACCTCATCCACCGCTTCCTGTTCCACATGAAGCCCCCCAGCG 587784571 168031 NM_014795.3(ZEB2):c.904C>T (p.Arg302Ter) ZEB2 Jun 15, 2017 MedGen:C1856113,OMIM:235730,Orphanet:ORPHA2152;MedGen:CN517202 Mowat-Wilson syndrome;not provided germline;unknown 2 144401211 AAATATAAACACCATCTGAAAGAACACCTGCGAATTCACAGTGGTGAGTAGCAGAGGTGCT 777830265 260248 NM_006031.5(PCNT):c.1843C>T (p.Gln615Ter) PCNT Jun 04, 2015 MedGen:CN517202 not provided germline 21 46355533 CTGGAAGCGCTGGAGTCTCCCCTCTGCATCCAGCACGAGGGGCATGTCTCAGACAGATGCT 771853367 448447 NM_000642.2(AGL):c.3652C>T (p.Arg1218Ter) AGL Nov 08, 2016 MedGen:C0017922,OMIM:232400,Orphanet:ORPHA308684,SNOMED CT:66937008 Glycogen storage disease type III germline 1 99902746 ATGCAAAAACACATGCAGGGCATACAGTTCCGAGAAAGGAATGCTGGTCCCCAGATAGATC 28937899 34562 NM_025136.3(OPA3):c.415C>T (p.Gln139Ter) OPA3 Mar 31, 2009 MedGen:C0574084,OMIM:258501,Orphanet:ORPHA67047,SNOMED CT:297232009 3-Methylglutaconic aciduria type 3 not provided 19 45553639 CTGGCGCTGGCGCTGGAAGCGCTGCAGGCGCAGGTGCAGGCGGCGCCGCCACAGGGCGCCC 137852845 17704 NM_182760.3(SUMF1):c.979C>T (p.Arg327Ter) SUMF1 May 16, 2003 MedGen:C0268263,OMIM:272200,Orphanet:ORPHA585,SNOMED CT:54898003 Multiple sulfatase deficiency germline 3 4376365 CTGTAGAAAGGTCCCCCTTCTGGGAAAGACCGAGTGAAGAAAGGTGGATCCTACATGTGCC 796052976 201580 NM_001165963.1(SCN1A):c.1348C>T (p.Gln450Ter) SCN1A Mar 31, 2017 MedGen:CN517202 not provided germline 2 166046799 AAAGAGGCCGAATTTCAGCAGATGATTGAACAGCTTAAAAAGCAACAGGAGGCAGCTCAGG 112989722 31488 NM_000138.4(FBN1):c.6354C>T (p.Ile2118=) FBN1 Jun 07, 2017 MedGen:CN229799;MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:CN118826,Orphanet:ORPHA91387;MedGen:CN517202 Marfan Syndrome/Loeys-Dietz Syndrome/Familial Thoracic Aortic Aneurysms and Dissections;Marfan syndrome;Thoracic aortic aneurysm and aortic dissection;not provided germline 15 48437347 CCAGATATGTCCTTATGGAAGTGGGATCATCGTGGGACCTGATGATTCAGCAGTTGGTCAG -1 447253 NM_170707.3(LMNA):c.877C>T (p.Gln293Ter) LMNA Apr 21, 2017 MedGen:CN043576 Charcot-Marie-Tooth disease, type 2 germline 1 156135253 AACCTGGTGGGGGCTGCCCACGAGGAGCTGCAGCAGTCGCGCATCCGCATCGACAGCCTCT 61752411 105067 NM_000350.2(ABCA4):c.2948C>T (p.Thr983Ile) ABCA4 May 31, 2017 MedGen:CN517202 not provided germline 1 94044715 GGTCCATCCTGACGGGTCTGTTGCCACCAACCTCTGGGACTGTGCTCGTTGGGGGAAGGGA 80356681 33855 NM_000228.2(LAMB3):c.727C>T (p.Gln243Ter) LAMB3 Sep 16, 2016 MedGen:C0079683,OMIM:226700,Orphanet:ORPHA79404,SNOMED CT:400140006;MedGen:CN517202 Junctional epidermolysis bullosa gravis of Herlitz;not provided germline 1 209632678 CACCCTCCCAGCGCCTACTATGCTGTGTCCCAGCTCCGTCTGCAGGGGAGCTGCTTCTGTC 121909775 22805 NM_032977.3(CASP10):c.769C>T (p.Gln257Ter) CASP10 Jun 01, 2002 Human Phenotype Ontology:HP:0012539,MedGen:C0024305,OMIM:605027,Orphanet:ORPHA547,SNOMED CT:1929004;Human Phenotype Ontology:HP:0006753,MeSH:D013274,MedGen:C0038356,OMIM:613659,SNOMED CT:126824007 Malignant lymphoma, non-Hodgkin;Neoplasm of stomach somatic 2 201205929 GGTGCACCAAGCCTGGTCTCCAGGGGGATGCAAGGAGCATCTGCTAACACTCTAAACTCTG 1131692042 423405 NM_006013.4(RPL10):c.191C>T (p.Ala64Val) RPL10 Jul 05, 2017 MedGen:CN298079,OMIM:300998 MENTAL RETARDATION, X-LINKED, SYNDROMIC, 35 germline X 154399803 CACTTTGCTGCTTTTCTTCTCCCTACCTAGCCCTGGAGGCTGCCCGAATTTGTGCCAATAA 772872014 259341 NM_001242896.1(DEPDC5):c.727C>T (p.Arg243Ter) DEPDC5 Apr 13, 2016 Gene:50987,MedGen:C1858477,OMIM:604364 Epilepsy, familial focal, with variable foci 1 germline 22 31792777 GAATTTCCTGAAATAAACCGAGCCTCAATTCGACAGGATCACAAGGGGAGATTCTATGAAG 754242209 260023 NM_000424.3(KRT5):c.1675C>T (p.Arg559Ter) KRT5 Jul 20, 2016 MedGen:CN517202 not provided germline 12 52515040 GGGGGCTCTGGCTTCAGTGCAAGCAGTGGCCGAGGGCTGGGGGTGGGCTTTGGCAGTGGCG 147195031 44782 NM_000138.4(FBN1):c.7726C>T (p.Arg2576Cys) FBN1 Feb 23, 2017 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:C4016059;MedGen:CN118826,Orphanet:ORPHA91387 Marfan syndrome;Marfan syndrome;Marfan syndrome, autosomal recessive;Thoracic aortic aneurysm and aortic dissection germline 15 48420780 TCAGACGTGGACGAGTGTGAGGGTAACCACCGCTGCCAGCATGGCTGCCAGAACATCATTG 398124536 102378 NM_144997.5(FLCN):c.346C>T (p.Gln116Ter) FLCN Jan 20, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0346010,OMIM:135150,Orphanet:ORPHA122,SNOMED CT:110985001;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Multiple fibrofolliculomas;not provided germline 17 17226226 TACGTCAGCCACCAGCACCCCAGCCACCCCCAGCTCTTCAGCATTGTCCGCCAGGCCTGTG 112645512 178700 NM_000138.4(FBN1):c.1285C>T (p.Arg429Ter) FBN1 Feb 24, 2017 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:CN118826,Orphanet:ORPHA91387;MedGen:CN517202 Marfan syndrome;Thoracic aortic aneurysm and aortic dissection;not provided germline 15 48516225 TTTCCTCCTGGACCTCAAATTCCGGTCCCTCGACCACCAGTGGAATATCTGTATCCATCTC 72547551 213917 NM_003119.3(SPG7):c.1715C>T (p.Ala572Val) SPG7 Jul 31, 2017 MedGen:C1846564,OMIM:607259,Orphanet:ORPHA99013;MedGen:CN517202 Spastic paraplegia 7;not provided germline 16 89550545 TCCTGTCCAAGGAAGAACAGAAAGTGGTTGCGTTTCATGAGTCGGGCCACGCCTTGGTGGG 398122995 98152 NM_015120.4(ALMS1):c.1900C>T (p.Gln634Ter) ALMS1 - MedGen:C0268425,OMIM:203800,Orphanet:ORPHA64,SNOMED CT:63702009;MedGen:CN517202 Alstrom syndrome;not provided germline 2 73448424 TCACATAGAGAGAAGCCTGGTACTTTTTACCAACAAGAGTTACCAGAGAGTAACTTAACCG 61046466 29516 NM_170707.3(LMNA):c.16C>T (p.Gln6Ter) LMNA Jun 02, 2011 MedGen:C0410190,OMIM:181350,Orphanet:ORPHA98853,SNOMED CT:240072005;EFO:EFO_0000407,Human Phenotype Ontology:HP:0001644,MedGen:C0007193,Orphanet:ORPHA217604,SNOMED CT:195021004;MedGen:CN517202 Benign scapuloperoneal muscular dystrophy with cardiomyopathy;Primary dilated cardiomyopathy;not provided germline 1 156114934 GCCAACCTGCCGGCCATGGAGACCCCGTCCCAGCGGCGCGCCACCCGCAGCGGGGCGCAGG 397518474 94315 NM_004667.5(HERC2):c.1781C>T (p.Pro594Leu) HERC2 Feb 01, 2013 MedGen:C3809753,OMIM:615516,Orphanet:ORPHA329195 Mental retardation, autosomal recessive 38 germline 15 28265707 TTGAAGGCTCCAGTGAGGACGAGGCCATTCCGATGCTGGTAGCCGGGCTTAAAGGACTGAA 104894364 27627 NM_004985.4(KRAS):c.173C>T (p.Thr58Ile) KRAS Jul 13, 2017 MeSH:D009634,MedGen:C0028326,Orphanet:ORPHA648,SNOMED CT:205824006;MedGen:C1860991,OMIM:609942;MedGen:CN517202 Noonan syndrome;Noonan syndrome 3;not provided germline 12 25227351 GAGAAACCTGTCTCTTGGATATTCTCGACACAGCAGGTCAAGAGGAGTACAGTGCAATGAG 587783137 166521 NM_004992.3(MECP2):c.568C>T (p.Arg190Cys) MECP2 Jun 12, 2015 MedGen:CN517202 not provided germline X 154031260 AAAGCTCCAGGAACTGGCAGAGGCCGGGGACGCCCCAAAGGGAGCGGCACCACGAGACCCA 202088921 190414 NM_003060.3(SLC22A5):c.136C>T (p.Pro46Ser) SLC22A5 Nov 07, 2017 MedGen:C0342788,OMIM:212140,Orphanet:ORPHA158,SNOMED CT:21764004;MedGen:CN517202;MedGen:CN169374 Renal carnitine transport defect;not provided;not specified germline;unknown 5 132370108 GGCCTGTCCTCCGTGTTCCTGATAGCGACCCCGGAGCACCGCTGCCGGGTGCCGGACGCCG 587777343 132644 NM_005861.3(STUB1):c.737C>T (p.Thr246Met) STUB1 Feb 15, 2014 MedGen:C4014261,OMIM:615768,Orphanet:ORPHA412057 Spinocerebellar ataxia, autosomal recessive 16 germline 16 682232 GCTTTGAGCTGATGCGGGAGCCGTGCATCACGCCCAGTGGCATCACCTACGACCGCAAGGA 796052652 203725 NM_172107.3(KCNQ2):c.1682C>T (p.Pro561Leu) KCNQ2 Mar 31, 2016 MedGen:C3150986,OMIM:613720,Orphanet:ORPHA439218;MedGen:CN517202 Early infantile epileptic encephalopathy 7;not provided germline 20 63413531 CCAAGCGGAAGTTCAAGGAGAGCCTGCGGCCCTACGACGTGATGGACGTCATCGAGCAGTA 1085307111 362584 NM_033068.2(ACP4):c.746C>T (p.Pro249Leu) ACP4 Oct 28, 2016 MedGen:C4310630,OMIM:617297 Amelogenesis imperfecta, type IJ germline 19 50793784 CTTTGGATATTGGAGCCCACGTGGGCCCACCCCGGGCAGCAGAGAAGGCCCAGCTGACAGG 17221854 18181 NM_000218.2(KCNQ1):c.1747C>T (p.Arg583Cys) KCNQ1 Oct 18, 2013 MedGen:C1843738;MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MedGen:C0035828,OMIM:192500,Orphanet:ORPHA101016,SNOMED CT:20852007;MedGen:CN517202 Acquired susceptibility to long QT syndrome 1;Congenital long QT syndrome;Long QT syndrome 1;not provided germline 11 2777990 GTTTTATCCCCCATAGAAAAGAGCAAGGATCGCGGCAGCAACACGATCGGCGCCCGCCTGA 387907006 39727 NM_005461.4(MAFB):c.209C>T (p.Ser70Leu) MAFB Mar 09, 2012 MedGen:C2674705,OMIM:166300,Orphanet:ORPHA2774 Multicentric osteolysis nephropathy germline 20 40688642 TCAGCACTCCGTGTAGCTCCGTGCCCTCGTCGCCCAGCTTCAGCCCGACCGAACAGAAGAC 797044520 200407 NM_001396.3(DYRK1A):c.1399C>T (p.Arg467Ter) DYRK1A Jul 13, 2017 MedGen:C3279839,OMIM:614104,Orphanet:ORPHA464306;MedGen:CN517202 Mental retardation, autosomal dominant 7;not provided de novo;germline 21 37505442 TTAAGGATGCTTGATTATGACCCCAAAACTCGAATTCAACCTTATTATGCTCTGCAGCACA 312262794 49684 NM_024408.3(NOTCH2):c.1180C>T (p.Pro394Ser) NOTCH2 Feb 28, 2013 MedGen:C1857761,OMIM:610205,Orphanet:ORPHA261629 Alagille syndrome 2 not provided 1 119968161 TGCCACAAGGGGGCACTGTGTGACACCAACCCCCTAAATGGGCAATATATTTGCACCTGCC 886041341 265007 NM_000430.3(PAFAH1B1):c.337C>T (p.Arg113Ter) PAFAH1B1 Sep 26, 2016 MedGen:CN517202 not provided germline 17 2667136 GCATTGAGTGGTCACAGGAGTCCAGTCACTCGAGTCATTTTCCATCCTGTGTTCAGTGTTA 121917871 15497 NM_000097.5(CPOX):c.85C>T (p.Gln29Ter) CPOX Nov 16, 1998 MedGen:C0342856,SNOMED CT:190915002 Coproporphyria germline 3 98593420 GGCGGCTGCGGAGGGCCCCGCGCCTGGTCCCAGTGCGGCGGCGGAGGGCTCCGAGCCTGGT 754032480 201638 NM_001165963.1(SCN1A):c.82C>T (p.Arg28Cys) SCN1A May 29, 2013 MedGen:CN517202 not provided germline 2 166073540 ACCAGAGAATCTCTTGCGGCTATTGAAAGACGCATTGCAGAAGAAAAGGCAAAGAATCCCA 121909071 22017 NM_183233.2(SLC22A18):c.698C>T (p.Ser233Phe) SLC22A18 Sep 15, 1998 MedGen:C0684249,OMIM:211980,SNOMED CT:187875007 Lung cancer somatic 11 2918030 CCAGTGTGTTCGACCTGAAGGCCATCGCCTCCCTGCTGCGGCTGCCAGACGTCCCGAGGAT -1 444572 NM_001005463.2(EBF3):c.469C>T (p.His157Tyr) EBF3 Aug 04, 2017 MedGen:CN517202 not provided germline 10 129958950 AACCCGGAGATGTGCCGTGTGCTGCTGACCCACGAGATCATGTGCAGGTGAGCGGCGGGCG 886042154 265649 NM_004006.2(DMD):c.5032C>T (p.Gln1678Ter) DMD Jun 17, 2015 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Duchenne muscular dystrophy germline X 32364704 ATGGTATGTCTCTGTACAATTAAGGAATACCAGAAACACATGGAAACTTTTGACCAGAATG 121913637 29143 NM_000257.3(MYH7):c.2155C>T (p.Arg719Trp) MYH7 Aug 01, 2017 MedGen:CN230736;MedGen:C3495498,OMIM:192600;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Cardiovascular phenotype;Familial hypertrophic cardiomyopathy 1;Primary familial hypertrophic cardiomyopathy;not provided germline 14 23425971 TTCCCCAACCGCATCCTCTACGGGGACTTCCGGCAGAGGTGGGTATGAGGGTGCACCAGAG 281874705 35905 NM_000495.4(COL4A5):c.2782C>T (p.Gln928Ter) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108622690 CACACATTGATTTTAGGTGATGATGGCTTGCAGGGTCAGCCAGGACTTCCTGGCCCTACAG 761451474 362091 NM_014855.2(AP5Z1):c.616C>T (p.Arg206Trp) AP5Z1 Jan 26, 2017 MedGen:C3150901,OMIM:613647,Orphanet:ORPHA306511 Spastic paraplegia 48, autosomal recessive germline 7 4783793 TCCGGCGGCTTCTTCTCCACGCCCAGGGCCCGGCAGGTGAGGCTGGGACTGTTCTGGAACC 886042983 269161 NM_004006.2(DMD):c.457C>T (p.Gln153Ter) DMD Dec 14, 2015 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Duchenne muscular dystrophy germline X 32816541 TGGGTCCGACAATCAACTCGTAATTATCCACAGGTTAATGTAATCAACTTCACCACCAGCT 753529924 485766 NM_001042492.2(NF1):c.541C>T (p.Gln181Ter) NF1 Sep 25, 2015 MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003 Neurofibromatosis, type 1 germline 17 31169952 AATGTTGATGTTCATGATATAGAATTGTTACAGTATATCAATGTGGATTGTGCAAAATTAA 587783613 170127 NM_006579.2(EBP):c.328C>T (p.Arg110Ter) EBP Feb 08, 2013 MedGen:C0282102,OMIM:302960,Orphanet:ORPHA35173 Chondrodysplasia punctata 2 X-linked dominant germline X 48527015 TCAGGGAAAGAGTATGCCAAGGGAGACAGCCGATACATCCTGTAAGTGTTTGCCTCTGTCA 886039802 260918 NM_033028.4(BBS4):c.172C>T (p.Gln58Ter) BBS4 - MedGen:C0752166,OMIM:209900,Orphanet:ORPHA110,SNOMED CT:5619004 Bardet-Biedl syndrome germline 15 72712259 TTCTCCCTCTTTCAGGCTGTTATCAAAGAACAGCTTCAAGAGACTCAGGGATTGTGTGAAT 1085307443 414421 NM_001013703.3(EIF2AK4):c.3244C>T (p.Q1082*) EIF2AK4 - MedGen:C0340848,OMIM:234810,SNOMED CT:234161007 Familial pulmonary capillary hemangiomatosis germline 15 40003201 TATTTTTTCTCATTTGGTGTAGGAGCTGTTCAGTTGTGTACTCCACTACTGCTTCCCCGAA 370432633 39318 NM_003921.4(BCL10):c.488C>T (p.Thr163Met) BCL10 Nov 23, 2011 Gene:8093,MedGen:C0153594,OMIM:273300,SNOMED CT:363449006 Malignant tumor of testis somatic 1 85267841 TGTACCATCCAGAAGGAGAATCCAGCACGACGCCCTTTTTTTCTACTAATTCTTCTCTGAA 387906514 27514 NM_003239.4(TGFB3):c.*495C>T TGFB3 Feb 01, 2005 MedGen:C1862511,OMIM:107970 Arrhythmogenic right ventricular dysplasia, familial 1 germline 14 75958692 CATTTTTTTTTTTTTTTTAAAGACAGGTTACGAAGACAAAGTCCCAGAATTGTATCTCATA 121917856 23909 NM_002181.3(IHH):c.137C>T (p.Pro46Leu) IHH Apr 01, 2003 MedGen:C1843096,OMIM:607778,Orphanet:ORPHA63446 Acrocapitofemoral dysplasia germline 2 219060331 GCCGCCGGCGACCGCCACGCAAACTCGTGCCGCTCGCCTACAAGCAGTTCAGCCCCAATGT 28937569 22520 NM_001540.4(HSPB1):c.545C>T (p.Pro182Leu) HSPB1 Jan 15, 2006 MedGen:C2608087,OMIM:608634 Distal hereditary motor neuronopathy type 2B germline 7 76304100 TAGCCACGCAGTCCAACGAGATCACCATCCCAGTCACCTTCGAGTCGCGGGCCCAGCTTGG 397514862 75742 NM_000368.4(TSC1):c.2389C>T (p.Gln797Ter) TSC1 May 23, 2017 MedGen:C1854465,OMIM:191100;MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000;MedGen:CN517202 Tuberous sclerosis 1;Tuberous sclerosis syndrome;not provided germline 9 132902607 GAGGAATTCTACAACCAGAGCCAGGAATTACAGGTATAAACTGCAGCACCAGGCAAAGCCA 757106110 409327 NM_005902.3(SMAD3):c.1102C>T (p.Arg368Ter) SMAD3 Aug 24, 2017 MedGen:CN118826,Orphanet:ORPHA91387;MedGen:CN517202 Thoracic aortic aneurysm and aortic dissection;not provided germline 15 67187457 CAGGGCTTTGAGGCTGTCTACCAGTTGACCCGAATGTGCACCATCCGCATGAGCTTCGTCA 796052458 202805 NM_005249.4(FOXG1):c.217C>T (p.Gln73Ter) FOXG1 Dec 17, 2013 MedGen:CN517202 not provided germline 14 28767496 CCGCAACCGCCGCCGCCGCCGCAGCAGCAGCAGCCGCCGCCGCCGCCGCCCCCGGCACCGC 184474885 172155 NM_004208.3(AIFM1):c.1030C>T (p.Leu344Phe) AIFM1 Aug 01, 2015 Gene:751798,MedGen:C1845095,OMIM:300614,Orphanet:ORPHA139583 Deafness, X-linked 5 germline;unknown X 130137123 TTCCCCGAGAAAGGAAATATGGGAAAGATCCTCCCCGAATACCTCAGCAACTGGACCATGG 199470484 59482 NM_012330.3(KAT6B):c.5389C>T (p.Arg1797Ter) KAT6B Apr 01, 2013 MedGen:C1863557,OMIM:603736,Orphanet:ORPHA3047;MedGen:CN517202 Young Simpson syndrome;not provided germline;unknown 10 75030213 ACGAGCAACGCCAACATTGGCTTATACGAGCGAATGGGTCAGAGTGATTTTGGGGCTGGGC 786201042 181998 NM_000179.2(MSH6):c.10C>T (p.Gln4Ter) MSH6 Aug 09, 2017 Human Phenotype Ontology:HP:0012114,MedGen:C0476089,OMIM:608089,SNOMED CT:254878006;MedGen:C0027672,SNOMED CT:699346009;MedGen:C0009405,Orphanet:ORPHA443090;MedGen:C1833477,OMIM:614350;MedGen:C1833477,OMIM:614350;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:C0265325,OMIM:276300,Orphanet:ORPHA252202,SNOMED CT:61665008;MedGen:CN517202 Endometrial carcinoma;Hereditary cancer-predisposing syndrome;Hereditary nonpolyposis colon cancer;Hereditary nonpolyposis colorectal cancer type 5;Hereditary nonpolyposis colorectal cancer type 5;Lynch syndrome;Turcot syndrome;not provided germline;unknown 2 47783243 TGGGCCTTGCCGGCTGTCGGTATGTCGCGACAGAGCACCCTGTACAGCTTCTTCCCCAAGT 72554330 103031 NM_000531.5(OTC):c.232C>T (p.Gln78Ter) OTC - MedGen:CN517202 not provided unknown X 38369811 GTCCTTGATTTATAGTATTTGCCTTTATTGCAAGGGAAGTCCTTAGGCATGATTTTTGAGA -1 427468 NM_001009944.2(PKD1):c.8095C>T (p.Gln2699Ter) PKD1 May 03, 2016 MedGen:C0085548,OMIM:263200,Orphanet:ORPHA731,SNOMED CT:28770003 Autosomal recessive polycystic kidney disease germline 16 2104564 CACAAGCTGGAGGCCATGATGCTCATCCTGCAGGCAGAGACCACCGCGGGCACCGTGACGC 879255531 247390 NM_024757.4(EHMT1):c.673C>T (p.Arg225Ter) EHMT1 Jul 14, 2016 MedGen:C0795833,OMIM:610253,Orphanet:ORPHA261494;MedGen:CN517202 Chromosome 9q deletion syndrome;not provided de novo;germline 9 137728379 CATGCAGCCAGTAAAGATCCCAGAGAAGTTCGAGAAGCTAGAGATCATAAGGAACCAAAAG 398123012 49924 NM_020944.2(GBA2):c.1888C>T (p.Arg630Trp) GBA2 Mar 07, 2017 MedGen:C0037773,Orphanet:ORPHA685,SNOMED CT:39912006;MedGen:C2828721,OMIM:614409,Orphanet:ORPHA320391 Hereditary spastic paraplegia;Spastic paraplegia 46, autosomal recessive germline;inherited 9 35738811 CTGAACCTGAAGTTTGTGCTGCAGGTTTATCGGGACTATTACCTCACGGGTGATCAAAACT 587779607 107070 NM_000090.3(COL3A1):c.976C>T (p.Arg326Ter) COL3A1 Mar 06, 2017 MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000;MedGen:CN517202 Ehlers-Danlos syndrome, type 4;not provided germline 2 188992208 TTTTAGGGTGCTCGGGGTAATGACGGTGCTCGAGGCAGTGATGGTCAACCAGTAAGTAACT -1 445961 NM_030632.2(ASXL3):c.3964C>T (p.Gln1322Ter) ASXL3 Sep 08, 2017 MedGen:CN517202 not provided germline 18 33743812 TCCAGCATATCAAGCTCCATGGATGATAAGCAGTTACTAATATCAAGCAGCAGTGCTAGTA 768509996 445981 NM_017653.4(DYM):c.208C>T (p.Arg70Ter) DYM Oct 31, 2017 MedGen:CN517202 not provided germline 18 49379744 TTTTCTTCTCTTGCAGTTGAAAACAATCCTCGAACAGGAAATCTTGGTGCACTAATTAAGG 397515558 76600 NM_005629.3(SLC6A8):c.1631C>T (p.Pro544Leu) SLC6A8 Aug 18, 2011 MedGen:C1845862,OMIM:300352,Orphanet:ORPHA52503 Creatine deficiency, X-linked not provided X 153694753 TCTTCATCTTCAACGTTGTGTACTACGAGCCGCTGGTCTACAACAACACCTACGTGTACCC 794727293 192482 NM_017780.3(CHD7):c.469C>T (p.Arg157Ter) CHD7 Feb 17, 2017 MedGen:C0265354,OMIM:214800,Orphanet:ORPHA138,SNOMED CT:47535005;MedGen:CN517202;MedGen:CN169374 CHARGE association;not provided;not specified germline 8 60741901 CCCAGGGCTGTTCAGGTACCAGACCAGATACGAGCCCCCTACCAGCAGCAGCAGCCACAGC -1 454970 NM_001182.4(ALDH7A1):c.796C>T (p.Arg266Ter) ALDH7A1 Jul 27, 2017 MedGen:C1849508,OMIM:266100 Pyridoxine-dependent epilepsy germline 5 126568334 CCTTGCAGCACAGCAATGGCCAAAGATGAACGAGTGAACCTGCTGTCCTTCACTGGGAGCA 149150736 200682 NM_138413.3(HOGA1):c.907C>T (p.Arg303Cys) HOGA1 Nov 27, 2014 MedGen:C3150878,OMIM:613616,Orphanet:ORPHA93600 Primary hyperoxaluria, type III germline 10 97611582 GACTGGTTTGGCTACTATGGAGGCCCCTGCCGCGCCCCCTTGCAGGAGCTGAGCCCCGCTG 121918115 32845 NM_004320.4(ATP2A1):c.2366C>T (p.Pro789Leu) ATP2A1 May 01, 2000 MedGen:C1832918,OMIM:601003,Orphanet:ORPHA53347 Brody myopathy germline 16 28902228 CTGCCCTGGGGCTGCCTGAGGCCCTGATCCCGGTGCAGCTGCTATGGGTGAACTTGGTGAC 398123008 48177 NM_003647.2(DGKE):c.127C>T (p.Gln43Ter) DGKE Feb 01, 2013 MedGen:C3554330,OMIM:615008 Nephrotic syndrome, type 7 germline 17 56834922 CCGGTGTTCATCACCTTCTGGTGTAGCCTCCAGCGGTCGCGCCGGCAGCTGCACCGCAGGG 72554323 103020 NM_000531.5(OTC):c.179C>T (p.Ser60Leu) OTC - MedGen:CN517202 not provided unknown X 38367392 GAGAAGAAATTAAATATATGCTATGGCTATCAGCAGATCTGAAATTTAGGATAAAACAGAA 121434430 21728 NM_001081.3(CUBN):c.3890C>T (p.Pro1297Leu) CUBN Jul 15, 2000 MedGen:C4016819;MedGen:C1306856,OMIM:261100,Orphanet:ORPHA35858,SNOMED CT:34925000 Megaloblastic anemia 1, Finnish type;Megaloblastic anemia due to inborn errors of metabolism germline 10 17041160 CCTATGGCATCTTAGAGAGTATAGGGTATCCGAATCCTTATTCTGAAAATCAGCATTGCAA 281874753 36126 NM_000495.4(COL4A5):c.5020C>T (p.Arg1674Ter) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108696340 GAAACGCTGAAAGCAGGAGACTTGAGGACACGAATTAGCCGATGTCAAGTGTGCATGAAGA 869025309 223670 NM_001002020.2(PUS1):c.799C>T (p.Arg267Trp) PUS1 Feb 10, 2016 MedGen:C1838103,OMIM:600462 Myopathy, lactic acidosis, and sideroblastic anemia 1 germline 12 131941630 AAGGGCCAGAGCTTCATGATGCATCAGATCCGGAAGATGGTCGGCCTGGTGGTGGCCATTG 535289422 227199 NM_002016.1(FLG):c.7189C>T (p.Gln2397Ter) FLG Mar 18, 2016 MedGen:C0079584,OMIM:146700 Ichthyosis vulgaris germline 1 152307697 GGACAGGCTGGGCCCCATCAGCAGAGCCACCAAGAGTCCACACGTGGCCGGTCAGCAGGAA 104894433 24310 NM_000161.2(GCH1):c.262C>T (p.Arg88Trp) GCH1 Apr 28, 1995 MedGen:C1851920,OMIM:128230,Orphanet:ORPHA255 Dystonia 5, Dopa-responsive type germline 14 54902402 ATCCTGAGCTCGCTGGGCGAGAACCCCCAGCGGCAAGGGCTGCTCAAGACGCCCTGGAGGG 367543005 34105 NM_000048.3(ASL):c.1060C>T (p.Gln354Ter) ASL Sep 09, 2016 MedGen:C0268547,OMIM:207900,Orphanet:ORPHA23,SNOMED CT:41013004;MedGen:CN517202 Argininosuccinate lyase deficiency;not provided germline;unknown 7 66089693 CAGGTGGCCACTGGCGTCATCTCTACGCTGCAGGCAAGACATCACCCCCCTGCTTCTCCTC 121908810 68139 NM_000492.3(CFTR):c.2290C>T (p.Arg764Ter) CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline;unknown 7 117592457 GTGATCAGCACTGGCCCCACGCTTCAGGCACGAAGGAGGCAGTCTGTCCTGAACCTGATGA -1 442441 NM_000166.5(GJB1):c.64C>T (p.Arg22Ter) GJB1 Mar 22, 2017 MedGen:CN517202 not provided germline X 71223771 GGCGTGAACCGGCATTCTACTGCCATTGGCCGAGTATGGCTCTCGGTCATCTTCATCTTCA 28939378 19763 NM_019109.4(ALG1):c.773C>T (p.Ser258Leu) ALG1 Mar 16, 2017 MedGen:C2931005,OMIM:608540,Orphanet:ORPHA79327;MeSH:D030342,MedGen:C0950123;MedGen:CN517202 Congenital disorder of glycosylation type 1K;Inborn genetic diseases;not provided germline;paternal 16 5078789 CAGAACCTGAGGACCCAGTCACGGAGCGGTCGGCCTTCACGGAGCGGGATGCTGGGAGCGG 193302876 28762 NM_001083116.2(PRF1):c.1246C>T (p.Gln416Ter) PRF1 May 01, 2003 MedGen:C1863727,OMIM:603553 Hemophagocytic lymphohistiocytosis, familial, 2 germline 10 70598475 GACTGCTGCCCTCGGCAGAGGGGCCTGGCCCAGCTGGAGGTGACCTTCATCCAAGCATGGG 387906704 38894 NM_003688.3(CASK):c.316C>T (p.Arg106Ter) CASK Sep 12, 2017 MedGen:C2677903,OMIM:300749,Orphanet:ORPHA163937;MedGen:CN517202 Mental retardation and microcephaly with pontine and cerebellar hypoplasia;not provided germline X 41745564 GGAGCAGATCTGTGTTTTGAAATCGTAAAGCGAGCTGACGCTGGTTTTGTGTACAGTGAAG 137962226 426484 NM_018684.3(ZC4H2):c.592C>T (p.Arg198Trp) ZC4H2 Jun 08, 2017 MedGen:CN517202 not provided germline X 64917866 GCCTGCTTGTCATGTCACCAGCAAATTCACCGGAATGCACCTATATGCCCTCTTTGCAAGG 80356694 32576 NM_000083.2(CLCN1):c.1439C>T (p.Pro480Leu) CLCN1 Apr 12, 2011 MedGen:C2936781,OMIM:160800,SNOMED CT:57938005;MedGen:C0027127,Orphanet:ORPHA206973 Congenital myotonia, autosomal dominant form;Myotonia congenita germline 7 143339290 TGTCCATCGTGGCCACCACTATGCCCATACCCTGCGGAGGCTTCATGCCTGTGTTTGTGCT 387906784 39092 NM_001142784.2(IL11RA):c.886C>T (p.Arg296Trp) IL11RA Jul 15, 2011 MedGen:C3280073,OMIM:614188,Orphanet:ORPHA284149 Craniosynostosis and dental anomalies germline 9 34659834 GGGCTGCCCCATGCTGTACGAGTCAGTGCCCGGGACTTTCTAGATGCTGGCACCTGGAGCA 876657624 214845 NM_005709.3(USH1C):c.7C>T (p.Arg3Ter) USH1C Apr 01, 2015 MedGen:C1848604,OMIM:276904 Usher syndrome, type 1C inherited 11 17544301 GACGCAGCTGGACCTGGCCCAGCCATGGACCGAAAAGTGGCCCGAGAATTCCGGCATAAGG 122453113 26735 NM_005629.3(SLC6A8):c.1540C>T (p.Arg514Ter) SLC6A8 Jun 01, 2001 MedGen:C1845862,OMIM:300352,Orphanet:ORPHA52503 Creatine deficiency, X-linked germline X 153694577 ATGGACGACATTGCCTGTATGATCGGGTACCGACCTTGCCCCTGGATGAAATGGTGCTGGT -1 455881 NM_000426.3(LAMA2):c.1300C>T (p.Arg434Ter) LAMA2 Aug 30, 2016 MedGen:CN117977 Laminin alpha 2-related dystrophy germline 6 129165669 GAAGTCTGTGTCAAGGATGAGAAACATGCTCGACGAGGTGAGAGCTGCAGCAGAATGTCAC 5030818 17256 NM_000551.3(VHL):c.481C>T (p.Arg161Ter) VHL Aug 30, 2017 MedGen:C0027672,SNOMED CT:699346009;Human Phenotype Ontology:HP:0005584,MeSH:D002292,MedGen:C0007134,OMIM:605074,Orphanet:ORPHA217071,SNOMED CT:41607009;MedGen:C0019562,OMIM:193300,Orphanet:ORPHA892,SNOMED CT:46659004;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Renal cell carcinoma, papillary, 1;Von Hippel-Lindau syndrome;not provided germline;somatic;unknown 3 10149804 TTTGCCCTTCCAGTGTATACTCTGAAAGAGCGATGCCTCCAGGTTGTCCGGAGCCTAGTCA 377626365 481280 NM_177452.3(TRAPPC6B):c.124C>T (p.Arg42Ter) TRAPPC6B Feb 02, 2018 MedGen:CN787271,OMIM:617862 NEURODEVELOPMENTAL DISORDER WITH MICROCEPHALY, EPILEPSY, AND BRAIN ATROPHY germline 14 39159508 TGTATTACTAAGCTGGAAAACATGGGGTTTCGAGTGGGACAAGGATTGATAGAAAGGTGAG 281865109 39632 NM_024747.5(HPS6):c.815C>T (p.Thr272Ile) HPS6 Dec 01, 2009 MedGen:C3888007,OMIM:614075 Hermansky-Pudlak syndrome 6 germline 10 102066289 TGTCCCCCAGGGAGCCACTGGCTGTACACACCTGGGCCCCAACTCCCCAGGGCCTGCTGTT -1 433063 NM_000118.3(ENG):c.511C>T (p.Arg171Ter) ENG May 11, 2017 MedGen:C0039445,OMIM:187300,Orphanet:ORPHA774,SNOMED CT:21877004;MedGen:CN169374 Osler hemorrhagic telangiectasia syndrome;not specified germline 9 127826522 GAGCTGAATGACCCCCAGAGCATCCTCCTCCGACTGGGCCAAGGTCAGTTTCCCCAGCAAC 74315310 29865 NM_000566.3(FCGR1A):c.274C>T (p.Arg92Ter) FCGR1A Mar 15, 1995 MedGen:C4016211 IGG receptor I, phagocytic, familial deficiency of germline 1 149784224 GAATACAGGTGCCAGAGAGGTCTCTCAGGGCGAAGTGACCCCATACAGCTGGAAATCCACA 121918623 27922 NM_006920.4(SCN1A):c.2591C>T (p.Thr864Met) SCN1A Apr 01, 2000 MedGen:C1858672,OMIM:604233;MedGen:C1858673,OMIM:604403 Generalized epilepsy with febrile seizures plus, type 1;Generalized epilepsy with febrile seizures plus, type 2 germline 2 166038098 GAGTTTTCAAGTTGGCAAAATCTTGGCCAACGTTAAATATGCTAATAAAGATCATCGGCAA 587777481 143175 NM_001424.5(EMP2):c.184C>T (p.Gln62Ter) EMP2 Jun 05, 2014 MedGen:C4014507,OMIM:615861,Orphanet:ORPHA69061 Nephrotic syndrome, type 10 germline 16 10538060 TGCCCTTTTCCCGCAGAGTACTCCACGCTGCAGGCGGTCCAGGCCACCATGATCCTCTCCA -1 484638 NM_024675.3(PALB2):c.3067C>T (p.Gln1023Ter) PALB2 Sep 26, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 16 23621408 ATACTAACTTTTGCTGAGGTCCAAGGGATGCAAGAAGCTCTGCTTGGTACTACTATTATGA 137852737 15369 NM_001034850.2(RETREG1):c.433C>T (p.Gln145Ter) RETREG1 Nov 23, 2010 MedGen:C2752089,OMIM:201300;MedGen:C2751092,OMIM:613115 Hereditary sensory and autonomic neuropathy type IIA;Hereditary sensory and autonomic neuropathy type IIB germline 5 16565788 CACATTTTGCTTCTCCCTGTTGCAGGTGCACAGTTGTGGAGAAGCCTCAGTGAAAGGTAGG 886039259 259350 NM_001242896.1(DEPDC5):c.1114C>T (p.Gln372Ter) DEPDC5 Apr 13, 2016 Gene:50987,MedGen:C1858477,OMIM:604364 Epilepsy, familial focal, with variable foci 1 germline 22 31804194 ATTGGTGTGGATTTGGTGTGCATGGGAGAGCAACCGTTACATGCTGTCCCATTGTTCAAGG 61753219 214063 NM_000287.3(PEX6):c.821C>T (p.Pro274Leu) PEX6 Oct 01, 2015 MedGen:C4225267,OMIM:616617 Heimler syndrome 2 germline 6 42978330 AGCCCCTCGCTGACGGACTGGCGCTTGTCCCTGCCACTTTGGCTTTTAATCTTGGCTGTGA 886042019 264982 NM_013275.5(ANKRD11):c.7234C>T (p.Gln2412Ter) ANKRD11 Jul 11, 2017 MedGen:CN517202 not provided germline 16 89279308 ACGTCCACGCAGCAGACGCGGGAGGTGATCCAGCAGACGCTGGCCGCCATCGTGGACGCCA 267607508 188160 NM_002055.4(GFAP):c.1193C>T (p.Ser398Phe) GFAP Jan 08, 2015 MedGen:C0270726,OMIM:203450,Orphanet:ORPHA58,SNOMED CT:81854007 Alexander's disease germline 17 44908128 CATCTGCAGAAACCAGCCTGGACACCAAGTCTGTGTCAGAAGGCCACCTCAAGAGGAACAT 781784543 186807 NM_001164277.1(SLC37A4):c.742C>T (p.Gln248Ter) SLC37A4 Jul 28, 2016 MedGen:C0268146,OMIM:232220,SNOMED CT:30102006;MedGen:CN517202 Glucose-6-phosphate transport defect;not provided germline;unknown 11 119026979 GGAGTAAAGACCTGCTGTACTGACTGGGGCCAGTTCTTCCTTATCCAGGAGAAAGGACAGT 201889294 76993 NM_012160.4(FBXL4):c.1303C>T (p.Arg435Ter) FBXL4 Aug 10, 2017 MedGen:C3809592,OMIM:615471,Orphanet:ORPHA369897 Mitochondrial DNA depletion syndrome 13 (encephalomyopathic type) germline 6 98899282 TTATGCAGCCTTAAACGACTTGTTCTCTATCGAACAAAAGTAGAGGTGAGAGTAATTCATA 397514540 48182 NM_000146.3(FTL):c.89C>T (p.Thr30Ile) FTL Feb 01, 2013 MedGen:C1833213,OMIM:600886,Orphanet:ORPHA163 Hyperferritinemia cataract syndrome germline 19 48965596 TGGTCAATTTGTACCTGCAGGCCTCCTACACCTACCTCTCTCTGGTGAGTCCCCAGGACGC 281860601 30074 NM_000559.2(HBG1):c.-167C>T HBG1 Mar 01, 1991 MedGen:C1841621,OMIM:141749 Fetal hemoglobin quantitative trait locus 1 germline 11 5249971 CACCCATGGGTTGGCCAGCCTTGCCTTGACCAATAGCCTTGACAAGGCAAACTTGACCAAT 80356904 68978 NM_007294.3(BRCA1):c.1621C>T (p.Gln541Ter) BRCA1 Apr 17, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145;MedGen:CN517202 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome;not provided germline 17 43093910 ATGATAAATCAGGGAACTAACCAAACGGAGCAGAATGGTCAAGTGATGAATATTACTAATA 773009397 245137 NM_181882.2(PRX):c.1174C>T (p.Arg392Ter) PRX Aug 25, 2015 MedGen:CN517202 not provided germline 19 40397178 CCTGAGGCCAGGGTGAAAGGTCCCAGACTTCGAATGCCCACCTTTGGGCTTTCCCTCTTGG 397515522 76497 NM_000370.3(TTPA):c.175C>T (p.Arg59Trp) TTPA Jun 27, 2013 MedGen:C1848533,OMIM:277460,Orphanet:ORPHA96 Ataxia with vitamin E deficiency not provided 8 63085847 GACTCCTTCCTGCTGCGGTTCCTGCGCGCCCGGGATTTCGATCTGGACCTGGCCTGGCGGG 766034355 199928 NM_145207.2(SPATA5):c.1343C>T (p.Ser448Leu) SPATA5 Sep 03, 2015 MedGen:C4225276,OMIM:616577,Orphanet:ORPHA457351 Epilepsy, hearing loss, and mental retardation syndrome germline 4 122938134 CATTTTACTTGTTTGTTTTTAGACACCCATCAATTATTTTTATTGATGAGCTGGATGCACT 121912709 33037 NM_001182.4(ALDH7A1):c.596C>T (p.Ala199Val) ALDH7A1 Mar 01, 2006 MedGen:C1849508,OMIM:266100 Pyridoxine-dependent epilepsy germline 5 126577133 GAATCATCACGGCATTCAATTTCCCTGTGGCAGTGTATGGTTGGAACAACGCCATCGCCAT 756998699 200052 NM_000387.5(SLC25A20):c.10C>T (p.Gln4Ter) SLC25A20 Feb 28, 2017 MedGen:CN517202 not provided germline 3 48898785 GGAGTGACAGACGGACTGACCATGGCCGACCAGCCAAAACCCATCAGCCCGCTCAAGAACC -1 430983 NM_020920.3(CHD8):c.2887C>T (p.Arg963Ter) CHD8 Sep 14, 2016 MedGen:C3554373,OMIM:615032 Autism, susceptibility to, 18 de novo 14 21402494 TTCGTTTTTATTTTAAACCAGGCCCAGGCACGATGTCATCGAATTGGGCAGAGCAAAGCTG 121918313 21306 NM_002336.2(LRP6):c.1831C>T (p.Arg611Cys) LRP6 Mar 02, 2007 MedGen:C1970440,OMIM:610947 Coronary artery disease, autosomal dominant 2 germline 12 12164494 CATCTCTGCCTCTATAGACCTCAGGGCCTTCGCTGTGCTTGCCCTATTGGCTTTGAACTCA 387907094 40031 NM_017775.3(TTC19):c.517C>T (p.Gln173Ter) TTC19 Mar 01, 2011 MedGen:C3554605,OMIM:615157 Mitochondrial complex III deficiency, nuclear type 2 germline 17 16003885 ATGAGTTACCTCCTTGGAGGGGGCATGAAGCAGGTAAGGACATTGCCTAGTATTGGCCCCT 80338931 34548 NM_024577.3(SH3TC2):c.2710C>T (p.Arg904Ter) SH3TC2 Feb 26, 2016 MedGen:C1866636,OMIM:601596,Orphanet:ORPHA99949;MedGen:CN043578 Charcot-Marie-Tooth disease, type 4C;Charcot-Marie-Tooth disease, type IV germline 5 149027022 CCAGCCAGAAACTATCTCCTGCAGGCTGTACGACTCTATTGTGAACTTCAGGCCAGTAAGG 1064796738 408021 NM_004523.3(KIF11):c.247C>T (p.Arg83Ter) KIF11 May 25, 2017 MedGen:CN517202 not provided germline 10 92606655 GGAGCATCTACTAAACAGATTGATGTTTACCGAAGTGTTGTTTGTCCAATTCTGGATGAAG 751502842 199277 NM_001256850.1(TTN):c.45160C>T (p.Arg15054Ter) TTN May 20, 2017 MedGen:C1858763,OMIM:604145;MedGen:CN517202 Dilated cardiomyopathy 1G;not provided germline 2 178612442 AACTACATTGTGGAAAAGAGAGACGTCAGGCGAAAAGGCTGGCAAACAGTGGATACCACTG 61751367 153459 NM_004992.3(MECP2):c.889C>T (p.Gln297Ter) MECP2 Sep 05, 2002 MedGen:C0035372,OMIM:312750,Orphanet:ORPHA778,SNOMED CT:68618008 Rett syndrome de novo X 154030939 GCCGTGAAGGAGTCTTCTATCCGATCTGTGCAGGAGACCGTACTCCCCATCAAGAAGCGCA 111033690 18657 NM_000155.3(GALT):c.404C>T (p.Ser135Leu) GALT May 18, 2017 MedGen:C0268151,OMIM:230400,Orphanet:ORPHA79239,SNOMED CT:124354006;MedGen:CN517202;MedGen:CN169374 Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase;not provided;not specified germline;unknown 9 34647858 CCAGTAAGGTCATGTGCTTCCACCCCTGGTCGGATGTAACGCTGCCACTCATGTCGGTCCC 121917749 27915 NM_001040142.1(SCN2A):c.3988C>T (p.Leu1330Phe) SCN2A Sep 14, 2002 MedGen:C1843140,OMIM:607745,Orphanet:ORPHA140927 Benign familial neonatal-infantile seizures germline 2 165374700 CTCATCCTGTGCCAGGTTGTTGTAAATGCTCTTTTAGGAGCCATTCCATCTATCATGAATG 387906697 38873 NM_004612.3(TGFBR1):c.1240C>T (p.Arg414Ter) TGFBR1 Sep 20, 2016 MedGen:C0546476,OMIM:132800,Orphanet:ORPHA65748;MedGen:CN118826,Orphanet:ORPHA91387 Multiple self healing squamous epithelioma;Thoracic aortic aneurysm and aortic dissection germline 9 99146594 ATGGGCTTAGTATTCTGGGAAATTGCTCGACGATGTTCCATTGGTGGTAAATTGCTCTCCT 587784013 168483 NM_133433.3(NIPBL):c.6565C>T (p.Gln2189Ter) NIPBL Feb 08, 2013 MedGen:CN029798,OMIM:122470 Cornelia de Lange syndrome 1 germline 5 37046175 TATTTTACAAAACACTCAGATGAAGAAGTACAAACAAAAGCTATCATTGGTCTAGGTAAGT 878853170 237539 NM_024422.4(DSC2):c.1660C>T (p.Gln554Ter) DSC2 May 22, 2017 na;MedGen:CN517202 ARRHYTHMOGENIC RIGHT VENTRICULAR DYSPLASIA, FAMILIAL, 11, WITH OR WITHOUT MILD PALMOPLANTAR KERATODERMA;not provided germline 18 31079850 ATATATAATATTACAGTCCTTGCATCAGACCAAGGTAAGAATTTGTCTTTAAGCCAGCTAC 879254419 245394 NM_000527.4(LDLR):c.157C>T (p.Gln53Ter) LDLR Nov 05, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline;unknown 19 11100312 AAGTGGGTCTGCGATGGCAGCGCTGAGTGCCAGGATGGCTCTGATGAGTCCCAGGAGACGT 62625308 32710 NM_007294.3(BRCA1):c.3607C>T (p.Arg1203Ter) BRCA1 Jul 14, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;Human Phenotype Ontology:HP:0100013,MeSH:D001943,MedGen:C1458155,Orphanet:ORPHA180250,SNOMED CT:126926005;MedGen:CN517202 Breast-ovarian cancer, familial 1;Familial cancer of breast;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;Neoplasm of the breast;not provided germline;unknown 17 43091924 TTCACCCATACACATTTGGCTCAGGGTTACCGAAGAGGGGCCAAGAAATTAGAGTCCTCAG 879255035 246352 NM_000527.4(LDLR):c.1823C>T (p.Pro608Leu) LDLR Mar 25, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11116976 TCTTGGAGGATGAAAAGAGGCTGGCCCACCCCTTCTCCTTGGCCGTCTTTGAGGTGTGGCT 281865223 105590 NM_004183.3(BEST1):c.272C>T (p.Thr91Ile) BEST1 May 22, 2015 MedGen:CN517202 not provided germline 11 61955742 GCCCAGGCTTCTACGTGACGCTGGTCGTGACCCGCTGGTGGAACCAGTACGAGAACCTGCC 121434530 33202 NM_000262.2(NAGA):c.985C>T (p.Arg329Trp) NAGA Aug 01, 1994 MedGen:C1836522,OMIM:609242,Orphanet:ORPHA79280 Kanzaki disease germline 22 42061040 CAGGAAAAATCTCTCATCGAAGTGTACATGCGGCCTCTGTCCAACAAGGCTAGCGCCTTAG 1057519277 361769 NM_033068.2(ACP4):c.226C>T (p.Arg76Cys) ACP4 Jan 18, 2017 MedGen:C4310630,OMIM:617297 Amelogenesis imperfecta, type IJ germline 19 50790783 CTGAGGCTGTTCTGTCCCCAGGAGGGGGTCCGCCAGCAGCTGGAGCTGGGCCGCTTCCTGA 138996609 181608 NM_003000.2(SDHB):c.688C>T (p.Arg230Cys) SDHB Oct 05, 2017 MedGen:C1708353,Orphanet:ORPHA29072;MedGen:C0027672,SNOMED CT:699346009;MedGen:C1861848,OMIM:115310;MedGen:CN517202 Hereditary Paraganglioma-Pheochromocytoma Syndromes;Hereditary cancer-predisposing syndrome;Paragangliomas 4;not provided germline 1 17022685 ATTGACTCCAGAGATGACTTCACAGAGGAGCGCCTGGCCAAGCTGCAGGACCCATTCTCTC 1064793346 407437 NM_017780.3(CHD7):c.7879C>T (p.Arg2627Ter) CHD7 Feb 09, 2017 MedGen:CN517202 not provided germline 8 60862244 TTTTCCTCATTTCAGAAACCGAAACAGAAACGACATAGATGTCGAAACCCTAATAAATTGG 727504246 172499 NM_001001430.2(TNNT2):c.536C>T (p.Ser179Phe) TNNT2 Jul 22, 2016 MedGen:C1861864,OMIM:115195;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005 Familial hypertrophic cardiomyopathy 2;Primary familial hypertrophic cardiomyopathy germline 1 201363330 AGGATGAGGCCCGGAAGAAGAAGGCTTTGTCCAACATGATGCATTTTGGGGGTTACATCCA 761399728 248477 NM_006578.3(GNB5):c.242C>T (p.Ser81Leu) GNB5 Apr 12, 2017 Human Phenotype Ontology:HP:0007018,MedGen:C1263846,OMIM:143465,SNOMED CT:406506008;Human Phenotype Ontology:HP:0000750,MedGen:C0454644;Human Phenotype Ontology:HP:0001263,MedGen:C4020875;MedGen:C4310678,OMIM:617182;MedGen:CN517202 Attention deficit hyperactivity disorder;Delayed speech and language development;Global developmental delay;Language delay and attention deficit-hyperactivity disorder/cognitive impairment with or without cardiac arrhythmia;not provided germline 15 52153947 GGTGCAAAGATAAGAGGAGGATCGTGAGCTCGTCACAGGTATGTCACACCTGCTGCATAAC 794728849 196998 NM_198056.2(SCN5A):c.664C>T (p.Arg222Ter) SCN5A Jul 27, 2017 MedGen:C1142166,Orphanet:ORPHA130,SNOMED CT:418818005;MedGen:CN517202 Brugada syndrome;not provided germline 3 38613782 CTGGGCAATGTCTCAGCCTTACGCACCTTCCGAGTCCTCCGGGCCCTGAAAACTATATCAG 121909287 23290 NM_000020.2(ACVRL1):c.1231C>T (p.Arg411Trp) ACVRL1 Apr 23, 2017 MedGen:C1838163,OMIM:600376;MedGen:C1832529;MedGen:CN517202 Hereditary hemorrhagic telangiectasia type 2;Pulmonary arterial hypertension related to hereditary hemorrhagic telangiectasia;not provided germline 12 51916218 TTTGGCCTGGTGCTGTGGGAGATTGCCCGCCGGACCATCGTGAATGGTGAGGGCCCACCCT 180177124 132190 NM_024675.3(PALB2):c.2761C>T (p.Gln921Ter) PALB2 Jul 16, 2012 MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006 Familial cancer of breast germline 16 23624082 CTGCTTTGTTTTATTTAGGTTCCAGTATTACAGATAGTTCCAGTGCCTGATGTGTATAATC -1 438519 NM_005720.3(ARPC1B):c.314C>T (p.Ala105Val) ARPC1B Oct 26, 2017 MedGen:CN570504,OMIM:617718 PLATELET ABNORMALITIES WITH EOSINOPHILIA AND IMMUNE-MEDIATED INFLAMMATORY DISEASE germline 7 99388183 TCAACCGGGCTGCCCGCTGCGTGCGCTGGGCCCCCAACGAGAACAAGTTTGCTGTGGGCAG 202218890 268491 NM_001130987.1(DYSF):c.2929C>T (p.Arg977Trp) DYSF Nov 10, 2015 MedGen:C1850889,OMIM:253601,Orphanet:ORPHA268 Limb-girdle muscular dystrophy, type 2B germline 2 71569884 TTCGTGGAAGAGGTGTTTGAGAACCAGACCCGGCTTCCCGGAGGCCAGTGGATCTACATGA 113812345 51455 NM_000138.4(FBN1):c.1546C>T (p.Arg516Ter) FBN1 Aug 11, 2017 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:CN118826,Orphanet:ORPHA91387;MedGen:CN118826,Orphanet:ORPHA91387;MedGen:CN517202;MedGen:CN169374 Marfan syndrome;Marfan syndrome;Thoracic aortic aneurysm and aortic dissection;Thoracic aortic aneurysm and aortic dissection;not provided;not specified germline 15 48513591 AACAACCAGGGTTCGTACACCTGTCAGTGCCGAGCTGGATATCAGAGCACACTCACGCGGA 922930539 420015 NM_004928.2(C21orf2):c.347C>T (p.Pro116Leu) C21orf2 Jun 23, 2017 MedGen:C1865695,OMIM:602271,Orphanet:ORPHA168549 Spondylometaphyseal dysplasia axial germline 21 44333059 GCTACCGCATGACCGTGCTGCGCACCCTGCCGCGCCTACAGAAGCTGGACAACCAGGGTAG 267606754 19497 NM_004937.2(CTNS):c.416C>T (p.Ser139Phe) CTNS Oct 06, 2016 MedGen:CN035091,Orphanet:ORPHA213,SNOMED CT:190681003;MedGen:C2749685;MedGen:C0268626,OMIM:219900,Orphanet:ORPHA411634,SNOMED CT:22830006;MedGen:C0010690,OMIM:219800 Cystinosis;Cystinosis, atypical nephropathic;Juvenile nephropathic cystinosis;Nephropathic cystinosis germline;unknown 17 3655307 TGATTGGCTGGATCTACTTTGTGGCCTGGTCCATCTCCTTCTACCCTCAGGTGATCATGAA 761494650 185659 NM_007194.3(CHEK2):c.85C>T (p.Gln29Ter) CHEK2 May 27, 2017 MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Familial cancer of breast;Hereditary cancer-predisposing syndrome;not provided germline;unknown 22 28734637 TCACAGCCCCATGGCAGCGTTACCCAGTCCCAAGGCTCCTCCTCACAGTCCCAGGGCATAT 769426298 264464 NM_001130103.1(COL13A1):c.271C>T (p.Arg91Ter) COL13A1 Jun 28, 2016 MedGen:CN517202 not provided germline 10 69802694 GAGCAGCAAATGGAGACGGCTATTTTGGGACGAGTCAATCAACTGCTGGACGAGGTCTGTG 786203898 242858 NM_032043.2(BRIP1):c.2479C>T (p.Gln827Ter) BRIP1 Apr 03, 2017 MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C1836860,OMIM:609054;MedGen:C0027672,SNOMED CT:699346009 Familial cancer of breast;Fanconi anemia, complementation group J;Hereditary cancer-predisposing syndrome germline 17 61715964 TATGAAATTCAAGCATACAGGGCCTTAAACCAGGCCCTTGGTAGGTAAGTGGAGTGAAATT 869312841 226613 NM_006734.3(HIVEP2):c.2827C>T (p.Arg943Ter) HIVEP2 Jun 28, 2017 MedGen:C4310771,OMIM:616977 Mental retardation, autosomal dominant 43 germline 6 142771912 GAGAAGTTGCCACCCAAAAAGAAGCGTCTGCGACTTGCAGATATGGAGCACTCCTCAGGGG -1 441961 NM_002087.3(GRN):c.1072C>T (p.Gln358Ter) GRN Jun 05, 2017 MedGen:CN517202 not provided germline 17 44351688 GCCCCAGCTCACCTCAGCCTGCCAGACCCACAAGCCTTGAAGAGAGATGTCCCCTGTGATA 121918295 17751 NM_178443.2(FERMT3):c.1537C>T (p.Arg513Ter) FERMT3 May 07, 2009 MedGen:C2748536,OMIM:612840,Orphanet:ORPHA99844 Leukocyte adhesion deficiency, type III germline 11 64220649 CCCTACGGCCTCGTTGCCCCCCGTTTCCAGCGAAAGTTCAAGGCCAAGCAGGTACCAGAAG 746541266 237674 NM_000350.2(ABCA4):c.3871C>T (p.Gln1291Ter) ABCA4 Jan 01, 2016 MeSH:C535804,MedGen:C1855465,OMIM:248200 Stargardt disease 1 germline 1 94032035 TTAATTCAATCTCTCAAAACAGGTGGCGCTCAGCAGAAAAGAGAAAACGTCAACCCCCGAC 113994027 19159 NM_001034116.1(EIF2B4):c.683C>T (p.Ala228Val) EIF2B4 Feb 01, 2002 MedGen:C1858991,OMIM:603896,Orphanet:ORPHA99854 Leukoencephalopathy with vanishing white matter germline 2 27368047 TGGTCAGTGGCTCCAATGCCCGGTGTATTGCCCTGCTTCGTGCCTTGCAGCAGGTATGTCC 121907963 18944 NM_000520.5(HEXA):c.1177C>T (p.Arg393Ter) HEXA Oct 20, 2017 MedGen:C0039373,OMIM:272800,Orphanet:ORPHA845,SNOMED CT:111385000;MedGen:CN517202 Tay-Sachs disease;not provided germline 15 72346680 ATTCAGCCAGACACAATCATACAGGTGTGGCGAGAGGATATTCCAGTGAACTATATGAAGG 886043023 269372 NM_000266.3(NDP):c.325C>T (p.Arg109Ter) NDP Dec 04, 2015 MedGen:C0266526,OMIM:310600,SNOMED CT:15228007 Atrophia bulborum hereditaria germline X 43949876 CAGACTTCCAAGCTGAAGGCACTGCGGCTGCGATGCTCAGGGGGCATGCGACTCACTGCCA 397514473 39427 NM_021625.4(TRPV4):c.266C>T (p.Thr89Ile) TRPV4 Apr 02, 2014 MedGen:C0265281,OMIM:156530,Orphanet:ORPHA2635,SNOMED CT:22764001;Human Phenotype Ontology:HP:0002652,MedGen:C0410528,SNOMED CT:105986008 Metatrophic dysplasia;Skeletal dysplasia germline 12 109814531 TGCCCAACCCCATCGATCTGCTGGAGTCCACCCTATATGAGTCCTCGGTGGTGCCTGGGCC 1060501936 394765 NM_005732.3(RAD50):c.2467C>T (p.Arg823Ter) RAD50 Oct 24, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 5 132603989 GCAGCTAAGCTACAAGGAATAGACTTAGATCGAACTGTCCAACAAGTCAACCAGGAGAAAC 587784134 168207 NM_022455.4(NSD1):c.4987C>T (p.Arg1663Cys) NSD1 Feb 08, 2013 MedGen:CN035106,OMIM:117550 Sotos syndrome 1 germline 5 177260009 CCTGCTTTAGGTCGGTTGATGCGCTGTGTCCGCTGTCCTGTGGCATACCACGCCAATGACT 281875284 39467 NM_004738.4(VAPB):c.137C>T (p.Thr46Ile) VAPB Dec 17, 2010 MedGen:C1837728,OMIM:608627;MedGen:CN517202 Amyotrophic lateral sclerosis type 8;not provided germline 20 58418289 CAGACCGAAATGTGTGTTTTAAGGTGAAGACTACAGCACCACGTAGGTACTGTGTGAGGCC 387907197 40564 NM_001399.4(EDA):c.826C>T (p.Arg276Cys) EDA Dec 01, 2009 MedGen:C0162359,OMIM:305100,SNOMED CT:239007005 Hypohidrotic X-linked ectodermal dysplasia germline X 70033430 CTTTCAGGTGGAGTGCTCAATGACTGGTCTCGCATCACTATGAACCCCAAGGTGTTTAAGC 35578002 47287 NM_000518.4(HBB):c.90C>T (p.Gly30=) HBB Dec 07, 2016 MedGen:C0005283,OMIM:613985,Orphanet:ORPHA848,SNOMED CT:65959000 beta Thalassemia germline 11 5226932 CGTGGATGAAGTTGGTGGTGAGGCCCTGGGCAGGTTGGTATCAAGGTTACAAGACAGGTTT 587784098 168158 NM_022455.4(NSD1):c.3214C>T (p.Arg1072Ter) NSD1 Feb 08, 2013 MedGen:CN035106,OMIM:117550 Sotos syndrome 1 germline 5 177211613 GTGACTCTTGATGCTGTACTGCAGGGAGACCGAGAACGTGGAGGTTCATTGAGAGGTGGGG 28928910 29068 NM_006158.4(NEFL):c.64C>T (p.Pro22Ser) NEFL Dec 18, 2014 MedGen:C1843225,OMIM:607684,Orphanet:ORPHA99939;MedGen:C0270913,OMIM:601098,Orphanet:ORPHA101083,SNOMED CT:4183003;Human Phenotype Ontology:HP:0000762,MedGen:C1857640;Human Phenotype Ontology:HP:0009053,MedGen:C1836450;Human Phenotype Ontology:HP:0002460,MedGen:C1864696;Human Phenotype Ontology:HP:0009130,MedGen:C0239830;Human Phenotype Ontology:HP:0011096,MedGen:C0878575;Human Phenotype Ontology:HP:0009830,MedGen:C0442874;Human Phenotype Ontology:HP:0009830,MedGen:C0442874;Human Phenotype Ontology:HP:0001761,MedGen:C0728829;MedGen:CN517202 Charcot-Marie-Tooth disease type 2E;Charcot-Marie-Tooth disease, type 1C;Decreased nerve conduction velocity;Distal lower limb muscle weakness;Distal muscle weakness;Hand muscle atrophy;Peripheral demyelination;Peripheral neuropathy;Peripheral neuropathy;Pes cavus;not provided germline;unknown 8 24956452 ACCTCCTACAAGCGGCGCTACGTGGAGACGCCCCGGGTGCACATCTCCAGCGTGCGCAGCG -1 439618 NM_014991.4(WDFY3):c.7909C>T (p.Arg2637Trp) WDFY3 Jun 12, 2017 MedGen:CN251651,OMIM:617520 Microcephaly 18, primary, autosomal dominant germline 4 84715350 ATTGCTGTGGAAGTTTTCTCTGGAGATGGACGGAATTACCTCCTTGCTTTTCAGAAAGGAA 374402066 17280 NM_000433.3(NCF2):c.304C>T (p.Arg102Ter) NCF2 Oct 01, 1999 MedGen:C1856245,OMIM:233710 Chronic granulomatous disease, autosomal recessive cytochrome b-positive, type 2 germline 1 183577661 AAAGACCTTAAAGAAGCCTTGATTCAGCTTCGAGGGAACCAGCTGATAGACTATAAGATCC 587776973 59810 NM_001242896.1(DEPDC5):c.1663C>T (p.Arg555Ter) DEPDC5 Mar 16, 2017 Gene:50987,MedGen:C1858477,OMIM:604364 Epilepsy, familial focal, with variable foci 1 germline 22 31815209 GTCAGCAGCTCCTTGGGATACACCAGCACTCGAGGTAAGAGTGCTGAAGCACAGACAGAGC 104894068 16217 NM_000497.3(CYP11B1):c.956C>T (p.Thr319Met) CYP11B1 Oct 01, 1997 MedGen:C0268292,OMIM:202010,Orphanet:ORPHA90795,SNOMED CT:124214007 Deficiency of steroid 11-beta-monooxygenase germline 8 142875877 GTCTGACCCTGCAGCTGTGTCTCCTGCAGACGGTGTTTCCCTTGCTGATGACGCTCTTTGA 886044351 274356 NM_015384.4(NIPBL):c.6082C>T (p.Gln2028Ter) NIPBL Sep 01, 2016 MedGen:CN029798,OMIM:122470 Cornelia de Lange syndrome 1 germline 5 37038712 CAGCTCATGGTTAAACATGCAATGACTATGCAACCATACCTTACCACTAAATGTAGTGTAA 137854532 30971 NM_000516.5(GNAS):c.493C>T (p.Arg165Cys) GNAS Jan 25, 2017 Human Phenotype Ontology:HP:0000852,MedGen:C0033806,OMIM:103580,Orphanet:ORPHA97593 Pseudohypoparathyroidism type 1A germline 20 58905443 GAGGATGAAGGAGTGCGTGCCTGCTACGAACGCTCCAACGAGTACCAGCTGATTGACTGTG 121918204 16115 NM_015272.4(RPGRIP1L):c.2050C>T (p.Gln684Ter) RPGRIP1L Feb 23, 2015 MedGen:C1969053,OMIM:611560 Joubert syndrome 7 germline;unknown 16 53652637 CAGAAGAATACTATCACCCTTGAGGTCCACCAGGCTTATAGCACAGAATATGAAACAATTG 104894614 21743 NM_005450.4(NOG):c.328C>T (p.Gln110Ter) NOG Sep 01, 2002 MedGen:C1866656,OMIM:184460,Orphanet:ORPHA140917 Stapes ankylosis with broad thumb and toes germline 17 56594551 GACCTGGCGGAGCTGGACCAGCTGCTGCGGCAGCGGCCGTCGGGGGCCATGCCGAGCGAGA 746873768 213808 NM_003494.3(DYSF):c.1834C>T (p.Gln612Ter) DYSF May 02, 2017 MedGen:C2931687,Orphanet:ORPHA207073;MedGen:C1850889,OMIM:253601,Orphanet:ORPHA268;MedGen:C1850808,OMIM:254130,Orphanet:ORPHA45448;MedGen:CN517202 Dysferlinopathy;Limb-girdle muscular dystrophy, type 2B;Miyoshi muscular dystrophy 1;not provided germline 2 71553092 ACCATGCTGCAGGATGTGGATGATGCCATCCAGTTTGAGGTCAGCATCGGGAACTACGGGA 876658658 231989 NM_001042492.2(NF1):c.31C>T (p.Gln11Ter) NF1 Mar 02, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline 17 31095340 ATGGCCGCGCACAGGCCGGTGGAATGGGTCCAGGCCGTGGTCAGCCGCTTCGACGAGCAGG 886041669 263961 NM_015100.3(POGZ):c.2350C>T (p.Arg784Ter) POGZ Mar 30, 2016 MedGen:CN517202 not provided germline 1 151408125 TCTCTGTGTCGCTATAGCACCTGCTGTTCTCGAGCTTATGCCAACCACATGATCAAGTAAG 199584830 238025 NM_001142564.1(CNGA1):c.1747C>T (p.Arg583Ter) CNGA1 Jan 01, 2015 Human Phenotype Ontology:HP:0000556,MedGen:C0854723,Orphanet:ORPHA71862,SNOMED CT:314407005;Human Phenotype Ontology:HP:0000547,MeSH:D012174,MedGen:C0035334,OMIM:268000,Orphanet:ORPHA791,SNOMED CT:28835009 Retinal dystrophy;Retinitis pigmentosa germline;unknown 4 47936954 GATTATATTTGCAAGAAAGGGGATATCGGACGAGAGATGTACATTATCAAGGAAGGCAAAC 387906320 19822 NM_025237.2(SOST):c.70C>T (p.Gln24Ter) SOST Mar 01, 2001 MedGen:CN032489,OMIM:269500 Sclerosteosis 1 germline 17 43758672 GTACACACAGCCTTCCGTGTAGTGGAGGGCCAGGGGTGGCAGGCGTTCAAGAATGATGCCA 1060499802 389243 NM_000260.3(MYO7A):c.6211C>T (p.Gln2071Ter) MYO7A Jun 04, 2016 MedGen:C1838701,OMIM:600060 Deafness, autosomal recessive 2 germline 11 77211311 CGGGAGCTGGTGCCCCAGGACCTTATCCGGCAGGTCTCACCTGATGACTGGAAGCGGGTGA 794728540 197507 NM_000218.2(KCNQ1):c.1801C>T (p.Gln601Ter) KCNQ1 Jun 11, 2012 MedGen:CN517202 not provided germline 11 2847773 TCTCGTCTGCCTTTGTCCCCGCAGGTGACGCAGCTGGACCAGAGGCTGGCACTCATCACCG 193922569 45121 NM_000527.4(LDLR):c.1978C>T (p.Gln660Ter) LDLR Jun 02, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000;MedGen:CN517202 Familial hypercholesterolemia;not provided germline 19 11120224 GAGGATATGGTTCTCTTCCACAACCTCACCCAGCCAAGAGGTAAGGGTGGGTCAGCCCCAC -1 445021 NM_003482.3(KMT2D):c.14194C>T (p.Gln4732Ter) KMT2D Aug 15, 2017 MedGen:CN517202 not provided germline 12 49029118 TTCCCTCATCTGGGCTCAGGCCGGTGGGAGCAAGAGGACCGGGCCCTCTCCCCTGTCATCC 137852700 23943 NM_000310.3(PPT1):c.451C>T (p.Arg151Ter) PPT1 Aug 10, 2017 MedGen:C1850451,OMIM:256730,Orphanet:ORPHA228329;MedGen:CN239323;MedGen:C0027877,OMIM:214200,Orphanet:ORPHA216,SNOMED CT:42012007;MedGen:CN517202 Ceroid lipofuscinosis neuronal 1;Neuronal Ceroid-Lipofuscinosis, Recessive;Neuronal ceroid lipofuscinosis;not provided germline;unknown 1 40089495 TCTACCACTGTAGGTGTTTTTGGACTCCCTCGATGCCCAGGAGAGAGCTCTCACATCTGTG 864309720 215756 NM_001143826.2(MAPRE2):c.298C>T (p.Arg100Cys) MAPRE2 Dec 03, 2015 MedGen:C4225225,OMIM:616734 Skin creases, congenital symmetric circumferential, 2 germline 18 35101976 GTAATTCCAGTGGAGAAGCTAGTGAAAGGACGTTTCCAGGACAACCTGGATTTTATTCAAT 80357136 69535 NM_007294.3(BRCA1):c.3403C>T (p.Gln1135Ter) BRCA1 Dec 01, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline 17 43092128 TCTCCATATCTGATTTCAGATAACTTAGAACAGCCTATGGGAAGTAGTCATGCATCTCAGG 1057519074 359059 NM_002444.2(MSN):c.511C>T (p.Arg171Trp) MSN Dec 15, 2016 MedGen:C4310812,OMIM:300988 Immunodeficiency 50 germline X 65731150 CACAAACTCAACAAGGACCAGTGGGAGGAGCGGATCCAGGTGTGGCATGAGGAACACCGTG 41293455 32714 NM_007294.3(BRCA1):c.4327C>T (p.Arg1443Ter) BRCA1 Aug 18, 2017 MedGen:C2676676,OMIM:604370;MedGen:C2676676,OMIM:604370;MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:C3280442,OMIM:614320;MedGen:CN517202;MedGen:CN169374 Breast-ovarian cancer, familial 1;Breast-ovarian cancer, familial 1;Familial cancer of breast;Familial cancer of breast;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;Pancreatic cancer 4;not provided;not specified germline;unknown 17 43082434 ATAAGTGACTCTTCTGCCCTTGAGGACCTGCGAAATCCAGAACAAAGCACATCAGAAAAAG 181509591 214059 NM_020041.2(SLC2A9):c.374C>T (p.Thr125Met) SLC2A9 Mar 01, 2012 MedGen:C2677549,OMIM:612076 Renal hypouricemia 2 germline 4 9996817 CCATATTCGCCATCGGTGGACTTGTGGGGACGTTAATTGTGAAGATGATTGGAAAGGTTCT 771742823 424264 NM_153240.4(NPHP3):c.424C>T (p.Arg142Ter) NPHP3 - MedGen:C1858392,OMIM:604387,SNOMED CT:444749006 Adolescent nephronophthisis biparental 3 132719800 GCACTTCAAAAAACGTATCAGAAGATACTTCGAGAAAAAGAAAGTGCTTTAGAAGCGAAAT 121909580 32537 NM_000744.6(CHRNA4):c.839C>T (p.Ser280Phe) CHRNA4 Sep 11, 2015 MedGen:C1838049,OMIM:600513;MedGen:CN517202 Epilepsy, nocturnal frontal lobe, type 1;not provided germline 20 63350572 AGTGTGGCGAGAAGATCACGCTGTGCATCTCCGTGCTGCTGTCGCTCACCGTCTTCCTGCT 1057517945 359836 NM_004281.3(BAG3):c.268C>T (p.Arg90Ter) BAG3 Mar 02, 2017 MedGen:C3151293,OMIM:613881;MedGen:CN517202 Dilated cardiomyopathy 1HH;not provided germline 10 119669938 AGGGAAGGCCACCCTGTGTACCCCCAGCTCCGACCAGGCTACATTCCCATTCCTGTGCTCC 121909730 31160 NM_005271.4(GLUD1):c.1519C>T (p.His507Tyr) GLUD1 Feb 12, 2018 MedGen:C1847555,OMIM:606762,Orphanet:ORPHA35878 Hyperinsulinism-hyperammonemia syndrome germline 10 87053380 TAATAGGGTGCATCTGAGAAAGACATCGTGCACTCTGGCTTGGCATACACAATGGAGCGTT 121434405 21218 NM_000969.4(RPL5):c.67C>T (p.Arg23Ter) RPL5 Dec 01, 2008 MedGen:C0265265,OMIM:612561,SNOMED CT:71988008 Aase syndrome germline 1 92833452 TTTAAGAGATACCAAGTGAAATTTAGAAGACGACGAGGTACTGTCACCTTTTTGTGTTTAC 886039666 259949 NM_000051.3(ATM):c.601C>T (p.Gln201Ter) ATM Mar 23, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline 11 108244057 ATTCATGCTGTTACCAAAGGATGCTGTTCTCAGACTGACGGATTAAATTCCAAATTTTTGG 373178770 446317 NM_001396.4(DYRK1A):c.187C>T (p.Gln63Ter) DYRK1A Oct 02, 2017 MedGen:CN517202 not provided germline 21 37472860 GTTTCTGCCTTATCATATTCTGACCAGATTCAGCAACCTCTAACTAACCAGGTAAGTTCAT 794726863 190169 NM_006978.2(RNF113A):c.901C>T (p.Gln301Ter) RNF113A Apr 01, 2015 MedGen:C4225420,OMIM:300953 Trichothiodystrophy 5, nonphotosensitive germline X 119870713 CGCACCACCCCGCGCTGCTATGTCTGTGACCAGCAGACCAATGGCGTCTTCAATCCAGCGA 765429911 481602 NM_000350.2(ABCA4):c.319C>T (p.Arg107Ter) ABCA4 Jan 16, 2018 MedGen:CN517202 not provided germline 1 94108700 CTTTGTCCTTACAGCTTGGCAAGGGTATATCGAGATTTTCAAGAACTCCTCATGAATGCAC 61750168 104456 NM_000180.3(GUCY2D):c.2302C>T (p.Arg768Trp) GUCY2D Aug 10, 2017 MedGen:C2931258,OMIM:204000;MedGen:CN517202 Leber congenital amaurosis 1;not provided germline 17 8013918 CAGAGGGTGCGGAGCCCCCCTCCACTGTGTCGGCCCTTGGTGTCCATGGACCAGGCACCTG 118204020 16646 NM_024884.2(L2HGDH):c.905C>T (p.Pro302Leu) L2HGDH Nov 15, 2004 Human Phenotype Ontology:HP:0040144,MedGen:C1855995,OMIM:236792,Orphanet:ORPHA79314 L-2-hydroxyglutaric aciduria germline 14 50269164 AATGTTATCTTGTAAAAGGAAATATTTATCCGGTAGGTAATGATGCTTCCTACTTCTCATT 869312914 226940 NM_015346.3(ZFYVE26):c.7195C>T (p.Gln2399Ter) ZFYVE26 Jul 15, 2014 MeSH:D030342,MedGen:C0950123 Inborn genetic diseases germline 14 67752520 CCATCATGTTGTGTTCTGTTCTAGGACTTCCAGCTGGATGCTGCCATGACCTACTGCAGAG 1131690925 420697 NM_000455.4(STK11):c.367C>T (p.Gln123Ter) STK11 Nov 30, 2012 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 19 1218493 CTGGTGGATGTGTTATACAACGAAGAGAAGCAGAAAATATATCCTTTCCGGTGTTGGGACC 267606709 15787 NM_001080522.2(CC2D2A):c.3347C>T (p.Thr1116Met) CC2D2A Feb 23, 2015 MedGen:C1857662,OMIM:216360,Orphanet:ORPHA1454;MedGen:C2676788,OMIM:612285 COACH syndrome;Joubert syndrome 9 germline;unknown 4 15567735 CTTTTCAACGAACAGTTTGCCATACGACTACGGCTGAAGGACCAAACCCTAGCTGGAATGA 28938469 24134 NM_001287174.1(ABCC8):c.4261C>T (p.Arg1421Cys) ABCC8 Dec 29, 2000 MedGen:C1257959,OMIM:256450,SNOMED CT:360339005 Persistent hyperinsulinemic hypoglycemia of infancy germline 11 17395659 GCCAAACTGCCGCTGCACACCCTGCGCTCACGCCTCTCCATCATCCTGCAGGACCCCGTCC 749426946 260249 NM_006031.5(PCNT):c.7819C>T (p.Arg2607Ter) PCNT Oct 13, 2015 MedGen:CN517202 not provided germline 21 46430138 AAGCTCCTGGCGGCGGAGCAGACTGTAGTGCGAGATTTGAAGTCCGACCTCTGTGAGAGCA 886039036 258925 NM_000138.4(FBN1):c.439C>T (p.Gln147Ter) FBN1 Jun 11, 2015 MedGen:CN118826,Orphanet:ORPHA91387 Thoracic aortic aneurysm and aortic dissection germline 15 48600142 CAGAAAGGATACATAGGGACTCACTGTGGACAACGTAAGTACACTGTAGTTATAAGTATTC 104894276 15519 NM_000317.2(PTS):c.259C>T (p.Pro87Ser) PTS Jan 01, 1998 MedGen:C0878676,OMIM:261640,Orphanet:ORPHA13 6-pyruvoyl-tetrahydropterin synthase deficiency germline 11 112233178 TGGTTTTGTCTCTAGGAGGCGATTATGCAGCCCCTTGATCATAAGAATCTGGATATGGATG 1057519475 362200 NM_001453.2(FOXC1):c.316C>T (p.Gln106Ter) FOXC1 Sep 19, 2014 MedGen:C2678503,OMIM:602482 Axenfeld-Rieger syndrome type 3 unknown 6 1610761 GACAAGAAGATCACCCTGAACGGCATCTACCAGTTCATCATGGACCGCTTCCCCTTCTACC 63751153 95157 NM_000249.3(MLH1):c.1225C>T (p.Gln409Ter) MLH1 Jul 05, 2017 MedGen:C0009405,Orphanet:ORPHA443090;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Hereditary nonpolyposis colon cancer;Lynch syndrome germline 3 37025823 CCTCTGAGCAAACCCCTGTCCAGTCAGCCCCAGGCCATTGTCACAGAGGATAAGACAGATA -1 417119 NM_019098.4(CNGB3):c.926C>T (p.Pro309Leu) CNGB3 Mar 27, 2017 MedGen:C1849792,OMIM:262300 Achromatopsia 3 germline 8 86647865 TTCAACAGTTGGATGTCGCATCAATAATACCATTTGATATTTGCTACCTCTTCTTTGGGTT 794727420 193121 NM_003482.3(KMT2D):c.5677C>T (p.Gln1893Ter) KMT2D Dec 29, 2014 MedGen:CN030661,OMIM:147920 Kabuki syndrome 1 germline 12 49042846 CTGCCCAAGATGGAATCCAAGGACCTGCAGCAGCTCTTCAAGGATGTTCTGGGCTCTGAAC 139430866 39555 NM_024996.5(GFM1):c.748C>T (p.Arg250Trp) GFM1 Nov 08, 2017 MedGen:C1836797,OMIM:609060,Orphanet:ORPHA137681 Combined oxidative phosphorylation deficiency 1 germline 3 158652154 GCTGAATTAAGGGCGGCGGCCACTGACCACCGGCAGGAGCTAATTGAATGTGTTGCCAATT 80338964 34298 NM_005359.5(SMAD4):c.1162C>T (p.Gln388Ter) SMAD4 Dec 04, 2012 MedGen:C0345893,OMIM:174900,Orphanet:ORPHA329971,SNOMED CT:9273005 Juvenile polyposis syndrome not provided 18 51067041 TTCCTAAGGTTGCACATAGGCAAAGGTGTGCAGTTGGAATGTAAAGGTGAAGGTGATGTTT 200068769 460162 NM_000274.3(OAT):c.1192C>T (p.Arg398Ter) OAT Oct 13, 2016 MedGen:C0018425 Gyrate atrophy germline 10 124398070 TGGGATGCTTGGAAGGTGTGTCTACGACTTCGAGATAATGGACTTCTGGCCAAGCCAACCC 778806374 421219 NM_000029.3(AGT):c.1087C>T (p.Gln363Ter) AGT May 15, 2017 MedGen:CN517202 not provided germline 1 230705970 CTGGACAAGGTGGAGGGTCTCACTTTCCAGCAAAACTCCCTCAACTGGATGAAGAAACTAT 121918450 28603 NM_000212.2(ITGB3):c.2248C>T (p.Arg750Ter) ITGB3 Nov 01, 1997 MedGen:C0040015,OMIM:273800,Orphanet:ORPHA849,SNOMED CT:32942005 Glanzmann thrombasthenia germline 17 47307584 ATCTGGAAACTCCTCATCACCATCCACGACCGAAAAGAATTCGCTAAATTTGAGGAAGAAC 876658932 242453 NM_004360.4(CDH1):c.220C>T (p.Arg74Ter) CDH1 Jul 13, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1708349,OMIM:137215,Orphanet:ORPHA26106 Hereditary cancer-predisposing syndrome;Hereditary diffuse gastric cancer germline 16 68801726 CAAAGGACAGCCTATTTTTCCCTCGACACCCGATTCAAAGTGGGCACAGATGGTGTGATTA 137852467 25360 NM_000132.3(F8):c.6544C>T (p.Arg2182Cys) F8 Apr 01, 1992 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154863113 CCAACTCATTATAGCATTCGCAGCACTCTTCGCATGGAGTTGATGGGCTGTGATTTAAATA 199763682 260080 NM_000126.3(ETFA):c.625C>T (p.Arg209Ter) ETFA Jun 21, 2016 MedGen:CN517202 not provided germline 15 76285676 TGGCTTGACCAGAAATTAACAAAAAGTGATCGACCAGAGCTAACAGGTGCCAAAGTGGTGG 1135401800 424677 NM_004187.3(KDM5C):c.2482C>T (p.Arg828Ter) KDM5C Jan 06, 2017 MedGen:C1845243,OMIM:300534,Orphanet:ORPHA85279 Mental retardation, syndromic, Claes-Jensen type, X-linked maternal X 53198524 TGCCTGAGTGAGGCAGAGGCTTGCGTGTCCCGAGCTCTGGGACTGGTCAGCGGCCAGGAAG 104894880 25729 NM_000266.3(NDP):c.181C>T (p.Leu61Phe) NDP Jan 01, 1997 MedGen:C0266526,OMIM:310600,SNOMED CT:15228007 Atrophia bulborum hereditaria germline X 43950020 AACCACCTCCTTTTCTTTCCCCAGATGGTGCTCCTGGCCAGGTGCGAGGGGCACTGCAGCC 137852800 33417 NM_001039523.2(CHRNA1):c.896C>T (p.Thr299Ile) CHRNA1 May 01, 1997 MedGen:C0751885,OMIM:601462 Myasthenic syndrome, slow-channel congenital germline 2 174750127 CTCTGAGCATCTCTGTCTTACTGTCTTTGACTGTGTTCCTTCTGGTCATCGTGGAGCTGAT 45517396 58513 NM_000548.4(TSC2):c.5140C>T (p.Gln1714Ter) TSC2 Sep 01, 2016 MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000;MedGen:CN169374 Tuberous sclerosis syndrome;not specified germline 16 2088119 TCTGACCGCAACCTGCCCTTCGTGGCCCGCCAGATGGCCCTGCACGCAAATGTGAGTGGGG 878853125 237499 NM_001258221.1(KCTD1):c.58C>T (p.Pro20Ser) KCTD1 Jan 29, 2014 MedGen:C1867020,OMIM:181270,Orphanet:ORPHA2036 Scalp ear nipple syndrome unknown 18 26501178 CCTGCATCTCCACTGAACAACCAAGGCATCCCTACTCCAGCACAACTCACAAAATCCAATG 104893680 17081 NM_032146.5(ARL6):c.92C>T (p.Thr31Met) ARL6 Sep 01, 2004 MedGen:C1859564,OMIM:600151 Bardet-Biedl syndrome 3 germline 3 97768199 TGTGCCTTGGGCTAGATAATAGTGGCAAAACGACGATCATTAACAAACTTAAACCTTCAAA 28941773 18875 NM_000017.3(ACADS):c.1058C>T (p.Ser353Leu) ACADS Jan 12, 2017 MedGen:C0342783,OMIM:201470,Orphanet:ORPHA26792,SNOMED CT:124166007;MedGen:CN517202 Deficiency of butyryl-CoA dehydrogenase;not provided germline;unknown 12 120739168 AGGAGGCAGCCATGGCCAAGCTGGCCGCCTCGGAGGCCGCGACCGCCATCAGCCACCAGGT 121909684 31235 NM_000821.6(GGCX):c.899C>T (p.Ser300Phe) GGCX Mar 01, 2009 MedGen:C1835813,OMIM:610842,Orphanet:ORPHA91135 Pseudoxanthoma elasticum-like disorder with multiple coagulation factor deficiency germline 2 85553488 ATTTTCTCCCTGCTTTCCTAGGTATGTTCTCCTACGTCATGCTGGCCAGCAGCCCTCTCTT 137852605 24569 NM_194442.2(LBR):c.356C>T (p.Pro119Leu) LBR Nov 01, 2003 MedGen:C0030779,OMIM:169400,SNOMED CT:85559002 Pelger-Huët anomaly germline 1 225422087 CAAGGAGGGAAGTGGAAGTTAAATTGACTCCGCTGATTCTGGTACTTGTGTTTATCCTTAT 121908225 23543 NM_001127221.1(CACNA1A):c.653C>T (p.Ser218Leu) CACNA1A May 12, 2016 MedGen:C1720416,OMIM:108500,Orphanet:ORPHA97,SNOMED CT:420932006;MedGen:C1832894,OMIM:141500 Episodic ataxia type 2;Familial hemiplegic migraine type 1 germline 19 13365448 TCCCCCCAGGTTTACAAGTCGTCCTGAAGTCGATCATGAAGGCGATGATCCCTTTGCTGCA 128626235 26264 NM_004006.2(DMD):c.433C>T (p.Arg145Ter) DMD Feb 16, 2017 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009;MedGen:C3668940,OMIM:302045;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001;MedGen:CN517202 Becker muscular dystrophy;Dilated cardiomyopathy 3B;Duchenne muscular dystrophy;not provided germline X 32816565 AACAGTGAAAAGATTCTCCTGAGCTGGGTCCGACAATCAACTCGTAATTATCCACAGGTTA 753776168 445165 NM_007129.4(ZIC2):c.637C>T (p.Gln213Ter) ZIC2 Jun 21, 2017 MedGen:CN517202 not provided germline 13 99982701 GACCCCTACTCGGCGGCGCAACTCCACAACCAGTACGGCCCCATGAATATGAACATGGGTA 63751457 30726 NM_000517.4(HBA2):c.69C>T (p.Gly23=) HBA2 Aug 01, 2004 MedGen:C1456873 Alpha plus thalassemia germline 16 172981 CGCCTGGGGTAAGGTCGGCGCGCACGCTGGCGAGTATGGTGCGGAGGCCCTGGAGAGGTGA 376882637 424574 NM_004237.3(TRIP13):c.1060C>T (p.Arg354Ter) TRIP13 Jul 27, 2017 MedGen:CN351188,OMIM:617598 Mosaic variegated aneuploidy syndrome 3 germline 5 914504 ATATACCCTCGCCAGCAGCTGCTGACCCTCCGAGAGCTAGAGATGATTGGCTTCATTGAAA 886039430 259708 NM_001165963.1(SCN1A):c.1702C>T (p.Arg568Ter) SCN1A Oct 21, 2016 MedGen:CN517202 not provided germline 2 166044010 AGCATCCGTGGCTCCCTATTTTCACCAAGGCGAAATAGCAGAACAAGCCTTTTCAGCTTTA 387907337 51097 NM_001885.2(CRYAB):c.58C>T (p.Pro20Ser) CRYAB Apr 18, 2013 MedGen:C3151065,OMIM:613763 Cataract 16, multiple types germline 11 111911667 ATCCGCCGCCCCTTCTTTCCTTTCCACTCCCCCAGCCGCCTCTTTGACCAGTTCTTCGGAG 119473031 19307 NM_024101.6(MLPH):c.103C>T (p.Arg35Trp) MLPH Aug 01, 2003 MedGen:C1836573,OMIM:609227,Orphanet:ORPHA79478 Griscelli syndrome type 3 germline 2 237493529 GATTTTGACCTCCGAAGGAAAGAAGAGGAACGGCTAGAGTGAGTGTGCCGTGCTGAGCCCA 121912884 32422 NM_001844.4(COL2A1):c.1693C>T (p.Arg565Cys) COL2A1 Jul 19, 2016 MedGen:C2020284,OMIM:108300;MedGen:CN517202 Stickler syndrome type 1;not provided germline 12 47985575 TCTCTCTCCTGAACAAAGGGTCTCACTGGCCGCCCTGGTGATGCTGGTCCTCAAGGCAAAG 202229910 214349 NM_198525.2(KIF7):c.2917C>T (p.Arg973Ter) KIF7 Feb 23, 2015 Gene:46,MedGen:C0796147,OMIM:200990,Orphanet:ORPHA36 Acrocallosal syndrome, Schinzel type unknown 15 89631689 TGCCCCCAGGCCCTCAACGAGGACATCGTGCGAGTGTCCAGCCGGCTGGAGCACCTGGAGA -1 471431 NM_003159.2(CDKL5):c.1519C>T (p.Gln507Ter) CDKL5 Feb 23, 2017 MedGen:CN128785;MedGen:C1839333,OMIM:300672 Angelman syndrome-like;Early infantile epileptic encephalopathy 2 germline X 18604443 TCTGTGAGCAACCTTTCTGAAGCCAGGGCCCAAATTGCGGAGCCCAGTACCAGTAGGTACT 180177157 186651 NM_000030.2(AGXT):c.106C>T (p.Arg36Cys) AGXT Nov 27, 2014 MedGen:C0268164,OMIM:259900,Orphanet:ORPHA93598,SNOMED CT:65520001 Primary hyperoxaluria, type I germline;unknown 2 240868971 CTGGGGCCTGGTCCTTCCAACCTGCCTCCTCGCATCATGGCAGCCGGGGGGCTGCAGATGA 120074180 18158 NM_000218.2(KCNQ1):c.817C>T (p.Leu273Phe) KCNQ1 Oct 13, 2017 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MedGen:C0035828,OMIM:192500,Orphanet:ORPHA101016,SNOMED CT:20852007;MedGen:CN517202 Congenital long QT syndrome;Long QT syndrome 1;not provided germline 11 2572882 ATAACCACCCTGTACATCGGCTTCCTGGGCCTCATCTTCTCCTCGTACTTTGTGTACCTGG 104894592 16601 NM_000263.3(NAGLU):c.889C>T (p.Arg297Ter) NAGLU May 31, 2017 MedGen:C0086648,OMIM:252920,Orphanet:ORPHA79270,SNOMED CT:59990008;MedGen:C0026706,SNOMED CT:88393000;MedGen:CN517202 Mucopolysaccharidosis, MPS-III-B;Sanfilippo syndrome;not provided germline 17 42541074 ATATTCCCCATCATCGGGAGCCTCTTCCTGCGAGAGCTGATCAAAGAGTTTGGCACAGACC 118192177 28016 NM_000540.2(RYR1):c.6617C>T (p.Thr2206Met) RYR1 May 04, 2017 MedGen:CN228299;MedGen:CN031421,OMIM:145600;Human Phenotype Ontology:HP:0000508,MedGen:C0005745;MedGen:C0344490;MedGen:CN517202 History of neonatal hypotonia;Malignant hyperthermia, susceptibility to, 1;Ptosis;Sacral agenesis;not provided germline;unknown 19 38496283 ACCTGATGAGGGCGCTGGGCATGCACGAGACGGTCATGGAGGTCATGGTCAACGTCCTCGG 587784188 168262 NM_022455.4(NSD1):c.6310C>T (p.Gln2104Ter) NSD1 Feb 08, 2013 MedGen:CN035106,OMIM:117550 Sotos syndrome 1 germline 5 177292005 GAAAAGTCAAAGAAATTCAAGAAGAAGCAACAGGGAAAGCGCAGGACCCAGGGTGAAATCA 587777207 107271 NM_001013703.3(EIF2AK4):c.3766C>T (p.Arg1256Ter) EIF2AK4 Feb 01, 2014 MedGen:C0340848,OMIM:234810,SNOMED CT:234161007 Familial pulmonary capillary hemangiomatosis germline 15 40016508 TGACTGTGCCCCTTTGCTTTCCAGCTGTGTCGACTCTACAAGTTTATTGAACAGAAGGGAG 80359140 67362 NM_000059.3(BRCA2):c.8878C>T (p.Gln2960Ter) BRCA2 Jul 10, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline;unknown 13 32379440 AAGGCCATGGAATCTGCTGAACAAAAGGAACAAGGTTTATCAAGGGATGTCACAACCGTGT 886039552 260265 NM_003560.3(PLA2G6):c.208C>T (p.Arg70Ter) PLA2G6 May 08, 2017 MedGen:CN517202 not provided germline 22 38169219 GTCAACCCCAGGAACTCACAGAGTGGATTCCGGTGGGTGATGCTCAGCGGGAACATACTTC 142967670 187035 NM_000159.3(GCDH):c.262C>T (p.Arg88Cys) GCDH Aug 21, 2017 MedGen:C0268595,OMIM:231670,Orphanet:ORPHA25,SNOMED CT:360416003,SNOMED CT:76175005;MedGen:CN517202 Glutaric aciduria, type 1;not provided germline;unknown 19 12891965 AGACTCATGCCTCGCATCCTGTTGGCCAATCGCAACGAAGGTGGGCGGGCTGGTGGGTGCC 121908424 20378 NM_153717.2(EVC):c.2635C>T (p.Gln879Ter) EVC Mar 01, 2000 MedGen:C0013903,OMIM:225500,Orphanet:ORPHA289,SNOMED CT:62501005 Chondroectodermal dysplasia germline 4 5808274 CACCAGCAGATGCGTCTGCACGCCCAGCAGCAGCAGGCAGGAGTCATGGACCTTCTGGAAG 886043221 270055 NM_000023.3(SGCA):c.403C>T (p.Gln135Ter) SGCA Jan 25, 2016 MedGen:C2936332,OMIM:608099,Orphanet:ORPHA62 Limb-girdle muscular dystrophy, type 2D germline 17 50168391 CTGGCCTTCCCAGGCCCCCTGCTGCCATACCAAGCCGAGTTCCTGGTGCGCAGCCACGATG -1 445359 NM_000138.4(FBN1):c.3253C>T (p.Gln1085Ter) FBN1 Oct 10, 2017 MedGen:CN517202 not provided germline 15 48488197 CGCATATCTCCTGACCTCTGTGGCAGAGGCCAGTGTGTGAACACCCCTGGGGACTTTGAAT 372989281 152845 NM_004183.3(BEST1):c.763C>T (p.Arg255Trp) BEST1 - Human Phenotype Ontology:HP:0000547,MeSH:D012174,MedGen:C0035334,OMIM:268000,Orphanet:ORPHA791,SNOMED CT:28835009 Retinitis pigmentosa not provided 11 61958194 TACAGCTTCTTCCTGACTTGTCTAGTTGGGCGGCAGTTTCTGAACCCAGCCAAGGCCTACC 587781994 151480 NM_000051.3(ATM):c.7951C>T (p.Gln2651Ter) ATM Oct 19, 2016 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0027672,SNOMED CT:699346009 Ataxia-telangiectasia syndrome;Hereditary cancer-predisposing syndrome germline;unknown 11 108333909 AATACAGAAGGCATAAATATTCCAGCAGACCAGCCAATTACTAAACTTAAGAATTTAGAAG 672601340 167415 NM_006624.5(ZMYND11):c.976C>T (p.Gln326Ter) ZMYND11 Oct 01, 2014 MedGen:C4015167,OMIM:616083 Mental retardation, autosomal dominant 30 germline 10 246791 CCTAGGGCCTGGATTCCTTCTGAAAACATTCAAGATATCACAGTCAACATTCATCGGCTGC 121908327 19787 NM_007267.7(TMC6):c.280C>T (p.Arg94Ter) TMC6 Dec 01, 2002 MedGen:C0014522,OMIM:226400,Orphanet:ORPHA302,SNOMED CT:19138001 EPIDERMODYSPLASIA VERRUCIFORMIS germline 17 78125876 CCCTGCCCAGCTGCCTCCATAGGCCGCAGCCGAGGTGCCATCATCTCCCAGTACTACAACC 137854535 30980 NM_000516.5(GNAS):c.772C>T (p.Arg258Trp) GNAS Jan 06, 2017 MedGen:C0033835,OMIM:612463,Orphanet:ORPHA79445,SNOMED CT:237659007 Pseudopseudohypoparathyroidism de novo;germline 20 58909737 GTGGCCAGCAGCAGCTACAACATGGTCATCCGGGAGGACAACCAGACCAACCGCCTGCAGG -1 481731 NM_022455.4(NSD1):c.3457C>T (p.Gln1153Ter) NSD1 Dec 13, 2017 MedGen:CN517202 not provided germline 5 177211856 AGTGAGAATGATGAACTCAATGGTGTAAATCAAGTGGTGCCTAAAAAGCGGTGGCAGCGTT 387907230 44207 NM_005691.3(ABCC9):c.178C>T (p.His60Tyr) ABCC9 May 18, 2012 MedGen:C0795905,OMIM:239850,Orphanet:ORPHA1517 Hypertrichotic osteochondrodysplasia germline 12 21933888 GGGAGCCAAAGCTCAAAAGTACAAATTCACCACAACACATGGCTTCATTTTCCGGGACATA 779077039 362515 NM_016239.3(MYO15A):c.4528C>T (p.Gln1510Ter) MYO15A Mar 01, 2016 MedGen:C1838263,OMIM:600316 Deafness, autosomal recessive 3 inherited 17 18135756 GTGGCCTCAGTGGTGAGTGCCCGAGAGATCCAGGCCGTGGCAGAGCTGCTGCAGATCTCCC 150239404 407798 NM_018294.5(CWF19L1):c.622C>T (p.Arg208Ter) CWF19L1 Aug 25, 2015 MedGen:CN517202 not provided germline 10 100253422 GAAAAGACCTATTATGAGAGGCTTCCATATCGGTGAGTAGCATTTCATTCTTCTTGGCTTT 770053354 260136 NM_000512.4(GALNS):c.860C>T (p.Ser287Leu) GALNS Mar 16, 2015 MedGen:CN517202 not provided germline 16 88835251 TCGCGGACAACACCTTCGTCTTCTTCACGTCGGACAACGGCGCTGCCCTCATTTCCGCCCC 121909680 31241 NM_000821.6(GGCX):c.1120C>T (p.Gln374Ter) GGCX Mar 01, 2007 MedGen:C1835813,OMIM:610842,Orphanet:ORPHA91135 Pseudoxanthoma elasticum-like disorder with multiple coagulation factor deficiency germline 2 85553267 GCTGCCTTCACCCTGCTCTACCTCCTGGAGCAGCTATTCCTGCCCTATTCTCATTTTCTCA 137853040 21916 NM_003816.2(ADAM9):c.766C>T (p.Arg256Ter) ADAM9 May 01, 2009 MedGen:C1423873,OMIM:612775 Cone-rod dystrophy 9 germline 8 39023177 TCTTCCCAGATGTATATTATGTTAAATATTCGAATTGTGCTAGTTGGACTGGAGATTTGGA 886044136 273490 NM_000214.2(JAG1):c.2122C>T (p.Gln708Ter) JAG1 Jul 05, 2016 MedGen:C1956125,OMIM:118450 Alagille syndrome 1 germline 20 10645248 ACACTGAAATATTTTCCTCCAGGTGACAGTCAGTGTGATGAGGCCACGTGCAACAACGGTG 72556296 103142 NM_000531.5(OTC):c.571C>T (p.Leu191Phe) OTC - MedGen:CN517202 not provided unknown X 38403648 GAACACTATAGCTCTCTGAAAGGTCTTACCCTCAGCTGGATCGGGGATGGGAACAATATCC 121964977 27026 NM_000170.2(GLDC):c.2405C>T (p.Ala802Val) GLDC Jun 18, 2017 Human Phenotype Ontology:HP:0008288,MedGen:C0751748,OMIM:605899,Orphanet:ORPHA407,SNOMED CT:237939006 Non-ketotic hyperglycinemia germline;inherited 9 6553420 AGGATGCCTGTCCTGTGGGAACCGTCAGTGCGGCCCCATGGGGCTCCAGTTCCATCTTGCC 199422153 34423 NM_018136.4(ASPM):c.3055C>T (p.Arg1019Ter) ASPM Sep 01, 2009 MedGen:C1837501,OMIM:608716 Primary autosomal recessive microcephaly 5 not provided 1 197125073 GTTGACATTGTTCTTCAAGTTCTTAAATCACGAGGAATTGAATTAAGTGATGAGCATGGTA 45517159 59338 NM_000548.4(TSC2):c.1255C>T (p.Pro419Ser) TSC2 Dec 17, 2012 MedGen:C1860707,OMIM:613254;MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000 Tuberous sclerosis 2;Tuberous sclerosis syndrome germline 16 2062006 GAACTGGTGGAGAGATGTGCGGACCAGAGGCCTGTGAGACCCCCTCCTGGGTGGGGCCTTT 387906599 38577 NM_001822.5(CHN1):c.422C>T (p.Pro141Leu) CHN1 May 01, 2011 MedGen:C0751083,OMIM:604356 Duane syndrome type 2 germline 2 174877967 CAGAATACATTGCCAAGATGACGATAAACCCAATTTATGAGCACGTAGGATACACAACCTT 137852634 24303 NM_001038.5(SCNN1A):c.1522C>T (p.Arg508Ter) SCNN1A Oct 01, 1999 MedGen:C1449843,OMIM:264350,Orphanet:ORPHA171876 Pseudohypoaldosteronism type 1 autosomal recessive germline 12 6348981 TCCTAGGAATGGGTCTTCCAGATGCTATCGCGACAGAACAATTACACCGTCAACAACAAGA 397514761 75610 NM_002295.5(RPSA):c.556C>T (p.Arg186Cys) RPSA May 24, 2013 MedGen:C1849084,OMIM:271400 Asplenia, isolated congenital germline 3 39411706 TGGATGCTGGCTCGGGAAGTTCTGCGCATGCGTGGCACCATTTCCCGTGAACACCCATGGG 137854467 31479 NM_000138.4(FBN1):c.364C>T (p.Arg122Cys) FBN1 Aug 03, 2017 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:C4016055;MedGen:CN517202 Marfan syndrome;Marfan syndrome, atypical;not provided germline 15 48600217 CTTTTTTTTCAAGTACAACACTGCAATATTCGCTGTATGAATGGAGGTAGCTGCAGTGACG 74315467 18109 NM_000487.5(ARSA):c.641C>T (p.Ala214Val) ARSA Aug 18, 2016 MedGen:C0023522,OMIM:250100,Orphanet:ORPHA512,SNOMED CT:396338004 Metachromatic leukodystrophy germline;unknown 22 50626877 TGGCTTTCGCCCATGACCTCATGGCCGACGCCCAGCGCCAGGATCGCCCCTTCTTCCTGTA 71530923 187111 NM_006005.3(WFS1):c.124C>T (p.Arg42Ter) WFS1 Apr 10, 2017 MedGen:C0043207,OMIM:222300,Orphanet:ORPHA3463,SNOMED CT:70694009;MedGen:C0043207,OMIM:222300,Orphanet:ORPHA3463,SNOMED CT:70694009;MedGen:C1833021,OMIM:600965;MedGen:C1857286,OMIM:614296,Orphanet:ORPHA411590;MedGen:CN517202 Diabetes mellitus AND insipidus with optic atrophy AND deafness;Diabetes mellitus AND insipidus with optic atrophy AND deafness;WFS1-Related Disorders;Wolfram-like syndrome, autosomal dominant;not provided germline;maternal 4 6277579 TCGTTGGAGCAGGAGAGGAGCGAAAGGCCCCGAGCACCCGGACCCCAGGCTGGCCCTGGCC 772994617 452272 NM_018297.3(NGLY1):c.871C>T (p.Arg291Ter) NGLY1 Aug 11, 2017 MedGen:C3808991,OMIM:615273,Orphanet:ORPHA404454 Congenital disorder of deglycosylation germline 3 25739587 CATTACTGTGATGCCTGCCAGTTCAGCAATCGATTCCCAAGGTGGGTGCCCTGGATGGTAA 587778617 96774 NM_000535.6(PMS2):c.1261C>T (p.Arg421Ter) PMS2 Nov 30, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:CN517202;MedGen:CN169374 Hereditary cancer-predisposing syndrome;Lynch syndrome;not provided;not specified germline 7 5987504 GAAAAAAAAGACGTGTCCATTTCCAGACTGCGAGAGGCCTTTTCTCTTCGTCACACAACAG 118203910 15693 NM_000130.4(F5):c.6304C>T (p.Arg2102Cys) F5 Jan 01, 2003 MedGen:C0015499,OMIM:227400,Orphanet:ORPHA326,SNOMED CT:4320005 Factor V deficiency germline 1 169518453 TGGGGAGATTACTGGGAACCCTTCCGTGCCCGTCTGAATGCCCAGGGACGTGTGAATGCCT -1 263840 NM_020975.4(RET):c.1196C>T (p.Pro399Leu) RET Nov 18, 2016 MedGen:C2931876,OMIM:142623 Hirschsprung disease 1 maternal 10 43109163 TCTTGCTCCACTTCAACGTGTCGGTGCTGCCGGTCAGCCTGCACCTGCCCAGTACCTACTC 727503911 177216 NM_003494.3(DYSF):c.3832C>T (p.Gln1278Ter) DYSF Mar 11, 2014 MedGen:C1850889,OMIM:253601,Orphanet:ORPHA268;MedGen:C1850808,OMIM:254130,Orphanet:ORPHA45448 Limb-girdle muscular dystrophy, type 2B;Miyoshi muscular dystrophy 1 germline 2 71600831 GGGGAGCTGCTGGCCTCTTTTGAGCTCATCCAGAGAGAGAAGGTGAGGCTGGTCTATATCC 587784236 169385 NM_000430.3(PAFAH1B1):c.1009C>T (p.His337Tyr) PAFAH1B1 Feb 08, 2013 MedGen:C1843916,OMIM:607432 Lissencephaly 1 germline 17 2680170 TCAAATAACTTTTTTGTTTTTAAGGTGGGTCATGATAACTGGGTACGTGGAGTTCTGTTCC -1 481491 NM_001001563.3(TIMM50):c.1024C>T (p.Arg342Trp) TIMM50 Nov 02, 2017 MedGen:CN510468,OMIM:617698 3-METHYLGLUTACONIC ACIDURIA, TYPE IX maternal 19 39488079 ACTCACTTCCAGGATATTTCATGTCTGAATCGGGACCCAGCTCGAGTAGTAGTTGTGGACT 397514661 48740 NM_002354.2(EPCAM):c.412C>T (p.Arg138Ter) EPCAM Jul 01, 2013 MedGen:C2750737,OMIM:613217,Orphanet:ORPHA92050 Diarrhea 5, with tufting enteropathy, congenital germline 2 47374035 GACAAGGACACTGAAATAACCTGCTCTGAGCGAGTGAGAACCTAGTGAGTGGGGCTGCCTA 137852305 25514 NM_000032.4(ALAS2):c.1231C>T (p.Arg411Cys) ALAS2 Dec 01, 1998 MedGen:C0221018,OMIM:300751,Orphanet:ORPHA98362,SNOMED CT:62677000 Hereditary sideroblastic anemia germline X 55014953 GCCAGCACCCGTGACTTGGTGGACATGGTGCGCTCCTATGCTGCAGGCTTCATCTTTACCA 878855300 239642 NM_198253.2(TERT):c.2098C>T (p.Gln700Ter) TERT Dec 17, 2015 MedGen:C3151443,OMIM:613989 Dyskeratosis congenita, autosomal dominant, 2 germline 5 1279323 TGGCGCACCTTCGTGCTGCGTGTGCGGGCCCAGGACCCGCCGCCTGAGCTGTACTTTGTCA 199422231 25536 NM_000202.7(IDS):c.1402C>T (p.Arg468Trp) IDS Jun 26, 2017 MedGen:C0026705,OMIM:309900,SNOMED CT:70737009;MedGen:C0342842 Mucopolysaccharidosis, MPS-II;Mucopolysaccharidosis, type II, mild form germline;unknown X 149482997 CGTGAACTGATTGCCTATAGCCAGTATCCCCGGCCTTCAGACATCCCTCAGTGGAATTCTG 774649299 424646 NM_015340.3(LARS2):c.1987C>T (p.Arg663Trp) LARS2 Jan 06, 2017 MedGen:C3809105,OMIM:615300 Perrault syndrome 4 maternal 3 45516219 GTTGTGGAGCAGTATGGGATCGACACGATTCGGCTCTACATCCTTTTTGCTGCCCCTCCTG -1 442593 NM_000302.3(PLOD1):c.583C>T (p.Gln195Ter) PLOD1 Jul 06, 2017 MedGen:CN517202 not provided germline 1 11954833 TGCAGTCTGGTACCTTCTTTCCTGCAGGAGCAGATCAATATCACCCTGGACCACCGCTGCC 104894136 16821 NM_000102.3(CYP17A1):c.715C>T (p.Arg239Ter) CYP17A1 Jun 05, 2017 MedGen:CN068448;MedGen:C3277851;MedGen:CN517202 Breast cancer, susceptibility to;Combined partial 17-alpha-hydroxylase/17,20-lyase deficiency;not provided germline 10 102834074 CTGGAAAAATTAAAGAGCCATGTTAAAATACGAAATGATCTGCTGAATAAAATACTTGAAA 760574657 230005 NM_005422.2(TECTA):c.5977C>T (p.Arg1993Ter) TECTA Jan 03, 2016 MedGen:CN043648,Orphanet:ORPHA87884 Nonsyndromic hearing loss and deafness germline 11 121168903 ACACCCACCCGAGATAGCAATGATAAGCTCCGATATTTCATCATTGAAGGAGGGTGAGTAG 121912989 31898 NM_014208.3(DSPP):c.44C>T (p.Ala15Val) DSPP Jun 01, 2012 MedGen:C0205730,OMIM:125490,SNOMED CT:234969005 Dentinogenesis imperfecta - Shield's type II germline 4 87610952 CATATTTTTGCATTTGGGCAGTAGCATGGGCCATTCCAGTAAGTATGCCTTTCTTAGAAAA -1 426212 NM_000267.3(NF1):c.1039C>T (p.Gln347Ter) NF1 Jun 27, 2017 MedGen:CN517202 not provided germline 17 31200572 GAAGATAACTCTGTCATTTTCCTACTTGTTCAGTCCATGGTGGTTGATCTTAAGGTAACAT 756250205 236593 NM_007194.3(CHEK2):c.1486C>T (p.Gln496Ter) CHEK2 Aug 04, 2017 MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Familial cancer of breast;Hereditary cancer-predisposing syndrome;not provided germline 22 28689191 TCACAGGATGAAGACATGAAGAGAAAGTTTCAAGATCTTCTGTCTGAGGAAAATGAATCCA 863225296 214544 NM_001256182.1(ANKRD11):c.7180C>T (p.Gln2394Ter) ANKRD11 Sep 17, 2014 MedGen:C0220687,OMIM:148050,Orphanet:ORPHA2332 KBG syndrome de novo 16 89279362 CCGCGCAAACGCCGCTTTCAGCGCTCCACCCAGCAGCTGCAGCAGCAGCTGAACACGTCCA 797045599 208289 NM_020988.2(GNAO1):c.680C>T (p.Ala227Val) GNAO1 Jun 02, 2016 MedGen:C3809606,OMIM:615473;MedGen:CN517202 Early infantile epileptic encephalopathy 17;not provided germline 16 56336817 AGGACGTCACGGCCATCATTTTCTGTGTCGCGCTCAGCGGCTATGACCAGGTGCTCCACGA -1 444665 NM_004329.2(BMPR1A):c.64C>T (p.Gln22Ter) BMPR1A Sep 19, 2017 MedGen:CN517202 not provided germline 10 86876082 GGAGCCTATTTGTTCATCATTTCTCGTGTTCAAGGTAAATCAGTGTTCATTTTAGTAATGT 1131691178 421051 NM_004329.2(BMPR1A):c.454C>T (p.Arg152Ter) BMPR1A Mar 08, 2012 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 10 86900050 TTGTCAGGTCCGTTTTTTGATGGCAGCATTCGATGGCTGGTTTTGCTCATTTCTATGGCTG 587777630 153737 NM_007315.3(STAT1):c.1154C>T (p.Thr385Met) STAT1 Sep 01, 2013 MedGen:C3279990,OMIM:614162,Orphanet:ORPHA391487 Immunodeficiency 31C germline 2 190986921 ATAGATTTAGGAAGTTCAACATTTTGGGCACGCACACAAAAGTGATGAACATGGAGGAGTC 199469705 39767 NM_138501.5(TECR):c.545C>T (p.Pro182Leu) TECR Dec 20, 2013 MedGen:C3151462,OMIM:614020 Mental retardation, autosomal recessive 14 germline 19 14564841 CCGCGTGGATGGCCTATTACATCAATCACCCTCTCTACACTCCCCCTAGTAAGTGGCCTCA 797044590 188163 NM_002055.4(GFAP):c.1154C>T (p.Ser385Phe) GFAP Jan 08, 2015 MedGen:C0270726,OMIM:203450,Orphanet:ORPHA58,SNOMED CT:81854007 Alexander's disease germline 17 44910632 TCAGGATCACCATTCCCGTGCAGACCTTCTCCAACCTGCAGATTCGAGGTCAGTACAGCAG 111033542 27055 NM_000532.4(PCCB):c.1283C>T (p.Thr428Ile) PCCB Jul 08, 2016 Human Phenotype Ontology:HP:0003353,MedGen:C0268579,OMIM:606054,Orphanet:ORPHA35 Propionic acidemia germline 3 136327239 CATTTGCTGAGGCAACTGTACCCAAAGTCACAGTCATCACCAGGAAGGTGAGGACCTCATG 786204126 185966 NM_014946.3(SPAST):c.1291C>T (p.Arg431Ter) SPAST Aug 16, 2017 MedGen:C1866855,OMIM:182601,Orphanet:ORPHA100985;MedGen:CN517202 Spastic paraplegia 4, autosomal dominant;not provided germline 2 32136608 AAATTGGTGAGGGCTCTTTTTGCTGTGGCTCGAGAACTTCAACCTTCTATAATTTTTATAG 121908502 20736 NM_012448.3(STAT5B):c.454C>T (p.Arg152Ter) STAT5B Nov 01, 2006 MedGen:C1855548,OMIM:245590,Orphanet:ORPHA220465 Growth hormone insensitivity with immunodeficiency germline 17 42223478 CTCCAGATCAACCAGACGTTTGAGGAGCTGCGACTGGTCACGCAGGACACAGAGAATGAGT 104894392 27092 NM_000504.3(F10):c.1096C>T (p.Arg366Cys) F10 Oct 01, 1989 MedGen:C0015519,OMIM:227600,Orphanet:ORPHA328,SNOMED CT:76642003 Factor X deficiency germline 13 113149146 CAGAAGACGGGGATTGTGAGCGGCTTCGGGCGCACCCACGAGAAGGGCCGGCAGTCCACCA 121909625 31435 NM_005141.4(FGB):c.139C>T (p.Arg47Ter) FGB Apr 15, 2004 MedGen:C2584774,OMIM:202400,Orphanet:ORPHA98880 Afibrinogenemia, congenital germline 4 154565832 TTGTAGGGTTTCTTCAGTGCCCGTGGTCATCGACCCCTTGACAAGAAGAGAGAAGAGGCTC 137852974 19584 NM_032667.6(BSCL2):c.823C>T (p.Arg275Ter) BSCL2 Apr 04, 2017 MedGen:C1720863,OMIM:269700 Congenital generalized lipodystrophy type 2 germline 11 62691132 TCAGTAGTTTTTCCTCCACAGGTTAACATCCGAAAAAGAGACAATTCCCGGAAGGAAGTCC 80358573 66106 NM_000059.3(BRCA2):c.3265C>T (p.Gln1089Ter) BRCA2 Sep 08, 2016 MedGen:C2675520,OMIM:612555;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 2;Hereditary cancer-predisposing syndrome germline 13 32337620 TCTGATTGTAAAAATAGTCATATAACCCCTCAGATGTTATTTTCCAAGCAGGATTTTAATT 1057520600 364395 NM_020699.3(GATAD2B):c.658C>T (p.Gln220Ter) GATAD2B Apr 24, 2015 MedGen:CN517202 not provided germline 1 153818111 GTTCAGCCATCTCCTGCCCATGTGGGACAGCAGGGCCTATCTAAGCTTCCCTCTCGGCCTG 749466673 239695 NM_005732.3(RAD50):c.1966C>T (p.Arg656Ter) RAD50 Mar 17, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 5 132595041 AAAGAGGAAATTGAAAAATCATCAAAACAGCGAGGTAAGTTGTCTACTTTATATTATCAGG 750650768 478077 NM_024675.3(PALB2):c.2512C>T (p.Gln838Ter) PALB2 Jun 09, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 16 23629642 TGCCAGGAGCTGCATAAACATTCCGTCGAACAGGTACAATCCATTTCCTCTGTGAAATTTT 587777875 165484 NM_001127660.1(MFN2):c.775C>T (p.Arg259Cys) MFN2 Apr 11, 2017 MedGen:C1836485,OMIM:609260,Orphanet:ORPHA99947;MedGen:CN517202 Charcot-Marie-Tooth disease, type 2A2A;not provided germline 1 11999054 TCCCGGCCAAACATCTTCATCCTGAACAACCGCTGGGATGCATCTGCCTCAGAGCCCGAGT 63751229 33172 NM_000021.3(PSEN1):c.799C>T (p.Pro267Ser) PSEN1 Nov 02, 2016 MedGen:C1843013,OMIM:607822;MedGen:CN517202 Alzheimer disease, type 3;not provided germline 14 73198060 GATTTAGTGGCTGTTTTGTGTCCGAAAGGTCCACTTCGTATGCTGGTTGAAACAGCTCAGG 1085307608 415335 NM_001844.4(COL2A1):c.1597C>T (p.Arg533Ter) COL2A1 Apr 18, 2017 MedGen:CN517202 not provided germline 12 47985811 TGTGTACCCTTGTAGGGAGCCCCTGGAGAGCGAGGGCCCAGTGGTCTTGCTGGCCCCAAGG 104893894 29882 NM_002185.4(IL7R):c.394C>T (p.Pro132Ser) IL7R Oct 15, 2000 MedGen:C1837028,OMIM:608971 Severe combined immunodeficiency, autosomal recessive, T cell-negative, B cell-positive, NK cell-positive germline 5 35871070 TCTTTTTCTTTTCCAGTTAAACCTGAGGCTCCTTTTGACCTGAGTGTCGTCTATCGGGAAG 121912854 32501 NM_000094.3(COL7A1):c.706C>T (p.Arg236Ter) COL7A1 May 07, 2015 Human Phenotype Ontology:HP:0008066,MedGen:C0241054;Human Phenotype Ontology:HP:0000682,MedGen:C4021800;Human Phenotype Ontology:HP:0000164,MedGen:C0262444;Human Phenotype Ontology:HP:0002293,MedGen:C1860137;Human Phenotype Ontology:HP:0004325,MedGen:CN003826;Human Phenotype Ontology:HP:0002460,MedGen:C1864696;Human Phenotype Ontology:HP:0003457,MedGen:C0476403;MedGen:C2673612;Human Phenotype Ontology:HP:0001508,MedGen:C0231246;Human Phenotype Ontology:HP:0000953,MedGen:C0162834,Orphanet:ORPHA79375;Human Phenotype Ontology:HP:0000252,MedGen:C0424688;Human Phenotype Ontology:HP:0008404,MedGen:C0221260;MedGen:C0079474,OMIM:226600,SNOMED CT:48528004;Human Phenotype Ontology:HP:0100699,MedGen:C0008767;Human Phenotype Ontology:HP:0004552,MedGen:C3806301;Human Phenotype Ontology:HP:0004322,MedGen:C0349588 Abnormal blistering of the skin;Abnormality of dental enamel;Abnormality of the teeth;Alopecia of scalp;Decreased body weight;Distal muscle weakness;EMG abnormality;Epidermolysis bullosa dystrophica inversa, autosomal recessive;Failure to thrive;Hyperpigmentation of the skin;Microcephaly;Nail dystrophy;Recessive dystrophic epidermolysis bullosa;Scarring;Scarring alopecia of scalp;Short stature germline;unknown 3 48592915 TTCCCAGCGGATGACTCGACCTCTGCTCCACGAGACCTGGTGCTGTCTGAGCCAAGCAGCC -1 481762 NM_006772.2(SYNGAP1):c.3277C>T (p.Gln1093Ter) SYNGAP1 Jun 29, 2017 MedGen:CN517202 not provided germline 6 33443829 AAACCCCGGCCATCCAGCGGGAATCTATTGCAGTCCCCAGAGCCAAGTTATGGCCCCGCCC 113994162 34315 NM_006517.4(SLC16A2):c.359C>T (p.Ser120Phe) SLC16A2 Mar 09, 2010 MedGen:C0795889,OMIM:300523,Orphanet:ORPHA59 Allan-Herndon-Dudley syndrome not provided X 74421996 GCAACGGCTCCATCTTCGGCATCCATAACTCTGTCGGGATCCTCTACTCCATGCTGCTAGA 746155190 247324 NM_014251.2(SLC25A13):c.775C>T (p.Gln259Ter) SLC25A13 Feb 23, 2010 MedGen:C1853942,OMIM:605814,Orphanet:ORPHA247598 Neonatal intrahepatic cholestasis caused by citrin deficiency paternal 7 96189654 TTCCATACAGAGGAGTTTGTTCTGGCAGCTCAGAAATTTGGTCAGGTTACACCCATGGAAG 587783522 169930 NM_178151.2(DCX):c.130C>T (p.Gln44Ter) DCX Feb 08, 2013 Human Phenotype Ontology:HP:0002282,MedGen:C0008519 Heterotopia germline X 111410269 CACTGTAGCTTCTACCGAACCAGAACCTTGCAGGCACTGAGTAATGAGAAGAAAGCCAAGA 771866012 472249 NM_004273.4(CHST3):c.491C>T (p.Pro164Leu) CHST3 - MedGen:C1840471,OMIM:143095 Spondyloepiphyseal dysplasia with congenital joint dislocations inherited 10 72007522 AGCAGGGCAACATCTTCTACCTCTTCGAGCCGCTGTGGCACATCGAGCGCACAGTGTCCTT 121917921 79463 NM_006920.4(SCN1A):c.5315C>T (p.Ala1772Val) SCN1A Jun 02, 2016 MedGen:C1858673,OMIM:604403;MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002;MedGen:CN517202 Generalized epilepsy with febrile seizures plus, type 2;Severe myoclonic epilepsy in infancy;not provided de novo;germline;unknown 2 165991927 CCTTCCTGGTTGTGGTGAACATGTACATCGCGGTCATCCTGGAGAACTTCAGTGTTGCTAC 137853030 21545 NM_001080463.1(DYNC2H1):c.1759C>T (p.Arg587Cys) DYNC2H1 Jun 01, 2017 MedGen:CN674505;MedGen:C2751311,OMIM:613091,SNOMED CT:254051008 Short-rib polydactyly syndrome type III;Short-rib thoracic dysplasia 3 with or without polydactyly germline;paternal;unknown 11 103125197 GATCGTTTGGTGATTCTTCTGAGAGAAGTTCGTCAGCTCTCTGCACTTGGCTTTGTTATTC 121918591 28047 NM_144563.2(RPIA):c.404C>T (p.Ala135Val) RPIA Apr 01, 2004 MedGen:C1291609,OMIM:608611,Orphanet:ORPHA440706,SNOMED CT:124667004 Deficiency of ribose-5-phosphate isomerase germline 2 88729279 TCGTGGTTGCTCTTCCCTGTCCTCCGCAGGCCCGCCAGCTCATCCTGCAGTATGGCTTGAC 797045014 205022 NM_000435.2(NOTCH3):c.457C>T (p.Arg153Cys) NOTCH3 Apr 22, 2014 MedGen:C1272305,OMIM:125310,SNOMED CT:390936003 Cerebral autosomal dominant arteriopathy with subcortical infarcts and leukoencephalopathy unknown 19 15192182 CTCTGCTCCTGCCCACCTGGCTACCAGGGCCGCAGCTGCCGAAGCGACGTGGATGAGTGCC 397515537 76533 NM_001024630.3(RUNX2):c.1171C>T (p.Arg391Ter) RUNX2 Aug 29, 2013 MedGen:C0008928,OMIM:119600,Orphanet:ORPHA1452,SNOMED CT:65976001 Cleidocranial dysostosis not provided 6 45546910 TCCCTCACTGAGAGCCGCTTCTCCAACCCACGAATGCACTATCCAGCCACCTTTACTTACA 137854571 15842 NM_000038.5(APC):c.3199C>T (p.Gln1067Ter) APC Jun 01, 1992 Human Phenotype Ontology:HP:0006753,MeSH:D013274,MedGen:C0038356,OMIM:613659,SNOMED CT:126824007 Neoplasm of stomach somatic 5 112838793 GAAGATGAAATAAAACAAAGTGAGCAAAGACAATCAAGGAATCAAAGTACAACTTATCCTG 398124636 31519 NM_000146.3(FTL):c.-161C>T FTL Feb 19, 2013 MedGen:C1833213,OMIM:600886,Orphanet:ORPHA163 Hyperferritinemia cataract syndrome germline 19 48965347 GCGGTCCCGCGGGTCTGTCTCTTGCTTCAACAGTGTTTGGACGGAACAGATCCGGGGACTC 28935496 25879 NM_000054.4(AVPR2):c.337C>T (p.Arg113Trp) AVPR2 May 27, 1993 MedGen:C1563705,OMIM:304800 Nephrogenic diabetes insipidus, X-linked germline X 153905843 GACCGCTTCCGTGGGCCAGATGCCCTGTGTCGGGCCGTGAAGTATCTGCAGATGGTGGGCA 137852642 24264 NM_000435.2(NOTCH3):c.397C>T (p.Arg133Cys) NOTCH3 May 03, 2017 MedGen:C1272305,OMIM:125310,SNOMED CT:390936003;Human Phenotype Ontology:HP:0007236,MedGen:C4024918;MedGen:CN517202 Cerebral autosomal dominant arteriopathy with subcortical infarcts and leukoencephalopathy;Recurrent subcortical infarcts;not provided germline;unknown 19 15192242 TGCCTCAGCAGCCCTTGTGCCCACGGTGCCCGCTGCTCAGTGGGGCCCGATGGACGCTTCC 878853904 242695 NM_000267.3(NF1):c.5608C>T (p.Gln1870Ter) NF1 Mar 18, 2016 MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003 Neurofibromatosis, type 1 germline 17 31330357 ACTTGTACCTTTAATTTAAAAATCGAGGGCCAGTTACTAGAGACATCAGGTTTATGTATCC 864309648 215636 NM_002336.2(LRP6):c.56C>T (p.Ala19Val) LRP6 Oct 01, 2015 MedGen:C4225231,OMIM:616724 Tooth agenesis, selective, 7 germline 12 12244655 CACTTACATATTTTTCTTTTTTTGTTCTAGCGGCCCCTTTGTTGCTTTATGCAAACAGACG 121912521 29428 NM_000233.3(LHCGR):c.1730C>T (p.Thr577Ile) LHCGR Feb 01, 1995 MedGen:C0342549,OMIM:176410,Orphanet:ORPHA3000,SNOMED CT:237818003 Gonadotropin-independent familial sexual precocity germline 2 48688067 TTGCTAAGAAAATGGCAATCCTCATCTTCACCGATTTCACCTGCATGGCACCTATCTCTTT 376672665 39683 NM_022137.5(SMOC1):c.718C>T (p.Gln240Ter) SMOC1 Jan 07, 2011 MedGen:C0599973,OMIM:206920 Anophthalmos with limb anomalies germline 14 70010807 GAGAGGCAGAGTGCCCTGGAAGAGGCCCAGCAGAATCCCCGTGAGGGTATTGTCATCCCTG 1131691548 421975 NM_001170629.1(CHD8):c.2854C>T (p.Arg952Ter) CHD8 Sep 01, 2015 MedGen:CN517202 not provided germline 14 21406909 TGGCGTTGTGTTATCATTGATGAAGCCCATCGACTGAAAAACCGTAATTGCAAGCTGCTTG 121917745 28159 NM_000329.2(RPE65):c.1543C>T (p.Arg515Trp) RPE65 Dec 01, 2004 MedGen:C1859844,OMIM:204100;Human Phenotype Ontology:HP:0000547,MeSH:D012174,MedGen:C0035334,OMIM:268000,Orphanet:ORPHA791,SNOMED CT:28835009;MedGen:C3151086,OMIM:613794;MedGen:CN517202 Leber congenital amaurosis 2;Retinitis pigmentosa;Retinitis pigmentosa 20;not provided germline 1 68429835 CTGAATGCCAAGGACTTAAGTGAAGTTGCCCGGGCTGAAGTGGAGATTAACATCCCTGTCA 762281715 268450 NM_005529.6(HSPG2):c.10894C>T (p.Arg3632Ter) HSPG2 Oct 30, 2015 MedGen:C0432208,OMIM:224410,SNOMED CT:93132001;MedGen:C0036391,OMIM:255800,Orphanet:ORPHA800 Lethal Kniest-like syndrome;Schwartz Jampel syndrome type 1 germline 1 21833551 GAGAACAACATGCTGATGCTGCCCTCAGTCCGACCCCAGGACGCAGGTACCTACGTCTGCA 63750347 96671 NM_000251.2(MSH2):c.754C>T (p.Gln252Ter) MSH2 Sep 13, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Hereditary cancer-predisposing syndrome;Lynch syndrome germline 2 47412522 AACCGGTTGTTGAAAGGCAAAAAGGGAGAGCAGATGAATAGTGCTGTATTGCCAGAAATGG 80358223 31221 NM_002353.2(TACSTD2):c.352C>T (p.Gln118Ter) TACSTD2 Apr 01, 1999 MedGen:C0339273,OMIM:204870,Orphanet:ORPHA98957,SNOMED CT:231928002,SNOMED CT:418946006 Lattice corneal dystrophy Type III germline 1 58576805 TGCGACCCCGAGGGCCGCTTCAAGGCGCGCCAGTGCAACCAGACGTCGGTGTGCTGGTGCG 201915239 150469 NM_152617.3(RNF168):c.391C>T (p.Arg131Ter) RNF168 Sep 01, 2011 MedGen:C2677792,OMIM:611943,Orphanet:ORPHA420741 Riddle syndrome germline 3 196487566 TTATTAATCACTTTTAAGGTGGCGGCAGAGCGACGGGCCAGCGAGGAAGAAGAAAACAAAG 137852704 23869 NM_000336.2(SCNN1B):c.1696C>T (p.Arg566Ter) SCNN1B Jun 23, 2016 MedGen:C0221043,OMIM:177200,Orphanet:ORPHA526,SNOMED CT:71275003 Pseudoprimary hyperaldosteronism germline;inherited 16 23380574 GTGGCCTTGGCCAAGAGCCTACGGCAGCGGCGAGCCCAAGCCAGCTACGCTGGCCCACCGC 121909800 22795 NM_001017535.1(VDR):c.1171C>T (p.Arg391Cys) VDR Dec 01, 1996 MedGen:C0268690,OMIM:277440,SNOMED CT:72831007 Vitamin D-dependent rickets, type 2 germline 12 47844859 GCCAAGATGATCCAGAAGCTAGCCGACCTGCGCAGCCTCAATGAGGAGCACTCCAAGCAGT 398123660 99893 NM_001918.3(DBT):c.1291C>T (p.Arg431Ter) DBT Aug 23, 2013 MedGen:C0024776,OMIM:248600,SNOMED CT:27718001 Maple syrup urine disease germline 1 100196413 TTTTTTTTTTTTCATTTCTAGGCCATTCCCCGATTTAACCAGAAAGGAGAAGTATATAAGG 104894673 22461 NM_000554.5(CRX):c.268C>T (p.Arg90Trp) CRX Feb 01, 1999 MedGen:C3151192,OMIM:613829;MedGen:CN517202 Leber congenital amaurosis 7;not provided germline 19 47839335 GCTCTTATCCCCCAGGTTTGGTTCAAGAACCGGAGGGCTAAATGCAGGCAGCAGCGACAGC 121908060 19205 NM_002772.2(TMPRSS15):c.781C>T (p.Gln261Ter) TMPRSS15 Jan 01, 2002 MedGen:C0268416,OMIM:226200,Orphanet:ORPHA168601,SNOMED CT:124498007,SNOMED CT:190952002 Enterokinase deficiency germline 21 18359856 TCTATTTTTTGCTTTTAATTTAGTGTAAACCAAGGACTTTCCATTAAACTGAGCTTCGATG 397509388 59801 NM_201647.3(STAMBP):c.532C>T (p.Arg178Ter) STAMBP May 01, 2013 MedGen:C3280296,OMIM:614261,Orphanet:ORPHA294016 Microcephaly-capillary malformation syndrome germline 2 73847543 ATGATCCGGAACCAGGAGCTAGAAAAAGAGCGACTGAAAATTGTACAGGAGTTTGGGAAGG 876659067 234108 NM_000051.3(ATM):c.3511C>T (p.Gln1171Ter) ATM Sep 06, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 11 108281103 GTTTTATCCTGTAGCCCTATCTGCGAAAAACAGGCTTTGTTTGCCCTGTGTAAATCTGTGA 72556284 103129 NM_000531.5(OTC):c.533C>T (p.Thr178Met) OTC Mar 07, 2016 MedGen:CN517202 not provided germline;unknown X 38401421 ATCCTATCCAGATCCTGGCTGATTACCTCACGCTCCAGGTTGGTTTATTTATTTGTCTTAC -1 442119 NM_000435.2(NOTCH3):c.2953C>T (p.Arg985Cys) NOTCH3 Sep 03, 2014 MedGen:CN517202 not provided germline 19 15181002 GGCGTCTGCAGCGCCGCCCACCCTGGCTTCCGCTGCACCTGCCTCGAGAGCTTCACGGGCC 200287925 151917 NM_002485.4(NBN):c.127C>T (p.Arg43Ter) NBN Oct 30, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0398791,OMIM:251260,Orphanet:ORPHA647,SNOMED CT:234638009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Microcephaly, normal intelligence and immunodeficiency;not provided germline;unknown 8 89982766 ATTCTGATTGAAAATGATCAGTCGATCAGCCGAAATCATGCTGTGTTAACTGCTAACTTTT 121912571 23608 NM_000901.4(NR3C2):c.2017C>T (p.Arg673Ter) NR3C2 Mar 27, 2017 MedGen:C1449842,OMIM:177735,Orphanet:ORPHA171871 Pseudohypoaldosteronism type 1 autosomal dominant germline;paternal 4 148154899 TGGCCTTATCATTTATGGTTTCTTATAGCACGAAAGTCAAAGAAGTTGGGAAAGTTAAAAG 397508778 68703 NM_000492.3(CFTR):c.658C>T (p.Gln220Ter) CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline 7 117535326 CTCCTCATGGGGCTAATCTGGGAGTTGTTACAGGCGTCTGCCTTCTGTGGACTTGGTTTCC 775224457 187650 NM_138387.3(G6PC3):c.130C>T (p.Pro44Ser) G6PC3 May 03, 2016 MedGen:C2675526,OMIM:612541,Orphanet:ORPHA331176 Severe congenital neutropenia 4, autosomal recessive germline 17 44071095 GATCCCAAGATCCTCTTTCTGTTCTACTTCCCCGCGGCCTACTACGCCTCCCGCCGTGTGG 62638185 23043 NM_002905.3(RDH5):c.218C>T (p.Ser73Phe) RDH5 Jun 01, 1999 MedGen:C4016746 Fundus albipunctatus, autosomal recessive germline 12 55721402 CCGGGGCCGAGGACCTGCAGCGGGTGGCCTCCTCCCGCCTCCACACCACCCTGTTGGATAT 118192205 34650 NM_172107.3(KCNQ2):c.727C>T (p.Leu243Phe) KCNQ2 Mar 31, 2016 MedGen:C1852587,OMIM:121200 Benign familial neonatal seizures 1 germline 20 63442495 GTCACTGCCTGGTACATCGGCTTCCTTTGTCTCATCCTGGCCTCGTTCCTGGTGTACTTGG 104894164 31665 NM_001002295.1(GATA3):c.1099C>T (p.Arg367Ter) GATA3 Feb 15, 2009 MedGen:C1840333,OMIM:146255,Orphanet:ORPHA2237 Barakat syndrome germline 10 8073787 ATGAAGAAGGAAGGCATCCAGACCAGAAACCGAAAAATGTCTAGCAAATCCAAAAAGTGCA 386833763 70954 NM_001080522.2(CC2D2A):c.517C>T (p.Arg173Ter) CC2D2A Mar 11, 2016 MedGen:C2676790,OMIM:612284 Meckel syndrome type 6 germline 4 15510217 TACTCAAGAGTCAAGTTCCATGATTCTGCACGAAAAATCAAGCCTAAACCCCAGGTGAGAA -1 440201 NM_001080463.1(DYNC2H1):c.10624C>T (p.Gln3542Ter) DYNC2H1 Jun 01, 2017 MedGen:CN674505 Short-rib polydactyly syndrome type III paternal 11 103257749 CGACTTTTCCAACGAGCTCTACAAAACAAACAGGTAAGCTGTTGGATACCCTGTACCAGAG 111706634 16336 NM_001042702.3(PJVK):c.547C>T (p.Arg183Trp) PJVK Jul 01, 2007 MedGen:C1857744,OMIM:610220 Deafness, autosomal recessive 59 germline 2 178456149 GTGCATGCTGGAATTCGAGGGGAAGCAATGCGGGTAAACCACACTTGTTGGGTTCTCTTAC 1131692148 418956 NM_181507.1(HPS5):c.1417C>T (p.Gln473Ter) HPS5 Mar 14, 2017 MedGen:C3888004,OMIM:614074 Hermansky-Pudlak syndrome 5 unknown 11 18296891 TCAGATGAAGACTCTTGCTCCCTTCACAGCCAAACCCTCTCAGAAGATGAGAGATTTAAAG 121909723 31201 NM_002437.4(MPV17):c.148C>T (p.Arg50Trp) MPV17 Aug 28, 2016 MedGen:C1850406,OMIM:256810,Orphanet:ORPHA255229;MedGen:CN517202 Navajo neurohepatopathy;not provided germline 2 27313032 AGGCGGGGTCTGCAGGAACACCAGAGAGGCCGGACTCTGACCATGGTGTCCCTGGGCTGTG 752616462 361825 NM_001128608.1(MAPKBP1):c.2827C>T (p.Gln943Ter) MAPKBP1 May 22, 2017 MedGen:CN781300,OMIM:617271 Nephronophthisis 20 germline 15 41821674 TTATTGTCACAAGAGGAAGGGGTCTTTGCCCAAGATCTGGAACCTGCACCCATTGAAGATG 121918152 15707 NM_000312.3(PROC):c.658C>T (p.Arg220Trp) PROC Dec 25, 1989 MedGen:C2674321,OMIM:176860 Thrombophilia, hereditary, due to protein C deficiency, autosomal dominant germline 2 127426207 CCGCGGCTCATTGATGGGAAGATGACCAGGCGGGGAGACAGCCCCTGGCAGGTGGGAGGCG 587777778 166144 NM_058179.3(PSAT1):c.296C>T (p.Ala99Val) PSAT1 Sep 04, 2014 MedGen:C4015019,OMIM:616038 Neu-laxova syndrome 2 germline 9 78304839 ACCTCATTGGCTTGAAAGCAGGAAGGTGTGCTGACTATGTGGTGACAGGAGCTTGGTCAGC 397514740 75274 NM_001271.3(CHD2):c.361C>T (p.Arg121Ter) CHD2 Sep 10, 2015 MedGen:C3809278,OMIM:615369 Epileptic encephalopathy, childhood-onset germline 15 92927310 CGGTCAAACCGAAGCAGACAAGAACCATCGCGATTTAATATTAAGGAAGAGGTAAGGAAAA 727502794 171913 NM_006701.4(TXNL4A):c.37C>T (p.Gln13Ter) TXNL4A Mar 28, 2016 MedGen:C1837822,OMIM:608572,Orphanet:ORPHA1200;MedGen:C1837822,OMIM:608572,Orphanet:ORPHA1200 Burn-McKeown syndrome;Burn-McKeown syndrome germline 18 79988356 TACATGCTCCCGCACCTGCACAACGGCTGGCAGGTGGACCAGGCCATCCTCTCGGAGGAGG 794727473 193341 NM_014714.3(IFT140):c.3991C>T (p.Gln1331Ter) IFT140 Feb 27, 2015 MedGen:C1849437,OMIM:266920,Orphanet:ORPHA140969 Renal dysplasia, retinal pigmentary dystrophy, cerebellar ataxia and skeletal dysplasia germline 16 1519930 AGCCCCCTGGACCAGGAGACCAGGCTGGCGCAGCTGCAGAGCAGGATGGCACTGGTGAAGA 587776935 48413 NM_005465.4(AKT3):c.1393C>T (p.Arg465Trp) AKT3 Aug 08, 2016 Human Phenotype Ontology:HP:0005306,MedGen:C0085666;Human Phenotype Ontology:HP:0001263,MedGen:C4020875;Human Phenotype Ontology:HP:0000256,MedGen:C2243051,OMIM:248000;MedGen:C4014738,OMIM:615937;Human Phenotype Ontology:HP:0002126,MedGen:C0266464,Orphanet:ORPHA35981 Capillary hemangiomas;Global developmental delay;Macrocephaly;Megalencephaly-polymicrogyria-polydactyly-hydrocephalus syndrome 2;Polymicrogyria germline;unknown 1 243505296 GATGGTATGGACTGCATGGACAATGAGAGGCGGCCGCATTTCCCTCAATTTTCCTACTCTG 113993998 34397 NM_016038.3(SBDS):c.652C>T (p.Arg218Ter) SBDS Jul 17, 2008 MedGen:C0272170,OMIM:260400,Orphanet:ORPHA811,SNOMED CT:89454001 Shwachman syndrome not provided 7 66988472 CAGGTATGTCTGATTGACCCGGGCTGCTTCCGAGAAATTGATGAGCTAATAAAAAAGGAAA 104893737 19899 NM_023067.3(FOXL2):c.157C>T (p.Gln53Ter) FOXL2 Dec 01, 2005 MedGen:C2931135 Blepharophimosis, ptosis, and epicanthus inversus syndrome type 1 germline 3 138946566 GGGACAGCCCCGGAGAAGCCGGACCCGGCGCAGAAGCCCCCGTACTCGTACGTGGCGCTCA 119471021 19164 NM_022081.5(HPS4):c.1891C>T (p.Gln631Ter) HPS4 Oct 11, 2012 MedGen:C3484357,OMIM:614073 Hermansky-Pudlak syndrome 4 germline 22 26457923 GTGGCCACCCCGCAGGATCGCCGCTTCCTCCAGGCCGTCAGCCTGATGCATAGCGAATTTG 587776983 263169 NM_006087.3(TUBB4A):c.4C>T (p.Arg2Trp) TUBB4A Jul 05, 2016 MedGen:C2676244,OMIM:612438,Orphanet:ORPHA139441 Leukodystrophy, hypomyelinating, 6 germline 19 6502209 GCCGCGTCCACCCTCAGCGCCACCGCCATGCGGGAGATCGTGCACCTGCAGGCCGGCCAGT 113994153 17161 NM_207346.2(TSEN54):c.736C>T (p.Gln246Ter) TSEN54 Sep 08, 2009 MedGen:C1856974,OMIM:225753,Orphanet:ORPHA166063 Pontocerebellar hypoplasia type 4 germline 17 75521817 CAGCCCAGCCAATGCCCAGAGGAGAAACCCCAGGAGTCAAGCCCCATGAAGGGCCCAGGGG 750447037 264204 NM_020732.3(ARID1B):c.5338C>T (p.Gln1780Ter) ARID1B Feb 28, 2017 MedGen:CN517202 not provided germline 6 157206479 GCCGCTGCAGACCCAAAGGAGAAGCCCAAGCAAGCCAGTAAGTTCGACAAGCTGCCAATAA 367543061 40176 NM_023073.3(CPLANE1):c.4006C>T (p.Arg1336Trp) CPLANE1 Apr 18, 2017 MedGen:C3553264,OMIM:614615;MedGen:CN517202 Joubert syndrome 17;not provided germline;unknown 5 37187488 GAATGGGCTTATAGAATGCTGCCTTTCTCTCGGTTTTTTAATATGGAAGAACTTATTCAGG 118204058 16563 NM_000237.2(LPL):c.397C>T (p.Gln133Ter) LPL Jul 01, 1990 MedGen:C0023817,OMIM:238600,Orphanet:ORPHA309015,SNOMED CT:238086005,SNOMED CT:275598004 Hyperlipoproteinemia, type I germline 8 19951916 GTGTCCGCGGGCTACACCAAACTGGTGGGACAGGATGTGGCCCGGTTTATCAACTGGATGG 267606959 28555 NM_002693.2(POLG):c.3218C>T (p.Pro1073Leu) POLG Aug 16, 2016 MedGen:C3150914,OMIM:613662;MedGen:C0205710,OMIM:203700,Orphanet:ORPHA726,SNOMED CT:20415001;MedGen:CN517202 Mitochondrial DNA depletion syndrome 4B, MNGIE type;Progressive sclerosing poliodystrophy;not provided germline 15 89318986 GCATTGCTACGTCTGACATACCACGTACCCCGGTGCTGGGCTGCTGCATCAGCCGAGCCCT 5030851 15628 NM_000277.2(PAH):c.842C>T (p.Pro281Leu) PAH Oct 19, 2017 MedGen:C0031485,OMIM:261600,Orphanet:ORPHA716,SNOMED CT:154735006;MedGen:CN517202 Phenylketonuria;not provided germline;unknown 12 102852815 ATGGATCCAAGCCCATGTATACCCCCGAACCGTGAGTACTGTCCTCCAGCTACCAGTTGCC -1 459569 NM_000170.2(GLDC):c.2527C>T (p.Arg843Ter) GLDC Jul 11, 2017 Human Phenotype Ontology:HP:0008288,MedGen:C0751748,OMIM:605899,Orphanet:ORPHA407,SNOMED CT:237939006 Non-ketotic hyperglycinemia germline 9 6550845 GCGATATTAAATGCCAACTACATGGCCAAGCGATTAGAAACACACTACAGAATTCTTTTCA 752599948 416153 NM_021222.2(PRUNE1):c.889C>T (p.Arg297Trp) PRUNE1 Sep 19, 2017 MedGen:CN243994,OMIM:617481 Neurodevelopmental disorder with microcephaly, hypotonia, and variable brain anomalies germline 1 151028900 ATCTTTTTCAACACTCACAATGAGCCAGTGCGGCAGTTGGCTATTTTCTGTCCCCATGTGG 587777133 106527 NM_144672.3(OTOA):c.1879C>T (p.Pro627Ser) OTOA Sep 01, 2013 MedGen:C1846896,OMIM:607039 Deafness, autosomal recessive 22 germline 16 21722977 TCTATGCCACCTTTCCTCTTGGCTGCACTCCCGTAAGTGAACATCAGCCCCCACCTTCTGG 149491038 48029 NM_001558.3(IL10RA):c.784C>T (p.Arg262Cys) IL10RA Aug 01, 2011 MedGen:C4016214 Inflammatory bowel disease 28 germline 11 117995684 TACTGCCTGGCCCTCCAGCTGTATGTGCGGCGCCGAAAGAAGCTACCCAGTGTCCTGGTGA 587784234 170172 NM_002547.2(OPHN1):c.496C>T (p.Gln166Ter) OPHN1 Feb 08, 2013 MedGen:C1845366,OMIM:300486,Orphanet:ORPHA137831 Mental retardation X-linked with cerebellar hypoplasia and distinctive facial appearance germline X 68213963 TTTGTTTTCCTTCTTCTACAGGCAGACCTACAGGTGGACAAGGAGAGGCACAATTTTTTCG 1131692220 424336 NM_000527.4(LDLR):c.2044C>T (p.Leu682Phe) LDLR Mar 30, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11120426 CTGAGCAATGGCGGCTGCCAGTATCTGTGCCTCCCTGCCCCGCAGATCAACCCCCACTCGC 398124099 100749 NM_004006.2(DMD):c.961-5831C>T DMD Jul 25, 2017 MedGen:C3668940,OMIM:302045;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Dilated cardiomyopathy 3B;Duchenne muscular dystrophy germline X 32650983 AGAACCACCAGTTACCTTTGTGACCTTTGGCAAGTCATCTAATTTTTCTATTTCCATTTCC 747483368 427500 NM_001009944.2(PKD1):c.2215C>T (p.Gln739Ter) PKD1 - MedGen:C0085548,OMIM:263200,Orphanet:ORPHA731,SNOMED CT:28770003 Autosomal recessive polycystic kidney disease germline 16 2114808 TGCTCGCCGGCTCCCGGCCACCCTGGTCCCCGGGCCCCGTACCTCTCCGCCAACGCCTCGT 80358994 67054 NM_000059.3(BRCA2):c.7681C>T (p.Gln2561Ter) BRCA2 Nov 02, 2016 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145;MedGen:CN169374 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome;not specified germline 13 32357805 AAAATTAACAGCAAAAATGCAGAGTCTTTTCAGTTTCACACTGAAGATTATTTTGGTAAGG 886039544 260011 NM_000545.6(HNF1A):c.779C>T (p.Thr260Met) HNF1A Feb 23, 2016 MedGen:CN517202 not provided germline 12 120994229 AGGCACAGGGGCTGGGCTCCAACCTCGTCACGGAGGTGCGTGTCTACAACTGGTTTGCCAA 121908095 19314 NM_005857.4(ZMPSTE24):c.743C>T (p.Pro248Leu) ZMPSTE24 Nov 01, 2010 MedGen:C1837756,OMIM:608612,Orphanet:ORPHA90154;MedGen:CN517202 Mandibuloacral dysplasia with type B lipodystrophy;not provided germline 1 40272009 TTGAAGTAATGGCAAAGAGTATTGACTTTCCTTTGACGAAGGTGTATGTTGTGGAAGGTAA 1064793163 411165 NM_000425.4(L1CAM):c.1408C>T (p.Gln470Ter) L1CAM Feb 06, 2017 MedGen:CN517202 not provided germline X 153868699 AGGCTGGACGAGGATGGGACAACAGTGCTTCAGGACGAACGCTTCTTCCCCTATGCCAATG 45471299 27365 NM_199292.2(TH):c.1481C>T (p.Thr494Met) TH Oct 24, 2016 Human Phenotype Ontology:HP:0001332,MedGen:C0013421;MedGen:C1854299,OMIM:605407 Dystonia;Segawa syndrome, autosomal recessive germline 11 2164339 GCCCCTTCTCCGTGAAGTTCGACCCGTACACGCTGGCCATCGACGTGCTGGACAGCCCCCA 144948296 442483 NM_153700.2(STRC):c.4027C>T (p.Gln1343Ter) STRC Dec 11, 2017 MedGen:C1863561,OMIM:603720 Deafness, autosomal recessive 16 inherited 15 43604750 GGGACAGAGAGCACACGACAGATCCCCCTACAGATCCTGCTGTCCCATCTCAGTCAGCTGC 61749729 153373 NM_004992.3(MECP2):c.622C>T (p.Gln208Ter) MECP2 Sep 05, 2002 MedGen:C0035372,OMIM:312750,Orphanet:ORPHA778,SNOMED CT:68618008 Rett syndrome unknown X 154031206 AGACCCAAGGCGGCCACGTCAGAGGGTGTGCAGGTGAAAAGGGTCCTGGAGAAAAGTCCTG 121912746 32804 NM_000342.3(SLC4A1):c.1838C>T (p.Ser613Phe) SLC4A1 Oct 01, 1997 MedGen:C0259810,OMIM:179800 Renal tubular acidosis, distal, autosomal dominant germline 17 44255259 GGGTCATCGGGGACTTCGGGGTCCCCATCTCCATCCTGATCATGGTCCTGGTGGATTTCTT 145646425 45871 NM_014956.4(CEP164):c.1726C>T (p.Arg576Ter) CEP164 Oct 08, 2012 MedGen:C3541853,OMIM:614845 Nephronophthisis 15 germline 11 117387204 GATGATATGCCATTCCCCACCCATGGTAGGCGATCCACAGAGCCTGTGGCTCCCCCAGAGC -1 463004 NM_003482.3(KMT2D):c.4204C>T (p.Gln1402Ter) KMT2D Jun 19, 2017 MedGen:C0796004,Orphanet:ORPHA2322,SNOMED CT:313426007 Kabuki syndrome germline 12 49047997 GGCCACCTCCTTGCCTGTTCGCAGTGCTCTCAGTGCTATCACCCTTACTGTGTCAACAGCA 80358831 46567 NM_000059.3(BRCA2):c.5980C>T (p.Gln1994Ter) BRCA2 Mar 16, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C0677776,Orphanet:ORPHA145 Breast-ovarian cancer, familial 2;Familial cancer of breast;Hereditary breast and ovarian cancer syndrome germline 13 32340335 AAATCTGTCCAGGTATCAGATGCTTCATTACAAAACGCAAGACAAGTGTTTTCTGAAATAG 62507348 108524 NM_000277.2(PAH):c.694C>T (p.Gln232Ter) PAH May 19, 2017 MedGen:C0031485,OMIM:261600,Orphanet:ORPHA716,SNOMED CT:154735006;MedGen:CN517202 Phenylketonuria;not provided germline;unknown 12 102855148 GATAACATTCCCCAGCTGGAAGACGTTTCTCAGTTCCTGCAGAGTAAGTCCACATCAGGGT 863224957 213829 NM_000070.2(CAPN3):c.1465C>T (p.Arg489Trp) CAPN3 Sep 19, 2016 MedGen:C1869123,OMIM:253600,Orphanet:ORPHA267;MedGen:CN517202 Limb-girdle muscular dystrophy, type 2A;not provided germline 15 42401751 AGCTTCCTGGTGGCCCTGATGCAGAAGAACCGGCGGAAGGACCGGAAGCTAGGGGCCAGTC 59206042 426920 NM_001171.5(ABCC6):c.2659C>T (p.Arg887Cys) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16175918 ACCTCTGCAGGCAGGAGGCCCGAGCTTAGACGCGAGAGGTGAGTCCACCATGGTGCCACAC 118192251 34269 NM_004519.3(KCNQ3):c.988C>T (p.Arg330Cys) KCNQ3 Nov 10, 2016 MedGen:CN200689,Orphanet:ORPHA1949;MedGen:C1852581,OMIM:121201 Benign familial neonatal seizures;Benign familial neonatal seizures 2 germline 8 132174295 GGAGACAAGACACCCAAAACGTGGGAAGGCCGTCTGATTGCCGCCACCTTTTCCTTAATTG 387907168 40272 NM_181755.2(HSD11B1):c.409C>T (p.Arg137Cys) HSD11B1 Mar 08, 2011 MedGen:C3553382,OMIM:614662 Cortisone reductase deficiency 2 germline 1 209707020 AATCTTTTTCATGATGATATTCACCATGTGCGCAAAAGCATGGAAGTCAACTTCCTCAGTT 74315476 18120 NM_000487.5(ARSA):c.1114C>T (p.Arg372Trp) ARSA Apr 12, 2016 MedGen:C0023522,OMIM:250100,Orphanet:ORPHA512,SNOMED CT:396338004;MedGen:C4017094 Metachromatic leukodystrophy;Metachromatic leukodystrophy, severe germline;unknown 22 50625675 CGTGACCCCTGACTCTGCCCCCAGAGCCCTCGGCAGTCTCTCTTCTTCTACCCGTCCTACC 1085307118 404675 NM_017414.3(USP18):c.652C>T (p.Gln218Ter) USP18 Mar 26, 2017 MedGen:CN241835,OMIM:617397 Pseudo-torch syndrome 2 germline 22 18169868 GGACAGGAGGACGCCCTGCACTGCTTCTTCCAGCCCAGGGAGTTATCAAGCAAAAGCAAGT 1057519512 362297 NM_001003694.1(BRPF1):c.2497C>T (p.Arg833Ter) BRPF1 Oct 24, 2017 MedGen:C4310617,OMIM:617333;MedGen:CN517202 Intellectual developmental disorder with dysmorphic facies and ptosis;not provided germline 3 9743763 ACGGCACTGCGGCGGAAGCTTGCCCATCAGCGAGAGACGGGACGTGATGGCCCTGAGCGGC 876659625 232270 NM_001128425.1(MUTYH):c.421C>T (p.Gln141Ter) MUTYH Jun 04, 2015 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 1 45333138 TGGGTCTCAGAGGTCATGCTGCAGCAGACCCAGGTTGCCACTGTGATCAACTACTATACCG -1 482243 NM_003639.4(IKBKG):c.868C>T (p.Gln290Ter) IKBKG Nov 01, 2017 MedGen:CN517202 not provided germline X 154562909 GTGATCGATAAGCTGAAGGAGGAGGCCGAGCAGCACAAGATTGTGATGGAGACCGTTCCGG 786205208 188055 NM_001008537.2(NEXMIF):c.1882C>T (p.Arg628Ter) NEXMIF Oct 06, 2017 MedGen:C3806730,OMIM:300912,Orphanet:ORPHA85277;MedGen:CN517202 Mental retardation, X-linked 98;not provided de novo;germline X 74742675 GAGGTGTCATTTCTGCCACCTGCTCGCAAACGAAAATCTAAACTTGGCAACAGGCACAGGA 778139192 214348 NM_198525.2(KIF7):c.3331C>T (p.Arg1111Ter) KIF7 Feb 23, 2015 Gene:46,MedGen:C0796147,OMIM:200990,Orphanet:ORPHA36 Acrocallosal syndrome, Schinzel type unknown 15 89629561 GGCTGGGTCTTGGGACAGGTGGTGACGCTCCGAGAGGAGCAGCACCAGCAGCAGATTGCCT 201541131 214454 NM_000283.3(PDE6B):c.1678C>T (p.Arg560Cys) PDE6B Jul 01, 2015 Human Phenotype Ontology:HP:0000547,MeSH:D012174,MedGen:C0035334,OMIM:268000,Orphanet:ORPHA791,SNOMED CT:28835009;MedGen:C3151107,OMIM:613801 Retinitis pigmentosa;Retinitis pigmentosa 40 germline;unknown 4 662197 GGGTACCGGAGAATCACCTACCACAACTGGCGCCACGGCTTCAACGTGGCCCAGACGATGT 121908952 21727 NM_001015880.1(PAPSS2):c.1000C>T (p.Arg334Ter) PAPSS2 Nov 06, 2014 MedGen:C2748515,OMIM:612847,Orphanet:ORPHA93282 Spondyloepimetaphyseal dysplasia, pakistani type germline 10 87727403 GCACATGGTGGACGGAGGGTAGCTATCTTACGAGACGCTGAATTCTATGAACACAGAAAAG 564652222 180494 NM_000051.3(ATM):c.6679C>T (p.Arg2227Cys) ATM Sep 08, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Ataxia-telangiectasia syndrome;Hereditary cancer-predisposing syndrome;not provided germline 11 108325416 TTTAGTTTTCAGGAGCCTATCATGGCTCTACGCACAGTCATTTTGGAGATCCTGATGGAAA 397514695 59640 NM_014254.2(RXYLT1):c.1018C>T (p.Arg340Ter) RXYLT1 Apr 26, 2013 MedGen:C3554381,OMIM:615041 Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type a, 10 germline 12 63808778 TGCCCGGTCGGAGTAAACACAGAATGCTATCGAATCTATGAGGCTTGCTCCTATGGCTCCA 137852401 25229 NM_000132.3(F8):c.881C>T (p.Thr294Ile) F8 Jan 01, 1995 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154969459 AAGTGCACTCAATATTCCTCGAAGGTCACACATTTCTTGTGAGGAACCATCGCCAGGCGTC -1 426430 NM_001456.3(FLNA):c.3775C>T (p.Gln1259Ter) FLNA Jun 06, 2017 MedGen:CN517202 not provided germline X 154360020 GTGGAACCTGCGGTGGACACTTCCGGTGTCCAGTGCTATGGGCCTGGTATTGAGGGCCAGG 121434584 31096 NM_002103.4(GYS1):c.1384C>T (p.Arg462Ter) GYS1 Oct 11, 2007 MedGen:C1969054,OMIM:611556,Orphanet:ORPHA137625 Glycogen storage disease 0, muscle germline 19 48974658 TCCTCAGACCCCATCCTGACCACCATCCGCCGAATCGGCCTCTTCAATAGCAGTGCCGACA 797045139 205416 NM_000267.3(NF1):c.5425C>T (p.Arg1809Cys) NF1 Jul 28, 2017 MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003;MedGen:CN517202 Neurofibromatosis, type 1;not provided de novo;germline;unknown 17 31327718 ATTGTCCAGTCTATCATTCATATCCGGACCCGCTGGGAACTGTCACAGCCCGACTCTATCC 756953958 181567 NM_017534.5(MYH2):c.533C>T (p.Thr178Ile) MYH2 Jun 01, 2014 MedGen:C1854106,OMIM:605637 Inclusion body myopathy 3 germline 17 10544100 TAGACCGAGAGAATCAGTCAATCCTGATCACGTAAGTAGATTTTATGCTTTCTTTACATGG 761767572 434152 NM_174936.3(PCSK9):c.1426C>T (p.Arg476Cys) PCSK9 - MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 1 55058570 GGGCCTACACGGATGGCCACAGCCGTCGCCCGCTGCGCCCCAGATGAGGAGCTGCTGAGCT 374385878 141318 NM_004318.3(ASPH):c.2203C>T (p.Arg735Trp) ASPH May 01, 2014 MedGen:C1832167,OMIM:601552,Orphanet:ORPHA412022 Facial dysmorphism, lens dislocation, anterior segment abnormalities, and spontaneous filtering blebs germline 8 61503433 CACGAGGTATGGCAGGATGCCTCATCTTTCCGGCTGATATTCATCGTGGATGTGTGGCATC 121909567 33073 NM_000488.3(SERPINC1):c.391C>T (p.Leu131Phe) SERPINC1 Apr 11, 1990 MedGen:C0272375,OMIM:613118,Orphanet:ORPHA82,SNOMED CT:36351005 Antithrombin III deficiency germline 1 173914570 ATGACCAAGCTGGGTGCCTGTAATGACACCCTCCAGCAACTGATGGAGGTACGACCAAAGG 137852404 25234 NM_000132.3(F8):c.923C>T (p.Ser308Leu) F8 Feb 01, 1993 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154969417 GGAACCATCGCCAGGCGTCCTTGGAAATCTCGCCAATAACTTTCCTTACTGCTCAAACACT 121434619 25952 NM_001123383.1(BCOR):c.2926C>T (p.Arg976Ter) BCOR Oct 01, 2009 MedGen:C1846265,OMIM:300166,Orphanet:ORPHA2712 Oculofaciocardiodental syndrome germline X 40072420 ATCGCCAACTCAGCGGGTTACGTGGGTGACCGATTCAAATGTGTCACTACCGAACTGTATG 794726845 187702 NM_001165963.1(SCN1A):c.5662C>T (p.Gln1888Ter) SCN1A Dec 20, 2014 MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002 Severe myoclonic epilepsy in infancy de novo 2 165991613 GAGAGTGGAGAGATGGATGCTCTACGAATACAGATGGAAGAGCGATTCATGGCTTCCAATC 121909263 23371 NM_000388.3(CASR):c.413C>T (p.Thr138Met) CASR May 01, 1995 MedGen:C1809471,OMIM:145980,Orphanet:ORPHA93372,SNOMED CT:190868007 Hypocalciuric hypercalcemia, familial, type 1 germline 3 122257308 TCTGCAACTGCTCAGAGCACATTCCCTCTACGATTGCTGTGGTGGGAGCAACTGGCTCAGG 144500145 202960 NM_002693.2(POLG):c.2554C>T (p.Arg852Cys) POLG Aug 02, 2017 MedGen:C1850303,OMIM:258450,Orphanet:ORPHA254886;MedGen:C1843851,OMIM:607459,Orphanet:ORPHA70595;MedGen:CN517202 Cerebellar ataxia infantile with progressive external ophthalmoplegia;Sensory ataxic neuropathy, dysarthria, and ophthalmoparesis;not provided germline;unknown 15 89321780 CCCCAAGTGGTGACTGCCGGCACCATCACTCGCCGGGCTGTGGAGCCCACATGGCTCACCG 766665118 430076 NM_005912.2(MC4R):c.449C>T (p.Thr150Ile) MC4R Oct 18, 2016 MedGen:C0028754,OMIM:601665,Orphanet:ORPHA71529,SNOMED CT:414916001;MedGen:CN233047 Obesity;Obesity, autosomal dominant germline 18 60371901 TGCTTTCAATTGCAGTGGACAGGTACTTTACTATCTTCTATGCTCTCCAGTACCATAACAT 79746977 440056 NM_024753.4(TTC21B):c.2500C>T (p.Gln834Ter) TTC21B Jun 01, 2017 MedGen:C0024507,OMIM:263520,SNOMED CT:72922008 Short rib-polydactyly syndrome, Majewski type maternal 2 165907746 CTGTCAGCTCTCATGGAGGATGGACGTTGTCAAGTTCTTCTAGCAAAAGTTTATAGTAAAA 121909106 22299 NM_005251.2(FOXC2):c.374C>T (p.Ser125Leu) FOXC2 Sep 15, 2005 MedGen:C0265345,OMIM:153400,Orphanet:ORPHA33001,SNOMED CT:8634009 Distichiasis-lymphedema syndrome germline 16 86567709 GCTGGCAGAACAGCATCCGCCACAACCTCTCGCTCAACGAGTGCTTCGTCAAGGTGCCCCG 35333334 46988 NM_024312.4(GNPTAB):c.3613C>T (p.Arg1205Ter) GNPTAB May 10, 2012 MedGen:C2673377,OMIM:252500,Orphanet:ORPHA576;MedGen:C0033788,OMIM:252600,Orphanet:ORPHA423461,SNOMED CT:65764006 I cell disease;Pseudo-Hurler polydystrophy not provided 12 101749181 GCTTTCTTCTCTCTGCACAGGAGGGCTTATCGAGACAAATTGAAGTTTTGGACCCATTGTG 1114167596 419658 NM_000038.5(APC):c.4549C>T (p.Gln1517Ter) APC Jun 01, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 5 112840143 AGTGCTCTGAGCCTCGATGAGCCATTTATACAGAAAGATGTGGAATTAAGAATAATGCCTC 1057518273 360289 NM_002968.2(SALL1):c.1393C>T (p.Gln465Ter) SALL1 Nov 23, 2016 MedGen:CN517202 not provided germline 16 51140829 GCGAAGGTCTTTGGGAGTGACAGTGCCTTGCAGATCCACTTGCGTTCCCATACCGGAGAGA 104894419 22712 NM_002312.3(LIG4):c.2440C>T (p.Arg814Ter) LIG4 Apr 26, 2016 MedGen:C1847827,OMIM:606593,Orphanet:ORPHA99812;MedGen:CN517202 Lig4 syndrome;not provided germline;paternal;unknown 13 108208829 TCCTGGGATTGCTCTCCTCTCAGTATGTTTCGACGCCACACCGTTTATTTGGACTCGTATG 797044883 205286 NM_019066.4(MAGEL2):c.1912C>T (p.Gln638Ter) MAGEL2 Sep 26, 2017 MeSH:D030342,MedGen:C0950123;MedGen:C3809877,OMIM:615547,Orphanet:ORPHA398069;MedGen:CN517202 Inborn genetic diseases;Schaaf-yang syndrome;not provided germline;unknown 15 23645831 CAGCCCCTGCCTGCCCAGGAGGCCCAGAGGCAGGCTCCCCCCTTGGTCCAGCTGGAGCAGC 121909681 31243 NM_000821.6(GGCX):c.1426C>T (p.Arg476Cys) GGCX Mar 01, 2007 MedGen:C1835813,OMIM:610842,Orphanet:ORPHA91135 Pseudoxanthoma elasticum-like disorder with multiple coagulation factor deficiency germline 2 85552429 TACTTTGATATTTGGGTCTCCATCAATGACCGCTTCCAGCAGAGGTGGGCAAGGGGAGCAG 118203933 15955 NM_000067.2(CA2):c.319C>T (p.His107Tyr) CA2 Apr 01, 1996 MedGen:C0345407,OMIM:259730,SNOMED CT:254122007 Osteopetrosis with renal tubular acidosis germline 8 85473779 TGGGGTTCACTTGATGGACAAGGTTCAGAGCATACTGTGGATAAAAAGAAATATGCTGCAG 398124274 101518 NM_014795.3(ZEB2):c.1381C>T (p.Gln461Ter) ZEB2 Aug 10, 2012 MedGen:C1856113,OMIM:235730,Orphanet:ORPHA2152 Mowat-Wilson syndrome germline 2 144399806 CCCACCATGAATAGTAATTTAAGTGAGGTACAAAAGGTTCTACAGATTGTGGACAATACTG 730882260 181378 NM_006063.2(KLHL41):c.1238C>T (p.Ser413Leu) KLHL41 Mar 04, 2015 MedGen:C3810384,OMIM:615731 Nemaline myopathy 9 germline 2 169514701 TTGCAGGCAAAGACCTTCAAACAGAGGCTTCGCTGGATTCAGTATTATGCTATGATCCTGT 1060501395 401990 NM_003079.4(SMARCE1):c.313C>T (p.Arg105Ter) SMARCE1 Aug 15, 2016 MedGen:C1333989,OMIM:607174 Meningioma, familial germline 17 40636451 GAGATTGGCAAGATTATTGGTGGCATGTGGCGAGATCTCACTGATGAAGAAAAACAAGAAT 776813259 227249 NM_005630.2(SLCO2A1):c.1807C>T (p.Arg603Ter) SLCO2A1 Mar 18, 2016 MedGen:C3280800,OMIM:614441 Primary hypertrophic osteoarthropathy, autosomal recessive 2 germline 3 133935781 GCCTGCGCCTACTATGACAACGATGCTCTCCGAGACAGGTGAGGGCCCATCATGTATGTGT 121434426 21754 NM_004629.1(FANCG):c.1066C>T (p.Gln356Ter) FANCG Jan 01, 2000 MedGen:C3469527,OMIM:614082 Fanconi anemia, complementation group G germline 9 35076442 ACCAAGCACATACTAGCAAGCAGGTGCCTACAGACGGGGAGGTGAGGTTCCCCTTGCTCAC 119456966 17666 NM_001037633.1(SIL1):c.1312C>T (p.Gln438Ter) SIL1 Nov 21, 2012 MedGen:C0024814,OMIM:248800,Orphanet:ORPHA559,SNOMED CT:80734006;MedGen:CN517202 Marinesco-Sjögren syndrome;not provided germline 5 138947191 GAGTACCAGGTGCTGGCCAGCCTGGAGCTGCAGGATGGTGAGGACGAGGGCTACTTCCAGG 104893753 20124 NM_015560.2(OPA1):c.1096C>T (p.Arg366Ter) OPA1 Aug 08, 2012 MedGen:C0338508,OMIM:165500,Orphanet:ORPHA98672,SNOMED CT:2065009 Dominant hereditary optic atrophy germline 3 193643005 CTTGCAGCATTAAGACATGAAATAGAACTTCGAATGAGGAAAAATGTGAAAGAAGGCTGTA 74315499 18331 NM_000268.3(NF2):c.1021C>T (p.Arg341Ter) NF2 Jun 19, 2017 MedGen:C0027832,OMIM:101000,Orphanet:ORPHA637,SNOMED CT:92503002;MedGen:CN517202 Neurofibromatosis, type 2;not provided germline 22 29671847 CCCTCGCAGATGGAGCGGCAGCGCCTCGCTCGAGAGAAGCAGATGAGGGAGGAGGCTGAAC 104893851 18199 NM_172250.2(MMAA):c.433C>T (p.Arg145Ter) MMAA Jun 21, 2017 Human Phenotype Ontology:HP:0002912,MedGen:C0268583,SNOMED CT:42393006;MedGen:C1855109,OMIM:251100,Orphanet:ORPHA79310;MedGen:CN517202 Methylmalonic acidemia;Methylmalonic aciduria cblA type;not provided germline;unknown 4 145639572 CAATCAAATAAAGGAAAACCACTAGCATTTCGAGTAGGTCAGTCTTTTTTGTGTGTTTTCT 794727636 194378 NM_003494.3(DYSF):c.265C>T (p.Arg89Ter) DYSF Mar 17, 2015 MedGen:C1850889,OMIM:253601,Orphanet:ORPHA268;MedGen:C1850808,OMIM:254130,Orphanet:ORPHA45448 Limb-girdle muscular dystrophy, type 2B;Miyoshi muscular dystrophy 1 germline 2 71503242 AGGTTCCTGGGGGAAGCCAAGGTCCCACTCCGAGAGGTCCTCGCCACCCCTAGTCTGTCCG 878853172 237574 NM_001168272.1(ITPR1):c.2137C>T (p.Arg713Ter) ITPR1 Jul 20, 2016 MedGen:C0431401,OMIM:206700,Orphanet:ORPHA1065,SNOMED CT:253176002 Gillespie syndrome germline 3 4670904 CAGGATGCTAAAGAAGGGCAGAAGGAGGACCGAGACGTTCTCAGCTACTACAGGTGCGTGG 397514492 45892 NM_005340.6(HINT1):c.184C>T (p.Gln62Ter) HINT1 Oct 01, 2012 MedGen:CN074193,OMIM:137200 Neuromyotonia and axonal neuropathy, autosomal recessive germline 5 131162604 TTTCTGGTGATACCCAAGAAACATATATCCCAGATTTCTGTGGCAGAAGATGATGATGAAA 370444838 439710 NM_005956.3(MTHFD1):c.146C>T (p.Ser49Phe) MTHFD1 Nov 21, 2017 na COMBINED IMMUNODEFICIENCY AND MEGALOBLASTIC ANEMIA germline 14 64411109 TATTATTCTAGGTTGGCAACAGAGATGATTCCAATCTTTATATAAATGTGAAGCTGAAGGC 796052465 202827 NM_005249.4(FOXG1):c.667C>T (p.Gln223Ter) FOXG1 Jun 24, 2016 MedGen:CN517202 not provided germline 14 28767946 AAGAACTTCCCTTACTACCGCGAGAACAAGCAGGGCTGGCAGAACTCCATCCGCCACAATC 1060503433 402157 NM_213607.2(CCDC103):c.115C>T (p.Gln39Ter) CCDC103 Aug 16, 2016 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244 Ciliary dyskinesia germline 17 44901113 GAGAATGCTGCCAAGTTACGGGCAGTGGAACAGAGGGTGGCTTCCTATGAGGAGTTCAGGT 1064796511 409476 NM_000548.4(TSC2):c.328C>T (p.Gln110Ter) TSC2 Oct 06, 2017 MedGen:CN517202 not provided germline 16 2053444 GCGGTGCTGGCTCTGCTGAAGGCCATCGTGCAGGGGCAGGTAAGGCCCAGGGCGACGCTGG 786205698 188221 NM_001288953.1(TTC7A):c.1474C>T (p.Gln492Ter) TTC7A Apr 01, 2014 MedGen:C0220744,OMIM:243150,Orphanet:ORPHA436252,SNOMED CT:95472001 Multiple gastrointestinal atresias germline 2 47024294 TGTCACTCCCTCTCCCCACACAGGGCTCAGCAGCTGGCGCCCAGTGACCCCCAGGTCATCC 1135402884 425173 NM_001042492.2(NF1):c.6211C>T (p.Gln2071Ter) NF1 Feb 02, 2017 MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003 Neurofibromatosis, type 1 germline 17 31336698 ACATGCTTATCTCCAACTCCTACTTTAGAACAACATCTTATGTGGGATGATATTGCTATTT 886044708 275509 NM_002968.2(SALL1):c.727C>T (p.Gln243Ter) SALL1 Sep 22, 2016 MedGen:CN034849,OMIM:107480 Townes-Brocks syndrome 1 germline 16 51141495 CTCCTAGCTCTGCAGCAGCAGCAGATCCACCAGCTGCAATTGATCGAACAGATTCGTCACC -1 263819 NM_053025.3(MYLK):c.4372C>T (p.Gln1458Ter) MYLK Nov 03, 2016 MedGen:C3151077,OMIM:613780 Aortic aneurysm, familial thoracic 7 paternal 3 123649014 GATTACCGGACAGTGACAATCAATACTGAACAAAAAGTATCTGACTTCTACGACATTGAGG 749951964 373252 NM_014319.4(LEMD3):c.1873C>T (p.Arg625Ter) LEMD3 Jan 06, 2017 MedGen:CN517202 not provided germline 12 65238766 AGACCACTGATGTCTTTTTGGTGTCGTTTTCGACGTGCTTTTGTTACTGTAACTCACAGAT 397516353 52558 NM_000363.4(TNNI3):c.470C>T (p.Ala157Val) TNNI3 Nov 08, 2017 MedGen:C1860752,OMIM:613690;Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Familial hypertrophic cardiomyopathy 7;Hypertrophic cardiomyopathy;Primary familial hypertrophic cardiomyopathy;not provided germline 19 55154109 TGAGGATCTCTGCAGATGCCATGATGCAGGCGCTGCTGGGGGCCCGGGCTAAGGAGTCCCT 119472028 19103 NM_014080.4(DUOX2):c.2524C>T (p.Arg842Ter) DUOX2 Oct 01, 2005 MedGen:C1846632,OMIM:607200 Thyroid dyshormonogenesis 6 germline 15 45104176 GACAAGGATGGCAATGGCTACCTGTCCTTCCGAGAGTTCCTGGACATCCTGGTGGTCTTCA 786205162 187943 NM_173354.4(SIK1):c.1897C>T (p.Gln633Ter) SIK1 Apr 02, 2015 MedGen:C4225360,OMIM:616341 Epileptic encephalopathy, early infantile, 30 germline 21 43417622 GGCGGCCTGAGCCCCTTCCACGCCCCTGCACAGAGCCCAGGCCTGCACGGCGGCGCAGCCG 796052641 203766 NM_172107.3(KCNQ2):c.1004C>T (p.Pro335Leu) KCNQ2 Mar 31, 2017 MedGen:CN517202 not provided germline 20 63438644 GGCAGAAGCACTTTGAGAAGAGGCGGAACCCGGCAGCAGGCCTGATCCAGGTGAGTCCAGG 104893944 17436 NM_000045.3(ARG1):c.61C>T (p.Arg21Ter) ARG1 Apr 07, 2017 MedGen:C0268548,OMIM:207800,Orphanet:ORPHA90,SNOMED CT:23501004;MedGen:CN517202 Arginase deficiency;not provided germline 6 131576666 GAAGTACTTTATTTTTTAATTGTTCAGCCACGAGGAGGGGTGGAAGAAGGCCCTACAGTAT 121434352 17039 NM_199242.2(UNC13D):c.766C>T (p.Arg256Ter) UNC13D Nov 14, 2003 MedGen:C1837174,OMIM:608898 Hemophagocytic lymphohistiocytosis, familial, 3 germline 17 75840317 GGCATCCCCGCCTGTCAGGACCTGCGCTGCCGAGAGGACCAGTGGTACCCCCTGGAACCCC 772801089 429066 NM_000124.3(ERCC6):c.2923C>T (p.Arg975Ter) ERCC6 Aug 08, 2016 MedGen:C0751038,OMIM:133540,Orphanet:ORPHA90322 Cockayne syndrome B germline 10 49472377 GCGGGCACCATTGAAGAAAAGATCTACCACCGGTCAGTGCACACAGTGGCCACTCTTGGCT 372615994 59492 NM_002290.4(LAMA4):c.3217C>T (p.Arg1073Ter) LAMA4 Jul 31, 2007 MedGen:C3808935,OMIM:615235 Dilated cardiomyopathy 1JJ germline 6 112139164 GGTCAGGTGACTCGCTTTGACATAGAAGTTCGAACACCAGCTGACAACGGCCTTATTCTCC 886037732 248885 NM_177438.2(DICER1):c.745C>T (p.G249*) DICER1 Nov 11, 2014 MedGen:CN072455,OMIM:601200 DICER1-related pleuropulmonary blastoma cancer predisposition syndrome somatic 14 95126738 TTTTGTTTCTTATGTTAAAGGTATACTTCTCAGCCATGTGAGATTGTGGTGGATTGTGGAC 200596762 200123 NM_000255.3(MUT):c.682C>T (p.Arg228Ter) MUT Jun 22, 2017 MedGen:CN517202 not provided germline 6 49457762 CAAAATGATATACTAAAGGAATTTATGGTTCGAAATACATACATTTTTCCTCCAGAACCAT 55770810 70063 NM_007294.3(BRCA1):c.5095C>T (p.Arg1699Trp) BRCA1 Mar 07, 2018 MedGen:CN221560;MedGen:C2676676,OMIM:604370;MedGen:CN850168,OMIM:617883;MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C3469521,OMIM:227650;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:C1140680,Orphanet:ORPHA213500;MedGen:CN517202 Breast and colorectal cancer;Breast-ovarian cancer, familial 1;FANCONI ANEMIA, COMPLEMENTATION GROUP S;Familial cancer of breast;Fanconi anemia, complementation group A;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;Ovarian cancer;not provided germline;paternal 17 43063931 CATTCTGCAGATGCTGAGTTTGTGTGTGAACGGACACTGAAATATTTTCTAGGAATTGCGG 122461162 26516 NM_001042537.1(SLC9A6):c.1498C>T (p.Arg500Ter) SLC9A6 Oct 01, 2014 MedGen:C2678194,OMIM:300243,Orphanet:ORPHA85278 Christianson syndrome germline X 136024365 CGTGGTGCAATGGCATTTGCCTTGGCCATTCGAGATACTGCCACTTATGCACGGCAAATGA 63751302 95693 NM_000249.3(MLH1):c.445C>T (p.Gln149Ter) MLH1 Sep 05, 2013 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Lynch syndrome germline 3 37007055 CCTAAACCATGTGCTGGCAATCAAGGGACCCAGATCACGGTAAGAATGGTACATGGGAGAG 267606579 49632 NM_003977.3(AIP):c.811C>T (p.Arg271Trp) AIP Jun 21, 2012 MedGen:C0346302,OMIM:102200,Orphanet:ORPHA96256,SNOMED CT:254957009 Somatotroph adenoma not provided 11 67490811 CCTGCAGACAACGTCAAGGCCTACTTCAAGCGGGGCAAGGCCCACGCGGCCGTGTGGAATG 886041525 264373 NM_004820.4(CYP7B1):c.793C>T (p.Gln265Ter) CYP7B1 Feb 01, 2016 MedGen:CN517202 not provided germline 8 64615748 GCCAAGATGCAAGGATGGTCAGAAGTTTTTCAAAGCAGGCAAGATGTCCTGGAGAAATATT 78347057 47634 NM_024312.4(GNPTAB):c.136C>T (p.Arg46Ter) GNPTAB May 10, 2012 MedGen:C2673377,OMIM:252500,Orphanet:ORPHA576 I cell disease not provided 12 101796744 TCTTTGTTCTAGGTGGTTCTGGAATGGAGCCGAGATCAATACCATGTTTTGTTTGATTCCT -1 462720 NM_000059.3(BRCA2):c.2677C>T (p.Gln893Ter) BRCA2 Feb 27, 2017 MedGen:C0677776,Orphanet:ORPHA145 Hereditary breast and ovarian cancer syndrome germline 13 32337032 TTCTCAGACAATGAGAATAATTTTGTCTTCCAAGTAGCTAATGAAAGGAATAATCTTGCTT 878853242 237626 NM_000307.4(POU3F4):c.235C>T (p.Gln79Ter) POU3F4 Feb 19, 2016 MedGen:C1844678,OMIM:304400,Orphanet:ORPHA383 Deafness, X-linked 2 germline X 83508559 TCCACACTGGCCACCAGCCCCCTGGACCAGCAGGACGTGAAGCCCGGGCGCGAAGACCTGC 72555359 15963 NM_000404.3(GLB1):c.1369C>T (p.Arg457Ter) GLB1 Sep 01, 1991 MedGen:C0268271,OMIM:230500,Orphanet:ORPHA79255,SNOMED CT:238026007 Infantile GM1 gangliosidosis germline 3 33016819 ACCCCACAGATCCCCCAGGGAGTCCTTGAGCGAAACAATGTGATCACTCTGAACATAACAG 397514700 65568 NM_032208.2(ANTXR1):c.505C>T (p.Arg169Ter) ANTXR1 May 02, 2013 MedGen:C0406723,OMIM:230740,Orphanet:ORPHA2067,SNOMED CT:239028001 Odontotrichomelic syndrome germline 2 69075602 TTTCTTTCCTTTTCCCAGGCTAATAGGTCTCGAGATCTTGGTGCAATTGTTTACTGTGTTG 371525247 214324 NM_025114.3(CEP290):c.5932C>T (p.Arg1978Ter) CEP290 Feb 23, 2015 MedGen:C1857780,OMIM:610188 Joubert syndrome 5 unknown 12 88071373 GGCATGACTGTTGATCAGGTTTTGGGAATACGAGCTTTGGAGTCAGAAAAAGAATTGGAAG 863224069 210585 NM_014874.3(MFN2):c.314C>T (p.Thr105Met) MFN2 Apr 24, 2017 MedGen:CN043576;MedGen:CN517202 Charcot-Marie-Tooth disease, type 2;not provided germline 1 11996158 TTTGCTGACAGCTGTTACTTCCTTCTAGGACGAGCAATGGGAAGAGCACCGTGATCAATGC 142637231 263940 NM_005518.3(HMGCS2):c.862C>T (p.Arg288Ter) HMGCS2 Apr 04, 2016 MedGen:CN517202 not provided germline 1 119757427 TTCACGCTTCCTCTTCCAGCTGGCAGCGATCGACCCTTCACCCTTGACGATTTACAGTACA 863223788 210203 NM_000192.3(TBX5):c.835C>T (p.Arg279Ter) TBX5 Jun 01, 2017 MedGen:C3542024,OMIM:614823;MedGen:CN517202 Aortic valve disease 2;not provided germline 12 114366312 TCCAACCACAGTCCTTTCAGCAGCGAGTCTCGAGCTCTCTCCACCTCATCCAATTTGGGGT 886039562 259774 NM_000094.3(COL7A1):c.58C>T (p.Arg20Ter) COL7A1 Aug 16, 2016 MedGen:CN517202 not provided germline 3 48595102 CTCTGCGCCGGGATCCTGGCAGAGGCGCCCCGAGTGCGAGCCCAGCACAGGGAGAGAGGTG 886041129 265111 NM_000044.4(AR):c.220C>T (p.Gln74Ter) AR Oct 14, 2016 MedGen:C0039585,OMIM:300068,SNOMED CT:12313004;MedGen:CN517202 Androgen resistance syndrome;not provided germline X 67545366 CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAGAGACTAGCC 876658325 232995 NM_000038.5(APC):c.481C>T (p.Gln161Ter) APC May 22, 2017 MedGen:C2713442,OMIM:175100;MedGen:C0027672,SNOMED CT:699346009 Familial adenomatous polyposis 1;Hereditary cancer-predisposing syndrome germline 5 112775687 GAAGAAAAGGAAAAAGACTGGTATTACGCTCAACTTCAGAATCTCACTAAAAGAATAGATA 80338882 34214 NM_003227.3(TFR2):c.1186C>T (p.Arg396Ter) TFR2 Jun 09, 2011 MedGen:C1858664,OMIM:604250,Orphanet:ORPHA225123 Hemochromatosis type 3 not provided 7 100630973 GGCTCCCCTTATCACCTGGGCCCCGGGCCACGACTGCGGCTAGTGGTCAACAATCACAGGA 794729286 199018 NM_001256850.1(TTN):c.70327C>T (p.Arg23443Ter) TTN Mar 27, 2013 MedGen:CN517202 not provided germline 2 178570882 GATCACAGATATGAGTTCCGGGTTATAGCCCGAAATGCCGCAGGAGTGTTTAGTGAGCCTT 771610752 444773 NM_199292.2(TH):c.457C>T (p.Arg153Ter) TH Jun 26, 2017 MedGen:CN517202 not provided germline 11 2168614 CATCTAGAGACCCGGCCCGCCCAGAGGCCGCGAGCTGGGGGCCCCCACCTGGAGTACTTCG -1 474571 NM_000535.6(PMS2):c.1606C>T (p.Gln536Ter) PMS2 Oct 17, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 7 5987159 GACAGGGGCTCGCAGGAACATGTGGACTCTCAGGAGAAAGCGCCTAAAACTGACGACTCTT 121909391 16348 NM_001174089.1(SLC4A11):c.2557C>T (p.Arg853Cys) SLC4A11 Mar 01, 2008 MedGen:C0544008 Corneal endothelial dystrophy germline 20 3228260 CCCCTCATCATGATCGCCATGATCCCCATCCGGTACAGGCGGGTGGGCAGTGGGCAGGAGG 1057520339 368565 NM_022455.4(NSD1):c.2362C>T (p.Arg788Ter) NSD1 Dec 22, 2016 MedGen:C0004903,OMIM:130650,Orphanet:ORPHA116,SNOMED CT:81780002;MedGen:CN517202 Beckwith-Wiedemann syndrome;not provided germline 5 177210761 TTACATTCGAAAAGCAAACAGCCCAAGTTCCGAAGTATAAAGTGCAAACACAAAGAAAATC 104894132 16034 NM_000380.3(XPA):c.682C>T (p.Arg228Ter) XPA Sep 26, 2016 MedGen:C0268135,OMIM:278700 Xeroderma pigmentosum, type 1 germline 9 97675579 GACTTTAAAATTTTTTTTTCAGAATTGCGGCGAGCAGTAAGAAGCAGCGTGTGGAAAAGGG 1057519502 362231 NM_000138.4(FBN1):c.2563C>T (p.Gln855Ter) FBN1 Jul 05, 2016 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006 Marfan syndrome de novo 15 48495237 TCTGCAGAAACCATCAAGGGCACTTGCTGGCAGACTGTCATTGATGGGCGATGTGAGATCA 137852261 25654 NM_000133.3(F9):c.1150C>T (p.Arg384Ter) F9 Jul 01, 1989 MedGen:C0008533,OMIM:306900,Orphanet:ORPHA98879,SNOMED CT:41788008 Hereditary factor IX deficiency disease germline X 139561835 GTTCCACTTGTTGACCGAGCCACATGTCTTCGATCTACAAAGTTCACCATCTATAACAACA 1064793742 411311 NM_004006.2(DMD):c.10651C>T (p.Gln3551Ter) DMD Jun 10, 2015 MedGen:CN517202 not provided germline X 31147421 TCCCCTCCTGAAATGATGCCCACCTCTCCCCAGAGTCCCCGGGATGCTGAGCTCATTGCTG 777758903 216039 NM_000255.3(MUT):c.2080C>T (p.Arg694Trp) MUT Mar 19, 2017 Human Phenotype Ontology:HP:0002912,MedGen:C0268583,SNOMED CT:42393006;MedGen:C1855114,OMIM:251000 Methylmalonic acidemia;Methylmalonic aciduria due to methylmalonyl-CoA mutase deficiency germline 6 49435500 GAACTCATCAAAGAACTTAACTCCCTTGGACGGCCAGATATTCTTGTCATGTGTGGAGGGG 546603773 362590 NM_033068.2(ACP4):c.428C>T (p.Thr143Met) ACP4 Oct 28, 2016 MedGen:C4310630,OMIM:617297 Amelogenesis imperfecta, type IJ germline 19 50791780 AGGCCCGCTGGAGGCCGATCCCGGTGCACACGGTGCCCGTGGCTGAGGATAAGGTCAGGGG 750614500 203845 NM_000026.3(ADSL):c.568C>T (p.Arg190Ter) ADSL Jan 10, 2015 MedGen:CN517202 not provided germline 22 40358949 TGCATGGATCTCCAGAACTTGAAGCGTGTCCGAGATGACCTGCGCTTCCGGGGAGTAAAGG 796052676 202181 NM_004519.3(KCNQ3):c.688C>T (p.Arg230Cys) KCNQ3 Jun 08, 2017 MedGen:C1852581,OMIM:121201;MedGen:CN517202 Benign familial neonatal seizures 2;not provided de novo;germline;unknown 8 132180246 AATGTTCTGGCCACCTCCCTGCGAAGCCTGCGCTTCCTGCAGATCCTGCGCATGCTGCGGA 185741664 200047 NM_020166.4(MCCC1):c.841C>T (p.Arg281Ter) MCCC1 Nov 28, 2016 MedGen:CN028786,OMIM:210200 3 Methylcrotonyl-CoA carboxylase 1 deficiency germline 3 183057343 TTGTTTGAAAGAGACTGTAGTGTGCAGAGGCGACATCAGAAGATCATTGAGGAGGCCCCAG 111033627 25944 NM_002351.4(SH2D1A):c.203C>T (p.Thr68Ile) SH2D1A Oct 01, 1998 MedGen:C1868674,OMIM:308240 Lymphoproliferative syndrome 1, X-linked germline X 124370177 AATAATTTGCTTGGCCTTTTATTTTCCAGACAGCACCTGGGGTACATAAAAGATATTTCCG 59151464 77545 NM_006121.3(KRT1):c.559C>T (p.Leu187Phe) KRT1 Mar 10, 2016 MedGen:CN517202 not provided germline 12 52679790 AAGTCTCGAGAAAGGGAGCAAATCAAGTCACTCAACAACCAATTTGCCTCCTTCATTGACA 121908563 20928 NM_006502.2(POLH):c.376C>T (p.Gln126Ter) POLH Jul 09, 1999 MedGen:C1848410,OMIM:278750,Orphanet:ORPHA90342 Xeroderma pigmentosum, variant type germline 6 43587375 GAGGCTTACGTAGATCTGACCAGTGCTGTACAAGAGAGACTACAAAAGCTACAAGGTCAGC 786204845 187229 NM_014822.3(SEC24D):c.613C>T (p.Gln205Ter) SEC24D Mar 05, 2015 MedGen:C4225382,OMIM:616294 Cole-Carpenter syndrome 2 germline 4 118815511 GGGCTCTCTGGGCCTCCTCCTCCAAATGCCCAGTACCAGCCCCCACCTCTTCCAGGCCAGA 121908374 20176 NM_020533.2(MCOLN1):c.1207C>T (p.Arg403Cys) MCOLN1 Jul 30, 2015 MedGen:C0238286,OMIM:252650,Orphanet:ORPHA578,SNOMED CT:111384001 Mucolipidosis type IV germline 19 7529173 TCGACGCTGCTGGTGTGGGTGGGCGTGATCCGCTACCTGACCTTCTTCCACAACTACAATG 199422260 47898 NR_001566.1(TERC):n.35C>T TERC May 10, 2012 MedGen:C1851970,OMIM:127550 Dyskeratosis congenita autosomal dominant not provided 3 169765026 TGCGGAGGGTGGGCCTGGGAGGGGTGGTGGCCATTTTTTGTCTAACCCTAACTGAGAAGGG 63750302 96033 NM_000251.2(MSH2):c.1183C>T (p.Gln395Ter) MSH2 Sep 05, 2013 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Lynch syndrome germline 2 47429848 CCAGATCTTAACCGACTTGCCAAGAAGTTTCAAAGACAAGCAGCAAACTTACAAGATTGTT 267608647 153522 NM_003159.2(CDKL5):c.1954C>T (p.Gln652Ter) CDKL5 Feb 08, 2013 MedGen:C1839333,OMIM:300672;MedGen:CN517202 Early infantile epileptic encephalopathy 2;not provided germline;unknown X 18608820 CCTTTTAAATTTTACTTCCAGCCTGGAGAACAGCTCCCTCCAGAGATGACTGTGGCAAGAT 78464826 408421 NM_032193.3(RNASEH2C):c.451C>T (p.Pro151Ser) RNASEH2C Jul 31, 2015 MedGen:CN517202 not provided germline 11 65720062 GATGCCAAAGTGCGTGGGGCCTTAACTTGGCCCAGCCTTGCGGCAGCGGTGAGTAGACGAG 138130157 20323 NM_017431.2(PRKAG3):c.673C>T (p.Arg225Trp) PRKAG3 Sep 19, 2007 MedGen:C3887972 Glycogen content in skeletal muscle, increased germline 2 218828561 GCCTTCTTTGCTCTGGTGGCCAACGGTGTGCGGGCAGCCCCTCTATGGGACAGCAAGAAGC 1085307125 413893 NM_030916.2(NECTIN4):c.181C>T (p.Gln61Ter) NECTIN4 Jan 24, 2018 MedGen:C3150807,OMIM:613573,Orphanet:ORPHA247820 Ectodermal dysplasia-syndactyly syndrome 1 germline 1 161079848 CCCTGCTTCTACCGAGGGGACTCCGGCGAGCAAGTGGGGCAAGTGGCATGGGCTCGGGTGG 111033201 52339 NM_000260.3(MYO7A):c.2005C>T (p.Arg669Ter) MYO7A Nov 06, 2017 MedGen:C1838701,OMIM:600060;MeSH:D052245,MedGen:C0271097,Orphanet:ORPHA886;MedGen:C1568247,OMIM:276900,Orphanet:ORPHA231169;MedGen:CN517202 Deafness, autosomal recessive 2;Usher syndrome;Usher syndrome, type 1;not provided germline;unknown 11 77174825 TCAGGAATGATGGAGACCATCCGAATCCGCCGAGCTGGCTACCCCATCCGCTACAGCTTCG 121907985 18923 NM_000521.3(HEXB):c.1510C>T (p.Pro504Ser) HEXB Aug 14, 1998 MedGen:CN068767 Sandhoff disease, chronic germline 5 74720644 TGCGGGGGGATGTGTGATTTAAATTTTAGGCCTCGGGCAAGTGCTGTTGGTGAGAGACTCT 587780584 139911 NM_130838.1(UBE3A):c.1373C>T (p.Pro458Leu) UBE3A Feb 14, 2014 MedGen:C0162635,OMIM:105830,Orphanet:ORPHA72,SNOMED CT:76880004 Angelman syndrome de novo 15 25370741 CAGAGAACAAATTCTCTTTTATGACATGTCCCTTTATATTGAATGCTGTCACAAAGAATTT -1 482078 NM_001145358.1(SIN3A):c.1675C>T (p.Arg559Ter) SIN3A Dec 27, 2017 MedGen:CN517202 not provided germline 15 75400792 GCTTCTTGTAAACGATTGGGCTCCAGCTATCGAGCCTTACCAAAGAGTTACCAGCAGCCCA 750349088 260239 NM_000219.5(KCNE1):c.262C>T (p.Gln88Ter) KCNE1 Jun 12, 2015 MedGen:CN517202 not provided germline 21 34449373 TTCAACGTCTACATCGAGTCCGATGCCTGGCAAGAGAAGGACAAGGCCTATGTCCAGGCCC 398123702 100041 NM_003482.3(KMT2D):c.10834C>T (p.Gln3612Ter) KMT2D Aug 06, 2013 MedGen:CN030661,OMIM:147920 Kabuki syndrome 1 germline 12 49033871 CAACAGCAGCAGCAGCAGCAACAACAGCAACAGCACTCAGCTGTGCTGGCTCTCAGCCCTT 781036625 420285 NM_001080397.2(SLC45A1):c.628C>T (p.Arg210Trp) SLC45A1 Jun 26, 2017 MedGen:CN277733,OMIM:617532 INTELLECTUAL DEVELOPMENTAL DISORDER WITH NEUROPSYCHIATRIC FEATURES germline 1 8325853 CTGCTGGGCCTCTCGCTCTTGCTGAATGGCCGGGACATTGGCATCGCCCTGGCTGACGTGA 80338881 34231 NM_003227.3(TFR2):c.949C>T (p.Gln317Ter) TFR2 Jun 09, 2011 MedGen:C1858664,OMIM:604250,Orphanet:ORPHA225123 Hemochromatosis type 3 not provided 7 100632099 GACCCACCCAAGCCAAGCCTGTCCAGCCAGCAGGCAGTGTATGGACATGTGAGTCTGGGGA 773157352 264818 NM_021728.3(OTX2):c.226C>T (p.Arg76Ter) OTX2 Apr 12, 2016 MedGen:CN517202 not provided germline 14 56804235 GCCAAGACCCGGTACCCAGACATCTTCATGCGAGAGGAGGTGGCACTGAAAATCAACTTGC 72555393 15974 NM_000404.3(GLB1):c.245C>T (p.Thr82Met) GLB1 Mar 12, 2013 MedGen:C0268273,OMIM:230650,Orphanet:ORPHA79257;MedGen:C0268271,OMIM:230500,Orphanet:ORPHA79255,SNOMED CT:238026007 Gangliosidosis GM1 type 3;Infantile GM1 gangliosidosis germline 3 33072544 TGAAGATGGCTGGGCTGAACGCCATCCAGACGTAAGTAGGAGGGCATGTGGCTCTCACCTA 104894111 22027 NM_004473.3(FOXE1):c.304C>T (p.Arg102Cys) FOXE1 Mar 01, 2011 MedGen:C1968699 Hypothyroidism, thyroidal, with spiky hair and cleft palate germline 9 97854218 GACAACCCCAAAAAGTGGCAGAACAGCATCCGCCACAACCTCACACTCAACGACTGCTTCC 886044411 274521 NM_001130987.1(DYSF):c.4462C>T (p.Gln1488Ter) DYSF Aug 11, 2016 MedGen:C1850889,OMIM:253601,Orphanet:ORPHA268 Limb-girdle muscular dystrophy, type 2B germline 2 71613408 ATTGATGACAAGGAGCCCCTCATCCCCATCCAGGTAGGATGGGCATCCTCCAGGGAGGCCT 72648250 225057 NM_001256850.1(TTN):c.88243C>T (p.Arg29415Ter) TTN Jan 23, 2018 EFO:EFO_0000407,Human Phenotype Ontology:HP:0001644,MedGen:C0007193,Orphanet:ORPHA217604,SNOMED CT:195021004;MedGen:CN517202 Primary dilated cardiomyopathy;not provided germline 2 178548460 GCCCGAATCCATCATTATGTGGTAGAGAAACGAGAGGCAAGTCGCCGTAGTTGGCAGGTTA 121917713 28865 NM_000168.5(GLI3):c.868C>T (p.Arg290Ter) GLI3 Jul 03, 2016 MedGen:C0265306,OMIM:175700,SNOMED CT:32985001;MedGen:C0265306,OMIM:175700,SNOMED CT:32985001;MedGen:C0265220,OMIM:146510,Orphanet:ORPHA672,SNOMED CT:56677004;MedGen:C1868111,OMIM:174700,Orphanet:ORPHA93338 Greig cephalopolysyndactyly syndrome;Greig cephalopolysyndactyly syndrome;Pallister-Hall syndrome;Preaxial polydactyly 4 germline 7 42040198 TCCAGCCCCAGGCTGTCAGCCAGGCCGAGCCGAAAACGTACACTGTCCATATCACCACTCT 587782069 151579 NM_144997.6(FLCN):c.499C>T (p.Gln167Ter) FLCN Feb 27, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0346010,OMIM:135150,Orphanet:ORPHA122,SNOMED CT:110985001;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Multiple fibrofolliculomas;not provided germline 17 17224041 TTCATCAAGGACAGCCTGGCCAGGGGCTTCCAGCGCTGGTACAGCATCATCACCATCATGA 387906502 26721 NM_000307.4(POU3F4):c.935C>T (p.Ala312Val) POU3F4 Aug 01, 1995 MedGen:C1844678,OMIM:304400,Orphanet:ORPHA383 Deafness, X-linked 2 germline X 83509259 AGCCTGCCGCGCAGGAGATCTCCTCGCTGGCAGACAGCCTCCAGTTGGAGAAGGAAGTGGT 121913081 31545 NM_000043.5(FAS):c.809C>T (p.Thr270Ile) FAS Feb 01, 1999 MedGen:C1866119 Autoimmune lymphoproliferative syndrome, type 1a germline 10 89014251 ATGAGATCAAGAATGACAATGTCCAAGACACAGCAGAACAGAAAGTTCAACTGCTTCGTAA 137852288 25570 NM_000292.2(PHKA2):c.3614C>T (p.Pro1205Leu) PHKA2 Feb 01, 1995 MedGen:C0017927,OMIM:306000 Glycogen storage disease type IXa1 germline X 18893579 GAATCTGCCACTTCTTTTATGACAGCGCTCCGAGTGGGGCTTATGGGACGATGACCTACCT 121908432 20612 NM_014112.4(TRPS1):c.2557C>T (p.Arg853Ter) TRPS1 Jan 24, 2017 MedGen:C0432233,OMIM:190350,SNOMED CT:254091006 Trichorhinophalangeal dysplasia type I germline 8 115587144 AGTCCCAATGTGGAGGCCGCCCATCTGGCGCGACCTATTTATGGCTTGGCTGTGGAAACCA 376993881 407916 NM_000429.2(MAT1A):c.895C>T (p.Arg299Cys) MAT1A Jun 03, 2016 MedGen:CN517202 not provided germline 10 80275073 AAGGTAGACCGCTCAGCTGCATATGCTGCCCGCTGGGTGGCCAAGTCTCTGGTGAAAGCAG 886039337 260316 NM_000397.3(CYBB):c.868C>T (p.Arg290Ter) CYBB Oct 31, 2016 MedGen:CN517202 not provided germline X 37801319 TATCTCTGTGAGAGGTTGGTGCGGTTTTGGCGATCTCAACAGAAGGTGGTCATCACCAAGG 80358515 65966 NM_000059.3(BRCA2):c.250C>T (p.Gln84Ter) BRCA2 Aug 03, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline;somatic 13 32319259 CTGGCTTCAACTCCAATAATATTCAAAGAGCAAGGGCTGACTCTGCCGCTGTACCAATCTC 387906698 38878 NM_002769.4(PRSS1):c.346C>T (p.Arg116Cys) PRSS1 Mar 01, 2012 MedGen:C0238339,OMIM:167800,Orphanet:ORPHA676,SNOMED CT:68072000 Hereditary pancreatitis germline 7 142751919 AATGACATCATGTTAATCAAGCTCTCCTCACGTGCAGTAATCAACGCCCGCGTGTCCACCA 587781236 165793 NM_130838.1(UBE3A):c.1967C>T (p.Thr656Ile) UBE3A Feb 14, 2014 MedGen:C0162635,OMIM:105830,Orphanet:ORPHA72,SNOMED CT:76880004 Angelman syndrome de novo 15 25355989 AAGGGAATGTGGAAGATGACATGATGATCACTTTCCAGATATCACAGACAGATCTTTTTGG 121908729 17019 NM_000022.3(ADA):c.698C>T (p.Thr233Ile) ADA Jul 01, 1997 MedGen:C1863239;MedGen:C1863236,OMIM:102700,Orphanet:ORPHA277 Partial adenosine deaminase deficiency;Severe combined immunodeficiency due to ADA deficiency germline;unknown 20 44622911 CTTCTCTACAGGCTGTGGACATACTCAAGACAGAGCGGCTGGGACACGGCTACCACACCCT 397517983 57570 NM_206933.2(USH2A):c.12868C>T (p.Gln4290Ter) USH2A Dec 23, 2011 MedGen:C1848634,OMIM:276901 Usher syndrome, type 2A germline 1 215675043 AAACTGCTGATTTCCTGGATCCCACCAGAACAGTCTAATGGTATTATCCAGTCCTATAGGC 587779409 106597 NM_001909.4(CTSD):c.470C>T (p.Ser157Leu) CTSD - MedGen:C1864669,OMIM:610127,Orphanet:ORPHA228337 Ceroid lipofuscinosis neuronal 10 inherited 11 1758970 TCTCCGGGTACCTGAGCCAGGACACTGTGTCGGTGAGTCCCTCTGGGGCCTTTCCCAGGAC 369176613 150302 NM_000406.2(GNRHR):c.806C>T (p.Thr269Met) GNRHR Jul 08, 2015 Human Phenotype Ontology:HP:0000044,MedGen:C0271623,OMIM:146110,Orphanet:ORPHA181387,SNOMED CT:33927004;Human Phenotype Ontology:HP:0000044,MedGen:C0271623,OMIM:146110,Orphanet:ORPHA181387,SNOMED CT:33927004 Hypogonadotropic hypogonadism 7 with or without anosmia;Hypogonadotropic hypogonadism 7 with or without anosmia germline;inherited 4 67740661 CAAGAGCACGGCTGAAGACTCTAAAAATGACGGTTGCATTTGCCACTTCATTTACTGTCTG 151340626 26841 NM_000084.4(CLCN5):c.731C>T (p.Ser244Leu) CLCN5 Oct 15, 2015 MedGen:C1848336,OMIM:300009;MedGen:C1845168,OMIM:300554;MedGen:CN517202 Dent disease 1;Hypophosphatemic rickets, X-linked recessive;not provided germline X 50085987 TAATTCTGAGTTTTGGATTTTAGGTCTTGTCGGCTGCAGCAGCAGCTGGTGTATCTGTAGC 148434485 357085 NM_005373.2(MPL):c.127C>T (p.Arg43Ter) MPL Oct 31, 2016 MedGen:C1327915,OMIM:604498,Orphanet:ORPHA3319 Congenital amegakaryocytic thrombocytopenia unknown 1 43338146 TCAGACTCAGAGCCCCTGAAGTGTTTCTCCCGAACATTTGAGGACCTCACTTGCTTCTGGG 879254996 246293 NM_000527.4(LDLR):c.1706-1G>A LDLR Mar 25, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11116858 GTGACCTCTCCTTATCCACTTGTGTGTCTAGATCTCCTCAGTGGCCGCCTCTACTGGGTTG 121434291 18581 NM_130849.3(SLC39A4):c.989G>A (p.Gly330Asp) SLC39A4 Jul 01, 2002 MedGen:C0221036,OMIM:201100,Orphanet:ORPHA37,SNOMED CT:37702000 Hereditary acrodermatitis enteropathica germline 8 144414422 CGCCTCACCCGCCCCCAGGGTATCTGTACGGCTCCCTGGCCACGCTGCTCATCTGCCTCTG 397507762 66454 NM_000059.3(BRCA2):c.516+1G>A BRCA2 May 09, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline 13 32326283 AGTTTGTTTCATACACCAAAGTTTGTGAAGGTAAATATTCTACCTGGTTTATTTTTATGAC 111033754 36581 NM_000155.3(GALT):c.692G>A (p.Arg231His) GALT Dec 04, 2012 MedGen:C0268151,OMIM:230400,Orphanet:ORPHA79239,SNOMED CT:124354006 Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase not provided 9 34648766 ACTTCCTATCCATTCTGTCTTCCTAGGAACGTCTGGTCCTAACCAGTGAGCACTGGTTAGT 121918742 79529 NM_006920.4(SCN1A):c.4724G>A (p.Gly1575Glu) SCN1A Dec 20, 2014 MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002 Severe myoclonic epilepsy in infancy de novo;germline 2 165994241 TCAATCTGGTGTTCATTGTGCTATTTACTGGAGAGTGTGTACTGAAACTCATCTCTCTACG 267607039 16073 NM_015559.2(SETBP1):c.2609G>A (p.Gly870Asp) SETBP1 Jun 01, 2010 MedGen:C1849294,OMIM:269150,SNOMED CT:18899000 Schinzel-Giedion syndrome germline 18 44951949 ACAGTGAGGAGACGATCCCCAGCGACAGCGGCATTGGGACAGACAACAACAGCACTTCTGA 797044925 205260 NM_007327.3(GRIN1):c.2443G>A (p.Gly815Arg) GRIN1 Dec 27, 2013 MeSH:D030342,MedGen:C0950123 Inborn genetic diseases germline 9 137163668 CCTGCGACCCTTACTTTTGAGAACATGGCCGGTGCGTTCTCCTTCATCCATTCTCGGGTGG -1 427722 NM_001100.3(ACTA1):c.809G>A (p.Gly270Asp) ACTA1 Aug 24, 2015 MedGen:CN187050 Nemaline myopathy 3, autosomal dominant or recessive germline 1 229431902 TCTGCTCACGCTCCCCGCCGCGGTCCCCAGGTATGGAGTCGGCGGGCATTCACGAGACCAC 72556272 103110 NM_000531.5(OTC):c.485G>A (p.Gly162Glu) OTC - MedGen:CN517202 not provided unknown X 38401373 CTAAAGAAGCATCCATCCCAATTATCAATGGGCTGTCAGATTTGTACCATCCTATCCAGAT 45501492 59237 NM_000548.4(TSC2):c.3397+5G>A TSC2 Jan 16, 2015 MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000;MedGen:CN517202 Tuberous sclerosis syndrome;not provided germline 16 2079674 CCGGGATCGGGTCCGTTCCATGTCGGGTGAGCCTTGGCCCCAGCCACCTCCACACAGGCAC 80338788 20951 NM_000334.4(SCN4A):c.2015G>A (p.Arg672His) SCN4A Apr 28, 2009 MedGen:CN074266,OMIM:170500;MedGen:C3714580,OMIM:170400;MedGen:C2750061,OMIM:613345 Hyperkalemic Periodic Paralysis Type 1;Hypokalemic periodic paralysis 1;Hypokalemic periodic paralysis, type 2 germline 17 63959269 TACAGGGACTGTCTGTGCTACGCTCCTTCCGTCTGGTACACAAAAGCCCCAGGGCCAGGGG 1060503016 404323 NM_003073.4(SMARCB1):c.152G>A (p.Trp51Ter) SMARCB1 Nov 02, 2016 MedGen:C1836327,OMIM:609322;MedGen:C1335929,Orphanet:ORPHA93921,SNOMED CT:142071000119101 Rhabdoid tumor predisposition syndrome 1;Schwannomatosis germline 22 23791814 GTTCTCTGTACAAGAGATACCCCTCACTCTGGAGGCGACTAGCCACTGTGGAAGAGAGGAA 104886429 35625 NM_000495.4(COL4A5):c.546+1G>A COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108573655 CCAGGATATCCAGGTCCTCCTGGAATACAAGTAAGTATCCAGTGATTTTCTTTTTTTGCTA 587783984 168455 NM_133433.3(NIPBL):c.5808+1G>A NIPBL Feb 08, 2013 MedGen:CN029798,OMIM:122470 Cornelia de Lange syndrome 1 germline 5 37026328 ACAAGGAAAATTTTAAACATTACCGATGTGGTAAGAAGGACTGGAACAAGGGTGTGGTCAC 587777793 166221 NM_006218.3(PIK3CA):c.1066G>A (p.Val356Ile) PIK3CA Jan 10, 2013 MedGen:C3554518,OMIM:615108 Cowden syndrome 5 germline 3 179204509 TATATACCTACTTTTTTCTTTTAGATCTATGTTCGAACAGGTATCTACCATGGAGGAGAAC 104894532 22759 NM_000303.2(PMM2):c.26G>A (p.Cys9Tyr) PMM2 Aug 27, 2014 MedGen:C0349653,OMIM:212065,Orphanet:ORPHA79318,SNOMED CT:277893002 Carbohydrate-deficient glycoprotein syndrome type I germline;unknown 16 8797908 GGGACATGGCAGCGCCTGGCCCAGCGCTCTGCCTCTTCGACGTGGATGGGACCCTCACCGC 587779695 107202 NM_000090.3(COL3A1):c.2131G>A (p.Gly711Ser) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188999479 TTATTTCTCACTTATTTTCAGGGTGCTGCTGGTCCTCCTGGGCCACCTGGTGCTGCTGGTA 748442113 428464 NM_002538.3(OCLN):c.1037+1G>A OCLN Jan 31, 2017 MedGen:C3489725,OMIM:251290 Band-like calcification with simplified gyration and polymicrogyria germline 5 69534840 TTATCCAGAGTCTTCCTATAAATCCACGCCGTAAGTAGCATCTCTCTTAGTTTGATAGACT 35324967 30107 NM_000519.3(HBD):c.*199G>A HBD Jan 15, 1992 MedGen:C0271990,SNOMED CT:16427007 delta Thalassemia germline 11 5232765 TGTAAGAAGGTTCCTGAGGCTCTACAGATAGGGAGCACTTGTTTATTTTACAAAGAGTACA 193922503 44492 NM_000492.3(CFTR):c.1585-8G>A CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline 7 117587731 CTAAAAGTGACTCTCTAATTTTCTATTTTTGGTAATAGGACATCTCCAAGTTTGCAGAGAA 886041357 264996 NM_000444.5(PHEX):c.1158G>A (p.Trp386Ter) PHEX Sep 27, 2016 MedGen:CN517202 not provided germline X 22111545 AAACCTTAGCAGGCGCTTTCAGTATAGATGGCTGGAATTCTCAAGGGTAAGTTTAAGAAGA 779218846 236884 NM_018946.3(NANS):c.448+1G>A NANS Jun 20, 2017 MedGen:C1864872,OMIM:610442,Orphanet:ORPHA168454 Spondyloepimetaphyseal dysplasia Genevieve type germline 9 98077018 TTCCTTATCTGGAAAAGACAGCCAAAAAAGGTAAGTGTCTAATTTTTGACTTAAAATCGAA -1 481853 NM_024757.4(EHMT1):c.3259-1G>A EHMT1 Jan 09, 2018 MedGen:CN517202 not provided germline 9 137815946 TGCTGGGCCCTTGCTGCTCATCTGTCCACAGGATGGCCGGCTCCTGCCAGAGTTCAACATG 75037667 131934 NM_006397.2(RNASEH2A):c.872G>A (p.Arg291His) RNASEH2A Mar 13, 2014 MedGen:C1835912,OMIM:610333 Aicardi Goutieres syndrome 4 germline 19 12813438 CCCGTTCTTCCCACCGATATTTCCTGGAACGCGGCCTGGAGTCAGCAACCAGCCTCTAGCA 794728710 196518 NM_001035.2(RYR2):c.689G>A (p.Gly230Asp) RYR2 Oct 11, 2013 MedGen:CN517202 not provided germline 1 237388099 GATTTTTTATCCTTACAGGGTATCTCATTGGTGGTGATGTCCTCAGGTTGCTGCATGGACA 77503355 28955 NM_020630.4(RET):c.1859G>A (p.Cys620Tyr) RET Jul 21, 2016 na;Human Phenotype Ontology:HP:0002865,MeSH:C536914,MedGen:C0238462,Orphanet:ORPHA1332,SNOMED CT:255032005;MeSH:D018761,MedGen:C0025267,OMIM:131100,Orphanet:ORPHA652,SNOMED CT:30664006;MeSH:D018813,MedGen:C0025268,OMIM:171400,Orphanet:ORPHA247698,SNOMED CT:61808009;MeSH:D018814,MedGen:C0025269,OMIM:162300,Orphanet:ORPHA247709,SNOMED CT:6153000,SNOMED CT:61530001;MedGen:C1970712,OMIM:610755,Orphanet:ORPHA276152;MedGen:CN517202 MEN2A and FMTC;Medullary thyroid carcinoma;Multiple endocrine neoplasia, type 1;Multiple endocrine neoplasia, type 2a;Multiple endocrine neoplasia, type 2b;Multiple endocrine neoplasia, type 4;not provided germline;somatic 10 43113655 ACTGCTTCCCTGAGGAGGAGAAGTGCTTCTGCGAGCCCGAAGACATCCAGGGTGAGTGGGT 864622490 222073 NM_000051.3(ATM):c.3663G>A (p.Trp1221Ter) ATM Jun 30, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Ataxia-telangiectasia syndrome;Hereditary cancer-predisposing syndrome;not provided germline;unknown 11 108282796 ATCTCATTTAGATTATCTGGTTTTGGAATGGCTAAATCTTCAAGATACTGAATACAACTTA 587783540 169908 NM_178151.2(DCX):c.301G>A (p.Val101Met) DCX Feb 08, 2013 Human Phenotype Ontology:HP:0002282,MedGen:C0008519 Heterotopia germline X 111410098 CTGTCTGACAACATCAACCTGCCTCAGGGAGTGCGTTACATTTACACCATTGATGGATCCA 572237881 192236 NM_000404.3(GLB1):c.203G>A (p.Arg68Gln) GLB1 Feb 19, 2015 MedGen:C0268271,OMIM:230500,Orphanet:ORPHA79255,SNOMED CT:238026007 Infantile GM1 gangliosidosis germline 3 33072586 CCCGTGTGCCCCGCTTCTACTGGAAGGACCGGCTGCTGAAGATGAAGATGGCTGGGCTGAA 121917739 28166 NM_002875.4(RAD51):c.449G>A (p.Arg150Gln) RAD51 Jan 01, 2000 MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006 Familial cancer of breast germline 15 40718818 GTTTTTGTTCTCTATAGCTTCCCATTGACCGGGGTGGAGGTGAAGGAAAGGCCATGTACAT 267606745 32531 NM_000091.4(COL4A3):c.3499G>A (p.Gly1167Arg) COL4A3 Jan 01, 2001 MedGen:C1567743,OMIM:104200,Orphanet:ORPHA88918 Alport syndrome, autosomal dominant germline 2 227295044 CAAGGACGTGATGGAATTCCTGGTCCAGCCGGAGAAAAGGGAGAAACGGGTACAACTTGCT 113993968 22529 NM_002775.4(HTRA1):c.754G>A (p.Ala252Thr) HTRA1 Sep 11, 2014 MedGen:C1838577,OMIM:600142,Orphanet:ORPHA199354 Cerebral autosomal recessive arteriopathy with subcortical infarcts and leukoencephalopathy germline 10 122489603 ATCAAGGATGTGGATGAGAAAGCAGACATCGCACTCATCAAAATTGACCACCAGGTAAGGG 587777293 132052 NM_152305.2(POGLUT1):c.11G>A (p.Trp4Ter) POGLUT1 Jan 02, 2014 MedGen:C3810313,OMIM:615696 Dowling-degos disease 4 germline 3 119469032 CTGCAGTAGGTCTGCCGGCGATGGAGTGGTGGGCTAGCTCGCCGCTTCGGCTCTGGCTGCT 367543048 51273 NM_001100.3(ACTA1):c.16G>A (p.Glu6Lys) ACTA1 Apr 11, 2013 MedGen:C0546264,OMIM:255310,Orphanet:ORPHA2020,SNOMED CT:240084007 Congenital myopathy with fiber type disproportion not provided 1 229433100 CAGAAACTAGACACAATGTGCGACGAAGACGAGACCACCGCCCTCGTGTGCGACAATGGCT 121918586 28098 NM_000324.2(RHAG):c.236G>A (p.Ser79Asn) RHAG Feb 01, 1996 MedGen:C4016364 Rh-null hemolytic anemia, regulator type germline 6 49619284 TGACCTTCCTGAAGAAATATGGCTTCAGCAGTGTGGGTATCAACCTACTCGTTGCTGCTTT 121913237 48247 NM_002524.4(NRAS):c.35G>A (p.Gly12Asp) NRAS May 31, 2016 Human Phenotype Ontology:HP:0004808,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:ORPHA519,SNOMED CT:17788007;MedGen:C0278701;MeSH:D015179,MedGen:CN236642;Human Phenotype Ontology:HP:0010816,MedGen:C0334082,OMIM:162900,Orphanet:ORPHA35125,SNOMED CT:25201003;Human Phenotype Ontology:HP:0012209,MedGen:C0349639,OMIM:607785,Orphanet:ORPHA86834;Human Phenotype Ontology:HP:0002861,MeSH:D008545,MedGen:C0025202,SNOMED CT:2092003;MeSH:C562393,MedGen:C0151779,SNOMED CT:93655004;MedGen:C0153574,Orphanet:ORPHA213569;Human Phenotype Ontology:HP:0006775,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:ORPHA29073,SNOMED CT:109989006,SNOMED CT:55921005;MeSH:D009190,MedGen:C0026986,OMIM:614286;Human Phenotype Ontology:HP:0030358,MeSH:D002289,MedGen:C0007131,SNOMED CT:254637007;MedGen:CN517202 Acute myeloid leukemia;Adenocarcinoma of stomach;Colorectal Neoplasms;Epidermal nevus;Juvenile myelomonocytic leukemia;Malignant melanoma;Malignant melanoma of skin;Malignant neoplasm of body of uterus;Multiple myeloma;Myelodysplastic syndrome;Non-small cell lung cancer;not provided germline;somatic 1 114716126 CTGAGTACAAACTGGTGGTGGTTGGAGCAGGTGGTGTTGGGAAAAGCGCACTGACAATCCA 121908552 20949 NM_000334.4(SCN4A):c.1333G>A (p.Val445Met) SCN4A Apr 21, 2017 MedGen:CN074266,OMIM:170500;MedGen:C0752355,OMIM:608390,Orphanet:ORPHA99734;MedGen:CN517202 Hyperkalemic Periodic Paralysis Type 1;Potassium aggravated myotonia;not provided germline 17 63964587 TCTTTCTACCTCATCAATCTGATCCTGGCCGTGGTGGCCATGGCATATGCCGAGCAGAATG 180177158 200598 NM_000030.2(AGXT):c.1071+1G>A AGXT Nov 27, 2014 MedGen:C0268164,OMIM:259900,Orphanet:ORPHA93598,SNOMED CT:65520001 Primary hyperoxaluria, type I germline 2 240878151 ATGGGTGGCCTTGGGCCCTCCACGGGGAAGGTGAGAGGGAGCGCCTCGAGGGCCTTTTGCA 879255590 226778 NM_001830.3(CLCN4):c.1389+5G>A CLCN4 Mar 22, 2016 MedGen:CN232948 CLCN4-related disorder maternal X 10208595 TTACCATATTTACCTTTGGCATGAAGGTAAGTGAAAGGGAAGGAAGATGGGGTGGGGACCC 1064793663 406148 NM_006218.3(PIK3CA):c.278G>A (p.Arg93Gln) PIK3CA Mar 07, 2017 MedGen:CN517202 not provided germline 3 179199103 TTGATGAAACAAGACGACTTTGTGACCTTCGGCTTTTTCAACCCTTTTTAAAAGTAATTGA 104894798 26522 NM_006579.2(EBP):c.87G>A (p.Trp29Ter) EBP Jul 01, 1999 MedGen:C0282102,OMIM:302960,Orphanet:ORPHA35173 Chondrodysplasia punctata 2 X-linked dominant germline X 48523858 CAACTTTGTACCTAATGACCGCCCCACCTGGCATATACTGGCTGGCCTCTTCTCTGTCACA 113994104 445112 NM_001845.5(COL4A1):c.1493G>A (p.Gly498Asp) COL4A1 Jul 06, 2017 MedGen:CN517202 not provided germline 13 110192257 AAGGTTTCCCAGGGCAGCCAGGGGCCAAGGGCGACAGAGGTTTGCCTGGCAGAGATGGTGT 886042748 268187 NM_001848.2(COL6A1):c.1611+1G>A COL6A1 Oct 14, 2015 MedGen:CN029274,OMIM:158810;MedGen:CN033863,OMIM:254090 Bethlem myopathy 1;Ullrich congenital muscular dystrophy 1 germline 21 45998434 CCGGGCAACAGGGGCGCTCCCGGGATAAACGTGAGTACGCCCCCTCCTCCATCTGGCTGTG 558274487 201748 NM_152778.2(MFSD8):c.599G>A (p.Trp200Ter) MFSD8 Feb 13, 2014 MedGen:CN517202 not provided germline 4 127939952 TTACATTCCTTGGAGAAAAAGGTGTGACATGGGATGTGATTAAACTGCAGATAAACATGTA 199422309 27777 NM_198253.2(TERT):c.219+1G>A TERT May 10, 2012 MedGen:C1800706,OMIM:178500,Orphanet:ORPHA79126,SNOMED CT:28168000;MedGen:C3553617,OMIM:614742 Idiopathic fibrosing alveolitis, chronic form;Pulmonary fibrosis and/or bone marrow failure, telomere-related, 1 germline 5 1294770 CCGCCCCCCGCCGCCCCCTCCTTCCGCCAGGTGGGCCTCCCCGGGGTCGGCGTCCGGCTGG 186044004 136315 NM_000098.2(CPT2):c.1646G>A (p.Gly549Asp) CPT2 May 15, 2014 MedGen:C0342790,Orphanet:ORPHA157,SNOMED CT:238002005 Carnitine palmitoyltransferase II deficiency germline 1 53213264 GACTCTGGTTTTCCATTTTGTTTCTCACAGGCCAGGGCTTTGACCGACACTTGTTTGCTCT 137854620 24442 NM_000335.4(SCN5A):c.4259G>A (p.Trp1420Ter) SCN5A Oct 01, 2006 MedGen:CN029323,OMIM:601144 Brugada syndrome 1 germline 3 38557268 TCTTTTCCTCCCAGGCAACATTTAAAGGCTGGATGGACATTATGTATGCAGCTGTGGACTC 387906723 38935 NM_203473.2(PORCN):c.1094G>A (p.Arg365Gln) PORCN Dec 01, 2009 MedGen:C0016395,OMIM:305600,Orphanet:ORPHA2092 Focal dermal hypoplasia germline X 48516082 CCACCCTAGTCCTCCGGAAGCGCCTGGCTCGGATCCTCAGTGCCTGTGTCTTGTCAAAGCG 121912927 32247 NM_000090.3(COL3A1):c.746G>A (p.Gly249Asp) COL3A1 Mar 09, 2000 MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188990308 ATTAATATTTTTTCATTCATTATTTTTAGGGTATCAAAGGTCCAGCTGGGATACCTGGATT 397508243 67971 NM_000492.3(CFTR):c.164+1G>A CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline 7 117504364 TGCTGACAATCTATCTGAAAAATTGGAAAGGTATGTTCATGTACATTGTTTAGTTGAAGAG 397515507 76426 m.3635G>A MT-ND1 Sep 19, 2013 Human Phenotype Ontology:HP:0001112,MedGen:C0917796,OMIM:535000,Orphanet:ORPHA104,SNOMED CT:58610003 Leber's optic atrophy not provided MT 3635 TAGGCCTCCTATTTATTCTAGCCACCTCTAGCCTAGCCGTTTACTCAATCCTCTGATCAGG 753611141 223282 NM_015160.2(PMPCA):c.1129G>A (p.Ala377Thr) PMPCA Feb 10, 2016 Human Phenotype Ontology:HP:0001488,MedGen:C1865916;Human Phenotype Ontology:HP:0000618,MedGen:C0456909;Human Phenotype Ontology:HP:0004925,MedGen:C1839437;Human Phenotype Ontology:HP:0100275,MedGen:C1854699;Human Phenotype Ontology:HP:0001508,MedGen:C0231246;Human Phenotype Ontology:HP:0002283,MedGen:C0241816;Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569;Human Phenotype Ontology:HP:0002791,MedGen:C3203358;Human Phenotype Ontology:HP:0008947,MedGen:C1860834;Human Phenotype Ontology:HP:0002343,MedGen:C0020258,OMIM:236690,Orphanet:ORPHA314928,SNOMED CT:30753002;Human Phenotype Ontology:HP:0000648,MedGen:C0029124;Human Phenotype Ontology:HP:0007936,MedGen:C2675435;Human Phenotype Ontology:HP:0011344,MedGen:C1854919;MedGen:C1859298,OMIM:213200,Orphanet:ORPHA1170 Bilateral ptosis;Blindness;Chronic lactic acidosis;Diffuse cerebellar atrophy;Failure to thrive;Global brain atrophy;Hypertrophic cardiomyopathy;Hypoventilation;Infantile muscular hypotonia;Normal pressure hydrocephalus;Optic atrophy;Restrictive external ophthalmoplegia;Severe global developmental delay;Spinocerebellar ataxia, autosomal recessive 2 germline 9 136418847 CTTCCTCCCAGGCACCACTGGATGTATAACGCGACCTCCTACCACCACAGCTACGAGGACA 200613617 24691 m.9804G>A MT-CO3 Sep 19, 2013 Human Phenotype Ontology:HP:0001112,MedGen:C0917796,OMIM:535000,Orphanet:ORPHA104,SNOMED CT:58610003 Leber's optic atrophy germline MT 9804 GACGGCATCTACGGCTCAACATTTTTTGTAGCCACAGGCTTCCACGGACTTCACGTCATTA 797046075 207401 NM_178012.4(TUBB2B):c.292G>A (p.Gly98Arg) TUBB2B Feb 07, 2017 MedGen:C2750247,OMIM:610031;MedGen:CN517202 Polymicrogyria, asymmetric;not provided germline 6 3225797 TCTTTCCCTCTGGCAGGCCAGAGTGGAGCCGGGAATAACTGGGCCAAGGGCCACTACACAG 121912871 32402 NM_001844.4(COL2A1):c.1060G>A (p.Gly354Arg) COL2A1 May 03, 1996 Human Phenotype Ontology:HP:0002657,MedGen:C0700635,OMIM:184250,Orphanet:ORPHA93346 Spondylometaphyseal dysplasia germline 12 47989769 CGAGGCAACGATGGTCAGCCAGGCCCCGCAGGGCCTCCGGTAAGTTCATTTCATCCTCAGC 587782607 152354 NM_000314.6(PTEN):c.822G>A (p.Trp274Ter) PTEN Nov 11, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline 10 87960914 TTTTTTTTAGGACAAAATGTTTCACTTTTGGGTAAATACATTCTTCATACCAGGACCAGAG 28933379 15841 NM_000038.5(APC):c.3359G>A (p.Gly1120Glu) APC Jun 01, 1992 Human Phenotype Ontology:HP:0006753,MeSH:D013274,MedGen:C0038356,OMIM:613659,SNOMED CT:126824007 Neoplasm of stomach somatic 5 112838953 CAGAAACAAATCGAGTGGGTTCTAATCATGGAATTAATCAAAATGTAAGCCAGTCTTTGTG 398122369 94456 NM_178012.4(TUBB2B):c.1261G>A (p.Glu421Lys) TUBB2B Dec 04, 2015 MedGen:C2750247,OMIM:610031 Polymicrogyria, asymmetric germline 6 3224828 GCCGAGAGCAACATGAACGACCTGGTGTCCGAGTACCAGCAGTACCAGGACGCCACGGCCG 1131691601 421448 NM_000094.3(COL7A1):c.5035G>A (p.Gly1679Arg) COL7A1 Sep 07, 2015 MedGen:CN517202 not provided germline 3 48580598 GTGGGTGAAAAGGGAGACCAGGGAGATCCTGGAGAGGATGGACGAAATGTGAGTCCCAGCC 281874746 36104 NM_000495.4(COL4A5):c.4702G>A (p.Glu1568Lys) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108694820 TCCTTTTCCTTTACCAGATGTGCAGTATGTGAAGCTCCAGCTGTGGTGATCGCAGTTCACA 587779493 106934 NM_000090.3(COL3A1):c.1979G>A (p.Gly660Asp) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188998675 GGCCTAATCATATAATGCCAATCTCCCAGGGTCCAAAGGGTGATGCCGGTGCACCTGGAGC 28931613 31700 NM_001113755.2(TYMP):c.131G>A (p.Arg44Gln) TYMP Jan 14, 2016 MedGen:C0872218,OMIM:603041,Orphanet:ORPHA298 Mitochondrial DNA depletion syndrome 1 (MNGIE type) germline 22 50529579 AGCAGCTCCCGGAGCTGATCCGCATGAAGCGAGACGGAGGCCGCCTGAGCGAAGCGGACAT 104886145 35799 NM_000495.4(COL4A5):c.1895G>A (p.Gly632Asp) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108598817 CCCCTGGTTTCGGCCCTCCAGGCCCAGTAGGTGAAAAAGGCATACAAGGTGTGGCAGGAAA 879255652 247612 NM_014191.3(SCN8A):c.4447G>A (p.Glu1483Lys) SCN8A Aug 22, 2016 MedGen:C4310728,OMIM:617080 Seizures, benign familial infantile, 5 germline 12 51790425 TACTTCGGAGGTCAGGACATCTTCATGACCGAAGAACAGAAGAAGTACTACAATGCCATGA 267607196 23725 NM_000525.3(KCNJ11):c.844G>A (p.Glu282Lys) KCNJ11 Jan 05, 2015 MedGen:C0027773,OMIM:601820,SNOMED CT:42681006 Islet cell hyperplasia germline 11 17387248 CCCAGCGACCTGCACCACCACCAGGACCTCGAGATCATCGTCATCCTGGAAGGCGTGGTGG 774332349 367265 NM_000094.3(COL7A1):c.7219G>A (p.Gly2407Ser) COL7A1 Apr 29, 2015 MedGen:CN517202 not provided germline 3 48570914 CCCGGTGCTCCTGGTGTTGTTGGGTTCCCGGGTCAGACAGGCCCTCGAGGAGAGATGGGTC 397508063 67539 NM_000059.3(BRCA2):c.9572G>A (p.Trp3191Ter) BRCA2 Oct 18, 2016 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome germline 13 32396968 TGCATATACTGCATGCAAATGATCCCAAGTGGTCCACCCCAACTAAAGACTGTACTTCAGG 1131692055 165724 NM_003990.4(PAX2):c.565G>A (p.Gly189Arg) PAX2 Sep 01, 2014 MedGen:C4014925,OMIM:616002 Focal segmental glomerulosclerosis 7 germline 10 100781314 AATGACCCAGTGGGATCCTACTCCATCAATGGGATCCTGGGGATTCCTCGCTCCAATGGTG 267606909 29167 NM_000257.3(MYH7):c.5296G>A (p.Ala1766Thr) MYH7 Jun 03, 2008 MedGen:C3150690 Left ventricular noncompaction 5 germline 14 23415258 CCTCTCTCCTGCACACAGGCCGCCATGATGGCAGAGGAGCTGAAGAAGGAGCAGGACACCA 797046098 207590 NM_017890.4(VPS13B):c.8990G>A (p.Trp2997Ter) VPS13B May 26, 2015 MedGen:C0265223,OMIM:216550,Orphanet:ORPHA193,SNOMED CT:56604005 Cohen syndrome germline 8 99820043 CCTGGGCCCTGCTTATCAATGAATCCAAATGGGACCTCTGGCTATTTGAAGGAGAGAAAAT 797044542 178787 NM_000081.3(LYST):c.11173G>A (p.Gly3725Arg) LYST Jan 15, 2015 MedGen:C0007965,OMIM:214500,Orphanet:ORPHA167,SNOMED CT:111396008 Chédiak-Higashi syndrome germline 1 235664487 GAGGGAGTATCTATCAATGTAATCGCTGGGGGATTAGAAAATGGAATTGTAAGGTAAGAGG 397509395 65665 NM_014845.5(FIG4):c.311G>A (p.Gly104Asp) FIG4 May 02, 2013 MedGen:C1857663,OMIM:216340,Orphanet:ORPHA3472 Yunis Varon syndrome germline 6 109727130 GTTGCATAGGTTTTGTCAGGTTCTTAGAAGGCTATTATATTGTGTTAATAACTAAAAGGAG 876660548 236504 NM_000546.5(TP53):c.273G>A (p.Trp91Ter) TP53 Dec 05, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0085390,Orphanet:ORPHA524,SNOMED CT:428850001 Hereditary cancer-predisposing syndrome;Li-Fraumeni syndrome germline 17 7676096 ACCGGCGGCCCCTGCACCAGCCCCCTCCTGGCCCCTGTCATCTTCTGTCCCTTCCCAGAAA 104886414 35617 NM_000495.4(COL4A5):c.466-12G>A COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108573562 TAATAACTGTGTCTTAGAACTTCCATTGATGGCTTCTTTTAGGGTGAACCAGGTAGTATAA 1131692190 424294 NM_000527.4(LDLR):c.190+5G>A LDLR Mar 30, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11100350 CTCTGATGAGTCCCAGGAGACGTGCTGTGAGTCCCCTTTGGGCATGATATGCATTTATTTT 386134167 51333 NM_002739.4(PRKCG):c.392G>A (p.Cys131Tyr) PRKCG Apr 18, 2013 MedGen:C1854369,OMIM:605361,Orphanet:ORPHA98763 Spinocerebellar ataxia 14 not provided 19 53889744 TCTACGGGCTTGTGCACCAGGGCATGAAATGCTCCTGTGAGTGACCTGGGCCTTGCCAGGG 80356594 34693 NM_194248.2(OTOF):c.2991+1G>A OTOF Apr 26, 2011 MedGen:C1832828,OMIM:601071 Deafness, autosomal recessive 9 not provided 2 26475913 TTCTTCATCAATCAGAGTCAGTGCACAGAGGTGAGGGCCTGGGAGGAGGGAGTGGCTCTGG 199475602 108462 NM_000277.2(PAH):c.529G>A (p.Val177Met) PAH May 08, 2017 Human Phenotype Ontology:HP:0004923,MedGen:C0751435;MedGen:C0031485,OMIM:261600,Orphanet:ORPHA716,SNOMED CT:154735006;MedGen:CN517202 Hyperphenylalaninemia, non-pku;Phenylketonuria;not provided germline 12 102855313 CTGTATTCTAGTGGGCAGCCCATCCCTCGAGTGGAATACATGGAGGAAGAAAAGAAAACAT 397516836 53813 NM_003000.2(SDHB):c.600G>A (p.Trp200Ter) SDHB Dec 15, 2016 MedGen:C1708353,Orphanet:ORPHA29072;MedGen:C0027672,SNOMED CT:699346009 Hereditary Paraganglioma-Pheochromocytoma Syndromes;Hereditary cancer-predisposing syndrome germline 1 17024015 CTGCTGTAGCACCAGCTGCCCCAGCTACTGGTGGAACGGAGACAAATATCTGGGGCCTGCA 137853258 25929 NM_000284.3(PDHA1):c.863G>A (p.Arg288His) PDHA1 Oct 01, 1999 MedGen:C1839413,OMIM:312170,Orphanet:ORPHA79243 Pyruvate dehydrogenase E1-alpha deficiency germline X 19357683 GGCCCATCCTGATGGAGCTGCAGACTTACCGTTACCACGGACACAGTATGAGTGACCCTGG 371609982 418826 NM_018418.4(SPATA7):c.19G>A (p.Val7Ile) SPATA7 May 09, 2017 MeSH:D057130,MedGen:C0339527,Orphanet:ORPHA65,SNOMED CT:193413001 Leber congenital amaurosis germline 14 88385837 AGAGGACTAAGCATGGATGGCAGCCGGAGAGGTAAAGGGCAGCTGTCAGGGGCTACCGCCG 1131691231 421125 NM_177438.2(DICER1):c.2256+1G>A DICER1 Jun 20, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 14 95111316 ACGAAACGAAGGCAGTGCTACCCAAAAGCAGTTAGTATTGGTTAGAACAGAGTAAAAACCT 267608650 165873 NM_003159.2(CDKL5):c.2047-1G>A CDKL5 Mar 13, 2014 MedGen:C2748910,Orphanet:ORPHA3095;MedGen:CN517202 Atypical Rett syndrome;not provided de novo X 18609464 TTAACTTTTATAAATTTCTTTCCTGCCTCAGGGTGGAGTGTATCATGACCCACACTCTGAT 80356937 70128 NM_007294.3(BRCA1):c.5212G>A (p.Gly1738Arg) BRCA1 Nov 01, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome germline 17 43057117 GGTTTCTTTCAGCATGATTTTGAAGTCAGAGGAGATGTGGTCAATGGAAGAAACCACCAAG 876657696 231248 NM_002294.2(LAMP2):c.294G>A (p.Trp98Ter) LAMP2 Mar 18, 2015 MedGen:C0878677,OMIM:300257,Orphanet:ORPHA34587,SNOMED CT:419097006 Danon disease germline X 120455460 AGCAGTGCAGTTCGGACCTGGCTTTTCCTGGATTGCGAATTTTACCAAGGCAGCATCTACT 587779457 107156 NM_000090.3(COL3A1):c.2607+5G>A (p.Gly852_Pro869del) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189003469 GTGAACGTGGCAGTCCTGGTGGACCTGTAAGTATTGATCCTCTTAACTATTATTGAAAAGC 61748436 22460 NM_000554.5(CRX):c.122G>A (p.Arg41Gln) CRX Apr 30, 2017 MedGen:CN074280,OMIM:120970;MedGen:CN517202 Cone-rod dystrophy 2;not provided germline 19 47836264 CCACCCCAGGCGCCCCCAGGAAGCAGCGGCGGGAGCGCACCACCTTCACCCGGAGCCAACT 121908311 19366 NM_000157.3(GBA):c.1246G>A (p.Gly416Ser) GBA Sep 19, 2013 MedGen:C0017205,Orphanet:ORPHA355;MedGen:C1961835,OMIM:230800,SNOMED CT:62201009;MedGen:C0268251,OMIM:231000,Orphanet:ORPHA77261,SNOMED CT:5963005 Gaucher disease;Gaucher's disease, type 1;Subacute neuronopathic Gaucher's disease germline 1 155235823 TTACCCTAGAACCTCCTGTACCATGTGGTCGGCTGGACCGACTGGAACCTTGCCCTGAACC 879255273 246855 NM_198239.1(WISP3):c.643+1G>A WISP3 - MedGen:C0432215,OMIM:208230,Orphanet:ORPHA1159,SNOMED CT:254065005 Progressive pseudorheumatoid dysplasia inherited 6 112064998 AGCTTTCAACAAGCTACAAAACAATGCCAGGTGCTCAGAAGTAGAGCTATTTTTCACGTAT 1057524864 367060 NM_080916.2(DGUOK):c.443+1G>A DGUOK Feb 01, 2017 MedGen:CN517202 not provided germline 2 73946907 GATCTTTGAGAGGTCTGTGTACAGTGACAGGTAAAATGCCAAGCCCTCCACCAGTCACAAG -1 481647 NM_004369.3(COL6A3):c.6156+1G>A COL6A3 Jan 04, 2018 MedGen:CN517202 not provided germline 2 237361738 CGCGGGCCCATCGGCAGCATCGGGCCAAAGGTACGGTGGCTTTACCCTTGCCCACGCCTGA 121909272 23343 NM_000156.5(GAMT):c.506G>A (p.Cys169Tyr) GAMT Mar 01, 2005 MedGen:C0574080,OMIM:612736,Orphanet:ORPHA382,SNOMED CT:124239003 Deficiency of guanidinoacetate methyltransferase germline 19 1398980 TGCTGAAGCCGGGGGGCGTCCTCACCTACTGCAACCTCACCTCCTGGGGGGAGCTGATGAA 1131691159 421080 NM_000051.3(ATM):c.5177+1G>A ATM Apr 13, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0027672,SNOMED CT:699346009 Ataxia-telangiectasia syndrome;Hereditary cancer-predisposing syndrome germline 11 108299886 CTACCTGAATAACACACTGGTAGAAGATTGGTGAGTATTTATTGATACCTTATATGTAATC 886040335 261962 NM_007294.3(BRCA1):c.963G>A (p.Trp321Ter) BRCA1 Oct 18, 2016 MedGen:C2676676,OMIM:604370 Breast-ovarian cancer, familial 1 germline 17 43094568 TGGCTTAGCAAGGAGCCAACATAACAGATGGGCTGGAAGTAAGGAAACATGTAATGATAGG 104893640 22584 NM_002381.4(MATN3):c.209G>A (p.Arg70His) MATN3 Jul 25, 2013 MedGen:CN043640;MedGen:C1846843,OMIM:607078,Orphanet:ORPHA93311 Multiple Epiphyseal Dysplasia, Dominant;Multiple epiphyseal dysplasia 5 germline 2 20012423 CGCCCGCTTCCGGGACCAGCGAGCCTGGCCGCGCCCGCGGTGCAGGTACAGGCGGGCGGCG 367585605 185770 NM_005957.4(MTHFR):c.1320G>A (p.Ser440=) MTHFR - MedGen:C1856058,OMIM:236250 Homocysteinemia due to MTHFR deficiency germline 1 11794385 TGTCTTTGAAGTCTTCGTTCTTTACCTCTCGGGAGAACCAAACCGGAATGGTCACAAAGTG 398124487 102300 NM_138694.3(PKHD1):c.5236+1G>A PKHD1 Nov 01, 2012 MedGen:C0085548,OMIM:263200,Orphanet:ORPHA731,SNOMED CT:28770003 Autosomal recessive polycystic kidney disease germline 6 52024573 TTATTATTACAGCAGTGACGGAGAACTTCGGTAAGTCAAGCAAATAAGACAGCACACTTTC 753355844 259899 NM_152419.2(HGSNAT):c.1411G>A (p.Glu471Lys) HGSNAT Jun 05, 2017 MedGen:C0026706,SNOMED CT:88393000;MedGen:CN517202 Sanfilippo syndrome;not provided germline 8 43193790 CTTTACCACACCGAGGTGGCCTATGACCCCGAGGGCATCCTGGGCACCATCAACTCCATCG 111929350 51555 NM_000138.4(FBN1):c.5504G>A (p.Cys1835Tyr) FBN1 Aug 12, 2014 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:CN517202 Marfan syndrome;not provided germline 15 48452603 TCAACACTGCAGGCAGCTACCGCTGTGACTGTAAGCCCGGCTACCGCTTCACCTCCACAGG 80356461 23637 NM_175875.4(SIX5):c.472G>A (p.Ala158Thr) SIX5 Aug 27, 2009 MedGen:C1970479,OMIM:610896 Branchiootorenal syndrome 2 germline 19 45768373 GAGAGCCGCCCCTTCCCCGCCGCCCACCACGCCTTCCTGCAGGACCTCTACCTGCGCGCGC 587779550 107219 NM_000090.3(COL3A1):c.2815G>A (p.Gly939Ser) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189004135 CCAGGAGAGAAGGGATCGCCTGGTGCCCAGGGCCCACCAGTAAGTAACTTCATTTTTTTAA 864309637 17512 NM_000401.3(EXT2):c.1404+1G>A EXT2 Oct 01, 1996 MedGen:C1851413,OMIM:133701 Multiple exostoses type 2 germline 11 44171743 TATGAAGAATGGAATGACCCTCCTGCTGTGGTAAGTGAATTCCAGTGCTAGCCACATGAGG 121434238 18396 NM_006445.3(PRPF8):c.6929G>A (p.Arg2310Lys) PRPF8 Jul 15, 2001 MedGen:C1838702,OMIM:600059 Retinitis pigmentosa 13 germline 17 1650881 ACCCCAAAGAGTTCTACCACGAGGTGCACAGGCCCTCTCACTTCCTCAACTTTGCTCTCCT 587782217 244943 NM_024675.3(PALB2):c.3492G>A (p.Trp1164Ter) PALB2 Jan 26, 2016 MedGen:CN517202 not provided germline 16 23603528 CTCTGACCAACATTGGTCTTTTGTGAAATGGTCGGGTACAGACTCTCATTTGCTGGCTGGA 794727995 196416 NM_001098398.1(COPA):c.721G>A (p.Glu241Lys) COPA Jun 01, 2015 MedGen:C4225334,OMIM:616414,Orphanet:ORPHA444092 Autoimmune interstitial lung, joint, and kidney disease germline;inherited 1 160314111 TCTTTTTGTCCTTCAGAATCAAAGGCATGGGAGGTTGATACCTGCCGGGGCCATTACAACA 104886262 36020 NM_000495.4(COL4A5):c.3754G>A (p.Gly1252Ser) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108668468 TCTCCGGGTCCAGCTCTGGAAGGACCTAAAGGCAACCCTGGGCCCCAAGGTCCTCCTGGGA 587776658 22481 NM_000455.4(STK11):c.465-1G>A STK11 Jan 01, 1998 MeSH:D010580,MedGen:C0031269,OMIM:175200,Orphanet:ORPHA2869,SNOMED CT:54411001 Peutz-Jeghers syndrome germline 19 1220372 CGGCCCCAGGACGGGTGTGTGCTGCCCGCAGGTACTTCTGTCAGCTGATTGACGGCCTGGA 1085307752 415208 NM_000264.4(PTCH1):c.1068-1G>A PTCH1 Apr 06, 2017 MedGen:CN517202 not provided germline 9 95479148 ATGATGTGCCTTCCCTTGGACTGTGCTGCAGCGCCCATGCCCTGCAGACCATGTTCCAGTT 876658854 235752 NM_001042492.2(NF1):c.5812+1G>A NF1 Mar 16, 2015 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 17 31330499 AAGAGTGTATTTCTGGATTTAGCAAATCTAGTAAGTAATGATAATTTTCTTTAATACTAAC 104894788 26275 NM_004006.2(DMD):c.10019G>A (p.Cys3340Tyr) DMD Jul 01, 1996 MedGen:C4016476 Duchenne muscular dystrophy, mental retardation, and absence of erg b-wave germline X 31180437 AGCACTTTAATTATGACATCTGCCAAAGCTGCTTTTTTTCTGGTCGAGTTGCAAAAGGCCA 121913037 31694 NM_001113755.2(TYMP):c.433G>A (p.Gly145Arg) TYMP Jan 14, 2016 MedGen:C0872218,OMIM:603041,Orphanet:ORPHA298 Mitochondrial DNA depletion syndrome 1 (MNGIE type) germline 22 50528595 ATCCCTGACCACCAGGTGCCAATGATCAGCGGACGTGGTCTGGGGCACACAGGAGGCACCT 80055610 22195 NM_000492.3(CFTR):c.1679G>A (p.Arg560Lys) CFTR Jun 13, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline 7 117587833 GAGGTCAACGAGCAAGAATTTCTTTAGCAAGGTGAATAACTAATTATTGGTCTAGCAAGCA 863224974 213891 NM_000166.5(GJB1):c.44G>A (p.Arg15Gln) GJB1 Jun 05, 2017 MedGen:CN118851;MedGen:C0393808,OMIM:302800,Orphanet:ORPHA101075,SNOMED CT:230552007;MedGen:CN517202 Charcot-Marie-Tooth Neuropathy X;X-linked hereditary motor and sensory neuropathy;not provided germline X 71223751 GTTTGTACACCTTGCTCAGTGGCGTGAACCGGCATTCTACTGCCATTGGCCGAGTATGGCT 774966208 223689 NM_017617.4(NOTCH1):c.578G>A (p.Gly193Asp) NOTCH1 Jan 01, 2015 Human Phenotype Ontology:HP:0001636,MedGen:C0039685,OMIM:187500,Orphanet:ORPHA3303,SNOMED CT:86299006 Tetralogy of Fallot germline 9 136523014 GCCAGAAGCCCGGGCTTTGCCGCCACGGAGGCACCTGCCACAACGAGGTCGGCTCCTACCG 281875212 40294 NM_024110.4(CARD14):c.424G>A (p.Glu142Lys) CARD14 Nov 25, 2014 MedGen:C1864497,OMIM:602723;MedGen:CN517202 Psoriasis susceptibility 2;not provided germline 17 80183987 ATCGGCAGCCTGCAGGAGGAGCTGAACCAGGAAAAGGGGCAGAAGGAGGTGCTGCTGCGGC 200672755 211069 NM_006005.3(WFS1):c.2020G>A (p.Gly674Arg) WFS1 Feb 13, 2014 MedGen:CN517202 not provided germline 4 6301815 CTGACCTGGCAGCAGTATGGTGCGCTGTGCGGGCCACGCGCCTGGAAGGAGACCAACATGG -1 446698 NM_001111125.2(IQSEC2):c.2889+1G>A IQSEC2 Sep 27, 2017 MedGen:CN517202 not provided germline X 53243331 GTGGAGCGCATGATTGTTGGAAAGAAACCAGTAAGTGCCTTGGGAGGCTGCAGAGGGGCCA 762278237 259697 NM_001271208.1(NEB):c.12018+1G>A NEB Jun 23, 2017 MedGen:CN517202 not provided germline 2 151610515 GCCAAGGCCTCCAGGGACATCGCCAGTGACGTGAGTACCTTCCATCTAACTCTCTGTGGTC 879254012 245179 NM_000166.5(GJB1):c.112G>A (p.Val38Met) GJB1 Nov 29, 2016 MedGen:CN517202 not provided germline X 71223819 ATCTTCATCTTCAGAATCATGGTGCTGGTGGTGGCTGCAGAGAGTGTGTGGGGTGATGAGA 1114167382 413985 NM_000088.3(COL1A1):c.3045+1G>A COL1A1 Mar 16, 2017 MedGen:C0023931,OMIM:166200,SNOMED CT:385482004 Osteogenesis imperfecta type I germline;unknown 17 50188902 GCTGGACCCCCTGGTGAATCTGGACGTGAGGTGAGCAGTCCCCAGCCCCCATGCCAGTACC 180177235 200510 NM_000030.2(AGXT):c.533G>A (p.Cys178Tyr) AGXT Nov 27, 2014 MedGen:C0268164,OMIM:259900,Orphanet:ORPHA93598,SNOMED CT:65520001 Primary hyperoxaluria, type I germline 2 240872987 ATTCTGTCCCCCACCTCTCCAGGTACAAGTGCCTGCTCCTGGTGGATTCGGTGGCATCCCT 78769542 44530 NM_000492.3(CFTR):c.3209G>A (p.Arg1070Gln) CFTR Jun 01, 2015 MedGen:C0403814,OMIM:277180,Orphanet:ORPHA48;MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008;MedGen:C0238339,OMIM:167800,Orphanet:ORPHA676,SNOMED CT:68072000 Congenital bilateral absence of the vas deferens;Cystic fibrosis;Hereditary pancreatitis germline;unknown 7 117611650 AAGGACTATGGACACTTCGTGCCTTCGGACGGCAGCCTTACTTTGAAACTCTGTTCCACAA 104886098 35710 NM_000495.4(COL4A5):c.1139G>A (p.Gly380Asp) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108586721 AAGGAGAGCGAGGATTTCCTGGAATACAGGGTCCACCTGGCCTTCCTGGACCTCCAGGTAA 63750625 426838 NM_001171.5(ABCC6):c.3877G>A (p.Glu1293Lys) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16157668 CAGGGCGTGTCCTTCAAGATCCACGCAGGAGAGAAGGTGAGTGGTTCTCTCACAATGTCTT 387907360 59420 NM_005120.2(MED12):c.3443G>A (p.Arg1148His) MED12 Aug 11, 2016 MedGen:C3698541,OMIM:300895,Orphanet:ORPHA293707 Ohdo syndrome, X-linked germline X 71128686 GGCAGTGTTTGCTCCTGGAAGATCTGATTCGCTGTGCTGCCATCCCTTCACTCCTTAATGC 59115483 29696 NM_000424.3(KRT5):c.508G>A (p.Glu170Lys) KRT5 Jun 08, 2016 MedGen:C0080333,OMIM:131800,Orphanet:ORPHA79400;MedGen:C1832926,OMIM:601001;MedGen:CN517202 Epidermolysis bullosa simplex, Cockayne-Touraine type;Epidermolysis bullosa simplex, autosomal recessive;not provided germline 12 52519789 AGCATCCAGAGGGTGAGGACCGAGGAGCGCGAGCAGATCAAGACCCTCAACAATAAGTTTG 267607473 77496 NM_005555.3(KRT6B):c.1381G>A (p.Glu461Lys) KRT6B Aug 13, 2015 MedGen:CN517202 not provided germline 12 52447821 CTGATGAACGTCAAGCTGGCCCTGGATGTGGAGATCGCCACCTACCGCAAGCTGCTGGAGG 267606767 31844 NM_001361.4(DHODH):c.605G>A (p.Gly202Asp) DHODH Jan 01, 2010 MedGen:C0265257,OMIM:263750,SNOMED CT:66038001 Miller syndrome germline 16 72021211 AGGACTACGCAGAAGGGGTGCGCGTACTGGGCCCCCTGGCCGACTACCTGGTGGTGAATGT 121912584 15604 NM_018344.5(SLC29A3):c.1309G>A (p.Gly437Arg) SLC29A3 Dec 12, 2016 MedGen:C1864445,OMIM:602782,Orphanet:ORPHA168569;MedGen:CN517202 Histiocytosis-lymphadenopathy plus syndrome;not provided germline 10 71362489 GGCTACCTCAGCACCCTGGCCCTCCTCTACGGGCCTAAGATTGTGCCCAGGGAGCTGGCTG 863224972 213892 NM_001097642.2(GJB1):c.224G>A (p.Arg75Gln) GJB1 Mar 04, 2013 MedGen:C0393808,OMIM:302800,Orphanet:ORPHA101075,SNOMED CT:230552007 X-linked hereditary motor and sensory neuropathy germline X 71223931 ATGACCAATTCTTCCCCATCTCCCATGTGCGGCTGTGGTCCCTGCAGCTCATCCTAGTTTC 121912451 29813 NM_000454.4(SOD1):c.404G>A (p.Ser135Asn) SOD1 Jan 01, 1997 MedGen:C1862939,OMIM:105400 Amyotrophic lateral sclerosis type 1 germline 21 31668517 ATGACTTGGGCAAAGGTGGAAATGAAGAAAGTACAAAGACAGGAAACGCTGGAAGTCGTTT 387907033 39818 NM_001146261.2(SYT14):c.1451G>A (p.Gly484Asp) SYT14 Aug 12, 2011 MedGen:C3280226,OMIM:614229,Orphanet:ORPHA284271 Spinocerebellar ataxia, autosomal recessive 11 germline 1 210155872 CTGGAAGACTATCAGCAGAAGTGATAAAAGGCAGCCACTTCAAAAATTTGGCAGCAAACAG -1 431521 NM_005862.2(STAG1):c.1118G>A (p.Arg373Gln) STAG1 Aug 31, 2017 MedGen:CN429988,OMIM:617635;na MENTAL RETARDATION, AUTOSOMAL DOMINANT 47;STAG1-related disorder de novo;germline 3 136473546 TATTCCCCAAATTGGAACTATTCACTAACCGATTCAAGGTAAGCATCAAGAATGATAAGCT 132630268 26154 NM_000377.2(WAS):c.257G>A (p.Arg86His) WAS Nov 19, 2015 MedGen:C0043194,OMIM:277970,OMIM:301000,Orphanet:ORPHA906,SNOMED CT:36070007;MedGen:CN517202 Wiskott-Aldrich syndrome;not provided germline X 48684407 AGGATAACCCCCAGAAGTCCTACTTCATCCGCCTTTACGGCCTTCAGGTGACCCCCCCACC 869025180 22981 NM_000503.5(EYA1):c.639+1G>A EYA1 Jan 01, 2006 MedGen:CN034490,OMIM:166780 Otofaciocervical syndrome 1 germline 8 71299637 AATTCCTCTGGATTTAATAGTTCACAGCAGGTAATTTAAAAAGCCAGTTTAACTTCTGAAA 587779252 94805 NM_000179.2(MSH6):c.3020G>A (p.Trp1007Ter) MSH6 Sep 05, 2013 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Lynch syndrome germline 2 47801003 AATCTACCAAGAAGGGCTGTAAACGATACTGGACCAAAACTATTGAAAAGAAGTTGGCTAA 879255682 247647 NM_144997.5(FLCN):c.1532G>A (p.Trp511Ter) FLCN Jul 18, 2016 MedGen:C0346010,OMIM:135150,Orphanet:ORPHA122,SNOMED CT:110985001 Multiple fibrofolliculomas germline 17 17214991 ACCAGTGCCTCGTCTGCCTCAAGGAGGAGTGGATGAAGTAAGCAACAGTGTGGGTGAGGCC 267607120 18433 NM_147196.2(TMIE):c.170G>A (p.Trp57Ter) TMIE Jun 01, 2009 MedGen:C1832992,OMIM:600971 Deafness, autosomal recessive 6 germline 3 46705866 AGACAGTGGTGTTCTGGGACATGCGCCTGTGGCACGTGGTGGGCATCTTTTCGCTCTTCGT 58668703 426796 NM_001171.5(ABCC6):c.4254G>A (p.Arg1418=) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16150727 GCTCCTGTGTCTGGCACGTGCCCTTCTCCGGAAGACCCAGATCCTCATCCTGGACGAGGCT 387906511 27245 NM_000490.4(AVP):c.55G>A (p.Ala19Thr) AVP Aug 01, 1999 Human Phenotype Ontology:HP:0000863,MedGen:C0687720,OMIM:125700,Orphanet:ORPHA178029,SNOMED CT:45369008 Neurohypophyseal diabetes insipidus germline 20 3084620 TGCTTCCTCGGCCTACTGGCCTTCTCCTCCGCGTGCTACTTCCAGAACTGCCCGAGGGGCG 377274761 360963 NM_000153.3(GALC):c.850G>A (p.Gly284Ser) GALC Nov 08, 2016 Human Phenotype Ontology:HP:0000646,MedGen:C0002418;Human Phenotype Ontology:HP:0001623,MedGen:C0006157;Human Phenotype Ontology:HP:0002376,MedGen:C1855009;Human Phenotype Ontology:HP:0006978,MedGen:C3278204;Human Phenotype Ontology:HP:0002353,MedGen:C0151611;Human Phenotype Ontology:HP:0003457,MedGen:C0476403;Human Phenotype Ontology:HP:0003482,MedGen:C4025609;MedGen:C0023521,OMIM:245200,Orphanet:ORPHA487,SNOMED CT:192782005;Human Phenotype Ontology:HP:0001263,MedGen:C4020875;Human Phenotype Ontology:HP:0001269,MedGen:C0018989;Human Phenotype Ontology:HP:0001511,MedGen:C1386048;Human Phenotype Ontology:HP:0002415,MedGen:C0023520,Orphanet:ORPHA68356;Human Phenotype Ontology:HP:0006957,MedGen:C1849097;Human Phenotype Ontology:HP:0001998,MedGen:C0158986;Human Phenotype Ontology:HP:0000639,MedGen:C0028738;Human Phenotype Ontology:HP:0000529,MedGen:C3277697;Human Phenotype Ontology:HP:0001250,MedGen:C0036572;Human Phenotype Ontology:HP:0001518,MedGen:C0021288;Human Phenotype Ontology:HP:0002133,MedGen:C0038220;Human Phenotype Ontology:HP:0000486,MedGen:C0038379 Amblyopia;Breech presentation;Developmental regression;Dysmyelinating leukodystrophy;EEG abnormality;EMG abnormality;EMG: axonal abnormality;Galactosylceramide beta-galactosidase deficiency;Global developmental delay;Hemiparesis;Intrauterine growth retardation;Leukodystrophy;Loss of ability to walk;Neonatal hypoglycemia;Nystagmus;Progressive visual loss;Seizures;Small for gestational age;Status epilepticus;Strabismus germline;unknown 14 87968393 GAAGACTTTAGCACTTTAAATAGTGACATGGGTGCAGGCTGCTGGGGTCGCATTTTAAATC -1 484375 NM_000051.3(ATM):c.6615G>A (p.Trp2205Ter) ATM Dec 08, 2015 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 11 108325352 TAGACAACTCTCTGAAGTATATATTAAGTGGCAGAAACACTCCCAGCTTCTCAAGGACAGT 28936376 23994 NM_000098.2(CPT2):c.1657G>A (p.Asp553Asn) CPT2 Jan 01, 1995 MedGen:C1833508,OMIM:255110,Orphanet:ORPHA228302 Carnitine palmitoyltransferase II deficiency, myopathic, stress-induced germline 1 53213275 TCCATTTTGTTTCTCACAGGCCAGGGCTTTGACCGACACTTGTTTGCTCTGCGGCATCTGG 1057517698 359185 NM_181783.3(TMTC3):c.3G>A (p.Met1Ile) TMTC3 Dec 17, 2016 MedGen:C4310646,OMIM:617255 Lissencephaly 8 germline 12 88148318 TTTTTGTCCAGAAGTGCTTATAGAAAAGATGGCTAATATTAACCTAAAAGAAATAACCTTA 119485095 20077 NM_022041.3(GAN):c.505G>A (p.Glu169Lys) GAN Apr 01, 2009 MedGen:C1850386,OMIM:256850,Orphanet:ORPHA643,SNOMED CT:128207002 Giant axonal neuropathy germline 16 81354627 ACTCATTTCCGAGACGTCAGCAGCACGGAAGAATTCTTAGAGCTGAGTCCTCAAAAGCTTA 797045191 206628 NM_033409.3(SLC52A3):c.160G>A (p.Gly54Arg) SLC52A3 Mar 17, 2015 MedGen:CN029849,OMIM:211530 Brown-Vialetto-Van Laere syndrome 1 germline 20 765615 CTCACGGTGGTCATCCAGCTGGCCAACATCGGGCCCCTCCTGGTCACCCTGCTCCATCACT 587777320 132603 NM_000856.5(GUCY1A1):c.1086+1G>A GUCY1A1 Mar 06, 2014 MedGen:C3810403,OMIM:615750,Orphanet:ORPHA401945 Moyamoya disease 6 with achalasia germline 4 155711252 TGGGACAACTCTGTGAAAAAATCTTCAAGGGTAAGGAAAACATAATACTATCTTGAATATG 794728567 197456 NM_000218.2(KCNQ1):c.969G>A (p.Trp323Ter) KCNQ1 Jan 06, 2012 MedGen:CN517202 not provided germline 11 2583482 CGGCTATGGGGACAAGGTGCCCCAGACGTGGGTCGGGAAGACCATCGCCTCCTGCTTCTCT 121434458 24664 m.5591G>A MT-TA Feb 14, 2006 Human Phenotype Ontology:HP:0003737,MedGen:C0162670,OMIM:251900,Orphanet:ORPHA206966 Mitochondrial myopathy germline MT 5591 TTGCAATACTTAATTTCTGTAACAGCTAAGGACTGCAAAACCCCACTCTGCATCAACTGAA 111033612 26231 NM_139058.2(ARX):c.995G>A (p.Arg332His) ARX Feb 08, 2013 MedGen:C1846171,OMIM:300215,Orphanet:ORPHA452;MedGen:CN517202 Lissencephaly 2, X-linked;not provided germline X 25013000 GGCTGCTGAAACGCAAACAGAGGCGCTACCGCACCACGTTCACCAGCTACCAGCTGGAGGA 139353014 247347 NM_014617.3(CRYGA):c.239G>A (p.Arg80His) CRYGA Jul 29, 2016 Human Phenotype Ontology:HP:0000519,MedGen:C1842324 Congenital cataract inherited 2 208163217 TGGGCCTCAGCGACTCGGTCCAATCCTGCCGTATAATTCCTCATGTGAGTCTTGCTTCAAC -1 443646 NM_000038.5(APC):c.1263G>A (p.Trp421Ter) APC May 12, 2017 MedGen:CN517202 not provided germline 5 112819295 ACAGATACGCGCTTACTGTGAAACCTGTTGGGAGTGGCAGGAAGCTCATGAACCAGGCATG 121434303 20522 NM_006329.3(FBLN5):c.1235G>A (p.Gly412Glu) FBLN5 Jun 01, 2011 MedGen:C1837187,OMIM:608895 Age-related macular degeneration 3 germline 14 91870336 CCACCCTGGTGATGACACGCCCCATCAAAGGGCCCCGGGAAATCCAGCTGGACTTGGAAAT 730882035 180121 NM_000551.3(VHL):c.482G>A (p.Arg161Gln) VHL Sep 22, 2017 Gene:8056,MedGen:C1837915,OMIM:263400,Orphanet:ORPHA238557;MedGen:C0027672,SNOMED CT:699346009;MedGen:C0019562,OMIM:193300,Orphanet:ORPHA892,SNOMED CT:46659004;MedGen:C0019562,OMIM:193300,Orphanet:ORPHA892,SNOMED CT:46659004;MedGen:CN517202 Erythrocytosis, familial, 2;Hereditary cancer-predisposing syndrome;Von Hippel-Lindau syndrome;Von Hippel-Lindau syndrome;not provided germline 3 10149805 TTGCCCTTCCAGTGTATACTCTGAAAGAGCGATGCCTCCAGGTTGTCCGGAGCCTAGTCAA 121913134 29886 NM_000183.2(HADHB):c.1331G>A (p.Arg444Lys) HADHB Dec 01, 2009 MedGen:C0342786,OMIM:609015,SNOMED CT:237999008 Mitochondrial trifunctional protein deficiency germline 2 26285513 GCTGCAGGTTGGTCATGGCTGCTGCCAACAGATTACGGAAAGAAGGAGGCCAGTATGGCTT 121918348 23157 NM_005631.4(SMO):c.1685G>A (p.Arg562Gln) SMO Jan 01, 1998 MedGen:C3838465 Basal cell carcinoma, somatic somatic 7 129210997 TGACTGGGCAGAGTGACGATGAGCCAAAGCGGATCAAGAAGAGCAAGATGATTGCCAAGGC 141158996 22214 NM_000492.3(CFTR):c.2490+1G>A CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline;unknown 7 117592658 AGTGAAGAAATTAACGAAGAAGACTTAAAGGTAGGTATACATCGCTTGGGGGTATTTCACC 1057520918 376243 NM_001127221.1(CACNA1A):c.4046G>A (p.Arg1349Gln) CACNA1A Jan 09, 2017 MedGen:CN517202 not provided germline 19 13262780 TCAACACGATTAAATCCCTCCGAGTCCTCCGGGTGCTACGACCTCTTAAAACCATCAAGCG 1057518178 359780 NM_006772.2(SYNGAP1):c.1716G>A (p.Trp572Ter) SYNGAP1 Oct 28, 2016 MedGen:CN517202 not provided germline 6 33440768 GAGGGAGCTGAAGGAGGTGTTTGCTTCGTGGCGGCTGCGCTGCGCAGAGCGAGGCCGGGAG 587783285 167748 NM_018136.4(ASPM):c.8903G>A (p.Trp2968Ter) ASPM Feb 08, 2013 MedGen:C1837501,OMIM:608716 Primary autosomal recessive microcephaly 5 germline 1 197096082 CCTGCAAGATTCAAGCCTGGTATAGATGTTGGAGAGCACACAAAGAATATCTAGCTATATT 267606888 24759 m.4810G>A MT-ND2 Mar 22, 2005 MedGen:C1838979,OMIM:252010 Mitochondrial complex I deficiency germline MT 4810 TAAAACTAGGAATAGCCCCCTTTCACTTCTGAGTCCCAGAGGTTACCCAAGGCACCCCTCT 796065032 17282 NM_000433.3(NCF2):c.366+1G>A NCF2 Aug 19, 2016 MedGen:C1856245,OMIM:233710;MedGen:CN517202 Chronic granulomatous disease, autosomal recessive cytochrome b-positive, type 2;not provided germline 1 183577598 GGGCTCCAGTTCAAGCTGTTTGCCTGTGAGGTAAGGAGAACAGGGCCTGGCCTGGGCAGGA 281874695 47369 NM_000495.4(COL4A5):c.2483G>A (p.Gly828Glu) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108614998 TAGGTGTTCAGGGACCACCAGGACCACCAGGGATTCCTGGGCCAATAGGTCAACCTGGTAA 121912556 29871 NM_005543.3(INSL3):c.305G>A (p.Arg102His) INSL3 Sep 01, 2003 Human Phenotype Ontology:HP:0000028,MedGen:C0010417,OMIM:219050 Cryptorchidism, unilateral or bilateral germline 19 17816945 AGCCCCTGCCCCAGACCTCTCACCATCACCGCCACCACCGTGCAGCTGCCACCAACCCTGC 863225145 214242 NM_001134831.1(AHI1):c.2023G>A (p.Asp675Asn) AHI1 Feb 23, 2015 MedGen:C1837713,OMIM:608629 Joubert syndrome 3 unknown 6 135438388 GATGATCACTACATCCTTACTTCATCATCTGATGGCACTGCCAGGTTAGTATCCTTGAGAA 267607169 22798 NM_001017535.1(VDR):c.1036G>A (p.Val346Met) VDR Jan 01, 2008 MedGen:C0268690,OMIM:277440,SNOMED CT:72831007 Vitamin D-dependent rickets, type 2 germline 12 47844994 TCTATCCCCGTGCCCACAGATCGTCCTGGGGTGCAGGACGCCGCGCTGATTGAGGCCATCC 104886171 35843 NM_000495.4(COL4A5):c.2287G>A (p.Gly763Arg) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108606784 TTTGCATTACCTGGGCCACCTGGGCCACCAGGACTTCCAGGTTTCAAAGGAGCACTTGGTC 869025587 224174 NM_152464.2(TMEM199):c.376-1G>A TMEM199 Feb 29, 2016 MedGen:C4225190,OMIM:616829,Orphanet:ORPHA466703;MedGen:CN234782 CONGENITAL DISORDER OF GLYCOSYLATION, TYPE IIp;Congenital disorders of glycosylation type II germline 17 28360528 TTCTGAATCATCTTCTTTTTCTTTTTCCCAGGATACAAGACATGGTGGGACTCTCAGCGAC 202114767 404825 NM_000339.2(SLC12A3):c.2891G>A (p.Arg964Gln) SLC12A3 Sep 23, 2015 MedGen:C0268450,OMIM:263800,Orphanet:ORPHA358,SNOMED CT:3188003 Familial hypokalemia-hypomagnesemia maternal 16 56904402 CCACTCGGCTTTCTCCCGCCCAGTCCCTTCGGCAGGTGAGGCTGAATGAGATTGTGCTGGA 140883175 424401 NM_015512.4(DNAH1):c.3877G>A (p.Asp1293Asn) DNAH1 Jul 20, 2017 MedGen:CN337166,OMIM:617576 SPERMATOGENIC FAILURE 18 germline 3 52357632 CGGGCCCTGCAGGTGATCAATGTGTGTTCCGACCTGAGAATGCTGGACAGCCTGCGGGACT 794726762 213804 NM_001165963.1(SCN1A):c.264+5G>A SCN1A Jan 21, 2015 MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002 Severe myoclonic epilepsy in infancy germline 2 166073353 TGGACCCCTACTATATCAATAAGAAAGTGAGTGTTTTTTATCAGGCATATTTTGCTGCTAA 63751715 95090 NM_000249.3(MLH1):c.1038G>A (p.Gln346=) MLH1 Aug 29, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Lynch syndrome;not provided germline 3 37020463 CTCCAATTCCTCCAGGATGTACTTCACCCAGGTCAGGGCGCTTCTCATCCAGCTACTTCTC 72554337 103036 NM_000531.5(OTC):c.248G>A (p.Gly83Asp) OTC - MedGen:CN517202 not provided unknown X 38369827 ATTTGCCTTTATTGCAAGGGAAGTCCTTAGGCATGATTTTTGAGAAAAGAAGTACTCGAAC 377385081 237620 NM_016239.3(MYO15A):c.6340G>A (p.Val2114Met) MYO15A Feb 16, 2016 MedGen:C1838263,OMIM:600316 Deafness, autosomal recessive 3 germline 17 18145938 GCCCGGGAGAACATCTTCGGGAACTACATCGTGCAGAAGGGGCTGGCGGTGCCTGAGCTGC 886040799 261506 NM_000059.3(BRCA2):c.8910G>A (p.Trp2970Ter) BRCA2 Oct 18, 2016 MedGen:C2675520,OMIM:612555 Breast-ovarian cancer, familial 2 germline 13 32379472 AGGTTTATCAAGGGATGTCACAACCGTGTGGAAGTTGCGTATTGTAAGCTATTCAAAAAAA 606231238 48237 NM_144577.3(CCDC114):c.486+1G>A CCDC114 Feb 06, 2013 MedGen:C3540844,OMIM:615067 Ciliary dyskinesia, primary, 20 germline 19 48311552 TATCTGAACGTGGACCGCAAGCTGAAGAAGGTCAGTGGCCCTGAAATCCAGGGGAGGAGAC 104886066 35645 NM_000495.4(COL4A5):c.638G>A (p.Gly213Glu) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108577980 AGGGCCCTCCTGGTCCACCAGGACTTCCAGGACCTAAGGTAATTTTCTTTTTCTTTATATC 398124295 101603 NM_015506.2(MMACHC):c.608G>A (p.Trp203Ter) MMACHC Dec 02, 2013 MedGen:C1848561,OMIM:277400,Orphanet:ORPHA26 Methylmalonic acidemia with homocystinuria germline 1 45508974 TCGAAGGCTTCAATTTCCACTGGCGTGATTGGACTTACCGGGATGCTGTGACACCCCAGGA 786204082 185977 NM_000251.2(MSH2):c.491G>A (p.Gly164Glu) MSH2 Jul 26, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0009405,Orphanet:ORPHA443090;MedGen:C2936783,OMIM:120435 Hereditary cancer-predisposing syndrome;Hereditary nonpolyposis colon cancer;Lynch syndrome I germline 2 47410218 CAGTTGATGGCCAGAGACAGGTTGGAGTTGGGTATGTGGATTCCATACAGAGGAAACTAGG 142329098 224833 NM_030780.4(SLC25A32):c.440G>A (p.Arg147His) SLC25A32 Oct 05, 2016 MedGen:C4225187,OMIM:616839 Exercise intolerance, riboflavin-responsive germline 8 103403276 TTACAAACCCATTATGGGTAACAAAAACTCGCCTTATGTTACAGTATGATGCTGTTGTTAA 80359011 46678 NM_000059.3(BRCA2):c.7857G>A (p.Trp2619Ter) BRCA2 Jul 25, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline 13 32362574 TGTGGATCCAAAGCTTATTTCTAGAATTTGGGTTTATAATCACTATAGATGGATCATATGG 587779538 106987 NM_000090.3(COL3A1):c.1149+5G>A (p.Gly351_Pro383del) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188993464 GACACGCTGGTGCTCAAGGTCCTCCTGTAAGTATCATAGTTGAGAGGGAGTAAGCATAGTT 137853256 25923 NM_000284.3(PDHA1):c.943G>A (p.Asp315Asn) PDHA1 Aug 15, 2017 MedGen:C1839413,OMIM:312170,Orphanet:ORPHA79243 Pyruvate dehydrogenase E1-alpha deficiency germline X 19358959 GAAGAAATTCAGGAAGTAAGAAGTAAGAGTGACCCTATTATGCTTCTCAAGGACAGGATGG 752989523 213918 NM_003119.3(SPG7):c.1996G>A (p.Gly666Arg) SPG7 - MedGen:C1846564,OMIM:607259,Orphanet:ORPHA99013 Spastic paraplegia 7 germline 16 89553853 CGCATCGCCTACTCCATGGTGAAGCAGTTTGGGATGGCACCTGGCATCGGGCCCATCTCCT 794727058 191196 NM_001182.4(ALDH7A1):c.1093+1G>A ALDH7A1 Feb 23, 2015 MedGen:C1849508,OMIM:266100 Pyridoxine-dependent epilepsy germline 5 126555930 CACAGATCCGAGTTGGGAACCCATGGGACCGTGAGTATCTCCTTCTGCTTTCAAAGCGATC -1 485747 NM_000197.1(HSD17B3):c.454-1G>A HSD17B3 Apr 07, 2008 MedGen:C0033804 Pseudohermaphroditism germline 9 96249787 GCTGATGTGTGGTTGTGATTATTTATTACAGAGCCTCATCCATTGTAACATCACCTCCGTA 786205078 20858 NM_139025.4(ADAMTS13):c.331-1G>A ADAMTS13 Oct 01, 2004 MedGen:C1268935,OMIM:274150,Orphanet:ORPHA93583,SNOMED CT:373420004 Upshaw-Schulman syndrome germline 9 133425528 CGGGTTACCTCTCTCATCTGCCCTTGCACAGGGGGCAGAACTGCTTCGGGACCCGTCCCTG 132630285 26121 NM_001128834.2(PLP1):c.220G>A (p.Gly74Arg) PLP1 Jul 01, 1992 Human Phenotype Ontology:HP:0003269,MedGen:C0205711,OMIM:312080,Orphanet:ORPHA702,SNOMED CT:64855000 Pelizaeus-Merzbacher disease germline X 103786493 AGGATCCATGCCTTCCAGTATGTCATCTATGGAACTGCCTCTTTCTTCTTCCTTTATGGGG 118204448 15746 NM_000512.4(GALNS):c.871G>A (p.Ala291Thr) GALNS Jul 01, 2003 MedGen:C0086651,OMIM:253000,Orphanet:ORPHA309297,SNOMED CT:7259005 Mucopolysaccharidosis, MPS-IV-A germline 16 88835240 ACCTTCGTCTTCTTCACGTCGGACAACGGCGCTGCCCTCATTTCCGCCCCCGAACAAGGTG 121909387 16343 NM_001174089.1(SLC4A11):c.2216G>A (p.Arg739Gln) SLC4A11 Mar 01, 2008 MedGen:C0544008 Corneal endothelial dystrophy germline 20 3228684 ACCGCAGGATTGTGAACGTGAAGGAGACGCGGCTGACCTCGCTGGGCGCCAGCGTCCTGGT 796053350 202276 NM_003165.3(STXBP1):c.87+1G>A STXBP1 Sep 27, 2012 MedGen:CN517202 not provided germline 9 127651653 AAGAAGGTCAAGAAGAAGGGGGAATGGAAGGTGAGTAGAAAGTACAGTTAATGGGCTTAAG 28941471 17504 NM_000026.3(ADSL):c.569G>A (p.Arg190Gln) ADSL Sep 25, 2015 MedGen:C0268126,OMIM:103050,Orphanet:ORPHA46,SNOMED CT:15285008;MedGen:CN517202 Adenylosuccinate lyase deficiency;not provided germline 22 40358950 GCATGGATCTCCAGAACTTGAAGCGTGTCCGAGATGACCTGCGCTTCCGGGGAGTAAAGGG 72659338 32322 NM_000089.3(COL1A2):c.3295G>A (p.Gly1099Arg) COL1A2 Mar 01, 2009 MedGen:C0268362,OMIM:259420,Orphanet:ORPHA216812,SNOMED CT:385483009 Osteogenesis imperfecta type III germline 7 94427654 CAGGGCCCCCCTGGTCCCCCTGGCCCTCCTGGACCTCCAGGTGTAAGCGGTGGTGGTTATG 137852825 15558 NM_001999.3(FBN2):c.3758G>A (p.Cys1253Tyr) FBN2 Dec 01, 1995 MedGen:C0220668,OMIM:121050,Orphanet:ORPHA115,SNOMED CT:205821003 Congenital contractural arachnodactyly germline 5 128335544 TTGATGAATGTATGATAATGAACGGAGGCTGTGACACCCAGTGCACAAATTCAGAGGGAAG 869025341 223777 NM_000702.3(ATP1A2):c.571G>A (p.Val191Met) ATP1A2 Feb 18, 2016 MedGen:C1865322,OMIM:602481 Familial hemiplegic migraine type 2 germline 1 160124371 GAGGAAGTGGTGGTGGGAGACCTGGTGGAGGTGAAGGGTGGAGACCGCGTCCCTGCTGACC 67507747 260184 NM_000088.3(COL1A1):c.1678G>A (p.Gly560Ser) COL1A1 Apr 20, 2017 MedGen:C0023931,OMIM:166200,SNOMED CT:385482004;MedGen:C0268360,OMIM:166210,SNOMED CT:86470003;MedGen:CN517202 Osteogenesis imperfecta type I;Osteogenesis imperfecta, recessive perinatal lethal;not provided germline;maternal 17 50194032 TTTCGTGCCTCCCATCCTTAGGGTCCCGCCGGTCAAGATGGTCGCCCCGGACCCCCAGGCC 193922717 45445 NM_139276.2(STAT3):c.1243G>A (p.Glu415Lys) STAT3 Oct 30, 2014 MedGen:C4014795,OMIM:615952,Orphanet:ORPHA438159;MedGen:C0022398,OMIM:147060,SNOMED CT:50926003 Autoimmune disease, multisystem, infantile-onset, 1;Hyperimmunoglobulin E syndrome de novo;germline 17 42329448 TGCCTTTTTCTTTTCTTACAGACCCTGAGGGAGCAGAGATGTGGGAATGGGGGCCGAGCCA 267608653 153528 NM_003159.2(CDKL5):c.2152G>A (p.Val718Met) CDKL5 Mar 19, 2014 MedGen:C1839333,OMIM:300672;MedGen:CN517202 Early infantile epileptic encephalopathy 2;not provided de novo;germline X 18609570 GTGCCAAGGAGAGTTGGTAGCTTTTACAGAGGTAAGCCCACCCCCGGCATTCAACAGGTTC 121912858 32443 NM_000092.4(COL4A4):c.3601G>A (p.Gly1201Ser) COL4A4 Jan 01, 1997 MedGen:C1567744,OMIM:203780,Orphanet:ORPHA88919 Alport syndrome, autosomal recessive germline 2 227032253 CATTAAGGTTTGCATGATGTGGGGCCACCTGGTCCAGTGGGAATACCTGGGCTAAAAGGGG 28942109 17962 NM_001033503.2(SAR1B):c.409G>A (p.Asp137Asn) SAR1B Feb 11, 2016 MedGen:C0795956,OMIM:246700,Orphanet:ORPHA71 Chylomicron retention disease germline 5 134608443 GTGCCTATACTGATTCTTGGGAATAAGATCGACAGACCTGAAGCCATCAGTGAAGAGAGGT 515726192 136340 NM_015713.4(RRM2B):c.583G>A (p.Gly195Arg) RRM2B Apr 17, 2014 MedGen:CN187502 RRM2B-related mitochondrial disease germline 8 102218915 GAAAGAGTGGTGGCCTTTGCTGCTGTAGAAGGAGTTTTCTTCTCAGGATCTTTTGCTGCTA 794729273 199226 NM_001256850.1(TTN):c.48432G>A (p.Trp16144Ter) TTN Nov 23, 2016 MedGen:CN517202 not provided germline 2 178607247 AACAAACAGAAAAATGTGTCTACTTAACTGGTCTGATCCAGAAGATGATGGAGGAAGTGAA 587779676 107180 NM_000090.3(COL3A1):c.636+1G>A (p.Gly195_Ser212del) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188988644 CCTGGTGAACCTGGGCAAGCTGGTCCTTCAGTAAGTAACAATTAAATTTATATTTAGTAAG 104893875 29049 NM_000345.3(SNCA):c.136G>A (p.Glu46Lys) SNCA Mar 04, 2005 MedGen:C0752347,OMIM:127750 Lewy body dementia germline 4 89828170 GAATTTGTTTTTGTAGGCTCCAAAACCAAGGAGGGAGTGGTGCATGGTGTGGCAACAGGTA 1060501324 391291 NM_001128425.1(MUTYH):c.1047G>A (p.Trp349Ter) MUTYH Mar 31, 2016 MedGen:C1837991,OMIM:608456,Orphanet:ORPHA247798 MYH-associated polyposis germline 1 45331800 CCACCTGTGCCTGCCTCCCTCGGAGCCCTGGGACCAGACCCTGGGAGTGGTCAACTTCCCC 397507507 48960 NM_002834.4(PTPN11):c.178G>A (p.Gly60Ser) PTPN11 Jan 15, 2015 MeSH:D009634,MedGen:C0028326,Orphanet:ORPHA648,SNOMED CT:205824006;MedGen:CN517202 Noonan syndrome;not provided germline 12 112450358 GCTGTCACCCACATCAAGATTCAGAACACTGGTGATTACTATGACCTGTATGGAGGGGAGA 431905518 102926 NM_206883.2(SLC26A5):c.209G>A (p.Trp70Ter) SLC26A5 Feb 10, 2014 MedGen:C3151230,OMIM:613865 Deafness, autosomal recessive 61 germline 7 103420821 TCATTTATATGTTCCTACCCATAACTAAATGGCTGCCAGCATACAAATTCAAGGAATATGT 527236068 152826 NM_001142800.1(EYS):c.6557G>A (p.Gly2186Glu) EYS - Human Phenotype Ontology:HP:0000547,MeSH:D012174,MedGen:C0035334,OMIM:268000,Orphanet:ORPHA791,SNOMED CT:28835009 Retinitis pigmentosa not provided 6 64081870 ACTTGACTATAAAAACAAACAGTTTAAATGGAACTATTCTTTACAGTGAGTATTAAATGTT 1057520844 365825 NM_021007.2(SCN2A):c.4904G>A (p.Arg1635Gln) SCN2A Dec 29, 2016 MedGen:CN517202 not provided germline 2 165388710 TCCGAGTGATCCGTCTTGCCAGGATTGGCCGAATCCTACGTCTGATCAAAGGAGCAAAGGG 121909640 31337 NM_023110.2(FGFR1):c.142G>A (p.Gly48Ser) FGFR1 Oct 01, 2006 MedGen:C1563720,OMIM:147950 Kallmann syndrome 2 germline 8 38429898 GTGGAAGTGGAGTCCTTCCTGGTCCACCCCGGTGACCTGCTGCAGCTTCGCTGTCGGCTGC 74315438 19891 NM_001146077.1(CLDN14):c.301G>A (p.Gly101Arg) CLDN14 Jun 01, 2005 MedGen:C3279660,OMIM:614035 Deafness, autosomal recessive 29 germline 21 36461395 TCGGGCATAGCCTGCGCCTGCGCCGTCATCGGGATGAAGTGCACGCGCTGCGCCAAGGGCA 104886440 35653 NM_000495.4(COL4A5):c.687+1G>A COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108578120 TTAAATTTCCAGGGACCCAAAGGTGAAAAAGTGAGTAAAGAAAGAGAGCTGGTTATTCAGC 180177203 200472 NM_000030.2(AGXT):c.332G>A (p.Arg111Gln) AGXT Nov 27, 2014 MedGen:C0268164,OMIM:259900,Orphanet:ORPHA93598,SNOMED CT:65520001 Primary hyperoxaluria, type I germline 2 240869336 TGGTTGGGGCCAATGGCATTTGGGGGCAGCGAGCCGTGGACATCGGGGAGCGCATAGGTAA -1 439709 NM_005956.3(MTHFD1):c.1674G>A (p.Thr558=) MTHFD1 Nov 21, 2017 MedGen:CN635903,OMIM:617780 COMBINED IMMUNODEFICIENCY AND MEGALOBLASTIC ANEMIA WITH OR WITHOUT HYPERHOMOCYSTEINEMIA germline 14 64439172 GGCTCCAACGGAGAAGGGTCACACACGGACGGTAACAATTTGTCCCTTTCCAAGGAAATTA 267607237 22575 NM_003482.3(KMT2D):c.15536G>A (p.Arg5179His) KMT2D Aug 18, 2014 MedGen:CN030661,OMIM:147920 Kabuki syndrome 1 germline 12 49026430 TTCAGCGGGGAGAACGGCTGCACATGTTCCGTGTGGGGGGCCTTGTGTTCCACGCCATCGG 120074179 18157 NM_000218.2(KCNQ1):c.760G>A (p.Val254Met) KCNQ1 Jul 29, 2017 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MeSH:D008133,MedGen:C0023976,SNOMED CT:9651007;MedGen:C0035828,OMIM:192500,Orphanet:ORPHA101016,SNOMED CT:20852007;MedGen:C0035828,OMIM:192500,Orphanet:ORPHA101016,SNOMED CT:20852007;MedGen:CN517202 Congenital long QT syndrome;Long QT syndrome;Long QT syndrome 1;Long QT syndrome 1;not provided germline 11 2572089 CAGGGAGGCACCTGGAGGCTCCTGGGCTCCGTGGTCTTCATCCACCGCCAGGTGGGTGGCC 778031266 223599 NM_000051.3(ATM):c.6198+1G>A ATM Mar 09, 2017 MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline;unknown 11 108316114 TCATCAACACGCCAGGCAGGAATCATTCAGGTACATTTTTTCCCAGATTTGGTAAAGCCAT 121964998 26997 NM_000191.2(HMGCL):c.835G>A (p.Glu279Lys) HMGCL Oct 01, 2000 MedGen:C0268601,OMIM:246450,SNOMED CT:124611007 Deficiency of hydroxymethylglutaryl-CoA lyase germline 1 23804441 GCACAGGGGGCATCAGGAAACTTGGCCACAGAAGACCTGGTCTACATGCTAGAGGGCTTGG 201330912 106501 NM_004366.5(CLCN2):c.1709G>A (p.Trp570Ter) CLCN2 Sep 09, 2015 MedGen:C3810242,OMIM:615651,Orphanet:ORPHA363540 Leukoencephalopathy with ataxia germline 3 184354113 AGAAACTGCCCTACCTGCCTGAGCTCGGCTGGGGCCGCCACCAGTACGGAGGGCTGGGTGC 150203483 214823 NM_177550.4(SLC13A5):c.1022G>A (p.Trp341Ter) SLC13A5 Nov 01, 2015 MedGen:C4014621,OMIM:615905 Epileptic encephalopathy, early infantile, 25 germline 17 6695759 TCTCCCGAGACCCCGGCTTCATGCCCGGCTGGCTGACTGTTGCCTGGGTGGAGGGTGAGAC 193922702 44799 NM_020638.2(FGF23):c.536G>A (p.Arg179Gln) FGF23 Dec 05, 2013 MedGen:C0342642,OMIM:193100,Orphanet:ORPHA89937,SNOMED CT:237889002 Autosomal dominant hypophosphatemic rickets germline;paternal 12 4370563 TCAACACCCCCATACCACGGCGGCACACCCGGAGCGCCGAGGACGACTCGGAGCGGGACCC 587777357 132675 NM_178014.3(TUBB):c.1201G>A (p.Glu401Lys) TUBB Dec 27, 2012 MedGen:C4014283,OMIM:615771 Cortical dysplasia, complex, with other brain malformations 6 germline 6 30724263 CGGAAGGCCTTCCTCCACTGGTACACAGGCGAGGGCATGGACGAGATGGAGTTCACCGAGG 879254804 246009 NM_000527.4(LDLR):c.1136G>A (p.Cys379Tyr) LDLR Mar 25, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11111589 TGAACCTGGAGGGTGGCTACAAGTGCCAGTGTGAGGAAGGCTTCCAGCTGGACCCCCACAC 397517976 57550 NM_206933.2(USH2A):c.11954G>A (p.Trp3985Ter) USH2A Jun 21, 2011 MedGen:C1848634,OMIM:276901 Usher syndrome, type 2A germline 1 215728142 CCACGAGTGCTCATTCAGTTCTGTTGAATTGGACAAAGCCAGAATCTCCCAATGGCATTAT 80357212 70255 NM_007294.3(BRCA1):c.5467G>A (p.Ala1823Thr) BRCA1 Oct 02, 2015 MedGen:C2676676,OMIM:604370 Breast-ovarian cancer, familial 1 germline 17 43047643 GATGCCTGGACAGAGGACAATGGCTTCCATGGTAAGGTGCCTGCATGTACCTGTGCTATAT 113994123 15734 NM_001145320.1(ADAMTSL2):c.340G>A (p.Glu114Lys) ADAMTSL2 Jun 17, 2017 MedGen:C3278147,OMIM:231050,SNOMED CT:28557005 Geleophysic dysplasia 1 germline;inherited 9 133539801 GAGTGTCCGCCGGACGGGAGGAGCTTCCGCGAGGAGCAGTGCGTCTCCTTCAACTCCCACG 119455954 17681 NM_000391.3(TPP1):c.1094G>A (p.Cys365Tyr) TPP1 May 23, 2017 MedGen:C1876161,OMIM:204500,Orphanet:ORPHA228349;MedGen:C0027877,OMIM:214200,Orphanet:ORPHA216,SNOMED CT:42012007;MedGen:CN517202 Ceroid lipofuscinosis neuronal 2;Neuronal ceroid lipofuscinosis;not provided germline;unknown 11 6616056 GGTCTCTCTCAGGTGACAGTGGGGCCGGGTGTTGGTCTGTCTCTGGAAGACACCAGTTCCG 61752406 105033 NM_000350.2(ABCA4):c.2564G>A (p.Trp855Ter) ABCA4 Nov 14, 2016 MeSH:C535804,MedGen:C1855465,OMIM:248200;MedGen:CN517202 Stargardt disease 1;not provided germline 1 94055134 TTGATGCTGCTGTCTATGGCTTACTCGCTTGGTACCTTGATCAGGTGTTTCCAGGTAAGCA 121908667 21317 NM_002335.3(LRP5):c.2202G>A (p.Trp734Ter) LRP5 Nov 16, 2001 MedGen:C0432252,OMIM:259770,Orphanet:ORPHA2788,SNOMED CT:254112001 Osteoporosis with pseudoglioma germline 11 68410024 CGTTGACTGGATGGGCAAGAACCTCTACTGGGCCGACACTGGGACCAACAGAATCGAAGTG -1 440779 NM_015560.2(OPA1):c.2334G>A (p.Trp778Ter) OPA1 May 25, 2017 MedGen:CN517202 not provided germline 3 193659540 TCCAGACTGGAAAAAGAGGTGGTTATACTGGAAGAATCGGACCCAAGAACAGGTAGAAATA 114303883 426969 NM_001171.5(ABCC6):c.2125G>A (p.Glu709Lys) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16182534 GAGGCCTGGGTGCAGAACACCTCTGTGGTAGAGAATGTGTGCTTCGGGCAGGAGCTGGACC 121918785 79485 NM_006920.4(SCN1A):c.2552G>A (p.Arg851Gln) SCN1A Dec 20, 2014 MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002 Severe myoclonic epilepsy in infancy de novo 2 166039427 TGGAAGGATTATCTGTTCTCCGTTCATTTCGATTGGTAAAAAAAAAAAAAAAAAGCACCAA 886041547 264898 NM_001271.3(CHD2):c.4413+1G>A CHD2 Aug 05, 2016 MedGen:CN517202 not provided germline 15 93004752 GATGATCTGGACCAGGAGACATTCAGCATAGTAAGTCTTGAAATCGGGGGGTGCCAGTGTC 66468541 32596 NM_199440.1(HSPD1):c.292G>A (p.Val98Ile) HSPD1 May 01, 2002 MedGen:C1854467,OMIM:605280,Orphanet:ORPHA100994 Spastic paraplegia 13 germline 2 197497275 GATAAATACAAAAACATTGGAGCTAAACTTGTTCAAGATGTTGCCAATAACACAAATGAAG 398123019 51190 NM_032957.4(RTEL1):c.823G>A (p.Glu275Lys) RTEL1 Apr 23, 2013 MedGen:C3554656,OMIM:615190 Dyskeratosis congenita, autosomal recessive, 5 germline 20 63672607 GACCTGAAGGGGACAGTCGTGATCTTTGACGAAGCTCACAACGTGGTGAGTCTCCGCTGGC 386834233 76679 NM_183050.3(BCKDHB):c.832G>A (p.Gly278Ser) BCKDHB Jul 08, 2016 MedGen:C0024776,OMIM:248600,SNOMED CT:27718001;MedGen:C1855370 Maple syrup urine disease;Maple syrup urine disease type 1B germline;unknown 6 80201023 GAAGGGAGTGATGTTACTCTAGTTGCCTGGGGCACTCAGGTGAGTAGCATTGATCCCAACT 886041788 264788 NM_020461.3(TUBGCP6):c.1833+1G>A TUBGCP6 May 17, 2016 MedGen:CN517202 not provided germline 22 50226049 ATTAACCTGCTGAAGCTCTGCTGCCCCCGGGTGAGGAGGGGCTCATGTGTGGGGAAGAGAG 864622551 222614 NM_000267.3(NF1):c.5205+5G>A NF1 Oct 05, 2015 MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003 Neurofibromatosis, type 1 germline 17 31326257 ACAAAGACACCAAAGTTTCTATTAAAGTAAGTTCCAGTCTGTGTTTTGTAAACGATTCATT 886039338 260318 NM_000397.3(CYBB):c.1449G>A (p.Trp483Ter) CYBB Jun 27, 2016 MedGen:CN517202 not provided germline X 37806521 CCTCAGCTACAACATCTACCTCACTGGCTGGGATGAGTCTCAGGTAAGGACAAGACTCCAA 120074184 18162 NM_000218.2(KCNQ1):c.940G>A (p.Gly314Ser) KCNQ1 Nov 09, 2016 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MedGen:C0035828,OMIM:192500,Orphanet:ORPHA101016,SNOMED CT:20852007;MedGen:CN517202 Congenital long QT syndrome;Long QT syndrome 1;not provided germline 11 2583453 CTCTCCCTGCAGGTCACAGTCACCACCATCGGCTATGGGGACAAGGTGCCCCAGACGTGGG 72549332 31353 NM_001002294.2(FMO3):c.1302G>A (p.Met434Ile) FMO3 Dec 01, 2000 Human Phenotype Ontology:HP:0003614,MedGen:C0342739,OMIM:602079,Orphanet:ORPHA468726,SNOMED CT:237959005 Trimethylaminuria germline 1 171117145 GACCATACAGACAGATTACATTGTTTATATGGATGAACTCTCCTCCTTCATTGGGGCAAAG 886041296 432176 NM_000444.5(PHEX):c.1768+1G>A PHEX Jun 12, 2017 MedGen:C0733682,OMIM:307800,Orphanet:ORPHA89936,SNOMED CT:82236004 Familial X-linked hypophosphatemic vitamin D refractory rickets germline X 22219104 ATGAATTTACACATGGATTTGATAATAATGGTAAGTACCGGTTCATTTTATAAGCTGCTGC 730882175 181517 NM_002238.3(KCNH1):c.1405G>A (p.Gly469Arg) KCNH1 Nov 16, 2017 Gene:353173,MedGen:CN032818,OMIM:135500;MedGen:CN517202 Zimmermann-Laband syndrome 1;not provided de novo;germline 1 210804143 CCTCTAGCACTTCTCTATGCCACCATCTTCGGGAATGTGACGACTATTTTCCAACAGATGT 121918179 15939 NM_000181.3(GUSB):c.1521G>A (p.Trp507Ter) GUSB Apr 01, 1995 MedGen:C0085132,OMIM:253220,Orphanet:ORPHA584 Mucopolysaccharidosis type VII germline 7 65967863 TGTGATCTGTTTGAACAGCTACTACTCTTGGTATCACGACTACGGGCACCTGGAGTTGATT 527236154 152923 NM_001194958.2(KCNJ18):c.502G>A (p.Val168Met) KCNJ18 Jul 31, 2014 MedGen:C0268446,OMIM:188580,Orphanet:ORPHA79102,SNOMED CT:30967002 Thyrotoxic periodic paralysis germline 17 21703288 GCCGTCTTCATGGTGGTGGCCCAGTCCATCGTGGGCTGCATCATCGACTCCTTCATGATTG 80356611 45094 NM_000525.3(KCNJ11):c.149G>A (p.Arg50Gln) KCNJ11 Aug 30, 2016 MedGen:C0158981,Orphanet:ORPHA224,SNOMED CT:49817004;MedGen:CN517202 Neonatal diabetes mellitus;not provided germline 11 17387943 GCAACTGCAACGTGGCCCACAAGAACATCCGGGAGCAGGGCCGCTTCCTGCAGGACGTGTT 121917775 27238 NM_003380.3(VIM):c.451G>A (p.Glu151Lys) VIM Mar 15, 2009 MedGen:C3805411,OMIM:116300;MedGen:CN517202 Cataract 30;not provided germline 10 17229873 CAAGGCAAGTCGCGCCTGGGGGACCTCTACGAGGAGGAGATGCGGGAGCTGCGCCGGCAGG 121912832 32469 NM_000094.3(COL7A1):c.6007G>A (p.Gly2003Arg) COL7A1 Jan 07, 2016 MedGen:C0268371,OMIM:132000,SNOMED CT:2689001;MedGen:CN517202 Dominant dystrophic epidermolysis bullosa with absence of skin;not provided germline 3 48575512 CAGGGCCCCATCGGCTTTCCTGGAGAACGCGGGCTGAAGGGCGACCGTGGAGACCCTGGCC 16969925 75309 NM_001037.4(SCN1B):c.254G>A (p.Arg85His) SCN1B Feb 20, 2017 MedGen:C3809311,OMIM:615377;MedGen:CN517202 Atrial fibrillation, familial, 13;not provided germline 19 35033545 ATGAGGTGTTGCAGCTGGAGGAGGATGAGCGCTTCGAGGGCCGCGTGGTGTGGAATGGCAG 587777060 77876 NM_080860.3(RSPH1):c.308G>A (p.Gly103Asp) RSPH1 Sep 05, 2013 MedGen:C3809634,OMIM:615481 Primary ciliary dyskinesia 24 germline 21 42486428 AGTGGGCAAATGACCTGCGGCACGGCCATGGCGTATACTACTACATCAATAATGACACCTA 387906721 38932 NM_194277.2(FRMD7):c.812G>A (p.Cys271Tyr) FRMD7 Mar 01, 2011 MedGen:C1839580,OMIM:310700 Infantile nystagmus, X-linked germline X 132082456 GAGATGCCTGCAAGGCTTTCTGGAAGACTTGTGTGGAATACCATGCTTTCTTCAGGCTTTC 137852336 25437 NM_000402.4(G6PD):c.1319G>A (p.Gly440Asp) G6PD May 24, 2017 MedGen:C2720289,OMIM:300908,Orphanet:ORPHA466026;na Anemia, nonspherocytic hemolytic, due to G6PD deficiency;G6PD JAPAN germline X 154532625 TGTACACCAAGATGATGACCAAGAAGCCGGGCATGTTCTTCAACCCCGAGGAGTCGGAGCT 137854478 31496 NM_000138.4(FBN1):c.3217G>A (p.Glu1073Lys) FBN1 Apr 28, 2017 MedGen:C2697932,Orphanet:ORPHA60030,SNOMED CT:446263001;MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:C4016054;MedGen:CN517202;MedGen:CN169374 Loeys-Dietz syndrome;Marfan syndrome;Marfan syndrome, neonatal;not provided;not specified germline 15 48488233 GCCACTTGCTGTTTTTGTGCAGACATTGACGAATGCCGCATATCTCCTGACCTCTGTGGCA 121434452 22314 NM_003321.4(TUFM):c.1016G>A (p.Arg339Gln) TUFM Jan 01, 2007 MedGen:C1857682,OMIM:610678,Orphanet:ORPHA254925 Combined oxidative phosphorylation deficiency 4 germline 16 28844008 TCCGAGGCTTGAAGCGGGAGGACTTGCGGCGGGGCCTGGTCATGGTCAAGCCAGGTTCCAT -1 439862 NM_032861.3(SERAC1):c.1577G>A (p.Gly526Glu) SERAC1 - MedGen:C3553597,OMIM:614739,Orphanet:ORPHA352328 3-methylglutaconic aciduria with deafness, encephalopathy, and Leigh-like syndrome germline 6 158114896 AAATGAGTACTGTTATCAACAATACCAGAGGAATAATTTTTTATAGTGTCCCTCATCATGG 587776789 409030 NM_000321.2(RB1):c.607+1G>A RB1 Jan 27, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline 13 48349024 TTTCTTGGATCACATTTTTATTAGCTAAAGGTAAGTTCATTATATTTATTAAATGCTAATA 104893991 24341 NM_001024630.3(RUNX2):c.674G>A (p.Arg225Gln) RUNX2 Nov 01, 1999 MedGen:C0008928,OMIM:119600,Orphanet:ORPHA1452,SNOMED CT:65976001 Cleidocranial dysostosis germline 6 45438040 GAGCAATTAAAGTTACAGTAGATGGACCTCGGGAACCCAGAAGTAAGTACTCCCCTTTTTA 878854181 242121 NM_001113378.1(FANCI):c.507G>A (p.Trp169Ter) FANCI Jan 30, 2016 MedGen:C0015625,Orphanet:ORPHA84,SNOMED CT:30575002 Fanconi anemia germline 15 89263422 ATAAACTTTGTCATTTTCTTCTACCAGGTGGGATCAGCAATATGTAATCCAACTCACCTCC 267607850 95328 NM_000249.3(MLH1):c.1731+5G>A MLH1 Oct 31, 2016 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Lynch syndrome germline 3 37042336 CCAATTTTGGTGTTCTCAGGTTATCGGTAAGTTTAGATCCTTTTCACTTCTGAAATTTCAA 397515438 50319 NM_032801.4(JAM3):c.656G>A (p.Cys219Tyr) JAM3 Apr 08, 2013 MedGen:C3151000,OMIM:613730,Orphanet:ORPHA306547 Hemorrhagic destruction of the brain, subependymal calcification, and cataracts germline 11 134145989 TTCACAAGGACGACTCTGGGCAGTACTACTGCATTGCTTCCAATGACGCAGGCTCAGCCAG 118192233 203731 NM_172107.3(KCNQ2):c.1632-1G>A KCNQ2 Jul 26, 2013 MedGen:CN517202 not provided germline 20 63413582 AGGGCTCACAGCCCCACCCACCCCCCTGCAGTGTCATGCGGTTCCTGGTGTCCAAGCGGAA 886041223 264979 NM_000444.5(PHEX):c.733-1G>A PHEX Jul 16, 2016 MedGen:CN517202 not provided germline X 22093982 TCATGGTCACTTTGTTCTTTATTTCTTACAGTATCGGGATGCCCTTTACAAGTTCATGGTG 121918166 15994 NM_000275.2(OCA2):c.1327G>A (p.Val443Ile) OCA2 May 18, 2017 MedGen:C0078918,Orphanet:ORPHA55,SNOMED CT:63844009;MedGen:C1856895,OMIM:227220;MedGen:C0268495,OMIM:203200,Orphanet:ORPHA79432,SNOMED CT:26336006;MedGen:C0268495,OMIM:203200,Orphanet:ORPHA79432,SNOMED CT:26336006;MedGen:CN517202 Oculocutaneous albinism;Skin/hair/eye pigmentation, variation in, 1;Tyrosinase-positive oculocutaneous albinism;Tyrosinase-positive oculocutaneous albinism;not provided germline;paternal;unknown 15 27985101 GCGGCCGTCCTCTCTGCCTTCTTGGACAACGTCACCACCATGCTCCTCTTCACGCCTGTGA 74315334 22991 NM_000261.1(MYOC):c.1099G>A (p.Gly367Arg) MYOC Aug 16, 2016 MedGen:C1842028,OMIM:137750;MedGen:CN517202 Primary open angle glaucoma juvenile onset 1;not provided germline 1 171636341 GAGAAGGAAATCCCTGGAGCTGGCTACCACGGACAGTTCCCGTATTCTTGGGGTGGCTACA 104894584 23966 NM_000891.2(KCNJ2):c.514G>A (p.Asp172Asn) KCNJ2 Apr 15, 2005 MedGen:C1865018,OMIM:609622;MedGen:C2348199,Orphanet:ORPHA51083 Short QT syndrome 3;short QT syndrome germline 17 70175553 GTGTTCCAGTCAATCGTGGGCTGCATCATCGATGCTTTCATCATTGGCGCAGTCATGGCCA 104894154 16842 NM_000102.3(CYP17A1):c.374G>A (p.Arg125Gln) CYP17A1 Oct 01, 2006 MedGen:CN042980 Complete combined 17-alpha-hydroxylase/17,20-lyase deficiency germline 10 102835316 CTGACTCTGGCGCACACTGGCAGCTGCATCGAAGGCTGGCGATGGCCACCTTTGCCCTGTT 397515343 17823 NM_000158.3(GBE1):c.143+1G>A GBE1 Apr 02, 2009 MedGen:CN734586;MedGen:C0017923,OMIM:232500,SNOMED CT:11179002 Glycogen storage disease IV, fatal perinatal neuromuscular;Glycogen storage disease, type IV germline 3 81761374 GAAGCCCTACGCCGTGGACTTCCAGCGCAGGTACCGCCGGAATCCCACCACCCCCACTTAG 104894295 22393 NM_006918.4(SC5D):c.86G>A (p.Arg29Gln) SC5D Oct 01, 2002 MedGen:C1846421,OMIM:607330,Orphanet:ORPHA46059 Lathosterolosis germline 11 121303461 CAGCCACATGGCCAGAAGATGACATCTTCCGACAAGCTATTAGTCTTCTGATTGTAACAAA 1064796316 410870 NM_001396.4(DYRK1A):c.1546+1G>A DYRK1A Feb 10, 2017 MedGen:CN517202 not provided germline 21 37505590 GCACCACCTCCAGTACATCGTCAAGCTCAGGTCTGTGCTGCTGCGGTTAGATTAGGCTTGG 28937868 20723 NM_001169109.1(SCO2):c.398G>A (p.Cys133Tyr) SCO2 Mar 15, 2004 MedGen:C1858424,OMIM:604377,Orphanet:ORPHA1561 Cardioencephalomyopathy, fatal infantile, due to cytochrome c oxidase deficiency germline 22 50524014 GGGTGCTGATGTACTTTGGCTTCACTCACTGCCCTGACATCTGCCCAGACGAGCTGGAGAA 149898884 440104 NM_153717.2(EVC):c.1500G>A (p.Met500Ile) EVC Jun 01, 2017 MedGen:CN239258 Ellis-van Creveld Syndrome paternal 4 5756299 TCATGAGGTCCTGGAGAGGCAGAGGCTGATGCAGTGTGACCTGGAGGAAGAGGAGAATGTC 587784024 168496 NM_133433.3(NIPBL):c.6893G>A (p.Arg2298His) NIPBL Aug 28, 2017 MedGen:CN029798,OMIM:122470;MedGen:CN517202 Cornelia de Lange syndrome 1;not provided germline 5 37049240 AGGCATTTTTTCACACCCAGTCAAGTGTACGCCACTTTGCCCTAAATGTCATTGCATTGAC 879255702 247720 NM_014191.3(SCN8A):c.2668G>A (p.Ala890Thr) SCN8A Feb 19, 2016 MedGen:C3281191,OMIM:614558 Early infantile epileptic encephalopathy 13 germline 12 51765794 CTGGTGCTGGCCATTATTGTCTTCATCTTTGCCGTGGTGGGGATGCAACTCTTTGGAAAAA 72656338 413978 NM_000088.3(COL1A1):c.3655G>A (p.Asp1219Asn) COL1A1 - MedGen:C0268363,OMIM:166220,Orphanet:ORPHA216820,SNOMED CT:205497004 Osteogenesis imperfecta with normal sclerae, dominant form unknown 17 50186799 GCTCACGATGGTGGCCGCTACTACCGGGCTGATGATGCCAATGTGGTTCGTGACCGTGACC 72656356 457676 NM_000089.3(COL1A2):c.279G>A (p.Met93Ile) COL1A2 Jun 19, 2017 MedGen:C0268335,OMIM:130000,Orphanet:ORPHA287,SNOMED CT:20766005,SNOMED CT:83470009;MedGen:C0023931,OMIM:166200,SNOMED CT:385482004 Ehlers-Danlos syndrome, classic type;Osteogenesis imperfecta type I germline 7 94401620 AAAAGGAGTTGGACTTGGCCCTGGACCAATGGTATGCTTATCTGTTTATCTTAGCCAAAAA 724160001 172124 NM_153818.1(PEX10):c.992G>A (p.Arg331Gln) PEX10 Jan 12, 2015 MedGen:C3553948,OMIM:614871 Peroxisome biogenesis disorder 6B germline 1 2405815 CCTCTCCGCAGGCGGAGTGTCCCCTCTGCCGGGAGAAGTTCCCTCCCCAGAAGCTCATCTA 587777527 143259 NM_000982.3(RPL21):c.95G>A (p.Arg32Gln) RPL21 Jul 01, 2011 MedGen:C4014563,OMIM:615885 Hypotrichosis 12 germline 13 27254247 TAGGAGTTGTTCCTTTGGCCACATATATGCGAATCTATAAGAAAGGTGATATTGTAGACAT 80358279 21288 NM_004700.3(KCNQ4):c.886G>A (p.Gly296Ser) KCNQ4 Feb 17, 2011 MedGen:C2677637,OMIM:600101 DFNA 2 Nonsyndromic Hearing Loss germline 1 40819926 TATGGTGACAAGACACCGCACACATGGCTGGGCAGGGTCCTGGCTGCTGGCTTCGCCTTAC 1064792869 224764 NM_001257989.1(TYMP):c.715G>A (p.Ala239Thr) TYMP Jan 14, 2016 MedGen:C0872218,OMIM:603041,Orphanet:ORPHA298 Mitochondrial DNA depletion syndrome 1 (MNGIE type) germline 22 50527215 GCTCTGGTGGTGGACGTTAAGTTCGGAGGGGCCGCCGTCTTCCCCAACCAGGAGCAGGCCC 121917845 23146 NM_006261.4(PROP1):c.582G>A (p.Trp194Ter) PROP1 Jun 14, 2016 MedGen:C0878683,OMIM:262600 Pituitary hormone deficiency, combined 2 germline;unknown 5 177992808 CTTTGCTTTGTCACACCAGTCTGAGGACTGGTACCCTACCTTGCACCCAGCCCCTGCCGGC 557052809 170988 NM_152296.4(ATP1A3):c.2263G>A (p.Gly755Ser) ATP1A3 May 04, 2014 MedGen:C3553788,OMIM:614820 Alternating hemiplegia of childhood 2 de novo 19 41975629 TTTGCCTCCATCGTCACAGGGGTGGAGGAGGGTGAGTTGGCCAGGGGTGGCCCTGGAGACC 5030855 15646 NM_000277.2(PAH):c.1066-11G>A PAH Oct 20, 2017 MedGen:C0031485,OMIM:261600,Orphanet:ORPHA716,SNOMED CT:154735006;MedGen:CN517202 Phenylketonuria;not provided germline;unknown 12 102843790 TGATTTAACAGTGATAATAACTTTTCACTTGGGGCCTACAGTACTGCTTATCAGAGAAGCC 876657731 228337 NM_206933.2(USH2A):c.5776+1G>A USH2A Feb 06, 2017 MedGen:C1848634,OMIM:276901;MedGen:CN517202 Usher syndrome, type 2A;not provided germline 1 216073096 TTTACGAGGGTGGTCTCCAGCCTTTTACAGGTAATGTGGAGGTCCTCTAAATTAAATGTTA -1 442109 NM_000435.2(NOTCH3):c.3296G>A (p.Cys1099Tyr) NOTCH3 Jun 12, 2015 MedGen:CN517202 not provided germline 19 15180103 TGGCCCAGCCCTGCCAGCATGGGGGGACCTGCCGTGGCTATATGGGGGGCTACATGTGTGA 397515402 48192 NM_020822.2(KCNT1):c.1283G>A (p.Arg428Gln) KCNT1 Oct 26, 2016 MedGen:C3554195,OMIM:614959;MedGen:C3554306,OMIM:615005;MedGen:CN517202 Early infantile epileptic encephalopathy 14;Epilepsy, nocturnal frontal lobe, 5;not provided germline 9 135765706 GAGTCCTGCAGATCCCTCTGTGGTCCCAGCGGGTCATCTACCTCCAGGGCTCTGCACTCAA 587779568 107025 NM_000090.3(COL3A1):c.3039+5G>A (p.Asp1013_Gly1014insVNSSFYSTSQ) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189005462 GTACAGCTGGTGAACCTGGAAGAGATGTGAGTAGCAGTTTTTATTCAACCAGCCAGGTAGA 774528745 264095 NM_181457.3(PAX3):c.812G>A (p.Arg271His) PAX3 Sep 07, 2016 MedGen:CN517202 not provided germline 2 222221368 TAAATCCATAGGTCTGGTTTAGCAACCGCCGTGCAAGATGGAGGAAGCAAGCTGGGGCCAA 267606818 31298 NM_182925.4(FLT4):c.2569G>A (p.Gly857Arg) FLT4 Jun 01, 2000 MedGen:C1704423,OMIM:153100,Orphanet:ORPHA79452,SNOMED CT:399889006 Hereditary lymphedema type I germline 5 180619743 ACAGGGAGAGTGCTCGGCTACGGCGCCTTCGGGAAGGTGGTGGAAGCCTCCGCTTTCGGCA 80358079 70118 NM_007294.3(BRCA1):c.5194-12G>A BRCA1 Jul 25, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome germline 17 43057147 CTCTTTCTCTTATCCTGATGGGTTGTGTTTGGTTTCTTTCAGCATGATTTTGAAGTCAGAG 377015931 176480 NM_016239.3(MYO15A):c.8714-1G>A MYO15A Mar 07, 2016 MedGen:C1838263,OMIM:600316;MedGen:CN043648,Orphanet:ORPHA87884 Deafness, autosomal recessive 3;Nonsyndromic hearing loss and deafness germline;paternal 17 18157155 TGGCAGATGCTGACCCGAGCCTGGCCCATAGGCTACAGTGCTGGCTGCGTGGTTCGCAGGA 863223409 210223 NM_000020.2(ACVRL1):c.152G>A (p.Cys51Tyr) ACVRL1 Apr 14, 2015 MedGen:CN517202 not provided germline 12 51913189 GCAAGGGGCCTACCTGCCGGGGGGCCTGGTGCACAGTAGTGCTGGTGCGGGAGGAGGGGAG 1114167415 424604 NM_000089.3(COL1A2):c.3089G>A (p.Gly1030Asp) COL1A2 - MedGen:C0268363,OMIM:166220,Orphanet:ORPHA216820,SNOMED CT:205497004 Osteogenesis imperfecta with normal sclerae, dominant form unknown 7 94426514 CTGGCTTAAAGGGACACAATGGATTGCAAGGTCTGCCTGGTATCGCTGTAAGTAAACTGTA 193922423 44442 NM_000388.3(CASR):c.1525G>A (p.Gly509Arg) CASR Aug 18, 2011 MedGen:C0342637,Orphanet:ORPHA405,SNOMED CT:190868007 Familial hypocalciuric hypercalcemia germline 3 122275959 GAGGATGGCTCCATCGTGTTTAAGGAAGTCGGGTATTACAACGTCTATGCCAAGAAGGGAG 121912935 32211 NM_001848.2(COL6A1):c.1022G>A (p.Gly341Asp) COL6A1 Feb 26, 2002 MedGen:CN029274,OMIM:158810 Bethlem myopathy 1 germline 21 45990792 CCTCTTTCCAGGGGGAGATGGGGTACCCAGGCCTGCCAGGCTGCAAGGGCTCGCCCGGGTT 74315355 17443 NM_032409.2(PINK1):c.926G>A (p.Gly309Asp) PINK1 Sep 26, 2017 MedGen:C1853833,OMIM:605909 Parkinson disease 6, autosomal recessive early-onset germline 1 20644639 TGCCCTCACGCCTCCACCCTGAAGGCCTGGGCCATGGCCGGACGCTGTTCCTCGTTATGAA 62508730 108540 NM_000277.2(PAH):c.722G>A (p.Arg241His) PAH Nov 06, 2017 MedGen:C0031485,OMIM:261600,Orphanet:ORPHA716,SNOMED CT:154735006;MedGen:CN517202 Phenylketonuria;not provided germline;unknown 12 102852935 TTCTTTTCATCCCAGCTTGCACTGGTTTCCGCCTCCGACCTGTGGCTGGCCTGCTTTCCTC 45517404 59105 NM_000548.4(TSC2):c.5161-1G>A TSC2 Oct 17, 2016 MedGen:C1860707,OMIM:613254;MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000 Tuberous sclerosis 2;Tuberous sclerosis syndrome germline 16 2088226 TAGTGAGCTCACCCCCTGCCTACGTCCCCAGATGGCCTCACAGGTGCATCATAGCCGCTCC 587777437 139391 NM_000890.4(KCNJ5):c.452G>A (p.Gly151Glu) KCNJ5 Feb 14, 2012 MedGen:C3150933,OMIM:613677,Orphanet:ORPHA251274 Familial hyperaldosteronism type 3 germline 11 128911725 TGTTCTCCATTGAGACCGAAACAACCATTGGGTATGGCTTCCGAGTCATCACAGAGAAGTG 121908764 22251 NM_000492.3(CFTR):c.3611G>A (p.Trp1204Ter) CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline;unknown 7 117627664 AGAATTCACACGTGAAGAAAGATGACATCTGGCCCTCAGGGGGCCAAATGACTGTCAAAGA 121434395 21195 NM_004621.5(TRPC6):c.2689G>A (p.Glu897Lys) TRPC6 Jul 01, 2005 MedGen:C1858915,OMIM:603965 Focal segmental glomerulosclerosis 2 germline 11 101453062 ATTAAGCAGGACATCTCAAGTCTCCGCTATGAACTCCTTGAAGAAAAATCTCAGAATACAG -1 481353 NM_001844.4(COL2A1):c.1979G>A (p.Gly660Glu) COL2A1 Oct 12, 2017 MedGen:C0220685,OMIM:200610,Orphanet:ORPHA93296 Achondrogenesis, type II de novo 12 47983699 CTGGTGAACGAGGCGAGCAGGGTGCTCCTGGGCCATCTGGGTTCCAGGTAGGTGGCTGGAC 267607220 20725 NM_002334.3(LRP4):c.1585G>A (p.Asp529Asn) LRP4 May 14, 2010 MedGen:C1859309,OMIM:212780,Orphanet:ORPHA3258 Syndactyly Cenani Lenz type germline 11 46893085 GATTGGGTCCATGACAAACTCTACTGGACCGACTCAGGCACCTCGAGGATTGAGGTGGCCA 587779641 107119 NM_000090.3(COL3A1):c.593G>A (p.Gly198Glu) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188988600 TTACATATTCTACTCACTAGGGATCTCCAGGATACCAAGGACCCCCTGGTGAACCTGGGCA 577442939 108190 NM_001040147.2(SERPINB7):c.455-1G>A SERPINB7 Oct 01, 2014 MedGen:C3810072,OMIM:615598,Orphanet:ORPHA140966 Palmoplantar keratoderma, nagashima type germline 18 63798603 AACATTTTTCCCTCAATTTTTTTTTCAAAAGGCAAAATCAAGAACGTGATTGGTGAAGGTG 80359205 67482 NM_000059.3(BRCA2):c.9317G>A (p.Trp3106Ter) BRCA2 Nov 01, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C0677776,Orphanet:ORPHA145 Breast-ovarian cancer, familial 2;Familial cancer of breast;Hereditary breast and ovarian cancer syndrome germline 13 32394749 AATGTTACAATTTACTGGCAATAAAGTTTTGGATAGACCTTAATGAGGACATTATTAAGCC 397508158 67858 NM_000492.3(CFTR):c.1116+1G>A CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline;unknown 7 117540347 GACTCTCTTGGAGCAATAAACAAAATACAGGTAATGTACCATAATGCTGCATTATATACTA -1 446699 NM_001111125.2(IQSEC2):c.2749+1G>A IQSEC2 Feb 12, 2016 MedGen:CN517202 not provided germline X 53246968 AACTAGATGACTTCATCAAGAACCTGAGAGGTGACTTCCCTGTCAGCTTTTCCTGCCCTTC 879254096 245181 NM_000166.5(GJB1):c.231G>A (p.Trp77Ter) GJB1 Mar 28, 2016 MedGen:CN517202 not provided germline X 71223938 ATTCTTCCCCATCTCCCATGTGCGGCTGTGGTCCCTGCAGCTCATCCTAGTTTCCACCCCA 587783544 169903 NM_178151.2(DCX):c.364G>A (p.Gly122Arg) DCX Feb 08, 2013 Human Phenotype Ontology:HP:0002282,MedGen:C0008519 Heterotopia germline X 111410035 AAGATCGGAAGCATGGATGAACTGGAGGAAGGTAATTTAAATAGTGGGTGGTGGCCGTTGG 397517904 244219 NM_170707.3(LMNA):c.513+1G>A LMNA Apr 21, 2015 MedGen:CN517202 not provided germline 1 156130774 CTGCATGATCTGCGGGGCCAGGTGGCCAAGGTGAGGCCACCCTGCAGGGCCCACCCATGGC 1057520779 371844 NM_000545.6(HNF1A):c.686G>A (p.Arg229Gln) HNF1A Jul 02, 2015 MedGen:CN517202 not provided germline 12 120993679 AGAGGCAGAAGAACCCTAGCAAGGAGGAGCGAGAGACGCTAGTGGAGGAGTGCAATAGGTA 587783810 169972 NM_000252.2(MTM1):c.231+1G>A MTM1 Feb 07, 2017 MedGen:C0410203,OMIM:310400,Orphanet:ORPHA596,SNOMED CT:46804001;MedGen:CN517202 Severe X-linked myotubular myopathy;not provided germline X 150598687 TATCGTCTTTATTTAAGAAGTTTGGAAACGGTAAGTAGAATATAAGACCATAAAGATGACC 1060502433 399870 NM_000059.3(BRCA2):c.7722G>A (p.Trp2574Ter) BRCA2 Aug 08, 2017 MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009 Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome germline 13 32357846 TGAAGATTATTTTGGTAAGGAAAGTTTATGGACTGGAAAAGGAATACAGTTGGCTGATGGT 794728589 196457 NM_170707.3(LMNA):c.356+1G>A LMNA Apr 24, 2016 MedGen:CN517202 not provided germline 1 156115275 GCGTGAGGAGTTTAAGGAGCTGAAAGCGCGGTGAGTTCGCCCAGGTGGCTGCGTGCCTGGC 587777808 17570 NM_144596.3(TTC8):c.624+1G>A TTC8 Jan 01, 2006 MedGen:C1859566,OMIM:615985 Bardet-Biedl syndrome 8 germline 14 88843851 ATCTTTCATCATGAAAATGATGTTAAGACTGTAAGTTTTGAATTCATGCTATTTTCTTTTA -1 433499 NM_004006.2(DMD):c.7899G>A (p.Trp2633Ter) DMD Sep 12, 2016 MedGen:CN169374 not specified germline X 31658118 ATAGCAGTTGGCCAAAGACCTCCGCCAGTGGCAGACAAATGTAGATGTGGCAAATGACTTG 1057519044 361713 NM_000141.4(FGFR2):c.1013G>A (p.Gly338Glu) FGFR2 Sep 17, 2016 Human Phenotype Ontology:HP:0004439,MeSH:D003394,MedGen:C0010273,OMIM:123500,SNOMED CT:28861008 Crouzon syndrome germline 10 121517390 ATATTCGGAATGTAACTTTTGAGGACGCTGGGGAATATACGTGCTTGGCGGGTAATTCTAT 199472751 67813 NM_000218.2(KCNQ1):c.949G>A (p.Asp317Asn) KCNQ1 Jun 23, 2017 MedGen:CN230736;MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MedGen:CN517202 Cardiovascular phenotype;Congenital long QT syndrome;not provided germline 11 2583462 CAGGTCACAGTCACCACCATCGGCTATGGGGACAAGGTGCCCCAGACGTGGGTCGGGAAGA 748634900 183426 NM_000051.3(ATM):c.8293G>A (p.Gly2765Ser) ATM Apr 06, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0027672,SNOMED CT:699346009 Ataxia-telangiectasia syndrome;Hereditary cancer-predisposing syndrome germline 11 108343246 CTCCAGGTGGTTCCCCTCTCTCAGCGAAGTGGTGTTCTTGAATGGTGCACAGGAACTGTCC 766952056 408769 NM_025114.3(CEP290):c.3461+1G>A CEP290 Sep 22, 2017 MedGen:CN517202 not provided germline 12 88092680 TGAAATGGAACTAAAAGTTGAAGTGTCAAAGTAAGTGCATATAAGCATTTTAGCCATTTGA 794727199 191974 NM_000321.2(RB1):c.1696-1G>A RB1 Jan 07, 2015 Human Phenotype Ontology:HP:0009919,MeSH:D012175,MedGen:C0035335,OMIM:180200,Orphanet:ORPHA790 Retinoblastoma germline 13 48452992 TGTGGTTTTAATTTCATCATGTTTCATATAGGATTCACCTTTATTTGATCTTATTAAACAA 863225081 214562 NM_006245.3(PPP2R5D):c.589G>A (p.Glu197Lys) PPP2R5D Oct 17, 2015 MedGen:CN517202 not provided germline 6 43007262 TCGAATCCCACAGGGGCTGAGTTTGACCCAGAGGAAGATGAGCCCACCCTGGAAGCTGCTT 118192115 76848 NM_000540.2(RYR1):c.644G>A (p.Gly215Glu) RYR1 May 11, 2010 MedGen:C0751951,OMIM:117000,Orphanet:ORPHA597,SNOMED CT:43152001;MedGen:CN517202 Central core disease;not provided unknown 19 38446484 TCCCTTGCTCCTCTCCAGGCTTCGTGACGGGAGGTCACGTCCTCCGCCTCTTTCATGGACA 1006246556 414360 NM_001204.6(BMPR2):c.2588G>A (p.Ser863Asn) BMPR2 - MedGen:C0152171,OMIM:178600,SNOMED CT:26174007 Primary pulmonary hypertension germline 2 202556253 GTGAGGACACCCGGCTGAATATTAATTCCAGTCCTGATGAGCATGAGCCTTTACTGAGACG 121913529 27621 NM_004985.4(KRAS):c.35G>A (p.Gly12Asp) KRAS Mar 06, 2018 Human Phenotype Ontology:HP:0004808,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:ORPHA519,SNOMED CT:17788007;MeSH:C562463,MedGen:C0235974,OMIM:260350,Orphanet:ORPHA217074,SNOMED CT:372142002;Human Phenotype Ontology:HP:0002408,MedGen:C0917804,OMIM:108010,SNOMED CT:234142008;MeSH:D015179,MedGen:CN236642;Human Phenotype Ontology:HP:0010816,MedGen:C0334082,OMIM:162900,Orphanet:ORPHA35125,SNOMED CT:25201003;MedGen:C0265318,OMIM:163200,SNOMED CT:239112008;Human Phenotype Ontology:HP:0012209,MedGen:C0349639,OMIM:607785,Orphanet:ORPHA86834;MedGen:C0684249,OMIM:211980,SNOMED CT:187875007;Gene:6765,Human Phenotype Ontology:HP:0100615,MedGen:C0919267,OMIM:167000,SNOMED CT:123843001;Human Phenotype Ontology:HP:0006753,MeSH:D013274,MedGen:C0038356,OMIM:613659,SNOMED CT:126824007;Human Phenotype Ontology:HP:0100031,MeSH:D013964,MedGen:C0040136,Orphanet:ORPHA100087;MedGen:C0853032;Human Phenotype Ontology:HP:0030358,MeSH:D002289,MedGen:C0007131,SNOMED CT:254637007;MeSH:D010051,MedGen:CN236629;MedGen:C2674723,OMIM:614470,Orphanet:ORPHA268114;MedGen:CN166718,Orphanet:ORPHA98733;MedGen:CN517202 Acute myeloid leukemia;Carcinoma of pancreas;Cerebral arteriovenous malformation;Colorectal Neoplasms;Epidermal nevus;Epidermal nevus syndrome;Juvenile myelomonocytic leukemia;Lung cancer;Neoplasm of ovary;Neoplasm of stomach;Neoplasm of the thyroid gland;Nevus sebaceous;Non-small cell lung cancer;Ovarian Neoplasms;RAS-associated autoimmune leukoproliferative disorder;Rasopathy;not provided germline;somatic 12 25245350 CTGAATATAAACTTGTGGTAGTTGGAGCTGGTGGCGTAGGCAAGAGTGCCTTGACGATACA 1064793885 407293 NM_014112.4(TRPS1):c.2421G>A (p.Trp807Ter) TRPS1 Aug 13, 2015 MedGen:CN517202 not provided germline 8 115587280 TTCCAGTGATGACCTTCGCAATGTGACTTGGAGAGGGGCAGACATCCTGCGGGGGAGTCCG 60687604 22650 NM_001320198.1(KRT86):c.1204G>A (p.Glu402Lys) KRT86 Jan 01, 2009 MedGen:C0546966,OMIM:158000,Orphanet:ORPHA573,SNOMED CT:69488000;MedGen:CN517202 Beaded hair;not provided germline 12 52306237 GTGATGAACTCCAAGCTGGGCCTGGACATCGAGATCGCCACCTACAGGCGCCTGCTGGAGG 1057520620 368570 NM_022455.4(NSD1):c.6010-1G>A NSD1 Apr 21, 2015 MedGen:CN517202 not provided germline 5 177283786 GTCTGATGTGTAGCTTCTTTTGGAATTCTAGGACCGAATCATTGATGCTGGTCCCAAAGGA 121908112 19229 NM_018972.2(GDAP1):c.92G>A (p.Trp31Ter) GDAP1 Jan 01, 2002 MedGen:C1859198,OMIM:214400,Orphanet:ORPHA99948 Charcot-Marie-Tooth disease, type 4A germline 8 74350553 ACGCGGAGGTTAAGCTCATTCTGTACCATTGGACGCATTCCTTCAGCTCTCAAAAGGTACA 387906624 38653 NM_000138.4(FBN1):c.5182G>A (p.Ala1728Thr) FBN1 Jan 04, 2018 MedGen:C0265287,OMIM:102370,Orphanet:ORPHA969,SNOMED CT:254090007;MedGen:C3280054,OMIM:614185 Acromicric dysplasia;Geleophysic dysplasia 2 germline 15 48463124 ATGTGCTGCTGTTCCTACAACATTGGCCGGGCGTGGAACAAGCCCTGTGAACAGTGTCCCA 781194178 214862 NM_016218.3(POLK):c.1692G>A (p.Lys564=) POLK Mar 05, 2014 Human Phenotype Ontology:HP:0012125,MedGen:C0376358,OMIM:176807,SNOMED CT:399068003 Malignant tumor of prostate somatic 5 75596385 GTTTGTAAAACCTCTAGAAATGTCTCATAAGAAGAGTTTCTTTGATAAAAAACGATCAGAA 879255509 17934 NM_000419.4(ITGA2B):c.1544+1G>A ITGA2B Sep 01, 2011 MedGen:C0040015,OMIM:273800,Orphanet:ORPHA849,SNOMED CT:32942005 Glanzmann thrombasthenia germline 17 44380385 CCTACCTCAGACCAAGACACCCGTGAGCTGGTGAGGAGGCAGAGGGCATGGGCCTTAAAGG 398123107 98233 NM_000033.3(ABCD1):c.1802G>A (p.Trp601Ter) ABCD1 Jul 07, 2014 MedGen:C0162309,OMIM:300100,Orphanet:ORPHA43,SNOMED CT:65389002 Adrenoleukodystrophy germline X 153743008 CCCGCCTAGGTTGGGAGGCTATGTGTGACTGGAAGGACGTCCTGTCGGGTGGCGAGAAGCA 587778850 132315 NM_000321.2(RB1):c.2520+1G>A RB1 Sep 16, 2013 Human Phenotype Ontology:HP:0009919,MeSH:D012175,MedGen:C0035335,OMIM:180200,Orphanet:ORPHA790 Retinoblastoma somatic 13 48473391 ATCTTAGTATCAATTGGTGAATCATTCGGGGTGAGTATTTTCTTTCTATGAAATATAATAG 786204242 186159 NM_130799.2(MEN1):c.3G>A (p.Met1Ile) MEN1 Sep 07, 2016 MeSH:D018761,MedGen:C0025267,OMIM:131100,Orphanet:ORPHA652,SNOMED CT:30664006 Multiple endocrine neoplasia, type 1 germline;unknown 11 64810107 TGCAGGCCGCCGCCCACCGCCCGCCGCCATGGGGCTGAAGGCCGCCCAGAAGACGCTGTTC 121913349 359643 NM_004333.4(BRAF):c.1390G>A (p.Gly464Arg) BRAF Sep 24, 2015 Human Phenotype Ontology:HP:0002861,MeSH:D008545,MedGen:C0025202,SNOMED CT:2092003;MedGen:CN517202 Malignant melanoma;not provided germline;somatic 7 140781618 GATGGGCAGATTACAGTGGGACAAAGAATTGGATCTGGATCATTTGGAACAGTCTACAAGG 132630299 26105 NM_001015877.1(PHF6):c.134G>A (p.Cys45Tyr) PHF6 Dec 01, 2002 MedGen:C0265339,OMIM:301900,SNOMED CT:21634003 Borjeson-Forssman-Lehmann syndrome germline X 134377751 AAAACCAGAAGGTGGCAGCGCACCATAAGTGCATGGTAAGTATACCGGCAGCAACAGAGAC 74315511 20720 NM_005138.2(SCO2):c.418G>A (p.Glu140Lys) SCO2 Sep 08, 2017 MedGen:C1858424,OMIM:604377,Orphanet:ORPHA1561;MedGen:C1837148,OMIM:608908;MedGen:CN517202 Cardioencephalomyopathy, fatal infantile, due to cytochrome c oxidase deficiency;Myopia 6;not provided germline;inherited 22 50523994 TTCACTCACTGCCCTGACATCTGCCCAGACGAGCTGGAGAAGCTGGTGCAGGTGGTGCGGC 121912586 17476 NM_001173464.1(KIF21A):c.2861G>A (p.Arg954Gln) KIF21A Mar 01, 2008 MedGen:C1851102,OMIM:135700;MedGen:C2751105 Fibrosis of extraocular muscles, congenital, 1;Fibrosis of extraocular muscles, congenital, 3b germline 12 39332404 TAAAATCCAACCTGCTTTCTCAATAGCAACGGGAGGAACTCACAAAAAGACGAGAGAAACT 62641229 362314 NM_017929.5(PEX26):c.296G>A (p.Trp99Ter) PEX26 Feb 07, 2017 MedGen:C3539168,OMIM:614872 Peroxisome biogenesis disorder 7A germline 22 18079939 GGATCCAGGCCCTGGCAGAAATGGATCGGTGGCAAGAAGTCCTCTCCTGGGTCCTTCAGTA 121434635 24119 NM_024420.2(PLA2G4A):c.1454G>A (p.Arg485His) PLA2G4A Jun 01, 2008 MedGen:C4016672 Phospholipase a2, group IV a, deficiency of germline 1 186956219 ATTCAGCTTTATTCAATACCAGAGAAGGACGTGCTGGGAAGGTACACAACTTCATGCTGGG 398122919 48449 NM_001170961.1(IGSF1):c.2931G>A (p.Trp977Ter) IGSF1 Dec 01, 2012 MedGen:C3550963,OMIM:300888,Orphanet:ORPHA329235 Hypothyroidism, central, and testicular enlargement germline X 131275746 TCTCTTTCTAGACACATTCCCTAAGCCATGGTTGTTTGCTGAGCCCAGTTCTGTGGTTCCC 80358044 69923 NM_007294.3(BRCA1):c.4675+1G>A BRCA1 Jul 10, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;Human Phenotype Ontology:HP:0100013,MeSH:D001943,MedGen:C1458155,Orphanet:ORPHA180250,SNOMED CT:126926005;MedGen:CN517202 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;Neoplasm of the breast;not provided germline 17 43074330 AAACATCTTACTTGCCAAGGCAAGATCTAGGTAATATTTCATCTGCTGTATTGGAACAAAC 121434229 18460 NM_006147.3(IRF6):c.134G>A (p.Arg45Gln) IRF6 Jan 01, 2003 MedGen:C0175697,OMIM:119300,SNOMED CT:79261008 Van der Woude syndrome germline 1 209801280 GCTTCCAGATTCCCTGGAAACATGCCACCCGGCATAGCCCTCAACAAGAAGAGGAAAATAC 776172237 425486 NM_000183.2(HADHB):c.254+1G>A HADHB May 30, 2017 MedGen:CN517202 not provided germline 2 26269998 GCCACATGATTTGGCTAGAGCAGCGCTTACGTAAGTAAATGCAGTTTCATTTCCGTTCTTA 80356702 32581 NM_000083.2(CLCN1):c.950G>A (p.Arg317Gln) CLCN1 Nov 04, 2016 MedGen:C2936781,OMIM:160800,SNOMED CT:57938005;MedGen:C0751360,OMIM:255700,SNOMED CT:20305008;MedGen:C0027127,Orphanet:ORPHA206973;MedGen:CN517202 Congenital myotonia, autosomal dominant form;Congenital myotonia, autosomal recessive form;Myotonia congenita;not provided germline 7 143330868 TTGCAGCCACGTTCAGCGCCTTTGTGTTTCGAGTGCTGGCAGTGTGGAACAAGGATGCTGG 28929495 31651 NM_005228.4(EGFR):c.2155G>A (p.Gly719Ser) EGFR Mar 10, 2016 MeSH:D015179,MedGen:CN236642;Human Phenotype Ontology:HP:0030358,MeSH:D002289,MedGen:C0007131,SNOMED CT:254637007;MedGen:C4016032;MedGen:CN225347 Colorectal Neoplasms;Non-small cell lung cancer;Nonsmall cell lung cancer, response to tyrosine kinase inhibitor in, somatic;Tyrosine kinase inhibitor response somatic 7 55174014 GAAACTGAATTCAAAAAGATCAAAGTGCTGGGCTCCGGTGCGTTCGGCACGGTGTATAAGG 199474671 24593 m.5549G>A MT-TW Mar 01, 1995 Human Phenotype Ontology:HP:0006789,MedGen:C1852373 Encephalopathy, mitochondrial germline MT 5549 TAGGTTAAATACAGACCAAGAGCCTTCAAAGCCCTCAGTAAGTTGCAATACTTAATTTCTG 797044973 204604 NM_000143.3(FH):c.905-1G>A FH Feb 01, 2016 MedGen:C0027672,SNOMED CT:699346009;Human Phenotype Ontology:HP:0007437,MedGen:C1708350,OMIM:150800,Orphanet:ORPHA523 Hereditary cancer-predisposing syndrome;Multiple cutaneous leiomyomas germline 1 241504246 CACCCATCTAGGATATTTTTCTTTTCTTTAGGCTTGCCTTTTGTCACTGCTCCGAATAAAT 1135401748 424704 NM_002047.3(GARS):c.929G>A (p.Arg310Gln) GARS - na GARS-associated growth retardation and developmental delay germline;not applicable 7 30612143 CTGCACAGGGGATTTTCTTGAATTTCAAACGACTTTTGGAGTTCAACCAAGGAAAGTTGCC -1 464311 NM_000138.4(FBN1):c.7112G>A (p.Trp2371Ter) FBN1 Jan 27, 2017 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:CN118826,Orphanet:ORPHA91387 Marfan syndrome;Thoracic aortic aneurysm and aortic dissection germline 15 48427659 CGGAATGCTGCTGTGACGGAGGGAGAGGCTGGGGTCCCCACTGTGAGATCTGCCCTTTCCA -1 482128 NM_000267.3(NF1):c.5943+1G>A NF1 Nov 08, 2017 MedGen:CN517202 not provided germline 17 31335032 CAAGCAAAAATATGGGGAAGCCTTGGGCAGGTATTGAGTTTGCTCAAATATTTATCTAGTA 1057517825 360483 NM_003073.4(SMARCB1):c.1121G>A (p.Arg374Gln) SMARCB1 Mar 17, 2016 MedGen:CN517202 not provided germline 22 23834143 CTCATTGCCCTCCCCACTCCTCTTCCAGGCGGATGAGGCGTCTTGCCAACACGGCCCCGGC 797044959 205237 NM_001615.3(ACTG2):c.770G>A (p.Arg257His) ACTG2 May 02, 2015 MedGen:C0238062,Orphanet:ORPHA2978;MeSH:D030342,MedGen:C0950123;Human Phenotype Ontology:HP:0000021,MedGen:C1855311 Chronic intestinal pseudoobstruction;Inborn genetic diseases;Megacystis germline 2 73914836 AGGTTATCACCATTGGCAATGAGCGCTTCCGCTGCCCTGAGACCCTCTTCCAGCCTTCCTT 33943001 30485 NM_000518.4(HBB):c.93-1G>A HBB Jun 30, 2017 MedGen:C0005283,OMIM:613985,Orphanet:ORPHA848,SNOMED CT:65959000;MedGen:C0271980,SNOMED CT:86715000;MedGen:CN517202 beta Thalassemia;beta^0^ Thalassemia;not provided germline 11 5226800 TCTGCCTATTGGTCTATTTTCCCACCCTTAGGCTGCTGGTGGTCTACCCTTGGACCCAGAG 119103285 17229 NM_207352.3(CYP4V2):c.181G>A (p.Gly61Ser) CYP4V2 Apr 12, 2012 MedGen:C1859486,OMIM:210370,Orphanet:ORPHA41751 Bietti crystalline corneoretinal dystrophy germline 4 186192004 CCCACGGTGGCCCGCGCCTACCCACTGGTGGGCCACGCGCTGCTGATGAAGCCGGACGGGC 281874673 35773 NM_000495.4(COL4A5):c.1643G>A (p.Gly548Asp) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108597432 CAGGCTTTCCTGGATCTAAAGGTGAACCTGGTGATATCCTCACTTTTCCAGGAATGAAGGG 794727620 194287 NM_000282.3(PCCA):c.232-1G>A PCCA Dec 02, 2014 Human Phenotype Ontology:HP:0003353,MedGen:C0268579,OMIM:606054,Orphanet:ORPHA35 Propionic acidemia germline 13 100111992 TATTAATAGACATTAATATATTTTAAAATAGGTTATTAGAACTTGCAAGAAGATGGGCATT 36211715 29159 NM_000257.3(MYH7):c.2609G>A (p.Arg870His) MYH7 Aug 22, 2017 MedGen:C3495498,OMIM:192600;Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Familial hypertrophic cardiomyopathy 1;Hypertrophic cardiomyopathy;Primary familial hypertrophic cardiomyopathy;not provided germline 14 23424839 AAGAGGCGCTAGAGAAGTCCGAGGCTCGCCGCAAGGAGCTGGAGGAGAAGATGGTGTCCCT 121918298 17750 NM_178443.2(FERMT3):c.687G>A (p.Trp229Ter) FERMT3 May 07, 2009 MedGen:C2748536,OMIM:612840,Orphanet:ORPHA99844 Leukocyte adhesion deficiency, type III germline 11 64211648 CTGACTGCTGCTTCTGCCGCGGCCCAGGTGGCTGGACTCGTCGCGGTGTCTCATGCAGCAG 747169620 441232 NM_000349.2(STAR):c.505G>A (p.Glu169Lys) STAR Feb 01, 2017 MedGen:CN517202 not provided germline 8 38146108 AAGATCGGAAAAGATACATTCATTACTCACGAGCTGGCTGCCGAGGCAGCAGGAAACCTGG 121908675 21255 NM_004737.5(LARGE1):c.1525G>A (p.Glu509Lys) LARGE1 Nov 01, 2008 MedGen:C1837229,OMIM:608840 Congenital muscular dystrophy-dystroglycanopathy with mental retardation, type B6 germline 22 33304434 ATCAGCCTGGCCCTCTACCTGTCAGACGCCGAGGCCCAGCAGTTCCTCCGCTACGCACAGG 1057518269 359283 NM_018136.4(ASPM):c.2409G>A (p.Trp803Ter) ASPM Nov 16, 2016 MedGen:CN517202 not provided germline 1 197133360 GTTAATTGTTCGAAAAGATAGACACCTATGGAAAGATGTGGGTAAGAAGACTGCAGAAATC 72654797 32337 NM_000088.3(COL1A1):c.3182G>A (p.Gly1061Asp) COL1A1 Mar 01, 1990 MedGen:C0268360,OMIM:166210,SNOMED CT:86470003 Osteogenesis imperfecta, recessive perinatal lethal unknown 17 50188555 CTGGTGCCCCTGGCCCCGTTGGCCCTGCTGGCAAGAGTGGTGATCGTGGTGAGACTGTAAG 672601342 167419 NM_015559.2(SETBP1):c.1596G>A (p.Trp532Ter) SETBP1 Oct 01, 2014 MedGen:C4015141,OMIM:616078 Mental retardation, autosomal dominant 29 germline 18 44950936 GCATCCAAAATTTGCTGCAAAACGAAGGTGGACTTGCAGCAAACCAAAACCTAGCACCATG 121912910 32301 NM_000089.3(COL1A2):c.1504G>A (p.Gly502Ser) COL1A2 Nov 01, 1994 MedGen:C0268360,OMIM:166210,SNOMED CT:86470003 Osteogenesis imperfecta, recessive perinatal lethal germline 7 94413083 TCTTTGTTTTGTTTTTCATTTTTACTCTAGGGTGATCCTGGCAAAAACGGTGATAAAGGTC 375916159 389246 NM_004452.3(ESRRB):c.787G>A (p.Gly263Ser) ESRRB Jun 04, 2016 MedGen:C1837857,OMIM:608565 Deafness, autosomal recessive 35 germline 14 76482759 GTCATCATTGGCTGGGCCAAGCACATCCCAGGTGAGCATGTGGGACCAGGGGAGAGTGTGG 515726176 136313 NM_000098.2(CPT2):c.1145G>A (p.Arg382Lys) CPT2 May 15, 2014 MedGen:C0342790,Orphanet:ORPHA157,SNOMED CT:238002005 Carnitine palmitoyltransferase II deficiency germline 1 53210819 ACTCTTGGGGTGATGGTGTGGCAGTGCTCAGATTTTTTAATGAAGTATTTAAAGACAGCAC 794727840 195567 NM_000203.4(IDUA):c.972+1G>A IDUA Nov 21, 2014 Human Phenotype Ontology:HP:0000943,MedGen:C0086795,OMIM:607014,Orphanet:ORPHA93473 Hurler syndrome germline 4 1002162 GACGTGACCTACGCGGCCATGGTGGTGAAGGTGGGCCGGCCCAACGCCCTGCGCGCCCCCC 80358076 184933 NM_007294.3(BRCA1):c.4185+1G>A BRCA1 Sep 12, 2014 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 17 43090943 TCCTCTCAGAGTGACATTTTAACCACTCAGGTAAAAAGCGTGTGTGTGTGTGCACATGCGT 199472895 78070 NM_000238.3(KCNH2):c.1264G>A (p.Ala422Thr) KCNH2 Jul 31, 2012 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MedGen:CN517202 Congenital long QT syndrome;not provided germline 7 150952718 TGGCTCATCCTGCTGCTGGTCATCTACACGGCTGTCTTCACACCCTACTCGGCTGCCTTCC 398124032 100643 NM_004006.2(DMD):c.649+1G>A DMD Apr 22, 2013 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009;MedGen:C3668940,OMIM:302045;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Becker muscular dystrophy;Dilated cardiomyopathy 3B;Duchenne muscular dystrophy germline X 32809492 TAGGCATAGAGAAACTACTCGATCCTGAAGGTTGGTAAATTTCTGGACTACCACTGCTTTT 147649016 269651 NM_003742.2(ABCB11):c.908+1G>A ABCB11 Jan 15, 2016 MedGen:C2608083,OMIM:605479,Orphanet:ORPHA99961;MedGen:C1866138,OMIM:601847 Benign recurrent intrahepatic cholestasis 2;Progressive familial intrahepatic cholestasis 2 germline 2 168990800 TTTTGGTGGTGAGAAAAGAGAGGTTGAAAGGTTGGTTAATTGGAATCTGATTCTTTCCTTA 863223719 209863 NM_002890.2(RASA1):c.2690+1G>A RASA1 Feb 18, 2015 MedGen:CN517202 not provided germline 5 87380596 AAATACCACCATGAGAACAAGAGTTGTTAGGTAAGGCTCATCAATTGATTTGTTAAATCAC 104893632 23197 NM_080916.2(DGUOK):c.679G>A (p.Glu227Lys) DGUOK Sep 01, 2002 MedGen:C3151513,OMIM:251880,Orphanet:ORPHA279934 Mitochondrial DNA-depletion syndrome 3, hepatocerebral germline 2 73957212 GCCTATCTAGAGCAGCTGCATGGCCAACACGAAGCCTGGCTTATTCACAAGACAACGAAGT 104894453 29027 NM_000270.3(PNP):c.265G>A (p.Glu89Lys) PNP Feb 15, 1987 MedGen:C0268125,OMIM:613179,Orphanet:ORPHA760,SNOMED CT:60743005 Purine-nucleoside phosphorylase deficiency germline 14 20474555 GTGATGATGCAGGGCAGGTTCCACATGTATGAAGGGTACCCACTCTGGAAGGTAAGTCAGA 200118797 49670 NM_007055.3(POLR3A):c.3014G>A (p.Arg1005His) POLR3A Aug 02, 2012 MedGen:C1843200,OMIM:607694 Hypomyelinating leukodystrophy 7 not provided 10 77985960 CCCAGCCCCGTGTGCTGTACCAGCTGGACCGCATCACCCCCACCCAAGTAGAAAAGTTTCT 587784214 168288 NM_022455.4(NSD1):c.6656G>A (p.Arg2219His) NSD1 Feb 08, 2013 MedGen:CN035106,OMIM:117550 Sotos syndrome 1 germline 5 177294024 GGCCCAATCCTCTGGAACCTGGGGAGATCCGTGAGTATGTGCCTCCCCCAGTACCGCTGCC 193922802 136929 NM_000540.2(RYR1):c.7048G>A (p.Ala2350Thr) RYR1 Jun 01, 2014 MedGen:CN031421,OMIM:145600;MedGen:CN517202 Malignant hyperthermia, susceptibility to, 1;not provided germline;unknown 19 38499655 GGGTGGCCAGGCGAGAGCGTGGAGGAGAACGCCAATGTGGTGGTGCGGCTGCTCATCCGGA 587777057 77012 NM_020988.2(GNAO1):c.607G>A (p.Gly203Arg) GNAO1 Nov 08, 2017 MedGen:C0393706,Orphanet:ORPHA1934;MedGen:C3809606,OMIM:615473;MedGen:CN517202 Early infantile epileptic encephalopathy;Early infantile epileptic encephalopathy 17;not provided de novo;germline 16 56336744 CTCCCTGCCTCCTACAGGCTGTTTGACGTCGGAGGCCAGCGATCTGAACGCAAGAAGTGGA 121918058 15107 NM_000374.4(UROD):c.499G>A (p.Glu167Lys) UROD Apr 01, 1991 MedGen:C0162569 Hepatoerythropoietic porphyria germline 1 45013933 CTCTAGTGGACCCTGATGACATACATGGTTGAGGGTGGTGGCTCAAGCACCATGGCTCAGG 587780399 135187 NM_004543.4(NEB):c.3567+1G>A NEB Mar 31, 2014 MedGen:CN187052 Nemaline myopathy 2, autosomal recessive germline 2 151677875 TCTAAGAACATGATGCAGATACAGAGTGATGTAAGTGTCATTTACTTCTCAAGAAACCCCC 587779650 107134 NM_000090.3(COL3A1):c.970G>A (p.Gly324Ser) COL3A1 Jul 28, 2017 MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000;MedGen:CN118826,Orphanet:ORPHA91387 Ehlers-Danlos syndrome, type 4;Thoracic aortic aneurysm and aortic dissection germline 2 188992202 TTCTCTTTTTAGGGTGCTCGGGGTAATGACGGTGCTCGAGGCAGTGATGGTCAACCAGTAA 1060503235 399785 NM_000020.2(ACVRL1):c.1217G>A (p.Trp406Ter) ACVRL1 Nov 26, 2016 MedGen:C1838163,OMIM:600376 Hereditary hemorrhagic telangiectasia type 2 germline 12 51916204 CTGACATCTGGGCCTTTGGCCTGGTGCTGTGGGAGATTGCCCGCCGGACCATCGTGAATGG 104894705 22720 NM_024407.4(NDUFS7):c.364G>A (p.Val122Met) NDUFS7 Sep 30, 2013 MedGen:C1838951;MedGen:CN517202 Leigh syndrome due to mitochondrial complex I deficiency;not provided germline 19 1391006 GCCAGCCCGCGCCAGTCCGACGTCATGATCGTGGCCGGCACACTCACCAACAAGATGGCCC 121909749 31097 NM_000824.4(GLRB):c.752G>A (p.Gly251Asp) GLRB Oct 04, 2012 MedGen:C3553291,OMIM:614619 Hyperekplexia 2 germline 4 157143807 TCATGCCTTGAATGTGTTTGCTTCTGAAAGGCTACTACACATGCGTGGAAGTCATCTTCAC 546102223 17637 NM_058172.5(ANTXR2):c.1179G>A (p.Glu393=) ANTXR2 Apr 01, 2012 MedGen:C2745948,OMIM:228600,SNOMED CT:238861002,SNOMED CT:238867003 Hyaline fibromatosis syndrome germline 4 79983878 TCGAGGGGTTGGAGGAATTAAAAGAATGGAGGTTGGTATCTTAAAAAAAAATAGAAGCTGC 878855118 242347 NM_024675.3(PALB2):c.3420G>A (p.Trp1140Ter) PALB2 Feb 23, 2016 MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006 Familial cancer of breast germline 16 23603600 AATCTTGACTTCTGGAACAATTGCCATTTGGGACTTACTTCTCGGTCAGTGTACTGCCCTC 61751009 150191 NM_005857.4(ZMPSTE24):c.1204-1G>A ZMPSTE24 May 26, 2015 MedGen:CN517202 not provided germline 1 40292444 GTGGCTAAAACCCTTTCATTTTCTTTTTCAGGTTCTTTCTTTTTGCCTAACAGTCCTAAGC 72654802 32361 NM_000088.3(COL1A1):c.3235G>A (p.Gly1079Ser) COL1A1 Jul 01, 1992 MedGen:C0023931,OMIM:166200,SNOMED CT:385482004 Osteogenesis imperfecta type I germline;maternal 17 50188122 CAGGGTCCTGCTGGTCCCGCCGGTCCTGTCGGCCCTGTTGGCGCCCGTGGCCCCGCCGTAA 1060501692 398313 NM_000051.3(ATM):c.4110-1G>A ATM Aug 16, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0027672,SNOMED CT:699346009 Ataxia-telangiectasia syndrome;Hereditary cancer-predisposing syndrome germline 11 108288976 ATGACTGTATTTTTTCCCTTAACTCTGTTAGGGATTTGGATCCTGCTCCTAATCCACCTCA 111033632 24269 NM_024408.3(NOTCH2):c.1331G>A (p.Cys444Tyr) NOTCH2 Jul 01, 2006 MedGen:C1857761,OMIM:610205,Orphanet:ORPHA261629 Alagille syndrome 2 germline 1 119967555 TGAACACGGATGGCGCCTTCCACTGTGAGTGTCTGAAGGGTTATGCAGGACCTCGTTGTGA 137852275 25686 NM_000133.3(F9):c.1070G>A (p.Gly357Glu) F9 Nov 26, 1991 MedGen:C0008533,OMIM:306900,Orphanet:ORPHA98879,SNOMED CT:41788008 Hereditary factor IX deficiency disease germline X 139561755 AATTTGGATCTGGCTATGTAAGTGGCTGGGGAAGAGTCTTCCACAAAGGGAGATCAGCTTT 121907978 18973 NM_000520.5(HEXA):c.1360G>A (p.Gly454Ser) HEXA Aug 05, 2013 MedGen:C0039373,OMIM:272800,Orphanet:ORPHA845,SNOMED CT:111385000 Tay-Sachs disease germline 15 72346296 GGTACCCCTGAGCAGAAGGCTCTGGTGATTGGTGGAGAGGCTTGTATGTGGGGAGAATATG 193302866 47619 NM_016938.4(EFEMP2):c.800G>A (p.Cys267Tyr) EFEMP2 May 12, 2011 MedGen:C3280798,OMIM:614437;MedGen:CN033664,OMIM:219100 Autosomal recessive cutis laxa type 1B;Autosomal recessive cutis laxa type IA germline 11 65868557 GCTGCATCAACGAGCCAGGCCGTTTCTCCTGCCACTGCCCACAGGGTTACCAGCTGCTGGC 863224880 213614 NM_002180.2(IGHMBP2):c.92G>A (p.Trp31Ter) IGHMBP2 Feb 16, 2016 Human Phenotype Ontology:HP:0002169,MedGen:C0009024;Human Phenotype Ontology:HP:0001508,MedGen:C0231246;Gene:7974,Human Phenotype Ontology:HP:0001347,MedGen:C0151889,OMIM:145290;Human Phenotype Ontology:HP:0000508,MedGen:C0005745;Human Phenotype Ontology:HP:0002098,MedGen:C0476273,SNOMED CT:271825005;Human Phenotype Ontology:HP:0006829,MedGen:C1839630;MedGen:C1858517,OMIM:604320,Orphanet:ORPHA98920;Human Phenotype Ontology:HP:0002789,MedGen:C0231835 Clonus;Failure to thrive;Hyperreflexia;Ptosis;Respiratory distress;Severe muscular hypotonia;Spinal muscular atrophy, distal, autosomal recessive, 1;Tachypnea germline 11 68906074 AGCATCAATACCGGGTGTCTTCCAGGTCCTGGCAGGAGAACATCTCTCTGAAAGAGCTCCA 587779609 405509 NM_000090.3(COL3A1):c.3499G>A (p.Gly1167Ser) COL3A1 Aug 04, 2015 MedGen:CN517202 not provided germline 2 189008116 CCAGGTCCCATTGGACCACCAGGGCCTCGAGGTAACAGAGGTGAAAGAGGATCTGAGGTAA 387907281 45778 NM_152296.4(ATP1A3):c.2443G>A (p.Glu815Lys) ATP1A3 Oct 26, 2017 MedGen:C3553788,OMIM:614820;MedGen:C1868681,OMIM:128235,Orphanet:ORPHA71517;MedGen:CN517202 Alternating hemiplegia of childhood 2;Dystonia 12;not provided de novo;germline 19 41970284 GCCTAGGTCCCTGCCATCTCACTGGCGTACGAGGCTGCCGAAAGCGACATCATGAAGAGAC 864309492 215008 NM_001615.3(ACTG2):c.593G>A (p.Gly198Asp) ACTG2 Mar 27, 2014 MedGen:C1835084,OMIM:155310,Orphanet:ORPHA2241 Visceral myopathy de novo 2 73913626 ACTACCTCATGAAGATCCTCACAGAGAGAGGCTATTCCTTTGTGACCACAGGTATCCAGCC 606231284 167467 NM_021102.3(SPINT2):c.502G>A (p.Gly168Ser) SPINT2 Mar 01, 2014 MedGen:C2678346 Diarrhea 3, secretory sodium, congenital, syndromic germline 19 38290229 TGCAATAACTTCATCTATGGAGGCTGCCGGGGCAATAAGAACAGCTACCGCTCTGAGGAGG 137853207 32848 NM_001082971.1(DDC):c.304G>A (p.Gly102Ser) DDC Jul 06, 2010 MedGen:C1291564,OMIM:608643,Orphanet:ORPHA35708,SNOMED CT:124600004 Deficiency of aromatic-L-amino-acid decarboxylase germline 7 50539926 GACATGCTGTGCGGGGCCATTGGCTGCATCGGCTTCTCCTGGGTGAGGGTCCGGATGCACC 151340625 26840 NM_001127899.3(CLCN5):c.1727G>A (p.Gly576Glu) CLCN5 Feb 01, 1996 MedGen:C4016445 Nephrolithiasis, X-linked recessive germline X 50088867 GCATCACCCCCGGCCTTTATGCAATGGTTGGGGCTGCAGCCTGCTTAGGTGAGTAGTGTTT 776814755 422005 NM_000275.2(OCA2):c.2330G>A (p.Cys777Tyr) OCA2 Sep 03, 2015 MedGen:CN517202 not provided germline 15 27851390 CGCTCATGTATGCCCTGGCCTTCGGTGCTTGCCTGGGAGGTAAGGGGCTGCTGACTGCATG 587779685 107191 NM_000090.3(COL3A1):c.2221G>A (p.Gly741Ser) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188999569 AGAGGAGGTCTTGGAAGTCCTGGTCCAAAGGGTGACAAGGTGTTGACTTGTTTTCTCTTAA 587779777 132670 NM_001101.4(ACTB):c.625G>A (p.Val209Met) ACTB Apr 15, 2014 MedGen:C1855722,OMIM:243310,OMIM:608578,Orphanet:ORPHA2995 Baraitser-Winter syndrome 1 germline 7 5528458 AGCTTCACCACCACGGCCGAGCGGGAAATCGTGCGTGACATTAAGGAGAAGCTGTGCTACG 72653755 427059 NM_001171.5(ABCC6):c.676G>A (p.Gly226Arg) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16208846 GTGCCCCTCTTTTGCAGCCTGGTCTGGAGGGGATACAGGAGGCCACTGAGACCAAAAGACC 763818876 244114 NM_198576.3(AGRN):c.5611G>A (p.Gly1871Arg) AGRN Jul 14, 2016 MedGen:C0751882,Orphanet:ORPHA590 Congenital myasthenic syndrome germline 1 1051775 GCGGGGGACGTGGATACCTTGGCCTTTGACGGGCGGACCTTTGTCGAGTACCTCAACGCTG 199638097 265255 NM_000512.4(GALNS):c.139G>A (p.Gly47Arg) GALNS Dec 03, 2015 MedGen:C0086651,OMIM:253000,Orphanet:ORPHA309297,SNOMED CT:7259005 Mucopolysaccharidosis, MPS-IV-A germline 16 88842811 TCTTCCCTGCAGATGGGATGGGGTGACCTCGGGGTGTATGGAGAGCCCTCCAGAGAGACCC 147210663 143194 NM_000040.2(APOC3):c.127G>A (p.Ala43Thr) APOC3 Jul 03, 2014 MedGen:C0010068;MedGen:C3151467,OMIM:614028 Coronary heart disease;Hyperalphalipoproteinemia 2 germline 11 116830844 CAGGGTTACATGAAGCACGCCACCAAGACCGCCAAGGATGCACTGAGCAGCGTGCAGGAGT 72667022 32350 NG_007400.1:g.8207G>A COL1A1 Aug 01, 1991 MedGen:C0268345,OMIM:130060,SNOMED CT:55711009 Ehlers-Danlos syndrome, procollagen proteinase deficient germline 17 50198433 AACCGGAGGAATTTCCGTGCCTGGCCCCATGGTGAGCCAGCAGGGGGAGCATGGATGACAG 730880576 179234 NM_000256.3(MYBPC3):c.2748G>A (p.Trp916Ter) MYBPC3 Jul 13, 2012 MedGen:CN517202 not provided germline 11 47335199 CTCCCCCTCCCCACCCCCAGGCTCAGAGTGGGTGGCTGCCCTGCAGGGGCTGACAGAGCAC 794728215 197712 NM_000138.4(FBN1):c.4062G>A (p.Trp1354Ter) FBN1 Jan 20, 2013 MedGen:CN517202 not provided germline 15 48474553 AAGCTTCAAATGTAGCTGCAGTCCCGGGTGGATTGGAGATGGCATTAAGTGCACTGGTGAG 386833550 70708 NM_000170.2(GLDC):c.2284G>A (p.Gly762Arg) GLDC Jul 11, 2013 Human Phenotype Ontology:HP:0008288,MedGen:C0751748,OMIM:605899,Orphanet:ORPHA407,SNOMED CT:237939006 Non-ketotic hyperglycinemia not provided 9 6554700 CTTCACAAGACCTTCTGCATTCCCCACGGAGGAGGTGGTCCTGGCATGGGGCCCATCGGAG 587784143 168216 NM_022455.4(NSD1):c.5375G>A (p.Gly1792Glu) NSD1 Feb 08, 2013 MedGen:CN035106,OMIM:117550 Sotos syndrome 1 germline 5 177269673 CCAACATTGATAAGATGAGACATGATGTGGGAGAGTTCCCAGTCCTCTTTTTTGGATCTAA 68026851 26026 NM_000531.5(OTC):c.422G>A (p.Arg141Gln) OTC May 19, 2015 MedGen:C0268542,OMIM:311250,Orphanet:ORPHA664,SNOMED CT:80908008;MedGen:CN517202 Ornithine carbamoyltransferase deficiency;not provided germline;unknown X 38401310 TGTCTAGCATGGCAGATGCAGTATTGGCTCGAGTGTATAAACAATCAGATTTGGACACCCT 587776551 18074 NM_000051.3(ATM):c.3576G>A (p.Lys1192=) ATM Oct 09, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Ataxia-telangiectasia syndrome;Hereditary cancer-predisposing syndrome;not provided germline;unknown 11 108281168 GAATGGATTAGAACCTCACCTTGTGAAAAAGGTATATATGGATGAGTATTTTATTAGAAGC 199422152 34422 NM_018136.4(ASPM):c.2967G>A (p.Trp989Ter) ASPM Sep 01, 2009 MedGen:C1837501,OMIM:608716 Primary autosomal recessive microcephaly 5 not provided 1 197125161 GCGAACCATGGAACTTCTCACACAGAACTGGGACCTCTCAAAGAAACTCAGGATTCCGGCA 398123456 99120 NM_000528.3(MAN2B1):c.2398G>A (p.Gly800Arg) MAN2B1 Nov 05, 2012 MedGen:CN517202 not provided germline 19 12649174 CAGCTGACTGTGCTGACTGACCGCTCCCAGGGGGGCAGCAGCCTGAGAGATGGCTCGCTGG 886041369 265152 NM_000444.5(PHEX):c.1979G>A (p.Trp660Ter) PHEX Jun 12, 2017 MedGen:C0733682,OMIM:307800,Orphanet:ORPHA89936,SNOMED CT:82236004;MedGen:CN517202 Familial X-linked hypophosphatemic vitamin D refractory rickets;not provided germline X 22227520 TCTTCTTCTCTCACCAGGCTTACAGGAAATGGATAAATGACAGAAGGCAGGGACTTGAGGA -1 433419 NM_001844.4(COL2A1):c.1537G>A (p.Gly513Ser) COL2A1 Jan 22, 2017 MedGen:CN169374 not specified germline 12 47985956 CTCCTCCCTGTGGCTCCTTAGGGTGCTCCCGGCAACCGCGGTTTCCCAGGTCAAGATGGTC 281865417 24711 m.6277G>A MT-CO1 Mar 03, 2009 MedGen:CN029768 Familial colorectal cancer germline MT 6277 CTGCTATAGTGGAGGCCGGAGCAGGAACAGGTTGAACAGTCTACCCTCCCTTAGCAGGGAA 387906324 33476 NM_021625.4(TRPV4):c.547G>A (p.Glu183Lys) TRPV4 Apr 02, 2014 Human Phenotype Ontology:HP:0002652,MedGen:C0410528,SNOMED CT:105986008;MedGen:C3159322,OMIM:184095 Skeletal dysplasia;Spondyloepiphyseal dysplasia Maroteaux type germline 12 109808308 TTGCTGACCCACAAGAAACGCCTAACTGATGAGGAGTTTCGAGGTGAGCCACCCAGATGGG -1 466817 NM_004360.4(CDH1):c.467G>A (p.Trp156Ter) CDH1 Apr 05, 2017 MedGen:C1708349,OMIM:137215,Orphanet:ORPHA26106 Hereditary diffuse gastric cancer germline 16 68808503 CTCCTGGCCTCAGAAGACAGAAGAGAGACTGGGTTATTCCTCCCATCAGCTGCCCAGAAAA 267606956 19885 NM_007254.3(PNKP):c.976G>A (p.Glu326Lys) PNKP Apr 02, 2015 MedGen:C3150667,OMIM:613402;MedGen:CN517202 Early infantile epileptic encephalopathy 10;not provided germline 19 49862424 AACCTTGGCCTGCCCTTCGCCACGCCTGAGGAGTTCTTTCTCAAGTGGCCAGCAGCCGGCT 121912946 32162 NM_080680.2(COL11A2):c.4322G>A (p.Gly1441Glu) COL11A2 Nov 02, 1998 MedGen:C1861481,OMIM:184840 Stickler syndrome, type 3 germline 6 33166736 GGGGACTTCCTGGGCCTCAGGGCTCCCCTGGGCAGAAGGGTGAGATGGTGAGTAGAGGGCA 750436680 214371 NM_030578.3(B9D2):c.463G>A (p.Gly155Ser) B9D2 Feb 23, 2015 Human Phenotype Ontology:HP:0002335,MedGen:C0431399,Orphanet:ORPHA475,SNOMED CT:253175003,SNOMED CT:716997004 Joubert syndrome unknown 19 41354765 GACCGCTATCGCCTGCACACAGCTGCTGGTGGCACCGTGCACCTGGAGATCGGCCTGCTGC 752673677 107261 NM_198173.2(GRHL3):c.893G>A (p.Arg298His) GRHL3 Jan 02, 2014 MedGen:C1847604,OMIM:606713 Van der Woude syndrome 2 germline 1 24338044 ACAATGAGAAGGTCCCAGTAGAGCAGCTGCGCTTCTGGAAGCACTGGCATTCCCGGCAACC 1060499936 390651 NM_001128849.1(SMARCA4):c.2851G>A (p.Gly951Arg) SMARCA4 Mar 09, 2017 MedGen:C3553249,OMIM:614609 Mental retardation, autosomal dominant 16 de novo 19 11021959 CAGTGGTTTAACGCACCCTTTGCCATGACCGGGGAAAAGGTGGGTTTGCCCAGCTGTGCCC 72658137 259885 NM_000089.3(COL1A2):c.1658G>A (p.Gly553Asp) COL1A2 Aug 25, 2016 MedGen:CN517202 not provided germline 7 94413940 AAGGTGAACAGGGTCCCCCTGGTCCTCCAGGCTTCCAGGTAAGTCAACTCAAACATATACA 879253768 244034 NM_021831.5(AGBL5):c.883G>A (p.Asp295Asn) AGBL5 Sep 06, 2017 MedGen:C4310759,OMIM:617023 Retinitis pigmentosa 75 germline 2 27055228 GTCTTTAAGCTGATTCCCATGTTGAACCCCGATGGTGTGGTCCGGGGACACTACCGGTAAG 527236139 152888 NM_206933.2(USH2A):c.11156G>A (p.Arg3719His) USH2A May 26, 2015 Human Phenotype Ontology:HP:0000547,MeSH:D012174,MedGen:C0035334,OMIM:268000,Orphanet:ORPHA791,SNOMED CT:28835009;MedGen:C1848634,OMIM:276901;MedGen:CN517202 Retinitis pigmentosa;Usher syndrome, type 2A;not provided germline;unknown 1 215759735 ATGGCCTCGTTTCTCAATATCAATTGAGTCGTAATGGAAACTTGCTTTTCCTGGGTGGCAG 104894341 32884 NM_000486.5(AQP2):c.568G>A (p.Ala190Thr) AQP2 Dec 15, 2004 MedGen:C4015884 Diabetes insipidus, nephrogenic, autosomal recessive germline 12 49954672 GGCTGCTCTATGAATCCTGCCCGCTCCCTGGCTCCAGCTGTCGTCACTGGCAAATTTGATG 587779419 106849 NM_000090.3(COL3A1):c.1033G>A (p.Gly345Arg) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188992923 CCTGGTCCTCCTGGAACTGCCGGATTCCCTGGATCCCCTGGTGCTAAGGTAAACATGTGTT 121912633 20032 NM_021625.4(TRPV4):c.1858G>A (p.Val620Ile) TRPV4 Aug 09, 2017 MedGen:C0432227,OMIM:113500,Orphanet:ORPHA93304,SNOMED CT:254087001;MedGen:C2079540,OMIM:606071;MedGen:C0027868,Orphanet:ORPHA68381;Human Phenotype Ontology:HP:0002652,MedGen:C0410528,SNOMED CT:105986008;Human Phenotype Ontology:HP:0002652,MedGen:C0410528,SNOMED CT:105986008 Brachyrachia (short spine dysplasia);Charcot-Marie-Tooth disease type 2C;Neuromuscular Diseases;Skeletal dysplasia;Skeletal dysplasia germline 12 109792396 CTCTTCAAGGACCTTTTCCGATTCCTGCTCGTCTACTTGCTCTTCATGATCGGCTACGCTT 267606317 92943 NM_178151.2(DCX):c.305G>A (p.Arg102His) DCX Sep 30, 2016 Human Phenotype Ontology:HP:0002282,MedGen:C0008519;MedGen:CN517202 Heterotopia;not provided germline X 111410094 CTGACAACATCAACCTGCCTCAGGGAGTGCGTTACATTTACACCATTGATGGATCCAGGAA 137852398 25224 NM_000132.3(F8):c.797G>A (p.Gly266Glu) F8 Sep 12, 2013 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154969543 TGTCTTATTCCTACTTTACAGGTCTGATTGGATGCCACAGGAAATCAGTCTATTGGCATGT 1060502644 404277 NM_004006.2(DMD):c.1061G>A (p.Trp354Ter) DMD Mar 08, 2017 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Duchenne muscular dystrophy germline X 32645052 ATCAAACAGCTTTAGAAGAAGTATTATCGTGGCTTCTTTCTGCTGAGGACACATTGCAAGC 121912898 32441 NM_001844.4(COL2A1):c.170G>A (p.Cys57Tyr) COL2A1 Jan 01, 2008 MedGen:C1836080,OMIM:609508 Stickler syndrome, type I, nonsyndromic ocular germline 12 48000041 GGAAGCCGGAGCCCTGCCGGATCTGTGTCTGTGACACTGGGACTGTCCTCTGCGACGACAT 267608479 165884 NM_003159.2(CDKL5):c.463+1G>A CDKL5 Mar 13, 2014 MedGen:C2748910,Orphanet:ORPHA3095;MedGen:CN517202 Atypical Rett syndrome;not provided de novo X 18581951 ACAATGATGTCCTAAAACTGTGTGACTTTGGTAAGTTAAAAAGAAATTAAGTCCTGGTACT 761575295 273767 NM_005603.5(ATP8B1):c.279G>A (p.Ala93=) ATP8B1 Jul 14, 2016 MedGen:C0268312,OMIM:211600,Orphanet:ORPHA172,SNOMED CT:74162007 Progressive intrahepatic cholestasis germline 18 57706490 ATTCTTGTGTATTAAGGAGAGTAAATATGCGGTGAGTTGTTAACTTTCTGAATTGTTTTCA -1 481759 NM_001320.6(CSNK2B):c.36G>A (p.Trp12Ter) CSNK2B Dec 07, 2017 MedGen:CN517202 not provided germline 6 31666867 CAGCTCAGAGGAGGTGTCCTGGATTTCCTGGTTCTGTGGGCTCCGTGGCAATGAATTCTTC -1 481734 NM_022455.4(NSD1):c.5229G>A (p.Trp1743Ter) NSD1 Jun 15, 2017 MedGen:CN517202 not provided germline 5 177267644 CCTGAACATTGATATCCCTGAAGGAAACTGGTATTGCAATGACTGTAAAGCAGGCAAAAAG 137852908 17935 NM_000419.4(ITGA2B):c.1073G>A (p.Arg358His) ITGA2B Oct 19, 2016 MedGen:C0040015,OMIM:273800,Orphanet:ORPHA849,SNOMED CT:32942005 Glanzmann thrombasthenia germline 17 44383630 GGGCAGACCGAAAACTGGCCGAAGTGGGGCGTGTGTATTTGTTCCTGCAGCCGCGAGGCCC 794726658 17243 NM_018668.4(VPS33B):c.700+1G>A VPS33B Dec 01, 2007 MedGen:C1859722,OMIM:208085,Orphanet:ORPHA2697 Arthrogryposis renal dysfunction cholestasis syndrome germline 15 91006949 AGATTGGACATATCTTTCTCTTGGACAGAGGTAAATTATGCCCAGCGTTCCTGTCATCTTT 121434346 17058 NM_001003841.2(SLC6A19):c.517G>A (p.Asp173Asn) SLC6A19 Jul 24, 2017 MedGen:C0018609,OMIM:234500,Orphanet:ORPHA2116,SNOMED CT:80902009;MedGen:CN517202 Neutral 1 amino acid transport defect;not provided germline 5 1212338 GTGGACGAGTGCGCCAGGAGCTCCCCTGTGGACTACTTCTGGTACCGAGAGACGCTCAACA 886037658 106770 NM_012229.4(NT5C2):c.175+1G>A NT5C2 Jan 31, 2014 Gene:100322879,MedGen:C3888209,OMIM:613162 Spastic paraplegia 45, autosomal recessive germline 10 103139405 TTGGTTTTGATATGGATTATACCCTTGCTGGTGAGTAGCAATTTCTGATTGCTTAAGAACT 121912649 27743 NM_003235.4(TG):c.5690G>A (p.Cys1897Tyr) TG Jan 01, 2006 MedGen:C0342194,OMIM:274700,SNOMED CT:23536000 Iodotyrosyl coupling defect germline 8 132967797 AAAATCACACTACTCTCTTGCCTGTAGGTTGTGTGCAGGAGCACTCTTTCTGTCAGCTCGC 121913641 29146 NM_000257.3(MYH7):c.2156G>A (p.Arg719Gln) MYH7 Jun 12, 2017 MedGen:CN230736;MedGen:C3495498,OMIM:192600;Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Cardiovascular phenotype;Familial hypertrophic cardiomyopathy 1;Hypertrophic cardiomyopathy;Primary familial hypertrophic cardiomyopathy;not provided germline 14 23425970 TCCCCAACCGCATCCTCTACGGGGACTTCCGGCAGAGGTGGGTATGAGGGTGCACCAGAGC 180177170 200434 NM_000030.2(AGXT):c.125G>A (p.Gly42Glu) AGXT Nov 27, 2014 MedGen:C0268164,OMIM:259900,Orphanet:ORPHA93598,SNOMED CT:65520001 Primary hyperoxaluria, type I germline 2 240868990 ACCTGCCTCCTCGCATCATGGCAGCCGGGGGGCTGCAGATGATCGGGTCCATGAGCAAGGA 121908099 19299 NM_000784.3(CYP27A1):c.1214G>A (p.Arg405Gln) CYP27A1 Mar 18, 2016 MedGen:C0238052,OMIM:213700,Orphanet:ORPHA909,SNOMED CT:63246000 Cholestanol storage disease germline 2 218814409 GTCTCTACCCTGTGGTCCCCACAAACTCCCGGATCATAGAAAAGGAAATTGAAGTTGATGG 121434439 21880 NM_014236.3(GNPAT):c.632G>A (p.Arg211His) GNPAT Jan 15, 2001 MedGen:C1857242,OMIM:222765,Orphanet:ORPHA309796 Rhizomelic chondrodysplasia punctata type 2 germline 1 231265356 TACGAATGTCGGGTGCCTTTTTCATGCGGCGTACCTTTGGTGGCAATAAACTCTACTGGGC 62642574 105193 NM_000350.2(ABCA4):c.4594G>A (p.Asp1532Asn) ABCA4 Jan 01, 2016 MeSH:C535804,MedGen:C1855465,OMIM:248200;MedGen:CN517202 Stargardt disease 1;not provided germline 1 94024994 CTACAAGACCTGACGGACAGGAACATCTCCGACTTCTTGGTAAAAACGTATCCTGCTCTTA 1060500286 401885 NM_000267.3(NF1):c.7044G>A (p.Trp2348Ter) NF1 Jul 22, 2016 MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003 Neurofibromatosis, type 1 germline 17 31343053 ATTTATGGCAATCCGGAATCCTCTGGAGTGGCACTGCAAGCAAATGGATCATTTTGTTGGA 104894424 21032 NM_014252.3(SLC25A15):c.538G>A (p.Glu180Lys) SLC25A15 Apr 20, 2017 MedGen:C0268540,OMIM:238970,Orphanet:ORPHA415,SNOMED CT:30287008;MedGen:CN517202 Hyperornithinemia-hyperammonemia-homocitrullinuria syndrome;not provided germline 13 40807379 TACCATGGACTCTCAAGCACTTTACTTCGAGAAGTACCAGGCTATTTCTTCTTCTTCGGTG 113994047 269353 NM_003907.2(EIF2B5):c.241G>A (p.Glu81Lys) EIF2B5 Nov 25, 2015 MedGen:C1858991,OMIM:603896,Orphanet:ORPHA99854 Leukoencephalopathy with vanishing white matter germline 3 184136657 GCCAATGTGGCATTAATTGACTACACTCTGGAATTCCTGACTGCCACAGGTGTACAGGAAA -1 438546 NM_006164.4(NFE2L2):c.91G>A (p.Gly31Arg) NFE2L2 Oct 30, 2017 MedGen:CN578218,OMIM:617744 IMMUNODEFICIENCY, DEVELOPMENTAL DELAY, AND HYPOHOMOCYSTEINEMIA germline 2 177234226 GACATACTTTGGAGGCAAGATATAGATCTTGGAGTAAGTCGAGAAGTATTTGACTTCAGTC 587779021 95738 NM_000249.3(MLH1):c.545G>A (p.Arg182Lys) MLH1 Sep 05, 2013 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Lynch syndrome germline 3 37008905 AATATGGGAAAATTTTGGAAGTTGTTGGCAGGTACAGTCCAAAATCTGGGAGTGGGTCTCT 121912447 29808 NM_000454.4(SOD1):c.436G>A (p.Ala146Thr) SOD1 Sep 01, 1995 MedGen:C1862939,OMIM:105400 Amyotrophic lateral sclerosis type 1 germline 21 31668549 ACAAAGACAGGAAACGCTGGAAGTCGTTTGGCTTGTGGTGTAATTGGGATCGCCCAATAAA 45517259 27442 NM_000548.4(TSC2):c.2714G>A (p.Arg905Gln) TSC2 May 11, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1860707,OMIM:613254;MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Tuberous sclerosis 2;Tuberous sclerosis syndrome;not provided germline 16 2076142 TGTGGTTCATCAGGTGCCGCCTGCCCTTCCGGAAGGATTTTGTCCCTTTCATCACTAAGGT 281865557 426852 NM_001171.5(ABCC6):c.3735G>A (p.Glu1245=) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16159482 GATGCAGGACTATGCCTGGACGCCCAAGGAGGTGATGGGCGGGAGGTGGGGAGGGGGTCCC 886040969 262392 NM_022162.2(NOD2):c.2446G>A NOD2 Oct 27, 2016 MedGen:C0004943,OMIM:109650,Orphanet:ORPHA117,SNOMED CT:310701003 Behcet's syndrome germline 16 50712357 GGCGTGGAGCAGCTGCTGCCTTGCCTTGGTGTCTGCAAGGCTCTGTAGTGAGTGTTACTGG 267607884 95459 NM_000249.3(MLH1):c.1990-1G>A MLH1 Sep 05, 2013 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Lynch syndrome germline 3 37048903 TATTTTGAGGTATTGAATTTCTTTGGACCAGGTGAATTGGGACGAAGAAAAGGAATGTTTT 794727219 192079 NM_000182.4(HADHA):c.2146+1G>A HADHA Jul 15, 2014 MedGen:CN074230,OMIM:609016;MedGen:C0342786,OMIM:609015,SNOMED CT:237999008 Long-chain 3-hydroxyacyl-CoA dehydrogenase deficiency;Mitochondrial trifunctional protein deficiency germline 2 26191482 TTGGGCTTGGCTTCCCGCCTTGTCTGGGAGGTTGGTCTCGCAGGTTGGGAAGGAAGCTCAC 879254707 245834 NM_000527.4(LDLR):c.887G>A (p.Cys296Tyr) LDLR Dec 16, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11107461 GCGGCGAATGCATCACCCTGGACAAAGTCTGCAACATGGCTAGAGACTGCCGGGACTGGTC 550921485 187952 NM_002143.2(HPCA):c.568G>A (p.Ala190Thr) HPCA Apr 02, 2015 Gene:1862,MedGen:C1857093,OMIM:224500,Orphanet:ORPHA99657 Dystonia 2, torsion, autosomal recessive germline 1 32893848 GTGCGTCTGCTGCAGTGCGACCCCAGCAGCGCCTCCCAGTTCTGAGAGGAGCCAGGTTCCC 397516067 51953 NM_000256.3(MYBPC3):c.655-1G>A MYBPC3 Aug 25, 2017 MedGen:CN230736;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Cardiovascular phenotype;Primary familial hypertrophic cardiomyopathy;not provided germline 11 47348542 CCCCTGACGCCCCGTCCCTCCATGCACACAGGTCTATCTGTTCGAGCTGCACATCACCGAT 28931607 31942 NM_000941.2(POR):c.1706G>A (p.Cys569Tyr) POR Jun 26, 2004 MedGen:C2673964,OMIM:613571 Disordered steroidogenesis due to cytochrome p450 oxidoreductase deficiency germline 7 75985959 AGGTGGGGGAGACGCTGCTGTACTACGGCTGCCGCCGCTCGGATGAGGACTACCTGTACCG 398123025 59845 NM_003867.3(FGF17):c.530G>A (p.Arg177His) FGF17 May 02, 2013 MedGen:C4016855 Hypogonadotropic hypogonadism 20 without anosmia germline 8 22048128 AGAACCAGCGCGAGGCCCACTTCATCAAGCGCCTCTACCAAGGCCAGCTGCCCTTCCCCAA 28679680 24707 m.6930G>A MT-CO1 Sep 01, 1999 MedGen:C0268237,OMIM:220110,Orphanet:ORPHA254905,SNOMED CT:67434000 Hepatic failure, early-onset, and neurologic disorder due to cytochrome C oxidase deficiency germline MT 6930 AAATGATCTGCTGCAGTGCTCTGAGCCCTAGGATTCATCTTTCTTTTCACCGTAGGTGGCC 199469629 106421 NM_017415.2(KLHL3):c.1151G>A (p.Arg384Gln) KLHL3 - Gene:7830,MedGen:C1449844,OMIM:145260,Orphanet:ORPHA757,SNOMED CT:15689008 Pseudohypoaldosteronism, type 2 germline 5 137639021 GGACGTCCATTGCCAGCATGCAGGAGCGCCGGAGCACACTGGGCGCAGCGGTGCTCAATGA 104886396 35604 NM_000495.4(COL4A5):c.385-719G>A COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108570694 TCGGGACCTACTTTTTCCATGTGTAACAAGGTGGAGAGAAGGGTATTGGACTCACAAAGAC 281874656 35704 NM_000495.4(COL4A5):c.1084G>A (p.Gly362Arg) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108586666 GGTATAACTATAGGAGAAAAAGGAAACATTGGGTTGCCTGGGTTGCCTGGAGAAAAAGGAG 587777389 136556 NM_005026.4(PIK3CD):c.1573G>A (p.Glu525Lys) PIK3CD Jan 01, 2014 MedGen:C3714976,OMIM:615513,Orphanet:ORPHA397596 Immunodeficiency 14 de novo;germline 1 9720793 CTGGAGCGGCGGGGGTCTGGGGAGCTGTATGAGCACGAGAAGGACCTGGTGTGGAAGCTGC 386833554 70712 NM_000170.2(GLDC):c.2316-1G>A GLDC Apr 28, 2017 Human Phenotype Ontology:HP:0008288,MedGen:C0751748,OMIM:605899,Orphanet:ORPHA407,SNOMED CT:237939006 Non-ketotic hyperglycinemia germline 9 6553510 TTTTCTGAATTTGCACTTAAAAAAAATACAGGAAGAAACATCTCGCCCCGTTTTTGCCCAA 755938967 431409 NM_152558.4(IQCE):c.395-1G>A IQCE Aug 23, 2017 MedGen:CN417139,OMIM:617642 POLYDACTYLY, POSTAXIAL, TYPE A7 germline 7 2573417 TCTTTGAAACGATTTGTTTATGTTTCTCTAGGTCATGTCCCTGGGACTCCTGTCTACAGAG 120074121 18025 NM_000543.4(SMPD1):c.1152G>A (p.Met384Ile) SMPD1 Mar 11, 2010 MedGen:C0268242,OMIM:257200,Orphanet:ORPHA77292,SNOMED CT:52165006 Niemann-Pick disease, type A germline 11 6393276 CCCCGGTCTCCGCCTCATCTCTCTCAATATGAATTTTTGTTCCCGTGAGAACTTCTGGCTC 80356537 45777 NM_152296.4(ATP1A3):c.2401G>A (p.Asp801Asn) ATP1A3 May 18, 2017 MedGen:C3553788,OMIM:614820;MedGen:C3553788,OMIM:614820;MedGen:C1832466,OMIM:601338,Orphanet:ORPHA1171;MedGen:C1868681,OMIM:128235,Orphanet:ORPHA71517;MedGen:CN517202 Alternating hemiplegia of childhood 2;Alternating hemiplegia of childhood 2;Cerebellar ataxia, areflexia, pes cavus, optic atrophy and sensorinural hearing loss;Dystonia 12;not provided de novo;germline;unknown 19 41970405 CCCCTGGGCACCATCACCATCCTCTGCATCGATCTGGGCACTGACATGGTGAGCCCTGGCA 727504443 173844 NM_004415.3(DSP):c.939+1G>A DSP Jul 06, 2017 MedGen:C0349788,Orphanet:ORPHA247,SNOMED CT:253528005,SNOMED CT:281170005;MedGen:C1843896,OMIM:607450;Human Phenotype Ontology:HP:0001638,MedGen:C0878544,Orphanet:ORPHA167848,SNOMED CT:85898001;MedGen:CN517202 Arrhythmogenic right ventricular cardiomyopathy;Arrhythmogenic right ventricular cardiomyopathy, type 8;Cardiomyopathy;not provided germline 6 7565521 AACATCGCTCAGAAACAGGAGGCCTTCTCCGTAAGTTCACCCCACGCGGCTGTAGATGCTT 387906905 39430 NM_021625.4(TRPV4):c.947G>A (p.Arg316His) TRPV4 Apr 05, 2016 MedGen:C2079540,OMIM:606071;Human Phenotype Ontology:HP:0003457,MedGen:C0476403;Human Phenotype Ontology:HP:0007210,MedGen:C4024921;MedGen:C0027868,Orphanet:ORPHA68381;Human Phenotype Ontology:HP:0001762,MedGen:C1842988;MedGen:CN517202 Charcot-Marie-Tooth disease type 2C;EMG abnormality;Lower limb amyotrophy;Neuromuscular Diseases;Talipes equinovarus;not provided germline;unknown 12 109798819 AGAACCCCCACAAGAAGGCGGACATGCGGCGCCAGGACTCGCGAGGCAACACAGTGCTGCA 397516355 52562 NM_000363.4(TNNI3):c.544G>A (p.Glu182Lys) TNNI3 Sep 10, 2014 EFO:EFO_0000407,Human Phenotype Ontology:HP:0001644,MedGen:C0007193,Orphanet:ORPHA217604,SNOMED CT:195021004;MedGen:CN517202 Primary dilated cardiomyopathy;not provided germline 19 55154035 CACCTCAAGCAGGTGAAGAAGGAGGACACCGAGAAGGTGAGTGTGGGCTAAGGCCAGGAAA 141638421 51094 NM_001885.2(CRYAB):c.470G>A (p.Arg157His) CRYAB Apr 18, 2013 MedGen:C3554649,OMIM:615184 Dilated cardiomyopathy 1II germline 11 111908822 GACCAAGGAAACAGGTCTCTGGCCCTGAGCGCACCATTCCCATCACCCGTGAAGAGAAGCC 797045341 209231 NM_000052.6(ATP7A):c.1946+5G>A ATP7A Feb 08, 2013 MedGen:C0022716,OMIM:309400,Orphanet:ORPHA565,SNOMED CT:59178007 Menkes kinky-hair syndrome germline X 78011257 TTAGATCATAAACGAGAAATAAGACAGTAAGTACTTTGGAGTGTCAGTAAAAAACAGATTT 797044544 181176 NM_020822.2(KCNT1):c.2688G>A (p.Met896Ile) KCNT1 Feb 19, 2015 MedGen:C3554306,OMIM:615005 Epilepsy, nocturnal frontal lobe, 5 germline 9 135778781 GAGCACCATGAGCGCCGAGGAGGACTACATGGCGGACGCCAAGACCATCGTCAACGTGCAG 199422220 29277 NM_000253.3(MTTP):c.1619G>A (p.Arg540His) MTTP Nov 22, 1996 MedGen:C0000744,OMIM:200100,Orphanet:ORPHA14,SNOMED CT:190787008 Abetalipoproteinaemia germline 4 99608827 AAAACCGTAAAGTTCATGAAAAGACTGTGCGCACTGCTGCAGCTGCTATCATTTTAAATAA 398123646 99811 NM_001849.3(COL6A2):c.1522-1G>A COL6A2 Oct 24, 2013 MedGen:CN029274,OMIM:158810;MedGen:CN033863,OMIM:254090 Bethlem myopathy 1;Ullrich congenital muscular dystrophy 1 germline 21 46122107 CCATGCTGACCGACTCAACGTCCTCCTCCAGGGAGACCCCGGCAGGCCTGGATTCAGCTAC 876657722 229537 NM_000441.1(SLC26A4):c.1544+1G>A SLC26A4 Jan 11, 2016 Human Phenotype Ontology:HP:0011387,MedGen:C1863752,OMIM:600791;MedGen:C0271829,OMIM:274600,Orphanet:ORPHA705,SNOMED CT:70348004;MedGen:C0271829,OMIM:274600,Orphanet:ORPHA705,SNOMED CT:70348004 Enlarged vestibular aqueduct;Pendred's syndrome;Pendred's syndrome germline;unknown 7 107696040 ACTGTTGACTGTGGTCCTGAGAGTTCAGTTGTGAGTAACGTAAAACCCAGATTTCCTATAA 104886448 35685 NM_000495.4(COL4A5):c.937-1G>A COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108582883 CTGATGTCACCCTATCCTCTATGTTTTAAAGGGTTTGCCTGGTGATCCTGGTTACCCTGGT 104894173 22626 NM_006214.3(PHYH):c.610G>A (p.Gly204Ser) PHYH May 01, 2000 MedGen:C2749345 Refsum disease, adult, 1 germline 10 13288428 ACGGCGATGGAGCACATCAGCCGGAACAACGGCTGTCTGGTTGTGCTCCCAGGCACACACA 606231456 171252 NM_001543.4(NDST1):c.2126G>A (p.Arg709Gln) NDST1 Dec 03, 2014 MedGen:C4015283,OMIM:616116 Mental retardation, autosomal recessive 46 germline 5 150545467 TCCTGACCATCCTCATCAACCCCGCGGACCGGGCCTATTCCTGGTACCAGGTGAGTGGGGC 72558468 103255 NM_000531.5(OTC):c.931G>A (p.Val311Met) OTC - MedGen:CN517202 not provided unknown X 38411925 TTACACTGCTTGCCCAGAAAGCCAGAAGAAGTGGATGATGAAGTCTTTTATTCTCCTCGAT 121434408 21503 NM_001003722.1(GLE1):c.1849G>A (p.Val617Met) GLE1 Feb 01, 2008 MedGen:C2678471,OMIM:611890,Orphanet:ORPHA53696 Lethal arthrogryposis with anterior horn cell disease germline 9 128538058 CAGATCTTAAACATGGAGCCCTTGTCAGATGTGACAGCCACCCTCCTCTTTGACTTCCTGG 121918128 15437 NM_019892.5(INPP5E):c.1688G>A (p.Arg563His) INPP5E Sep 01, 2009 MedGen:CN119531,OMIM:213300 Joubert syndrome 1 germline 9 136430391 TCCCAAAGGACCGCGTCTTGTACAGAAGCCGCCACAAGGGTGACATCTGTCCTGTGAGCTA 1060500245 433236 NM_000267.3(NF1):c.654+1G>A NF1 Oct 05, 2016 MedGen:CN169374 not specified germline 17 31181490 CAGTTAGCAGTTATAAATAGCCTGGAAAAGGTAAGTTACAACCTCTCTGGTATTAAAATTT 796053126 201348 NM_021007.2(SCN2A):c.2995G>A (p.Glu999Lys) SCN2A Jul 25, 2017 MedGen:C3150987,OMIM:613721;MedGen:CN517202 Early infantile epileptic encephalopathy 11;not provided germline;unknown 2 165354267 GACAATCTTGCTGCCACTGATGATGATAACGAAATGAATAATCTCCAGATTGCTGTGGGAA 121913039 31702 NM_001953.4(TYMP):c.622G>A (p.Val208Met) TYMP Jul 19, 2017 MedGen:C0872218,OMIM:603041,Orphanet:ORPHA298;MedGen:CN517202 Mitochondrial DNA depletion syndrome 1 (MNGIE type);not provided germline 22 50527612 CTATATGCAGCCAGAGATGTGACAGCCACCGTGGACAGCCTGCCACTCATCACAGGTGACC 147785187 433589 NM_005142.2(GIF):c.79+1G>A GIF Dec 23, 2016 MedGen:CN169374 not specified germline 11 59845374 GGACTAGTACCCAGACCCAGAGTTCATGCTGTGAGTATGATGTTTTTCCAAGGAGGTCAGG 387907000 39711 NM_133261.2(GIPC3):c.903G>A (p.Trp301Ter) GIPC3 Feb 15, 2011 MedGen:C1866094,OMIM:601869 Deafness, autosomal recessive 15 germline 19 3590154 CTTCCCCGACGAGTTTGTGGTGGAAGTGTGGGCCGCCATCGGCGAGGCCAGAGAGGCCTGT 587783086 166459 NM_003159.2(CDKL5):c.577G>A (p.Asp193Asn) CDKL5 Nov 27, 2012 MedGen:CN517202 not provided germline X 18587976 TTTTTCAGCGCTCCCTATGGAAAGTCCGTGGACATGTGGTCGGTGGGCTGTATTCTTGGGG 370686447 98354 NM_000137.2(FAH):c.456G>A (p.Trp152Ter) FAH Jun 26, 2013 MedGen:C0268490,OMIM:276700,Orphanet:ORPHA882,SNOMED CT:124536006,SNOMED CT:410056006 Tyrosinemia type I germline 15 80168052 GCCCTGCATTCTCTTGCCTTCCTTTCTCAGGCTGCACTTACCAGTGGGCTACCATGGCCGT 80358070 46123 NM_007294.3(BRCA1):c.4097-1G>A BRCA1 Aug 10, 2015 MedGen:C2676676,OMIM:604370 Breast-ovarian cancer, familial 1 germline 17 43091033 TACATCTGAACCTCTGTTTTTGTTATTTAAGGTGAAGCAGCATCTGGGTGTGAGAGTGAAA 11539445 108176 NM_001040436.2(YARS2):c.572G>A (p.Gly191Asp) YARS2 Dec 17, 2013 MedGen:C3150802,OMIM:613561 Myopathy, lactic acidosis, and sideroblastic anemia 2 germline 12 32755303 ACCTGGTGGACTTCCTGGCGGCAGTGGGGGGTCACTTCCGCATGGGGACGCTGCTGAGCCG 886039759 260384 NM_024818.4(UBA5):c.778G>A (p.Val260Met) UBA5 Oct 06, 2016 MedGen:C4310700,OMIM:617132 Epileptic encephalopathy, early infantile, 44 germline 3 132672143 TGTGCAGCCAGTCTTCCTACCACTATGGGTGTGGTTGCTGGGATCTTAGTACAAAACGTGT 761988162 264753 NM_000135.2(FANCA):c.4011-1G>A FANCA Jun 30, 2016 MedGen:CN517202 not provided germline 16 89739290 TAGCCATTTGTCACTATGTCTTTACCTCTAGTCTTCTCTCCTACTTCCATGAAGACGCGGC 267606819 33458 NM_014053.3(FLVCR1):c.721G>A (p.Ala241Thr) FLVCR1 Nov 12, 2010 MedGen:C1836916,OMIM:609033,Orphanet:ORPHA88628 Posterior column ataxia with retinitis pigmentosa germline 1 212859173 CCCAAAGAGGTGTCCACAGCTTGTGCCACCGCCGTGCTGGGCAATCAGGTAAGTACTGGAG 587779461 106898 NM_000090.3(COL3A1):c.2337G>A (p.Lys779=) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189001450 TCCTGGCCCAGCTGGCCAGCCTGGAGATAAGGTAACCCTTAATACTACCTGGATATAAAAA 876659874 236240 NM_058216.2(RAD51C):c.914G>A (p.Trp305Ter) RAD51C Jul 06, 2017 MedGen:C3150653,OMIM:613390;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Fanconi anemia, complementation group O;Hereditary cancer-predisposing syndrome;not provided germline 17 58724049 TATTATGTTTTTTACTCTCAGGGGAAAGTTGGGGACATGCTGCTACAATACGGCTAATCTT 1060501488 404370 NM_001242896.1(DEPDC5):c.434G>A (p.Trp145Ter) DEPDC5 May 07, 2016 Gene:50987,MedGen:C1858477,OMIM:604364 Epilepsy, familial focal, with variable foci 1 germline 22 31778119 ATTCTTTCAGAGCACAGGCTGGTGAACTGTGGGTTAAGAATGAGAAGGTCATGTGTGGCTA 74315291 32535 NM_000748.2(CHRNB2):c.859G>A (p.Val287Met) CHRNB2 Sep 20, 2012 MedGen:C1854335,OMIM:605375 Epilepsy, nocturnal frontal lobe, type 3 germline 1 154571682 ACGGTCTTCCTGCTGCTCATCTCCAAGATCGTGCCTCCCACCTCCCTCGACGTGCCGCTCG 132630314 26076 NM_001399.4(EDA):c.467G>A (p.Arg156His) EDA Sep 05, 2017 MedGen:C0162359,OMIM:305100,SNOMED CT:239007005;Human Phenotype Ontology:HP:0007607,MedGen:C1706004,Orphanet:ORPHA238468;MedGen:CN517202 Hypohidrotic X-linked ectodermal dysplasia;Hypohidrotic ectodermal dysplasia;not provided germline X 69957097 ACTCTGAAGAAGAAAGTAGGCGTGTTCGCCGCAATAAAAGAAGCAAAAGCAATGAAGGAGC 122459146 26593 NM_001159702.2(FHL1):c.449G>A (p.Cys150Tyr) FHL1 Jan 27, 2009 MedGen:C2678027,OMIM:300717 Myopathy, reducing body, X-linked, early-onset, severe germline X 136207909 GCTTCTTCCCTAAAGGGGAGGACTTCTACTGCGTGACTTGCCATGAGACCAAGTTTGCCAA 587777191 106824 NM_005017.3(PCYT1A):c.295G>A (p.Ala99Thr) PCYT1A Jan 02, 2014 MedGen:C1837073,OMIM:608940,Orphanet:ORPHA85167 Spondylometaphyseal dysplasia with cone-rod dystrophy germline 3 196248246 CACTCTGGTCACGCCCGAGCTCTGATGCAAGCGAAGAACCTTTTCCCTAATACGTACCTCA 139751448 187031 NM_000271.4(NPC1):c.1211G>A (p.Arg404Gln) NPC1 Mar 24, 2017 MedGen:C3179455,OMIM:257220;MedGen:C0220756,Orphanet:ORPHA646,SNOMED CT:66751000;MedGen:CN517202 Niemann-Pick disease type C1;Niemann-Pick disease, type C;not provided germline;unknown 18 23556358 ACTTTGACCAGCACTTTGGGCCTTTCTTCCGGACGGAGCAGCTCATCATCCGGGCCCCTCT 120074183 18161 NM_000218.2(KCNQ1):c.1034G>A (p.Gly345Glu) KCNQ1 Jan 01, 1996 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MedGen:C0035828,OMIM:192500,Orphanet:ORPHA101016,SNOMED CT:20852007 Congenital long QT syndrome;Long QT syndrome 1 germline 11 2585213 ACGGGAGCCTCCTGTCCATTCCTTCCCAGGGGATTCTTGGCTCGGGGTTTGCCCTGAAGGT 121912843 32488 NM_000094.3(COL7A1):c.6044G>A (p.Gly2015Glu) COL7A1 Jul 24, 1998 MedGen:C0432322,OMIM:131750,Orphanet:ORPHA231568 Generalized dominant dystrophic epidermolysis bullosa germline 3 48575475 AGGGCGACCGTGGAGACCCTGGCCCTCAGGGGCCACCTGGTCTGGCCCTTGGGGAGAGGGG 119478059 19792 NM_020191.2(MRPS22):c.509G>A (p.Arg170His) MRPS22 Dec 01, 2007 MedGen:C2673642,OMIM:611719,Orphanet:ORPHA137908 Combined oxidative phosphorylation deficiency 5 germline 3 139350183 TCCTTGATTATGTTTTTCTATTTTAGGAGCGTTTTATTGTCGTCAGAGAACCAAGTGGCAC 793888508 45741 NM_015631.5(TCTN3):c.940G>A (p.Gly314Arg) TCTN3 Sep 10, 2012 MedGen:C3553758,OMIM:614815 Joubert syndrome 18 germline 10 95685585 ACCTCACAGGCTAATGCTCCTCTGTTGGCTGGAAACACTTGTCAGAATGTAGTTTCTCAGG 886039228 259258 NM_004082.4(DCTN1):c.200G>A (p.Gly67Asp) DCTN1 Sep 29, 2016 MedGen:C1868594,OMIM:168605,Orphanet:ORPHA178509 Perry syndrome germline 2 74378079 GGGTAGGCGTGATTCTGGATGAAGCAAAGGGCAAAAATGATGGAACTGTTCAAGGCAGGAA 137852804 33421 NM_001039523.2(CHRNA1):c.988G>A (p.Val330Ile) CHRNA1 Mar 01, 1999 MedGen:C1837122,OMIM:608930 Congenital myasthenic syndrome 1B, fast-channel germline 2 174750035 GGAAAATACATGCTGTTCACCATGGTGTTCGTCATTGCCTCCATCATCATCACTGTCATCG 587776783 132342 NM_000321.2(RB1):c.1215+1G>A RB1 Mar 10, 2017 MedGen:C0027672,SNOMED CT:699346009;Human Phenotype Ontology:HP:0009919,MeSH:D012175,MedGen:C0035335,OMIM:180200,Orphanet:ORPHA790 Hereditary cancer-predisposing syndrome;Retinoblastoma germline;somatic 13 48373493 CCTTCAGAAAATCTGATTTCCTATTTTAACGTAAGCCATATATGAAACATTATTTATTGTA 587779580 107037 NM_000090.3(COL3A1):c.2905G>A (p.Gly969Arg) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189004338 GCAGGACCACCAGGCATGCCAGGTCCTAGGGGAAGCCCTGGCCCTCAGGGTGTCAAGGTGA 121913355 29013 NM_004333.4(BRAF):c.1406G>A (p.Gly469Glu) BRAF Apr 03, 2017 Human Phenotype Ontology:HP:0030078,MeSH:C538231,MedGen:C0152013;MedGen:C0007112;MedGen:C1275081,Orphanet:ORPHA1340,SNOMED CT:403770008;MedGen:CN029449,OMIM:115150,SNOMED CT:403770008;MeSH:D015179,MedGen:CN236642;Human Phenotype Ontology:HP:0002861,MeSH:D008545,MedGen:C0025202,SNOMED CT:2092003;MeSH:C562393,MedGen:C0151779,SNOMED CT:93655004;Human Phenotype Ontology:HP:0006775,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:ORPHA29073,SNOMED CT:109989006,SNOMED CT:55921005;MedGen:CN166718,Orphanet:ORPHA98733;Human Phenotype Ontology:HP:0030359,MedGen:C0149782;Human Phenotype Ontology:HP:0006739,MedGen:C0553723;Human Phenotype Ontology:HP:0006740,MedGen:C0279680;MedGen:CN517202;MedGen:CN169374 Adenocarcinoma of lung;Adenocarcinoma of prostate;Cardio-facio-cutaneous syndrome;Cardiofaciocutaneous syndrome 1;Colorectal Neoplasms;Malignant melanoma;Malignant melanoma of skin;Multiple myeloma;Rasopathy;Squamous cell carcinoma of lung;Squamous cell carcinoma of the skin;Transitional cell carcinoma of the bladder;not provided;not specified germline;somatic;unknown 7 140781602 TGGGACAAAGAATTGGATCTGGATCATTTGGAACAGTCTACAAGGGAAAGTGGCATGGTAA 863223458 210106 NM_000093.4(COL5A1):c.4474G>A (p.Gly1492Ser) COL5A1 Jan 12, 2014 MedGen:CN517202 not provided germline 9 134820143 CAGGGTCATCCAGGCCTGATCGGGCTCATCGGTCCTCCGGGTGAACAGGGTGAGAAGGGCG 754667801 214831 NM_005689.3(ABCB6):c.1124G>A (p.Arg375Gln) ABCB6 Jan 01, 2013 Gene:541461,MedGen:C1836705,OMIM:609153,Orphanet:ORPHA90044 Pseudohyperkalemia, familial, 2, due to red cell leak germline 2 219216027 GCACAGGGGAGGTGCTGCGGATCGCGGATCGGGGCACATCCAGTGTCACAGGGCTGCTCAG 80338915 23082 NM_003221.3(TFAP2B):c.854G>A (p.Arg285Gln) TFAP2B Sep 08, 2017 MedGen:C1868570,OMIM:169100,Orphanet:ORPHA46627 Char syndrome germline 6 50838007 CCAAATCGAAAAATGGGGGGAGATCTTTGCGAGAAAGGCTAGAAAAAATCGGTTTGAATTT -1 442365 NM_033380.2(COL4A5):c.404G>A (p.Gly135Asp) COL4A5 Mar 31, 2017 MedGen:CN517202 not provided germline X 108571432 ACTCCTTCTAGGGAGAACGTGGATTTCCAGGCAGTCCCGGTTTTCCTGGTTTACAGGGTCC 28939688 22135 NM_001008211.1(OPTN):c.148G>A (p.Glu50Lys) OPTN Feb 08, 2002 MedGen:C1842026 Glaucoma 1, open angle, e germline 10 13109270 CTGCTGCAGCAGATGAAAGAGCTCCTGACCGAGAACCACCAGCTGAAAGGTGAGCAGGGCT 72656396 359683 NM_000089.3(COL1A2):c.983G>A (p.Gly328Asp) COL1A2 Oct 24, 2016 MedGen:CN517202 not provided germline 7 94409769 CTGGGGCTCCCGGCCTCCCTGGACCCCGCGGTATTCCTGGCCCTGTTGGTGCTGCCGGTGC 863225009 213852 NM_004006.2(DMD):c.7817G>A (p.Trp2606Ter) DMD Mar 07, 2013 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Duchenne muscular dystrophy germline X 31679430 TAGGACAGGCCAGAGCCAAGCTTGAGTCATGGAAGGAGGGTCCCTATACAGTAGATGCAAT 121913132 29884 NM_000183.2(HADHB):c.182G>A (p.Arg61His) HADHB Oct 05, 2017 MedGen:C0342786,OMIM:609015,SNOMED CT:237999008;MedGen:CN517202 Mitochondrial trifunctional protein deficiency;not provided germline 2 26263452 TAAGGAATGTTGTGGTGGTGGATGGTGTTCGCACTCCATTTTTGCTGTCTGGCACTTCGTA 180177314 200634 NM_012203.1(GRHPR):c.494G>A (p.Gly165Asp) GRHPR May 26, 2017 MedGen:C0020501,Orphanet:ORPHA416,SNOMED CT:17901006;MedGen:C0268165,OMIM:260000,Orphanet:ORPHA93599,SNOMED CT:40951006 Primary hyperoxaluria;Primary hyperoxaluria, type II germline 9 37429732 GGAACGAGACATGGACTCTCCTTGCTCTAGGCCAGGCCATTGCTCGGCGTCTGAAACCATT 118203419 58238 NM_000368.4(TSC1):c.663+1G>A TSC1 Oct 12, 2016 MedGen:C0005684,OMIM:109800,Orphanet:ORPHA157980,SNOMED CT:399326009;MedGen:CN517202 Malignant tumor of urinary bladder;not provided germline 9 132921818 AACCTGGAGACTTTTGAAGAAGTGGTCAAGGTAAATTGAAACTGCTTGTTTGTTTGCTACT 397514360 36347 NM_000060.4(BTD):c.459G>A (p.Glu153Glu=) BTD Nov 28, 2016 MedGen:C0220754,OMIM:253260,Orphanet:ORPHA79241,SNOMED CT:8808004;MedGen:CN517202 Biotinidase deficiency;not provided germline 3 15642057 CCTGGAGCCTCACCGCTTCAATGACACAGAGGTGATTCCTGCCTTTTTCCTCAGTAGGCTG 119461976 17958 NM_024077.4(SECISBP2):c.1619G>A (p.Arg540Gln) SECISBP2 Nov 01, 2005 MedGen:C1864761,OMIM:609698,Orphanet:ORPHA171706 Thyroid hormone metabolism, abnormal germline 9 89348095 ATTTAATTTTTAAGATTATTTTGAAAGAACGGCAAGAGAGAAAGCAGCGTCTCCAAGAAAA 398124321 101692 NM_017780.3(CHD7):c.5405-7G>A CHD7 Sep 08, 2017 MedGen:C0265354,OMIM:214800,Orphanet:ORPHA138,SNOMED CT:47535005;MedGen:CN517202 CHARGE association;not provided de novo;germline;not applicable 8 60850486 TCTGTGTGTTTTCTGTGCACGGATGGGCACGGCACAGGCTATGAGAAGTACAACTCCATGC 1057520413 366036 NM_021007.2(SCN2A):c.781G>A (p.Val261Met) SCN2A Dec 22, 2016 MedGen:CN517202 not provided germline 2 165310406 GTCATGATCTTGACTGTGTTCTGTCTAAGCGTGTTTGCGCTAATAGGATTGCAGTTGTTCA 776743373 265010 NM_000276.3(OCRL):c.940-11G>A OCRL Oct 19, 2017 MedGen:C1845167,OMIM:300555,Orphanet:ORPHA93623;MedGen:C0028860,OMIM:309000,Orphanet:ORPHA534,SNOMED CT:79385002;MedGen:CN517202 Dent disease 2;Lowe syndrome;not provided de novo;germline X 129562373 GGTATTAACATTAACCTTTTGTAACTCCCCGGAACTCATAGGTTCAACTGGTGCGCCTTGT 121912851 32497 NM_000094.3(COL7A1):c.7957G>A (p.Gly2653Arg) COL7A1 Apr 01, 1996 MedGen:C0079474,OMIM:226600,SNOMED CT:48528004 Recessive dystrophic epidermolysis bullosa germline 3 48567736 CAGGGAGAAGCTGGTCCCCCAGGCCGCCCCGGGCTGGCAGGACACAAAGGAGAGATGGTGA 121917853 23906 NM_002181.3(IHH):c.391G>A (p.Glu131Lys) IHH Sep 01, 2009 Human Phenotype Ontology:HP:0009371,MedGen:C1862151,OMIM:112500,Orphanet:ORPHA93388 Type A1 brachydactyly germline 2 219057619 CAGTGGCCCGGTGTGAAGCTGCGGGTGACCGAGGGCTGGGACGAGGACGGCCACCACTCAG 41276738 15335 NM_000552.4(VWF):c.2561G>A (p.Arg854Gln) VWF Jul 18, 2017 MedGen:CN517202;MedGen:CN169374;MedGen:C1264039,OMIM:193400,Orphanet:ORPHA166078,SNOMED CT:128106003;MedGen:C1264040,OMIM:613554,Orphanet:ORPHA166081,SNOMED CT:128107007;MedGen:C1282975,Orphanet:ORPHA166093,SNOMED CT:359732009;MedGen:C0042974,Orphanet:ORPHA903,SNOMED CT:128105004 not provided;not specified;von Willebrand disease type 1;von Willebrand disease type 2;von Willebrand disease type 2N;von Willebrand disorder germline 12 6034812 CCATGACTGCTCCTAGTGTCTGTCAGGACCGGAAGTGGAACTGCACAGACCATGTGTGTGA 372221490 213817 NM_213599.2(ANO5):c.762+1G>A ANO5 Feb 05, 2016 MedGen:C1969785,OMIM:611307,Orphanet:ORPHA206549 Limb-girdle muscular dystrophy, type 2L germline 11 22236277 ACTTACTCATCTGCCTATCCACTCCATGATGTATGTATAGGTTTGATTGTGAAAATCTGAG 180177236 200511 NM_000030.2(AGXT):c.547G>A (p.Asp183Asn) AGXT Nov 27, 2014 MedGen:C0268164,OMIM:259900,Orphanet:ORPHA93598,SNOMED CT:65520001 Primary hyperoxaluria, type I germline 2 240873001 CTCTCCAGGTACAAGTGCCTGCTCCTGGTGGATTCGGTGGCATCCCTGGGCGGGACCCCCC 104894913 25545 NM_020061.5(OPN1LW):c.1013G>A (p.Gly338Glu) OPN1LW Jun 07, 2002 Human Phenotype Ontology:HP:0011522,MedGen:C0155015,OMIM:303900,SNOMED CT:51445007 Protan defect germline X 154158844 AGTTTCGAAACTGCATCTTGCAGCTTTTCGGGAAGAAGGTTGACGATGGCTCTGAACTCTC 201555148 441908 NM_000339.2(SLC12A3):c.506-1G>A SLC12A3 Jan 07, 2015 MedGen:CN517202 not provided germline 16 56869728 GCCCTGCCTAAGCTTTGGGTGCCCCCTGCAGTCCTGACCTGGATCATCATCCTGCTGTCGG 398124544 102394 NM_152419.2(HGSNAT):c.1250+1G>A HGSNAT Apr 28, 2015 MedGen:CN517202 not provided germline 8 43191596 ATTCCTCCTGCCAGTCCCTGGGTGCCCTACGTAAGCGAACCCCTGGGGGTCATCCCTTGTG 587777259 131909 NM_001457.3(FLNB):c.517G>A (p.Ala173Thr) FLNB Mar 01, 2014 MedGen:C0265283,OMIM:108720,Orphanet:ORPHA1190 Atelosteogenesis type 1 germline 3 58077270 CAGAACTGGCAAGACGGCAAAGCCCTGGGAGCCCTGGTAGACAGCTGTGCTCCAGGTAAGT 121434588 29835 NM_000876.3(IGF2R):c.4391G>A (p.Gly1464Glu) IGF2R Oct 06, 2017 MedGen:C2239176,OMIM:114550,Orphanet:ORPHA88673,SNOMED CT:187769009,SNOMED CT:25370001 Hepatocellular carcinoma somatic 6 160070006 AATACGTTGATGGCGACTTATGTCCAGATGGGATTCGGAAAAAGTCAACCACCATCCGATT 62508698 15619 NM_000277.2(PAH):c.838G>A (p.Glu280Lys) PAH Aug 04, 2017 MedGen:C0031485,OMIM:261600,Orphanet:ORPHA716,SNOMED CT:154735006;MedGen:CN517202 Phenylketonuria;not provided germline;unknown 12 102852819 AGACATGGATCCAAGCCCATGTATACCCCCGAACCGTGAGTACTGTCCTCCAGCTACCAGT 201938124 17695 NM_198428.2(BBS9):c.1789+1G>A BBS9 Oct 25, 2016 MedGen:C1859567,OMIM:615986;MedGen:CN517202 Bardet-Biedl syndrome 9;not provided germline 7 33367863 GAATTACTGTTCTTGCTTCCAAAACTTCTCGTAAGTAAAACCATGTTATCATTGCTTTTTA 63749869 28021 NM_000540.2(RYR1):c.14582G>A (p.Arg4861His) RYR1 Jun 02, 2017 MedGen:C0751951,OMIM:117000,Orphanet:ORPHA597,SNOMED CT:43152001;MedGen:C2674259;MedGen:CN239331;MedGen:CN517202 Central core disease;Neuromuscular disease, congenital, with uniform type 1 fiber;RYR1-Related Disorders;not provided germline;unknown 19 38580440 TGTACACCGTGGTGGCCTTCAACTTCTTCCGCAAGTTCTACAACAAGAGCGAGGATGAGGA 587784048 168322 NM_133433.3(NIPBL):c.771+1G>A NIPBL Oct 05, 2015 MedGen:CN029798,OMIM:122470 Cornelia de Lange syndrome 1 de novo;germline 5 36971037 CTACACATGGTGCACAGGCTAAGTAGTGACGTATGTAATATATTATCATTAAGGTGATAAA 1057520768 372039 NM_017890.4(VPS13B):c.292-1G>A VPS13B Jun 04, 2015 MedGen:CN517202 not provided germline 8 99096311 TTTTCTTTTTCTTTCTTTAAAATAAAAATAGGATGACCATGAAAGCTGTGGTTCTAATTCT 398123011 48564 NM_001199835.1(SNX10):c.152G>A (p.Arg51Gln) SNX10 Apr 01, 2012 MedGen:C3554478,OMIM:615085 Osteopetrosis, autosomal recessive 8 germline 7 26364575 TGTGTTTTACAATGAAAACATCCTGTGTACGAAGAAGATATAGAGAATTCGTGTGGCTGAG 104886179 35859 NM_000495.4(COL4A5):c.2404G>A (p.Gly802Arg) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108614919 AAACTGTATTTATTTCTTAAAGGTGATGTTGGACCAAATGGACAACCTGGACCAATGGGAC 367543074 51104 NM_152490.4(B3GALNT2):c.802G>A (p.Val268Met) B3GALNT2 Jun 27, 2013 MedGen:C3554638,OMIM:615181;MedGen:CN517202 Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type a, 11;not provided germline;unknown 1 235465675 GGTGCATTGCCTCATGAATTCTTGGAAGGTGTGGAGGGAGTTGCAGGTGGTTTTATATATA 387906917 39455 NM_030928.3(CDT1):c.1385G>A (p.Arg462Gln) CDT1 Mar 14, 2017 MedGen:C3151120,OMIM:613804;MedGen:CN517202 Meier-Gorlin syndrome 4;not provided germline 16 88807390 AACGGCTGCCTGAGCTGGCCCGCGTGCTGCGGAGCGTCTTTGTGTCCGAACGCAAGCCTGC 104893691 23360 NM_000388.3(CASR):c.346G>A (p.Ala116Thr) CASR May 01, 1996 MedGen:C0342345,OMIM:601198 Hypocalcemia, autosomal dominant 1 germline 3 122257241 AAGGCCTTGGAAGCCACCCTGAGTTTTGTTGCTCAAAACAAAATTGATTCTTTGAACCTTG 200967229 237667 NM_000350.2(ABCA4):c.4352+1G>A ABCA4 Jan 01, 2016 MeSH:C535804,MedGen:C1855465,OMIM:248200 Stargardt disease 1 germline;unknown 1 94030427 CAACCGCTGCCTGAAGGAAGGGTGGCTTCCGTAAGTGCCTACGCGCCCCTGTCCTAAGAAG 121912656 27394 NM_000546.5(TP53):c.734G>A (p.Gly245Asp) TP53 May 11, 2017 Human Phenotype Ontology:HP:0030078,MeSH:C538231,MedGen:C0152013;MedGen:C0007112;MedGen:C0278701;Human Phenotype Ontology:HP:0010796,MedGen:C0677865;Human Phenotype Ontology:HP:0011459,MedGen:C0152018,Orphanet:ORPHA70482;MeSH:D015179,MedGen:CN236642;Human Phenotype Ontology:HP:0100843,MeSH:D005909,MedGen:C0017636,SNOMED CT:63634009;MedGen:C2239176,OMIM:114550,Orphanet:ORPHA88673,SNOMED CT:187769009,SNOMED CT:25370001;MedGen:C0027672,SNOMED CT:699346009;MedGen:C0085390,Orphanet:ORPHA524,SNOMED CT:428850001;Gene:553989,MedGen:C1835398,OMIM:151623;Human Phenotype Ontology:HP:0030692,MeSH:D001932,MedGen:C0006118,SNOMED CT:126952004;Human Phenotype Ontology:HP:0100013,MeSH:D001943,MedGen:C1458155,Orphanet:ORPHA180250,SNOMED CT:126926005;MedGen:C0279663;Human Phenotype Ontology:HP:0006725,MedGen:C0281361;Human Phenotype Ontology:HP:0030359,MedGen:C0149782;MeSH:C535575,MedGen:C1168401,OMIM:275355,Orphanet:ORPHA67037;Human Phenotype Ontology:HP:0006740,MedGen:C0279680;MedGen:C0280630 Adenocarcinoma of lung;Adenocarcinoma of prostate;Adenocarcinoma of stomach;Brainstem glioma;Carcinoma of esophagus;Colorectal Neoplasms;Glioblastoma;Hepatocellular carcinoma;Hereditary cancer-predisposing syndrome;Li-Fraumeni syndrome;Li-Fraumeni syndrome 1;Neoplasm of brain;Neoplasm of the breast;Ovarian Serous Cystadenocarcinoma;Pancreatic adenocarcinoma;Squamous cell carcinoma of lung;Squamous cell carcinoma of the head and neck;Transitional cell carcinoma of the bladder;Uterine Carcinosarcoma germline;somatic 17 7674229 ACTACATGTGTAACAGTTCCTGCATGGGCGGCATGAACCGGAGGCCCATCCTCACCATCAT 879255555 247553 NM_018052.3(VAC14):c.1528+1G>A VAC14 Jul 28, 2016 MedGen:C4310743,OMIM:617054 Striatonigral degeneration, childhood-onset germline 16 70744422 CTGGCAGAGCCGGCCTACTGAACACCTCTGGTAAGTCTTCTCCTGAAGGTTCTAGCCTCAG -1 452274 NM_145860.1(PDCD10):c.474+5G>A PDCD10 Mar 21, 2017 MedGen:C1864040,OMIM:603285 Cerebral cavernous malformations 3 germline 3 167687610 AGAAATATCAATACCAGAACCGCAGGGTACGTTTAGTAGAAGCCTTGCTAGTTGACACCCT 121908636 21363 NM_000050.4(ASS1):c.40G>A (p.Gly14Ser) ASS1 Apr 04, 2013 MedGen:C0175683,OMIM:215700,Orphanet:ORPHA187 Citrullinemia type I germline 9 130452268 AAAGGCTCCGTGGTTCTGGCCTACAGTGGCGGCCTGGACACCTCGTGCATCCTCGTGTGGC 1057518851 360829 NM_001267550.2(TTN):c.74567G>A (p.Trp24856Ter) TTN Jun 29, 2014 Human Phenotype Ontology:HP:0003198,MedGen:C0026848 Myopathy unknown 2 178571565 TTGAGAAACGGGACACTTCCACAACCACCTGGCAAATTGTATCAGCTACAGTTGCAAGGAC 80338922 34540 NM_024577.3(SH3TC2):c.1178-1G>A SH3TC2 Mar 31, 2008 MedGen:C1866636,OMIM:601596,Orphanet:ORPHA99949 Charcot-Marie-Tooth disease, type 4C not provided 5 149028555 CAAGGTTGCTCAACTTTGCCTGTCCTTACAGCATCCCAGCCTGAAGGTTTCAAGGAGGTCA 368148362 223762 NM_001012339.2(DNAJC21):c.983+1G>A DNAJC21 Dec 17, 2015 MedGen:C2986691 Inherited bone marrow failure syndrome unknown 5 34941184 ATGTGACAAATCGTTCAAGACAGAAAAGGCGTAAGTTTATTAATTTAATTTAATTTAATTT 72650701 426965 NM_001171.5(ABCC6):c.2162G>A (p.Trp721Ter) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16182497 TGTGCTTCGGGCAGGAGCTGGACCCACCCTGGCTGGAGAGAGTACTAGAAGCCTGTGCCCT 28935493 25781 NM_000169.2(GLA):c.1025G>A (p.Arg342Gln) GLA Feb 03, 2017 Human Phenotype Ontology:HP:0001071,MedGen:C0002986,OMIM:301500,Orphanet:ORPHA324,SNOMED CT:16652001 Fabry disease germline;unknown X 101398074 TTCAGGGAGACAACTTTGAAGTGTGGGAACGACCTCTCTCAGGCTTAGCCTGGGCTGTAGC 281874706 35599 NM_000495.4(COL4A5):c.286G>A (p.Gly96Arg) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108568638 GGATTTTATTTCTTCTTATAGGGTCCTCCTGGACTTCCTGGATTTCCAGGGACACCAGGTC 1060503769 398031 NM_003002.3(SDHD):c.315G>A (p.Trp105Ter) SDHD Jun 14, 2016 MedGen:C1868633,OMIM:168000;Human Phenotype Ontology:HP:0002666,MedGen:C0031511,OMIM:171300 Paragangliomas 1;Pheochromocytoma germline 11 112094805 TTGATGTTATGATTTTTTCTTTTTCTTTAGGGGCCTTGGACAAGTTGTTACTGACTATGTT 74315309 19227 NM_080738.3(EDARADD):c.424G>A (p.Glu142Lys) EDARADD Dec 29, 2011 MedGen:C0406702,OMIM:224900,Orphanet:ORPHA248,SNOMED CT:27025001;MedGen:C3539920,OMIM:614941 Autosomal recessive hypohidrotic ectodermal dysplasia syndrome;Ectodermal dysplasia 11b, hypohidrotic/hair/tooth type, autosomal recessive germline 1 236482455 TTTGCAAGCAAATGGGGGATGTCCTATGACGAATTGTGCTTCCTGGAGCAGAGGCCACAGA 772294726 487064 NM_174889.4(NDUFAF2):c.221G>A (p.Trp74Ter) NDUFAF2 Sep 29, 2016 MedGen:C0023264,OMIM:256000,Orphanet:ORPHA506,SNOMED CT:29570005 Leigh syndrome germline 5 61098995 ACATTTAAATATTATTTTTCTTTCTAGCTTGGATTAGAAGAACAAGAAAGACTCCACCTAC 121434286 18595 NM_000086.2(CLN3):c.883G>A (p.Glu295Lys) CLN3 Aug 01, 2013 MedGen:C4017059;MedGen:C0751383,OMIM:204200,Orphanet:ORPHA79264,SNOMED CT:61663001 Ceroid lipofuscinosis, neuronal, 3, protracted;Juvenile neuronal ceroid lipofuscinosis germline 16 28482500 ATTGTTCCCTTGGTCGTAGTTTACTTTGCCGAGTATTTCATTAACCAGGGACTTGTAAGTG 386834264 76974 NM_000720.3(CACNA1D):c.1208G>A (p.Gly403Asp) CACNA1D Jan 14, 2015 MedGen:C3809609,OMIM:615474,Orphanet:ORPHA369929;MedGen:CN517202 Primary aldosteronism, seizures, and neurologic abnormalities;not provided de novo;germline 3 53673804 GCTCATTTTTCGTCCTTAACCTGGTTCTTGGTGTCCTTAGTGGGTAAGCAGTCGGATCCGT 397516955 54113 NM_004415.3(DSP):c.699G>A (p.Trp233Ter) DSP Oct 30, 2017 MedGen:C1843896,OMIM:607450;Human Phenotype Ontology:HP:0001638,MedGen:C0878544,Orphanet:ORPHA167848,SNOMED CT:85898001;MedGen:CN517202 Arrhythmogenic right ventricular cardiomyopathy, type 8;Cardiomyopathy;not provided germline 6 7562753 CATCCACAACTCCATCGGCGACTATCGCTGGCAGCTGGACAAAATCAAAGCCGACCTGGTA 59886214 29555 NM_170707.3(LMNA):c.1821G>A (p.Val607=) LMNA Jan 08, 2015 MedGen:C0033300,OMIM:176670,Orphanet:ORPHA740,SNOMED CT:238870004;MedGen:CN517202 Hutchinson-Gilford syndrome;not provided germline 1 156138610 GGCATCTGCCAGCGGCTCAGGAGCCCAGGTGGGCGGACCCATCTCCTCTGGCTCTTCTGCC -1 430993 NM_000426.3(LAMA2):c.7452-1G>A LAMA2 Jun 07, 2017 MedGen:C1263858,OMIM:607855,Orphanet:ORPHA258,SNOMED CT:111503008 Merosin deficient congenital muscular dystrophy inherited 6 129478692 TGCTTTTGCTTTTCATTTGACTATTCAATAGGCCAGAAGTAAATCTGAAGAAATATTCCGG 398124646 102600 NM_001966.3(EHHADH):c.7G>A (p.Glu3Lys) EHHADH Jan 09, 2014 MedGen:C3810100,OMIM:615605 Fanconi renotubular syndrome 3 germline 3 185254016 GGTGCCCTCGGTGATAGAGGAAACATGGCCGAGTATACGCGGCTGCACAACGCCTTGGCGC 773599043 359369 NM_000350.2(ABCA4):c.6816+1G>A ABCA4 Aug 18, 2016 MedGen:CN517202 not provided germline 1 93996108 CGAGCTGCTGGAGCCAGTCGACAAGCCCAGGTACCCCTGCTGCTTATGCAGTCCACAGCTT 397516349 52554 NM_000363.4(TNNI3):c.434G>A (p.Arg145Gln) TNNI3 Sep 29, 2017 Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Hypertrophic cardiomyopathy;Primary familial hypertrophic cardiomyopathy;not provided germline 19 55154145 TTCGAGGCAAGTTTAAGCGGCCCACCCTGCGGAGAGTGAGGATCTCTGCAGATGCCATGAT 864321714 217278 NM_006086.3(TUBB3):c.185G>A (p.Arg62Gln) TUBB3 Jan 14, 2016 MedGen:C2748801,OMIM:600638 Fibrosis of extraocular muscles, congenital, 3a, with or without extraocular involvement germline 16 89933486 CTCTCCCCTCAGCTCACAAGTACGTGCCTCGAGCCATTCTGGTGGACCTGGAACCCGGAAC 267606831 31265 NM_004960.3(FUS):c.1520G>A (p.Gly507Asp) FUS Apr 01, 2010 MedGen:C1842675,OMIM:608030 Amyotrophic lateral sclerosis type 6 germline 16 31191089 GCCGGGGTGGTGGGGACAGAGGTGGCTTTGGCCCTGGCAAGATGGATTCCAGGTAAGACTT 111033414 57527 NM_206933.2(USH2A):c.11048-1G>A USH2A Jun 13, 2010 MedGen:C1848634,OMIM:276901 Usher syndrome, type 2A germline 1 215759844 CAATAAAACCTCATTGCGTTATTCTTGCCAGGAGTTTGGGTGACACCTCGACACATTATCA 786201808 185288 NM_032043.2(BRIP1):c.1005G>A (p.Trp335Ter) BRIP1 May 13, 2014 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 17 61801388 ACAGACTTTCCAAGGGATGTGCAAAGCCTGGGATATAGAAGAACTTGTCAGCCTGGGGAAG 371518124 102484 NM_183050.3(BCKDHB):c.509G>A (p.Arg170His) BCKDHB May 13, 2015 MedGen:C0024776,OMIM:248600,SNOMED CT:27718001;MedGen:CN517202 Maple syrup urine disease;not provided germline 6 80168906 TTGTTAATGAAGCTGCCAAGTATCGCTATCGCTCTGGGGATCTTTTTAACTGTGGAAGCCT 121908061 19190 NM_000173.6(GP1BA):c.1077G>A (p.Trp359Ter) GP1BA Mar 01, 1990 MedGen:C3278148 Bernard-Soulier syndrome, type A1 germline 17 4933681 TAAGGAGCAGACCACATTCCCACCTAGATGGACCCCAAATTTCACACTTCACATGGAATCC 886041767 264909 NM_001111125.2(IQSEC2):c.2984G>A (p.Arg995Gln) IQSEC2 Jun 21, 2016 MedGen:CN517202 not provided germline X 53241815 ACCGCCCCCAGAGGCTAGGGTTGCATCAGCGGGAGGTCTTCCTCTTCAATGATCTCCTTGT 1057523747 485845 NM_000044.4(AR):c.2258G>A (p.Arg753Gln) AR Jun 26, 2009 MedGen:C0039585,OMIM:300068,SNOMED CT:12313004 Androgen resistance syndrome germline X 67717562 TGGGGCTCATGGTGTTTGCCATGGGCTGGCGATCCTTCACCAATGTCAACTCCAGGATGCT 199422162 34436 NM_018136.4(ASPM):c.4074G>A (p.Trp1358Ter) ASPM Sep 01, 2009 MedGen:C1837501,OMIM:608716 Primary autosomal recessive microcephaly 5 not provided 1 197105177 TGTCCTTTCTTACCTTTTCCAGGGATATTGGAGAAGATATTCCACTAGACAAAGATTTCTG 121909601 31963 NM_000628.4(IL10RB):c.477G>A (p.Trp159Ter) IL10RB Nov 19, 2009 Gene:100270799,MedGen:C2675508,OMIM:612567 Inflammatory bowel disease 25, autosomal recessive germline 21 33279897 TAACTCATGGACTTATAATGTGCAATACTGGAAAAACGGTACTGATGAAAAGGTAAGGTTG 878853238 237623 NM_016239.3(MYO15A):c.8467G>A (p.Asp2823Asn) MYO15A Feb 19, 2016 MedGen:C1838263,OMIM:600316 Deafness, autosomal recessive 3 germline 17 18156202 CATGCCACCGGCCCATCCTCCAGCTTTGCAGATATCCTGTTTGTGACCATGCCCTCCCAGA 879255175 246565 NM_000527.4(LDLR):c.2311+1G>A LDLR Mar 25, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline;not applicable 19 11123345 CGGTGGAGATAGTGACAATGTCTCACCAAGGTAAAGACTGGGCCCTCCCTAGGCCCCTCTT 81002798 67270 NM_000059.3(BRCA2):c.8487+1G>A BRCA2 May 26, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202;MedGen:CN169374 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided;not specified germline 13 32370558 GTAATTATTCAAAGAGCATACCCTATACAGGTATGATGTATTCTTGAAACTTACCATATAT 397514340 36320 NM_000060.4(BTD):c.190G>A (p.Glu64Lys) BTD Dec 04, 2012 MedGen:C0220754,OMIM:253260,Orphanet:ORPHA79241,SNOMED CT:8808004 Biotinidase deficiency not provided 3 15635569 GAGGCTGAATATTATGTGGCTGCCGTGTATGAGCATCCATCCATCCTGAGTCTGAACCCTC 121912839 32486 NM_000094.3(COL7A1):c.6859G>A (p.Gly2287Arg) COL7A1 May 28, 2015 MedGen:C0432322,OMIM:131750,Orphanet:ORPHA231568;MedGen:C1843761,OMIM:607523;MedGen:C0079474,OMIM:226600,SNOMED CT:48528004;MedGen:CN517202 Generalized dominant dystrophic epidermolysis bullosa;Nail disorder, nonsyndromic congenital, 8;Recessive dystrophic epidermolysis bullosa;not provided germline 3 48572712 TAGGGGTCACCAGGTCTGCCTGGCCCTGTCGGACCTAAAGGAGAACCTGGCCCCACGGGGG 121909040 22255 NM_000492.3(CFTR):c.3746G>A (p.Gly1249Glu) CFTR Jul 01, 1994 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline 7 117642466 AGGTGGGCCTCTTGGGAAGAACTGGATCAGGGAAGAGTACTTTGTTATCAGCTTTTTTGAG 879255522 247394 NM_007174.2(CIT):c.1111+1G>A CIT Sep 02, 2016 MedGen:C4310723,OMIM:617090;MedGen:C3711387,Orphanet:ORPHA2512 Microcephaly 17, primary, autosomal recessive;Primary autosomal recessive microcephaly germline;unknown 12 119822819 CTAAAATTGACTGGAACAACATTCGTAACTGTAAGTAGGGCTGTTTTCCTTAATTTGGGAT 121918594 28011 NM_000540.2(RYR1):c.7373G>A (p.Arg2458His) RYR1 Oct 18, 2013 MedGen:C0751951,OMIM:117000,Orphanet:ORPHA597,SNOMED CT:43152001;MedGen:CN031421,OMIM:145600;MedGen:CN517202 Central core disease;Malignant hyperthermia, susceptibility to, 1;not provided germline;unknown 19 38500655 GTGAGGCCCTGCGGATCCGCGCCATCCTCCGCTCCCTTGTGCCCTTGGAGGACCTTGTGGG 534237033 193296 NM_014639.3(TTC37):c.2808G>A (p.Trp936Ter) TTC37 Aug 22, 2017 MedGen:CN034858,OMIM:222470;MedGen:CN517202 Trichohepatoenteric syndrome 1;not provided germline 5 95512589 GACTGAAGGAGCATTAGGTTATGCGTATTGGGTCTGCACAACATTGCAAGATAAAAGCAAC 587776402 36055 NM_000495.4(COL4A5):c.4199-1G>A COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108686030 CATATTTGAATGCCTCATTCTTTTCCTGTAGGTCCAACTGGCCCTCCAGGAGATCCTGGAC 1057517713 359741 NM_017780.3(CHD7):c.5315G>A (p.Trp1772Ter) CHD7 Oct 26, 2016 MedGen:CN517202 not provided germline 8 60849065 AAATGTTGTCTTTCAGTGAAGCCGATGTGTGGATCCCTGAACCTTTCCATGCTGAAGTTCC 587777771 166024 NM_152296.4(ATP1A3):c.2452G>A (p.Glu818Lys) ATP1A3 May 24, 2017 MedGen:C3553788,OMIM:614820;MedGen:C1832466,OMIM:601338,Orphanet:ORPHA1171;MedGen:C1868681,OMIM:128235,Orphanet:ORPHA71517;MeSH:D030342,MedGen:C0950123;MedGen:CN517202 Alternating hemiplegia of childhood 2;Cerebellar ataxia, areflexia, pes cavus, optic atrophy and sensorinural hearing loss;Dystonia 12;Inborn genetic diseases;not provided de novo;germline 19 41970275 CCTGCCATCTCACTGGCGTACGAGGCTGCCGAAAGCGACATCATGAAGAGACAGCCCAGGA 81002874 262840 NM_000059.3(BRCA2):c.7977-1G>A BRCA2 Oct 02, 2015 MedGen:C2675520,OMIM:612555 Breast-ovarian cancer, familial 2 germline 13 32363178 CTAAAATATGCATTTTTGTTTTCACTTTTAGATATGATACGGAAATTGATAGAAGCAGAAG 1064796970 409497 NM_000548.4(TSC2):c.4936G>A (p.Val1646Met) TSC2 Mar 18, 2017 MedGen:C1860707,OMIM:613254;MedGen:CN517202 Tuberous sclerosis 2;not provided germline 16 2086818 GACAAGAAGCGCCACCTGGGCAACGACTTTGTGTCCATTGTCTACAATGACTCCGGTGAGG 587779279 94908 NM_000179.2(MSH6):c.3647-1G>A MSH6 Feb 13, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Hereditary cancer-predisposing syndrome;Lynch syndrome germline 2 47806203 TTACTTCCTTATGCATATTTTACTTTAACAGGAAGAGGTACTGCAACATTTGATGGGACGG 56025238 16955 NM_001017922.1(ERMAP):c.169G>A (p.Gly57Arg) ERMAP Jan 15, 2003 na SCIANNA BLOOD GROUP SYSTEM, SC:-1,2 germline 1 42830851 GAGCTGCTCTGCCCTCTCTCCCTCTGGCCCGGGACGGTACCCAAGGAGGTGAGGTGGCTGC 137854464 31476 NM_000138.4(FBN1):c.7339G>A (p.Glu2447Lys) FBN1 Dec 22, 2016 MedGen:C1851286,OMIM:129600;MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:CN517202 Ectopia lentis, isolated, autosomal dominant;Marfan syndrome;not provided de novo;germline 15 48425483 CGCTGTATTTCTTTGATCATAGATCTGAACGAGTGCAACCAGGCTCCCAAACCCTGCAATT 397515539 76543 NM_001287.5(CLCN7):c.643G>A (p.Gly215Arg) CLCN7 Jun 20, 2013 MedGen:C1969106,OMIM:611490 Osteopetrosis autosomal recessive 4 not provided 16 1459139 GGAATCCCCCAGATCAAGTGCTTCCTCAACGGGGTGAAGATCCCCCACGTGGTGCGGCTCA 150619347 226233 NM_022786.2(ARV1):c.294+1G>A ARV1 Oct 20, 2016 MedGen:CN235539;MedGen:C4310762,OMIM:617020 ARV1-related condition;Epileptic encephalopathy, early infantile, 38 biparental;germline 1 230988440 AGACATATTCTTTTCAATACTCAAATAAATGTAAGTTGTGATAATTTCATTTTTTAATTTT 587776559 18318 NM_024529.4(CDC73):c.238-1G>A CDC73 Feb 01, 2005 MedGen:C1704981,OMIM:145001,Orphanet:ORPHA99880 Hyperparathyroidism 2 unknown 1 193130173 TTTCATATCTCATTTAAAATTTTGGTTTTAGACTGAAAATATTCCTGTGGTTAGAAGACCT 80338921 34553 NM_024577.3(SH3TC2):c.920G>A (p.Trp307Ter) SH3TC2 Mar 31, 2008 MedGen:C1866636,OMIM:601596,Orphanet:ORPHA99949 Charcot-Marie-Tooth disease, type 4C not provided 5 149038376 TCATCGGCTTTGTCATACCTGGGCTTCAGTGGTTCATTGGAAAGTCGACAAGTTCAGGACA 80358456 65843 NM_000059.3(BRCA2):c.1689G>A (p.Trp563Ter) BRCA2 Jul 13, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome germline;unknown 13 32333167 ATGTCCAAATTTAATTGATAATGGAAGCTGGCCAGCCACCACCACACAGAATTCTGTAGCT 147014855 224832 NM_030780.4(SLC25A32):c.425G>A (p.Trp142Ter) SLC25A32 Oct 05, 2016 MedGen:C4225187,OMIM:616839 Exercise intolerance, riboflavin-responsive germline 8 103403291 CCATGACCCTCTGCATTACAAACCCATTATGGGTAACAAAAACTCGCCTTATGTTACAGTA 63750758 426876 NM_001171.5(ABCC6):c.3381G>A (p.Met1127Ile) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16163118 AGCCAGCTACTCGTCTGTCTGCTCCCACATGGCTGAGACGTTCCAGGGCAGCACAGTGGTC 750325275 214736 NR_023343.1(RNU4ATAC):n.16G>A RNU4ATAC Nov 02, 2015 Gene:57788,MedGen:C1846059,OMIM:616651,Orphanet:ORPHA353298 Roifman syndrome germline 2 121530895 GGGACTTTCTATTATAACCATCCTTTTCTTGGGGTTGCGCTACTGTCCAATGAGCGCATAG 397514529 48140 NM_001139.2(ALOX12B):c.1180G>A (p.Glu394Lys) ALOX12B Apr 01, 2007 MedGen:C1855792,OMIM:242100 Autosomal recessive congenital ichthyosis 2 germline 17 8077085 TGGGTACGCTATGCGGAGTTCTACAGCCACGAGGCCATCGCCCACCTGCTGGAGACACACC 587777009 70568 NM_006494.3(ERF):c.194G>A (p.Arg65Gln) ERF Mar 01, 2013 Human Phenotype Ontology:HP:0004443,MedGen:C1833340,OMIM:600775 Craniosynostosis 4 germline 19 42250394 TCGTCATCAAAGACCCTGATGAGGTGGCCCGGCTGTGGGGCGTTCGCAAGTGCAAGCCCCA 587779518 107139 NM_000090.3(COL3A1):c.665G>A (p.Gly222Asp) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188989424 AGGGCCCTCCAGGACCTCCTGGTGCTATAGGTCCATCTGGTCCTGCTGGAAAAGATGTAAG 1060500187 392351 NM_000090.3(COL3A1):c.3833G>A (p.Trp1278Ter) COL3A1 Dec 11, 2016 MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189010187 TTCTTTTTTGTGACTATTCAGGAGAATACTGGGTTGACCCTAACCAAGGATGCAAATTGGA 770981889 430989 NM_001918.3(DBT):c.902G>A (p.Arg301His) DBT Jun 07, 2017 MedGen:C0024776,OMIM:248600,SNOMED CT:27718001 Maple syrup urine disease inherited 1 100214854 GAGAAGAATTAAAACCCATTGCATTTGCTCGTGGAATTAAACTCTCCTTTATGCCTTTCTT 727503948 177435 NM_000169.2(GLA):c.730G>A (p.Asp244Asn) GLA Mar 06, 2014 Human Phenotype Ontology:HP:0001071,MedGen:C0002986,OMIM:301500,Orphanet:ORPHA324,SNOMED CT:16652001 Fabry disease germline X 101398856 GATTCCTGGAAAAGTATAAAGAGTATCTTGGACTGGACATCTTTTAACCAGGAGAGAATTG 730881069 179852 NM_000363.4(TNNI3):c.407G>A (p.Arg136Gln) TNNI3 Jan 05, 2015 Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569;MedGen:CN517202 Hypertrophic cardiomyopathy;not provided germline 19 55154172 CAGATCTGACTCAGAAGATCTTTGACCTTCGAGGCAAGTTTAAGCGGCCCACCCTGCGGAG -1 455649 NM_138694.3(PKHD1):c.2811G>A (p.Trp937Ter) PKHD1 May 08, 2017 MedGen:C0085548,OMIM:263200,Orphanet:ORPHA731,SNOMED CT:28770003 Autosomal recessive polycystic kidney disease germline 6 52043635 AGGGTCAACTCCCTGTGTCCATTCTGTGTGGTACTCCATTGGTATGATTTGTCACTTGGCT 137853280 358232 NM_000053.3(ATP7B):c.1708-1G>A ATP7B Dec 16, 2015 MedGen:C0019202,OMIM:277900,Orphanet:ORPHA905,SNOMED CT:88518009 Wilson disease unknown 13 51965034 TCTGTGGGATTCTTGCCATCCTGTGTTGCAGATCACAGGGATGACCTGCGCGTCCTGTGTC 772195825 443479 NM_000094.3(COL7A1):c.5173G>A (p.Gly1725Arg) COL7A1 Jul 18, 2017 MedGen:CN517202 not provided germline 3 48579650 TCTCTGCCACAGGGAGAGCCTGGGGACCGCGGACAAGAGGGTCCTCGAGGGCCCAAGGGTG 587779611 107077 NM_000090.3(COL3A1):c.1898G>A (p.Gly633Glu) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188997728 AGGGGCCTGGTGGTGACAAAGGAGACACAGGACCCCCTGGTCCACAAGGATTACAAGTAAG 72653136 32330 NM_000088.3(COL1A1):c.2533G>A (p.Gly845Arg) COL1A1 Oct 03, 1997 MedGen:C0268360,OMIM:166210,SNOMED CT:86470003 Osteogenesis imperfecta, recessive perinatal lethal germline 17 50190027 AAAGGCGATGCTGGTCCCCCTGGCCCTGCCGGACCCGCTGGACCCCCTGGCCCCATTGTGA 886043330 270416 NM_001848.2(COL6A1):c.1003-1G>A COL6A1 Feb 08, 2016 MedGen:CN029274,OMIM:158810;MedGen:CN033863,OMIM:254090 Bethlem myopathy 1;Ullrich congenital muscular dystrophy 1 germline 21 45990772 TCAGATTTTCTAGTTTTCTTCCTCTTTCCAGGGGGAGATGGGGTACCCAGGCCTGCCAGGC 267607013 15539 NM_173560.3(RFX6):c.542G>A (p.Arg181Gln) RFX6 Feb 11, 2010 MedGen:C2748662,OMIM:615710,Orphanet:ORPHA293864 Mitchell-Riley syndrome germline 6 116882404 GCCAGAAGTTTCCCCTCCTAACAACAAGGCGGCTTGGAACAAGAGGCCATTCAAAGTAAGA 80051519 32860 NM_031226.2(CYP19A1):c.1094G>A (p.Arg365Gln) CYP19A1 Jul 10, 1997 MedGen:C0878680,OMIM:613546,Orphanet:ORPHA91 Aromatase deficiency germline 15 51212489 TGATGGAAAACTTCATTTATGAGAGCATGCGGTACCAGCCTGTCGTGGACTTGGTCATGCG 72645357 32351 NM_000088.3(COL1A1):c.994G>A (p.Gly332Arg) COL1A1 Aug 14, 2015 MeSH:D010013,MedGen:C0029434,Orphanet:ORPHA666,SNOMED CT:78314001;MedGen:C0268362,OMIM:259420,Orphanet:ORPHA216812,SNOMED CT:385483009;MedGen:C0268363,OMIM:166220,Orphanet:ORPHA216820,SNOMED CT:205497004;MedGen:CN517202 Osteogenesis imperfecta;Osteogenesis imperfecta type III;Osteogenesis imperfecta with normal sclerae, dominant form;not provided germline;unknown 17 50196163 CGTGGAAATGATGGTGCTACTGGTGCTGCCGGGCCCCCTGTGAGTGTGGCCTGTAGGCCTC 886042173 265723 NM_001278074.1(COL5A1):c.2034+1G>A COL5A1 Jun 23, 2015 MedGen:C0268335,OMIM:130000,Orphanet:ORPHA287,SNOMED CT:20766005,SNOMED CT:83470009 Ehlers-Danlos syndrome, classic type germline 9 134763738 GTTGGGCCCAGGGGGCTGCCTGGGGAGCCCGTAAGTCTGTGAGCTGAGTGGGACGGTGGGG 1057519436 362138 NM_138615.2(DHX30):c.1478G>A (p.Arg493His) DHX30 Dec 18, 2017 Human Phenotype Ontology:HP:0000252,MedGen:C0424688;MedGen:CN703736,OMIM:617804;Human Phenotype Ontology:HP:0000657,MedGen:C3489733;Human Phenotype Ontology:HP:0001250,MedGen:C0036572;Human Phenotype Ontology:HP:0004322,MedGen:C0349588;Human Phenotype Ontology:HP:0000486,MedGen:C0038379;Human Phenotype Ontology:HP:0002317,MedGen:C0231686 Microcephaly;NEURODEVELOPMENTAL DISORDER WITH SEVERE MOTOR IMPAIRMENT AND ABSENT LANGUAGE;Oculomotor apraxia;Seizures;Short stature;Strabismus;Unsteady gait de novo;germline 3 47846550 GCTGCAATGTTATCATCACCCAACCTCGCCGCATCTCTGCTGTGTCTGTGGCACAGCGGGT 34948328 30392 NM_000518.4(HBB):c.22G>A (p.Glu8Lys) HBB Nov 21, 1981 MedGen:CN169374 not specified germline 11 5227000 ACAGACACCATGGTGCATCTGACTCCTGAGGAGAAGTCTGCCGTTACTGCCCTGTGGGGCA 373520843 389250 NM_016239.3(MYO15A):c.9572G>A (p.Arg3191His) MYO15A Jun 04, 2016 MedGen:C1838263,OMIM:600316 Deafness, autosomal recessive 3 germline 17 18162639 ACCTGCAGAAAACCTTGCGCTTCGGAGGTCGTCTGGAGCTCCCCAGCAGCATAGAGCTTCG -1 432047 NM_003002.3(SDHD):c.314+1G>A SDHD - MedGen:C1708353,Orphanet:ORPHA29072 Hereditary Paraganglioma-Pheochromocytoma Syndromes germline 11 112089012 GGCTGCAGCCCTCACTCTTCATGGTCACTGGCAAGTATAGCAATTCCAAATATAGTTGTCT 28940589 17133 NM_000920.3(PC):c.1828G>A (p.Ala610Thr) PC Jul 21, 2011 MedGen:C0034341,OMIM:266150,SNOMED CT:87694001 Pyruvate carboxylase deficiency germline 11 66851944 TGATCTGGGCCTCTCGGTTCCTGTGCAGGAGCCACGTTTGACGTCGCCATGCGCTTCCTGT 397515474 76960 NM_002336.2(LRP6):c.1418G>A (p.Arg473Gln) LRP6 Sep 01, 2013 MedGen:C1970440,OMIM:610947 Coronary artery disease, autosomal dominant 2 germline 12 12179937 CTGACTGGGGAGAAATTCCGAAAATTGAGCGAGCAGCTCTGGATGGTTCTGACCGTGTAGT 121913146 29733 NM_000208.3(INSR):c.479G>A (p.Trp160Ter) INSR Jul 01, 1990 MedGen:C0271690,OMIM:610549,SNOMED CT:9859006 Insulin-resistant diabetes mellitus AND acanthosis nigricans germline 19 7267518 ATGAGCTCTGTTACTTGGCCACTATCGACTGGTCCCGTATCCTGGATTCCGTGGAGGATAA 121909304 23201 NM_020297.3(ABCC9):c.4537G>A (p.Ala1513Thr) ABCC9 Apr 01, 2004 MedGen:C1837839,OMIM:608569 Dilated cardiomyopathy 1O germline 12 21801157 TCACAGCATCGAGTACACACTATTCTGACGGCAGACCTGGTTATTGTGATGAAGCGAGGAA 199473283 78826 NM_198056.2(SCN5A):c.4877G>A (p.Arg1626His) SCN5A Jan 16, 2017 MedGen:CN230736;MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MedGen:CN517202 Cardiovascular phenotype;Congenital long QT syndrome;not provided germline 3 38551495 TCTTCTCCCCGACGCTCTTCCGAGTCATCCGCCTGGCCCGAATAGGCCGCATCCTCAGACT 121907980 18977 NM_000520.5(HEXA):c.805+1G>A HEXA Jan 05, 2016 na;MedGen:C0039373,OMIM:272800,Orphanet:ORPHA845,SNOMED CT:111385000 Gm2-gangliosidosis, late onset;Tay-Sachs disease germline;unknown 15 72350517 CTCCTGGCCACACTTTGTCCTGGGGACCAGGTAAGAATGATGTCTGGGACCAGAGGGACTC 796052645 203759 NM_172107.3(KCNQ2):c.1058G>A (p.Arg353His) KCNQ2 Aug 25, 2016 MedGen:C3150986,OMIM:613720,Orphanet:ORPHA439218;MedGen:CN517202 Early infantile epileptic encephalopathy 7;not provided germline 20 63433869 CCTGGAGATTCTACGCCACCAACCTCTCGCGCACAGACCTGCACTCCACGTGGCAGTACTA 137852629 24349 NM_000423.2(KRT2):c.1459G>A (p.Glu487Lys) KRT2 Apr 01, 1999 MedGen:C0432306,OMIM:146800,Orphanet:ORPHA455,SNOMED CT:254169002;MedGen:C1838440,Orphanet:ORPHA289586;MedGen:CN517202 Ichthyosis bullosa of Siemens;Ichthyosis exfoliativa;not provided germline 12 52646750 ATCGCCACCTACCGCAAACTGCTGGAGGGCGAGGAGTGCAGGTGAGGGCACTGGGAAGGGA 9332967 451158 NM_000348.3(SRD5A2):c.737G>A (p.Arg246Gln) SRD5A2 Sep 02, 2016 MedGen:C0268297,OMIM:264600,Orphanet:ORPHA753,SNOMED CT:57514000 3-Oxo-5 alpha-steroid delta 4-dehydrogenase deficiency germline 2 31526224 TCAAGATGTTTGAGGACTACCCCAAATCTCGGAAAGCCCTTATTCCATTCATCTTTTAAAG 1060500001 398791 NM_030962.3(SBF2):c.2536+1G>A SBF2 Oct 24, 2016 MedGen:CN043578 Charcot-Marie-Tooth disease, type IV germline 11 9853539 ACATCAAGAGCCTTCATTGCATGATACCAGGTAATCACTCTGCAGATATTAGAGAATCAGA 200322968 172323 NM_015910.6(WDPCP):c.160G>A (p.Asp54Asn) WDPCP Feb 01, 2015 MedGen:C1857587,OMIM:217085 Orstavik Lindemann Solberg syndrome germline 2 63492856 TGGTCTTTGAAGAATACCTTACACATTGCGGGTAAATGAGCTCTGGATTAATTTCAATATT 61750061 22925 NM_000350.2(ABCA4):c.3106G>A (p.Glu1036Lys) ABCA4 Jan 01, 1998 MeSH:C535804,MedGen:C1855465,OMIM:248200;MedGen:CN517202 Stargardt disease 1;not provided germline 1 94043420 TTCTATGCCCAGCTGAAAGGAAAGTCCCAGGAGGAGGCCCAGCTGGAGATGGAAGCCATGT 28933385 28437 NM_000311.4(PRNP):c.598G>A (p.Glu200Lys) PRNP Oct 02, 2014 MedGen:C0206042,OMIM:600072,Orphanet:ORPHA466,SNOMED CT:83157008;MedGen:C0162534,Orphanet:ORPHA56970;MedGen:C0022336,OMIM:123400,Orphanet:ORPHA204,SNOMED CT:792004 Fatal familial insomnia;Genetic prion diseases;Jakob-Creutzfeldt disease germline 20 4699818 ACCACAACCACCAAGGGGGAGAACTTCACCGAGACCGACGTTAAGATGATGGAGCGCGTGG 121909341 23489 NM_012188.4(FOXI1):c.800G>A (p.Arg267Gln) FOXI1 Jun 01, 2007 Human Phenotype Ontology:HP:0011387,MedGen:C1863752,OMIM:600791;MedGen:C0271829,OMIM:274600,Orphanet:ORPHA705,SNOMED CT:70348004 Enlarged vestibular aqueduct;Pendred's syndrome germline 5 170108274 CAGGGGGCACCACCAGCTCCCCAGAGAAGCGGCCCTCCCCTCCCCCATCAGGCGCCCCTTG 387907175 40309 NM_000428.2(LTBP2):c.4313G>A (p.Cys1438Tyr) LTBP2 Jan 01, 2011 MedGen:C1562061,OMIM:251750,SNOMED CT:416671000 Microspherophakia germline 14 74505039 GCCGGAACACCACACAGGCTGAATGCTGCTGCACCCAGGGCGCTAGCTGGGGAGATGCCTG 80282562 57854 NM_000492.3(CFTR):c.532G>A (p.Gly178Arg) CFTR May 21, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008;MedGen:CN236562;MedGen:CN517202 Cystic fibrosis;ivacaftor response - Efficacy;not provided germline;unknown 7 117534318 TCAAGCCGTGTTCTAGATAAAATAAGTATTGGACAACTTGTTAGTCTCCTTTCCAACAACC 63750427 426883 NM_001171.5(ABCC6):c.3341G>A (p.Arg1114His) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16163158 TGTATGTGGTTAGCTCATGCCAGCTGAGACGCTTGGAGTCAGCCAGCTACTCGTCTGTCTG 1064792878 224794 NM_001953.4(TYMP):c.1300+1G>A TYMP Jan 14, 2016 MedGen:C0872218,OMIM:603041,Orphanet:ORPHA298 Mitochondrial DNA depletion syndrome 1 (MNGIE type) germline 22 50526000 TGGTCGACGTGGGTCAGAGGCTGCGCCGTGGTGAGCGCCGCCCCCGCCCTGCTGGCCCCGC -1 425494 NM_001135659.2(NRXN1):c.2205G>A (p.Trp735Ter) NRXN1 May 30, 2017 MedGen:CN517202 not provided germline 2 50538311 CAAAAACAATGGCATGTGCAGGGATGGGTGGAACAGATATGTCTGTGATTGTTCCGGAACA 121912841 166069 NM_000094.3(COL7A1):c.5443G>A (p.Gly1815Arg) COL7A1 Feb 01, 2002 MedGen:C0268371,OMIM:132000,SNOMED CT:2689001;MedGen:C1843761,OMIM:607523;MedGen:C0079474,OMIM:226600,SNOMED CT:48528004 Dominant dystrophic epidermolysis bullosa with absence of skin;Nail disorder, nonsyndromic congenital, 8;Recessive dystrophic epidermolysis bullosa germline;unknown 3 48578497 GACTTTTTCCAGGGGCTTCCAGGCCTCCGTGGAGAACAGGGCCTCCCTGGCCCCTCTGGTC 878853682 242084 NM_000138.4(FBN1):c.434G>A (p.Cys145Tyr) FBN1 Apr 16, 2017 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:CN118826,Orphanet:ORPHA91387 Marfan syndrome;Thoracic aortic aneurysm and aortic dissection germline 15 48600147 TATGCCAGAAAGGATACATAGGGACTCACTGTGGACAACGTAAGTACACTGTAGTTATAAG -1 427066 NM_001171.5(ABCC6):c.600+1G>A ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16214323 CCCTTCTTCCCTGAAGACCCCCAGCAGTCTGTAAGTCACCAAGTTCCAACCTCATTCCTGT 794727501 240397 NM_004820.4(CYP7B1):c.525G>A (p.Trp175Ter) CYP7B1 Feb 18, 2016 MedGen:C0037772 Spastic paraplegia germline 8 64616016 TGAACCCCAGCTGTTAAAAACCACAAGTTGGGACACGGCAGAACTGTATCCATTCTGCAGC 1057517373 358637 NM_000071.2(CBS):c.954+1G>A CBS Oct 19, 2016 MedGen:C3150344,OMIM:236200 Homocystinuria due to CBS deficiency unknown 21 43062952 GACTTCATCCCCACGGTGCTGGACAGGACGGTAGGTCGAGTCCAGAGCCCGGCCACAGTGC 121908483 20823 NM_014270.4(SLC7A9):c.775G>A (p.Gly259Arg) SLC7A9 Sep 01, 1999 Human Phenotype Ontology:HP:0003131,MedGen:C0010691,OMIM:220100,Orphanet:ORPHA214,SNOMED CT:85020001 Cystinuria germline 19 32859939 CCCAGAAACCTGCCTTTGGCCATTATCATCGGGATCCCCCTGGTGACGGCGTGCTACATCC 267606897 24741 m.13513G>A MT-ND5;MT-TL1 May 22, 2017 MedGen:C0162671,OMIM:540000,Orphanet:ORPHA550,SNOMED CT:39925003;MedGen:C0023264,OMIM:256000,Orphanet:ORPHA506,SNOMED CT:29570005;MedGen:C1838951;MedGen:C0751651,Orphanet:ORPHA68380;MedGen:CN517202 Juvenile myopathy, encephalopathy, lactic acidosis AND stroke;Leigh syndrome;Leigh syndrome due to mitochondrial complex I deficiency;Mitochondrial diseases;not provided germline MT 13513 ATACCTTTCCTCACAGGTTTCTACTCCAAAGACCACATCATCGAAACCGCAAACATATCAT 62644499 15656 NM_000277.2(PAH):c.1243G>A (p.Asp415Asn) PAH Jul 20, 2017 Human Phenotype Ontology:HP:0004923,MedGen:C0751435;MedGen:C0031485,OMIM:261600,Orphanet:ORPHA716,SNOMED CT:154735006;MedGen:CN517202 Hyperphenylalaninemia, non-pku;Phenylketonuria;not provided germline;unknown 12 102840472 ACAATACCTCGGCCCTTCTCAGTTCGCTACGACCCATACACCCAAAGGATTGAGGTCTTGG 80356651 24147 NM_000352.4(ABCC8):c.1144G>A (p.Glu382Lys) ABCC8 Jul 05, 2011 MedGen:C1833104,OMIM:606176,Orphanet:ORPHA99885 Permanent neonatal diabetes mellitus germline 11 17453151 TTTCTGCAAGCATCCTACTATGTGGCCATTGAAACTGGAATTAACTTGAGAGGAGCAATAC 28942078 18733 NM_000527.4(LDLR):c.1285G>A (p.Val429Met) LDLR Jun 03, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline;inherited 19 11113376 TACACCAGCCTCATCCCCAACCTGAGGAACGTGGTCGCTCTGGACACGGAGGTGGCCAGCA 104894638 20152 NM_000199.3(SGSH):c.449G>A (p.Arg150Gln) SGSH Jan 01, 1998 MedGen:C0086647,OMIM:252900,Orphanet:ORPHA79269,SNOMED CT:41572006 Mucopolysaccharidosis, MPS-III-A germline 17 80214672 AGGAGAATGGCTCCGTCCTCCAGGTGGGGCGGAACATCACTAGAATTAAGCTGCTCGTCCG 886039424 259761 NM_000249.3(MLH1):c.1997G>A (p.Trp666Ter) MLH1 May 13, 2015 MedGen:CN517202 not provided germline 3 37048911 GGTATTGAATTTCTTTGGACCAGGTGAATTGGGACGAAGAAAAGGAATGTTTTGAAAGCCT 863225218 214354 NM_015272.4(RPGRIP1L):c.1243+1G>A RPGRIP1L Feb 23, 2015 MedGen:C1969053,OMIM:611560 Joubert syndrome 7 unknown 16 53664869 AAATCCTTGACAGATTAAAAACTGAAAGAGGTACATTTGAAATAACCACTGCCTTACTCAT 786204718 186895 NM_000053.3(ATP7B):c.2668G>A (p.Val890Met) ATP7B Aug 23, 2017 MedGen:C0019202,OMIM:277900,Orphanet:ORPHA905,SNOMED CT:88518009;MedGen:CN517202 Wilson disease;not provided germline;unknown 13 51950069 CATGGCTCTGTGCTCATTAAAGCTACCCACGTGGGCAATGACACCACTTTGGCTCAGATTG -1 432174 NM_000444.5(PHEX):c.1754G>A (p.Gly585Glu) PHEX Oct 31, 2013 MedGen:C0733682,OMIM:307800,Orphanet:ORPHA89936,SNOMED CT:82236004 Familial X-linked hypophosphatemic vitamin D refractory rickets germline X 22219089 GAGTAATTGTCGGACATGAATTTACACATGGATTTGATAATAATGGTAAGTACCGGTTCAT 587779544 106994 NM_000090.3(COL3A1):c.1142G>A (p.Gly381Asp) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188993452 CTGGACCTCAGGGACACGCTGGTGCTCAAGGTCCTCCTGTAAGTATCATAGTTGAGAGGGA 121913315 186283 NM_000455.4(STK11):c.580G>A (p.Asp194Asn) STK11 Apr 28, 2017 Human Phenotype Ontology:HP:0030078,MeSH:C538231,MedGen:C0152013;MedGen:C0027672,SNOMED CT:699346009;MeSH:D009369,MedGen:C0027651,SNOMED CT:108369006;MeSH:D010580,MedGen:C0031269,OMIM:175200,Orphanet:ORPHA2869,SNOMED CT:54411001 Adenocarcinoma of lung;Hereditary cancer-predisposing syndrome;Neoplasm;Peutz-Jeghers syndrome germline;somatic 19 1220488 CTCACCACCGGTGGCACCCTCAAAATCTCCGACCTGGGCGTGGCCGAGGTAGGCACGTGCT 1060501114 393549 NM_198056.2(SCN5A):c.2636G>A (p.Trp879Ter) SCN5A Nov 30, 2016 MedGen:C1142166,Orphanet:ORPHA130,SNOMED CT:418818005 Brugada syndrome germline 3 38585842 GGGACAGCGACTCAGGCCTGCTGCCTCGCTGGCACATGATGGACTTCTTTCATGCCTTCCT 121913139 29726 NM_000208.3(INSR):c.3481G>A (p.Ala1161Thr) INSR Aug 01, 1990 Human Phenotype Ontology:HP:0000855,MedGen:C0021655;MedGen:C0271690,OMIM:610549,SNOMED CT:9859006 Insulin resistance;Insulin-resistant diabetes mellitus AND acanthosis nigricans germline 19 7122662 AACGCCAAGAAGTTTGTGCATCGGGACCTGGCAGCGAGAAACTGCATGGTCGCCCATGATT 104895461 19733 NM_022162.2(NOD2):c.1001G>A (p.Arg334Gln) NOD2 Aug 16, 2015 MedGen:C1861303,OMIM:186580,Orphanet:ORPHA90340;MedGen:C1836122,OMIM:609464;MedGen:CN517202 Blau syndrome;Sarcoidosis, early-onset;not provided germline 16 50710912 AATTTCTCTTTGTCTTCCCATTCAGCTGCCGGCAGCTGCAGTGCATGGCCAAACCACTCTC 121918593 28009 NM_000540.2(RYR1):c.7300G>A (p.Gly2434Arg) RYR1 Dec 29, 2016 MedGen:CN031421,OMIM:145600;MedGen:CN239331;MedGen:CN517202 Malignant hyperthermia, susceptibility to, 1;RYR1-Related Disorders;not provided germline;unknown 19 38499993 TCCTTCTATGCCGCCTTGATCGACCTGCTCGGACGCTGTGCACCAGAGATGCATGTGAGAC 63750232 419394 NM_000251.2(MSH2):c.2074G>A (p.Gly692Arg) MSH2 Mar 18, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 2 47476435 ACTGGGGTGATAGTACTCATGGCCCAAATTGGGTGTTTTGTGCCATGTGAGTCAGCAGAAG 121964950 27073 NM_000892.4(KLKB1):c.1205G>A (p.Trp402Ter) KLKB1 Dec 01, 2003 MedGen:C0272339,OMIM:612423,Orphanet:ORPHA749,SNOMED CT:48976006 Prekallikrein deficiency germline 4 186252077 TTGGAGGAACAAACTCTTCTTGGGGAGAGTGGCCCTGGCAGGTGAGCCTGCAGGTGAAGCT 121918621 27943 NM_003041.3(SLC5A2):c.1320G>A (p.Trp440Ter) SLC5A2 Dec 01, 2002 Gene:2759,MedGen:C0017980,OMIM:233100,Orphanet:ORPHA69076,SNOMED CT:226309007 Familial renal glucosuria germline 16 31488919 GGTGTTCATCGTGGTAGTGTCGGTGGCCTGGCTTCCCGTGGTGCAGGCGGCACAGGGCGGG 121909607 31443 NM_000508.4(FGA):c.104G>A (p.Arg35His) FGA Dec 20, 2012 Human Phenotype Ontology:HP:0011901,MedGen:C1260903,SNOMED CT:111589005 Dysfibrinogenemia germline 4 154589513 GTGACTTTCTAGCTGAAGGAGGAGGCGTGCGTGGCCCAAGGGTTGTGGAAAGACATCAATC 774271963 263767 NM_005506.3(SCARB2):c.704+5G>A SCARB2 Mar 05, 2015 MedGen:C0751779,OMIM:254900,Orphanet:ORPHA163696 Epilepsy, progressive myoclonic 4, with or without renal failure germline 4 76176432 AAAATTGTGGAATGGAATGGGAAAACGTAAGTCAAATGATTTATCAGTGGAATTATTTTTT 121965029 26961 NM_000203.4(IDUA):c.266G>A (p.Arg89Gln) IDUA Feb 11, 2016 Human Phenotype Ontology:HP:0000943,MedGen:C0086795,OMIM:607014,Orphanet:ORPHA93473;MedGen:C0023786,Orphanet:ORPHA579;MedGen:C0086431,OMIM:607015,Orphanet:ORPHA93476,SNOMED CT:26745009 Hurler syndrome;Mucopolysaccharidosis type I;Mucopolysaccharidosis, MPS-I-H/S germline 4 987916 CCGTCCCTCACCGCGGCATCAAGCAGGTCCGGACCCACTGGCTGCTGGAGCTTGTCACCAC 80356601 34704 NM_194248.2(OTOF):c.4559G>A (p.Arg1520Gln) OTOF Apr 26, 2011 MedGen:C1832828,OMIM:601071 Deafness, autosomal recessive 9 not provided 2 26466018 ACGGCAAAGCTGACCCCTACATCGCCATCCGGCTAGGCAAGACTGACATCCGCGACAAGGA 1805076 21660 NM_181699.2(PPP2R1B):c.269G>A (p.Gly90Asp) PPP2R1B Apr 01, 2002 MedGen:C0684249,OMIM:211980,SNOMED CT:187875007 Lung cancer unknown 11 111764842 CTCTTGCTGAGCAGCTGGGAAATTTCACTGGCCTAGTGGGAGGTCCTGACTTTGCCCACTG 121908537 21016 NM_003850.2(SUCLA2):c.352G>A (p.Gly118Arg) SUCLA2 Mar 01, 2007 MedGen:C2749864,OMIM:612073,Orphanet:ORPHA1933 Mitochondrial DNA depletion syndrome 5 (encephalomyopathic with or without methylmalonic aciduria) germline 13 47988901 AAAGGAACATTTGAAAGTGGCCTCAAAGGAGGAGTGAAGATAGTTTTCTCGTAAGTCACAT 587779635 107113 NM_000090.3(COL3A1):c.782G>A (p.Gly261Asp) COL3A1 Jun 09, 2017 MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000;MedGen:CN517202 Ehlers-Danlos syndrome, type 4;not provided germline 2 188990344 AAGGTCCAGCTGGGATACCTGGATTCCCTGGTATGAAAGGACACAGAGTAAGTAGAGTTTC 368217569 247428 NM_018191.3(RCBTB1):c.919G>A (p.Val307Met) RCBTB1 Nov 01, 2016 MedGen:C4310680,OMIM:617175;Human Phenotype Ontology:HP:0000547,MeSH:D012174,MedGen:C0035334,OMIM:268000,Orphanet:ORPHA791,SNOMED CT:28835009 Retinal dystrophy with or without extraocular anomalies;Retinitis pigmentosa germline 13 49549584 ACGTCTGCAGCCAAGACGCAGGGTGGGCACGTGTACATGTGGGGCCAGTGCCGGGGTCAGT 587779620 107088 NM_000090.3(COL3A1):c.1961G>A (p.Gly654Glu) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188998303 CTGGTACAGGTGGTCCTCCAGGAGAAAATGGAAAACCTGGGGAACCAGTAAGTTACGTTTC 1064797088 413170 NM_004004.5(GJB2):c.136G>A (p.Asp46Asn) GJB2 Dec 22, 2016 MedGen:C2675750,OMIM:601544 Deafness, autosomal dominant 3a germline 13 20189446 CTCGTTGTGGCTGCAAAGGAGGTGTGGGGAGATGAGCAGGCCGACTTTGTCTGCAACACCC 33971440 30475 NM_000518.4(HBB):c.92+1G>A HBB Jul 19, 2017 MedGen:C0005283,OMIM:613985,Orphanet:ORPHA848,SNOMED CT:65959000;MedGen:C0271980,SNOMED CT:86715000;MedGen:CN517202;MedGen:CN169374 beta Thalassemia;beta^0^ Thalassemia;not provided;not specified germline;unknown 11 5226929 GGATGAAGTTGGTGGTGAGGCCCTGGGCAGGTTGGTATCAAGGTTACAAGACAGGTTTAAG 780336679 420287 NM_002334.3(LRP4):c.316+1G>A LRP4 Mar 21, 2017 MedGen:C1859309,OMIM:212780,Orphanet:ORPHA3258 Syndactyly Cenani Lenz type biparental 11 46900261 GTGAGGATGACTCGGATGAGCAGGACTGTCGTGAGTGTTGGCAGAGGCTGGGCGGAACTCC 1057516046 353891 NM_001615.3(ACTG2):c.613G>A (p.Ala205Thr) ACTG2 Aug 21, 2015 MedGen:C1835084,OMIM:155310,Orphanet:ORPHA2241 Visceral myopathy de novo 2 73913646 ACAGAGAGAGGCTATTCCTTTGTGACCACAGGTATCCAGCCCCTTTTCTGATTCTGACTGG 886041853 265064 NM_000444.5(PHEX):c.941G>A (p.Trp314Ter) PHEX May 04, 2017 MedGen:CN517202 not provided germline X 22099013 TGTTTTGTTCTCTCTCCCCTCAGTTCGACTGGCTGGGCTACATCAAGAAGGTCATTGACAC 1057516081 354027 NM_172107.3(KCNQ2):c.476G>A (p.Gly159Glu) KCNQ2 Mar 31, 2016 MedGen:C1852587,OMIM:121200 Benign familial neonatal seizures 1 germline 20 63445276 GCTGCTGCTGCCGGTACCGTGGCTGGAGGGGGCGGCTCAAGTTTGCCCGGAAACCGTTCTG 863223318 39810 NM_014915.2(ANKRD26):c.-134G>A ANKRD26 Jan 07, 2011 MedGen:C1861185,OMIM:188000 Thrombocytopenia 2 germline 10 27100460 CTAGCGGGATCGCTTGCTTGGTAACCCGGAGGGAGAGATTGGAAACCGCGGAGTTTCCTTT 781161543 358920 NM_002878.3(RAD51D):c.576+1G>A RAD51D Jun 26, 2017 MedGen:C3280345,OMIM:614291 Breast-ovarian cancer, familial 4 germline;unknown 17 35106385 CAGGAGCTCCGAGGCACTGTGGCCCAGCAGGTGAGCCTGCTGTTCTGCCCCTCCTTGCTTA -1 427116 NM_001201401.1(GALC):c.194G>A (p.Gly65Glu) GALC Jul 28, 2017 MedGen:C0023521,OMIM:245200,Orphanet:ORPHA487,SNOMED CT:192782005 Galactosylceramide beta-galactosidase deficiency germline 14 87992971 TCGACGGCATCGGCGCGGTCAGCGGCGGCGGGGTGAGCGGCAAGCTGCGGGGATACGCGGG 875989907 228147 NM_000527.4(LDLR):c.796G>A (p.Asp266Asn) LDLR Mar 30, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline;inherited 19 11106666 GACCGGGAATATGACTGCAAGGACATGAGCGATGAAGTTGGCTGCGTTAATGGTGAGCGCT 886039409 260288 NM_000425.4(L1CAM):c.2092G>A (p.Gly698Arg) L1CAM May 05, 2017 MedGen:CN517202 not provided germline X 153867401 AGGGTTACTGCCATAAACAAATATGGCCCCGGGGAGCCCAGCCCGGTCTCTGAGACTGTGG 587777251 130975 NM_033419.4(PGAP3):c.275G>A (p.Gly92Asp) PGAP3 Feb 06, 2014 MedGen:C3810354,OMIM:615716 Hyperphosphatasia with mental retardation syndrome 4 germline 17 39685926 AGGAAGGTCACAAAGTGCCTCAGTTCCATGGCAAGGTGAGTTGGAGGGTCAGGGTAGGCAT 121918251 16919 NM_000255.3(MUT):c.278G>A (p.Arg93His) MUT Jan 07, 2016 MedGen:C1855115;MedGen:C1855114,OMIM:251000 METHYLMALONIC ACIDURIA, mut(0) TYPE;Methylmalonic aciduria due to methylmalonyl-CoA mutase deficiency germline 6 49459189 AAGAACTTCCAGGAGTGAAGCCATTCACACGTGGACCATATCCTACCATGTATACCTTTAG 794727365 192858 NM_025074.6(FRAS1):c.2722+1G>A FRAS1 Dec 19, 2014 MedGen:C0265233,OMIM:219000,SNOMED CT:204102004;MedGen:CN517202 Cryptophthalmos syndrome;not provided germline 4 78364055 ACTATCTTGATGACAATCATGTTTGCCAGCGTAGGTTTTTCCAATGAACCTTCTCTCCTTT 199473631 78866 NM_198056.2(SCN5A):c.5287G>A (p.Val1763Met) SCN5A Jul 05, 2017 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MedGen:CN517202 Congenital long QT syndrome;not provided germline 3 38551085 ACCACCTACATCATCATCTCCTTCCTCATCGTGGTCAACATGTACATTGCCATCATCCTGG 886039405 260291 NM_000425.4(L1CAM):c.807-6G>A L1CAM Dec 28, 2016 MedGen:C0037772;MedGen:CN517202 Spastic paraplegia;not provided germline X 153870246 CTCCCTTCTGCTCTCTTCCCTTTGCCTCCCGGGCAGTCCCACGCCCACCATCAAATGGCTG 770050262 200678 NM_138413.3(HOGA1):c.834G>A (p.Ala278=) HOGA1 Nov 27, 2014 MedGen:C3150878,OMIM:613616,Orphanet:ORPHA93600 Primary hyperoxaluria, type III germline 10 97601990 GCAGCACCGCCTCATTGAGCCAAACGCTGCGGTGAGCCAGTGGCAGCGGGGGCGCGGCCTG 587779505 106948 NM_000090.3(COL3A1):c.2708G>A (p.Gly903Glu) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189004028 CAGGTCCCAGCGGTTCTCCAGGCAAGGATGGGCCCCCAGGTCCTGCGGGTAACACTGGTGC 397509284 70248 NM_007294.3(BRCA1):c.5445G>A (p.Trp1815Ter) BRCA1 Sep 08, 2016 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome germline 17 43047665 CCCAATTGTGGTTGTGCAGCCAGATGCCTGGACAGAGGACAATGGCTTCCATGGTAAGGTG 863223408 210238 NM_000020.2(ACVRL1):c.1451G>A (p.Arg484Gln) ACVRL1 Dec 04, 2016 Human Phenotype Ontology:HP:0000421,MedGen:C0014591;MedGen:C1838163,OMIM:600376;Human Phenotype Ontology:HP:0002092,MedGen:C3203102;MedGen:C1832529;MedGen:CN517202;MedGen:CN169374 Epistaxis;Hereditary hemorrhagic telangiectasia type 2;Pulmonary arterial hypertension;Pulmonary arterial hypertension related to hereditary hemorrhagic telangiectasia;not provided;not specified germline;paternal;unknown 12 51920832 CAAACCCCTCTGCCCGACTCACCGCGCTGCGGATCAAGAAGACACTACAAAAAATTAGCAA 121908247 79323 NM_001127221.1(CACNA1A):c.4991G>A (p.Arg1664Gln) CACNA1A Jun 16, 2017 MedGen:CN225416;Human Phenotype Ontology:HP:0002280,MedGen:C1853377;Human Phenotype Ontology:HP:0001263,MedGen:C4020875;MedGen:C0752124,OMIM:183086,Orphanet:ORPHA98758;MedGen:CN517202 Chronic and progressive ataxia;Enlarged cisterna magna;Global developmental delay;Spinocerebellar ataxia 6;not provided germline;uniparental;unknown 19 13235693 TCATCAACCTGAGCTTTCTCCGCCTCTTCCGAGCTGCCCGGCTCATCAAACTTCTCCGTCA 606231364 31547 NM_000043.5(FAS):c.73G>A (p.Ala25Thr) FAS Apr 01, 1999 MedGen:C1866119 Autoimmune lymphoproliferative syndrome, type 1a germline 10 89003071 GTTGCTAGATTATCGTCCAAAAGTGTTAATGCCCAAGTGACTGACATCAACTCCAAGGGAT 118204062 16569 NM_000237.2(LPL):c.809G>A (p.Arg270His) LPL Jun 29, 2017 MedGen:C0023817,OMIM:238600,Orphanet:ORPHA309015,SNOMED CT:238086005,SNOMED CT:275598004;MedGen:CN517202 Hyperlipoproteinemia, type I;not provided germline 8 19955874 TGGACCAGCTAGTGAAGTGCTCCCACGAGCGCTCCATTCATCTCTTCATCGACTCTCTGTT 1057517884 360424 NM_145068.3(TRPV3):c.1703G>A (p.Gly568Asp) TRPV3 Nov 02, 2016 MedGen:CN517202 not provided germline 17 3524238 GCTGGGCGAACATGCTCTACTATACGCGGGGTTTCCAGTCCATGGGCATGTACAGCGTCAT 730880450 179872 NM_000169.2(GLA):c.713G>A (p.Ser238Asn) GLA Sep 14, 2015 MedGen:CN517202 not provided germline X 101398873 ATTTTGCTGACATTGATGATTCCTGGAAAAGTATAAAGAGTATCTTGGACTGGACATCTTT 796065047 204354 NM_012096.2(APPL1):c.280G>A (p.Asp94Asn) APPL1 Jul 02, 2015 MedGen:C4225299,OMIM:616511 Maturity-onset diabetes of the young, type 14 germline 3 57238111 TCTACATTGCAACAGTTTTCAAAAGTTATAGATGAGGTAAACGTTTATTTTATTTTGCTTG 1114167390 413999 NM_000088.3(COL1A1):c.2235+1G>A COL1A1 - MedGen:C0268362,OMIM:259420,Orphanet:ORPHA216812,SNOMED CT:385483009 Osteogenesis imperfecta type III unknown 17 50191382 GCTGGTCTTCCAGGGCCTAAGGGTGACAGAGTAAGTTCAACCTTCCCCCTCCCCTGAGCCC 137853050 22116 NM_006009.3(TUBA1A):c.1265G>A (p.Arg422His) TUBA1A Jun 09, 2016 MedGen:C1969029,OMIM:611603,Orphanet:ORPHA102011;MedGen:CN517202 Lissencephaly 3;not provided germline 12 49185101 GGATGGAGGAAGGTGAGTTTTCAGAGGCCCGTGAGGACATGGCTGCCCTTGAGAAGGATTA 886044722 237705 NM_000350.2(ABCA4):c.206G>A (p.Trp69Ter) ABCA4 Jan 01, 2016 MeSH:C535804,MedGen:C1855465,OMIM:248200 Stargardt disease 1 germline 1 94111534 AGGCGATGCCCTCAGCAGGAATGCTGCCGTGGCTCCAGGGGATCTTCTGCAATGTGAACAA 863225241 214392 NM_002004.3(FDPS):c.536G>A (p.Arg179Gln) FDPS Jul 23, 2015 MedGen:C4225262,OMIM:616631 Porokeratosis 9, multiple types germline 1 155317996 ATGACATCATGGATTCATCCCTTACCCGCCGGGGACAGATCTGCTGGTATCAGAAGGTAAT 137852499 25113 NM_000194.2(HPRT1):c.46G>A (p.Gly16Ser) HPRT1 May 12, 2011 na;MedGen:C0268117,OMIM:300323,Orphanet:ORPHA79233,SNOMED CT:238007004 HPRT URANGAN;Partial hypoxanthine-guanine phosphoribosyltransferase deficiency germline X 134473377 TTTCTTTTTCAGATTAGTGATGATGAACCAGGTTATGACCTTGATTTATTTTGCATACCTA 587779698 107205 NM_000090.3(COL3A1):c.2177G>A (p.Gly726Glu) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188999525 CTGGTGCTGCTGGTACTCCTGGTCTGCAAGGAATGCCTGGAGAAAGAGGAGGTCTTGGAAG 1025339570 475420 NM_000051.3(ATM):c.1178G>A (p.Trp393Ter) ATM May 10, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 11 108249045 CTTGCAAAAGGAAGAAAATAGAACTAGGCTGGGAAGTAATAAAAGATCACCTTCAGAAGTC 1085307152 414078 NM_001204.6(BMPR2):c.39G>A (p.W13*) BMPR2 - MedGen:C0152171,OMIM:178600,SNOMED CT:26174007 Primary pulmonary hypertension germline 2 202377513 CTCGCTGCAGCGGCCCTGGCGGGTGCCCTGGCTACCATGGACCATCCTGCTGGTCAGCACT 863225178 214175 NM_001080522.2(CC2D2A):c.2671G>A (p.Glu891Lys) CC2D2A Feb 23, 2015 MedGen:C2676788,OMIM:612285 Joubert syndrome 9 unknown 4 15557349 GAATCCTATGTCCCTGATTTCTTTAGACTGGAGCAGCTGCAACAGGAGTTTAACTTTGTTT 1800171 18174 NM_000218.2(KCNQ1):c.1032G>A (p.Ala344=) KCNQ1 Sep 01, 2017 MeSH:D008133,MedGen:C0023976,SNOMED CT:9651007;MedGen:C0035828,OMIM:192500,Orphanet:ORPHA101016,SNOMED CT:20852007;MedGen:C3150943,OMIM:613688;MedGen:CN517202 Long QT syndrome;Long QT syndrome 1;Long QT syndrome 2;not provided germline 11 2583545 CTTTGCCATCTCCTTCTTTGCGCTCCCAGCGGTAGGTGCCCCGTGGGTGCGTTTTCCCTGG 199422252 47539 NM_001363.4(DKC1):c.1156G>A (p.Ala386Thr) DKC1 May 10, 2012 MedGen:C1148551,OMIM:305000 Dyskeratosis congenita X-linked not provided X 154774602 TCTAATGTTGACACCTTGATGTTCCACCAGGCAAGTCAGAAGAAGCTGATGATCAAGCAGG 397514979 75903 NM_000548.4(TSC2):c.3623G>A (p.Trp1208Ter) TSC2 Dec 29, 2016 MedGen:C1860707,OMIM:613254;MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000 Tuberous sclerosis 2;Tuberous sclerosis syndrome germline 16 2081607 GTGCTGCCGCCTCCGCAGGGAACACCAGCTGGCTGATGAGCCTGGAGAACCCGCTCAGCCC 138672528 166367 NM_144773.3(PROKR2):c.343G>A (p.Val115Met) PROKR2 Sep 01, 2008 MedGen:C2930927,OMIM:244200 Kallmann syndrome 3 germline 20 5314027 ATCTGCTGCCCCTTCGAGATGGACTACTACGTGGTACGGCAGCTCTCCTGGGAGCATGGCC -1 440855 NM_000297.3(PKD2):c.1898+5G>A PKD2 Jul 21, 2017 MedGen:CN517202 not provided germline 4 88056272 GACTTCAGTACTTTCCAAGAGTGTATGTAAGTATATATGAAATTAAGAAGAAAAATTTAAT 267607507 77385 NM_002055.4(GFAP):c.613G>A (p.Glu205Lys) GFAP Jan 08, 2015 MedGen:C0270726,OMIM:203450,Orphanet:ORPHA58,SNOMED CT:81854007;MedGen:CN517202 Alexander's disease;not provided germline 17 44913733 GAGGAGATCCGGTTCTTGAGGAAGATCCACGAGGAGGTGAGGCCAGGGCAGAGGGAGGAAA 777756488 360014 NM_014384.2(ACAD8):c.567+1G>A ACAD8 Jun 23, 2015 MedGen:CN517202 not provided germline 11 134259085 GGAGATCATTACATCCTCAATGGCTCCAAGGTACTAGCGTGCGTCCTCCCAGAGCACTTTG 748365248 269998 NM_138694.3(PKHD1):c.707+1G>A PKHD1 Feb 05, 2016 MedGen:C0085548,OMIM:263200,Orphanet:ORPHA731,SNOMED CT:28770003 Autosomal recessive polycystic kidney disease germline;unknown 6 52070405 TGTTAGCTTCTCAGTATTTAACAAAGGAAAGTAAGTAACTGGGTATAGAAATAGGCAAATT 121909721 31199 NM_002437.4(MPV17):c.149G>A (p.Arg50Gln) MPV17 May 17, 2012 MedGen:C1850406,OMIM:256810,Orphanet:ORPHA255229 Navajo neurohepatopathy germline 2 27313031 GGCGGGGTCTGCAGGAACACCAGAGAGGCCGGACTCTGACCATGGTGTCCCTGGGCTGTGG 863225075 214568 NM_001164144.2(CHAMP1):c.1544G>A (p.Trp515Ter) CHAMP1 Oct 16, 2015 MedGen:CN517202 not provided germline 13 114325386 CTGAGTCCCCCAAAGCAGCCTCAGATATCTGGAAGCCTGTTCTCTCTATCGATACTGAGCC 878854769 243071 NM_005359.5(SMAD4):c.906G>A (p.Trp302Ter) SMAD4 Apr 19, 2017 MedGen:C0345893,OMIM:174900,Orphanet:ORPHA329971,SNOMED CT:9273005 Juvenile polyposis syndrome germline 18 51059867 AAATGGAATTTTTGTTGTCTTTTCTTTAGGGCCTGTTCACAATGAGCTTGCATTCCAGCCT 121918681 27660 NM_001063.3(TF):c.229G>A (p.Asp77Asn) TF Oct 15, 2004 MedGen:C1859593,OMIM:209300 Atransferrinemia germline 3 133753607 TGGCCTGTTCTCTTTCAGGCAAACGAAGCGGATGCTGTGACACTGGATGCAGGTTTGGTGT 104894685 31525 NM_000146.3(FTL):c.286G>A (p.Ala96Thr) FTL Aug 23, 2005 MedGen:C1853578,OMIM:606159,Orphanet:ORPHA157846 Neuroferritinopathy germline 19 48966317 GCTGAAGATGAGTGGGGTAAAACCCCAGACGCCATGAAAGCTGCCATGGCCCTGGAGAAAA 879255672 247660 NM_144997.5(FLCN):c.1098G>A (p.Trp366Ter) FLCN Jul 18, 2016 MedGen:C0346010,OMIM:135150,Orphanet:ORPHA122,SNOMED CT:110985001 Multiple fibrofolliculomas germline 17 17217147 GGGTGCCCCTTCTTTCCGCATGCTGGCCTGGCACGTTCTCATGGGGAACCAGGTGATCTGG 112660651 197823 NM_000138.4(FBN1):c.266G>A (p.Cys89Tyr) FBN1 Jun 26, 2017 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:CN118826,Orphanet:ORPHA91387;MedGen:CN517202 Marfan syndrome;Thoracic aortic aneurysm and aortic dissection;not provided germline 15 48610808 GTTTATTCACAGCCATTTGCCGGCATTCCTGTGGGGATGGATTTTGTTCGAGGCCAAATAT 121908833 21227 NM_003680.3(YARS):c.121G>A (p.Gly41Arg) YARS Feb 01, 2006 MedGen:C1842237,OMIM:608323,Orphanet:ORPHA100045 Charcot-Marie-Tooth disease, dominant intermediate C germline 1 32810994 CTGAAGGAGCGGGAACTTAAAATTTACTGGGGAACGGCAACCACGGGCAAACCACATGTGG 28933401 27959 NM_000702.3(ATP1A2):c.2066G>A (p.Arg689Gln) ATP1A2 Jul 15, 2014 MedGen:C1865322,OMIM:602481 Familial hemiplegic migraine type 2 germline 1 160135246 TCAAGAACCACACAGAGATCGTCTTTGCTCGAACGTCTCCCCAGCAGAAGCTCATCATTGT -1 472236 NM_002875.4(RAD51):c.749G>A (p.Arg250Gln) RAD51 Dec 20, 2017 MedGen:C3281089,OMIM:614508 Mirror movements 2 germline 15 40729609 CCAGGCAGATGCACTTGGCCAGGTTTCTGCGGATGCTTCTGCGACTCGCTGATGAGGTAAG 104894174 22627 NM_006214.3(PHYH):c.824G>A (p.Arg275Gln) PHYH May 01, 2000 MedGen:C2749345 Refsum disease, adult, 1 germline 10 13283694 GATCTGGTCAGAATAAAACCCAGGGATTCCGGAAGGTAAGCATTCACATTGCTGCACCTGC 81002846 67105 NM_000059.3(BRCA2):c.793+1G>A BRCA2 Oct 09, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN169374 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not specified germline 13 32331031 ACACAAATCAAAGAGAAGCTGCAAGTCATGGTAAGTCCTCTGTTTAGTTGAACTACAGGTT 137852521 25030 NM_000425.4(L1CAM):c.551G>A (p.Arg184Gln) L1CAM Jul 01, 1994 MedGen:C0265216,OMIM:307000,Orphanet:ORPHA2182,SNOMED CT:71779008 X-linked hydrocephalus syndrome germline X 153870933 CAGAGATCTTGCACATCAAGCAGGACGAGCGGGTGACGATGGGCCAGAACGGCAACCTCTA 387907227 44204 NM_020297.3(ABCC9):c.3347G>A (p.Arg1116His) ABCC9 May 18, 2012 MedGen:C0795905,OMIM:239850,Orphanet:ORPHA1517 Hypertrichotic osteochondrodysplasia germline 12 21842440 ACATCCCTCCAACCTTGGAATCTCTAACTCGCTCAACACTGCTCTGCCTGTCTGCCATTGG 28933368 28917 NM_001005862.2(ERBB2):c.2650G>A (p.Glu884Lys) ERBB2 Mar 08, 2013 MedGen:C2750850,OMIM:137800 Glioma susceptibility 1 somatic 17 39725721 CCTGTCTCTGCCTTAGGTGTGACTGTGTGGGAGCTGATGACTTTTGGGGCCAAACCTTACG 563189672 432254 NM_023936.1(MRPS34):c.322-10G>A MRPS34 Sep 15, 2017 MedGen:CN469327,OMIM:617664 COMBINED OXIDATIVE PHOSPHORYLATION DEFICIENCY 32 germline 16 1772656 GAGCTTTGCGAGCTGACCCCGCTTCCTTCTGGCTTTGCAGAACTTGGACCACGGGAAGGCC -1 453057 NM_004656.3(BAP1):c.587G>A (p.Trp196Ter) BAP1 Mar 22, 2017 MedGen:C3280492,OMIM:614327,Orphanet:ORPHA289539 Tumor susceptibility linked to germline BAP1 mutations germline 3 52406901 ATTCCTTGTCTTGGTCTCCACTAGGGCCCTGGGGGGAGGACGAGGAGTGGACAGACAAGGC 1085307157 414084 NM_001204.6(BMPR2):c.76+5G>A BMPR2 - MedGen:C0152171,OMIM:178600,SNOMED CT:26174007 Primary pulmonary hypertension germline 2 202377555 CATCCTGCTGGTCAGCACTGCGGCTGGTGAGTAGCTCCGGCCGGCACGTCCCGGCCACTGC 886040347 261056 NM_000059.3(BRCA2):c.1184G>A (p.Trp395Ter) BRCA2 Oct 18, 2016 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome germline 13 32332662 AGGAAGTTGTACCGTCTTTGGCCTGTGAATGGTCTCAACTAACCCTTTCAGGTCTAAATGG 62645748 48213 NM_201253.2(CRB1):c.2843G>A (p.Cys948Tyr) CRB1 Mar 16, 2017 MedGen:C3151202,OMIM:613835;MedGen:C3151202,OMIM:613835;Human Phenotype Ontology:HP:0000556,MedGen:C0854723,Orphanet:ORPHA71862,SNOMED CT:314407005;MedGen:C1838647,OMIM:600105;MedGen:C1838647,OMIM:600105;MedGen:CN517202 Leber congenital amaurosis 8;Leber congenital amaurosis 8;Retinal dystrophy;Retinitis pigmentosa 12;Retinitis pigmentosa 12;not provided germline;unknown 1 197434706 TTATTGATTATTATCACCTTCTCTCATTAGGTATTGCAAATGCTGTTTTTAATGGACAAAG -1 434376 NM_013227.3(ACAN):c.7203G>A (p.Trp2401Ter) ACAN Sep 28, 2017 Human Phenotype Ontology:HP:0010886,MedGen:C0029421,OMIM:165800,Orphanet:ORPHA2764,SNOMED CT:82562007 Osteochondritis dissecans germline 15 88872895 CCACTCCCACCCACAGCAATTTGAGAACTGGCGCCCCAACCAGCCTGACAACTTTTTTGCC 5122 17621 NM_000483.4(APOC2):c.178G>A (p.Glu60Lys) APOC2 Jan 01, 1993 na APOLIPOPROTEIN C-II (SAN FRANCISCO) germline 19 44948823 TCAGCAAAGACAGCCGCCCAGAACCTGTACGAGAAGACATACCTGCCCGCTGTAGATGAGA 370421531 203537 NM_000156.5(GAMT):c.522G>A (p.Trp174Ter) GAMT Aug 14, 2017 MedGen:CN227588,Orphanet:ORPHA79172;MedGen:C0574080,OMIM:612736,Orphanet:ORPHA382,SNOMED CT:124239003;MedGen:CN517202 Cerebral creatine deficiency syndrome;Deficiency of guanidinoacetate methyltransferase;not provided germline 19 1398964 CGTCCTCACCTACTGCAACCTCACCTCCTGGGGGGAGCTGATGAAGTCCAAGTACTCAGAC 111033386 57716 NM_206933.2(USH2A):c.6224G>A (p.Trp2075Ter) USH2A Nov 30, 2011 MedGen:C1848634,OMIM:276901 Usher syndrome, type 2A germline 1 216046532 AATCCCTTCCCAGTTCTTTGCTGCTCTCCTGGAACCCACCCAAAAAGGCAAATGGTATTAT 753392652 373755 NM_000257.3(MYH7):c.5655G>A (p.Ala1885=) MYH7 Apr 21, 2017 Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569;MedGen:CN517202 Hypertrophic cardiomyopathy;not provided germline 14 23414007 CAAGGCCTACAAGCGCCAGGCCGAGGAGGCGGTGAGTGACCCTGCTGGGGACTAGGCCCAG 587779484 106924 NM_000090.3(COL3A1):c.2203G>A (p.Gly735Arg) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188999551 CAAGGAATGCCTGGAGAAAGAGGAGGTCTTGGAAGTCCTGGTCCAAAGGGTGACAAGGTGT 104894489 29384 NM_002435.2(MPI):c.656G>A (p.Arg219Gln) MPI Jul 14, 2016 MedGen:C0282577,Orphanet:ORPHA137,SNOMED CT:238049009;MedGen:C1865145,OMIM:602579,Orphanet:ORPHA79319 Congenital disorder of glycosylation;Congenital disorder of glycosylation type 1B germline;unknown 15 74893306 TGGTGGAACAGCTCAACCTGTTGGTGAAGCGGATCTCCCAGCAAGGTGGACACAGTTATAT 137854538 30985 NM_001077488.3(GNAS):c.695G>A (p.Arg232His) GNAS Jan 01, 2001 Human Phenotype Ontology:HP:0000852,MedGen:C0033806,OMIM:103580,Orphanet:ORPHA97593 Pseudohypoparathyroidism type 1A germline 20 58909553 TGTTTGACGTGGGTGGCCAGCGCGATGAACGCCGCAAGTGGATCCAGTGCTTCAACGGTAG 72653753 427070 NM_001171.5(ABCC6):c.386G>A (p.Gly129Glu) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16219642 TGTTCCTGATTCACACCGAGAGGAAAAAGGGAGTCCAGTCATCTGGAGTGCTGTTTGGTTA 796051852 16066 NM_020223.3(FAM20C):c.1136G>A (p.Gly379Glu) FAM20C Nov 01, 2007 MedGen:C1850106,OMIM:259775,Orphanet:ORPHA1832 Raine syndrome germline 7 255912 ACTACTGCTCCACGGAGCACGCCCTGTGCGGGAAGCCAGACCAGATCGAGGGCTCGCTGGC 104893844 31071 NM_000406.2(GNRHR):c.268G>A (p.Glu90Lys) GNRHR May 01, 2002 Human Phenotype Ontology:HP:0000044,MedGen:C0271623,OMIM:146110,Orphanet:ORPHA181387,SNOMED CT:33927004 Hypogonadotropic hypogonadism 7 with or without anosmia germline 4 67754068 TTAAAACATCTGACCTTAGCCAACCTGTTGGAGACTCTGATTGTCATGCCACTGGATGGGA -1 482242 NM_000425.4(L1CAM):c.1379G>A (p.Trp460Ter) L1CAM Dec 12, 2016 MedGen:CN517202 not provided germline X 153868841 CCTTCGGAGCGCCTGTGCCCAGTGTTCAGTGGTGAGTGTCTCGTCCTGGTAGTGGTGAGTG 879255226 434353 NM_000527.4(LDLR):c.2547+5G>A LDLR - MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11129675 ACCAGGACGGCTACAGCTACCCCTCGGTGAGTGACCCTCTCTAGAAAGCCAGAGCCCATGG 863225186 214338 NM_025114.3(CEP290):c.1623+1G>A CEP290 Feb 23, 2015 MedGen:C1857780,OMIM:610188 Joubert syndrome 5 unknown 12 88118642 AGAGCTGAAAACCAGATTCTTTTGAAAGAGGCAAGTGTGGTAGTCAGTTGATTATTTTCTT 119103232 16938 NM_000060.4(BTD):c.100G>A (p.Gly34Ser) BTD Dec 04, 2012 MedGen:C0220754,OMIM:253260,Orphanet:ORPHA79241,SNOMED CT:8808004 Biotinidase deficiency germline 3 15635479 GCCAGAAGTAAGCTTGCTCTTTTCCTCTGCGGCTGTTACGTGGTTGCCCTGGGAGCCCACA -1 488126 NM_001845.5(COL4A1):c.2842G>A (p.Gly948Ser) COL4A1 Feb 14, 2018 Human Phenotype Ontology:HP:0000609,MedGen:C0338502,Orphanet:ORPHA137902 Optic nerve hypoplasia de novo 13 110176912 ATGGATAAGGTGGACATGGGCAGCATGAAGGGCCAGAAAGGAGACCAAGGAGAGAAAGGCA 371418985 232124 NM_007194.3(CHEK2):c.1232G>A (p.Trp411Ter) CHEK2 Apr 18, 2017 MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Familial cancer of breast;Hereditary cancer-predisposing syndrome;not provided germline;unknown 22 28695737 CTGCTGGGTATAACCGTGCTGTGGACTGCTGGAGTTTAGGAGTTATTCTTTTTATCTGGTA 62638625 20880 NM_000843.3(GRM6):c.2341G>A (p.Glu781Lys) GRM6 Mar 29, 2005 MedGen:C1850362,OMIM:257270;MedGen:CN517202 Congenital stationary night blindness, type 1B;not provided germline 5 178983005 AAGGCCCGTGGCGTGCCCGAGACCTTCAACGAGGCCAAGCCCATCGGCTTCACCATGTACA 74315287 19424 NM_057176.2(BSND):c.28G>A (p.Gly10Ser) BSND Nov 01, 2001 MedGen:C1865270,OMIM:602522 Bartter syndrome type 4 germline 1 54999214 GCCATGGCTGACGAGAAGACCTTCCGGATCGGCTTCATTGTGCTGGGGCTTTTCCTGCTGG 587777721 165903 NM_014191.3(SCN8A):c.4850G>A (p.Arg1617Gln) SCN8A May 05, 2017 MedGen:C3281191,OMIM:614558;MedGen:CN517202 Early infantile epileptic encephalopathy 13;not provided de novo;germline 12 51806336 AGAAATACTTTGTTTCCCCAACCCTATTCCGAGTCATCCGATTGGCCCGTATTGGGCGCAT 267606969 18261 NM_013382.5(POMT2):c.2177G>A (p.Gly726Glu) POMT2 May 26, 2009 MedGen:C3150411,OMIM:613150;MedGen:C3150416,OMIM:613156 Congenital muscular dystrophy-dystroglycanopathy with brain and eye anomalies, type A2;Congenital muscular dystrophy-dystroglycanopathy with mental retardation, type B2 germline 14 77277452 GCTTCTACCTCTTCCACCCTCTGGCTTACGGGATGGTTGGTCCCCTGGCCCAGGACCCCCA 104894794 26530 NM_006579.2(EBP):c.587G>A (p.Trp196Ter) EBP Oct 02, 2000 MedGen:C0282102,OMIM:302960,Orphanet:ORPHA35173 Chondrodysplasia punctata 2 X-linked dominant germline X 48528351 GGTTTTACTTTGTCTTCATGAATGCCCTGTGGCTGGTGCTGCCTGGAGTCCTTGTGCTTGA 1057521074 380000 NM_000132.3(F8):c.6103G>A (p.Val2035Met) F8 Jan 11, 2017 MedGen:CN517202 not provided germline X 154902063 CTACATGCTGGGATGAGCACACTTTTTCTGGTGTACAGCAATAGTGAGTAGCAATGTGGGC 587779605 107173 NM_000090.3(COL3A1):c.764G>A (p.Gly255Glu) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188990326 ATTATTTTTAGGGTATCAAAGGTCCAGCTGGGATACCTGGATTCCCTGGTATGAAAGGACA 369083786 359186 NM_024854.4(PYROXD1):c.285+1G>A PYROXD1 Dec 19, 2016 MedGen:C4310645,OMIM:617258 Myopathy, myofibrillar, 8 germline 12 21445467 GGCGTAAAGCAACTGAAGAGTGAAGAACACGTAAGATAATTGTTTTCTTAATAACATTTTC 121918086 28486 NM_000371.3(TTR):c.241G>A (p.Glu81Lys) TTR Aug 16, 1993 MedGen:C2751492,OMIM:105210,SNOMED CT:43532007,SNOMED CT:442012008 Amyloidogenic transthyretin amyloidosis germline 18 31595160 GAGTCTGGAGAGCTGCATGGGCTCACAACTGAGGAGGAATTTGTAGAAGGGATATACAAAG 775997446 413200 NM_139284.2(LGI4):c.863G>A (p.Trp288Ter) LGI4 May 02, 2017 MedGen:CN243956,OMIM:617468 Arthrogryposis multiplex congenita, neurogenic, with myelin defect germline 19 35126706 CGAGCCTCTTCGTGCTGGCTGCCCGCCTGTGGGGGGGCTCACAGCTGTGGGCCCGGCCCAG 267607222 20726 NM_002334.3(LRP4):c.409G>A (p.Asp137Asn) LRP4 May 14, 2010 MedGen:C1859309,OMIM:212780,Orphanet:ORPHA3258 Syndactyly Cenani Lenz type germline 11 46899884 TGGCACTGCGATGGTGACAATGACTGTGGCGACAACAGCGATGAGCAGTGTGGTGGGTGAC 150232843 181186 NM_031433.3(MFRP):c.201G>A (p.Trp67Ter) MFRP Feb 27, 2015 MedGen:C1970236,OMIM:611040,Orphanet:ORPHA251279 Microphthalmia, isolated 5 germline 11 119346116 AGGGCTACGGCCAGACTGCCGCTTCTCCTGGCTCTGTGTCCTCCTGCTCTCCAGCCTGCTC 1064796660 408660 NM_001844.4(COL2A1):c.2491G>A (p.Gly831Arg) COL2A1 Feb 23, 2017 MedGen:CN517202 not provided germline 12 47980941 CAGGGTGAACGTGGAGAGACTGGGCCCCCCGGACCAGCGGGATTTGCTGGGCCTCCTGTGA 61755793 28206 NM_000322.4(PRPH2):c.515G>A (p.Arg172Gln) PRPH2 Apr 01, 2009 MedGen:C2751290,OMIM:613105;MedGen:CN517202 Choroidal dystrophy, central areolar 2;not provided germline 6 42721820 AGTTCAAATGCTGCGGCAACAACGGTTTTCGGGACTGGTTTGAGATTCAGTGGATCAGCAA 387907183 40323 NM_001004127.2(ALG11):c.1192G>A (p.Glu398Lys) ALG11 Mar 01, 2012 MedGen:C3150913,OMIM:613661,Orphanet:ORPHA280071 Congenital disorder of glycosylation type 1P germline 13 52024922 GCAACAATTGGTCTGCATACCATGTGGAACGAGCATTTTGGGATTGGTGAGTTTGGCCTTT 80359865 34088 NM_001017420.2(ESCO2):c.1354-18G>A ESCO2 Oct 02, 2008 MedGen:C0392475,OMIM:268300,OMIM:269000,SNOMED CT:48718006 Roberts-SC phocomelia syndrome not provided 8 27792650 ATTGTACTTTTTAAAACATTCACCTGTCTTGGTTTTTAAAATCATTAGGTAGAAGATGTCC 767000881 441049 NM_000083.2(CLCN1):c.1063G>A (p.Gly355Arg) CLCN1 Jul 31, 2017 MedGen:C0751360,OMIM:255700,SNOMED CT:20305008;MedGen:CN517202 Congenital myotonia, autosomal recessive form;not provided germline 7 143331315 CTGAAGGAACTACCAGCTTTTGCTGCCATCGGGTCAGTGGGGTTACCTGCTCTGTGTGTGG 587779561 107013 NM_000090.3(COL3A1):c.3319G>A (p.Gly1107Arg) COL3A1 Feb 24, 2016 MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189007563 ACAGGTGAACGTGGAGCTGCTGGCATCAAAGGACATCGAGGATTCCCTGGTAATCCAGGTG 398123050 76345 NM_016434.3(RTEL1):c.2141+5G>A RTEL1 Aug 15, 2013 MedGen:C3554656,OMIM:615190 Dyskeratosis congenita, autosomal recessive, 5 germline 20 63689870 GGAGCTGTCTTCCTCTGTGACCACAGGTGCGTGCAGTCCGGTGGCAGGCGCGGCGCCAGGG 138947766 362713 NM_000527.4(LDLR):c.1730G>A (p.Trp577Ter) LDLR Mar 30, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11116883 GTCTAGATCTCCTCAGTGGCCGCCTCTACTGGGTTGACTCCAAACTTCACTCCATCTCAAG 118203979 16400 NM_148960.2(CLDN19):c.59G>A (p.Gly20Asp) CLDN19 Nov 01, 2006 MedGen:C1855466,OMIM:248190,Orphanet:ORPHA2196 Hypomagnesemia 5, renal, with ocular involvement germline 1 42740005 GCTACTTCTTGGCCCTGGGTGGCTGGGTGGGCATCATTGCTAGCACAGCCCTGCCACAGTG 121913562 29368 NM_005912.2(MC4R):c.812G>A (p.Cys271Tyr) MC4R Dec 10, 2015 MedGen:C0028754,OMIM:601665,Orphanet:ORPHA71529,SNOMED CT:414916001 Obesity germline;maternal;unknown 18 60371538 TCTTCCTCCACTTAATATTCTACATCTCTTGTCCTCAGAATCCATATTGTGTGTGCTTCAT 1057519345 362113 NM_024876.3(COQ8B):c.101G>A (p.Trp34Ter) COQ8B Jun 07, 2016 MedGen:C3809965,OMIM:615573 Nephrotic syndrome, type 9 germline 19 40714532 GTGGGGCCCTGGGGCCTGGGCCCCACCGCTGGGTAAGAGGCTAGGGAGCAGGTCCCCAAGG -1 426441 NM_003159.2(CDKL5):c.65-1G>A CDKL5 May 31, 2017 MedGen:CN517202 not provided germline X 18510819 GCCCTTGATTGTTTACTTCTTTTTATTATAGGAGCCTATGGAGTTGTACTTAAATGCAGAC 397514424 36427 NM_000060.4(BTD):c.1463G>A (p.Gly488Asp) BTD Dec 04, 2012 MedGen:C0220754,OMIM:253260,Orphanet:ORPHA79241,SNOMED CT:8808004 Biotinidase deficiency not provided 3 15645319 CCACGGGGATATTTGAGTTTCACCTGTGGGGCAACTTCAGTACTTCCTATATCTTTCCTTT 376974221 271173 NM_000272.3(NPHP1):c.329+1G>A NPHP1 Mar 16, 2016 MedGen:CN517202 not provided germline 2 110178422 TGTGACAATAAGCAGAGAAAATATAACTGAGTATGCTTCCTTTCTACCTTTCTTTTTTCTT 372487178 227735 NM_012200.3(B3GAT3):c.667G>A (p.Gly223Ser) B3GAT3 May 13, 2016 na MULTIPLE JOINT DISLOCATIONS, SHORT STATURE, AND CRANIOFACIAL DYSMORPHISM WITH CONGENITAL HEART DEFECTS germline 11 62616748 GTCTCAGTGTGGCCTGTGGGGCTGGTGGGCGGCCTGCGATTCGAGGGCCCTCAGGTACAGG 121912679 33349 NM_001105.4(ACVR1):c.1067G>A (p.Gly356Asp) ACVR1 Mar 01, 2009 MedGen:C0016037,OMIM:135100,Orphanet:ORPHA337,SNOMED CT:82725007 Progressive myositis ossificans germline 2 157761077 TTGATTACATTGTTATCTTCTTCCTTTCAGGCCTGGCAGTCATGCATTCCCAGAGCACCAA 137852461 25354 NM_000132.3(F8):c.6506G>A (p.Arg2169His) F8 Jan 01, 1995 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154863151 TTAACCCTCCAATTATTGCTCGATACATCCGTTTGCACCCAACTCATTATAGCATTCGCAG 62642565 105339 NM_000350.2(ABCA4):c.6329G>A (p.Trp2110Ter) ABCA4 Jan 01, 2015 MeSH:C535804,MedGen:C1855465,OMIM:248200;MedGen:CN517202 Stargardt disease 1;not provided unknown 1 94001059 GGATGGACCCCCAGGCACGCCGCATGCTGTGGAACGTCATCGTGAGCATCATCAGAGAAGG 796052351 202883 NM_017882.2(CLN6):c.297+1G>A CLN6 Jun 19, 2012 MedGen:CN517202 not provided germline 15 68214289 AACGTCATCACGCCCTTTCTCTTGCTCAAGGTACTGTCCCAGGGCCCCCACTCTCTCCTGT 398122825 48259 NM_000834.4(GRIN2B):c.1677G>A (p.Trp559Ter) GRIN2B Dec 21, 2012 MedGen:C3151411,OMIM:613970 Mental retardation, autosomal dominant 6 germline 12 13611828 TTCCTCAGAGCCATTCAGCGCTGACGTATGGGTGATGATGTTTGTGATGCTGCTCATCGTC 587779588 107136 NM_000090.3(COL3A1):c.962G>A (p.Gly321Asp) COL3A1 Jun 23, 2016 MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000;MedGen:CN517202 Ehlers-Danlos syndrome, type 4;not provided germline 2 188992194 ATGTAAACTTCTCTTTTTAGGGTGCTCGGGGTAATGACGGTGCTCGAGGCAGTGATGGTCA 121918544 20664 NM_001099274.1(TINF2):c.845G>A (p.Arg282His) TINF2 Jul 07, 2015 MedGen:C3151445,OMIM:613990;MedGen:C1327916,OMIM:268130,Orphanet:ORPHA3088 Dyskeratosis congenita, autosomal dominant, 3;Revesz syndrome de novo;germline 14 24240635 GGGCCTCCACTAGGGGAGGCCATAAGGAGCGCCCCACAGTCATGCTGTTTCCCTTTAGGAA -1 439506 NM_016653.2(MAP3K20):c.515G>A (p.Trp172Ter) MAP3K20 Nov 07, 2017 MedGen:CN596208,OMIM:617760 MYOPATHY, CENTRONUCLEAR, 6, WITH FIBER-TYPE DISPROPORTION germline 2 173191110 CACACATGTCCTTGGTTGGAACTTTCCCATGGATGGCTCCAGAAGTTATCCAGAGTCTCCC 74315463 18105 NM_000487.5(ARSA):c.467G>A (p.Gly156Asp) ARSA Jan 01, 1994 MedGen:C0023522,OMIM:250100,Orphanet:ORPHA512,SNOMED CT:396338004 Metachromatic leukodystrophy germline 22 50627051 CCAGCCCTCACGGCAGCTGCCCGCCTCAGGGCCCCTGCCAGAACCTGACCTGCTTCCCGCC 71640277 31009 NM_000515.4(GH1):c.291+1G>A GH1 Aug 01, 1999 MedGen:C0271567,OMIM:173100,Orphanet:ORPHA231679,SNOMED CT:237687003 Autosomal dominant isolated somatotropin deficiency germline 17 63918016 TCCAACAGGGAGGAAACACAACAGAAATCCGTGAGTGGATGCCTTCTCCCCAGGCGGGGAT 104886088 35693 NM_000495.4(COL4A5):c.973G>A (p.Gly325Arg) COL4A5 Aug 01, 2017 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917;MedGen:CN517202 Alport syndrome, X-linked recessive;not provided germline X 108582920 CCTGGTGATCCTGGTTACCCTGGTGAACCCGGAAGGGATGGTGAAAAGGTAAGAATTTTAA 370950728 186993 NM_000152.4(GAA):c.655G>A (p.Gly219Arg) GAA May 07, 2017 MedGen:C0017921,OMIM:232300,Orphanet:ORPHA365,SNOMED CT:124462004,SNOMED CT:237967002;MedGen:CN517202 Glycogen storage disease, type II;not provided germline;unknown 17 80105857 TACAGCGTGGAGTTCTCCGAGGAGCCCTTCGGGGTGATCGTGCGCCGGCAGCTGGACGGCC 72653787 426950 NM_001171.5(ABCC6):c.2263G>A (p.Gly755Arg) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16178950 CTTTTGTGGCCACAGGGCATGAATCTCTCCGGAGGCCAGAAGCAGCGGCTGAGCCTGGCCC 587783593 169934 NM_178151.2(DCX):c.95G>A (p.Ser32Asn) DCX Feb 08, 2013 Human Phenotype Ontology:HP:0002282,MedGen:C0008519 Heterotopia germline X 111410304 GGATGAATGGGTTGCCTAGCCCCACTCACAGCGCCCACTGTAGCTTCTACCGAACCAGAAC 397515547 76582 NM_004456.4(EZH2):c.2044G>A (p.Ala682Thr) EZH2 Jul 18, 2013 MedGen:C0265210,OMIM:277590,SNOMED CT:63119004 Weaver syndrome not provided 7 148809376 ACTTTTTTCTTTTTAGATTTTGTGGTGGATGCAACCCGCAAGGGTAACAAAATTCGTTTTG 121912450 29812 NM_000454.4(SOD1):c.64G>A (p.Glu22Lys) SOD1 Apr 01, 1994 MedGen:C1862939,OMIM:105400 Amyotrophic lateral sclerosis type 1 germline 21 31659833 GACGGCCCAGTGCAGGGCATCATCAATTTCGAGCAGAAGGCAAGGGCTGGGACGGAGGCTT 1131692234 424400 NM_015512.4(DNAH1):c.11788-1G>A DNAH1 Jul 20, 2017 MedGen:CN337166,OMIM:617576 SPERMATOGENIC FAILURE 18 germline 3 52397706 GGGGCTTCCATGTTGGCCTCCTCTCTCCTAGGGCTACCTCTCCTACATCAAGAGCCTCCCA 587777352 132657 NM_025132.3(WDR19):c.3565+1G>A WDR19 Jun 01, 2017 MedGen:C0265275,Orphanet:ORPHA474,SNOMED CT:75049004;MedGen:C4225376,OMIM:616307 Jeune thoracic dystrophy;Senior-Loken syndrome 8 germline;unknown 4 39273062 TGGCCAACAACATCAGCAAATTTCCATCACGTAAGTACCACTGACCAGAGCTCTCACCCAT 281865362 104897 NM_000330.3(RS1):c.626G>A (p.Arg209His) RS1 Aug 04, 2016 MedGen:CN517202 not provided germline X 18642053 TCCGCCTCATCCCGCTGGGCTGGCACGTCCGCATTGCCATCCGGATGGAGCTGCTGGAGTG -1 434370 NM_013227.3(ACAN):c.2026+1G>A ACAN Sep 28, 2017 Human Phenotype Ontology:HP:0010886,MedGen:C0029421,OMIM:165800,Orphanet:ORPHA2764,SNOMED CT:82562007 Osteochondritis dissecans germline 15 88849732 TGTCCCGGCACCATGCCTTCTGCTTCCGAGGTATGCAGCCTCACTTCGGCTCCAACAGCCC 876658556 233768 NM_000077.4(CDKN2A):c.44G>A (p.Trp15Ter) CDKN2A Dec 08, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 9 21974784 CGGGGAGCAGCATGGAGCCTTCGGCTGACTGGCTGGCCACGGCCGCGGCCCGGGGTCGGGT 121964852 27489 NM_152263.3(TPM3):c.503G>A (p.Arg168His) TPM3 May 02, 2017 MedGen:CN178536;MedGen:C0546264,OMIM:255310,Orphanet:ORPHA2020,SNOMED CT:240084007;MedGen:C0546264,OMIM:255310,Orphanet:ORPHA2020,SNOMED CT:240084007;MedGen:C1836448,OMIM:609284;MedGen:C1836448,OMIM:609284;MedGen:CN517202 Cap myopathy 1;Congenital myopathy with fiber type disproportion;Congenital myopathy with fiber type disproportion;Nemaline myopathy 1;Nemaline myopathy 1;not provided germline 1 154172971 TATACTGGGATCTTTTCCTGTAGGTGGCTCGTAAGTTGGTGATCATTGAAGGAGACTTGGA 118204070 16580 NM_000237.2(LPL):c.272G>A (p.Trp91Ter) LPL Jun 01, 1992 MedGen:C0023817,OMIM:238600,Orphanet:ORPHA309015,SNOMED CT:238086005,SNOMED CT:275598004 Hyperlipoproteinemia, type I germline 8 19951791 ATCTTCAGGTAACAGGAATGTATGAGAGTTGGGTGCCAAAACTTGTGGCCGCCCTGTACAA 1064796403 406866 NM_006772.2(SYNGAP1):c.3471G>A (p.Trp1157Ter) SYNGAP1 Feb 16, 2017 MedGen:CN517202 not provided germline 6 33444506 AATGCCAGCCTCTGAGCGGACAGTGGCCTGGGTCTCCAACATGCCTCACCTGTCGGCTGAC 201544686 94578 NM_133645.2(MTO1):c.1505G>A (p.Arg502His) MTO1 Nov 08, 2017 MedGen:C3553529,OMIM:614702,Orphanet:ORPHA314637;MedGen:CN517202 Combined oxidative phosphorylation deficiency 10;not provided germline;maternal 6 73482209 CCAGCCGAGTAGAGTTCCGTTTGTCACTGCGCCCTGATAATGCTGACAGCCGGCTCACACT 1060502629 404274 NM_004006.2(DMD):c.1653G>A (p.Trp551Ter) DMD Dec 31, 2016 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001;MedGen:CN517202 Duchenne muscular dystrophy;not provided germline X 32573796 AAACATCTGTAGATGGACAGAAGACCGCTGGGTTCTTTTACAAGACATCCTTCTCAAATGG 121917732 29242 NM_001085377.1(MCC):c.2087G>A (p.Arg696Gln) MCC Mar 15, 1991 MedGen:C0699790,OMIM:114500,SNOMED CT:269533000 Carcinoma of colon somatic 5 113064110 CTCAGATGCTCAAGCGAGCTCATGACTGCCGGAAGACAGCTGAGAACGCTGCCAAGGCCCT 771203198 226189 NM_000059.3(BRCA2):c.9318G>A (p.Trp3106Ter) BRCA2 Aug 03, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145;Human Phenotype Ontology:HP:0100013,MeSH:D001943,MedGen:C1458155,Orphanet:ORPHA180250,SNOMED CT:126926005 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome;Neoplasm of the breast germline 13 32394750 ATGTTACAATTTACTGGCAATAAAGTTTTGGATAGACCTTAATGAGGACATTATTAAGCCT 72664213 426831 NM_001171.5(ABCC6):c.3883-5G>A ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16155036 GGTCAGAGCAGGCCTTTCCTCCCAACCCCGGGCAGGTGGGCATCGTTGGCAGGACCGGGGC 786205232 188155 NM_004974.3(KCNA2):c.890G>A (p.Arg297Gln) KCNA2 Jul 26, 2017 MedGen:C4225350,OMIM:616366;MedGen:CN517202 Epileptic encephalopathy, early infantile, 32;not provided germline 1 110603893 CCATGTCACTGGCCATCCTCCGTGTCATCCGGTTGGTAAGAGTCTTTAGGATTTTCAAGTT 367543284 70572 NM_001017995.2(SH3PXD2B):c.401+1G>A SH3PXD2B Jun 01, 2014 MedGen:C1859406,OMIM:211170;MedGen:C1855305,OMIM:249420,Orphanet:ORPHA137834 Borrone Di Rocco Crovato syndrome;Frank Ter Haar syndrome germline 5 172382035 AAGACCTGAGGACCTGAATCCCCCCAAAGAGTAAGTTTGTTTGTGGGCTTCCCCAGATGGA 767586362 200449 NM_000030.2(AGXT):c.175G>A (p.Glu59Lys) AGXT Nov 27, 2014 MedGen:C0268164,OMIM:259900,Orphanet:ORPHA93598,SNOMED CT:65520001 Primary hyperoxaluria, type I germline 2 240869179 CCCTATACCACCCGCATGCAGATCATGGACGAGATCAAGGAAGGCATCCAGTACGTGTTCC 121913632 52060 NM_000257.3(MYH7):c.2221G>A (p.Gly741Arg) MYH7 Apr 20, 2017 MedGen:CN230736;Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Cardiovascular phenotype;Hypertrophic cardiomyopathy;Primary familial hypertrophic cardiomyopathy;not provided germline 14 23425760 CCTGAGGGACAGTTCATTGATAGCAGGAAGGGGGCAGAGAAGCTGCTCAGCTCCCTGGACA 121434544 32653 NM_000070.2(CAPN3):c.1715G>A (p.Arg572Gln) CAPN3 May 24, 2017 MedGen:C1869123,OMIM:253600,Orphanet:ORPHA267 Limb-girdle muscular dystrophy, type 2A germline 15 42402972 AGCCCCACCAGGAGGGGGAATTCATCCTCCGGGTCTTCTCTGAAAAGAGGAACCTCTCTGA -1 446879 NM_001142966.2(GREB1L):c.983G>A (p.Arg328Gln) GREB1L Dec 18, 2017 MedGen:CN703737,OMIM:617805 RENAL HYPODYSPLASIA/APLASIA 3 germline 18 21440302 CCATGTTCATTTCTGGGCCACCAAAGAAACGACACCGGGGATGGTATCCTGGGTCACCTCT -1 481329 NM_020745.3(AARS2):c.2356G>A (p.Ala786Thr) AARS2 Sep 08, 2017 MedGen:C3279793,OMIM:614096,Orphanet:ORPHA319504 Combined oxidative phosphorylation deficiency 8 paternal 6 44302810 ACCCGCCTGCTGGCCGTCACTGGGGAGCAGGCCCAGCAGGTCAGCATGCCAGTAGGCCTGG 483352778 106572 NM_000255.3(MUT):c.323G>A (p.Arg108His) MUT Dec 21, 2016 MedGen:C1855115;MedGen:CN517202 METHYLMALONIC ACIDURIA, mut(0) TYPE;not provided germline 6 49459144 CCATGTATACCTTTAGGCCCTGGACCATCCGCCAGTATGCTGGTTTTAGTACTGTGGAAGA 80359004 46672 NM_000059.3(BRCA2):c.7758G>A (p.Trp2586Ter) BRCA2 Sep 19, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline 13 32357882 AAAAGGAATACAGTTGGCTGATGGTGGATGGCTCATACCCTCCAATGATGGAAAGGCTGGA 1085307462 415798 NM_004187.3(KDM5C):c.1557G>A (p.Trp519Ter) KDM5C May 02, 2017 MedGen:CN517202 not provided germline X 53210702 AGCCTTTTGCTGGCATATTGAGGATCACTGGAGTTACTCCATTAACTACCTCCACTGGTGA 374536346 359230 NM_206933.2(USH2A):c.486-14G>A USH2A Jul 01, 2015 MedGen:CN517202 not provided germline 1 216418693 GGTTGGATGCTGACCTTTTCTCTCTTTTCCGGTTGCTTCCTAAGGTGTGTTATAGAAAAGA -1 446679 NM_000377.2(WAS):c.778-6G>A WAS Aug 02, 2017 MedGen:CN517202 not provided germline X 48688294 TCTACTCCTGCCCCTGGCCTTTTTCCTCCTGGGCAGGTGAACAACCTCGACCCAGATCTGC 1057516093 354015 NM_172107.3(KCNQ2):c.757G>A (p.Ala253Thr) KCNQ2 Mar 31, 2016 MedGen:C3150986,OMIM:613720,Orphanet:ORPHA439218 Early infantile epileptic encephalopathy 7 germline 20 63442465 CTCATCCTGGCCTCGTTCCTGGTGTACTTGGCAGAGAAGGGGGAGAACGACCACTTTGACA 863223854 209633 NM_003242.5(TGFBR2):c.1564G>A (p.Asp522Asn) TGFBR2 Mar 30, 2014 MedGen:CN517202 not provided germline 3 30691459 ATGGTGTGTGAGACGTTGACTGAGTGCTGGGACCACGACCCAGAGGCCCGTCTCACAGCCC 727503794 177466 NM_000018.3(ACADVL):c.1532+1G>A ACADVL Apr 14, 2014 MedGen:C3887523,OMIM:201475,Orphanet:ORPHA26793,SNOMED CT:237996001,SNOMED CT:237997005 Very long chain acyl-CoA dehydrogenase deficiency germline 17 7224244 GCTAGGAGAGGCAGGCAAACAGCTGAGGCGGTAGGCTTAGGGCCAGAGCCAGGGGAGGGCA 201799893 132588 NM_000343.3(SLC5A1):c.1673G>A (p.Arg558His) SLC5A1 Jan 01, 2011 MedGen:C0268186,OMIM:606824,Orphanet:ORPHA35710,SNOMED CT:27943000 Congenital glucose-galactose malabsorption germline 22 32104793 GACCTGTTCTGCCTTCTCTGCAGCTCTACCGTCTGTGTTGGAGCCTGCGCAACAGCAAAGA 137852353 25394 NM_001161529.1(CSF2RA):c.586G>A (p.Gly196Arg) CSF2RA Nov 24, 2008 MedGen:C2677877,OMIM:300770 Surfactant metabolism dysfunction, pulmonary, 4 germline X 1290449 TTAACGTCTCGCAATTACTTTCTGGTTAACGGAACCAGCCGAGAAATTGGCATCCAATTCT 132630284 260274 NM_000533.4(PLP1):c.607G>A (p.Asp203Asn) PLP1 May 13, 2016 MedGen:CN517202 not provided germline X 103787951 ACCTCTGCCAGTATAGGCAGTCTCTGTGCTGATGCCAGAATGTATGGTGAGTTAGGGTACG 746219370 216056 NM_052845.3(MMAB):c.572G>A (p.Arg191Gln) MMAB Jan 07, 2016 MedGen:C1855102,OMIM:251110,Orphanet:ORPHA79311 Methylmalonic aciduria cblB type germline 12 109561052 CGCTGCATTTCTGCCGGGCCGTGTGCCGCCGGGCCGAGAGACGGTAAGAGGGCTGGAGAGA 879254965 246247 NM_000527.4(LDLR):c.1633G>A (p.Gly545Arg) LDLR Mar 30, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline;unknown 19 11116140 GACTGGGGAACTCCCGCCAAGATCAAGAAAGGGGGCCTGAATGGTGTGGACATCTACTCGC 387906287 17905 NM_001171507.2(MCFD2):c.309+1G>A MCFD2 Jun 01, 2003 MedGen:C3150889,OMIM:613625 Factor v and factor viii, combined deficiency of, 2 germline 2 46907809 TCCACAGCCATCACTCATGTCCATAAGGAGGTAGGTCTGGCAGTGGCTTGGGGGACTGTAT -1 32268 NM_000090.3(COL3A1):c.889G>A (p.Gly297Arg) COL3A1 Mar 01, 2003 MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188991523 AATGGTCTTCCAGGCGAAAATGGAGCTCCTGGACCCATGGTAATTATGTTTCTTATGTATA 431905511 102896 NM_000345.3(SNCA):c.152G>A (p.Gly51Asp) SNCA Apr 01, 2013 MedGen:C1868595,OMIM:168601 Parkinson disease 1 germline 4 89828154 GCTCCAAAACCAAGGAGGGAGTGGTGCATGGTGTGGCAACAGGTAAGCTCCATTGTGCTTA 587779673 107177 NM_000090.3(COL3A1):c.998G>A (p.Gly333Asp) COL3A1 May 02, 2016 MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188992888 GCTCTTGAAATTGTATTTAATTTTTTCAGGGCCCTCCTGGTCCTCCTGGAACTGCCGGATT 398122947 79348 NM_000394.3(CRYAA):c.292G>A (p.Gly98Arg) CRYAA Jul 12, 2006 MedGen:C1858679,OMIM:604219 Cataract, autosomal dominant germline 21 43170619 AAGGTGCAGGACGACTTTGTGGAGATCCACGGAAAGCACAACGAGCGCCAGGTGAGCCCAG 151344474 79268 NM_000397.3(CYBB):c.1223G>A (p.Gly408Glu) CYBB Feb 26, 2016 MedGen:CN517202 not provided germline X 37805077 TGTTCAGCTATGAGGTGGTGATGTTAGTGGGAGCAGGGATTGGGGTCACACCCTTCGCATC 387906728 38948 NM_003336.3(UBE2A):c.32G>A (p.Arg11Gln) UBE2A Jun 01, 2010 MedGen:C3275464,OMIM:300860,Orphanet:ORPHA163956 Syndromic mental retardation, Nascimento type, X-linked germline X 119574743 TGTCCACCCCGGCTCGGCGGCGCCTCATGCGGGACTTCAAGAGGTAAACCGAGGGGACGGC 201539845 38879 NM_000260.3(MYO7A):c.652G>A (p.Asp218Asn) MYO7A Nov 09, 2015 MedGen:C1832475,OMIM:601317;MedGen:C1568247,OMIM:276900,Orphanet:ORPHA231169 Deafness, autosomal dominant 11;Usher syndrome, type 1 germline 11 77156921 GACAACTCAAGCCGTTTCGGAAAGTACATCGACATCCACTTCAACAAGCGGGGCGCCATCG 267608677 40101 NM_007055.3(POLR3A):c.1909+18G>A POLR3A Jan 08, 2016 MedGen:C1843200,OMIM:607694;MedGen:CN517202 Hypomyelinating leukodystrophy 7;not provided germline 10 78009519 GCCAATGATTCCTGTGAGTGGACGGAACTCGGGTGGGGAGAAGGAGGAACGTGACAGAAAA 121913678 28906 NM_005249.4(FOXG1):c.765G>A (p.Trp255Ter) FOXG1 Mar 04, 2009 MedGen:C3150705,OMIM:613454 Rett syndrome, congenital variant germline;unknown 14 28768044 CTACGACGACCCGGGCAAGGGCAACTACTGGATGCTGGACCCGTCGAGCGACGACGTGTTC 267607164 22005 NM_006086.3(TUBB3):c.1249G>A (p.Asp417Asn) TUBB3 Jan 14, 2016 MedGen:C2748801,OMIM:600638 Fibrosis of extraocular muscles, congenital, 3a, with or without extraocular involvement germline 16 89935700 GAGTTCACCGAGGCCGAGAGCAACATGAACGACCTGGTGTCCGAGTACCAGCAGTACCAGG 398122392 76976 NM_020989.3(CRYGC):c.470G>A (p.Trp157Ter) CRYGC Jan 01, 2009 MedGen:C1852438,OMIM:604307 Cataract, coppock-like germline 2 208128258 GGCCCCAAGAGTACAGGCGGTGCCAGGACTGGGGGGCCATGGATGCTAAGGCAGGCTCTTT 28936687 23292 NM_000020.2(ACVRL1):c.632G>A (p.Gly211Asp) ACVRL1 Dec 01, 2003 MedGen:C1832529 Pulmonary arterial hypertension related to hereditary hemorrhagic telangiectasia germline 12 51914445 CTCACCTTCCCCTCTGGCCATCAGGAAAAGGCCGCTATGGCGAAGTGTGGCGGGGCTTGTG 121908532 21046 NM_014251.2(SLC25A13):c.1763G>A (p.Arg588Gln) SLC25A13 Mar 27, 2008 MedGen:C1863844,OMIM:603471,Orphanet:ORPHA247585 Citrullinemia type II germline 7 96121733 TTCTCCATTTTTTTAAAGCTCGTGTATTTCGATCCTCACCCCAGTTTGGTGTAACTTTGCT 121918214 16094 NM_001080432.2(FTO):c.947G>A (p.Arg316Gln) FTO Jul 01, 2009 MedGen:C2752001,OMIM:612938 Growth retardation, developmental delay, coarse facies, and early death germline 16 53873837 AACACTGTGTTTTGGCCGGTTCACAACCTCGGTTTAGTTCCACCCACCGAGTGGCAGAGGT 797044995 204991 NM_032856.3(WDR73):c.287G>A (p.Arg96Lys) WDR73 Jun 29, 2015 MedGen:C0795949,OMIM:251300 Galloway-Mowat syndrome germline 15 84648537 TCTTTGATCTAAAGCATGTGCCACATACCAGGTATGGTCAATTTTGTGATCCAGCCATCCA 80338890 34223 NM_003227.3(TFR2):c.2137-1G>A TFR2 Jun 09, 2011 MedGen:C1858664,OMIM:604250,Orphanet:ORPHA225123 Hemochromatosis type 3 not provided 7 100621127 CAACCCTGACCTGATCCCCCTCTCTGCGCAGGTGGAGTTCTACTTCCTTTCCCAGTACGTG 527236064 152829 NM_001142800.1(EYS):c.7793G>A (p.Gly2598Asp) EYS - Human Phenotype Ontology:HP:0000547,MeSH:D012174,MedGen:C0035334,OMIM:268000,Orphanet:ORPHA791,SNOMED CT:28835009 Retinitis pigmentosa not provided 6 63778111 GCCATTTCAGAGGACTGGGAAATCCTGAGGGCCACCCAAATGCTGGACGCAGTGTTGGCCA 121918318 21766 NM_003165.3(STXBP1):c.539G>A (p.Cys180Tyr) STXBP1 Jun 01, 2008 MedGen:C2677326,OMIM:612164 Early infantile epileptic encephalopathy 4 germline 9 127663314 AGCGCCTGGCAGAGCAGATCGCGACCCTTTGTGCCACCCTGAAGGAGTACCCGGCTGTGCG 267606861 29951 NM_002112.3(HDC):c.951G>A (p.Trp317Ter) HDC Jan 08, 2014 Gene:2973,MedGen:C0040517,OMIM:137580 Tourette Syndrome germline 15 50252520 AGCCACTAATGCCCATTTGGAAACCCACAGGGTCAAGGACAAGTACAAGCTGCAGCAGACC 1131691205 421109 NM_177438.2(DICER1):c.4140G>A (p.Trp1380Ter) DICER1 Dec 22, 2014 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 14 95099846 GGTGTCAATATTTGATCCCCCTGTGAATTGGCTTCCTCCTGGTTATGTAGTAAATCAAGAC 120074153 17863 NM_017890.4(VPS13B):c.7934G>A (p.Gly2645Asp) VPS13B Jul 01, 2004 MedGen:C0265223,OMIM:216550,Orphanet:ORPHA193,SNOMED CT:56604005 Cohen syndrome germline 8 99784394 GTAATGACACACAGGAGACACTGCGGTTTGGCCAGGTGGATACTGATGAAAATATTCTGCT 199472926 197259 NM_000238.3(KCNH2):c.1704G>A (p.Trp568Ter) KCNH2 Nov 13, 2015 MedGen:CN517202 not provided germline 7 150951689 GCTCATCGCGCACTGGCTAGCCTGCATCTGGTACGCCATCGGCAACATGGAGCAGCCACAC 45468292 58731 NM_000548.4(TSC2):c.2546-1G>A TSC2 Jul 06, 2016 MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000;MedGen:CN517202 Tuberous sclerosis syndrome;not provided germline 16 2075798 GCTCCCCTGACCACCCTCTCCATTACCGCAGCTCTGGCCAGGCTGCCGCACCTCTACAGGA 72658185 407278 NM_000089.3(COL1A2):c.2314G>A (p.Gly772Ser) COL1A2 May 23, 2017 MedGen:C0268335,OMIM:130000,Orphanet:ORPHA287,SNOMED CT:20766005,SNOMED CT:83470009;MedGen:C0023931,OMIM:166200,SNOMED CT:385482004;MedGen:CN517202 Ehlers-Danlos syndrome, classic type;Osteogenesis imperfecta type I;not provided germline 7 94421027 GTTTGCATTTAGGGTCCAAATGGTCCCCCCGGTCCTGCTGGAAGTCGTGGTGATGGAGGCC 1135401810 424659 NM_015335.4(MED13L):c.5588+1G>A MED13L Jan 06, 2017 MedGen:C4225208,OMIM:616789,Orphanet:ORPHA369891 Mental retardation and distinctive facial features with or without cardiac defects de novo 12 115975514 CTGCGTTGTAAATATTGCTTTACCAAACAGGTGAGAAGACTTGATGTTTATGGTGCATGTA 957828732 427078 NM_001171.5(ABCC6):c.268G>A (p.Ala90Thr) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16219899 ATAGTCCTGTGTACCTCCAGCGTGGCTGTCGCTCTTTGGAAAATCCAACAGGGAACGCCTG 1085307195 414126 NM_001204.6(BMPR2):c.248G>A (p.Gly83Glu) BMPR2 - MedGen:C0152171,OMIM:178600,SNOMED CT:26174007 Primary pulmonary hypertension germline 2 202467519 CTCCTTTTTTGTATTCATATTGATTTATAGGATGTTGGTCTCACATTGGAGATCCCCAAGA 1057518736 359051 NM_001204527.1(SSR4):c.442-1G>A SSR4 Nov 28, 2016 MedGen:C4012395,OMIM:300934,Orphanet:ORPHA370927 Congenital disorder of glycosylation type 1y germline X 153798328 CTGAGCTGGCTTGTGATCTCCTTTTTTTCAGGGCACTTGGAACGGGCCCTGGGTGTCCACT 398123102 98228 NM_000033.3(ABCD1):c.1553G>A (p.Arg518Gln) ABCD1 Oct 08, 2012 MedGen:C0162309,OMIM:300100,Orphanet:ORPHA43,SNOMED CT:65389002 Adrenoleukodystrophy germline X 153740156 CCAATGGCTGCGGCAAGAGCTCCCTGTTCCGGATCCTGGGTGGGCTCTGGCCCACGTACGG -1 416973 NM_000314.6(PTEN):c.253+5G>A PTEN May 26, 2017 MedGen:CN072330,OMIM:158350 Cowden syndrome 1 germline 10 87931094 TGACACCGCCAAATTTAATTGCAGAGGTAGGTATGAATGTACTGTACTATGTTGTATAACT 886037620 27361 NC_000008.11:g.11474238G>A BLK Aug 25, 2009 MedGen:C3150618,OMIM:613375 Maturity-onset diabetes of the young, type 11 germline 8 11474238 TCTTGGTTTGCGCACCACCTGGAAAGGGGTGTGGCTTTCACTCATTCTGGTACCAGGCACA 1060503154 398968 NM_000192.3(TBX5):c.443G>A (p.Trp148Ter) TBX5 May 22, 2016 MedGen:C3542024,OMIM:614823 Aortic valve disease 2 germline 12 114398640 ACCCAGACTCCCCCGCCACCGGGGCGCATTGGATGAGGCAGCTCGTCTCCTTCCAGAAACT 397514616 179078 NM_003280.2(TNNC1):c.91G>A (p.Ala31Thr) TNNC1 Apr 15, 2014 MedGen:CN517202 not provided germline 3 52452217 AAGGCAGCCTTCGACATCTTCGTGCTGGGCGCTGAGGATGGCTGCATCAGCACCAAGGAGC 794726675 28890 NM_000222.2(KIT):c.1879+1G>A KIT Nov 01, 1992 Human Phenotype Ontology:HP:0007443,MedGen:C0080024,OMIM:172800,Orphanet:ORPHA2884,SNOMED CT:6479008 Partial albinism germline 4 54727928 CCATGACTGTCGCTGTAAAGATGCTCAAGCGTAAGTTCCTGTATGGTACTGCATGCGCTTG 104894678 31757 NM_001985.2(ETFB):c.382G>A (p.Asp128Asn) ETFB Jul 01, 2003 MedGen:C3278155 Glutaric acidemia IIB germline 19 51350385 AGTCTTCTGTCTCTCCCCATTCAGGCCATCGATGATGACTGTAACCAGACAGGGCAGATGA 121908751 22220 NM_000492.3(CFTR):c.274G>A (p.Glu92Lys) CFTR Jun 13, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline;unknown 7 117530899 TTTAATTTCTCTGTTTTTCCCCTTTTGTAGGAAGTCACCAAAGCAGTACAGCCTCTCTTAC 121908627 21067 NM_005476.5(GNE):c.2086G>A (p.Val696Met) GNE Jul 18, 2017 MedGen:C1833373,OMIM:600737;MedGen:C1853926,OMIM:605820;MedGen:C1853926,OMIM:605820;MedGen:C1853926,OMIM:605820;MedGen:C0342853,OMIM:269921,Orphanet:ORPHA3166,SNOMED CT:238051008;MedGen:C0342853,OMIM:269921,Orphanet:ORPHA3166,SNOMED CT:238051008;MedGen:CN517202 Inclusion body myopathy 2;Nonaka myopathy;Nonaka myopathy;Nonaka myopathy;Sialuria;Sialuria;not provided germline;paternal 9 36217448 CAGGCCTTGTCCTCCGTGCAGGACGTGGATGTGGTGGTTTCGGATTTGGTTGACCCCGCCC 121907959 18941 NM_000520.5(HEXA):c.749G>A (p.Gly250Asp) HEXA Jan 01, 1992 MedGen:C1848913 Tay-sachs disease, juvenile germline 15 72350574 AGGAGGTCATTGAATACGCACGGCTCCGGGGTATCCGTGTGCTTGCAGAGTTTGACACTCC 587777864 166365 NM_001126128.1(PROK2):c.101G>A (p.Cys34Tyr) PROK2 Sep 01, 2008 MedGen:C1857720,OMIM:610628 Kallmann syndrome 4 germline 3 71781588 TTATCTGTTTGTTTATTACATTTCAGGCTTGTGACAAGGACTCCCAATGTGGTGGAGGCAT 397515353 19295 NM_000784.3(CYP27A1):c.845-1G>A CYP27A1 Mar 08, 2016 MedGen:C0238052,OMIM:213700,Orphanet:ORPHA909,SNOMED CT:63246000;MedGen:CN517202 Cholestanol storage disease;not provided germline 2 218812923 TGTCCTTTCCTCTTCTCTGTTGCTTTCACAGGGAAGAAGCTGATTGATGAGAAGCTCGAAG 875989922 228170 NM_000527.4(LDLR):c.1469G>A (p.Trp490Ter) LDLR Mar 25, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11113645 CTGTGGACTGGATCCACAGCAACATCTACTGGACCGACTCTGTCCTGGGCACTGTCTCTGT 587777605 153582 NM_012216.3(MID2):c.1040G>A (p.Arg347Gln) MID2 Jan 01, 2014 MedGen:C3890168,OMIM:300928 Mental retardation, X-linked 101 germline X 107905593 AGCATATCCTGAAAGAAAATGACCAGGCACGGTTTCTACAGTCTGCAAAAAATATTGCTGA 779692470 213951 NM_000888.4(ITGB6):c.898G>A (p.Glu300Lys) ITGB6 - MedGen:CN233177 Adolescent alopeciam dentogingival abnormalitites and intellectual disability germline 2 160172592 GACGGGCTCTGTCACTTGGACAGCAAGAATGAATACTCCATGTCAACTGTCTTGGTGTGTA 748309520 213916 NM_003119.3(SPG7):c.988-1G>A SPG7 Apr 04, 2017 MedGen:C1846564,OMIM:607259,Orphanet:ORPHA99013 Spastic paraplegia 7 germline 16 89531903 AGTTAGTGTTGCATTGTCTGCTGCCGTCCAGAGCCCAGAACGCTTCCTCCAGCTTGGCGCC 80358871 66726 NM_000059.3(BRCA2):c.631G>A (p.Val211Ile) BRCA2 Feb 27, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline;unknown 13 32326613 CCACCCACCCTTAGTTCTACTGTGCTCATAGGTAATAATAGCAAATGTGTATTTACAAGAA 113994207 19490 NM_004937.2(CTNS):c.589G>A (p.Gly197Arg) CTNS May 22, 2017 MedGen:C1857413,OMIM:219750;MedGen:C0010690,OMIM:219800;MedGen:CN517202 Cystinosis, ocular nonnephropathic;Nephropathic cystinosis;not provided germline;unknown 17 3656703 CAGGAGCAGTTTCTCCTCAAATACCCCAACGGAGTGAACCCCGTGAACAGCAACGACGTCT 587779723 107243 NM_000090.3(COL3A1):c.2914G>A (p.Gly972Ser) COL3A1 Oct 24, 2016 MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189004347 CCAGGCATGCCAGGTCCTAGGGGAAGCCCTGGCCCTCAGGGTGTCAAGGTGAGTATAGTCA -1 485808 NM_000061.2(BTK):c.371G>A (p.Trp124Ter) BTK Jan 24, 2017 MedGen:C1832241,OMIM:601495,Orphanet:ORPHA33110;MedGen:C0221026,OMIM:300755,Orphanet:ORPHA47,SNOMED CT:65880007 Agammaglobulinemia, non-Bruton type;X-linked agammaglobulinemia germline X 101370018 TCTCCCCAACTGAAGAACTAAGGAAGCGGTGGATTCACCAGCTCAAAAACGGTGAGAATTA 137852399 25226 NM_000132.3(F8):c.832G>A (p.Gly278Arg) F8 Jan 01, 1995 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154969508 CACAGGAAATCAGTCTATTGGCATGTGATTGGAATGGGCACCACTCCTGAAGTGCACTCAA 63750396 95985 NM_000251.2(MSH2):c.1035G>A (p.Trp345Ter) MSH2 Oct 12, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Lynch syndrome;not provided germline;unknown 2 47416388 CCCTCAAGGACAAAGACTTGTTAACCAGTGGATTAAGCAGCCTCTCATGGATAAGAACAGA 104894828 25754 NM_000169.2(GLA):c.902G>A (p.Arg301Gln) GLA Nov 28, 2016 MedGen:CN230736;Human Phenotype Ontology:HP:0001071,MedGen:C0002986,OMIM:301500,Orphanet:ORPHA324,SNOMED CT:16652001;MedGen:C1970820 Cardiovascular phenotype;Fabry disease;Fabry disease, cardiac variant germline X 101398467 CTGCTCCTTTATTCATGTCTAATGACCTCCGACACATCAGCCCTCAAGCCAAAGCTCTCCT 199682486 101428 NM_013339.3(ALG6):c.257+5G>A ALG6 Oct 09, 2017 MedGen:C2930997,OMIM:603147,Orphanet:ORPHA79320;MedGen:CN517202 Congenital disorder of glycosylation type 1C;not provided germline;paternal;unknown 1 63402348 TATCATAGTCTCCTATGTGCATATGTGTAAGTTTTTCTTTCTTAATGTAACTCTAAATTTT 28941468 17768 NM_004183.3(BEST1):c.896G>A (p.Gly299Glu) BEST1 Jul 01, 1998 MedGen:C0339510,OMIM:153700,Orphanet:ORPHA1243,SNOMED CT:90036004;MedGen:CN517202 Vitelliform macular dystrophy type 2;not provided germline 11 61959526 AGGTGGCAGAGCAGCTCATCAACCCCTTTGGAGAGGATGATGATGATTTTGAGACCAACTG 122453120 26730 NM_004484.3(GPC3):c.1705G>A (p.Ala569Thr) GPC3 Jan 09, 2012 MedGen:CN033288,OMIM:194070 Wilms tumor 1 somatic X 133536162 CATTCCCCGCTGAAGCTTCTCACCAGCATGGCCATCTCGGTGGTGTGCTTCTTCTTCCTGG 879254076 244621 NM_000051.3(ATM):c.5573G>A (p.Trp1858Ter) ATM Jan 16, 2017 MedGen:CN517202 not provided germline 11 108304751 ATATTTTACTCCAAGATACAAATGAATCATGGAGAAATCTGCTTTCTACACATGTTCAGGG 398124145 100946 NM_004380.2(CREBBP):c.3982+1G>A CREBBP Aug 17, 2015 MedGen:C0035934,OMIM:180849,Orphanet:ORPHA353277,SNOMED CT:45582004;MedGen:CN517202 Rubinstein-Taybi syndrome;not provided germline 16 3744893 CTCGAAAAGAAAACAAATTCAGTGCTAAGAGTAAGTTTCGGGAAGCTTTCTGTTTCCTGGA 398123256 98541 NM_000203.4(IDUA):c.1650+5G>A IDUA Dec 06, 2012 Human Phenotype Ontology:HP:0000943,MedGen:C0086795,OMIM:607014,Orphanet:ORPHA93473 Hurler syndrome germline 4 1003475 CGCGCCCCGAGAAGCCGCCCGGGCAGGCAAGTGGCAGTCCCCTAACCCGCGCCGCGGCCCG 267606863 25076 NM_000194.2(HPRT1):c.580G>A (p.Asp194Asn) HPRT1 Jun 01, 1990 MedGen:C0023374,OMIM:300322,SNOMED CT:10406007 Lesch-Nyhan syndrome germline X 134498655 CCAGACAAGTTTGTTGTAGGATATGCCCTTGACTATAATGAATACTTCAGGGATTTGAATG 72664302 426870 NM_001171.5(ABCC6):c.3506+15G>A ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16162978 GACTGGTGGCTGACAGGTAGGAAGAGCCAGGGCAGAGAAGACCTTGCAATTCATCCATATC 1057517711 360088 NM_000719.6(CACNA1C):c.1553G>A (p.Arg518His) CACNA1C Apr 19, 2017 MedGen:C3495498,OMIM:192600;MedGen:CN517202 Familial hypertrophic cardiomyopathy 1;not provided germline 12 2566466 GGTGGAATCGGTTCTGCAGAAGGAAGTGCCGCGCCGCAGTCAAGTCTAATGTCTTCTACTG 879254517 245547 NM_000527.4(LDLR):c.415G>A (p.Asp139Asn) LDLR Mar 25, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11105321 GACTCAGACCGGGACTGCTTGGACGGCTCAGACGAGGCCTCCTGCCCGGTGCTCACCTGTG 786205088 23769 NM_000182.4(HADHA):c.180+1G>A HADHA May 01, 1995 MedGen:C0342786,OMIM:609015,SNOMED CT:237999008 Mitochondrial trifunctional protein deficiency germline 2 26238933 GTTGTTCGAATTAACTCTCCCAATTCAAAGGTATCTCATTTAATTTGCAGTTTTTTTCTGC 397515349 18802 NM_000375.2(UROS):c.-26-183G>A UROS Apr 07, 2016 MedGen:C0162530,OMIM:263700,Orphanet:ORPHA79277 Congenital erythropoietic porphyria germline 10 125816708 TGATATCAACTGCTAACATGCTCTTTCTTGGCCTTATCAGTGACAGGGGTCTTCAGAAAGA 863224011 210707 NM_000143.3(FH):c.133-1G>A FH Jan 17, 2017 Human Phenotype Ontology:HP:0007437,MedGen:C1708350,OMIM:150800,Orphanet:ORPHA523 Multiple cutaneous leiomyomas germline 1 241517317 ACTTGTAATAGTGTTGTATTCTTGTCTTTAGGCAAGCCAAAATTCCTTCCGGATAGAATAT 104886117 35756 NM_000495.4(COL4A5):c.1472G>A (p.Gly491Glu) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108595557 GCTTCAACTGCATTGGAACTGGTATTTCAGGGCCTCCAGGTCAACCTGGTTTGCCAGGTCT 61750072 106207 NM_000552.4(VWF):c.4121G>A (p.Arg1374His) VWF Sep 22, 2016 MedGen:CN517202 not provided germline 12 6019297 CACTGTTCCAAATCTTCAGCAAGATCGACCGCCCTGAAGCCTCCCGCATCACCCTGCTCCT -1 485835 NM_000044.4(AR):c.1688G>A (p.Cys563Tyr) AR Oct 03, 2011 MedGen:C0039585,OMIM:300068,SNOMED CT:12313004 Androgen resistance syndrome germline X 67643327 ACTTTCCACCCCAGAAGACCTGCCTGATCTGTGGAGATGAAGCTTCTGGGTGTCACTATGG 1064794216 410545 NM_000435.2(NOTCH3):c.3182G>A (p.Cys1061Tyr) NOTCH3 Feb 24, 2017 MedGen:CN517202 not provided germline 19 15180217 TGGAGCAGCTGTGTCAGGCGGGTGGGCAGTGTGTGGATGAAGACAGCTCCCACTACTGCGT 797045342 209233 NM_000052.6(ATP7A):c.1950G>A (p.Trp650Ter) ATP7A Feb 08, 2013 MedGen:C0022716,OMIM:309400,Orphanet:ORPHA565,SNOMED CT:59178007 Menkes kinky-hair syndrome germline X 78011452 TTTCTTTTTTTATTTTTTCCATATAAGATGGAGACGGTCTTTTCTTGTGAGTCTGTTTTTC 119481078 19918 NM_000197.1(HSD17B3):c.166G>A (p.Ala56Thr) HSD17B3 Aug 01, 1998 MedGen:C0268296,OMIM:264300,Orphanet:ORPHA752,SNOMED CT:50658006 Testosterone 17-beta-dehydrogenase deficiency germline 9 96298451 GCATTCTTGCTTTTCACAGTGATCACTGGAGCAGGCGATGGAATTGGGAAAGCGTACTCGT 147901432 343464 NM_000339.2(SLC12A3):c.1925G>A (p.Arg642His) SLC12A3 Jun 14, 2016 MedGen:C0268450,OMIM:263800,Orphanet:ORPHA358,SNOMED CT:3188003 Familial hypokalemia-hypomagnesemia germline 16 56885364 ATGAGGTGGAAGACCACATCAAGAACTACCGGTGAGCAGAGCTGCTGGGACCCACCTGGGA 724160021 172150 NM_004208.3(AIFM1):c.1265G>A (p.Arg422Gln) AIFM1 Aug 01, 2015 Gene:751798,MedGen:C1845095,OMIM:300614,Orphanet:ORPHA139583 Deafness, X-linked 5 germline;unknown X 130136085 TGGAAATAGACTCAGATTTTGGTGGCTTCCGGGTAAATGCAGAGCTACAAGCACGCTCTAA 142083484 481194 NM_145869.1(ANXA11):c.112G>A (p.Gly38Arg) ANXA11 Jan 30, 2018 MedGen:CN778765,OMIM:617839 AMYOTROPHIC LATERAL SCLEROSIS 23 germline 10 80170859 TACCCTCCTCCGCCCAGCATGCCCCCCATCGGGCTGGATAACGTGGCCACCTATGCGGGGC 59270054 77779 NM_170707.3(LMNA):c.244G>A (p.Glu82Lys) LMNA Mar 25, 2017 MedGen:CN043576;EFO:EFO_0000407,Human Phenotype Ontology:HP:0001644,MedGen:C0007193,Orphanet:ORPHA217604,SNOMED CT:195021004;MedGen:CN517202 Charcot-Marie-Tooth disease, type 2;Primary dilated cardiomyopathy;not provided germline 1 156115162 CGCGAGGTGTCCGGCATCAAGGCCGCCTACGAGGCCGAGCTCGGGGATGCCCGCAAGACCC 113436208 77776 NM_170707.3(LMNA):c.1968+1G>A LMNA Aug 01, 2015 MedGen:C0033300,OMIM:176670,Orphanet:ORPHA740,SNOMED CT:238870004;MedGen:C0406585,OMIM:275210,Orphanet:ORPHA1662,SNOMED CT:400128006;MedGen:CN517202 Hutchinson-Gilford syndrome;Lethal tight skin contracture syndrome;not provided germline 1 156138758 CTCCTGGGCAACTCCAGCCCCCGAACCCAGGTGAGTTGTCTCTGCTTTGTCTCCAAATCCT 137853861 34025 NM_000403.3(GALE):c.905G>A (p.Gly302Asp) GALE Jan 25, 2011 MedGen:C0751161,OMIM:230350,Orphanet:ORPHA79238,SNOMED CT:8849004 UDPglucose-4-epimerase deficiency not provided 1 23796234 TCCCGTACAAGGTGGTGGCACGGCGGGAAGGTGATGTGGCAGCCTGTTACGCCAACCCCAG 104894503 27495 NM_001018005.1(TPM1):c.523G>A (p.Asp175Asn) TPM1 Aug 25, 2017 MedGen:C1861863,OMIM:115196;Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Familial hypertrophic cardiomyopathy 3;Hypertrophic cardiomyopathy;Primary familial hypertrophic cardiomyopathy;not provided germline 15 63060899 GTGGCCCGTAAGCTGGTCATCATTGAGAGCGACCTGGAACGTGCAGAGGAGCGGGCTGAGC -1 434794 NM_004366.5(CLCN2):c.515G>A (p.Arg172Gln) CLCN2 Sep 25, 2017 Gene:79179,MedGen:C1854107,OMIM:605635,Orphanet:ORPHA404 Hyperaldosteronism, familial, type II germline 3 184358062 CTGGCATCCCTGAGATGAAGACCATCTTGCGGGGAGTGGTGCTGAAAGAATACCTCACACT 397515521 76495 NM_000207.2(INS):c.3G>A (p.Met1Ile) INS Jul 05, 2011 MedGen:C1833104,OMIM:606176,Orphanet:ORPHA99885 Permanent neonatal diabetes mellitus not provided 11 2160969 CTGTCTCCCAGATCACTGTCCTTCTGCCATGGCCCTGTGGATGCGCCTCCTGCCCCTGCTG 397516835 151761 NM_003000.2(SDHB):c.575G>A (p.Cys192Tyr) SDHB Dec 05, 2015 MedGen:C1708353,Orphanet:ORPHA29072;MedGen:C0027672,SNOMED CT:699346009 Hereditary Paraganglioma-Pheochromocytoma Syndromes;Hereditary cancer-predisposing syndrome germline 1 17024040 GGCTCTACGAGTGCATTCTCTGTGCCTGCTGTAGCACCAGCTGCCCCAGCTACTGGTGGAA 113994111 32455 NM_001845.5(COL4A1):c.3389G>A (p.Gly1130Asp) COL4A1 Mar 08, 2011 MedGen:CN032791,OMIM:175780 Porencephaly 1 germline 13 110174463 AAGGCCTCCCAGGATTGGATGGCATCCCTGGTGTCAAAGGAGAAGCAGGTAGAGGGCCCTC 1057518731 353955 NM_001098426.1(SMARCD2):c.1181+1G>A SMARCD2 May 25, 2017 MedGen:CN239554;MedGen:C0398593,OMIM:245480,SNOMED CT:234431006;MedGen:CN244006,OMIM:617475 Autosomal recessive severe congenital neutropenia;Specific granule deficiency;Specific granule deficiency 2 germline 17 63833908 AGACCCCATTGTCATCAACCATGTCATTAGGTAAATGCAAGGAGGGGGACAGGAAGGCTCT 200288072 370142 NM_000426.3(LAMA2):c.283+1G>A LAMA2 Mar 26, 2017 MedGen:CN117977;MedGen:CN517202 Laminin alpha 2-related dystrophy;not provided germline 6 129050089 TCTGCAATCAAAACAGCAGCAATCCAAACCGTATGTATTTTAGTGTGTAGGTGTGTGGCGC 199874059 16430 NM_017777.3(MKS1):c.1024+1G>A MKS1 Jun 01, 2007 MedGen:C3714506,OMIM:249000 Meckel syndrome type 1 germline 17 58210658 TCCACTTCTTTGTAGAATTGCCAACTGCTCGTAAGTAATATTCTTAAGTCTCTCCTTTTAT 587779552 107002 NM_000090.3(COL3A1):c.3032G>A (p.Gly1011Glu) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189005450 CTGGTCTGGCTGGTACAGCTGGTGAACCTGGAAGAGATGTGAGTAGCAGTTTTTATTCAAC 45517213 58898 NM_000548.4(TSC2):c.2108G>A (p.Trp703Ter) TSC2 Jul 01, 2014 MedGen:C1860707,OMIM:613254;MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000 Tuberous sclerosis 2;Tuberous sclerosis syndrome germline 16 2072251 GACGCCTCCTCTCCTCGCAGGAGTCTGACTGGAAGGTGCTGAAGCTGGTTCTGGGCAGGCT 104886165 35838 NM_000495.4(COL4A5):c.2219G>A (p.Gly740Glu) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108603036 CTGGAAGAATTGGTCTAGAAGGCCCTCCTGGGCCACCCGGCTTTCCAGGACCAAAGGTCTG 1057520299 380137 NM_018684.3(ZC4H2):c.53G>A (p.Arg18Lys) ZC4H2 Mar 02, 2017 MedGen:C0796200,OMIM:314580,Orphanet:ORPHA3454 Wieacker syndrome germline X 64976325 TGTGCAAATTGGAAAGCATTAAAGAGATCAGGTAAGTGGCACGTTGTCCCCCTCCCCGCCC 1131691162 421084 NM_000051.3(ATM):c.7032G>A (p.Trp2344Ter) ATM Dec 07, 2015 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 11 108327701 CACAGAATGTCTGAGGGTTTGTGGCAACTGGTTAGCAGAAACGTGCTTAGAAAATCCTGCG 774122562 205171 NM_002905.3(RDH5):c.285G>A (p.Trp95Ter) RDH5 Aug 28, 2017 Human Phenotype Ontology:HP:0030642,MedGen:C0311338,OMIM:136880,Orphanet:ORPHA227796,SNOMED CT:68222009;MedGen:CN517202 Pigmentary retinal dystrophy;not provided germline 12 55721469 TCCCCAGAGCGTCCAGCAGGCAGCCAAGTGGGTGGAGATGCACGTTAAGGAAGCAGGTAAG 886039442 259756 NM_003722.4(TP63):c.956G>A (p.Arg319His) TP63 Jun 12, 2017 MedGen:CN517202 not provided germline 3 189867906 ACAGCAGTTGTGTTGGAGGGATGAACCGCCGTCCAATTTTAATCATTGTTACTCTGGAAAC 587779065 95979 NM_000251.2(MSH2):c.1013G>A (p.Gly338Glu) MSH2 Sep 05, 2013 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Lynch syndrome germline 2 47416366 CCTTGCTGAATAAGTGTAAAACCCCTCAAGGACAAAGACTTGTTAACCAGTGGATTAAGCA 201968272 48508 NM_030653.3(DDX11):c.788G>A (p.Arg263Gln) DDX11 Feb 22, 2013 MedGen:C3150658,OMIM:613398,Orphanet:ORPHA280558 Warsaw breakage syndrome germline 12 31089147 AGGATGTTCGGCTGGTCTCCCTTGGCTCCCGGCAGGTAAACAGTAGCCAGTATTTCCACCA 78440224 68679 NM_000492.3(CFTR):c.579+5G>A CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline;unknown 7 117534370 CCAACAACCTGAACAAATTTGATGAAGTATGTACCTATTGATTTAATCTTTTAGGCACTAT -1 459290 NM_000118.3(ENG):c.1134G>A (p.Ala378=) ENG Mar 21, 2017 MedGen:C0039445,OMIM:187300,Orphanet:ORPHA774,SNOMED CT:21877004 Osler hemorrhagic telangiectasia syndrome germline 9 127824304 GACCCTGGTACTAAAGAAAGAGCTTGTTGCGGTAAGGGAACTCCTGCCCCTCTGGCTCAGG 121918676 27653 NM_001063.3(TF):c.830G>A (p.Gly277Asp) TF May 01, 1984 na Transferrin variant d1 germline 3 133756969 CTCATACCGTCGTGGCCCGAAGTATGGGCGGCAAGGAGGACTTGATCTGGGAGCTTCTCAA 587779591 107051 NM_000090.3(COL3A1):c.2087G>A (p.Gly696Asp) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188999349 CTGGATTGGCAGGGGCCCCAGGACTTAGAGGTGGAGCTGGTCCCCCTGGTCCCGAAGGAGG 111505097 107127 NM_000090.3(COL3A1):c.3545G>A (p.Gly1182Glu) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189008943 ACTCATTCTAGGGCTCCCCAGGCCACCCAGGGCAACCAGGCCCTCCTGGACCTCCTGGTGC 121909254 23094 NM_005055.4(RAPSN):c.133G>A (p.Val45Met) RAPSN Jul 01, 2007 MedGen:C4225367,OMIM:616326 Myasthenic syndrome, congenital, 11, associated with acetylcholine receptor deficiency germline 11 47448832 AAGAGCTCGGACCTCATGGGGCGCTTCCGCGTGCTGGGCTGCCTGGTCACAGCCCACTCGG 587783778 170049 NM_000252.2(MTM1):c.1337G>A (p.Trp446Ter) MTM1 Feb 08, 2013 MedGen:C0410203,OMIM:310400,Orphanet:ORPHA596,SNOMED CT:46804001 Severe X-linked myotubular myopathy germline X 150659740 CTATTTTTCTCCAGTTTATTGATTGTGTGTGGCAAATGTCAAAACAGGTAAGGAATATGAG -1 477936 NM_000267.3(NF1):c.663G>A (p.Trp221Ter) NF1 Nov 25, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 17 31181718 ACATGTGGTTCTTTATTTATAGGCATTTTGGAACTGGGTAGAAAATTATCCAGATGAATTT 397508838 68801 NM_007294.3(BRCA1):c.1115G>A (p.Trp372Ter) BRCA1 Sep 08, 2016 MedGen:C2676676,OMIM:604370;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 1;Hereditary cancer-predisposing syndrome germline 17 43094416 AGAATCCTAGAGATACTGAAGATGTTCCTTGGATAACACTAAATAGCAGCATTCAGAAAGT -1 474197 NM_005732.3(RAD50):c.1736G>A (p.Trp579Ter) RAD50 Jun 15, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 5 132591977 ATTTTCCCAACAAAAAACAGCTTGAAGACTGGCTACATAGTAAATCAAAAGAAATTAATCA 587783779 170051 NM_000252.2(MTM1):c.1353+1G>A MTM1 Feb 08, 2013 MedGen:C0410203,OMIM:310400,Orphanet:ORPHA596,SNOMED CT:46804001 Severe X-linked myotubular myopathy germline X 150659757 ATTGATTGTGTGTGGCAAATGTCAAAACAGGTAAGGAATATGAGGGATGAAAATACATTCA 587776578 18610 NM_016169.3(SUFU):c.1022+1G>A SUFU May 11, 2017 MedGen:C0004779,OMIM:109400,Orphanet:ORPHA377,SNOMED CT:69408002;MedGen:C0751291,Orphanet:ORPHA251863;MedGen:CN517202 Gorlin syndrome;Medulloblastoma, desmoplastic;not provided germline;somatic 10 102599545 GCAGAATGGCCTCGCCCACGACCGGGCCCCGTAAGTTCCCCAGTGTCCCTGGGCTGGAACA 397514421 36421 NM_000060.4(BTD):c.1388G>A (p.Cys463Tyr) BTD Dec 04, 2012 MedGen:C0220754,OMIM:253260,Orphanet:ORPHA79241,SNOMED CT:8808004 Biotinidase deficiency not provided 3 15645244 ACTACATCCAAGTGTGTGCCCTGGTCAGGTGTGGGGGTCTTGGCTTCGACACCTGTGGACA 1085307306 414251 NM_001204.6(BMPR2):c.1156G>A (p.Glu386Lys) BMPR2 - MedGen:C0152171,OMIM:178600,SNOMED CT:26174007 Primary pulmonary hypertension germline 2 202532612 CAGGTTGGCACTATCAGATATATGGCACCAGAAGTGCTAGAAGGAGCTGTGAACTTGAGGG 193919335 19027 NM_017739.3(POMGNT1):c.1649G>A (p.Ser550Asn) POMGNT1 Jun 25, 2014 na;MedGen:C0457133,OMIM:253280,Orphanet:ORPHA588,SNOMED CT:277950001 Congenital muscular dystrophy-dystroglycanopathy with brain and eye anomalies, type A3;Muscle eye brain disease germline;unknown 1 46190473 CTTATGAAGTGGAAGTTCACAGGCTGCTCAGGTATGGCCTAGGACAATTGGGGTGTAGCAG 397514369 36357 NM_000060.4(BTD):c.557G>A (p.Cys186Tyr) BTD Jul 17, 2017 MedGen:C0220754,OMIM:253260,Orphanet:ORPHA79241,SNOMED CT:8808004 Biotinidase deficiency germline 3 15644413 AGGAGCCTTGTCATAGCAGTGACCCAAGGTGCCCAAAAGATGGGAGATACCAGTTCAACAC 756204866 439563 NM_014285.6(EXOSC2):c.593G>A (p.Gly198Asp) EXOSC2 Nov 10, 2017 MedGen:CN603946,OMIM:617763 SHORT STATURE, HEARING LOSS, RETINITIS PIGMENTOSA, AND DISTINCTIVE FACIES germline 9 130702231 ATTTGCCATGTGGTGCCTCAGTGATTCTCGGTAACAACGGCTTCATCTGGATTTACCCAAC 398123220 98472 NM_000169.2(GLA):c.734G>A (p.Trp245Ter) GLA Jul 31, 2015 Human Phenotype Ontology:HP:0001071,MedGen:C0002986,OMIM:301500,Orphanet:ORPHA324,SNOMED CT:16652001 Fabry disease germline X 101398852 CCTGGAAAAGTATAAAGAGTATCTTGGACTGGACATCTTTTAACCAGGAGAGAATTGTTGA 121913670 28922 NM_001127500.2(MET):c.3712G>A (p.Val1238Ile) MET Aug 16, 2016 MedGen:C0027672,SNOMED CT:699346009;Human Phenotype Ontology:HP:0005584,MeSH:D002292,MedGen:C0007134,OMIM:605074,Orphanet:ORPHA217071,SNOMED CT:41607009 Hereditary cancer-predisposing syndrome;Renal cell carcinoma, papillary, 1 germline 7 116783329 TGTAGGCTGGATGAAAAATTCACAGTCAAGGTTGCTGATTTTGGTCTTGCCAGAGACATGT 62514907 15633 NM_000277.2(PAH):c.442-1G>A PAH Mar 28, 2017 MedGen:C0031485,OMIM:261600,Orphanet:ORPHA716,SNOMED CT:154735006;MedGen:CN517202 Phenylketonuria;not provided germline 12 102866664 CTTGAAAAATCAGGTGTCTCTTTTCTCCTAGGGTTTTAAAGATCCTGTGTACCGTGCAAGA 869025187 76424 m.14279G>A MT-ND6 Sep 19, 2013 Human Phenotype Ontology:HP:0001112,MedGen:C0917796,OMIM:535000,Orphanet:ORPHA104,SNOMED CT:58610003 Leber's optic atrophy not provided MT 14279 GCACCAATAGGATCCTCCCGAATCAACCCTGACCCCTCTCCTTCATAAATTATTCAGCTTC -1 471580 NM_002872.4(RAC2):c.184G>A (p.Glu62Lys) RAC2 Jul 07, 2016 MedGen:C1842398,OMIM:608203,Orphanet:ORPHA183707 Neutrophil immunodeficiency syndrome germline 22 37232842 AACCTGGGGCTGTGGGACACTGCTGGGCAGGAGGACTACGACCGTCTCCGGCCGCTCTCCT 863224527 212931 NM_130799.2(MEN1):c.1664G>A (p.Ser555Asn) MEN1 Jan 05, 2017 MedGen:C0027672,SNOMED CT:699346009;MeSH:D018761,MedGen:C0025267,OMIM:131100,Orphanet:ORPHA652,SNOMED CT:30664006;MedGen:CN169374 Hereditary cancer-predisposing syndrome;Multiple endocrine neoplasia, type 1;not specified germline 11 64804503 CGCCGGAGGGTCCAGTGCTCACTTTCCAGAGTGAGAAGATGAAGGGCATGAAGGAGCTGCT 121965030 26962 NM_000203.4(IDUA):c.898G>A (p.Ala300Thr) IDUA Jan 01, 1996 MedGen:C4016443 IDUA pseudodeficiency germline 4 1002087 TTCGCGGACACCCCCATTTACAACGACGAGGCGGACCCGCTGGTGGGCTGGTCCCTGCCAC 121918188 15907 NM_000507.3(FBP1):c.490G>A (p.Gly164Ser) FBP1 Mar 27, 2017 MedGen:C0016756,OMIM:229700,Orphanet:ORPHA348,SNOMED CT:28183005 Fructose-biphosphatase deficiency germline 9 94609998 CTGCAACCAGGCCGGAACCTGGTGGCAGCCGGCTACGCACTGTATGGCAGTGCCACCATGC 1114167408 414026 NM_000088.3(COL1A1):c.563G>A (p.Gly188Asp) COL1A1 - MedGen:C0023931,OMIM:166200,SNOMED CT:385482004 Osteogenesis imperfecta type I unknown 17 50198186 TCCCTCTATAGGGTCCCTCTGGTCCTCGTGGTCTCCCTGGCCCCCCTGGTGCACCTGTGAG 121918715 27543 NM_001024847.2(TGFBR2):c.1599G>A (p.Gln533=) TGFBR2 Aug 01, 2017 MedGen:C2674876,OMIM:610168 Loeys-Dietz syndrome 2 germline 3 30688511 AGAAATTCCCAGCTTCTGGCTCAACCACCAGGTAAGGAGTGAGTGTTTACAAAGGTCAGTA 369035155 131944 NM_015474.3(SAMHD1):c.428G>A (p.Arg143His) SAMHD1 Mar 13, 2014 MedGen:C2749659,OMIM:612952 Aicardi Goutieres syndrome 5 germline 20 36935110 TCCGAATCATTGATACACCTCAATTTCAACGTCTTCGATACATCAAACAGCTGGGAGGTGG 121912468 29782 NM_000213.4(ITGB4):c.3674G>A (p.Arg1225His) ITGB4 Dec 01, 2001 MedGen:C1856934,OMIM:226730,Orphanet:ORPHA79403 Epidermolysis bullosa junctionalis with pyloric atresia germline 17 75750992 CCCGCTCCCTAGTGCCCAGCGAGCCAGGGCGTCTGGCCTTCAATGTCGTCTCCTCCACGGT 200095793 236725 NM_003052.4(SLC34A1):c.1006+1G>A SLC34A1 Oct 06, 2016 OMIM:616963;MedGen:CN517202 Hypercalcemia, infantile, 2;not provided germline 5 177393764 AGACCCTTGGAAATGCCACCATGGAGAAATGTAAGTGCCTGCAACATGGGAGGTGTCCTGC 869312907 226722 NM_001844.4(COL2A1):c.619G>A (p.Gly207Arg) COL2A1 Oct 01, 2015 MedGen:C4225273,OMIM:616583,Orphanet:ORPHA459051 Spondyloepiphyseal dysplasia, stanescu type de novo;germline 12 47995910 TCATTTTCTGTTCCGATGCAGGGCCCCATGGGACCTCGAGGACCTCCAGGCCCTGCAGGTG 730882146 181190 NM_006493.2(CLN5):c.935G>A (p.Ser312Asn) CLN5 Jan 01, 2015 MedGen:C1850442,OMIM:256731,Orphanet:ORPHA228360 Ceroid lipofuscinosis neuronal 5 germline 13 77000680 AAACCAACTATACAAGAATATTTCTTTACAGTGGAGAACCTACTTATCTGGGAAATGAAAC 80358027 46140 NM_007294.3(BRCA1):c.4357+1G>A BRCA1 Jul 31, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline;unknown 17 43082403 GAAATCCAGAACAAAGCACATCAGAAAAAGGTGTGTATTGTTGGCCAAACACTGATATCTT 398123049 76344 NM_016434.3(RTEL1):c.2233G>A (p.Val745Met) RTEL1 Aug 15, 2013 MedGen:C3554656,OMIM:615190 Dyskeratosis congenita, autosomal recessive, 5 germline 20 63690178 TATGACAACTTTGGCCATGTCATCCGAGACGTGGCCCAGTTCTTCCGTGTTGCCGAGCGAA 121908482 20822 NM_014270.4(SLC7A9):c.583G>A (p.Gly195Arg) SLC7A9 Jan 01, 2005 Human Phenotype Ontology:HP:0003131,MedGen:C0010691,OMIM:220100,Orphanet:ORPHA214,SNOMED CT:85020001 Cystinuria germline 19 32862482 CTGGTGATCGTGGCCATCATCATCATCAGCGGGCTGGTGCTCCTGGCCCAAGGTGACCCAC 1131691026 420663 NM_000546.5(TP53):c.438G>A (p.Trp146Ter) TP53 Sep 06, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 17 7675174 ACTGGCCAAGACCTGCCCTGTGCAGCTGTGGGTTGATTCCACACCCCCGCCCGGCACCCGC 756552975 366348 NM_001256850.1(TTN):c.71942G>A (p.Trp23981Ter) TTN Apr 30, 2015 MedGen:CN517202 not provided germline 2 178569267 AAATCACCAAAGACTCAGTATCAATTACATGGGAACCTCCTTTGTTGGATGGGGGATCCAA 104894231 27646 NM_005343.3(HRAS):c.436G>A (p.Ala146Thr) HRAS May 31, 2016 Human Phenotype Ontology:HP:0004808,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:ORPHA519,SNOMED CT:17788007;Human Phenotype Ontology:HP:0030078,MeSH:C538231,MedGen:C0152013;MedGen:C0278701;MeSH:D015179,MedGen:CN236642;MedGen:C0587248,OMIM:218040,Orphanet:ORPHA3071,SNOMED CT:309776008;Human Phenotype Ontology:HP:0006775,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:ORPHA29073,SNOMED CT:109989006,SNOMED CT:55921005;MeSH:D002583,MedGen:CN236667 Acute myeloid leukemia;Adenocarcinoma of lung;Adenocarcinoma of stomach;Colorectal Neoplasms;Costello syndrome;Multiple myeloma;Uterine cervical neoplasms germline;somatic 11 533467 AGCTACGGCATCCCCTACATCGAGACCTCGGCCAAGACCCGGCAGGTGAGGCAGCTCTCCA 116840821 33938 NM_000166.5(GJB1):c.556G>A (p.Glu186Lys) GJB1 Apr 15, 2010 MedGen:C0393808,OMIM:302800,Orphanet:ORPHA101075,SNOMED CT:230552007 X-linked hereditary motor and sensory neuropathy not provided X 71224263 ACAGTGGACTGCTTCGTGTCCCGCCCCACCGAGAAAACCGTCTTCACCGTCTTCATGCTAG 398123496 99258 NM_000709.3(BCKDHA):c.288+1G>A BCKDHA Oct 23, 2015 MedGen:C0024776,OMIM:248600,SNOMED CT:27718001;MedGen:CN517202 Maple syrup urine disease;not provided germline 19 41410817 CAGATCATCAACCCCAGCGAGGACCCCCACGTGAGAGGCGGCCTCCCCCACTTCCCGTGCC 886043875 272603 NM_003742.2(ABCB11):c.150+1G>A ABCB11 Jun 19, 2016 MedGen:C2608083,OMIM:605479,Orphanet:ORPHA99961 Benign recurrent intrahepatic cholestasis 2 germline 2 169014302 GATGGCGTTAGAGTTGGCTTCTTTCAATTGGTAATAAAACTGTGTTGATTTATGGCAGTGG 281865470 40356 NM_001193466.1(KANSL1):c.1652+1G>A KANSL1 Mar 09, 2017 Gene:791085,MedGen:C1864871,OMIM:610443;MedGen:CN517202 Koolen-de Vries syndrome;not provided germline 17 46067548 ACTCAGACCTGTCAATGGAGTTATTAACACGTAAGTTTTAGCTCTTCTACTTCCTACACTT 794726848 187883 NM_001165963.1(SCN1A):c.70G>A (p.Ala24Thr) SCN1A Dec 20, 2014 MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002 Severe myoclonic epilepsy in infancy de novo 2 166073552 TTCAACTTCTTCACCAGAGAATCTCTTGCGGCTATTGAAAGACGCATTGCAGAAGAAAAGG 1057517816 360575 NM_000330.3(RS1):c.668G>A (p.Cys223Tyr) RS1 Sep 17, 2015 MedGen:CN517202 not provided germline X 18642011 GGATGGAGCTGCTGGAGTGCGTCAGCAAGTGTGCCTGATGCCTGCCTCAGCTCGGCGCCTG 60627726 29672 NM_005555.3(KRT6B):c.1414G>A (p.Glu472Lys) KRT6B Jun 17, 2016 MedGen:C3714949,OMIM:615728;MedGen:CN517202 Pachyonychia congenita 4;not provided germline 12 52447788 ATCGCCACCTACCGCAAGCTGCTGGAGGGCGAGGAGTGCAGGTGGGTAACTGACGCGACTT 72656386 413951 NM_000089.3(COL1A2):c.794G>A (p.Gly265Asp) COL1A2 - MedGen:C0268363,OMIM:166220,Orphanet:ORPHA216820,SNOMED CT:205497004 Osteogenesis imperfecta with normal sclerae, dominant form unknown 7 94409323 TAATTCCTTGGTTTAATTTCCTCTTTTAGGGTGAAATTGGAGCTGTTGGTAACGCTGGTCC 794728826 196690 NM_001035.2(RYR2):c.11934G>A (p.Met3978Ile) RYR2 Nov 28, 2011 MedGen:CN517202 not provided germline 1 237781618 AAAAGAATTAATGGATCTGCAGAAGGATATGGTGGTCATGTTGCTGTCCATGTTAGAAGGT 886041328 265038 NM_004586.2(RPS6KA3):c.1934G>A (p.Trp645Ter) RPS6KA3 Mar 11, 2016 MedGen:CN517202 not provided germline X 20161669 GCGGAAAATTCTCACTCAGTGGTGGTTACTGGAATTCTGTTTCAGACACAGCAAAGGTAAG 104893889 22574 NM_004465.1(FGF10):c.413G>A (p.Gly138Glu) FGF10 Mar 01, 2007 MedGen:C0158667,OMIM:180920,Orphanet:ORPHA86815,SNOMED CT:22589009 Congenital absence of salivary gland germline 5 44310443 GCAACTATTACTTAGCCATGAACAAGAAGGGGAAACTCTATGGCTCAGTAAGTATTCTGCT 387907076 39927 NM_024027.4(COLEC11):c.610G>A (p.Gly204Ser) COLEC11 Mar 01, 2011 MedGen:C0796279,OMIM:265050 Carnevale syndrome germline 2 3643912 GCGCAAGCCGGCCTGGCCCGTGTCTTCATCGGCATCAACGACCTGGAGAAGGAGGGCGCCT 199473522 78177 NM_000238.3(KCNH2):c.1810G>A (p.Gly604Ser) KCNH2 Dec 30, 2016 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MeSH:D008133,MedGen:C0023976,SNOMED CT:9651007;MedGen:CN517202 Congenital long QT syndrome;Long QT syndrome;not provided germline 7 150951583 GGCAAACCCTACAACAGCAGCGGCCTGGGCGGCCCCTCCATCAAGGACAAGTATGTGACGG 121912980 31901 NM_000031.5(ALAD):c.397G>A (p.Gly133Arg) ALAD Jul 01, 1991 MedGen:C0268328,OMIM:612740,Orphanet:ORPHA95157,SNOMED CT:64081000 Porphobilinogen synthase deficiency germline 9 113390798 CTGTGTCCCTACACCTCCCATGGTCACTGCGGTGAGTTCCCTCCCTCCCACCAGCCCTGCT 374319146 181410 NM_033115.4(TBCK):c.1708+1G>A TBCK Jan 13, 2015 MedGen:CN228286;MedGen:CN228290;Human Phenotype Ontology:HP:0001263,MedGen:C4020875;MedGen:C4225161,OMIM:616900;Human Phenotype Ontology:HP:0001252,MedGen:C0026827;Human Phenotype Ontology:HP:0001250,MedGen:C0036572;MedGen:C3150353 Delayed reflexes;Dysmorphism;Global developmental delay;Hypotonia, infantile, with psychomotor retardation and characteristic facies 3;Muscular hypotonia;Seizures;Ventral septal defect germline 4 106194717 CCATCCCTTGGTTTCTTACCATGTTTACTCGTAAGTATGACTTCCCCCGGTTTTTTTGATA 104886434 35636 NM_000495.4(COL4A5):c.609+1G>A COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108575973 ATTGGTCCCCCAGGACCACCAGGTTTGATGGTAAGCTCTCTTCTTTAATTTAATTTCCCCC 122445101 26770 NM_000489.4(ATRX):c.6392G>A (p.Arg2131Gln) ATRX Jul 29, 2014 MedGen:C1845055,OMIM:301040,Orphanet:ORPHA847;MedGen:C0796003,OMIM:309580,Orphanet:ORPHA93972;MedGen:C4016452 ATR-X syndrome;Mental retardation-hypotonic facies syndrome X-linked, 1;Mental retardation-hypotonic facies syndrome, X-linked germline X 77558781 CTCTAGGAATTAATCTGGTAGCTGCTAATCGAGTAATTATATTCGACGCTTCTTGGAATCC 750663117 234071 NM_000051.3(ATM):c.3078-1G>A ATM Aug 03, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Ataxia-telangiectasia syndrome;Hereditary cancer-predisposing syndrome;not provided germline;unknown 11 108272531 ATTTAACTTTGGAAAACTTACTTGATTTCAGGCATCTAACAAAGGAGAGGAAATATATATT 1057518770 360966 NM_000462.3(UBE3A):c.2281G>A (p.Gly761Arg) UBE3A May 07, 2016 Human Phenotype Ontology:HP:0001273,MedGen:C1842581;Human Phenotype Ontology:HP:0002353,MedGen:C0151611;Human Phenotype Ontology:HP:0002474,MedGen:C1847610;Human Phenotype Ontology:HP:0001263,MedGen:C4020875;Human Phenotype Ontology:HP:0002465,MedGen:C1848207;Human Phenotype Ontology:HP:0001250,MedGen:C0036572 Abnormality of the corpus callosum;EEG abnormality;Expressive language delay;Global developmental delay;Poor speech;Seizures unknown 15 25354536 AGACCAGAAGAAATTGAATTGCTTATATGTGGAAGCCGGGTAAGAAAGCAGGTGTCTGCAA 397516347 52551 NM_000363.4(TNNI3):c.422G>A (p.Arg141Gln) TNNI3 Sep 15, 2017 Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Hypertrophic cardiomyopathy;Primary familial hypertrophic cardiomyopathy;not provided germline 19 55154157 AGATCTTTGACCTTCGAGGCAAGTTTAAGCGGCCCACCCTGCGGAGAGTGAGGATCTCTGC 863225082 188114 NM_006245.3(PPP2R5D):c.592G>A (p.Glu198Lys) PPP2R5D Nov 15, 2017 MedGen:C4225354,OMIM:616355,Orphanet:ORPHA457279;MedGen:CN517202 Mental retardation, autosomal dominant 35;not provided de novo;germline 6 43007265 AATCCCACAGGGGCTGAGTTTGACCCAGAGGAAGATGAGCCCACCCTGGAAGCTGCTTGGC 104895097 17588 NM_000243.2(MEFV):c.2282G>A (p.Arg761His) MEFV Sep 08, 2017 MedGen:C0031069,OMIM:249100,Orphanet:ORPHA342,SNOMED CT:12579009;MedGen:CN517202 Familial Mediterranean fever;not provided germline;unknown 16 3243205 CCCTTCAACCTATCTTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGAC 113994098 28541 NM_002693.2(POLG):c.2542G>A (p.Gly848Ser) POLG Oct 26, 2017 MedGen:C1834846,OMIM:157640;MedGen:C1850303,OMIM:258450,Orphanet:ORPHA254886;MedGen:C1850303,OMIM:258450,Orphanet:ORPHA254886;MedGen:C0872218,OMIM:603041,Orphanet:ORPHA298;MedGen:C3150914,OMIM:613662;MedGen:C3150914,OMIM:613662;MedGen:CN180166;MedGen:CN239393;MedGen:C1868097;MedGen:C0205710,OMIM:203700,Orphanet:ORPHA726,SNOMED CT:20415001;MedGen:C0205710,OMIM:203700,Orphanet:ORPHA726,SNOMED CT:20415001;MedGen:C1843851,OMIM:607459,Orphanet:ORPHA70595;MedGen:CN517202 Autosomal dominant progressive external ophthalmoplegia with mitochondrial DNA deletions 1;Cerebellar ataxia infantile with progressive external ophthalmoplegia;Cerebellar ataxia infantile with progressive external ophthalmoplegia;Mitochondrial DNA depletion syndrome 1 (MNGIE type);Mitochondrial DNA depletion syndrome 4B, MNGIE type;Mitochondrial DNA depletion syndrome 4B, MNGIE type;POLG-Related Disorders;POLG-Related Spectrum Disorders;Progressive external ophthalmoplegia with mitochondrial DNA deletions, digenic;Progressive sclerosing poliodystrophy;Progressive sclerosing poliodystrophy;Sensory ataxic neuropathy, dysarthria, and ophthalmoparesis;not provided germline;unknown 15 89321792 GGGGCCATCCTGCCCCAAGTGGTGACTGCCGGCACCATCACTCGCCGGGCTGTGGAGCCCA 587778857 132352 NM_000321.2(RB1):c.1695+1G>A RB1 Sep 16, 2013 Human Phenotype Ontology:HP:0009919,MeSH:D012175,MedGen:C0035335,OMIM:180200,Orphanet:ORPHA790 Retinoblastoma somatic 13 48381444 CGAATCATGGAATCCCTTGCATGGCTCTCAGTAAGTAGCTAAATAATTGAAGAAATTCATT 72559734 487507 NM_000352.4(ABCC8):c.221G>A (p.Arg74Gln) ABCC8 Jul 27, 2017 MedGen:C3888018,Orphanet:ORPHA276525 Familial hyperinsulinism germline 11 17474955 CATGGCTTCATTTCCCTGGGCACAACCTGCGGTGGATCCTGACCTTCATGCTGCTCTTCGT 199849117 441915 NM_000339.2(SLC12A3):c.2981G>A (p.Cys994Tyr) SLC12A3 May 23, 2017 MedGen:CN517202 not provided germline 16 56913293 GCACTTTGCCCATAGGGAGGAAGGGGAAGTGCCCCAGCTCGCTGTACATGGCCTGGCTGGA 104894891 25993 NM_000475.4(NR0B1):c.513G>A (p.Trp171Ter) NR0B1 Feb 01, 1996 MedGen:C0342482,OMIM:300200,SNOMED CT:237764004 Congenital adrenal hypoplasia, X-linked germline X 30308851 AGCGCCCGAGGCACGGCCAGGGGGCGCGTGGTGGGACCGCTCCTACTTCGCGCAGAGGCCA -1 426512 NM_025160.6(WDR26):c.850G>A (p.Asp284Asn) WDR26 Aug 15, 2017 MedGen:CN399088,OMIM:617616 SKRABAN-DEARDORFF SYNDROME germline 1 224419530 AAAGGGACAGCTTCCCGATCTAAACTATTGGATAAACTTCAGAGTAAGAGTCTTAATTTTT 886041333 265121 NM_000206.2(IL2RG):c.924+1G>A IL2RG Jul 11, 2017 MedGen:CN517202 not provided germline X 71108276 CTTGTTACTGAATACCACGGGAACTTTTCGGTGAGAACGCTGTCATAAGCATGCTGCAGTC 137854219 58524 NM_000548.4(TSC2):c.5219G>A (p.Trp1740Ter) TSC2 Apr 19, 2016 MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000;MedGen:CN517202 Tuberous sclerosis syndrome;not provided germline 16 2088285 CCAACCCCACCGATATCTACCCCTCCAAGTGGATTGCCCGGCTCCGCCACATCAAGCGGCT 113993975 34191 NM_002863.4(PYGL):c.698G>A (p.Gly233Asp) PYGL May 17, 2011 MedGen:C0017925,OMIM:232700,Orphanet:ORPHA369,SNOMED CT:237971004,SNOMED CT:29291001 Glycogen storage disease, type VI not provided 14 50921030 TGGCTCTGCCATATGACACCCCCGTGCCCGGCTACATGAATAACACTGTCAACACCATGCG 80338717 34369 NM_014251.2(SLC25A13):c.615+5G>A SLC25A13 Jan 05, 2012 MedGen:C1853942,OMIM:605814,Orphanet:ORPHA247598 Neonatal intrahepatic cholestasis caused by citrin deficiency not provided 7 96193032 CTTTTGTAGAAGAATGTCTAGTAGCTGTAAGTTGTAACTTGCCCTAATGAAGTGGTTTAAC 587780290 134019 NM_000070.2(CAPN3):c.2243G>A (p.Arg748Gln) CAPN3 May 18, 2017 MedGen:C1869123,OMIM:253600,Orphanet:ORPHA267;MedGen:CN517202 Limb-girdle muscular dystrophy, type 2A;not provided germline;unknown 15 42410646 AGTCCGGCACCATCAACAGCTACGAGATGCGAAATGCAGTCAACGACGCAGGTGCTGAGAA 398123039 75074 NM_002246.2(KCNK3):c.608G>A (p.Gly203Asp) KCNK3 Jul 11, 2016 MedGen:C0152171,OMIM:178600,SNOMED CT:26174007;MedGen:C3809198,OMIM:615344 Primary pulmonary hypertension;Primary pulmonary hypertension 4 germline 2 26727991 GCTTCATCACCCTCACCACCATCGGCTTCGGCGACTACGTGGCGCTGCAGAAGGACCAGGC 201599657 269760 NM_024596.4(MCPH1):c.2145G>A (p.Trp715Ter) MCPH1 May 01, 2017 MedGen:C1855081,OMIM:251200;MedGen:CN517202 Primary autosomal recessive microcephaly 1;not provided germline 8 6499860 CTGCTTGTTGTGTCACTTGCAGGTGCTATGGTCTTTAGAATTGGGTCACTGGATTTCTGAG 797045048 205786 NM_002204.3(ITGA3):c.2070+1G>A ITGA3 Nov 04, 2014 MedGen:C3553636,OMIM:614748,Orphanet:ORPHA306504 Interstitial lung disease, nephrotic syndrome, and epidermolysis bullosa, congenital paternal 17 50077122 CCCGCCCTGCTGCTGTCCTCAGTGCGCCCCGTGAGTGCCCGCCGGCCGGCTCAGAGCCCAA 72657702 427095 NM_001171.5(ABCC6):c.37-1G>A ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16221832 CATCCTAAGGGTCCTCTTTGTGTTCCCTCAGGTCTGGAACCAGACAGAGCCTGAACCTGCC 794728240 197669 NM_000138.4(FBN1):c.5801G>A (p.Cys1934Tyr) FBN1 Nov 06, 2013 MedGen:CN517202 not provided germline 15 48445492 TTGGGGATTTTTCTGCAGATGTTGATGAATGTGCAAGTGGAAATGGGAATCTTTGCAGAAA 267606636 16988 NM_030957.3(ADAMTS10):c.1553G>A (p.Gly518Asp) ADAMTS10 Nov 01, 2009 MedGen:C1869114,OMIM:277600 Weill-Marchesani syndrome 1 germline 19 8592797 GCATCACCAACAGCATCCCGGCCGCCGAGGGCACGCTGTGCCAGACGCACACCATCGACAA 797045050 205730 NM_004321.7(KIF1A):c.38G>A (p.Arg13His) KIF1A Dec 17, 2015 Human Phenotype Ontology:HP:0001258,MedGen:C1846589;MedGen:CN517202 Spastic paraplegia;not provided de novo;germline 2 240797715 GGGCTTCGGTGAAGGTGGCGGTGCGGGTCCGCCCCTTCAATTCCCGGGAAATGAGCCGTGA 368924997 206609 NM_024531.4(SLC52A2):c.1258G>A (p.Ala420Thr) SLC52A2 Aug 16, 2016 MedGen:C3553538,OMIM:614707;MedGen:CN517202 Brown-Vialetto-Van Laere syndrome 2;not provided germline 8 144360935 GTGGCCATCCAGGTGGGCTCTCTGCTCGGCGCTGTTGCTATGTTCCCCCCGACCAGCATCT 267608172 96804 NM_000535.6(PMS2):c.2174+1G>A PMS2 Oct 16, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0009405,Orphanet:ORPHA443090;MedGen:C1838333,OMIM:614337;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Hereditary nonpolyposis colon cancer;Hereditary nonpolyposis colorectal cancer type 4;Lynch syndrome;not provided germline;unknown 7 5982823 CACCGTGCTCCAGGGGCAGAGGCTCATAGCGTGAGTGTGTTTAGTGTTCATTCCCAGACTC 80358205 23765 NM_005267.4(GJA8):c.593G>A (p.Arg198Gln) GJA8 Mar 30, 2012 MedGen:C1861828,OMIM:116200 Cataract 1 de novo;germline 1 147908548 GCCCCAATGTGGTGGACTGCTTCGTGTCCCGGCCCACGGAGAAAACCATCTTCATCCTGTT 118203610 58025 NM_000368.4(TSC1):c.1997+1G>A TSC1 Jan 30, 2017 MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000;MedGen:CN517202 Tuberous sclerosis syndrome;not provided germline 9 132905580 AGCAGACGCGCACAGCAAGGAGCTGAACAAGTAAGGGACTGGGGCACTCTCTTCTGTGTTA 104886114 35747 NM_000495.4(COL4A5):c.1397G>A (p.Gly466Glu) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108591618 CAGGCCCCCCAGGATCTCCAGGTGATAAAGGACTCCAAGGAGAACAAGGAGTGAAAGGTTT 199469632 39480 NM_017415.2(KLHL3):c.1298G>A (p.Ser433Asn) KLHL3 Jan 22, 2012 MedGen:C3469605,OMIM:614495,Orphanet:ORPHA300525;Gene:7830,MedGen:C1449844,OMIM:145260,Orphanet:ORPHA757,SNOMED CT:15689008 Pseudohypoaldosteronism type 2D;Pseudohypoaldosteronism, type 2 germline 5 137637317 TTGTGGCCCCGATGAACACGCGGCGGAGCAGTGTGGGTGTGGGCGTTGTGGAGGGTAAGGA 760609867 361762 NM_007198.3(PLPBP):c.722G>A (p.Arg241Gln) PLPBP Jan 07, 2017 MedGen:C4310632,OMIM:617290 Epilepsy, early-onset, vitamin b6-dependent germline 8 37777998 CACAGGTTGAAGTAGGATCTACAAATGTCCGAATAGGAAGCACGATTTTTGGAGAGCGGGA 72554341 103039 NM_000531.5(OTC):c.269G>A (p.Ser90Asn) OTC - MedGen:CN517202 not provided unknown X 38369848 AGTCCTTAGGCATGATTTTTGAGAAAAGAAGTACTCGAACAAGATTGTCTACAGAAACAGG 104894115 18051 NM_133497.3(KCNV2):c.1376G>A (p.Gly459Asp) KCNV2 Sep 01, 2006 MedGen:C1835897,OMIM:610356,Orphanet:ORPHA209932 Retinal cone dystrophy 3B germline 9 2729465 TTCCTCTACAGGTGAGCATCTCCACCGTGGGCTACGGAGACATGTACCCAGAGACCCACCT 762659685 203358 NM_000833.4(GRIN2A):c.2146G>A (p.Ala716Thr) GRIN2A Mar 16, 2016 MedGen:C1832814,OMIM:245570;MedGen:CN517202 Epilepsy, focal, with speech disorder and with or without mental retardation;not provided germline 16 9822286 ACCAAATTTAATCAGAAAGGAGTAGAGGACGCCTTGGTCAGCCTGAAAACGGGGTAAGGAT 747171013 227499 NM_004273.4(CHST3):c.1063G>A (p.Gly355Arg) CHST3 May 03, 2016 MedGen:C1840471,OMIM:143095 Spondyloepiphyseal dysplasia with congenital joint dislocations germline 10 72008094 TGCGAGAGCATCCGCCTGTCCGCGGAGCTGGGGCTGCGGCAGCCCGCCTGGCTGCGGGGCC 104894505 27497 NM_001018005.1(TPM1):c.160G>A (p.Glu54Lys) TPM1 Oct 06, 2016 MedGen:C2678476,OMIM:611878;MedGen:CN517202 Dilated cardiomyopathy 1Y;not provided germline 15 63044072 GTGTCACTGCAAAAGAAACTCAAGGGCACCGAAGATGAACTGGACAAATACTCTGAGGCTC 368743618 178369 NM_006000.2(TUBA4A):c.1147G>A (p.Ala383Thr) TUBA4A Oct 22, 2014 MedGen:C4015512,OMIM:616208 Amyotrophic lateral sclerosis 22 with or without frontotemporal dementia germline 2 219250552 CGTGCCGTGTGCATGCTGAGCAACACGACCGCCATCGCCGAGGCCTGGGCCCGCCTGGACC 199473218 78728 NM_198056.2(SCN5A):c.3883G>A (p.Glu1295Lys) SCN5A Jul 29, 2013 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MedGen:CN517202 Congenital long QT syndrome;not provided germline 3 38562495 AGCCTGGTGGCCAACACCCTGGGCTTTGCCGAGATGGGCCCCATCAAGTCACTGCGGACGC 587783013 166163 NM_017651.4(AHI1):c.2174G>A (p.Trp725Ter) AHI1 Feb 23, 2015 MedGen:C1837713,OMIM:608629 Joubert syndrome 3 unknown 6 135433119 CAGGATGCTATGATTCCATGATACGGATATGGAAAGTTGAGATGAGAGAAGATTCTGCCAT 80358216 27223 NM_001166120.1(HSD3B2):c.512G>A (p.Trp171Ter) HSD3B2 Jul 01, 1992 MedGen:C0342471,OMIM:201810,SNOMED CT:54470008 3 beta-Hydroxysteroid dehydrogenase deficiency germline 1 119422013 CTGAGAAGGCTGTGCTGGCGGCTAATGGGTGGAATCTAAAAAATGGTGATACCTTGTACAC 104886349 35589 NM_000495.4(COL4A5):c.231+1G>A COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108559154 GAAGGGCCTCCGGGGCCTCGGGGACAAAAGGTATGTATCATGTTGCCAACCAGTAATGCCA 80358004 102845 NM_007294.3(BRCA1):c.5193+1G>A BRCA1 Oct 02, 2015 MedGen:C2676676,OMIM:604370 Breast-ovarian cancer, familial 1 germline 17 43063332 TCTATTAAAGAAAGAAAAATGCTGAATGAGGTAAGTACTTGATGTTACAAACTAACCAGAG 398122820 40563 NM_004048.2(B2M):c.286G>A (p.Asp96Asn) B2M Oct 10, 2012 MedGen:C0268389,OMIM:105200,Orphanet:ORPHA85450,SNOMED CT:66451004 Familial visceral amyloidosis, Ostertag type germline 15 44715641 TACTACACTGAATTCACCCCCACTGAAAAAGATGAGTATGCCTGCCGTGTGAACCATGTGA 202037016 48131 NM_000359.2(TGM1):c.1075G>A (p.Val359Met) TGM1 Jan 18, 2013 MedGen:C3536797,OMIM:242300 Autosomal recessive congenital ichthyosis 1 germline 14 24259159 GGCACCAACCCATCAGCGTGGGTGGGCAGCGTGGAGATCCTGCTTAGCTACCTACGCACGG 201948406 259804 NM_001182.4(ALDH7A1):c.834G>A (p.Val278=) ALDH7A1 Sep 25, 2017 MedGen:C1849508,OMIM:266100;MedGen:CN517202 Pyridoxine-dependent epilepsy;not provided germline 5 126568296 CCTGCTGTCCTTCACTGGGAGCACTCAGGTGGGAAAACAGGTGGGCCTGATGGTGCAGGAG 397509419 75099 NM_152393.3(KLHL40):c.1582G>A (p.Glu528Lys) KLHL40 Jul 11, 2013 MedGen:C3809209,OMIM:615348 Nemaline myopathy 8 germline 3 42689029 GTCACCGACACAGGGCTGACCAGTTCTGCCGAAGTGTACAGCATCACAGACAACAAGTATG 121964980 27029 NM_000170.2(GLDC):c.2216G>A (p.Arg739His) GLDC Apr 12, 2005 Human Phenotype Ontology:HP:0008288,MedGen:C0751748,OMIM:605899,Orphanet:ORPHA407,SNOMED CT:237939006 Non-ketotic hyperglycinemia germline 9 6554768 CCTTGCCTTTGTGGTAGGTGGGAATCTGTCGCCCTGGAGACTTCGGGTCTGATGTCTCGCA 587779549 106999 NM_000090.3(COL3A1):c.2150G>A (p.Gly717Asp) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188999498 AGGGTGCTGCTGGTCCTCCTGGGCCACCTGGTGCTGCTGGTACTCCTGGTCTGCAAGGAAT 121913666 28937 NM_005378.5(MYCN):c.1145G>A (p.Arg382His) MYCN Sep 01, 2008 MedGen:C0796068,OMIM:164280 Feingold syndrome 1 germline 2 15945847 CCCGAAACTCTGACTCGGAGGACAGTGAGCGTCGCAGAAACCACAACATCCTGGAGCGCCA 185551386 367924 NM_003060.3(SLC22A5):c.680G>A (p.Arg227His) SLC22A5 Mar 27, 2017 MedGen:C0342788,OMIM:212140,Orphanet:ORPHA158,SNOMED CT:21764004;MedGen:CN517202 Renal carnitine transport defect;not provided germline 5 132385355 CAGGGACAGAAATTCTTGGCAAGTCAGTTCGTATAATATTCTCTACGTTAGGAGTGTGCAT 875989894 228125 NM_000527.4(LDLR):c.266G>A (p.Cys89Tyr) LDLR May 26, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11102739 TCAACCGCTGCATTCCTCAGTTCTGGAGGTGCGATGGCCAAGTGGACTGCGACAACGGCTC 869312845 226619 NM_177559.2(CSNK2A1):c.140G>A (p.Arg47Gln) CSNK2A1 Aug 05, 2016 MedGen:C4310739,OMIM:617062 Okur-chung neurodevelopmental syndrome germline 20 505191 ATGACTACCAGCTGGTTCGAAAATTAGGCCGAGGTAAATACAGTGAAGTATTTGAAGCCAT 121912870 32400 NM_001844.4(COL2A1):c.3589G>A (p.Gly1197Ser) COL2A1 Feb 16, 2017 Human Phenotype Ontology:HP:0002655,MedGen:C0038015,OMIM:183900,Orphanet:ORPHA253;MedGen:CN517202 Spondyloepiphyseal dysplasia congenita;not provided germline 12 47975971 CCTGGTCCCCGTGGACGATCAGGCGAAACCGGCCCTGCTGTAAGTGTCCTGACTCCTTCCC 1064797040 406809 NM_000426.3(LAMA2):c.5866-1G>A LAMA2 Mar 23, 2017 MedGen:CN517202 not provided germline 6 129427751 AGATGTATGACATTTGTTTTTCTGTCCACAGGCAACAGGTCCTCGGGGTTTATTAAAGGAA 72653780 426980 NM_001171.5(ABCC6):c.1987G>A (p.Gly663Ser) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16182887 GTGCCCCAGGGCTGTCTGCTGGCTGTTGTCGGTCCAGTGGGGGCAGGGAAGTCCTCCCTGC 587782103 151623 NM_000051.3(ATM):c.3077G>A (p.Trp1026Ter) ATM Jun 18, 2015 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 11 108271406 GACAGTTTCTTACAGTAATTGGAGCATTTTGGTAGGTACAGTCTATTTTGTGGTCCTATTT 587784009 168299 NM_133433.3(NIPBL):c.64+1G>A NIPBL Dec 27, 2016 MedGen:CN029798,OMIM:122470 Cornelia de Lange syndrome 1 germline;unknown 5 36953761 CTCTTGCGGGGATTGCTAGTCTCACAGACCGTAAGTTTGGTTAATTTATCTAATTTAAGTT 137853058 22085 NM_004562.2(PRKN):c.635G>A (p.Cys212Tyr) PRKN Apr 11, 2017 MedGen:C1868675,OMIM:600116 Parkinson disease 2 germline 6 161973401 TATCTTTCTTTCAGGAATTTTTCTTTAAATGTGGAGCACACCCCACCTCTGACAAGGAAAC 879253813 214549 NM_000532.4(PCCB):c.183+5G>A PCCB - Human Phenotype Ontology:HP:0003353,MedGen:C0268579,OMIM:606054,Orphanet:ORPHA35 Propionic acidemia germline 3 136250563 GCCGTATTGACGCGCAGCACAAGCGAGTGAGTCCTGAGGGGCCTAAGTGAGTCCCGCCCCT 193922641 45055 NM_002185.4(IL7R):c.353G>A (p.Cys118Tyr) IL7R Aug 18, 2011 Human Phenotype Ontology:HP:0004430,MeSH:D016511,MedGen:C0085110,Orphanet:ORPHA183660,SNOMED CT:31323000 Severe combined immunodeficiency disease germline 5 35867437 GTGTGAAGGTTGGAGAAAAGAGTCTAACCTGCAAAAAAATAGACCTAACCACTATAGGTAA 193922400 44276 NM_000352.4(ABCC8):c.3545G>A (p.Arg1182Gln) ABCC8 Oct 30, 2014 MedGen:C0158981,Orphanet:ORPHA224,SNOMED CT:49817004;MedGen:C1835887,OMIM:610374 Neonatal diabetes mellitus;Transient neonatal diabetes mellitus 2 germline 11 17404524 TCGTGTGCTACTTCATCCAGAAGTACTTCCGGGTGGCGTCCAGGTGATGGCCTCAGGGGTG 398124094 100741 NM_004006.2(DMD):c.9361+1G>A DMD Oct 21, 2013 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009;MedGen:C3668940,OMIM:302045;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Becker muscular dystrophy;Dilated cardiomyopathy 3B;Duchenne muscular dystrophy germline X 31223046 AACTCCGAAGACTGCAGAAGGCCCTTTGCTGTAAGTATTGGCCAGTATTTGAAGATCTTGA 398124226 101288 NM_006363.5(SEC23B):c.689+1G>A SEC23B Sep 05, 2012 MedGen:CN517202 not provided germline 20 18525021 ACCACAGGAGCACCCTTTTGCTTCAAGCAGGTGAGAGCCCAACATGGAGTGTTACACGTAT 121908164 19701 NM_015074.3(KIF1B):c.4442G>A (p.Ser1481Asn) KIF1B Oct 01, 2008 MedGen:C2749485;Human Phenotype Ontology:HP:0002666,MedGen:C0031511,OMIM:171300 Neuroblastoma 1;Pheochromocytoma germline 1 10365476 GACTTGGTGACAGCATCCCCAAATCCCTGAGCGACTCGTTATCCCCCAGCCTCAGCAGTGG 74821926 33224 NM_000477.5(ALB):c.71G>A (p.Arg24Gln) ALB Jan 01, 1990 MedGen:CN220290;MedGen:C0268345,OMIM:130060,SNOMED CT:55711009 Alloalbuminemia;Ehlers-Danlos syndrome, procollagen proteinase deficient germline 4 73404398 GCTCGGCTTATTCCAGGGGTGTGTTTCGTCGAGATGCACGTAAGAAATCCATTTTTCTATT 587778859 132304 NM_000321.2(RB1):c.2101G>A (p.Asp701Asn) RB1 Sep 16, 2013 Human Phenotype Ontology:HP:0009919,MeSH:D012175,MedGen:C0035335,OMIM:180200,Orphanet:ORPHA790 Retinoblastoma somatic 13 48459828 GAGTATGAACTCATGAGAGACAGGCATTTGGACCAAGTAAGAAAATCAAGCACTTCACCTT 727504305 174736 NM_000256.3(MYBPC3):c.3331-1G>A MYBPC3 Aug 29, 2013 MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005 Primary familial hypertrophic cardiomyopathy germline 11 47332974 AGAGATGCCTCCCCTCCCTCCCTGCCCCCAGGAGTGGTTCACCGTCTTGGAGCATTACCGC 387907277 45758 NM_005270.4(GLI2):c.1885G>A (p.Glu629Lys) GLI2 Jan 01, 2012 MedGen:C1835819,OMIM:610829 Holoprosencephaly 9 germline 2 120984672 GGCACGGAGCCTGGCGGCCCAGAGAGCACCGAGGCCAGCAGCACCAGCCAGGCCGTGGAGG 387906369 22216 NM_000492.3(CFTR):c.3718-1G>A CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline 7 117642437 CAGAAGTGATCCCATCACTTTTACCTTATAGGTGGGCCTCTTGGGAAGAACTGGATCAGGG -1 485824 NM_004006.2(DMD):c.7310-1G>A DMD Apr 11, 2014 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Becker muscular dystrophy;Duchenne muscular dystrophy germline X 31774193 TTCCTTTTTGCAAAAACCCAAAATATTTTAGCTCCTACTCAGACTGTTACTCTGGTGACAC 121908883 21496 NM_000369.2(TSHR):c.1291G>A (p.Gly431Ser) TSHR Sep 01, 2001 MedGen:C1836706,OMIM:609152,Orphanet:ORPHA424 Hyperthyroidism, nonautoimmune germline 14 81143349 GTGTGGTTCGTTAGTCTGCTGGCTCTCCTGGGCAATGTCTTTGTCCTGCTTATTCTCCTCA 587779914 133015 NM_000179.2(MSH6):c.1241G>A (p.Trp414Ter) MSH6 Jun 03, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0009405,Orphanet:ORPHA443090;MedGen:CN517202;MedGen:CN169374 Hereditary cancer-predisposing syndrome;Hereditary nonpolyposis colon cancer;not provided;not specified germline 2 47799224 ATTCTTGTACTCCTGGGATGAGGAAGTGGTGGCAGATTAAGTCTCAGAACTTTGATCTTGT 72653750 426823 NM_001171.5(ABCC6):c.3971G>A (p.Trp1324Ter) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16154943 GGCTCCAGGAGGCAGCTGAGGGTGGGATCTGGATCGACGGGGTCCCCATTGCCCACGTGGG 80356857 69798 NM_007294.3(BRCA1):c.4185G>A (p.Gln1395=) BRCA1 Feb 19, 2016 MedGen:C2676676,OMIM:604370;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 1;Hereditary cancer-predisposing syndrome germline 17 43090944 ATCCTCTCAGAGTGACATTTTAACCACTCAGGTAAAAAGCGTGTGTGTGTGTGCACATGCG 1131690818 420603 NM_004360.4(CDH1):c.1711+5G>A CDH1 Sep 28, 2014 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 16 68819430 AGCCCTAATCATAGCTACAGACAATGGTAAGGGGGCCTCATCTGAGCCTTTGCTGCCTCGA 137853204 33305 NM_000476.2(AK1):c.118G>A (p.Gly40Arg) AK1 Jul 01, 2003 MedGen:C2675459,OMIM:612631,Orphanet:ORPHA86817 Adenylate kinase deficiency, hemolytic anemia due to germline 9 127872779 CAGAAGTATGGCTACACCCACCTCTCCACCGGGGACCTCCTGCGGTCCGAGGTCAGCTCAG 137853341 23925 NM_000193.3(SHH):c.1147G>A (p.Ala383Thr) SHH Aug 29, 2013 MedGen:C1840529,OMIM:142945 Holoprosencephaly 3 germline 7 155803142 GCGCACCGGGCCTTCGCGCCCTTCCGCCTGGCGCACGCGCTCCTGGCTGCACTGGCGCCCG -1 427235 NM_000038.5(APC):c.220+1G>A APC Feb 05, 2014 MedGen:CN240755 Familial adenomatous polyposis germline 5 112766411 GACAGATTGATTTATTAGAGCGTCTTAAAGGTAGATTTTAAAAAGGTGTTTTAAAATAATT 886043129 269765 NM_000833.4(GRIN2A):c.3813G>A (p.Trp1271Ter) GRIN2A Jan 27, 2016 MedGen:C1832814,OMIM:245570 Epilepsy, focal, with speech disorder and with or without mental retardation germline 16 9763731 CACCGGGGAGCAGGTCTACCAGCAGGACTGGGCACAGAACAATGCCCTTCAATTACAAAAG 137852520 25029 NM_000425.4(L1CAM):c.1354G>A (p.Gly452Arg) L1CAM Oct 16, 2017 MedGen:CN221283;MedGen:C0265216,OMIM:307000,Orphanet:ORPHA2182,SNOMED CT:71779008;MedGen:CN517202 Hydrocephalus due to aqueductal stenosis;X-linked hydrocephalus syndrome;not provided germline X 153868866 AGCACTGCCTACCTTCTGTGCAAGGCCTTCGGAGCGCCTGTGCCCAGTGTTCAGTGGTGAG 45517386 58630 NM_000548.4(TSC2):c.4989+1G>A TSC2 Nov 18, 2013 MedGen:C1860707,OMIM:613254;MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000 Tuberous sclerosis 2;Tuberous sclerosis syndrome germline 16 2086872 GGTGAGGACTTCAAGCTTGGCACCATCAAGGTGAGTGAGGGGCCGTCAGTGAGGCTGGGCC 387906944 39547 NM_021734.4(SLC25A19):c.373G>A (p.Gly125Ser) SLC25A19 Sep 01, 2009 MedGen:C3150973,OMIM:613710,Orphanet:ORPHA217396 Striatal necrosis, bilateral, and progressive polyneuropathy germline 17 75283509 GCCCGGGAATTCTCAGTGCACTTTGTATGTGGTGGCCTGGCTGCCTGTATGGCCACCCTCA 1131691096 467579 NM_000267.3(NF1):c.1721+1G>A NF1 Jun 27, 2017 MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003 Neurofibromatosis, type 1 germline 17 31221930 TGCTCCTGTAGAAACATTTTGGGAGATTAGGTATATGTACTTTTATTTTTTAAATTCAACT 267606683 206626 NM_033409.3(SLC52A3):c.211G>A (p.Glu71Lys) SLC52A3 Mar 17, 2015 MedGen:CN029849,OMIM:211530 Brown-Vialetto-Van Laere syndrome 1 germline 20 765564 CTCCATCACTTCCGGCCCAGCTGCCTTTCCGAAGTGCCCATCATCTTCACCCTGCTGGGCG 121912591 17470 NM_153006.2(NAGS):c.835G>A (p.Ala279Thr) NAGS Aug 01, 2007 MedGen:C0268543,OMIM:237310,Orphanet:ORPHA927,SNOMED CT:57119000 Hyperammonemia, type III germline 17 44006157 TCCGTGCTTCTCGACTCCCTGGAGGTGACCGCGTCGCTGGCCAAGGCGCTGCGGCCCACCA 869312900 226712 NM_138701.3(MPLKIP):c.339+1G>A MPLKIP Feb 01, 2016 MedGen:C1961117,OMIM:234050 Trichothiodystrophy, nonphotosensitive 1 germline 7 40134228 TCCCCAGGGCAGCAGCAGACCCACCCCCAGGTAATAATAATAGCCAGCGTTTGCCGAGCTC 121912424 29841 NM_001039933.2(CD79B):c.412G>A (p.Gly138Ser) CD79B Aug 15, 2007 MedGen:C3150207,OMIM:612692 Agammaglobulinemia 6, autosomal recessive germline 17 63930095 AACAACACCTCGGAGGTCTACCAGGGCTGCGGCACAGAGCTGCGAGTCATGGGTGTGTGCC 587779523 106968 NM_000090.3(COL3A1):c.1501G>A (p.Gly501Arg) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188995091 CGAGGACCTGCTGGACCAAATGGCATCCCAGGAGAAAAGGTAGATAACTTTAGTTTCTATG 762905361 247364 NM_005120.2(MED12):c.2444G>A (p.Arg815Gln) MED12 Aug 11, 2016 MedGen:C0220769,OMIM:305450,SNOMED CT:49984004 FG syndrome germline X 71126057 TCCCCTCAGGTGGGGAGGATGGGCAGAAGCGGCGACGCAACCGGCCTGAAGCCTTCCCCAC 1060501712 397848 NM_000051.3(ATM):c.6272G>A (p.Trp2091Ter) ATM Jul 27, 2016 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005 Ataxia-telangiectasia syndrome germline 11 108317446 TAAAAGGATTGGATTATGAAAATAAAGACTGGTGTCCTGAACTAGAAGAACTTCATTACCA 121912610 17029 NM_144966.5(FREM1):c.4318G>A (p.Gly1440Ser) FREM1 Sep 01, 2009 MedGen:C2750433,OMIM:608980,Orphanet:ORPHA217266;MedGen:CN517202 Bifid nose with or without anorectal and renal anomalies;not provided germline 9 14784494 CTCTATGTCATCACCTCCCCTCCGCGATATGGCCAGATCGAATATGTTCACTATCCTGGAG 10250779 15457 NM_000290.3(PGAM2):c.233G>A (p.Trp78Ter) PGAM2 Feb 15, 2017 MedGen:C0268149,OMIM:261670,Orphanet:ORPHA97234,SNOMED CT:37666005;MedGen:CN517202 Glycogen storage disease type X;not provided germline 7 44065297 GGGCCATCCTGGACGGCACGGACCAGATGTGGCTGCCTGTGGTGCGCACTTGGCGCCTCAA 104886251 36007 NM_000495.4(COL4A5):c.3659G>A (p.Gly1220Asp) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108668373 CTGGGATTCCAGGAAATCCTGGCCTTCCAGGTCCAAAGGGCGAACCAGGCTTTCACGGTTT 796051875 39834 NM_020223.3(FAM20C):c.796G>A (p.Gly266Arg) FAM20C Mar 01, 2009 MedGen:C1850106,OMIM:259775,Orphanet:ORPHA1832 Raine syndrome germline 7 208909 CTCTCCCTCCTTCCTGCAGCCATGAAGTCGGGGGGCACGCAGCTGAAGCTCATCATGACCT 116840822 33937 NM_000166.5(GJB1):c.536G>A (p.Cys179Tyr) GJB1 Jan 21, 2016 MedGen:C0393808,OMIM:302800,Orphanet:ORPHA101075,SNOMED CT:230552007;MedGen:CN517202 X-linked hereditary motor and sensory neuropathy;not provided germline X 71224243 ACGTCTACCCCTGCCCCAACACAGTGGACTGCTTCGTGTCCCGCCCCACCGAGAAAACCGT 1064793444 407161 NM_001101.4(ACTB):c.629G>A (p.Arg210His) ACTB Feb 22, 2017 MedGen:CN517202 not provided germline 7 5528454 TCACCACCACGGCCGAGCGGGAAATCGTGCGTGACATTAAGGAGAAGCTGTGCTACGTCGC 81002796 66828 NM_000059.3(BRCA2):c.67+1G>A BRCA2 Jan 18, 2016 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline 13 32316528 AAATTTTTAAGACACGCTGCAACAAAGCAGGTATTGACAAATTTTATATAACTTTATAAAT -1 433005 NM_001127510.2(APC):c.834+1G>A APC Oct 20, 2016 MedGen:CN169374 not specified germline 5 112801384 ATCAACATGGCAACTTCTGGTAATGGTCAGGTAAATAAATTATTTTATCATATTTTTTAAA 121912894 32435 NM_001844.4(COL2A1):c.952G>A (p.Gly318Arg) COL2A1 Feb 01, 2005 MedGen:C1836081,Orphanet:ORPHA209867 Rhegmatogenous retinal detachment, autosomal dominant germline 12 47993475 CAGGGTGAGAGTGGTTCCCCGGGTGAGAACGGATCTCCGGGCCCAATGGTAAGTATGGACA 121908581 21200 NM_152384.2(BBS5):c.214G>A (p.Gly72Ser) BBS5 Feb 15, 2008 MedGen:C3892039,OMIM:615983 Bardet-Biedl syndrome 5 germline 2 169487811 TACATTCTTTGCTTTTGGATTTTAGCTGTCGGTTACAATTGCATATTGAATATTACAACAA 121908716 16996 NM_000022.3(ADA):c.632G>A (p.Arg211His) ADA Jun 30, 2016 MedGen:C1863236,OMIM:102700,Orphanet:ORPHA277 Severe combined immunodeficiency due to ADA deficiency germline;unknown 20 44623053 TCCAGGAGGCTGTGAAGAGCGGCATTCACCGTACTGTCCACGCCGGGGAGGTGGGCTCGGC 121964966 15161 NM_000071.2(CBS):c.430G>A (p.Glu144Lys) CBS Apr 13, 2017 MedGen:C3150344,OMIM:236200;MedGen:CN068394 Homocystinuria due to CBS deficiency;Homocystinuria, pyridoxine-responsive germline;unknown 21 43066264 GGGACGCTGAAGCCCGGGGACACGATTATCGAGCCGACATCCGGGAACACCGGTGGGTGCC 66721653 414016 NM_000088.3(COL1A1):c.1057G>A (p.Gly353Ser) COL1A1 - MedGen:C0268363,OMIM:166220,Orphanet:ORPHA216820,SNOMED CT:205497004 Osteogenesis imperfecta with normal sclerae, dominant form paternal 17 50195665 GCTTCTGATATGTCCTTTCTTCTGATTCAGGGTGAAGCTGGTCCCCAAGGGCCCCGAGGCT 782269909 70550 NM_007259.4(VPS45):c.712G>A (p.Glu238Lys) VPS45 Jul 04, 2013 MedGen:C3809031,OMIM:615285,Orphanet:ORPHA369852 Severe congenital neutropenia 5, autosomal recessive germline 1 150081366 ATTTAGTGGACATATCAGGCCATGGTCCACGAACTACTAGGCATAAACAACAATCGGATTG 397507340 46478 NM_000059.3(BRCA2):c.476-1G>A BRCA2 Jul 22, 2009 MedGen:C2675520,OMIM:612555 Breast-ovarian cancer, familial 2 germline 13 32326241 CTTAACAATTTTCCCCTTTTTTTACCCCCAGTGGTATGTGGGAGTTTGTTTCATACACCAA 981049067 420735 NM_003001.3(SDHC):c.387G>A (p.Trp129Ter) SDHC Dec 02, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 1 161356822 ACTTGTCTTCCCTCTCATGTATCATACCTGGAATGGGATCCGACACTTGGTAAGTTAATTC 776679653 362182 NM_030940.3(ISCA1):c.259G>A (p.Glu87Lys) ISCA1 Aug 10, 2017 MedGen:CN388855,OMIM:617613;MedGen:CN234684 MULTIPLE MITOCHONDRIAL DYSFUNCTIONS SYNDROME 5;Multiple mitochondrial dysfunctions syndrome germline 9 86266174 TCTTTTCTCCAAGGAGTCAGAGTATTCATCGAAAAGAAAGCACAGCTAACACTTTTAGGAA 121909522 33331 NM_001100.3(ACTA1):c.493G>A (p.Val165Met) ACTA1 Dec 01, 2007 MedGen:C3711389,OMIM:161800,Orphanet:ORPHA98904 Nemaline myopathy 3 germline 1 229432393 CTGGACTCCGGCGACGGCGTCACCCACAACGTGCCCATTTATGAGGGCTACGCGCTGCCGC 104893648 28933 NM_005378.5(MYCN):c.1181G>A (p.Arg394His) MYCN May 01, 2005 MedGen:C0796068,OMIM:164280 Feingold syndrome 1 germline 2 15945883 GAAACCACAACATCCTGGAGCGCCAGCGCCGCAACGACCTTCGGTCCAGCTTTCTCACGCT 587777461 143132 NM_001128845.1(SMARCA4):c.4071+1G>A SMARCA4 May 01, 2014 MedGen:C2750074,OMIM:613325 Rhabdoid tumor predisposition syndrome 2 unknown 19 11035133 GACTCACTGACGGAGAAGCAGTGGCTCAAGGTACATGCTGGAGAGGCCCAGCAGCTGCCGC 398123040 75075 NM_002246.2(KCNK3):c.289G>A (p.Gly97Arg) KCNK3 Jul 25, 2013 MedGen:C3809198,OMIM:615344 Primary pulmonary hypertension 4 germline 2 26727672 TCTCCTCTTTCCCACTTTCCCCCAGGCTACGGGCACGCGGCACCCAGCACGGATGGCGGCA 121908606 21151 NM_004531.4(MOCS2):c.3G>A (p.Met1Ile) MOCS2 Mar 01, 1999 MedGen:C1854989,OMIM:252160,Orphanet:ORPHA308393 Molybdenum cofactor deficiency, complementation group B germline 5 53107172 CAGATAATATTTGCTGTTCGTCAAGAATATGTCGAGCTTGGAGATCAGCTCCTCGTGCTTC 80338831 29121 NM_002473.5(MYH9):c.4270G>A (p.Asp1424Asn) MYH9 Dec 29, 2016 MedGen:C0403445,OMIM:153640,SNOMED CT:236422008;MedGen:CN073381,Orphanet:ORPHA182050;MedGen:C1834478,OMIM:600208;MedGen:C0340978,OMIM:155100;MedGen:C1854520,OMIM:605249 Fechtner syndrome;MYH9 related disorders;Macrothrombocytopenia and progressive sensorineural deafness;May-Hegglin anomaly;Sebastian syndrome germline 22 36292060 ACCAAGACGCGGCTGCAGCAGGAGCTGGACGACCTGCTGGTGGACCTGGACCACCAGCGCC 121909566 33072 NM_000488.3(SERPINC1):c.1271G>A (p.Gly424Asp) SERPINC1 Nov 01, 1992 MedGen:C0272375,OMIM:613118,Orphanet:ORPHA82,SNOMED CT:36351005 Antithrombin III deficiency germline 1 173904013 CAGCTGCAAGTACCGCTGTTGTGATTGCTGGCCGTTCGCTAAACCCCAACAGGGTGACTTT 200652608 39459 NM_030928.3(CDT1):c.1402G>A (p.Glu468Lys) CDT1 Feb 27, 2011 MedGen:C3151120,OMIM:613804 Meier-Gorlin syndrome 4 germline 16 88807407 GCCCGCGTGCTGCGGAGCGTCTTTGTGTCCGAACGCAAGCCTGCGCTCAGCATGGAGGTGG 556880586 171723 NM_000492.3(CFTR):c.1117G>A (p.Asp373Asn) CFTR Oct 01, 2013 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis unknown 7 117542016 TAATATGTTTTTGCTCTCTTTTATAAATAGGATTTCTTACAAAAGCAAGAATATAAGACAT 28937318 24429 NM_198056.2(SCN5A):c.1100G>A (p.Arg367His) SCN5A Jun 28, 2017 MedGen:C1142166,Orphanet:ORPHA130,SNOMED CT:418818005;MedGen:CN029323,OMIM:601144 Brugada syndrome;Brugada syndrome 1 germline;unknown 3 38606709 CCTTTGCCTGGGCCTTTCTTGCACTCTTCCGCCTGATGACGCAGGACTGCTGGGAGCGCCT 786205072 19580 NM_032667.6(BSCL2):c.671+5G>A BSCL2 Dec 08, 2016 MedGen:C1720863,OMIM:269700 Congenital generalized lipodystrophy type 2 germline 11 62692371 ATCCACGCGCACTTCACTGGGCTCAGGTGAGGGGCCAACTGGAGTGAACCTTGGGCAACTC 397515439 50320 NM_032801.4(JAM3):c.346G>A (p.Glu116Lys) JAM3 Mar 01, 2013 MedGen:C3151000,OMIM:613730,Orphanet:ORPHA306547 Hemorrhagic destruction of the brain, subependymal calcification, and cataracts germline 11 134144330 ACACGGAGAGACTCAGCCCTTTATCGCTGTGAGGTCGTTGCTCGAAATGACCGCAAGGAAA 61752068 24935 NM_000330.3(RS1):c.305G>A (p.Arg102Gln) RS1 Nov 18, 2016 MedGen:C0271091,OMIM:312700,Orphanet:ORPHA792,SNOMED CT:86923008;MedGen:CN517202 Juvenile retinoschisis;not provided germline;unknown X 18647212 GGTATTCTTCGTGGACTGCAAACAAGGCCCGGCTCAACAGTCAAGGCTTTGGGTAAGCAGG 137852988 20007 NM_022437.2(ABCG8):c.1720G>A (p.Gly574Arg) ABCG8 Jun 14, 2016 MedGen:C0342907,OMIM:210250,Orphanet:ORPHA2882,SNOMED CT:238104009 Sitosterolemia germline 2 43875377 AATGCCCTCTACAACTCCTTCTACCTCGCCGGGGGCTTCATGATAAACTTGAGCAGCCTGT 886042943 269005 NM_001849.3(COL6A2):c.785G>A (p.Gly262Asp) COL6A2 Dec 27, 2015 MedGen:CN029274,OMIM:158810;MedGen:CN033863,OMIM:254090 Bethlem myopathy 1;Ullrich congenital muscular dystrophy 1 germline 21 46114057 TGGAAATCCCTGGGCCCTCTGGCCCCAAGGGCTACCGTGGACAGAAGGTAAGATGCCCAGA 886039653 260127 NM_016373.3(WWOX):c.410-1G>A WWOX Jun 21, 2016 MedGen:CN517202 not provided germline 16 78164182 TTTCTAACATTGACTTTCCTTTAAACCATAGGGTTCGAAACCGCCAAGTCTTTTGCCCTCC 397515608 76719 NM_194248.2(OTOF):c.5567G>A (p.Arg1856Gln) OTOF Apr 26, 2011 MedGen:C1832828,OMIM:601071 Deafness, autosomal recessive 9 not provided 2 26460997 CCATCGAGCTGGACCTGAACCGGTTCCCGCGGGGCGCAAAGACAGCCAAGCAGTGCACCAT 200196781 151161 NM_000051.3(ATM):c.3993+1G>A ATM Jul 20, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Ataxia-telangiectasia syndrome;Hereditary cancer-predisposing syndrome;not provided germline;unknown 11 108284474 CTTAAAAGTGAAAACTTATTGGGAAAACAGGTATGGCTTCAATTTTTATGTACTTTTCATT 876658483 236511 NM_000546.5(TP53):c.158G>A (p.Trp53Ter) TP53 Feb 03, 2015 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 17 7676211 TGATGCTGTCCCCGGACGATATTGAACAATGGTTCACTGAAGACCCAGGTCCAGATGAAGC 121909733 31163 NM_005271.4(GLUD1):c.1495G>A (p.Gly499Ser) GLUD1 May 07, 1998 MedGen:C1847555,OMIM:606762,Orphanet:ORPHA35878 Hyperinsulinism-hyperammonemia syndrome germline 10 87053404 TTGTTAAACTTGTGTTCTTTTCCCTAATAGGGTGCATCTGAGAAAGACATCGTGCACTCTG 72551313 19303 NM_000784.3(CYP27A1):c.434G>A (p.Gly145Glu) CYP27A1 Aug 01, 2013 MedGen:C0238052,OMIM:213700,Orphanet:ORPHA909,SNOMED CT:63246000 Cholestanol storage disease germline 2 218809755 AGCACCGGGACCAGCACGACCTGACCTATGGGCCGTTCACCACGTGAGCTGGGGCCTGAAG 879254536 245577 NM_000527.4(LDLR):c.464G>A (p.Cys155Tyr) LDLR Dec 16, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11105370 TGCTCACCTGTGGTCCCGCCAGCTTCCAGTGCAACAGCTCCACCTGCATCCCCCAGCTGTG 104886236 35978 NM_000495.4(COL4A5):c.3499G>A (p.Gly1167Ser) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108666540 CCTGGGCAACCAGGGCCTCCAGGCGAAAAAGGCAAACCCGGTCAAGATGGTATTCCTGGAC 398122955 94560 NM_024582.4(FAT4):c.7123G>A (p.Glu2375Lys) FAT4 Apr 26, 2017 MedGen:C4014939,OMIM:616006;MedGen:C3809875,OMIM:615546 Hennekam lymphangiectasia-lymphedema syndrome 2;Van Maldergem syndrome 2 not provided 4 125434349 GCCAGTAAAGCGTATTTCACAACAATTCCTGAGGATGCACCAACTGGAACAGATGTTTTAT 786203847 183017 NM_000314.6(PTEN):c.165-1G>A PTEN Dec 25, 2014 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline 10 87925512 GTGGCTTTTTGTTTGTTTGTTTTGTTTTAAGGTTTTTGGATTCAAAGCATAAAAACCATTA 752169833 215640 NM_001320327.1(CHCHD2):c.434G>A (p.Arg145Gln) CHCHD2 Jul 01, 2015 MedGen:C4225238,OMIM:616710 Parkinson disease 22, autosomal dominant germline 7 56102878 AGGGTTTCAATGAGGTGCTGAAACAGTGCCGACTTGCAAACGGTAGGTAATTTGTCCAATT 80356618 34049 NM_000525.3(KCNJ11):c.497G>A (p.Cys166Tyr) KCNJ11 Jul 05, 2011 MedGen:C1833104,OMIM:606176,Orphanet:ORPHA99885 Permanent neonatal diabetes mellitus not provided 11 17387595 GGCTCATGATCAACGCCATCATGCTTGGCTGCATCTTCATGAAGACTGCCCAAGCCCACCG 749205120 407314 NM_004519.3(KCNQ3):c.689G>A (p.Arg230His) KCNQ3 Jun 26, 2017 MedGen:CN517202 not provided germline 8 132180245 ATGTTCTGGCCACCTCCCTGCGAAGCCTGCGCTTCCTGCAGATCCTGCGCATGCTGCGGAT 142929172 446124 NM_000540.2(RYR1):c.14129+1G>A RYR1 Dec 17, 2015 MedGen:CN517202 not provided germline 19 38573308 GCAGTGGGACCGACTGGTGCTCAACACGCCGTAAGGACCCAGCCCCCACCTCAGGGTGGCA 864622056 221070 NM_017617.4(NOTCH1):c.1343G>A (p.Arg448Gln) NOTCH1 Feb 24, 2015 MedGen:C4014970,OMIM:616028 Adams-Oliver syndrome 5 de novo;germline 9 136517850 GCCAGTGTCTGCAGGGCTACACGGGCCCCCGATGCGAGATCGACGTCAACGAGTGCGTCTC 1085307477 415117 NM_000089.3(COL1A2):c.2673+1G>A COL1A2 Apr 28, 2017 MedGen:CN517202 not provided germline 7 94424444 CGTGGTCTACCAGGTGTTGCTGGTGCTGTGGTGAGTGCTTGACAGTATTCTGACTCCATTA 587783768 170039 NM_000252.2(MTM1):c.1260+1G>A MTM1 Feb 08, 2013 MedGen:C0410203,OMIM:310400,Orphanet:ORPHA596,SNOMED CT:46804001 Severe X-linked myotubular myopathy germline X 150658028 TGGATAAGTTTTGGACATAAATTTGCATCTGTGAGTAAACAAAGCTAATTTCTAAAAATAG 281865464 47882 NM_213599.2(ANO5):c.1407+5G>A ANO5 Nov 29, 2012 MedGen:C1969785,OMIM:611307,Orphanet:ORPHA206549 Limb-girdle muscular dystrophy, type 2L not provided 11 22257759 TTTCAGGAGCCACAGTGACATTATGGGTGAGCATTTCTTTAAAAATTGCTATAATTTCTTC 398124589 102495 NM_000056.4(BCKDHB):c.633+1G>A BCKDHB Aug 23, 2013 MedGen:C0024776,OMIM:248600,SNOMED CT:27718001 Maple syrup urine disease germline 6 80169031 GCATTTTTTGCCCATTGCCCAGGAATCAAGGTATGTTCATTTATGTACTTTATTTGATTTC 267607000 26683 NM_005676.4(RBM10):c.1235G>A (p.Trp412Ter) RBM10 May 14, 2010 MedGen:C1839463,OMIM:311900,Orphanet:ORPHA2886 TARP syndrome germline X 47180493 TGGCCAGCACTGCCATTGCTGCGGCCCAGTGGGCCATCTCACAGGTACTCAGACCCCTTGT 386134164 51330 NM_002739.4(PRKCG):c.367G>A (p.Gly123Arg) PRKCG Apr 18, 2013 MedGen:C1854369,OMIM:605361,Orphanet:ORPHA98763 Spinocerebellar ataxia 14 not provided 19 53889719 TTCTGCGACCACTGTGGCTCCCTCCTCTACGGGCTTGTGCACCAGGGCATGAAATGCTCCT 72551362 23176 NM_138712.3(PPARG):c.868G>A (p.Val290Met) PPARG Apr 01, 2003 MedGen:C1720861,OMIM:604367,Orphanet:ORPHA79083 Familial partial lipodystrophy 3 germline 3 12416836 CGCATCTTTCAGGGCTGCCAGTTTCGCTCCGTGGAGGCTGTGCAGGAGATCACAGAGTATG 864309527 215090 NM_171998.3(RAB39B):c.574G>A (p.Gly192Arg) RAB39B Sep 24, 2015 MedGen:C0796195,OMIM:311510,Orphanet:ORPHA2379;MedGen:CN234611 Parkinsonism, early onset with mental retardation;X-linked dominant Parkinson's disease germline X 155260871 ATCCAGGAGGGCTGGGAAGGGGTGAAGAGTGGATTTGTACCAAATGTGGTTCACTCTTCAG 1057520515 374902 NM_000430.3(PAFAH1B1):c.1159+1G>A PAFAH1B1 Sep 21, 2016 MedGen:C1843916,OMIM:607432;MedGen:CN517202 Lissencephaly 1;not provided germline 17 2680321 ATGCGCATGAACACTTTGTTACCTCCTTGGGTATGTACGCCTCGCGAGGTCTCTGAACATT 876661405 236870 NM_001039213.3(CEACAM16):c.505G>A (p.Gly169Arg) CEACAM16 Jun 01, 2016 MedGen:C3281297,OMIM:614614 Deafness, autosomal dominant 4b germline 19 44704140 ACCGCCGAGGTCCGCTGGTTCTTCAACGGTGGGGCCCTGCCCGTCGCTCTCCGCCTGGGCC 199476122 24772 m.3697G>A MT-ND1 Sep 19, 2013 MedGen:C0162671,OMIM:540000,Orphanet:ORPHA550,SNOMED CT:39925003;MedGen:C1839040,OMIM:500001;Human Phenotype Ontology:HP:0001112,MedGen:C0917796,OMIM:535000,Orphanet:ORPHA104,SNOMED CT:58610003 Juvenile myopathy, encephalopathy, lactic acidosis AND stroke;Leber hereditary optic neuropathy with dystonia;Leber's optic atrophy germline MT 3697 TGAGCATCAAACTCAAACTACGCCCTGATCGGCGCACTGCGAGCAGTAGCCCAAACAATCT 1085307356 414311 NM_001204.6(BMPR2):c.1453G>A (p.Asp485Asn) BMPR2 - MedGen:C0152171,OMIM:178600,SNOMED CT:26174007 Primary pulmonary hypertension germline 2 202552755 TCACTCAAGGAGACAATCGAAGACTGTTGGGACCAGGATGCAGAGGCTCGGCTTACTGCAC 120074186 67792 NM_000218.2(KCNQ1):c.914G>A (p.Trp305Ter) KCNQ1 Apr 06, 2017 MeSH:D008133,MedGen:C0023976,SNOMED CT:9651007;MedGen:CN517202 Long QT syndrome;not provided germline 11 2572979 AGTTCGGCAGCTACGCAGATGCGCTGTGGTGGGGGGTGGTAAGTCGGAAACTTCCAGGCAT 398122937 65608 NM_021954.3(GJA3):c.427G>A (p.Gly143Arg) GJA3 Jan 01, 2012 MedGen:C1866078,OMIM:601885 Zonular pulverulent cataract 3 germline 13 20142862 CGGGACGACCGCGGCAGGGTGCGCATGGCCGGGGCGCTGCTGCGGACCTACGTCTTCAACA 879254526 245563 NM_000527.4(LDLR):c.443G>A (p.Cys148Tyr) LDLR Dec 16, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11105349 CAGACGAGGCCTCCTGCCCGGTGCTCACCTGTGGTCCCGCCAGCTTCCAGTGCAACAGCTC 773734233 210429 NM_000071.2(CBS):c.700G>A (p.Asp234Asn) CBS Nov 10, 2016 Human Phenotype Ontology:HP:0002156,MedGen:C0019880;MedGen:CN517202 Homocystinuria;not provided germline 21 43065239 CGCAACGCCAGCAACCCCCTGGCTCACTACGACACCACCGCTGATGAGATCCTGCAGCAGT 397515518 76485 NM_000187.3(HGD):c.342+1G>A HGD Mar 09, 2016 MedGen:C0002066,OMIM:203500,Orphanet:ORPHA56 Alkaptonuria unknown 3 120652591 GCATCTCAGAAGAAAGTAGACTTTGTGAGTGTAAGTCAGTCCCATCCACACCCTCCCTACT 398122892 48054 NM_001111.4(ADAR):c.2675G>A (p.Arg892His) ADAR Jun 27, 2013 MedGen:C3539013,OMIM:615010 Aicardi-goutieres syndrome 6 germline 1 154589456 TTTCTGTTTTAAACACCTTCCTAGGGAATCGCTGTGTGAAAGGAGATTCTCTCAGCCTAAA 564069299 200114 NM_000255.3(MUT):c.1106G>A (p.Arg369His) MUT Apr 21, 2017 MedGen:C1855114,OMIM:251000;MedGen:CN517202 Methylmalonic aciduria due to methylmalonyl-CoA mutase deficiency;not provided germline 6 49451692 TATTTTAGGATCCCTACAATAATATTGTCCGTACTGCAATAGAAGCAATGGCAGCAGTATT 63751657 95331 NM_000249.3(MLH1):c.1731G>A (p.Ser577=) MLH1 May 29, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0009405,Orphanet:ORPHA443090;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Hereditary nonpolyposis colon cancer;Lynch syndrome;not provided germline;unknown 3 37042331 TTTTGCCAATTTTGGTGTTCTCAGGTTATCGGTAAGTTTAGATCCTTTTCACTTCTGAAAT 587776855 32985 NM_000416.2(IFNGR1):c.200+1G>A IFNGR1 Mar 01, 1998 MedGen:C0694566,OMIM:209950,SNOMED CT:240413000 Disseminated atypical mycobacterial infection germline 6 137206962 TGTTTTTACCGTAGAGGTAAAGAACTATGGGTGAGTGTCACTCTTTTATTTATCCTTTTTA 587779798 132762 NM_000038.5(APC):c.531+5G>A APC Dec 06, 2016 MedGen:CN517202 not provided germline 5 112775742 TAGATAGTCTTCCTTTAACTGAAAATGTAAGTAACTTGGCAGTACAACTTATTTGAAACTT 886044725 237699 NM_000350.2(ABCA4):c.1293G>A (p.Trp431Ter) ABCA4 Jan 01, 2016 MeSH:C535804,MedGen:C1855465,OMIM:248200 Stargardt disease 1 germline 1 94078653 GGAACACGTTAGGAAGTTGGTCAAAGCCTGGGAAGAAGTAGGGCCCCAGATCTGGTACTTC 104894513 17297 NM_000101.3(CYBA):c.269G>A (p.Arg90Gln) CYBA Nov 01, 1992 MedGen:C1856255,OMIM:233690 Granulomatous disease, chronic, autosomal recessive, cytochrome b-negative germline 16 88646773 TCGGGCCCTTTACCAGGAATTACTATGTTCGGGCCGTCCTGCATCTCCTGTGAGTCCCCGT 587777003 70536 NM_001258221.1(KCTD1):c.185G>A (p.Gly62Asp) KCTD1 Jan 29, 2014 MedGen:C1867020,OMIM:181270,Orphanet:ORPHA2036 Scalp ear nipple syndrome germline;unknown 18 26476639 TCTATCACAGAATCGGAAGACTTTTTGATGGTACAGAGCCCATTGTTTTGGACAGTCTCAA -1 417150 NM_019098.4(CNGB3):c.3G>A (p.Met1Ile) CNGB3 Mar 27, 2017 MedGen:C1849792,OMIM:262300 Achromatopsia 3 unknown 8 86743625 GAGGGTTTTCAGAACCACCTCAGAGAAGATGTTTAAATCGCTGACAAAAGTCAACAAGGTG 199472800 67671 NM_000218.2(KCNQ1):c.1664G>A (p.Arg555His) KCNQ1 Jan 09, 2017 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MeSH:D008133,MedGen:C0023976,SNOMED CT:9651007;MedGen:CN517202 Congenital long QT syndrome;Long QT syndrome;not provided germline 11 2776033 ACTCGCAGGGCCACCTCAACCTCATGGTGCGCATCAAGGAGCTGCAGAGGAGGTGGGCACG 118204063 16571 NM_000237.2(LPL):c.506G>A (p.Gly169Glu) LPL Jan 26, 1996 MedGen:C0023817,OMIM:238600,Orphanet:ORPHA309015,SNOMED CT:238086005,SNOMED CT:275598004 Hyperlipoproteinemia, type I germline 8 19953386 GCCTTGGAGCCCATGCTGCTGGCATTGCAGGAAGTCTGACCAATAAGAAAGTCAACAGAAT 121918019 28722 NM_000478.5(ALPL):c.526G>A (p.Ala176Thr) ALPL Jan 02, 2014 MedGen:C0220743,OMIM:241510,SNOMED CT:30174008;Human Phenotype Ontology:HP:0003239,MedGen:C0268412,OMIM:241500,Orphanet:ORPHA247651,SNOMED CT:55236002 Childhood hypophosphatasia;Infantile hypophosphatasia germline;unknown 1 21564094 ACCACGAGAGTGAACCATGCCACCCCCAGCGCCGCCTACGCCCACTCGGCTGACCGGGACT -1 439996 NM_015331.2(NCSTN):c.1101+1G>A NCSTN Dec 01, 2017 MedGen:CN028850,OMIM:142690 Familial acne inversa 1 germline 1 160352992 AATGTTGACTCATTTGTGGAGCTGGGACAGGTATGTGGCATGTCCCCCAGCCCCTTCCTTT 376281345 487060 NM_002495.3(NDUFS4):c.99-1G>A NDUFS4 Feb 12, 2016 MedGen:C0023264,OMIM:256000,Orphanet:ORPHA506,SNOMED CT:29570005 Leigh syndrome germline 5 53603451 TCCTTTTTTAACTTAAAGTCTTGCACTGCAGGTCGTTGAGGACTTCCACATGGAGATTGGC 281874723 35607 NM_000495.4(COL4A5):c.386G>A (p.Gly129Glu) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108571414 CCATGCTCTTTATTTTTAACTCCTTCTAGGGAGAACGTGGATTTCCAGGCAGTCCCGGTTT 60458016 29564 NM_170707.3(LMNA):c.1072G>A (p.Glu358Lys) LMNA May 16, 2017 MedGen:C0410190,OMIM:181350,Orphanet:ORPHA98853,SNOMED CT:240072005;MedGen:CN043576;MedGen:C2750785,OMIM:613205,Orphanet:ORPHA157973;MedGen:C1449563,OMIM:115200,Orphanet:ORPHA300751;MedGen:C1720860,OMIM:151660,Orphanet:ORPHA2348;MedGen:C1834653,OMIM:159001,Orphanet:ORPHA264;MedGen:C0432291,OMIM:248370,Orphanet:ORPHA2457,SNOMED CT:109419009;MeSH:D009136,MedGen:C0026850,Orphanet:ORPHA98473;MedGen:CN517202 Benign scapuloperoneal muscular dystrophy with cardiomyopathy;Charcot-Marie-Tooth disease, type 2;Congenital muscular dystrophy, LMNA-related;Dilated cardiomyopathy 1A;Familial partial lipodystrophy 2;Limb-girdle muscular dystrophy, type 1B;Mandibuloacral dysostosis;Muscular dystrophy;not provided germline 1 156136036 ATGCGGGCAAGGATGCAGCAGCAGCTGGACGAGTACCAGGAGCTTCTGGACATCAAGCTGG 199422294 38854 NM_198253.2(TERT):c.1892G>A (p.Arg631Gln) TERT May 10, 2012 MedGen:C3151443,OMIM:613989;MedGen:C1800706,OMIM:178500,Orphanet:ORPHA79126,SNOMED CT:28168000 Dyskeratosis congenita, autosomal dominant, 2;Idiopathic fibrosing alveolitis, chronic form germline 5 1280216 TCCGCTTCATCCCCAAGCCTGACGGGCTGCGGCCGATTGTGAACATGGACTACGTCGTGGG 137853187 15584 NM_001145308.4(LRTOMT):c.328G>A (p.Glu110Lys) LRTOMT Nov 01, 2008 MedGen:C1969621,OMIM:611451 Deafness, autosomal recessive 63 germline 11 72106180 ACCACCCTGGACCACTGGAGCAGCCGCTGCGAGTACTTGAGCCACATGGGGCCTGTCAAAG 121913500 166215 NM_001282386.1(IDH1):c.395G>A (p.Arg132His) IDH1 May 31, 2016 Human Phenotype Ontology:HP:0004808,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:ORPHA519,SNOMED CT:17788007;Human Phenotype Ontology:HP:0030078,MeSH:C538231,MedGen:C0152013;MedGen:C0007112;MeSH:D003528,MedGen:C0010606;Human Phenotype Ontology:HP:0009592,MeSH:D001254,MedGen:C0004114,Orphanet:ORPHA94,SNOMED CT:38713004;Human Phenotype Ontology:HP:0010796,MedGen:C0677865;MeSH:D015179,MedGen:CN236642;Human Phenotype Ontology:HP:0100843,MeSH:D005909,MedGen:C0017636,SNOMED CT:63634009;MedGen:C4016231;MedGen:C2239176,OMIM:114550,Orphanet:ORPHA88673,SNOMED CT:187769009,SNOMED CT:25370001;MeSH:C562393,MedGen:C0151779,SNOMED CT:93655004;Human Phenotype Ontology:HP:0002885,MeSH:D008527,MedGen:C0025149,OMIM:155255,Orphanet:ORPHA616;Human Phenotype Ontology:HP:0006775,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:ORPHA29073,SNOMED CT:109989006,SNOMED CT:55921005;MeSH:D009190,MedGen:C0026986,OMIM:614286;Human Phenotype Ontology:HP:0030692,MeSH:D001932,MedGen:C0006118,SNOMED CT:126952004;Human Phenotype Ontology:HP:0100013,MeSH:D001943,MedGen:C1458155,Orphanet:ORPHA180250,SNOMED CT:126926005;MeSH:D009837,MedGen:C0028945,SNOMED CT:443936004;Human Phenotype Ontology:HP:0006740,MedGen:C0279680 Acute myeloid leukemia;Adenocarcinoma of lung;Adenocarcinoma of prostate;Adenoid cystic carcinoma;Astrocytoma;Brainstem glioma;Colorectal Neoplasms;Glioblastoma;Glioblastoma multiforme, somatic;Hepatocellular carcinoma;Malignant melanoma of skin;Medulloblastoma;Multiple myeloma;Myelodysplastic syndrome;Neoplasm of brain;Neoplasm of the breast;Oligodendroglioma;Transitional cell carcinoma of the bladder somatic 2 208248388 GTGGATGGGTAAAACCTATCATCATAGGTCGTCATGCTTATGGGGATCAAGTAAGTCATGT 990043411 359221 NM_000433.3(NCF2):c.257+1G>A NCF2 Jun 29, 2015 MedGen:CN517202 not provided germline 1 183586894 ACGAGGGATGCTCTACTACCAGACAGAGAAGTAAGTGGTTCAATGTTGCACCAACTGGAGG 672601324 26095 NM_000252.2(MTM1):c.679-1G>A MTM1 Jan 01, 1998 MedGen:C0410203,OMIM:310400,Orphanet:ORPHA596,SNOMED CT:46804001 Severe X-linked myotubular myopathy germline X 150645682 TGATAGCTTAAACTTTCTGACTTAACCATAGGTGCTGTCATGGATTCATCCAGAAAATAAG 386834035 19038 NM_017739.3(POMGNT1):c.652+1G>A POMGNT1 Nov 01, 2008 MedGen:C3150412,OMIM:613151;MedGen:C0457133,OMIM:253280,Orphanet:ORPHA588,SNOMED CT:277950001 Congenital muscular dystrophy-dystroglycanopathy with mental retardation, type B3;Muscle eye brain disease germline 1 46194843 ACACATGGGCCTTCGTGGGACGAAAAGGAGGTGCCGGCATCAGAGGCCATCCACTCTGTAG 878853691 391147 NM_000143.3(FH):c.267+1G>A FH Jun 16, 2017 MedGen:C0342770,OMIM:606812,Orphanet:ORPHA24,SNOMED CT:237983002 Fumarase deficiency germline 1 241517181 AAGATTGGAGGTGTGACAGAACGCATGCCAGTAAGTGGCATTTGTGGAAATGTTGGCTATT 1064796632 410982 NM_000268.3(NF2):c.517-1G>A NF2 Feb 21, 2017 MedGen:CN517202 not provided germline 22 29655593 AGGTTTTTTATTTTGCTCTATTTTTTGGTAGGTAATAAATCTGTATCAGATGACTCCGGAA 104894121 22351 NM_004560.3(ROR2):c.2247G>A (p.Trp749Ter) ROR2 Sep 01, 2003 Human Phenotype Ontology:HP:0005831,MedGen:C1862112,OMIM:113000 Brachydactyly type B1 germline 9 91724247 CAAGGACATCCACAGCCGGCTCCGAGCCTGGGGCAACCTTTCCAACTACAACAGCTCGGCG 121434277 18630 NM_000016.5(ACADM):c.447G>A (p.Met149Ile) ACADM Jun 13, 2014 MedGen:C0220710,OMIM:201450,Orphanet:ORPHA42,SNOMED CT:128596003 Medium-chain acyl-coenzyme A dehydrogenase deficiency germline 1 75734850 TCAACAAAAGAAGAAGTATTTGGGGAGAATGACTGAGGAGCCATTGATGTGTGTGAGTATG 587776539 17434 NM_000045.3(ARG1):c.57+1G>A ARG1 Sep 01, 1995 MedGen:C0268548,OMIM:207800,Orphanet:ORPHA90,SNOMED CT:23501004 Arginase deficiency germline 6 131573340 ATTATTGGAGCTCCTTTCTCAAAGGGACAGGTAAGGAAAAAAGTCTTTCTTTGAATTCCTG -1 442160 NM_000435.2(NOTCH3):c.602G>A (p.Cys201Tyr) NOTCH3 Oct 12, 2015 MedGen:CN517202 not provided germline 19 15192037 GGCCACTATGTGAGAACCCCGCGGTGCCCTGTGCACCCTCACCATGCCGTAACGGGGGCAC 879254420 245395 NM_000527.4(LDLR):c.169G>A (p.Asp57Asn) LDLR Mar 25, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11100324 GATGGCAGCGCTGAGTGCCAGGATGGCTCTGATGAGTCCCAGGAGACGTGCTGTGAGTCCC -1 434352 NM_000527.4(LDLR):c.2530G>A (p.Gly844Ser) LDLR - MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11129653 GATGAGGTCCACATTTGCCACAACCAGGACGGCTACAGCTACCCCTCGGTGAGTGACCCTC 397515330 76388 NM_001098512.2(PRKG1):c.530G>A (p.Arg177Gln) PRKG1 May 17, 2017 MedGen:C3809513,OMIM:615436;MedGen:CN118826,Orphanet:ORPHA91387;MedGen:CN517202 Aortic aneurysm, familial thoracic 8;Thoracic aortic aneurysm and aortic dissection;not provided germline 10 51467819 GGGAATTGGCTATTCTTTACAACTGTACCCGGACAGCGACCGTCAAGAGTAAGACTATTTT 587782539 152265 NM_032043.2(BRIP1):c.2576-1G>A BRIP1 Apr 17, 2013 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 17 61686166 AAATTTTCCCTGGGTTTACCTTTTTCTTTAGGACTTTCTAAATGGGTACGGCAGCAGATTC 104894623 23482 NM_000304.3(PMP22):c.199G>A (p.Ala67Thr) PMP22 Jun 10, 2003 MedGen:C0393814,OMIM:162500,Orphanet:ORPHA640,SNOMED CT:230558006 Hereditary liability to pressure palsies germline 17 15239591 TTTCCCCCAGAATGGCTGCAGTCTGTCCAGGCCACCATGATCCTGTCGATCATCTTCAGCA 62638208 20885 NM_000843.3(GRM6):c.1565G>A (p.Cys522Tyr) GRM6 Nov 01, 2005 MedGen:C1850362,OMIM:257270;MedGen:CN517202 Congenital stationary night blindness, type 1B;not provided germline 5 178986689 AGGTGCCCTCGTCTCTGTGCAGCCTGCCCTGCGGGCCGGGGGAGCGGAAGAAGATGGTGAA -1 481861 NM_000197.1(HSD17B3):c.202-1G>A HSD17B3 Nov 13, 2017 MedGen:CN517202 not provided germline 9 96254944 TTGTCTCTTGGTTTTTCACTCCCACTCTCAGCTAGCAAAACGTGGACTCAATGTTGTCCTT 796051858 18086 NM_000051.3(ATM):c.496+5G>A ATM Jul 06, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C1876175,Orphanet:ORPHA370109;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Ataxia-telangiectasia syndrome;Ataxia-telangiectasia variant;Hereditary cancer-predisposing syndrome;not provided germline 11 108235839 TGAAATATCTCAGCAACAGTGGTTAGGTATGTTTTGAAGGTTGTTGTTTGTGAATTTTTCC 879254754 245919 NM_000527.4(LDLR):c.1013G>A (p.Cys338Tyr) LDLR Nov 05, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline;unknown 19 11110724 TCTGCAATGACCTTAAGATCGGCTACGAGTGCCTGTGCCCCGACGGCTTCCAGCTGGTGGC 137852600 24897 NM_000044.4(AR):c.2231G>A (p.Gly744Glu) AR Dec 01, 2002 MedGen:C0039585,OMIM:300068,SNOMED CT:12313004 Androgen resistance syndrome germline X 67717535 AGATGGCTGTCATTCAGTACTCCTGGATGGGGCTCATGGTGTTTGCCATGGGCTGGCGATC -1 443495 NM_002292.3(LAMB2):c.4573+1G>A LAMB2 Aug 23, 2017 MedGen:CN517202 not provided germline 3 49122703 TTATCCAGAGTGTGAAGGACTTCCTCAACCGTGAGCCTCCCACGTGTCCCAGGCCATGTGG 587780437 135558 NM_005045.3(RELN):c.7490+1G>A RELN Aug 07, 2013 MedGen:C0796089,OMIM:257320,Orphanet:ORPHA89844 Lissencephaly 2 germline 7 103523390 CCATGGGAGATGCATCCAGGGAAACTGCGTGTAAGTCGGTTTTTTTCTTCCTTCTGTTGAA 111033308 19855 NM_000441.1(SLC26A4):c.1489G>A (p.Gly497Ser) SLC26A4 Mar 30, 2017 Human Phenotype Ontology:HP:0011387,MedGen:C1863752,OMIM:600791;Human Phenotype Ontology:HP:0011387,MedGen:C1863752,OMIM:600791;MedGen:C0271829,OMIM:274600,Orphanet:ORPHA705,SNOMED CT:70348004;MedGen:C0271829,OMIM:274600,Orphanet:ORPHA705,SNOMED CT:70348004;MedGen:CN517202 Enlarged vestibular aqueduct;Enlarged vestibular aqueduct;Pendred's syndrome;Pendred's syndrome;not provided germline;unknown 7 107695984 ATAGTGTCCATCATTCTGGGGCTGGATCTCGGTTTACTAGCTGGCCTTATATTTGGACTGT 879255431 247114 NM_144672.3(OTOA):c.755G>A (p.Trp252Ter) OTOA Oct 16, 2015 MedGen:CN517202 not provided unknown 16 21697790 CTTTATTTTTTGTAGATGACTCTGCTTCATGGGTCAGTGCGGAACACTTATGGGTTTTGGG 128621192 26401 NM_000061.2(BTK):c.755G>A (p.Trp252Ter) BTK Oct 01, 1994 MedGen:C0221026,OMIM:300755,Orphanet:ORPHA47,SNOMED CT:65880007 X-linked agammaglobulinemia germline X 101360589 TTATCTTGGAGGAAAGCAACTTACCATGGTGGAGAGCACGAGATAAAAATGGGTGAGTCCA 28936395 23573 NM_004442.7(EPHB2):c.2035G>A (p.Asp679Asn) EPHB2 Aug 01, 2014 MedGen:C1863600,OMIM:603688 Prostate cancer/brain cancer susceptibility somatic 1 22906853 CTGAGCGAAGCCTCCATCATGGGCCAGTTCGACCATCCCAACGTCATCCACCTGGAGGGTG 201791209 223311 NM_018297.3(NGLY1):c.931G>A (p.Glu311Lys) NGLY1 Jan 07, 2016 MedGen:C3808991,OMIM:615273,Orphanet:ORPHA404454 Congenital disorder of deglycosylation inherited 3 25737406 CTTTTGGAAACAAGATGTGGACGGTGTGGCGAGTGGGCCAATTGTTTTACACTGTGCTGCC 281874677 47362 NM_000495.4(COL4A5):c.1744G>A (p.Gly582Arg) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108597533 CCTGGTTTACCTGGCACTCCTGGACAGGATGGATTGCCAGGGCTTCCTGGCCCGAAAGGAG 886037750 205413 NM_000208.3(INSR):c.394G>A (p.Gly132Ser) INSR - MedGen:C0271695,OMIM:262190,Orphanet:ORPHA769,SNOMED CT:33559001 Pineal hyperplasia AND diabetes mellitus syndrome germline 19 7267603 ATCTTCGAGATGGTTCACCTCAAGGAACTCGGCCTCTACAACCTGATGAACATCACCCGGG 199422117 26928 NM_001061.4(TBXAS1):c.1238G>A (p.Arg413Gln) TBXAS1 Mar 01, 2008 MedGen:C4016444 Ghosal hematodiaphyseal syndrome germline 7 140015731 CCCGACCTGGTGTTTCCCTCAGATTCACACGGGAGGCAGCTCAGGACTGCGAGGTGCTGGG 864622558 221554 NM_001182.4(ALDH7A1):c.986G>A (p.Arg329Lys) ALDH7A1 Jan 06, 2016 MedGen:C1849508,OMIM:266100 Pyridoxine-dependent epilepsy germline 5 126559262 TCTTCGCTGCTGTGGGAACAGCTGGCCAGAGGTGTACCACTGCGAGGCGACTGGTGAGTAT -1 439898 NM_194248.2(OTOF):c.897+5G>A OTOF Jul 01, 2017 MedGen:C1832828,OMIM:601071 Deafness, autosomal recessive 9 germline 2 26494937 CCACTAACTGCCCCTATTACAACGAGGTCAGTGGCCCTGTGGGGAAAGGAGCCTCTGTAAA 397507545 49029 NM_002834.4(PTPN11):c.1507G>A (p.Gly503Arg) PTPN11 Jul 31, 2017 MeSH:D009634,MedGen:C0028326,Orphanet:ORPHA648,SNOMED CT:205824006;MedGen:CN166718,Orphanet:ORPHA98733;MedGen:CN517202 Noonan syndrome;Rasopathy;not provided germline 12 112489083 ACCATCCAGATGGTGCGGTCTCAGAGGTCAGGGATGGTCCAGACAGAAGCACAGTACCGAT 587779548 107132 NM_000090.3(COL3A1):c.2995G>A (p.Gly999Ser) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189005413 AGTGGAGAACGTGGTCCCCCTGGACCCCAGGGTCTTCCTGGTCTGGCTGGTACAGCTGGTG 121918163 16011 NM_001113378.1(FANCI):c.3854G>A (p.Arg1285Gln) FANCI Apr 20, 2007 MedGen:C1836861,OMIM:609053 Fanconi anemia, complementation group I germline 15 89315319 TGATGCAGCACATGAAGCTCAGCACCTCACGAGACTTCAAGATCAAAGGAAACATCCTAGA -1 444282 NM_006766.4(KAT6A):c.3353-1G>A KAT6A Nov 11, 2015 MedGen:CN517202 not provided germline 8 41934868 CCTGTCTTTGTTTTTTTTCCTTCCTGTATAGACACTCCTATCTTAAAGCCAGTATCTCTTT 397514401 36182 NM_000060.4(BTD):c.1157G>A (p.Trp386Ter) BTD Dec 04, 2012 MedGen:C0220754,OMIM:253260,Orphanet:ORPHA79241,SNOMED CT:8808004 Biotinidase deficiency not provided 3 15645013 AGGAAGTCCACTGTGATGAGGCCACCAAGTGGAACGTGAATGCTCCTCCCACATTTCACTC 121913596 447442 NM_000530.7(MPZ):c.103G>A (p.Asp35Asn) MPZ Jul 31, 2017 MedGen:C0751036,Orphanet:ORPHA65753,SNOMED CT:398040009 Charcot-Marie-Tooth disease, type I germline 1 161307389 TCCCCGGCCCAGGCCATCGTGGTTTACACCGACAGGGAGGTCCATGGTGCTGTGGGCTCCC 587783967 168436 NM_133433.3(NIPBL):c.5328+1G>A NIPBL Feb 08, 2013 MedGen:CN029798,OMIM:122470 Cornelia de Lange syndrome 1 germline 5 37020878 GCCCAGAGCTTTGATATTTATTTGACACAGGTAAACTGGATAAGAATTCCTTATACAGTGA 397514594 48391 NM_001083614.1(EARS2):c.500G>A (p.Cys167Tyr) EARS2 Nov 20, 2012 MedGen:C3554079,OMIM:614924,Orphanet:ORPHA314051 Combined oxidative phosphorylation deficiency 12 germline 16 23535346 CTCTGCTCCCCATCAGGTATGACAATCGGTGCAGGAACATGAGCCAGGAGCAGGTGGCCCA 137852503 25119 NM_000194.2(HPRT1):c.419G>A (p.Gly140Asp) HPRT1 Oct 24, 2013 na;MedGen:C0023374,OMIM:300322,SNOMED CT:10406007 HPRT TOKYO;Lesch-Nyhan syndrome germline X 134493524 TTCTTTTTTGAAAGGATATAATTGACACTGGCAAAACAATGCAGACTTTGCTTTCCTTGGT 794728804 196743 NM_001035.2(RYR2):c.14311G>A (p.Val4771Ile) RYR2 Apr 27, 2017 MedGen:CN230736;MedGen:C1631597,Orphanet:ORPHA3286;MedGen:CN517202 Cardiovascular phenotype;Catecholaminergic polymorphic ventricular tachycardia;not provided germline 1 237808913 TGTCACATTGTTTTCCAGCTCGTATTAACCGTTGGCTTATTAGCTGTTGTTGTATACCTAT 191107774 99875 NM_001031847.2(CPT1A):c.281+1G>A CPT1A Aug 13, 2012 MedGen:C0342789,OMIM:255120,SNOMED CT:238001003 Carnitine palmitoyltransferase I deficiency germline 11 68812436 TGCAAAAATCAATCGGACTCTGGAAACGGCGTAAGTAATCCTGTGAAATCTCCAATTGTCT 122468177 26442 NM_015884.3(MBTPS2):c.261G>A (p.Met87Ile) MBTPS2 Apr 01, 2009 Gene:266959,MedGen:C1839988,OMIM:308205,Orphanet:ORPHA2273 IFAP syndrome with or without BRESHECK syndrome germline X 21845207 TTTTGGAATGGTGTTTGGCGTAATTGCCATGTTTAGCTCATTTTTTCTCCTTGGAAAAACG 751631278 59376 NM_025152.2(NUBPL):c.693+1G>A NUBPL May 02, 2013 MedGen:C1838979,OMIM:252010 Mitochondrial complex I deficiency germline 14 31826715 GCTGAGATGTTTCGCAGAGTCCACGTGCCCGTAAGCGTTTACAGCTTCACTGTGAAAAATA 121913628 29131 NM_000257.3(MYH7):c.2770G>A (p.Glu924Lys) MYH7 Jun 16, 2017 MedGen:CN230736;MedGen:C3495498,OMIM:192600;Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Cardiovascular phenotype;Familial hypertrophic cardiomyopathy 1;Hypertrophic cardiomyopathy;Primary familial hypertrophic cardiomyopathy;not provided germline 14 23424059 CAGCTGGAGGCCAAGGTGAAGGAGATGAACGAGAGGCTGGAGGATGAGGAGGAGATGAATG 104894281 24008 NM_203285.1(NECTIN1):c.554G>A (p.Trp185Ter) NECTIN1 Oct 01, 2001 MedGen:C2931488,OMIM:225060,Orphanet:ORPHA3253;MedGen:C1833538 Cleft lip/palate-ectodermal dysplasia syndrome;Orofacial cleft 7 germline 11 119677734 CCAATGGGAAGCCTCCCAGTGTGGTATCCTGGGAAACTCGGTTAAAAGGTGAGGCAGAGTA 121908454 20894 NM_022336.3(EDAR):c.1124G>A (p.Arg375His) EDAR Oct 01, 2004 MedGen:C0406702,OMIM:224900,Orphanet:ORPHA248,SNOMED CT:27025001 Autosomal recessive hypohidrotic ectodermal dysplasia syndrome germline 2 108897130 ACTCTGAGAAGGCTGTTGTGAAAACGTGGCGCCACCTCGCCGAGAGCTTCGGCCTGAAGAG 267607464 77476 NM_005554.3(KRT6A):c.487G>A (p.Glu163Lys) KRT6A Apr 19, 2016 MedGen:CN517202 not provided germline 12 52492702 GATCCCACCATCCAGCGGGTGCGGGCTGAGGAGCGTGAACAGATCAAGACCCTCAACAACA 121434552 32648 NM_000717.4(CA4):c.206G>A (p.Arg69His) CA4 Aug 01, 2007 MedGen:C1833245,OMIM:600852 Retinitis pigmentosa 17 germline 17 60156653 CCAAGGCAAAGGTGGACAAAAAACTGGGACGCTTCTTCTTCTCTGGCTACGATAAGAAGCA 587779539 107090 NM_000090.3(COL3A1):c.1862G>A (p.Gly621Glu) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188997382 ATGGTGAAACTGGACCTCAGGGACCCCCAGGGCCTACTGTAAGTTCACTCATATAAAATTG 965522059 433122 NM_025114.3(CEP290):c.1066-1G>A CEP290 Mar 08, 2017 MedGen:CN169374 not specified germline 12 88125370 GGGATATATATTGTTTTAAAATATTTTATAGGGTATACAGGAACGAGACAGTCAAATTAAG -1 431140 NM_012160.4(FBXL4):c.1317G>A (p.Glu439=) FBXL4 Aug 10, 2017 MedGen:C3809592,OMIM:615471,Orphanet:ORPHA369897 Mitochondrial DNA depletion syndrome 13 (encephalomyopathic type) germline 6 98899268 ACGACTTGTTCTCTATCGAACAAAAGTAGAGGTGAGAGTAATTCATAATTTTCATCATTGC 587776961 59489 NM_001042498.2(SLC35A2):c.991G>A (p.Val331Ile) SLC35A2 Nov 20, 2015 MedGen:C3806688,OMIM:300896,Orphanet:ORPHA356961;MedGen:CN517202 CONGENITAL DISORDER OF GLYCOSYLATION, TYPE IIm;not provided de novo;germline;somatic X 48904918 GACCCATTATTTGCCCTTGGCGCTGGACTCGTCATTGGTGCTGTCTACCTCTACAGCCTTC 864309666 215677 NM_020680.3(SCYL1):c.1230+1G>A SCYL1 Dec 03, 2015 MedGen:C1843891,OMIM:607454,Orphanet:ORPHA98773 Spinocerebellar ataxia 21 germline 11 65532806 AACCCTGCCATCCGGGAGCAGACGGTCAAGGTGGGTGTGGCCAGGCCCAGAGTGGCTACCC 398122998 97526 NM_001271.3(CHD2):c.4971G>A (p.Trp1657Ter) CHD2 Sep 10, 2015 MedGen:C3809278,OMIM:615369 Epileptic encephalopathy, childhood-onset germline 15 93020076 CTATGGTGGTGGCAACAACAATCCACCATGGGGAAGCGACAGGCACCATCAGTATGAGCAG 398122935 59366 NM_031850.3(AGTR1):c.356G>A (p.Trp119Ter) AGTR1 Jun 14, 2016 Human Phenotype Ontology:HP:0008660,MedGen:C0266313,OMIM:267430,SNOMED CT:204949001 Renal dysplasia germline 3 148741286 ACTTATGCTTTTTACTGACTTTGCCACTATGGGCTGTCTACACAGCTATGGAATACCGCTG 886042022 264367 NM_000037.3(ANK1):c.2736-1G>A ANK1 Oct 10, 2016 MedGen:CN517202 not provided germline 8 41696588 GAAGCCCAACGTGCATCTGCCCCACTCCTAGGTTTCTGGTGAGCTTCATGGTTGACGCCCG 876661066 232116 NM_000214.2(JAG1):c.81+1G>A JAG1 Sep 11, 2015 MedGen:CN517202 not provided germline 20 10673449 CTCGCCCTGCTCTGTGCCCTGCGAGCCAAGGTAGGAGCCCTTCTCCGGGCCTCCCTCCCAG 397516031 51898 NM_000256.3(MYBPC3):c.3627+1G>A MYBPC3 Aug 22, 2016 MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Primary familial hypertrophic cardiomyopathy;not provided germline 11 47332565 CTCTGCTGTGCTGTCCGGGGTAGCCCCAAGGTAGGGAACTTTAGGCGCTGGTCCAGGCCGA 886039380 259866 NM_000162.3(GCK):c.533G>A (p.Gly178Glu) GCK Jul 21, 2015 MedGen:CN517202 not provided germline 7 44150015 CCAAGGGCTTCAAGGCCTCAGGAGCAGAAGGGAACAATGTCGTGGGGCTTCTGCGAGACGC 794728531 197496 NM_000218.2(KCNQ1):c.1685+1G>A KCNQ1 Oct 24, 2017 MeSH:D008133,MedGen:C0023976,SNOMED CT:9651007;MedGen:CN517202 Long QT syndrome;not provided germline 11 2776055 CATGGTGCGCATCAAGGAGCTGCAGAGGAGGTGGGCACGGCCAAACGGCAGCGGGGAGGGT 104893983 17489 NM_000434.3(NEU1):c.727G>A (p.Gly243Arg) NEU1 Jun 28, 2013 MedGen:C0268228;MedGen:CN517202 Sialidosis type I;not provided germline 6 31860510 AGCGATGATCATGGTGCCTCCTGGCGCTACGGAAGTGGGGTCAGCGGCATCCCCTACGGTC 80359101 67273 NM_000059.3(BRCA2):c.8489G>A (p.Trp2830Ter) BRCA2 Aug 01, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline 13 32370957 TTTTTGGTGTGTGTAACACATTATTACAGTGGATGGAGAAGACATCATCTGGATTATACAT 121912507 29466 NM_000238.3(KCNH2):c.1882G>A (p.Gly628Ser) KCNH2 Feb 25, 2016 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MedGen:C3150943,OMIM:613688;MedGen:CN517202 Congenital long QT syndrome;Long QT syndrome 2;not provided germline 7 150951511 ACCTTCAGCAGCCTCACCAGTGTGGGCTTCGGCAACGTCTCTCCCAACACCAACTCAGAGA 587776438 165636 NC_012920.1:m.10254G>A MT-ND3 Apr 17, 2014 MedGen:C0023264,OMIM:256000,Orphanet:ORPHA506,SNOMED CT:29570005 Leigh syndrome germline MT 10254 TTCTTAGTAGCTATTACCTTCTTATTATTTGATCTAGAAATTGCCCTCCTTTTACCCCTAC 794726798 187853 NM_001165963.1(SCN1A):c.1007G>A (p.Cys336Tyr) SCN1A Dec 20, 2014 MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002 Severe myoclonic epilepsy in infancy de novo 2 166048907 TCCTGGAGGGTTTTTTAGATGCACTACTATGTGGAAATAGCTCTGATGCAGGGTAAGTCAA 80356604 34712 NM_194248.2(OTOF):c.5712+1G>A OTOF Apr 26, 2011 MedGen:C1832828,OMIM:601071 Deafness, autosomal recessive 9 not provided 2 26460851 CGCAATGAGAACGATGAGTTTGAGCTCACGGTGCGCACCCCTTCCTGCTCGGGCAGTAGGC 1057519413 359044 NM_002875.4(RAD51):c.877G>A (p.Ala293Thr) RAD51 Dec 09, 2016 MedGen:C4284093,OMIM:617244 Fanconi anemia, complementation group R germline 15 40729955 CCCAAAAAACCTATTGGAGGAAATATCATCGCCCATGCATCAACAACCAGGTAAGGTGTTG 780722371 414319 NM_001204.6(BMPR2):c.1523G>A (p.W508*) BMPR2 - MedGen:C0152171,OMIM:178600,SNOMED CT:26174007 Primary pulmonary hypertension germline 2 202552825 AGGAAAGGATGGCTGAACTTATGATGATTTGGGAAAGAAACAAATCTGTGAGCCCAACAGT 281865063 47002 NM_139241.3(FGD4):c.1325G>A (p.Arg442His) FGD4 Sep 13, 2012 MedGen:C1836336,OMIM:609311,Orphanet:ORPHA99954 Charcot-Marie-Tooth disease, type 4H not provided 12 32611270 TAGCTGCTCGGAACACTTCAGCACAAGAACGCTACCTTTTCTTAGTGAGTATTATAGTGTT 387906736 38962 m.5556G>A MT-TW Mar 01, 2010 MedGen:C0162666,SNOMED CT:447292006 Mitochondrial encephalomyopathy germline MT 5556 AATACAGACCAAGAGCCTTCAAAGCCCTCAGTAAGTTGCAATACTTAATTTCTGTAACAGC 398123308 98704 NM_000297.3(PKD2):c.709+1G>A PKD2 Dec 18, 2012 MedGen:CN517202 not provided germline 4 88019572 ACCTCCTTTTTCTCATAGTCTTGTGCATCTGTAAGTAGAATATTTCCTTGCACTAATGGGA 34718174 30265 NM_000518.4(HBB):c.209G>A (p.Gly70Asp) HBB May 01, 2000 MedGen:CN169374 not specified germline 11 5226683 AGGTGAAGGCTCATGGCAAGAAAGTGCTCGGTGCCTTTAGTGATGGCCTGGCTCACCTGGA 756853742 485697 NM_000348.3(SRD5A2):c.598G>A (p.Glu200Lys) SRD5A2 Dec 26, 2012 MedGen:C0268297,OMIM:264600,Orphanet:ORPHA753,SNOMED CT:57514000 3-Oxo-5 alpha-steroid delta 4-dehydrogenase deficiency germline 2 31529407 TCTGGAGCCAATTTCCTCGGTGAGATCATTGAATGGATCGGCTATGCCCTGGCCACTTGGT 587777125 106518 NM_005763.3(AASS):c.194G>A (p.Arg65Gln) AASS Apr 09, 2013 Human Phenotype Ontology:HP:0002161,MedGen:C0268553,OMIM:238700,SNOMED CT:58558003 Hyperlysinemia germline 7 122133533 ACAAGGTCTTGATACAGCCTTCGAATCGGCGGGCCATTCATGATAAGGTGAGTATTTCCAA 1057517651 359017 NM_006412.3(AGPAT2):c.194G>A (p.Trp65Ter) AGPAT2 Dec 08, 2016 MedGen:C1720862,OMIM:608594 Congenital generalized lipodystrophy type 1 germline 9 136677545 ATGGTGGCCTCCCCTGCAGCATCATCGGCTGGTTCGTGCGAAGCTTCAAGTACTTTTACGG 587777172 106763 NM_194442.2(LBR):c.1748G>A (p.Arg583Gln) LBR Feb 27, 2014 MedGen:C1300226,OMIM:215140,SNOMED CT:389261002 Greenberg dysplasia germline 1 225403403 TAATTTATTTCACCATGTTGCTTGTCCACCGAGAAGCTCGTGACGAGTACCACTGTAAGAA 180177355 78975 NM_017890.4(VPS13B):c.1563G>A (p.Lys521=) VPS13B - MedGen:CN517202 not provided germline 8 99135733 AGAATTTATCTTGGATTCAACTCATCATAAGGTTAGAGAATATATATTTGAACCAAATTCT 1064797092 413180 NM_016651.5(DACT1):c.1256G>A (p.Trp419Ter) DACT1 May 02, 2017 MedGen:CN243870,OMIM:617466 Townes-Brocks syndrome 2 germline 14 58645879 ACAATGGGACATTCTCCCCACCGAAGCAGTGGTCGAAAGAATCAAAGGCCGAACAAGCCGA 573432153 359555 NM_000094.3(COL7A1):c.6262G>A (p.Gly2088Arg) COL7A1 Sep 27, 2016 MedGen:CN517202 not provided germline 3 48575081 CCTGGACTCCCTGGAACCCCTGGGCCCCCCGGACCCCCTGGCCCCAAGGTGATCACCCCAT 267607065 16362 NM_001174089.1(SLC4A11):c.1147G>A (p.Glu383Lys) SLC4A11 Jul 01, 2006 MedGen:C2750450,OMIM:613268 Corneal dystrophy, Fuchs endothelial, 4 germline 20 3230954 CCCACCATCGCTTTCGGGTCTCTCAATGACGAGAACACAGACGGGGCCATCGGTGAGGGGC 1131692245 424418 NM_004646.3(NPHS1):c.2206G>A (p.Val736Met) NPHS1 Jan 06, 2017 MedGen:C0403399,OMIM:256300,Orphanet:ORPHA839,SNOMED CT:197601003 Finnish congenital nephrotic syndrome germline 19 35844109 GGCACCGCGGAAGCGCGGCTGCGGCTGGACGTGCACTGTGAGCCCCGCCCACCATGGAAAC 397515480 76971 NM_006397.2(RNASEH2A):c.69G>A (p.Val23=) RNASEH2A Nov 22, 2016 MedGen:C1835912,OMIM:610333 Aicardi Goutieres syndrome 4 germline 19 12806742 CTGTCGCCTGAGTTCGCCTGTGCCCGCGGTGTGCCGCAAGGAGCCTTGCGTCCTGGGCGTC 879254915 246175 NM_000527.4(LDLR):c.1470G>A (p.Trp490Ter) LDLR Mar 25, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11113646 TGTGGACTGGATCCACAGCAACATCTACTGGACCGACTCTGTCCTGGGCACTGTCTCTGTT 104886043 25504 NM_000495.4(COL4A5):c.161G>A (p.Gly54Asp) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive germline X 108559083 TTTAATTGCAGGGAGAGAGAGGGTTTCCAGGTTTGGAAGGACACCCAGGATTGCCTGGATT 765661521 360796 NM_000091.4(COL4A3):c.3955G>A (p.Gly1319Arg) COL4A3 - MedGen:C1567744,OMIM:203780,Orphanet:ORPHA88919 Alport syndrome, autosomal recessive germline 2 227303110 CCTGGATTCCAGGGGTTTCCAGGCGTGAAAGGTACTGTTTTTGTGCATTGCTCTTTATATG 534438354 150252 NM_003896.3(ST3GAL5):c.1063G>A (p.Glu355Lys) ST3GAL5 Jan 15, 2014 MedGen:C1836824,OMIM:609056,Orphanet:ORPHA171714 Amish infantile epilepsy syndrome germline 2 85840338 GCCGTTGTCTTAGCCACACATCTGTGCGATGAAGTCAGTTTGGCGGGTTTTGGATATGACC 150702945 200660 NM_138413.3(HOGA1):c.337G>A (p.Glu113Lys) HOGA1 Nov 27, 2014 MedGen:C3150878,OMIM:613616,Orphanet:ORPHA93600 Primary hyperoxaluria, type III germline 10 97598900 AACAGGCTCCTGCTAGCTGGCTCCGGATGCGAGTGTGAGCCAGAATGCCCTGGGCCCTGGG 587777558 150291 NM_018400.3(SCN3B):c.17G>A (p.Arg6Lys) SCN3B Mar 01, 2011 MedGen:CN220307 Atrial fibrillation, familial, 16 germline 11 123653785 GCCAGCCCCAGAAGATGCCTGCCTTCAATAGATTGTTTCCCCTGGCTTCTCTCGTGCTTAT 786205085 21915 NM_003816.2(ADAM9):c.1130+1G>A ADAM9 May 01, 2009 MedGen:C1423873,OMIM:612775 Cone-rod dystrophy 9 germline 8 39026811 AAAGAGCTGCATCATGAATTCAGGAGCATCGTGAGTACCTGGGTTCTTCTTCTCCTTTATT 150291837 214312 NM_001286577.1(C2CD3):c.5267G>A (p.Gly1756Glu) C2CD3 Feb 23, 2015 Human Phenotype Ontology:HP:0002335,MedGen:C0431399,Orphanet:ORPHA475,SNOMED CT:253175003,SNOMED CT:716997004 Joubert syndrome unknown 11 74049431 ACATCACAGACTTCAGTGGAGAGTGCCAGGGGCAGATAAAAGTTGCTGTCTCCCCTTTGGA 137852572 24858 NM_000044.4(AR):c.2324G>A (p.Arg775His) AR May 05, 2017 MedGen:C0039585,OMIM:300068,SNOMED CT:12313004 Androgen resistance syndrome germline X 67721838 TTTCCTCTGTGTATCTCCTTCCCAGGTACCGCATGCACAAGTCCCGGATGTACAGCCAGTG 746834464 245891 NM_000527.4(LDLR):c.949G>A (p.Glu317Lys) LDLR Mar 30, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11110660 TGCATCCCCTGGCCCTGCGCAGGGACCAACGAATGCTTGGACAACAACGGCGGCTGTTCCC 104893765 28653 NM_000306.3(POU1F1):c.515G>A (p.Arg172Gln) POU1F1 Sep 28, 2017 MedGen:C2751608,OMIM:613038;MedGen:CN517202 Pituitary hormone deficiency, combined 1;not provided germline 3 87262160 GCTCTGAATTCAGTCAAACAACAATCTGCCGATTTGAAAATCTGCAGCTCAGCTTTAAAAA 66851495 103193 NM_000531.5(OTC):c.717G>A (p.Glu239=) OTC - MedGen:CN517202 not provided unknown X 38408795 AACCAAGTTGGCAGAGCAGTATGCCAAAGAGGTATGCTCTTTACATGTAAAGCTATTATTG 121965082 26895 NM_000260.3(MYO7A):c.1797G>A (p.Met599Ile) MYO7A Jun 15, 2001 MedGen:C1838701,OMIM:600060;MedGen:C1848638 Deafness, autosomal recessive 2;Usher syndrome, type 1B germline 11 77166162 CAAGCAGATCTTCCAGGCCGATGTCGCCATGGTAAGCCGGGTGCGGTTTCTGTTGTTCGGG -1 439488 NM_001284214.1(TRIP12):c.3887+1G>A TRIP12 Nov 06, 2017 MedGen:CN593636,OMIM:617752 MENTAL RETARDATION, AUTOSOMAL DOMINANT 49 germline 2 229795178 TTTCCCTAGTGGAAATGGGACAGGAGGCAGGTAAGGACCATTGCCTGGCTATACCCTTGCC 28934575 27404 NM_000546.5(TP53):c.733G>A (p.Gly245Ser) TP53 Oct 02, 2017 MedGen:C0001418;Human Phenotype Ontology:HP:0030078,MeSH:C538231,MedGen:C0152013;MedGen:C0007112;MedGen:C0278701;MedGen:C0334579,Orphanet:ORPHA251589,SNOMED CT:55353007;MedGen:C1266184;Human Phenotype Ontology:HP:0010796,MedGen:C0677865;Human Phenotype Ontology:HP:0011459,MedGen:C0152018,Orphanet:ORPHA70482;MeSH:D015179,MedGen:CN236642;Human Phenotype Ontology:HP:0100843,MeSH:D005909,MedGen:C0017636,SNOMED CT:63634009;MedGen:C2239176,OMIM:114550,Orphanet:ORPHA88673,SNOMED CT:187769009,SNOMED CT:25370001;MedGen:C0027672,SNOMED CT:699346009;MedGen:C0085390,Orphanet:ORPHA524,SNOMED CT:428850001;Gene:553989,MedGen:C1835398,OMIM:151623;MedGen:C2675080;MeSH:D009369,MedGen:C0027651,SNOMED CT:108369006;Human Phenotype Ontology:HP:0030692,MeSH:D001932,MedGen:C0006118,SNOMED CT:126952004;Human Phenotype Ontology:HP:0100013,MeSH:D001943,MedGen:C1458155,Orphanet:ORPHA180250,SNOMED CT:126926005;MedGen:C0279663;Human Phenotype Ontology:HP:0006725,MedGen:C0281361;Human Phenotype Ontology:HP:0030359,MedGen:C0149782;MeSH:C535575,MedGen:C1168401,OMIM:275355,Orphanet:ORPHA67037;Human Phenotype Ontology:HP:0006740,MedGen:C0279680;MedGen:C0280630;MedGen:CN517202 Adenocarcinoma;Adenocarcinoma of lung;Adenocarcinoma of prostate;Adenocarcinoma of stomach;Astrocytoma, anaplastic;Atypical teratoid/rhabdoid tumor;Brainstem glioma;Carcinoma of esophagus;Colorectal Neoplasms;Glioblastoma;Hepatocellular carcinoma;Hereditary cancer-predisposing syndrome;Li-Fraumeni syndrome;Li-Fraumeni syndrome 1;Li-Fraumeni-like syndrome;Neoplasm;Neoplasm of brain;Neoplasm of the breast;Ovarian Serous Cystadenocarcinoma;Pancreatic adenocarcinoma;Squamous cell carcinoma of lung;Squamous cell carcinoma of the head and neck;Transitional cell carcinoma of the bladder;Uterine Carcinosarcoma;not provided germline;somatic;unknown 17 7674230 AACTACATGTGTAACAGTTCCTGCATGGGCGGCATGAACCGGAGGCCCATCCTCACCATCA 386134129 51218 NM_000096.3(CP):c.1874G>A (p.Gly625Glu) CP Apr 18, 2013 MedGen:C0878682,OMIM:604290,Orphanet:ORPHA48818,SNOMED CT:124224004 Deficiency of ferroxidase not provided 3 149186723 GTTATTTCCCAACTTTTACAGCCATGAATGGATTCATGTATGGGAATCAGCCGGGTCTCAC 119469013 18673 NM_000250.1(MPO):c.1501G>A (p.Gly501Ser) MPO Sep 21, 2007 MedGen:C0398595,OMIM:254600,Orphanet:ORPHA2587,SNOMED CT:129644003,SNOMED CT:234433009 Myeloperoxidase deficiency germline 17 58273534 GCCAACGTCTTCACCAATGCCTTCCGCTACGGCCACACCCTCATCCAACCCTTCATGTTCC 797045382 209283 NM_000052.6(ATP7A):c.3764G>A (p.Gly1255Glu) ATP7A Feb 08, 2013 MedGen:C0022716,OMIM:309400,Orphanet:ORPHA565,SNOMED CT:59178007 Menkes kinky-hair syndrome germline X 78040696 CTATGGGCTTAGAAGTAGTTCTGATGACTGGAGACAACAGTAAAACAGCTAGATCTATTGC 387906607 38594 NM_001849.3(COL6A2):c.1870G>A (p.Glu624Lys) COL6A2 Mar 26, 2010 MedGen:CN033863,OMIM:254090 Ullrich congenital muscular dystrophy 1 germline 21 46125518 CTGGACGTGGTCTTCGTCATCGACAGCTCCGAGAGCATTGGGTACACCAACTTCACACTGG 587779477 106979 NM_000090.3(COL3A1):c.1808G>A (p.Gly603Asp) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188997211 ATGGAGAACGAGGTGGCCCTGGAGGACCTGGCCCTCAGGTACGTAGCTTTCCTCAATTTAT -1 475259 NM_000314.6(PTEN):c.333G>A (p.Trp111Ter) PTEN Jun 01, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 10 87933092 CAAACCCTTTTGTGAAGATCTTGACCAATGGCTAAGTGAAGATGACAATCATGTTGCAGCA 879253952 244326 NM_000465.3(BARD1):c.1811-1G>A BARD1 Jun 09, 2015 MedGen:CN517202 not provided germline 2 214745160 TCTTTCTCTTACTGCTTTTTTTGTATTTTAGTAACTCATGTTGTTGTTCCTGGTGATGCAG 201227603 19648 NM_032383.4(HPS3):c.1163+1G>A HPS3 Feb 16, 2016 MedGen:C3888001,OMIM:614072 Hermansky-Pudlak syndrome 3 germline 3 149145547 CACGCCACAATTTTTGCACGTCATTACAAGGTACTGTTAGAGGGTCACTTGCTGGCCTGTG 1057519407 362437 NM_001197104.1(KMT2A):c.4696+1G>A KMT2A - MedGen:C1854630,OMIM:605130,Orphanet:ORPHA319182 Wiedemann-Steiner syndrome de novo 11 118490250 GTCATGATTGCGCCAAGCTCTTTGCTAAAGGTACCCAAAAAAGCCAGTTTTGCCAGCTTTC 1131692261 424470 NM_001005463.2(EBF3):c.626G>A (p.Arg209Gln) EBF3 Jul 20, 2017 MedGen:CN517202 not provided germline 10 129877778 TGAAGAATGCAGGCAACCCTCGAGATATGCGGAGATTCCAGGTATACATTTCTCAAAGACA 397516020 51885 NM_000256.3(MYBPC3):c.3490+1G>A MYBPC3 Sep 10, 2012 MedGen:C1861862,OMIM:115197;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005 Familial hypertrophic cardiomyopathy 4;Primary familial hypertrophic cardiomyopathy germline 11 47332813 CCAAGGAGCCCGTCTTTATCCCCAGACCAGGTGCTGTACCCTCATTCTTCCAACCAGGGGC 794726971 190723 NM_000155.3(GALT):c.905-1G>A GALT Mar 16, 2015 MedGen:C0268151,OMIM:230400,Orphanet:ORPHA79239,SNOMED CT:124354006 Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase germline 9 34649409 CTCTCCCCACTGTCTCTCTTCTTTCTGTCAGGGGCTCCCACAGGATCAGAGGCTGGGGCCA 121908029 18730 NM_000527.4(LDLR):c.682G>A (p.Glu228Lys) LDLR Mar 30, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline;unknown 19 11105588 GGTGGCCCCGACTGCAAGGACAAATCTGACGAGGAAAACTGCGGTATGGGCGGGGCCAGGG 144081869 17345 NM_005609.3(PYGM):c.2056G>A (p.Gly686Arg) PYGM Mar 01, 1998 MedGen:C0017924,OMIM:232600,Orphanet:ORPHA368,SNOMED CT:55912009 Glycogen storage disease, type V germline 11 64750497 GGCACCGGCAACATGAAGTTCATGCTCAACGGGGCTCTGACCATTGGCACCATGGACGGGG 121912860 32445 NM_000092.4(COL4A4):c.2690G>A (p.Gly897Glu) COL4A4 Sep 01, 1996 MedGen:C0241908,OMIM:141200,SNOMED CT:236421001 Benign familial hematuria germline 2 227055971 CAGGAATCCCAGGTCCCTTTGGAGATGATGGGCTACCTGGTCCTCCAGGTCCAAAGGGTAG 752281590 237580 NM_001168272.1(ITPR1):c.7615G>A (p.Gly2539Arg) ITPR1 Jul 20, 2016 MedGen:C0431401,OMIM:206700,Orphanet:ORPHA1065,SNOMED CT:253176002 Gillespie syndrome germline 3 4814521 GTCACTGTGCTGAGTCACGGGCTGCGGAGCGGGGGTGGAGTAGGAGATGTACTCAGGAAGC 587776775 27782 NM_004356.3(CD81):c.561+1G>A CD81 Apr 01, 2010 MedGen:C3150741,OMIM:613496 Common variable immunodeficiency 6 unknown 11 2395971 GGCAGCAACATCATCAGCAACCTCTTCAAGGTGCGCGAGGCCGGTGGGGCCGCGCCTGACC 121918221 16261 NM_006363.5(SEC23B):c.325G>A (p.Glu109Lys) SEC23B Nov 18, 2013 MedGen:C1306589,OMIM:224100,Orphanet:ORPHA98873,SNOMED CT:68870007;MedGen:CN517202 Congenital dyserythropoietic anemia, type II;not provided germline 20 18515695 GGAGGCATATCTGAGGTGAATCAACCTGCCGAATTGATGCCCCAGTTTTCTACAATTGAGT 886042021 265171 NM_001399.4(EDA):c.872G>A (p.Gly291Glu) EDA Oct 04, 2016 MedGen:CN517202 not provided germline X 70033476 CCAAGGTGTTTAAGCTACATCCCCGCAGCGGGGAGCTGGAGGTACTGGTGGACGGCACCTA 876657418 228230 NM_033056.3(PCDH15):c.158-1G>A PCDH15 May 19, 2016 MedGen:C1568247,OMIM:276900,Orphanet:ORPHA231169 Usher syndrome, type 1 germline 10 54378943 ATGTTTTCAAGTACCTTTCTTTGGTTTGCAGGTACAATTCTGGTGGACAACATGCTGATCA 121908980 21974 NM_001164277.1(SLC37A4):c.1016G>A (p.Gly339Asp) SLC37A4 Aug 01, 2000 MedGen:C0268146,OMIM:232220,SNOMED CT:30102006;MedGen:CN517202 Glucose-6-phosphate transport defect;not provided germline 11 119025298 TCTGGATCCTGGTATTGGGAGCTGTATTTGGTTTCTCCTCGTATGGCCCCATTGCCCTGTT 80358268 23518 NM_006432.3(NPC2):c.190+5G>A NPC2 Jul 22, 2008 MedGen:C1843366,OMIM:607625 Niemann-Pick disease type C2 germline 14 74486324 CAGCGTCAATGTCACCTTCACCAGCAGTGCGTAAAAGTGGCTCTTAACTCAAATTCATGTT 1057521070 375991 NM_001083962.1(TCF4):c.1727G>A (p.Arg576Gln) TCF4 Dec 19, 2016 MedGen:CN517202 not provided germline 18 55228999 AGAAGGAGCGGAGGATGGCCAACAATGCCCGAGAGCGTCTGCGGGTCCGTGACATCAACGA 113994139 33347 NM_139276.2(STAT3):c.1909G>A (p.Val637Met) STAT3 May 16, 2017 MedGen:CN204280,Orphanet:ORPHA331223;MedGen:C0022398,OMIM:147060,SNOMED CT:50926003;MedGen:CN517202 Hyper-IgE syndrome;Hyperimmunoglobulin E syndrome;not provided germline 17 42322474 CCTGTGACAGGTAAGACCCAGATCCAGTCCGTGGAACCATACACAAAGCAGCAGCTGAACA 121918666 27775 NM_198253.2(TERT):c.2594G>A (p.Arg865His) TERT Apr 27, 2015 MedGen:C1800706,OMIM:178500,Orphanet:ORPHA79126,SNOMED CT:28168000;MedGen:C3553617,OMIM:614742;MedGen:CN517202 Idiopathic fibrosing alveolitis, chronic form;Pulmonary fibrosis and/or bone marrow failure, telomere-related, 1;not provided germline 5 1266524 GTATTTTCCCTTATTTTAGGCTGCTCCTGCGTTTGGTGGATGATTTCTTGTTGGTGACACC 786205835 188700 NM_001037.4(SCN1B):c.449-1G>A SCN1B Jan 22, 2014 MedGen:CN517202 not provided germline 19 35039116 CTACCCCCTTAACCCTGCCTGGCCCCTGCAGCCAACAGAGACATGGCATCCATCGTGTCTG 201497300 186890 NM_000053.3(ATP7B):c.3007G>A (p.Ala1003Thr) ATP7B Jun 19, 2017 Human Phenotype Ontology:HP:0200134,MedGen:C0543888;MedGen:C0019202,OMIM:277900,Orphanet:ORPHA905,SNOMED CT:88518009 Epileptic encephalopathy;Wilson disease germline;unknown 13 51946337 ACGGCTGTCATGGTGGGCACCGGGGTGGCCGCGCAGAACGGCATCCTCATCAAGGGAGGCA 145360423 415113 NM_000265.5(NCF1):c.579G>A (p.Trp193Ter) NCF1 Oct 31, 2016 MedGen:CN517202 not provided germline 7 74783529 GTCACATTCCCGCACCTCTGGCACAGGTTGGTGGTTCTGTCAGATGAAAGCAAAGCGAGGC -1 480738 NM_001791.3(CDC42):c.511G>A (p.Glu171Lys) CDC42 Nov 01, 2017 MedGen:CN239316 Noonan-Like Syndrome Disorder germline 1 22091452 TTTCAGAAAGGCCTAAAGAATGTATTTGACGAAGCAATATTGGCTGCCCTGGAGCCTCCAG 727503260 175624 NM_000257.3(MYH7):c.2302G>A (p.Gly768Arg) MYH7 Aug 01, 2017 Human Phenotype Ontology:HP:0001638,MedGen:C0878544,Orphanet:ORPHA167848,SNOMED CT:85898001;MedGen:C3495498,OMIM:192600;Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569;MedGen:CN517202 Cardiomyopathy;Familial hypertrophic cardiomyopathy 1;Hypertrophic cardiomyopathy;not provided germline 14 23425403 ACACCTTGCCTGCAGGTGTTCTTCAAGGCCGGGCTGCTGGGGCTGCTGGAGGAAATGAGGG 397508111 67715 NM_000218.2(KCNQ1):c.477+5G>A KCNQ1 Jun 12, 2017 MeSH:D008133,MedGen:C0023976,SNOMED CT:9651007;MedGen:CN517202;MedGen:CN169374 Long QT syndrome;not provided;not specified germline 11 2528023 TGGCCACGGGGACTCTCTTCTGGATGGTACGTAGCATCTGAGGGCATGGCTGGATGTCATG 67707918 413957 NM_000089.3(COL1A2):c.1171G>A (p.Gly391Ser) COL1A2 - MedGen:C0268363,OMIM:166220,Orphanet:ORPHA216820,SNOMED CT:205497004 Osteogenesis imperfecta with normal sclerae, dominant form paternal 7 94410501 AGAGGCCCTAATGGGGAAGCTGGATCTGCCGGCCCTCCAGGACCTCCTGGGCTGAGAGTAG 121908765 68447 NM_000492.3(CFTR):c.3612G>A (p.Trp1204Ter) CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008;MedGen:C0238339,OMIM:167800,Orphanet:ORPHA676,SNOMED CT:68072000 Cystic fibrosis;Hereditary pancreatitis germline;unknown 7 117627665 GAATTCACACGTGAAGAAAGATGACATCTGGCCCTCAGGGGGCCAAATGACTGTCAAAGAT -1 431959 NM_000527.4(LDLR):c.1988-1G>A LDLR Mar 01, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline;not applicable 19 11120369 TCCTGCCCTGACTCCGCTTCTTCTGCCCCAGGAGTGAACTGGTGTGAGAGGACCACCCTGA 281865036 46985 NM_024312.4(GNPTAB):c.3434+1G>A GNPTAB May 10, 2012 MedGen:C2673377,OMIM:252500,Orphanet:ORPHA576 I cell disease not provided 12 101757211 CCAGTTGGATGACATAAGAAAAAACCCTAGGTACTGATTTTTATATATAATTTTTAATTAT 1057518915 361063 NM_153638.3(PANK2):c.894G>A (p.Met298Ile) PANK2 Apr 01, 2015 Human Phenotype Ontology:HP:0002180,MedGen:C0027746 Neurodegeneration unknown 20 3908191 CACTCATGACATGCCTGCTTTTATTCAAATGGGCAGAGATAAAAACTTCTCGAGTCTCCAC 121918116 31634 NM_000121.3(EPOR):c.1317G>A (p.Trp439Ter) EPOR Jun 28, 2016 MedGen:C1851490,OMIM:133100 Familial erythrocytosis, 1 germline 19 11378194 GGACCCCAGCTCCCAGCTCTTGCGTCCATGGACACTGTGCCCTGAGCTGCCCCCTACCCCA 1057520504 372864 NM_000545.6(HNF1A):c.788G>A (p.Arg263His) HNF1A Apr 01, 2015 MedGen:CN517202 not provided germline 12 120994238 GGCTGGGCTCCAACCTCGTCACGGAGGTGCGTGTCTACAACTGGTTTGCCAACCGGCGCAA -1 444182 NM_000089.3(COL1A2):c.1316G>A (p.Gly439Asp) COL1A2 Aug 08, 2017 MedGen:CN517202 not provided germline 7 94411120 CTGGAGTCCGAGGACCTAATGGAGATGCTGGTCGCCCTGGGGAGCCTGGTCTCATGGGACC 267606923 15218 NM_000274.3(OAT):c.533G>A (p.Trp178Ter) OAT Jan 29, 1993 Human Phenotype Ontology:HP:0012026,MedGen:C0599035,OMIM:258870,SNOMED CT:276426004 Ornithine aminotransferase deficiency germline 10 124405551 TTTGTTTCCCCTTTGTAGCTGGGAACTTCTGGGGTAGGACGTTGTCTGCTATCTCCAGTTC 137852274 25682 NM_000133.3(F9):c.328G>A (p.Asp110Asn) F9 Oct 09, 2017 MedGen:C0008533,OMIM:306900,Orphanet:ORPHA98879,SNOMED CT:41788008 Hereditary factor IX deficiency disease germline X 139541126 AATCCATGTTTAAATGGCGGCAGTTGCAAGGATGACATTAATTCCTATGAATGTTGGTGTC 398122929 48505 NM_001291415.1(KDM6A):c.3873G>A (p.Trp1291Ter) KDM6A Feb 15, 2013 MedGen:C3275495,OMIM:300867 Kabuki syndrome 2 germline X 45089911 GGCTATTGGCTGGTGCAACAACATTGCTTGGAATGTTGGTCCACTTACAGGTATTATAAAG 786205860 189177 NM_001282684.1(KCTD17):c.434G>A (p.Arg145His) KCTD17 May 12, 2015 MedGen:C4225341,OMIM:616398 Dystonia 26, myoclonic germline 22 37057420 GCCCACAGGTCCCACCCAAGCACGTGTACCGCGTGCTGCAGTGCCAGGAGGAGGAGCTCAC 104894407 169013 NM_004004.5(GJB2):c.132G>A (p.Trp44Ter) GJB2 Feb 08, 2013 Human Phenotype Ontology:HP:0000365,MedGen:C0018772 Hearing impairment germline 13 20189450 GATCCTCGTTGTGGCTGCAAAGGAGGTGTGGGGAGATGAGCAGGCCGACTTTGTCTGCAAC 1114167533 419797 NM_130799.2(MEN1):c.1269G>A (p.Trp423Ter) MEN1 Jun 06, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 11 64805115 GCTGCGATTCTACGACGGCATCTGCAAATGGGAGGAGGGCAGTCCCACGCCTGTGCTGCAT 121913679 28882 NM_000222.2(KIT):c.1990G>A (p.Gly664Arg) KIT Feb 01, 1992 Human Phenotype Ontology:HP:0007443,MedGen:C0080024,OMIM:172800,Orphanet:ORPHA2884,SNOMED CT:6479008 Partial albinism germline 4 54728121 GTGAATCTACTTGGAGCCTGCACCATTGGAGGTAAAGCCGTGTCCAAGCTGCCTTTTATTG 68031618 26032 NM_000531.5(OTC):c.77G>A (p.Arg26Gln) OTC Jan 26, 2017 MedGen:C0268542,OMIM:311250,Orphanet:ORPHA664,SNOMED CT:80908008;MedGen:CN517202 Ornithine carbamoyltransferase deficiency;not provided germline;unknown X 38352773 ATGGTCACAACTTCATGGTTCGAAATTTTCGGTAAGTGATGGTCAGAGACTTGGGTTTGAT 587777570 150453 NM_004522.2(KIF5C):c.709G>A (p.Glu237Lys) KIF5C Nov 23, 2017 MedGen:C3809013,OMIM:615282;MedGen:CN517202 Cortical dysplasia, complex, with other brain malformations 2;not provided de novo;germline 2 148947018 AAACTTTATTTGGTTGATTTGGCTGGGAGCGAAAAGGTAATTTGTTCTTTATTTGTATTAT -1 479239 NM_032043.2(BRIP1):c.1004G>A (p.Trp335Ter) BRIP1 Aug 21, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 17 61801389 TACAGACTTTCCAAGGGATGTGCAAAGCCTGGGATATAGAAGAACTTGTCAGCCTGGGGAA -1 445814 NM_000088.3(COL1A1):c.2138G>A (p.Gly713Asp) COL1A1 Oct 04, 2017 MedGen:CN517202 not provided germline 17 50191480 TCTTCTTGGTTGTCACATAGGGTGATGCTGGTGCCCCTGGAGCTCCCGGTAGCCAGGGCGC 1060503092 396584 NM_006096.3(NDRG1):c.205+1G>A NDRG1 Jul 25, 2017 MedGen:CN043578 Charcot-Marie-Tooth disease, type IV germline 8 133264546 TCCTCACCTACCATGACATCGGCATGAACCGTAAGTTCTGAGGAGCTCTGATTCCCTGTCA 387907300 45818 NM_032806.5(POMGNT2):c.473G>A (p.Arg158His) POMGNT2 Dec 01, 2014 MedGen:C3553813,OMIM:614830;Human Phenotype Ontology:HP:0003811,MedGen:C0410916;Human Phenotype Ontology:HP:0006882,MedGen:C3278123 Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type a, 8;Neonatal death;Severe hydrocephalus germline 3 43080959 TCGTGCCAGACGTGGCCCTCATCGCCAACCGCTTCAACCCCGACAACCTCATGCACGTCTT 1064794273 409860 NM_000267.3(NF1):c.801G>A (p.Trp267Ter) NF1 Mar 14, 2017 MedGen:CN517202 not provided germline 17 31182578 TGAAAGCACCAAACGTAAAGCAGCAGTTTGGCCACTACAAATCATTCTCCTTATCTTGTGT 1064794026 408678 NM_003482.3(KMT2D):c.4148G>A (p.Cys1383Tyr) KMT2D Aug 03, 2015 MedGen:CN517202 not provided germline 12 49048053 CTGTGTTTCCCCAGGACATGTGTGTGGTATGTGGCAGCTTTGGCCGGGGGGCAGAGGGCCA 878853133 237489 NM_052867.3(NALCN):c.979G>A (p.Glu327Lys) NALCN May 19, 2015 MedGen:C4225398,OMIM:616266 Congenital contractures of the limbs and face, hypotonia, and developmental delay de novo 13 101292058 TTTATTGCTGTTATCATTGAAACATTTGCAGAAATCAGAGTACAGTTTCAACAAATGTGGG 57794451 426944 NM_001171.5(ABCC6):c.2306G>A (p.Arg769Lys) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16178907 AGCGGCTGAGCCTGGCCCGGGCTGTATACAGAAAGGCAGCTGTGTACCTGCTGGATGACCC 764085684 263793 NM_005993.4(TBCD):c.1130G>A (p.Arg377Gln) TBCD Nov 16, 2016 MedGen:C4310671,OMIM:617193 Encephalopathy, progressive, early-onset, with brain atrophy and thin corpus callosum germline 17 82807650 TCGGGCTGAAGGACAAGGACACGGTCGTGCGGTGGTCTGCAGCCAAGGGGTAGGTGTCTGT 864309532 215102 NM_001015877.1(PHF6):c.418G>A (p.Ala140Thr) PHF6 Dec 15, 2015 MedGen:C0265339,OMIM:301900,SNOMED CT:21634003 Borjeson-Forssman-Lehmann syndrome de novo X 134393952 AAACACAAGAAAACTGCACATAACTCCGAAGGTACATCATTTAGCCACGTTTCAGCCACTT 267606898 24742 m.13042G>A MT-ND5 Apr 01, 2007 MedGen:C0162671,OMIM:540000,Orphanet:ORPHA550,SNOMED CT:39925003;MedGen:C1838951;MedGen:C0162672,OMIM:545000,Orphanet:ORPHA551 Juvenile myopathy, encephalopathy, lactic acidosis AND stroke;Leigh syndrome due to mitochondrial complex I deficiency;Myoclonus with epilepsy with ragged red fibers germline MT 13042 CAATTAGGTCTCCACCCCTGACTCCCCTCAGCCATAGAAGGCCCCACCCCAGTCTCAGCCC 1057519565 362364 NM_021008.3(DEAF1):c.634G>A (p.Gly212Ser) DEAF1 May 12, 2017 MedGen:C4014414,OMIM:615828;MedGen:CN517202 Mental retardation, autosomal dominant 24;not provided de novo;germline 11 687941 GAGCTGCCCGTACGGTGCCGGAACATCAGCGGCACTCTGTACAAGAACAGGCTCGGCTCAG 72552296 103081 NM_000531.5(OTC):c.3G>A (p.Met1Ile) OTC - MedGen:CN517202 not provided unknown X 38352699 GAATCGTCCTTTACACAATTAAAAGAAGATGCTGTTTAATCTGAGGATCCTGTTAAACAAT 545215807 200323 NM_000018.3(ACADVL):c.553G>A (p.Gly185Ser) ACADVL Mar 22, 2017 MedGen:C3887523,OMIM:201475,Orphanet:ORPHA26793,SNOMED CT:237996001,SNOMED CT:237997005;MedGen:CN517202 Very long chain acyl-CoA dehydrogenase deficiency;not provided germline;unknown 17 7221613 GGCATTACCCTGGGGGCCCATCAGAGCATCGGTTTCAAAGGCATCCTGCTCTTTGGCACAA 367543062 40177 NM_023073.3(CPLANE1):c.7400+1G>A CPLANE1 May 31, 2013 MedGen:C3553264,OMIM:614615 Joubert syndrome 17 germline 5 37167046 AGTAAGACAAGGAAAGGACAGTAAAAAAAGGCAAGGCTTAAGTGAAATTTTATTTGATAAT 587779459 107039 NM_000090.3(COL3A1):c.1194+1G>A (p.Gly384_Met398del) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188994083 AATGGTAGTCCTGGTGGTAAAGGCGAAATGGTAAGCTGTCCCCACTCCTCAGCCTTATCTC 199473083 78939 NM_198056.2(SCN5A):c.845G>A (p.Arg282His) SCN5A Apr 10, 2014 MedGen:C1142166,Orphanet:ORPHA130,SNOMED CT:418818005;MedGen:CN029323,OMIM:601144 Brugada syndrome;Brugada syndrome 1 germline 3 38609823 TCATGGGCAACCTAAGGCACAAGTGCGTGCGCAACTTCACAGCGCTCAACGGCACCAACGG 59190510 34026 NM_000424.3(KRT5):c.1429G>A (p.Glu477Lys) KRT5 Sep 01, 2011 MedGen:C0079295,OMIM:131760,Orphanet:ORPHA79396;MedGen:CN517202 Epidermolysis bullosa herpetiformis, Dowling-Meara;not provided not provided 12 52516647 ATCGCCACTTACCGCAAGCTGCTGGAGGGCGAGGAATGCAGGTGAGTAGACAGCATGAACT 1131692281 424509 NM_016203.3(PRKAG2):c.547G>A (p.Glu183Lys) PRKAG2 Jan 14, 2016 MedGen:C0043202,OMIM:194200,Orphanet:ORPHA907,SNOMED CT:74390002 Wolff-Parkinson-White pattern maternal 7 151675557 CACACGTTTCCCCTGGAATCCTATAAGCACGAGCCTGAACGGTTAGAGAATCGCATCTATG 118203887 24614 m.622G>A MT-TF Jun 01, 2006 MedGen:C4016623 Myopathy, mitochondrial, late-onset germline MT 622 CTCCTCAAAGCAATACACTGAAAATGTTTAGACGGGCTCACATCACCCCATAAACAAATAG 587779545 106995 NM_000090.3(COL3A1):c.3140G>A (p.Gly1047Asp) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189006391 ATGGCTCTCCTGGTGCCCCTGGCGCTCCTGGTCATCCAGGCCCACCTGGTCCTGTCGGTCC 373297713 26929 NM_000128.3(F11):c.1716+1G>A F11 Oct 23, 2015 MedGen:C0015523,OMIM:612416,Orphanet:ORPHA329,SNOMED CT:49762007 Hereditary factor XI deficiency disease germline;unknown 4 186287824 TACAGGGAAGGAGGGAAGGACGCTTGCAAGGTAACAGAGTGTTCTTAGCCAATGGAATATA 6025 15681 NM_000130.4(F5):c.1601G>A (p.Arg534Gln) F5 Jul 14, 2017 na;MedGen:C0015499,OMIM:227400,Orphanet:ORPHA326,SNOMED CT:4320005;na;MedGen:C0000809,OMIM:614389,SNOMED CT:102878001;MedGen:C1861171,OMIM:188055;MedGen:C2674152 Budd-Chiari syndrome, susceptibility to;Factor V deficiency;Ischemic stroke, susceptibility to;Recurrent abortion;Thrombophilia due to activated protein C resistance;Thrombophilia due to factor V Leiden germline 1 169549811 TAATCTGTAAGAGCAGATCCCTGGACAGGCGAGGAATACAGGTATTTTGTCCTTGAAGTAA 79833450 20645 NM_012144.3(DNAI1):c.1543G>A (p.Gly515Ser) DNAI1 Nov 26, 2016 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244;MedGen:C0022521,OMIM:244400,Orphanet:ORPHA98861,SNOMED CT:42402006 Ciliary dyskinesia;Kartagener syndrome germline 9 34513165 CACAAAGAGATTGACTACATGTTCCTAGTGGGCACAGAGGAGGGAAAAATCTACAAGGTGA 281874717 35993 NM_000495.4(COL4A5):c.3587G>A (p.Gly1196Glu) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108667166 AACCAGGCTTTGGAAACCCAGGACCCCCTGGACTTCCAGGACTTTCTGGTAAACCTTAATA 797045942 206877 NM_021007.2(SCN2A):c.2567G>A (p.Arg856Gln) SCN2A Oct 19, 2015 Human Phenotype Ontology:HP:0001250,MedGen:C0036572;MedGen:CN517202 Seizures;not provided germline 2 165344559 AACACTGTTCTTGCTTTTATTTCCAGCTCCGAGTTTTCAAGTTGGCAAAATCTTGGCCAAC 62638202 20882 NM_000843.3(GRM6):c.448G>A (p.Gly150Ser) GRM6 Mar 29, 2005 MedGen:C1850362,OMIM:257270;MedGen:CN517202 Congenital stationary night blindness, type 1B;not provided germline 5 178994497 GCGCCCCCCGAGCGCGTCGTGGCCGTCGTGGGCGCCTCGGCCAGCTCCGTCTCCATCATGG 762162799 367608 NM_000094.3(COL7A1):c.6082G>A (p.Gly2028Arg) COL7A1 Oct 30, 2017 MedGen:CN517202 not provided germline 3 48575437 GGTCTGGCCCTTGGGGAGAGGGGCCCCCCCGGGCCTTCCGGCCTTGCCGGGGAGCCTGGAA 387906647 38738 NM_001242957.2(MAK):c.37G>A (p.Gly13Ser) MAK Aug 12, 2011 MedGen:C3280042,OMIM:614181 Retinitis pigmentosa 62 germline 6 10830612 CGATACACAACCATGAGACAGTTGGGGGACGGCACGTATGGGAGTGTGCTTATGGGCAAGA 747855862 233910 NM_000051.3(ATM):c.332-1G>A ATM Mar 30, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline 11 108235669 TGTTTTTCTTTATTTGTTTATTTTGAAATAGGAGCACCTAGGCTAAAATGTCAAGAACTCT 267606850 26734 NM_004484.3(GPC3):c.1666G>A (p.Gly556Arg) GPC3 Mar 01, 2009 MedGen:C0796154,OMIM:312870,Orphanet:ORPHA373,SNOMED CT:439143004 Simpson-Golabi-Behmel syndrome germline X 133536201 GACAACGAGATAAGCACCTTTCACAACCTCGGGAACGTTCATTCCCCGCTGAAGCTTCTCA 1064793887 410130 NM_032043.2(BRIP1):c.2258-1G>A BRIP1 Jul 20, 2015 MedGen:CN517202 not provided germline 17 61743135 ATTTTGGATATGCTTTTTTCTGTTGTTTAAGATGGAGCTCTCCTGGTAGCAGTTTGTCGTG 60554162 29675 NM_005554.3(KRT6A):c.1414G>A (p.Glu472Lys) KRT6A May 11, 2017 MedGen:C3714948,OMIM:615726;MedGen:CN517202 Pachyonychia congenita 3;not provided germline 12 52488338 ATCGCCACCTACCGCAAGCTGCTGGAGGGTGAGGAGTGCAGGTGGGTAACTGACACGAACT 879253836 224637 NM_000255.3(MUT):c.927G>A (p.Trp309Ter) MUT - MedGen:C1855114,OMIM:251000 Methylmalonic aciduria due to methylmalonyl-CoA mutase deficiency germline 6 49453741 ACGTTACTATTTTAGGTTGTCTTTCTTCTGGGGAATTGGAATGAATTTCTATATGGAAATA 312262797 49688 NM_024408.3(NOTCH2):c.5858G>A (p.Arg1953His) NOTCH2 Feb 28, 2013 MedGen:C1857761,OMIM:610205,Orphanet:ORPHA261629 Alagille syndrome 2 not provided 1 119918477 ATGGTACTACACCCCTGATCCTGGCTGCCCGCCTGGCTGTGGAGGGAATGGTGGCAGAACT 869312946 226924 NM_000019.3(ACAT1):c.757G>A (p.Asp253Asn) ACAT1 Oct 04, 2012 MeSH:D030342,MedGen:C0950123 Inborn genetic diseases germline 11 108141631 TTAGGTCAACCAGATGTAGTGGTGAAAGAAGATGAAGAATATAAACGTGTTGATTTTAGCA 281875211 76657 NM_080669.5(SLC46A1):c.1127G>A (p.Arg376Gln) SLC46A1 Dec 08, 2011 MedGen:C0342705,OMIM:229050,Orphanet:ORPHA90045,SNOMED CT:62578003;MedGen:CN517202 Congenital defect of folate absorption;not provided not provided 17 28402276 TCCTGTCATTAGTCATCACACCTGTCATCCGGGCTAAACTCTCCAAGCTGGTGAGAGAGAC 398123960 100530 NM_004006.2(DMD):c.4518+5G>A DMD Jun 19, 2017 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Duchenne muscular dystrophy germline X 32389496 TACAGTCACAGCTAAATCATTGTGTGGTATGTATTTCTGGTGGCAAATACGCAGGTACCCC 149459910 361175 NM_004826.3(ECEL1):c.1470G>A (p.Trp490Ter) ECEL1 Sep 29, 2014 MedGen:C3554415,OMIM:615065,Orphanet:ORPHA329457 Arthrogryposis, distal, type 5d germline 2 232483452 CCTGGGCCAGCGCCTGGAGGAGCTGGACTGGATGGACGCCGAGACCAGGGCTGCTGCTCGG -1 488084 NM_005458.7(GABBR2):c.2119G>A (p.Ala707Thr) GABBR2 Mar 15, 2018 MedGen:CN870852,OMIM:617903 NEURODEVELOPMENTAL DISORDER WITH POOR LANGUAGE AND LOSS OF HAND SKILLS germline 9 98306231 TACAACGTGGGGATCATGTGCATCATCGGGGCCGCTGTCTCCTTCCTGACCCGGGACCAGC 371526758 259687 NM_022787.3(NMNAT1):c.507G>A (p.Trp169Ter) NMNAT1 Mar 15, 2017 MedGen:CN517202 not provided germline 1 9982368 ATTGGAGTCCTTTGCTGTTCCCAATTTGTGGAAGAGTGAAGACATCACCCAAATCGTGGCC 121913671 28923 NM_001127500.2(MET):c.3736G>A (p.Asp1246Asn) MET May 13, 2016 Human Phenotype Ontology:HP:0030731,MeSH:D002277,MedGen:C0007097;Human Phenotype Ontology:HP:0005584,MeSH:D002292,MedGen:C0007134,OMIM:605074,Orphanet:ORPHA217071,SNOMED CT:41607009 Carcinoma;Renal cell carcinoma, papillary, 1 germline;somatic 7 116783353 GTCAAGGTTGCTGATTTTGGTCTTGCCAGAGACATGTATGATAAAGAATACTATAGTGTAC 587777182 106806 NM_006702.4(PNPLA6):c.3184G>A (p.Val1062Met) PNPLA6 Mar 04, 2014 MedGen:C1859093,OMIM:215470,Orphanet:ORPHA1180 Boucher Neuhauser syndrome germline 19 7557185 TCCCACCGCGCAGGCTCCCTGTGGCGGTACGTGCGCGCCAGCATGACGCTGTCGGGCTACC 368529673 259770 NM_000094.3(COL7A1):c.7865G>A (p.Arg2622Gln) COL7A1 Mar 30, 2015 MedGen:CN517202 not provided germline 3 48568100 AAAAAGGAGATGTTGGCTTCATGGGTCCCCGGGGCCTCAAGGTAGGAAAGAAACAAGATTG 869320618 38830 NM_000539.3(RHO):c.482G>A (p.Trp161Ter) RHO Mar 01, 2011 MedGen:C4016366 Retinitis pigmentosa 4, autosomal recessive germline 3 129530996 ACCATGCCATCATGGGCGTTGCCTTCACCTGGGTCATGGCGCTGGCCTGCGCCGCACCCCC 138000380 171738 NM_018075.4(ANO10):c.1843G>A (p.Asp615Asn) ANO10 Feb 01, 2017 MedGen:C3150998,OMIM:613728,Orphanet:ORPHA284289 Spinocerebellar ataxia, autosomal recessive 10 germline 3 43432682 TTAAAGTTTATACTTGCATTTGCCATACCTGATAAGCCACGGCATATCCAGATGAAACTAG 104894335 32874 NM_000486.5(AQP2):c.523G>A (p.Gly175Arg) AQP2 Sep 01, 1998 MedGen:C4015884 Diabetes insipidus, nephrogenic, autosomal recessive germline 12 49954317 GGCTTCTCTGTGGCCCTGGGCCACCTCCTTGGGGTAGGTCATGGCCATGGGTTCCAGCCTC -1 443770 NM_016222.3(DDX41):c.572-1G>A DDX41 Jun 29, 2017 MedGen:CN517202 not provided germline 5 177515259 TCATGAAGACGATGTCGGTTGGTTTTCATAGCCATCCTGAGAGGCCTGAAGAAGAAAGGCA 1064796636 409265 NM_000138.4(FBN1):c.6037+1G>A FBN1 Mar 01, 2017 MedGen:CN517202 not provided germline 15 48444540 GATACAGTCTTCAAAATGAGAAGTGTGAAGGTAGGAAAGCTATCAGTTGTAGCAAATGAGG 267606991 16639 NM_030916.2(NECTIN4):c.851G>A (p.Arg284Gln) NECTIN4 Aug 13, 2010 MedGen:C3150807,OMIM:613573,Orphanet:ORPHA247820 Ectodermal dysplasia-syndactyly syndrome 1 germline 1 161076355 GGCAGCCCCCTCCCTCATACAACTGGACACGGTAAGGGCCCGAGCCTGAGGAAGGCCTAAC 28934610 26889 NM_000260.3(MYO7A):c.635G>A (p.Arg212His) MYO7A May 17, 2011 MedGen:C1568247,OMIM:276900,Orphanet:ORPHA231169;MedGen:C1848638 Usher syndrome, type 1;Usher syndrome, type 1B germline 11 77156904 CCAAGACCATCCGCAATGACAACTCAAGCCGTTTCGGAAAGTACATCGACATCCACTTCAA 121918180 15943 NM_000181.3(GUSB):c.1338G>A (p.Trp446Ter) GUSB Jan 01, 1998 MedGen:C0085132,OMIM:253220,Orphanet:ORPHA584 Mucopolysaccharidosis type VII germline 7 65974348 GGACAAGAACCACCCCGCGGTCGTGATGTGGTCTGTGGCCAACGAGCCTGCGTCCCACCTA 777759523 17038 NM_199242.2(UNC13D):c.1389+1G>A UNC13D Mar 03, 2017 MedGen:C0272199,SNOMED CT:398250003;MedGen:C1837174,OMIM:608898;MedGen:CN517202 Familial hemophagocytic lymphohistiocytosis;Hemophagocytic lymphohistiocytosis, familial, 3;not provided germline 17 75836338 TTGCCCCAGCTGGTGACTGAGGCCCTGCAGGTATGGTACTCGCGCTGGGGATGGGGGAGAC 121918508 28335 NM_000141.4(FGFR2):c.1942G>A (p.Ala648Thr) FGFR2 Apr 01, 2006 MedGen:C0265269,OMIM:149730,SNOMED CT:23817003 Levy-Hollister syndrome germline 10 121488035 AATGTGATGAAAATAGCAGACTTTGGACTCGCCAGAGATATCAACAATATAGACTATTACA 104886280 36072 NM_000495.4(COL4A5):c.4351G>A (p.Gly1451Ser) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108687535 CCTGGTCCAGATGGATTGCAAGGTCCCCCAGGTCCCCCTGGAACCTCCTCTGTTGCACATG -1 446863 NM_138615.2(DHX30):c.2342G>A (p.Gly781Asp) DHX30 Dec 18, 2017 MedGen:CN703736,OMIM:617804 NEURODEVELOPMENTAL DISORDER WITH SEVERE MOTOR IMPAIRMENT AND ABSENT LANGUAGE germline 3 47848235 TATCAAGAGCCAATGTGATCCAGCGCCGGGGCCGGGCGGGCCGCTGCCAGTCCGGCTTTGC 796052924 201115 NM_000310.3(PPT1):c.362+5G>A PPT1 Jul 19, 2013 MedGen:CN517202 not provided germline 1 40092040 GGATTCTCCCAGGGAGGCCAATTTCTGTACGTTCCTTTTTGTTATATTGTACCACTTATAT 368027306 187219 NM_001146077.1(CLDN14):c.242G>A (p.Arg81His) CLDN14 Feb 01, 2012 MedGen:C3279660,OMIM:614035 Deafness, autosomal recessive 29 germline 21 36461454 TGGCGCTGCCCCAAGACCTCCAGGCTGCCCGCGCCCTCATGGTCATCTCCTGCCTGCTCTC 28933369 28918 NM_001005862.2(ERBB2):c.2236G>A (p.Gly746Ser) ERBB2 May 13, 2016 MedGen:C0278701;MeSH:D009369,MedGen:C0027651,SNOMED CT:108369006;Human Phenotype Ontology:HP:0006753,MeSH:D013274,MedGen:C0038356,OMIM:613659,SNOMED CT:126824007 Adenocarcinoma of stomach;Neoplasm;Neoplasm of stomach somatic 17 39724744 CCTTGTCCCCAGGAAGCATACGTGATGGCTGGTGTGGGCTCCCCATATGTCTCCCGCCTTC 397514555 48257 NM_000834.4(GRIN2B):c.1367G>A (p.Cys456Tyr) GRIN2B Feb 12, 2013 MedGen:C3151411,OMIM:613970 Mental retardation, autosomal dominant 6 germline 12 13615626 CAGACGAGGAGCCGGGTTACATCAAAAAATGCTGCAAGGGGTTCTGTATTGACATCCTTAA 28931578 32913 NM_000041.3(APOE):c.455G>A (p.Arg152Gln) APOE Feb 21, 2017 na APOE2 VARIANT germline 19 44908751 CCATGCTCGGCCAGAGCACCGAGGAGCTGCGGGTGCGCCTCGCCTCCCACCTGCGCAAGCT 41417548 30695 NM_000517.4(HBA2):c.314G>A (p.Cys105Tyr) HBA2 Mar 28, 2013 na;MedGen:CN077787 HEMOGLOBIN SALLANCHES;Hemoglobin H disease, nondeletional germline 16 173485 CCCTCTTCTCTGCACAGCTCCTAAGCCACTGCCTGCTGGTGACCCTGGCCGCCCACCTCCC 751292948 429067 NM_000124.3(ERCC6):c.2058G>A (p.Trp686Ter) ERCC6 Oct 29, 2015 MedGen:C0751038,OMIM:133540,Orphanet:ORPHA90322 Cockayne syndrome B germline 10 49482798 ACCGATGCAAAATAACCTCCGAGAGCTGTGGTCGCTCTTTGACTTCATCTTCCCGGGAAAG 121912976 31954 NM_000941.2(POR):c.1615G>A (p.Gly539Arg) POR Sep 01, 2008 MedGen:C1860042,OMIM:201750;MedGen:C2673964,OMIM:613571 Antley-Bixler syndrome with genital anomalies and disordered steroidogenesis;Disordered steroidogenesis due to cytochrome p450 oxidoreductase deficiency germline 7 75985795 ACGCCTGTCATCATGGTGGGCCCCGGCACCGGGGTGGCACCCTTCATAGGCTTCATCCAGG 779823931 361771 NM_033068.2(ACP4):c.397G>A (p.Glu133Lys) ACP4 Jan 18, 2017 MedGen:C4310630,OMIM:617297 Amelogenesis imperfecta, type IJ germline 19 50791749 CTGTTTCCCGAGGCTGCTCCAGGGAGCCCCGAGGCCCGCTGGAGGCCGATCCCGGTGCACA 119103259 17352 NM_005609.3(PYGM):c.1827G>A (p.Lys609=) PYGM Sep 20, 2016 MedGen:C0017924,OMIM:232600,Orphanet:ORPHA368,SNOMED CT:55912009 Glycogen storage disease, type V germline;unknown 11 64751597 TGTGCCTCGGACTGTGATGATTGGAGGGAAGGTGAGAAGCCAGGCTCCAGCCCTGGGCTCC 794726842 187787 NM_001165963.1(SCN1A):c.2936G>A (p.Gly979Glu) SCN1A Dec 20, 2014 MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002 Severe myoclonic epilepsy in infancy de novo 2 166037786 TTACTGTCTTCATGATGGTCATGGTGATTGGAAACCTAGTGGTATGTACCCACTTAAGATA 398123828 100322 NM_004006.2(DMD):c.10086+1G>A DMD Oct 22, 2013 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009;MedGen:C3668940,OMIM:302045;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Becker muscular dystrophy;Dilated cardiomyopathy 3B;Duchenne muscular dystrophy germline X 31180369 CACTATCCCATGGTGGAATATTGCACTCCGGTAAGTTTGACGCCAGCCTGACGTGAGAGTT 767388144 223309 NM_018297.3(NGLY1):c.1604G>A (p.Trp535Ter) NGLY1 Jan 07, 2016 MedGen:C3808991,OMIM:615273,Orphanet:ORPHA404454 Congenital disorder of deglycosylation inherited 3 25729140 AATCTATATTCAGAAAAGTTGAAACAGACTGGCACATGGTAACTTAATGCATAAAACCATT 1131691075 420798 NM_001042492.2(NF1):c.3870+1G>A NF1 Aug 22, 2014 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 17 31235773 GCCAGTAAAATAATGACATTCTGTTTCAAGGTTTGTATCATTCATTTTGTGTGTATGTGTG 267606881 24678 m.8529G>A MT-ATP8 Nov 02, 2016 MedGen:CN069323 Cardiomyopathy, apical hypertrophic, and neuropathy germline MT 8529 AAAATTATAACAAACCCTGAGAACCAAAATGAACGAAAATCTGTTCGCTTCATTCATTGCC 104893773 28077 NM_000539.3(RHO):c.316G>A (p.Gly106Arg) RHO Aug 01, 1993 MedGen:C3151001,OMIM:613731 Retinitis pigmentosa 4 germline 3 129529049 TACACCTCTCTGCATGGATACTTCGTCTTCGGGCCCACAGGATGCAATTTGGAGGGCTTCT 387906800 39126 NM_030662.3(MAP2K2):c.395G>A (p.Gly132Asp) MAP2K2 Dec 02, 2015 MedGen:C3809007,OMIM:615280;MedGen:CN166718,Orphanet:ORPHA98733;MedGen:CN517202 Cardiofaciocutaneous syndrome 4;Rasopathy;not provided germline;unknown 19 4110564 TGCACGAATGCAACTCGCCGTACATCGTGGGCTTCTACGGGGCCTTCTACAGTGACGGGGA 766379510 421864 NM_004183.3(BEST1):c.44G>A (p.Gly15Asp) BEST1 Sep 01, 2015 MedGen:CN517202 not provided germline 11 61951850 ACACAAGCCAAGTGGCTAATGCCCGCTTAGGCTCCTTCTCCCGCCTGCTGCTGTGCTGGCG 267606761 38418 NM_000787.3(DBH):c.1033G>A (p.Asp345Asn) DBH Oct 29, 2015 MedGen:C0342687,OMIM:223360,Orphanet:ORPHA230;MedGen:C0342687,OMIM:223360,Orphanet:ORPHA230 Dopamine beta hydroxylase deficiency;Dopamine beta hydroxylase deficiency germline 9 133647854 CATCCATCCCACCTTCTCCCAGGACGAAACGACTCCTCAGGCATCCGCTTGTACTACACAG 771965165 432467 NM_018116.3(MSTO1):c.966+1G>A MSTO1 Sep 22, 2017 MedGen:CN484737,OMIM:617675 MYOPATHY, MITOCHONDRIAL, AND ATAXIA germline 1 155612571 CCTGTCAGCTTCCCTTACCTGCATTATGATGTAAGTCTCGGTGCTCTTGTTCTGACTGCGG 387906760 39040 NM_007315.3(STAT1):c.821G>A (p.Arg274Gln) STAT1 Aug 01, 2011 MedGen:C3279990,OMIM:614162,Orphanet:ORPHA391487 Immunodeficiency 31C germline 2 190995184 CTATAGTTGCGGAGAGTCTGCAGCAAGTTCGGCAGCAGCTTAAAAAGTTGGAGGAATTGGA 137852894 17832 NM_000158.3(GBE1):c.1643G>A (p.Trp548Ter) GBE1 Apr 02, 2009 MedGen:C1856304,Orphanet:ORPHA308670;MedGen:C0017923,OMIM:232500,SNOMED CT:11179002 Glycogen storage disease IV, congenital neuromuscular;Glycogen storage disease, type IV germline 3 81537071 ATGCAGGTAATGAATTTGGGCATCCTGAATGGTTAGACTTCCCAAGAAAAGGAAATAATGA 34637584 16979 NM_198578.3(LRRK2):c.6055G>A (p.Gly2019Ser) LRRK2 Dec 07, 2017 MedGen:C1846862,OMIM:607060;MedGen:CN517202 Parkinson disease 8, autosomal dominant;not provided germline 12 40340400 GCTGCCATCATTGCAAAGATTGCTGACTACGGCATTGCTCAGTACTGCTGTAGAATGGGGA 199474722 78954 NM_024685.3(BBS10):c.1202G>A (p.Gly401Glu) BBS10 - MedGen:C1859568,OMIM:615987 Bardet-Biedl syndrome 10 germline 12 76346783 CATTTATACCACACTCTATAGTTCTTTGTGGACCAGTGCATGGTCTCATTGAACAACATGA 72656392 457699 NM_000089.3(COL1A2):c.946G>A (p.Gly316Ser) COL1A2 Nov 15, 2016 MedGen:C0268335,OMIM:130000,Orphanet:ORPHA287,SNOMED CT:20766005,SNOMED CT:83470009;MedGen:C0023931,OMIM:166200,SNOMED CT:385482004 Ehlers-Danlos syndrome, classic type;Osteogenesis imperfecta type I germline 7 94409732 ACACTGCATTTTCCTTCACAGGGCCTTCCCGGCGTTGCTGGGGCTCCCGGCCTCCCTGGAC 104894716 21354 NM_001022.3(RPS19):c.98G>A (p.Trp33Ter) RPS19 Mar 19, 2009 MedGen:C2676137,OMIM:105650 Diamond-Blackfan anemia 1 germline 19 41861138 TTAGGTCCGGGAAGCTGAAAGTCCCCGAATGGGTGGATACCGTCAAGCTGGCCAAGCACAA 775171520 213370 NM_032043.2(BRIP1):c.1343G>A (p.Trp448Ter) BRIP1 Aug 10, 2017 MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009 Familial cancer of breast;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome germline 17 61793727 TTGACACAATTGTTTTATTTTATTTCAGTTGGTTAGAAGCAAACGCTGAATATCTTGTAGA 863225079 214097 NM_006245.3(PPP2R5D):c.598G>A (p.Glu200Lys) PPP2R5D Oct 17, 2015 MedGen:C4225354,OMIM:616355,Orphanet:ORPHA457279;MedGen:CN517202 Mental retardation, autosomal dominant 35;not provided germline 6 43007271 ACAGGGGCTGAGTTTGACCCAGAGGAAGATGAGCCCACCCTGGAAGCTGCTTGGCCACATC 113994107 47565 NM_001845.5(COL4A1):c.1769G>A (p.Gly590Glu) COL4A1 Mar 08, 2011 MedGen:C1843512,OMIM:607595 Brain small vessel disease with hemorrhage not provided 13 110186513 GATTGAAAGGAGAGCGTGGCCCCCCTGGAGGAGTTGGATTCCCAGGCAGTCGTGGTGACAC 387906794 39115 NM_001001557.3(GDF6):c.595G>A (p.Ala199Thr) GDF6 Mar 12, 2018 MedGen:C3715164,OMIM:615360;MedGen:C3150968,OMIM:613703 Leber congenital amaurosis 17;Microphthalmia, isolated, with coloboma 6 not provided 8 96145336 TTCCCTTGCCTTTCGCCCCTACTGCTGGACGCGCGGACCCTGGACCCGCAGGGGGCGCCGC 606231305 170190 NM_003921.4(BCL10):c.57+1G>A BCL10 Nov 20, 2014 MedGen:C4015195,OMIM:616098 Immunodeficiency 37 germline 1 85276295 GAGGAGGACCTCACTGAAGTGAAGAAGGACGTGAGTAACGCAGCTGTGCCCAGGGCGGGCG 111033747 36574 NM_000155.3(GALT):c.658G>A (p.Glu220Lys) GALT Dec 04, 2012 MedGen:C0268151,OMIM:230400,Orphanet:ORPHA79239,SNOMED CT:124354006 Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase not provided 9 34648427 AAGAGTCAGCATGGAGAGCCCCTGCTAATGGAGTACAGCCGCCAGGAGCTACTCAGGAAGG 864309551 215197 NM_000147.4(FUCA1):c.1082G>A (p.Trp361Ter) FUCA1 Apr 14, 2015 MedGen:CN517202 not provided unknown 1 23848727 TCCAAGAAAGGCTTCTTGCTGTTGGGAAATGGCTGAGCATCAATGGGGAGGCTATCTATGC -1 485877 NM_006088.5(TUBB4B):c.1172G>A (p.Arg391His) TUBB4B Feb 16, 2018 MedGen:CN807950,OMIM:617879 LEBER CONGENITAL AMAUROSIS WITH EARLY-ONSET DEAFNESS germline 9 137243390 TCTCCGAGCAGTTCACGGCCATGTTCCGGCGCAAGGCCTTCCTGCACTGGTACACGGGCGA 140015315 178848 NM_000888.4(ITGB6):c.427G>A (p.Ala143Thr) ITGB6 Feb 13, 2015 MedGen:C4015557,OMIM:616221 Amelogenesis imperfecta, type IH germline 2 160195535 GTGGATTTGTATTACCTCATGGACCTCTCCGCCTCCATGGATGACGACCTCAACACAATAA 387906588 38547 NM_001105.4(ACVR1):c.982G>A (p.Gly328Arg) ACVR1 Mar 01, 2009 MedGen:C0016037,OMIM:135100,Orphanet:ORPHA337,SNOMED CT:82725007 Progressive myositis ossificans germline 2 157766005 CATTTGCACATAGAGATATTTGGGACCCAAGGGAAACCAGCCATTGCCCATCGAGATTTAA 80356462 23638 NM_175875.4(SIX5):c.886G>A (p.Ala296Thr) SIX5 Aug 27, 2009 MedGen:C1970479,OMIM:610896 Branchiootorenal syndrome 2 germline 19 45767073 GACCTGGAGAGAGGGGCGGCCCCAGTGTCCGCCGAGGCCGCTGCCCAGGGCTCCATATTCC 137854451 31787 NM_001972.3(ELANE):c.640G>A (p.Gly214Arg) ELANE Jun 30, 2015 MedGen:C1859966,OMIM:202700;MedGen:CN517202 Severe congenital neutropenia autosomal dominant;not provided germline 19 856000 AGCCCCTTGGTCTGCAACGGGCTAATCCACGGAATTGCCTCCTTCGTCCGGGGAGGCTGCG 180177263 200546 NM_000030.2(AGXT):c.753G>A (p.Trp251Ter) AGXT Nov 27, 2014 MedGen:C0268164,OMIM:259900,Orphanet:ORPHA93598,SNOMED CT:65520001 Primary hyperoxaluria, type I germline 2 240875181 CCTGGACATCAAGTGGCTGGCCAACTTCTGGGGCTGTGACGACCAGCCCAGGATGTGAGGC 886041775 264883 NM_014271.3(IL1RAPL1):c.703+1G>A IL1RAPL1 May 12, 2016 MedGen:CN517202 not provided germline X 29399309 TGAGAAGAACTACTGAATTAACTGTTACAGGTAATCACAGTCTTCAATATTTCACTTGCAA 104894901 26466 NM_001129765.1(NSDHL):c.613G>A (p.Gly205Ser) NSDHL Feb 01, 2011 MedGen:C0265267,OMIM:308050,Orphanet:ORPHA139,SNOMED CT:17608003 Child syndrome germline X 152865888 ACCACAGCCATCCGCCCTCATGGCATTTTCGGCCCAAGGGACCCGCAGTTGGTACCCATCC -1 466602 NM_000267.3(NF1):c.4110+1G>A NF1 May 23, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003 Hereditary cancer-predisposing syndrome;Neurofibromatosis, type 1 germline 17 31249120 CTTCGAAGTGTGTGCCACTGTTTATACCAGGTATGCTTACAGTTAGAGATTACCATTATTA 587783812 169976 NM_000252.2(MTM1):c.232-1G>A MTM1 Feb 08, 2013 MedGen:C0410203,OMIM:310400,Orphanet:ORPHA596,SNOMED CT:46804001 Severe X-linked myotubular myopathy germline X 150614588 ATACTGACTACTGTATTTTTGTCCATTACAGGATTCTTCTCTAATACTTGATGTTCCTCTG 193303018 24639 m.3242G>A MT-TL1 Sep 19, 2013 MeSH:D009190,MedGen:C0026986,OMIM:614286 Myelodysplastic syndrome somatic MT 3242 CACCCAAGAACAGGGTTTGTTAAGATGGCAGAGCCCGGTAATCGCATAAAACTTAAAACTT 886039784 260476 NR_033294.1(SNORD118):n.57G>A SNORD118 Oct 10, 2016 MedGen:C3281200,OMIM:614561 Leukoencephalopathy, brain calcifications, and cysts germline 17 8173532 GTTCCTCCTCCGGAGGGCAGATTAGAACATGATGATTGGAGATGCATGAAACGTGATTAAC 1050086 24825 NM_000354.5(SERPINA7):c.571G>A (p.Asp191Asn) SERPINA7 Sep 08, 2016 na Thyroxine-binding globulin, slow germline X 106036488 ACCAAAGGGAAAGTTGTGGGTCTAATTCAAGACCTCAAGCCAAACACCATCATGGTCTTAG 387906819 39170 NM_005257.5(GATA6):c.1367G>A (p.Arg456His) GATA6 Dec 11, 2011 MedGen:C1838780,OMIM:600001 Pancreatic agenesis and congenital heart disease germline 18 22181517 ACTGTCACACCACAACTACCACCTTATGGCGCAGAAACGCCGAGGGTGAACCCGTGTGCAA 150841256 438959 NM_001177317.1(SLC34A3):c.448+1G>A SLC34A3 Sep 25, 2017 MedGen:CN517202 not provided germline 9 137232928 CCATCGTGGTCAGCATGGTGGCTGCTAAGCGTGGGTGCACACTCCCTCCCCGGGTGGTGGG 869312977 226998 NM_007214.4(SEC63):c.452+1G>A SEC63 - Human Phenotype Ontology:HP:0006557,MedGen:C0158683,OMIM:174050,SNOMED CT:72925005 Congenital cystic disease of liver germline 6 107921796 GTTCATGAGGATAGCAAAAGCTTATGCTGCGTAAGTATCAGGATCCATTACAAATTTTTAA 747806672 191278 NM_022336.3(EDAR):c.1144G>A (p.Gly382Ser) EDAR May 28, 2015 MedGen:C0406702,OMIM:224900,Orphanet:ORPHA248,SNOMED CT:27025001;MedGen:CN517202 Autosomal recessive hypohidrotic ectodermal dysplasia syndrome;not provided germline 2 108897110 AAAACGTGGCGCCACCTCGCCGAGAGCTTCGGCCTGAAGAGGGATGAGATTGGGGGCATGA 121918660 27781 NM_001768.6(CD8A):c.331G>A (p.Gly111Ser) CD8A Jul 01, 2001 MedGen:C1837065,OMIM:608957,Orphanet:ORPHA169085 Cd8 deficiency, familial germline 2 86790400 ACCCTGAGCGACTTCCGCCGAGAGAACGAGGGCTACTATTTCTGCTCGGCCCTGAGCAACT 1131691822 421923 NM_001844.4(COL2A1):c.655G>A (p.Gly219Arg) COL2A1 May 19, 2017 MedGen:CN517202 not provided germline 12 47995763 TTGACCTGGTATCCTCATTTTACTTTTTAGGGGCCTCAAGGATTTCAAGGCAATCCTGGTG 398123665 99901 NM_001918.3(DBT):c.251G>A (p.Trp84Ter) DBT Aug 23, 2013 MedGen:C0024776,OMIM:248600,SNOMED CT:27718001 Maple syrup urine disease germline 1 100235436 AAGGGATTAGAGAAGTAACTGTTAAAGAATGGTAAGTGAATCTGAAAAAAGCTCTTAAGTA 121908086 19087 NM_000547.5(TPO):c.1943G>A (p.Arg648Gln) TPO Mar 01, 1999 MedGen:C1291299,OMIM:274500,SNOMED CT:124204003 Deficiency of iodide peroxidase germline 2 1493976 GCTTAGCTGAAAACTTCCTCCCCAGGGCTCGGACAGGGCCCCTGTTTGCCTGTCTCATTGG 28934886 15969 NM_000404.3(GLB1):c.1370G>A (p.Arg457Gln) GLB1 Aug 01, 1991 MedGen:C0268273,OMIM:230650,Orphanet:ORPHA79257 Gangliosidosis GM1 type 3 germline 3 33016818 CCCCACAGATCCCCCAGGGAGTCCTTGAGCGAAACAATGTGATCACTCTGAACATAACAGG 886039542 260018 NM_001844.4(COL2A1):c.2833G>A (p.Gly945Ser) COL2A1 Mar 14, 2016 MedGen:CN517202 not provided germline 12 47978659 AGCGGCCCCCCTGGCCGAGCTGGTGAACCCGGCCTCCAAGGTCCTGCTGGACCCCCTGGCG 587779699 107206 NM_000090.3(COL3A1):c.1970G>A (p.Gly657Glu) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188998312 GTGGTCCTCCAGGAGAAAATGGAAAACCTGGGGAACCAGTAAGTTACGTTTCATTATTCAA 113994129 16135 NM_000642.2(AGL):c.2039G>A (p.Trp680Ter) AGL Jun 26, 2017 MedGen:C1968740;MedGen:C0017922,OMIM:232400,Orphanet:ORPHA308684,SNOMED CT:66937008;MedGen:CN517202 Glycogen storage disease IIIb;Glycogen storage disease type III;not provided germline 1 99881329 TGGTTTCTGAAGAACGGTTTTACACTAAGTGGAATCCTGAAGCATTGCCTTCAAACACAGG -1 439484 NM_001284214.1(TRIP12):c.3401+1G>A TRIP12 Nov 06, 2017 MedGen:CN593636,OMIM:617752 MENTAL RETARDATION, AUTOSOMAL DOMINANT 49 germline 2 229798874 TGCCTCAAAGGATACCATCTCCAATAATAGGTGAAGTGGGGGGAGTTTTATGTTTCTTCTA 747119727 204976 NM_058004.3(PI4KA):c.5560G>A (p.Asp1854Asn) PI4KA Jul 01, 2015 MedGen:C4225295,OMIM:616531 Polymicrogyria, perisylvian, with cerebellar hypoplasia and arthrogryposis germline 22 20713292 TGGCAGGCAGCCATCTTCAAGGTGGGAGACGACTGCCGGCAGGTAAGCAGGGTCAGGCCTC 182135982 212289 NM_153240.4(NPHP3):c.1817G>A (p.Trp606Ter) NPHP3 Apr 15, 2015 MedGen:C0687120,Orphanet:ORPHA655,SNOMED CT:204958008 Nephronophthisis germline 3 132699988 CTGCTAAGCTTCTGGAAGAATTTCCACGTTGGCTGGAAAAACTCTCTGCTCGTCATCAAGG 72549405 16253 NM_032581.3(FAM126A):c.51+1G>A FAM126A Nov 16, 2010 MedGen:C1864663,OMIM:610532,SNOMED CT:702379005 Hypomyelination and Congenital Cataract germline 7 22991060 GTTGTGGAGGAATGGTTGTCAGAGTTTAAGGTAATATTTACTGTTCTACTATAGTAATTAT 773470671 227164 NM_017909.3(RMND1):c.830+1G>A RMND1 Dec 22, 2015 MedGen:C0751651,Orphanet:ORPHA68380 Mitochondrial diseases germline 6 151427481 AAATGAAGAACTTAACTACATAAAAATAGAGTAAGCAACTTTTCATCAAATTTATGAAAGG 62514950 108582 NM_000277.2(PAH):c.809G>A (p.Arg270Lys) PAH Jul 05, 2017 MedGen:C0031485,OMIM:261600,Orphanet:ORPHA716,SNOMED CT:154735006;MedGen:CN517202 Phenylketonuria;not provided germline 12 102852848 TCCGAGTCTTCCACTGCACACAGTACATCAGACATGGATCCAAGCCCATGTATACCCCCGA 121913667 28934 NM_005378.5(MYCN):c.231G>A (p.Trp77Ter) MYCN Sep 01, 2008 MedGen:C0796068,OMIM:164280 Feingold syndrome 1 germline 2 15942295 CGCGGAGCACAGCTCCGAGCCCCCGAGCTGGGTCACGGAGATGCTGCTTGAGAACGAGCTG 750219200 402564 NM_002878.3(RAD51D):c.803G>A (p.Trp268Ter) RAD51D Jul 07, 2017 MedGen:C3280345,OMIM:614291;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 4;Hereditary cancer-predisposing syndrome;not provided germline 17 35101301 GGAGGCTCAAACCTGCCCTCGGACGCTCCTGGAGCTTTGTGCCCAGCACTCGGATTCTCCT 267607552 77714 NM_170707.3(LMNA):c.1380+1G>A LMNA May 28, 2014 MedGen:CN517202 not provided germline 1 156136437 TTTGTCCGGCTGCGCAACAAGTCCAATGAGGTAGGCTCCTGCTCAGGGTCTAAGGGGATAC 119482081 19839 NM_006415.3(SPTLC1):c.398G>A (p.Cys133Tyr) SPTLC1 Mar 07, 2013 MedGen:C0020071,OMIM:162400,Orphanet:ORPHA36386 Neuropathy hereditary sensory and autonomic type 1 germline 9 92080045 CATCTCTAAAGAAGTATGGCGTGGGGACTTGTGGACCCAGAGGATTTTATGGCACATTTGG 121434423 21787 NM_001492.5(GDF1):c.800G>A (p.Cys267Tyr) GDF1 Nov 01, 2007 Human Phenotype Ontology:HP:0001719,MedGen:C0013069,Orphanet:ORPHA3426,SNOMED CT:7484005 Double outlet right ventricle germline 19 18868916 CCGTGTTGGGCGGCGGCCCCGGGGGCGCTTGTCGCGCGCGGCGGCTGTACGTGAGCTTCCG 120074174 18214 NM_000187.3(HGD):c.808G>A (p.Gly270Arg) HGD Dec 18, 2015 MedGen:C0002066,OMIM:203500,Orphanet:ORPHA56 Alkaptonuria germline;unknown 3 120641660 GTCTCCCCGTTCAATGTTGTGGCCTGGCACGGGAATTATACACCCTACAAGTACAACCTGA 397508561 68409 NM_000492.3(CFTR):c.3435G>A (p.Trp1145Ter) CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline 7 117614680 AGCCATGAATATCATGAGTACATTGCAGTGGGCTGTAAACTCCAGCATAGATGTGGATAGC 121908857 21511 NM_001098484.2(SLC4A4):c.1661G>A (p.Arg554His) SLC4A4 Nov 01, 1999 MedGen:C1970309,OMIM:604278,Orphanet:ORPHA93607 Renal tubular acidosis, proximal, with ocular abnormalities and mental retardation germline 4 71472728 GGGACAATAATTTTGACTATTTGGAGTTTCGCCTTTGGATTGGCCTGTGGTCCGCCTTCCT 387906334 20278 NM_007375.3(TARDBP):c.*697G>A TARDBP Nov 01, 2009 MedGen:C2677565,OMIM:612069;MedGen:C3150170 Amyotrophic lateral sclerosis type 10;FRONTOTEMPORAL DEMENTIA WITH TDP43 INCLUSIONS, TARDBP-RELATED germline 1 11023351 TCTTTGACGGTGGGTGTCCCATTTTTATCCGCTACTCTTTATTTCATGGAGTCGTATCAAC 730882193 48744 NM_004655.3(AXIN2):c.1989G>A (p.Trp663Ter) AXIN2 Mar 13, 2013 MedGen:C1837750,OMIM:608615,Orphanet:ORPHA300576 Oligodontia-colorectal cancer syndrome germline 17 65536472 AGGCGAACGAGCCAGCCGGCACCATCTGTGGGGGGGCAACAGCGGGCACCCCCGCACCACC 121434592 29022 NM_005163.2(AKT1):c.49G>A (p.Glu17Lys) AKT1 May 31, 2016 Human Phenotype Ontology:HP:0030078,MeSH:C538231,MedGen:C0152013;MedGen:C0007112;MedGen:C0278701;MedGen:C0858252,Orphanet:ORPHA213528;MedGen:C0699790,OMIM:114500,SNOMED CT:269533000;MeSH:D015179,MedGen:CN236642;MedGen:C0279763;MedGen:C2239176,OMIM:114550,Orphanet:ORPHA88673,SNOMED CT:187769009,SNOMED CT:25370001;MeSH:C562393,MedGen:C0151779,SNOMED CT:93655004;MeSH:D008577,MedGen:C0025284,Orphanet:ORPHA252025;Gene:6765,Human Phenotype Ontology:HP:0100615,MedGen:C0919267,OMIM:167000,SNOMED CT:123843001;Human Phenotype Ontology:HP:0100013,MeSH:D001943,MedGen:C1458155,Orphanet:ORPHA180250,SNOMED CT:126926005;Human Phenotype Ontology:HP:0100031,MeSH:D013964,MedGen:C0040136,Orphanet:ORPHA100087;Human Phenotype Ontology:HP:0030358,MeSH:D002289,MedGen:C0007131,SNOMED CT:254637007;Human Phenotype Ontology:HP:0002669,MeSH:D012516,MedGen:C0029463,OMIM:259500,Orphanet:ORPHA668,SNOMED CT:21708004;Human Phenotype Ontology:HP:0100787,MeSH:D011471,MedGen:C0033578;MedGen:C0085261,OMIM:176920,Orphanet:ORPHA744,SNOMED CT:23150001;Gene:7864,Human Phenotype Ontology:HP:0030357,MeSH:D055752,MedGen:C0149925,OMIM:182280,Orphanet:ORPHA70573;Human Phenotype Ontology:HP:0030359,MedGen:C0149782;MeSH:C535575,MedGen:C1168401,OMIM:275355,Orphanet:ORPHA67037;Human Phenotype Ontology:HP:0006740,MedGen:C0279680;MeSH:D002583,MedGen:CN236667 Adenocarcinoma of lung;Adenocarcinoma of prostate;Adenocarcinoma of stomach;Breast adenocarcinoma;Carcinoma of colon;Colorectal Neoplasms;Endometrial Endometrioid Adenocarcinoma, Variant with Squamous Differentiation;Hepatocellular carcinoma;Malignant melanoma of skin;Meningeal Neoplasms;Neoplasm of ovary;Neoplasm of the breast;Neoplasm of the thyroid gland;Non-small cell lung cancer;Osteosarcoma;Prostate neoplasm;Proteus syndrome;Small cell lung cancer;Squamous cell carcinoma of lung;Squamous cell carcinoma of the head and neck;Transitional cell carcinoma of the bladder;Uterine cervical neoplasms somatic 14 104780214 GTGGCTCTCACCACCCGCACGTCTGTAGGGGAGTACATCAAGACCTGGCGGCCACGCTACT -1 431292 NM_012160.4(FBXL4):c.513-1G>A FBXL4 Aug 10, 2017 MedGen:C3809592,OMIM:615471,Orphanet:ORPHA369897 Mitochondrial DNA depletion syndrome 13 (encephalomyopathic type) germline 6 98917720 TGTATTATAGGGAAGTTTCTTTTTTTGGCAGATGGGAGATTCTTTGGTCAGAGAGACCTAC 763837297 426741 NM_001244808.1(FOXP1):c.869+1G>A FOXP1 Mar 20, 2017 MedGen:C3150923,OMIM:613670 Mental retardation with language impairment and with or without autistic features de novo 3 71041327 GCTCTCAGTCCACACTCCCAAAAGGGAAAGGTAGGAACCAGCCACTGAGATGGGTCCAAAA 281874683 35801 NM_000495.4(COL4A5):c.1904G>A (p.Gly635Asp) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108598826 TCGGCCCTCCAGGCCCAGTAGGTGAAAAAGGCATACAAGGTGTGGCAGGAAATCCAGGCCA 878854488 238788 NM_002354.2(EPCAM):c.429G>A (p.Trp143Ter) EPCAM Dec 23, 2015 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Lynch syndrome germline 2 47375237 AACTGACATTGTCTTTTTACTTTATAGCTGGATCATCATTGAACTAAAACACAAAGCAAGA 119103251 17338 NM_005609.3(PYGM):c.613G>A (p.Gly205Ser) PYGM Sep 21, 2016 MedGen:C0017924,OMIM:232600,Orphanet:ORPHA368,SNOMED CT:55912009;MedGen:CN517202 Glycogen storage disease, type V;not provided germline;unknown 11 64757826 CCCGAGTTCACGCTACCTGTGCACTTCTACGGCCATGTGGAGCACACCAGCCAGGGTGCCA 1064793941 408472 NM_015531.5(C2CD3):c.3910+1G>A C2CD3 Jul 21, 2015 MedGen:CN517202 not provided germline 11 74085617 TTGCTGTCTATCATGAAAATACCAAGTCAGGTGAGCACCATATGACTTGTCACAATCAAAA 267606555 19926 NM_003977.3(AIP):c.469-1G>A AIP Jun 21, 2012 MedGen:C0346302,OMIM:102200,Orphanet:ORPHA96256,SNOMED CT:254957009 Somatotroph adenoma germline 11 67490037 GCCCCGCTGTGATATGCCCCATGCCCTGCAGGTGGAGAGCCCTGGCACGTACCAGCAGGAC 267606862 18975 NM_000520.5(HEXA):c.1176G>A (p.Trp392Ter) HEXA Jan 01, 1992 MedGen:C0039373,OMIM:272800,Orphanet:ORPHA845,SNOMED CT:111385000 Tay-Sachs disease germline 15 72346681 GATTCAGCCAGACACAATCATACAGGTGTGGCGAGAGGATATTCCAGTGAACTATATGAAG 281875376 39543 NM_005857.4(ZMPSTE24):c.1349G>A (p.Trp450Ter) ZMPSTE24 Nov 01, 2010 MedGen:C1837756,OMIM:608612,Orphanet:ORPHA90154;MedGen:CN517202 Mandibuloacral dysplasia with type B lipodystrophy;not provided germline 1 40292590 AAGATAACTTGGGATTCCCTGTTTCTGACTGGTTGTTCTCAATGTGGCATTATTCTCATCC -1 442372 NM_033380.2(COL4A5):c.1258G>A (p.Gly420Arg) COL4A5 Jan 13, 2017 MedGen:CN517202 not provided germline X 108591150 GATGAAGGACCACCTGGAATTTCCATTCCTGGACCTCCTGGACTTGACGGACAGCCTGGGG 369255297 39954 NM_025099.5(CTC1):c.2611G>A (p.Val871Met) CTC1 Jan 22, 2012 MedGen:C2677299,OMIM:612199 Cerebroretinal microangiopathy with calcifications and cysts 1 germline 17 8231334 GAGCTTGAAAGCTCCCAGGATATCCAAGATGTGCTGGATGCAAACAAGTCATTGCCTGAAT 61751407 105292 NM_000350.2(ABCA4):c.5714+5G>A ABCA4 May 09, 2017 MedGen:C1858806,OMIM:604116;MedGen:C1866422,OMIM:601718;MedGen:C0271093,Orphanet:ORPHA827,SNOMED CT:70099003;MeSH:C535804,MedGen:C1855465,OMIM:248200;MedGen:CN517202 Cone-rod dystrophy 3;Retinitis pigmentosa 19;Stargardt disease;Stargardt disease 1;not provided germline;unknown 1 94010795 CAGCGCCACTTCTTCCTCTCCCAATGGTACGTCCATGCCACACCCTGGGCCAGTGGGCAGC 879253722 33388 NM_000080.3(CHRNE):c.344+1G>A CHRNE Aug 01, 2000 MedGen:C1837091,OMIM:608931 Myasthenic syndrome, congenital, associated with acetylcholine receptor deficiency germline 17 4902216 GTGGCTGCCAGAGATTGTGCTGGAAAACAAGTGAGAACCGGGCCAGACGCCAGGCTGGAGG 45517399 58587 NM_000548.4(TSC2):c.5160+1G>A TSC2 Feb 20, 2017 MedGen:C1860707,OMIM:613254;MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000;MedGen:CN517202 Tuberous sclerosis 2;Tuberous sclerosis syndrome;not provided germline 16 2088140 GTGGCCCGCCAGATGGCCCTGCACGCAAATGTGAGTGGGGGTGGGTCCAGGCGTGAGCTGG 1085307316 414264 NM_001204.6(BMPR2):c.1228G>A (p.Gly410Arg) BMPR2 - MedGen:C0152171,OMIM:178600,SNOMED CT:26174007 Primary pulmonary hypertension germline 2 202532684 GCTTTGAAACAAGTAGACATGTATGCTCTTGGACTAATCTATTGGGAGATATTTATGAGAT 387906409 24238 NM_001609.3(ACADSB):c.1228G>A (p.Gly410Ser) ACADSB Nov 01, 2000 MedGen:C1864912,OMIM:610006,Orphanet:ORPHA79157,SNOMED CT:444838008 Deficiency of 2-methylbutyryl-CoA dehydrogenase germline 10 123053160 GTGGAGAAATACTTCCGAGATGCAAAGATTGGTAAATAGATTTTTTTTTTTTACATTTTAT 773223671 472480 NM_000465.3(BARD1):c.1905G>A (p.Trp635Ter) BARD1 Jun 09, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 2 214730507 GTTTGCTTTAATTCTTGTGTTTTTGTCAGGGGTAAAAGCATGTCTACGAAGAAAAGTATGT 137852810 33411 NM_000747.2(CHRNB1):c.865G>A (p.Val289Met) CHRNB1 Apr 05, 2017 MedGen:C4225374,OMIM:616313 Myasthenic syndrome, congenital, 2a, slow-channel germline 17 7454341 CTCTCAATCTTTGCCCTGCTGACCCTTACTGTGTTCCTGCTGCTGCTGGCTGACAAAGTAC 387906863 39323 NM_003560.3(PLA2G6):c.1904G>A (p.Arg635Gln) PLA2G6 Oct 12, 2010 MedGen:C2751842,OMIM:612953,Orphanet:ORPHA199351 Parkinson disease 14 germline 22 38115657 CCCTAGACCAGCTGGTGTGGCGGGCGGCCCGAAGCAGCGGGGCAGCTCCTACTTACTTCCG 370523609 227889 NM_000016.5(ACADM):c.600-18G>A ACADM Nov 26, 2016 MedGen:C0220710,OMIM:201450,Orphanet:ORPHA42,SNOMED CT:128596003;MedGen:CN517202 Medium-chain acyl-coenzyme A dehydrogenase deficiency;not provided germline;unknown 1 75745788 TGTTATTTGCCGATATTATCACCATTATCCGGTATGTGTATCTCTTAGGTATTTTTTATTG 1060499658 384429 NM_000489.4(ATRX):c.6122G>A (p.Ser2041Asn) ATRX Mar 24, 2014 MedGen:C1845055,OMIM:301040,Orphanet:ORPHA847 ATR-X syndrome maternal X 77589929 CACTAATCTGTTTTTTTAGCCTTGTTTTCAGCCAGTCCCTCATATCTCTGGACTTGATTGA 267607096 16181 NM_001142617.1(STRA6):c.69G>A (p.Trp23Ter) STRA6 Mar 01, 2009 MedGen:C1832661,OMIM:601186,Orphanet:ORPHA2470 Microphthalmia syndromic 9 germline 15 74202199 GGCCACAGAGGACTACTCCTATGGCAGCTGGTACATCGATGAGCCCCAGGGGGGCGAGGAG -1 485712 NM_001252634.1(THRB):c.1378G>A (p.Glu460Lys) THRB Jun 15, 2012 MedGen:C2937288,OMIM:188570 Thyroid hormone resistance, generalized, autosomal dominant germline 3 24122892 CTCTTCCCCCCTTTGTTCTTGGAAGTGTTCGAGGATTAGACTGACTGGATTCATTCTCATA 112832879 366840 NM_033084.4(FANCD2):c.990-1G>A FANCD2 Jan 11, 2017 MedGen:CN517202 not provided germline 3 10043483 GAGTAATTTTTTTCCTCTCTGCTACTTGTAGTTCCTCAGGAAATCAAGAAAGCAGCGGTCA 606231459 171255 NM_001543.4(NDST1):c.1831G>A (p.Gly611Ser) NDST1 Dec 03, 2014 MedGen:C4015283,OMIM:616116 Mental retardation, autosomal recessive 46 germline 5 150541651 TGTGACCGCTTCCCAAAGCTCCTCATCATCGGCCCCCAGAAAACAGGCAGGTCTCTCTGCT 80338789 34007 NM_000334.4(SCN4A):c.3395G>A (p.Arg1132Gln) SCN4A Sep 01, 2016 MedGen:C3714580,OMIM:170400;MedGen:C2750061,OMIM:613345;MedGen:CN517202 Hypokalemic periodic paralysis 1;Hypokalemic periodic paralysis, type 2;not provided germline 17 63947091 TGGGACCCATCAAATCCCTGCGGACACTGCGGGCCCTGCGTCCCCTGAGGGCACTGTCCCG 28939082 20119 NM_015560.2(OPA1):c.899G>A (p.Gly300Glu) OPA1 Oct 01, 2000 MedGen:C0338508,OMIM:165500,Orphanet:ORPHA98672,SNOMED CT:2065009 Dominant hereditary optic atrophy germline 3 193637980 AGGTTGTTGTGGTTGGAGATCAGAGTGCTGGAAAGACTAGTGTGTTGGAAATGATTGCCCA 72552302 103209 NM_000531.5(OTC):c.77+5G>A OTC - MedGen:CN517202 not provided unknown X 38352778 CACAACTTCATGGTTCGAAATTTTCGGTAAGTGATGGTCAGAGACTTGGGTTTGATTTAGG 121918396 32901 NM_000041.3(APOE):c.683G>A (p.Trp228Ter) APOE Nov 01, 1992 MedGen:C0020479,OMIM:617347,Orphanet:ORPHA412,SNOMED CT:398796005 Familial type 3 hyperlipoproteinemia germline 19 44908979 GCCAGCCGCTACAGGAGCGGGCCCAGGCCTGGGGCGAGCGGCTGCGCGCGCGGATGGAGGA 181396238 36442 NM_000060.4(BTD):c.1432G>A (p.Ala478Thr) BTD Dec 04, 2012 MedGen:C0220754,OMIM:253260,Orphanet:ORPHA79241,SNOMED CT:8808004 Biotinidase deficiency not provided 3 15645288 TTCGACACCTGTGGACAGGAAATCACAGAGGCCACGGGGATATTTGAGTTTCACCTGTGGG 104894139 16827 NM_000102.3(CYP17A1):c.1073G>A (p.Arg358Gln) CYP17A1 Oct 01, 1997 MedGen:C3277849 Isolated 17,20-lyase deficiency germline 10 102832577 ACCGTCTCCTCCTGCTGGAGGCCACCATCCGAGAGGTGCTTCGCCTCAGGCCCGTGGCCCC 104894001 20256 NM_018965.3(TREM2):c.132G>A (p.Trp44Ter) TREM2 Sep 01, 2002 MedGen:C1857316,OMIM:221770 Polycystic lipomembranous osteodysplasia with sclerosing leukoencephalopathy germline 6 41161522 GTCTTGCCCCTATGACTCCATGAAGCACTGGGGGAGGCGCAAGGCCTGGTGCCGCCAGCTG 1057520529 378413 NM_014009.3(FOXP3):c.1190G>A (p.Arg397Gln) FOXP3 Mar 11, 2015 MedGen:CN517202 not provided germline X 49251440 ACAACCTGAGTCTGCACAAGTGCTTTGTGCGGGTGGAGAGCGAGAAGGGGGCTGTGTGGAC 587779691 107198 NM_000090.3(COL3A1):c.1763G>A (p.Gly588Asp) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188997166 TTAGTAAATACCGACCACTTCTTCTTTAGGGTGCTCCTGGTAAGAATGGAGAACGAGGTGG 1057518714 361196 NM_006412.3(AGPAT2):c.503G>A (p.Trp168Ter) AGPAT2 May 01, 2016 MedGen:C1720862,OMIM:608594 Congenital generalized lipodystrophy type 1 germline;paternal 9 136676670 AGGCTCTCCTCTCCCTGCAGCTCAAAGTGTGGATCTATCCCGAGGGTACTCGCAACGACAA 587782703 420751 NM_003000.2(SDHB):c.72+1G>A SDHB Jun 28, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 1 17053947 GCCACAACCCTTGGCGGAGCCTGCCTGCAGGTGAGTCCTGGAGCCTCAGAGAGGGAAAAGT 121918531 23990 NM_005587.3(MEF2A):c.848G>A (p.Gly283Asp) MEF2A Dec 15, 2004 na Coronary artery disease/myocardial infarction germline 15 99690412 TTCGAGTTGTCATCCCCCCTTCAAGCAAGGGCATGATGCCTCCACTAGTAAGTTGAACCTT 773126191 40160 NM_001004334.3(GPR179):c.1784+1G>A GPR179 Feb 10, 2012 MedGen:C3281215,OMIM:614565 Congenital stationary night blindness, type 1E germline 17 38334703 ACTGCTTTCCGCTGCCTTCCACACAGCCAGGTGAGGACGGACTCACCTCCCCACACCCCCT 121908791 68217 NM_000492.3(CFTR):c.273+1G>A CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008;MedGen:CN517202 Cystic fibrosis;not provided germline;unknown 7 117509143 ATGTTCTATGGAATCTTTTTATATTTAGGGGTAAGGATCTCATTTGTACATTCATTATGTA 886039489 260282 NM_004484.3(GPC3):c.175+1G>A GPC3 Jul 31, 2015 MedGen:CN517202 not provided germline X 133985274 TCAAGTGGGTGCCAGAAACTCCCGTGCCAGGTGAGGAGGGGTCCCTTGAGCGTGCCTAGCG 104886189 35884 NM_000495.4(COL4A5):c.2605G>A (p.Gly869Arg) COL4A5 Sep 02, 2016 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917;MedGen:CN517202 Alport syndrome, X-linked recessive;not provided germline X 108620354 CCAGGTGAAAGAGGCAGTCCAGGGATCCCCGGAGCACCTGGTCCTATAGGACCTCCAGGAT 28931601 32027 NM_000165.4(GJA1):c.286G>A (p.Val96Met) GJA1 Jun 01, 2004 MedGen:C0812437,OMIM:164200 Oculodentodigital dysplasia germline 6 121447133 TCTGTACCCACACTCTTGTACCTGGCTCATGTGTTCTATGTGATGCGAAAGGAAGAGAAAC 730880131 246028 NM_000527.4(LDLR):c.1186+1G>A LDLR Mar 25, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline;not applicable 19 11111640 ACCCCCACACGAAGGCCTGCAAGGCTGTGGGTGAGCACGGGAAGGCGGCGGGTGGGGGCGG 312262808 49482 NM_003611.2(OFD1):c.111G>A (p.Lys37=) OFD1 Feb 28, 2013 MedGen:C1510460,OMIM:311200,Orphanet:ORPHA2750,SNOMED CT:52868006 Oral-facial-digital syndrome not provided X 13735346 TAAGGATCGGGGTATACTGGATACACTCAAGGTATCGGATTTAGGCGTATCTGTGTCAGCT 118203438 58254 NM_000368.4(TSC1):c.737+1G>A TSC1 Dec 23, 2014 MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000;MedGen:CN517202 Tuberous sclerosis syndrome;not provided germline 9 132921362 ATCCAAGGACCATGAACTGGACCCTCGAAGGTATAGAAACTAGTGTCAAAATTTTAAAGAA 397514994 441782 NM_000548.4(TSC2):c.1946+1G>A TSC2 Jun 23, 2017 MedGen:CN517202 not provided germline 16 2071617 GTTCAGCCCCTACTGCGTCTGCGACTACATGTACGCGGGACCTCGCCCACGGCCCATGAGG 398122925 48489 NM_001142339.2(GNAL):c.463G>A (p.Glu155Lys) GNAL Jan 01, 2013 MedGen:C3554447,OMIM:615073,Orphanet:ORPHA329466 Dystonia 25 germline 18 11824987 GGCGTGAAGGCATGCTTTGAGAGATCCAACGAATACCAGCTGATTGACTGTGCACAATAGT 397518475 94331 NM_006208.2(ENPP1):c.530G>A (p.Cys177Tyr) ENPP1 Oct 03, 2013 MedGen:C3809781,OMIM:615522,Orphanet:ORPHA324561 Cole disease germline 6 131851241 CAGATGACTGCAAGGACAAGGGCGACTGCTGCATCAACTACAGTTCTGTGTGTCAAGGTCA 398123763 100162 NM_003494.3(DYSF):c.1053+1G>A DYSF Feb 24, 2016 MedGen:C1850889,OMIM:253601,Orphanet:ORPHA268;MedGen:C1850808,OMIM:254130,Orphanet:ORPHA45448 Limb-girdle muscular dystrophy, type 2B;Miyoshi muscular dystrophy 1 germline 2 71520905 TGTGTGCTGGGGCCTGGGGACGAAGCGCCTGTGAGTACATTTCCCTGGGTCTTCCTTACGG 104894742 24880 NM_000044.4(AR):c.4G>A (p.Glu2Lys) AR Sep 15, 1996 MedGen:C0268301,OMIM:312300,Orphanet:ORPHA90797,SNOMED CT:58672003 Partial androgen insensitivity syndrome germline X 67545150 AGGTGGAAGATTCAGCCAAGCTCAAGGATGGAAGTGCAGTTAGGGCTGGGAAGGGTCTACC 1060500376 402353 NM_000267.3(NF1):c.6641+1G>A NF1 Dec 12, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003 Hereditary cancer-predisposing syndrome;Neurofibromatosis, type 1 germline 17 31337881 GCTGGACCAGTGGACAGAACTAGCTCAAAGGTATGTCCTAAATTAAATATAAGTTGTAAAA -1 485940 NM_000280.4(PAX6):c.1183+1G>A PAX6 Mar 03, 2017 MedGen:C0344542,OMIM:106210 Aniridia 1 unknown 11 31790709 CAATGGGCACCTCGGGCACCACTTCAACAGGTGAGCCACTGCTTTCTGCAGGCTGCACAGA 866994863 39236 NM_001553.2(IGFBP7):c.830-1G>A IGFBP7 Aug 12, 2011 MedGen:C4016816 Retinal arterial macroaneurysm with supravascular pulmonic stenosis germline 4 57031337 CTAATTTTTATCTTTTTTTTTTTTTAAACAGGTGAAGGTGCCGAGCTATAAACCTCCAGAA 869025327 223753 NM_000091.4(COL4A3):c.3410G>A (p.Gly1137Asp) COL4A3 Feb 02, 2016 MedGen:C0241908,OMIM:141200,SNOMED CT:236421001 Benign familial hematuria inherited 2 227294562 AAGGCCTCCTGGGCCCTCCAGGAATCAGAGGCCCTCCAGGTTTCATTTTTGTACTTTCTCT 767041069 358303 NM_000520.5(HEXA):c.1330+1G>A HEXA Oct 04, 2016 MedGen:C0039373,OMIM:272800,Orphanet:ORPHA845,SNOMED CT:111385000;MedGen:CN517202 Tay-Sachs disease;not provided germline;unknown 15 72346526 TCTACATAGTGGAACCCCTGGCATTTGAAGGTGAAAGCAGAGAGCTCTCCTTGCTAACCAA 587779434 106866 NM_000090.3(COL3A1):c.2861G>A (p.Gly954Glu) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189004294 CAGGCCCACTTGGGATTGCTGGGATCACTGGAGCACGGGGTCTTGCAGGACCACCAGGCAT 876657728 229705 NM_138691.2(TMC1):c.1676G>A (p.Trp559Ter) TMC1 Jun 04, 2015 MedGen:CN043648,Orphanet:ORPHA87884 Nonsyndromic hearing loss and deafness germline 9 72805491 TTGTGAGGTTTTGCAATTATTGCTGGTGCTGGGACTTGGAGTATGGATATGTAAGTATGAT 72554352 103059 NM_000531.5(OTC):c.316G>A (p.Gly106Arg) OTC - MedGen:CN517202 not provided unknown X 38381359 TTTTTTATTGTAGGCTTTGCACTTCTGGGAGGACATCCTTGTTTTCTTACCACACAAGATA 864309502 215002 NM_007126.3(VCP):c.290G>A (p.Gly97Glu) VCP Jan 01, 2015 MedGen:C4225244,OMIM:616687,Orphanet:ORPHA435387 Charcot-Marie-Tooth disease, axonal, type 2y germline 9 35067903 TTGTTCGGAATAACCTTCGTGTACGCCTAGGGGATGTCATCAGGTGTGTGTGGGGTTTTTG 794728477 407066 NM_000238.3(KCNH2):c.472+1G>A KCNH2 Aug 17, 2015 MedGen:CN517202 not provided germline 7 150959571 GGGGCCCCCCCACCAGCTGGCTGGCCCCAGGTAAGTGTACTTGCTTTAGGGCAGGCTCAGG 104893969 21158 NM_001075098.3(MOCS1):c.956G>A (p.Arg319Gln) MOCS1 Dec 01, 1998 MedGen:C1854988,OMIM:252150,Orphanet:ORPHA308386 Molybdenum cofactor deficiency, complementation group A germline 6 39912289 AGCATTTCTGTGGGACCTGCAACCGCCTGCGAATCACAGCTGATGGGAACCTCAAGGTGAG 786204553 186833 NM_000391.3(TPP1):c.1551+1G>A TPP1 Dec 29, 2015 MedGen:C1876161,OMIM:204500,Orphanet:ORPHA228349;MedGen:CN517202 Ceroid lipofuscinosis neuronal 2;not provided germline;unknown 11 6614865 TACCAGCAGCATGGGGCAGGACTCTTTGATGTAAGTATGGAAGGGAAGGGTGTGGACGTTT 587783645 169012 NM_004004.5(GJB2):c.158G>A (p.Cys53Tyr) GJB2 Feb 08, 2013 Human Phenotype Ontology:HP:0000365,MedGen:C0018772 Hearing impairment germline 13 20189424 TGTGGGGAGATGAGCAGGCCGACTTTGTCTGCAACACCCTGCAGCCAGGCTGCAAGAACGT 201820739 290205 NM_000055.3(BCHE):c.428G>A (p.Gly143Asp) BCHE Dec 23, 2016 MedGen:C1283400,OMIM:177400,Orphanet:ORPHA132,SNOMED CT:360589003 Deficiency of butyrylcholine esterase germline;unknown 3 165830606 AAAATGCCACTGTATTGATATGGATTTATGGTGGTGGTTTTCAAACTGGAACATCATCTTT 796051887 199917 NM_000417.2(IL2RA):c.497G>A (p.Ser166Asn) IL2RA Mar 01, 2013 MedGen:C1853392,OMIM:606367,Orphanet:ORPHA169100 Interleukin 2 receptor, alpha, deficiency of germline 10 6021564 ACAGGGCTCTACACAGAGGTCCTGCTGAGAGCGTCTGCAAAATGACCCACGGGAAGACAAG 121907983 18918 NM_000521.3(HEXB):c.1514G>A (p.Arg505Gln) HEXB Sep 08, 1993 MedGen:C1849320 Sandhoff disease, adult type germline 5 74720648 GGGGGATGTGTGATTTAAATTTTAGGCCTCGGGCAAGTGCTGTTGGTGAGAGACTCTGGAG 121434643 23766 NM_005267.4(GJA8):c.139G>A (p.Asp47Asn) GJA8 Mar 01, 2011 MedGen:C1861828,OMIM:116200 Cataract 1 germline 1 147908094 CTTGGCACGGCCGCAGAGTTCGTGTGGGGGGATGAGCAATCCGACTTCGTGTGCAACACCC -1 439458 NM_002282.3(KRT83):c.1252G>A (p.Glu418Lys) KRT83 Nov 02, 2017 MedGen:C0546966,OMIM:158000,Orphanet:ORPHA573,SNOMED CT:69488000 Beaded hair germline 12 52315903 ATCGCCACCTACAGGCGCCTGCTGGAGGGCGAGGAGCAGAGGTGGGTCCAACCCAGCCCTA 730882241 181401 NM_022786.2(ARV1):c.565G>A (p.Gly189Arg) ARV1 Jan 13, 2015 Human Phenotype Ontology:HP:0000618,MedGen:C0456909;MedGen:C4310762,OMIM:617020;Human Phenotype Ontology:HP:0002180,MedGen:C0027746 Blindness;Epileptic encephalopathy, early infantile, 38;Neurodegeneration germline 1 230995876 CTGCTGAAAGCATTATTATTATCTAGCTACGGAAAACTCTTGCTGATTCCAGCTGTCATTT 28940880 18830 NM_000372.4(TYR):c.616G>A (p.Ala206Thr) TYR Jun 11, 2015 MedGen:C0268494,OMIM:203100,Orphanet:ORPHA79431,SNOMED CT:6483008;MedGen:CN517202 Tyrosinase-negative oculocutaneous albinism;not provided germline 11 89178569 AGAGACATTGATTTTGCCCATGAAGCACCAGCTTTTCTGCCTTGGCATAGACTCTTCTTGT 397515403 48193 NM_020822.2(KCNT1):c.2800G>A (p.Ala934Thr) KCNT1 Oct 27, 2017 MedGen:C3554195,OMIM:614959;MedGen:CN517202 Early infantile epileptic encephalopathy 14;not provided germline 9 135779429 CCTTCCAACATGCGCTTCATGCAGTTCCGCGCCAAGGACAGCTACTCTCTGGCTCTTTCCA 80356553 34260 NM_004385.4(VCAN):c.9265+1G>A VCAN Jan 07, 2016 MedGen:C0339540,OMIM:143200,SNOMED CT:232064001 Wagner syndrome germline 5 83542269 CAGTGGAAGGCACGGCAATCTATTTACCAGGTAAGATCACAACATTGATAAATCTGTTTCC 564185858 243827 NM_016824.4(ADD3):c.1100G>A (p.Gly367Asp) ADD3 Jun 28, 2016 Human Phenotype Ontology:HP:0100021,MedGen:C0007789;MedGen:C4310767,OMIM:617008 Cerebral palsy;Cerebral palsy, spastic quadriplegic, 3 germline 10 110122249 ATATGGGTTCCCATCAAAAATGGAAGGTTGGCGAAATTGAGTTTGAAGGGCTTATGAGGAC 151344623 24127 NM_001287174.1(ABCC8):c.3992-9G>A ABCC8 Jun 05, 2017 MedGen:C3888018,Orphanet:ORPHA276525;MedGen:C1257959,OMIM:256450,SNOMED CT:360339005;MedGen:CN517202 Familial hyperinsulinism;Persistent hyperinsulinemic hypoglycemia of infancy;not provided germline;unknown 11 17397055 TGGCCCATGCCTGGTGGCTGAGCCCAGCCCGGCCCCCAGCACCATCGCTGATCCCAAAGAA 1023002894 481660 NM_003494.3(DYSF):c.1053+5G>A DYSF Nov 03, 2017 MedGen:CN517202 not provided germline 2 71520909 TGCTGGGGCCTGGGGACGAAGCGCCTGTGAGTACATTTCCCTGGGTCTTCCTTACGGTCCC 775683960 444895 NM_000372.4(TYR):c.116G>A (p.Trp39Ter) TYR Jul 17, 2017 MedGen:CN517202 not provided germline 11 89178069 ACCTGATGGAGAAGGAATGCTGTCCACCGTGGAGCGGGGACAGGAGTCCCTGTGGCCAGCT 786200950 172076 NC_012920.1:m.5631G>A MT-TA Dec 15, 2014 Human Phenotype Ontology:HP:0003737,MedGen:C0162670,OMIM:251900,Orphanet:ORPHA206966 Mitochondrial myopathy maternal MT 5631 CCCCACTCTGCATCAACTGAACGCAAATCAGCCACTTTAATTAAGCTAAGCCCTTACTAGA 199473011 78339 NM_000238.3(KCNH2):c.2843G>A (p.Arg948His) KCNH2 Dec 09, 2017 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MedGen:C3150943,OMIM:613688;MedGen:CN517202 Congenital long QT syndrome;Long QT syndrome 2;not provided germline 7 150947728 CTGAGAGCAGTGAGGATGAGGGCCCAGGCCGCAGCTCCAGCCCCCTCCGCCTGGTGCCCTT 267608687 40118 NM_018082.5(POLR3B):c.2303G>A (p.Arg768His) POLR3B Aug 02, 2012 MedGen:C3280644,OMIM:614381 Hypomyelinating leukodystrophy 8, with or without oligodontia and/or hypogonadotropic hypogonadism germline 12 106457147 CCCATCTTGGTTTCATTTTAGGCTTTGGGCGTTGCCTTGTATATAAAAATGCTAAATGTAC 527236100 152799 NM_000539.3(RHO):c.562G>A (p.Gly188Arg) RHO - Human Phenotype Ontology:HP:0000547,MeSH:D012174,MedGen:C0035334,OMIM:268000,Orphanet:ORPHA791,SNOMED CT:28835009 Retinitis pigmentosa not provided 3 129532282 TACATCCCCGAGGGCCTGCAGTGCTCGTGTGGAATCGACTACTACACGCTCAAGCCGGAGG 397514429 36433 NM_000060.4(BTD):c.1613G>A (p.Arg538His) BTD Dec 04, 2012 MedGen:C0220754,OMIM:253260,Orphanet:ORPHA79241,SNOMED CT:8808004 Biotinidase deficiency not provided 3 15645469 CTGGGCTGGTGACGGCGGCTCTCTATGGGCGCTTGTATGAGAGGGACTAGGAAAAGTGTGT 104893815 27550 NM_003242.5(TGFBR2):c.1583G>A (p.Arg528His) TGFBR2 Feb 08, 2017 MedGen:C1860896,OMIM:614331;MedGen:C2697932,Orphanet:ORPHA60030,SNOMED CT:446263001;MedGen:C2674876,OMIM:610168;MedGen:CN517202 Hereditary nonpolyposis colorectal cancer type 6;Loeys-Dietz syndrome;Loeys-Dietz syndrome 2;not provided germline;somatic;unknown 3 30691478 CTGAGTGCTGGGACCACGACCCAGAGGCCCGTCTCACAGCCCAGTGTGTGGCAGAACGCTT 121912694 33157 NM_000341.3(SLC3A1):c.542G>A (p.Arg181Gln) SLC3A1 Apr 01, 1994 Human Phenotype Ontology:HP:0003131,MedGen:C0010691,OMIM:220100,Orphanet:ORPHA214,SNOMED CT:85020001 Cystinuria germline 2 44280827 AAGATTTCAGATATGGTGTTGAAGATTTCCGGGAAGTTGATCCCATTTTTGGAACGATGGA 886039565 259983 NM_207122.1(EXT2):c.539G>A (p.Trp180Ter) EXT2 Feb 08, 2016 MedGen:CN517202 not provided germline 11 44109196 TTCTCCTACATTTTAAATTTCTTGACAGGTGGGATCGAGGTACGAATCACCTGTTGTTCAA -1 468530 NM_001127221.1(CACNA1A):c.1082+1G>A CACNA1A Jul 20, 2017 MedGen:C4310716,OMIM:617106;MedGen:C1720416,OMIM:108500,Orphanet:ORPHA97,SNOMED CT:420932006 Epileptic encephalopathy, early infantile, 42;Episodic ataxia type 2 germline 19 13335805 GCTGAACCTTGTGCTGGGTGTGCTGTCAGGGTAAGTTTCTGCTACTCCCCACCCCATCCCA 61759861 24307 NM_001038.5(SCNN1A):c.340G>A (p.Val114Ile) SCNN1A Jul 01, 2009 MedGen:C2751666,OMIM:613021 Bronchiectasis with or without elevated sweat chloride 2 germline 12 6374444 CTGCTTTTCGGAGAGTACTTCAGCTACCCCGTCAGCCTCAACATCAACCTCAACTCGGACA -1 488087 NM_000799.3(EPO):c.530G>A (p.Arg177Gln) EPO Mar 16, 2018 MedGen:CN873436,OMIM:617911 DIAMOND-BLACKFAN ANEMIA-LIKE germline 7 100723081 AACTCTTCCGAGTCTACTCCAATTTCCTCCGGGGAAAGCTGAAGCTGTACACAGGGGAGGC 886037734 178781 NM_001195422.1(GTPBP3):c.1441G>A (p.Glu481Lys) GTPBP3 Dec 04, 2014 MedGen:C4015447,OMIM:616198,Orphanet:ORPHA444013 Combined oxidative phosphorylation deficiency 23 germline 19 17341599 AAGCAGTCAAAAGACCTGGCCCTGGCGGCAGAGGCGCTGCGGGTGGCCCGGGGTCACCTGA 1057519434 362143 NM_005654.5(NR2F1):c.413G>A (p.Cys138Tyr) NR2F1 - MedGen:C3810363,OMIM:615722,Orphanet:ORPHA401777 Bosch-Boonstra-Schaaf optic atrophy syndrome de novo 5 93585436 GTCCCATCGACCAGCACCACCGCAACCAGTGCCAATACTGCCGCCTCAAGAAGTGCCTCAA 137854616 24438 NM_000335.4(SCN5A):c.3781G>A (p.Gly1261Ser) SCN5A Jan 01, 2004 MedGen:C1142166,Orphanet:ORPHA130,SNOMED CT:418818005;MedGen:CN029323,OMIM:601144 Brugada syndrome;Brugada syndrome 1 germline 3 38566465 CTGGAGATGCTGCTCAAGTGGGTGGCCTACGGCTTCAAGAAGTACTTCACCAATGCCTGGT 104894296 22394 NM_006918.4(SC5D):c.632G>A (p.Gly211Asp) SC5D Oct 01, 2002 MedGen:C1846421,OMIM:607330,Orphanet:ORPHA46059 Lathosterolosis germline 11 121307244 TTAATATCTGGACAATTTCCATTCATGACGGTGATTTTCGTGTCCCCCAAATCTTACAGCC 63750582 96584 NM_000251.2(MSH2):c.490G>A (p.Gly164Arg) MSH2 Apr 22, 2014 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Hereditary cancer-predisposing syndrome;Lynch syndrome germline 2 47410217 GCAGTTGATGGCCAGAGACAGGTTGGAGTTGGGTATGTGGATTCCATACAGAGGAAACTAG 104893917 19129 NM_000112.3(SLC26A2):c.764G>A (p.Gly255Glu) SLC26A2 Feb 01, 1996 MedGen:C1850554,OMIM:256050,Orphanet:ORPHA56304 Atelosteogenesis type 2 germline 5 149980357 CTGTCTACCTCTCAGATGCCTTGCTGAGTGGATTTGTCACTGGTGCCTCCTTCACTATTCT 886041505 265019 NM_018896.4(CACNA1G):c.2881G>A (p.Ala961Thr) CACNA1G May 17, 2017 MedGen:CN517202 not provided germline 17 50592063 GGCAACTACGTGCTCTTCAATTTGCTGGTCGCCATTCTGGTGGAGGGCTTCCAGGCGGAGG 1057518940 361051 NM_000540.2(RYR1):c.7111G>A (p.Glu2371Lys) RYR1 Apr 01, 2014 Human Phenotype Ontology:HP:0002803,MedGen:C0332878;Human Phenotype Ontology:HP:0002194,MedGen:C1837658;Human Phenotype Ontology:HP:0007126,MedGen:C1850794;Human Phenotype Ontology:HP:0004322,MedGen:C0349588 Congenital contracture;Delayed gross motor development;Proximal amyotrophy;Short stature unknown 19 38499718 CCTGAGTGCTTCGGACCCGCCCTGCGGGGTGAGGGTGGCTCAGGGCTGCTGGCTGCCATCG 3733402 27076 NM_000892.4(KLKB1):c.428G>A (p.Ser143Asn) KLKB1 Jul 01, 2007 MedGen:C0272339,OMIM:612423,Orphanet:ORPHA749,SNOMED CT:48976006 Prekallikrein deficiency germline 4 186236880 GTGTTGAAGAATGCCAAAAAAGGTGCACCAGTAACATTCGCTGCCAGTTTTTTTCATATGC 747606537 434166 NM_000384.2(APOB):c.10768G>A (p.Glu3590Lys) APOB - MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 2 21006100 AACGGAGAACATACAAGCAAAGCCACCCTGGAACTCTCTCCATGGCAAATGTCAGCTCTTG -1 441157 NM_000089.3(COL1A2):c.1666G>A (p.Gly556Ser) COL1A2 Mar 08, 2017 MedGen:CN517202 not provided germline 7 94414222 ATTGAGATTTGTATTTCTTTTCATTTTTAGGGTCTGCCTGGCCCCTCAGGTCCCGCTGGTG 104893759 28645 NM_001122757.2(POU1F1):c.506G>A (p.Arg169Gln) POU1F1 Dec 15, 1992 MedGen:C2751608,OMIM:613038 Pituitary hormone deficiency, combined 1 germline 3 87264299 AAAAGTTTGCCAATGAATTTAAAGTGAGACGAATTAAATTAGGTATGTGCTTGTTAAAGGC 1085307229 414165 NM_001204.6(BMPR2):c.418+5G>A BMPR2 - MedGen:C0152171,OMIM:178600,SNOMED CT:26174007 Primary pulmonary hypertension germline 2 202467694 TCCACCTCCTGACACAACACCACTCAGTAAGTAAAGTAACCAACTTTTCTTTGTATTTCCT 121918607 27991 NM_001161766.1(AHCY):c.252G>A (p.Trp84Ter) AHCY Mar 23, 2004 MedGen:C3151058,OMIM:613752,Orphanet:ORPHA88618 Hypermethioninemia with s-adenosylhomocysteine hydrolase deficiency germline 20 34292467 GAAGGGCGAAACGGACGAGGAGTACCTGTGGTGCATTGAGCAGACCCTGTACTTCAAGGAC 267606879 16092 NM_022489.3(INF2):c.641G>A (p.Arg214His) INF2 Jan 01, 2010 MedGen:C2750475,OMIM:613237 Focal segmental glomerulosclerosis 5 germline 14 104703428 TCATCTTGGGCCCCGAGGACCTGCGCGCGCGCACCCAGCTGCGGAACGAGTTTATCGGTAA 780209390 178855 NM_198721.3(COL25A1):c.1144G>A (p.Gly382Arg) COL25A1 Jan 08, 2015 MedGen:C4015552,OMIM:616219 Fibrosis of extraocular muscles, congenital, 5 germline 4 108863327 AGAGGTGAGCGAGGGGAACCTGGAGCCCCCGGACCAAAGGTGAGTTATTCTTAAACTGGAA 1085307584 415769 NM_000444.5(PHEX):c.1880G>A (p.Trp627Ter) PHEX Apr 19, 2017 MedGen:CN517202 not provided germline X 22221724 GCATGATTAACCAGTATAGCAACTATTATTGGAAGAAAGCTGGCTTAAATGTGAGTACAAC 863223904 212029 NM_000032.4(ALAS2):c.1355G>A (p.Arg452His) ALAS2 Apr 10, 2014 MedGen:CN517202 not provided germline X 55014829 AGGGCCAAGCCCTGAGGCGAGCCCACCAGCGCAATGTCAAGCACATGCGCCAGCTACTCAT 281874743 36098 NM_000495.4(COL4A5):c.4688G>A (p.Arg1563Gln) COL4A5 Jun 29, 2017 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917;MedGen:CN517202 Alport syndrome, X-linked recessive;not provided germline X 108692925 AGGGCCAGAGCATCCAGCCATTCATTAGTCGGTAAGGCATTGATTTAGCTGTGACTTTTAC 1114167621 416972 NM_000314.6(PTEN):c.210-1G>A PTEN Sep 12, 2017 MedGen:CN072330,OMIM:158350;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Cowden syndrome 1;Hereditary cancer-predisposing syndrome;not provided germline 10 87931045 ACTTTATATCACTTTTAAACTTTTCTTTTAGTTGTGCTGAAAGACATTATGACACCGCCAA 111033573 19657 NM_021830.4(TWNK):c.1075G>A (p.Ala359Thr) TWNK Apr 07, 2017 MedGen:C1836439,OMIM:609286;MedGen:C0751651,Orphanet:ORPHA68380 Autosomal dominant progressive external ophthalmoplegia with mitochondrial DNA deletions 3;Mitochondrial diseases germline 10 100989285 GGCTTCAATCTTTCTCGTATTCTTCGTACCGCCCTGCCTGCCTGGCACAAGTCCATCGTAT 387906939 39534 NM_014762.3(DHCR24):c.281G>A (p.Arg94His) DHCR24 Jul 01, 2011 MedGen:C1865596,OMIM:602398,Orphanet:ORPHA35107 Desmosterolosis germline 1 54883724 AGGGTAGCAAGACCTTCATGTGCACGGGGCGCCCTGGCTGGCTCACTGTCTCACTACGTGT 1060501420 459304 NM_000118.3(ENG):c.782G>A (p.Trp261Ter) ENG Jun 19, 2017 MedGen:C0039445,OMIM:187300,Orphanet:ORPHA774,SNOMED CT:21877004 Osler hemorrhagic telangiectasia syndrome germline 9 127825265 TCATCCTGCAGGGTCCCCCCTACGTGTCCTGGCTCATCGACGCCAACCACAACATGCAGAT 483352913 94409 NM_001110.3(ADAM10):c.1511G>A (p.Ser504Asn) ADAM10 Sep 01, 2013 MedGen:C0406811,OMIM:615537,Orphanet:ORPHA178307,SNOMED CT:239133004 Reticulate acropigmentation of Kitamura germline 15 58621471 AATGCAAACTGAAACCTGGGAAACAGTGCAGGTACCTTGCTAATTTCAGTGATGTTAACAT 121912867 32396 NM_001844.4(COL2A1):c.2320G>A (p.Gly774Ser) COL2A1 Mar 02, 2017 MedGen:C0542428,Orphanet:ORPHA93297 Hypochondrogenesis germline 12 47982142 CTCTTCCCTCAGGGTGACGTTGGTGAGAAAGGCCCTGAGGGAGCCCCTGGAAAGGATGGTG 33946267 30331 NM_000518.4(HBB):c.364G>A (p.Glu122Lys) HBB Jun 26, 2017 na;na;na;MedGen:C0002895,OMIM:603903,Orphanet:ORPHA232,SNOMED CT:127040003;MedGen:C1264000,SNOMED CT:127048005;MedGen:C1264000,SNOMED CT:127048005;MedGen:C0005283,OMIM:613985,Orphanet:ORPHA848,SNOMED CT:65959000;MedGen:CN517202;MedGen:CN169374 HEMOGLOBIN EGYPT;HEMOGLOBIN O (ARAB);HEMOGLOBIN O (TIBESTI);Hb SS disease;Sickle cell-Hemoglobin O Arab disease;Sickle cell-Hemoglobin O Arab disease;beta Thalassemia;not provided;not specified germline 11 5225678 GTCTGTGTGCTGGCCCATCACTTTGGCAAAGAATTCACCCCACCAGTGCAGGCTGCCTATC 398122893 48055 NM_001111.4(ADAR):c.2608G>A (p.Ala870Thr) ADAR Jun 27, 2013 MedGen:C3539013,OMIM:615010 Aicardi-goutieres syndrome 6 germline 1 154589817 CAGCCCTCCTTGCTCGGCCGCAAGATTCTGGCCGCCATCATTATGAAAAAAGACTCTGAGG 121912923 32264 NM_000090.3(COL3A1):c.1744G>A (p.Gly582Ser) COL3A1 Dec 21, 2016 MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000;MedGen:CN517202 Ehlers-Danlos syndrome, type 4;not provided germline 2 188996479 CGAGGTCAGCCTGGTGTCATGGGCTTCCCCGGTCCTAAAGGAAATGATGTGAGTTCCTTCA 863223317 39684 NM_022137.5(SMOC1):c.664+1G>A SMOC1 Jan 07, 2011 MedGen:C0599973,OMIM:206920 Anophthalmos with limb anomalies germline 14 69994481 AACTGAACAACACCAACATAAGAAATTCAGGTAAATAACCTTCCTTGGATTATATATGTAC 118203975 16040 NM_152778.2(MFSD8):c.929G>A (p.Gly310Asp) MFSD8 Mar 01, 2009 MedGen:C1838571,OMIM:610951,Orphanet:ORPHA228366 Ceroid lipofuscinosis neuronal 7 germline 4 127930752 GGACTCAAGAACAAGCTGTGTTATATAATGGCATAATACTTGCTGCTCTTGGGGTTGAAGC 730880584 179221 NM_000256.3(MYBPC3):c.2995-1G>A MYBPC3 May 24, 2017 MedGen:CN517202 not provided germline 11 47333753 AGGTTCAGGGTTAAGCTTTTCCTCCCCTCAGGGCAAGCCCCGGCCTCAGGTGACCTGGACC 147222357 29775 NM_000213.4(ITGB4):c.3793+1G>A ITGB4 May 25, 2016 MedGen:C1856934,OMIM:226730,Orphanet:ORPHA79403;MedGen:CN517202 Epidermolysis bullosa junctionalis with pyloric atresia;not provided germline 17 75751112 TCTGCTATGGCCTGGTCAACGATGACAACCGTAAGAACCAGATCCTTCTTTCCTGCCCACA 1131690902 420514 NM_000321.2(RB1):c.380+1G>A RB1 Jan 27, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 13 48342715 TACTGAGCTACAGAAAAACATAGAAATCAGGTAAAGTTTCTTGTATAAATATAAGCCTCTG 1114167414 413965 NM_000089.3(COL1A2):c.3008G>A (p.Gly1003Asp) COL1A2 - MedGen:C0268362,OMIM:259420,Orphanet:ORPHA216812,SNOMED CT:385483009 Osteogenesis imperfecta type III unknown 7 94426433 ATCCTTCTGTTTCTTTATAGGGCCCACAAGGCATTCGTGGCGATAAGGGAGAGCCCGGTGA 111033247 55164 NM_022124.5(CDH23):c.6049+1G>A CDH23 Jan 24, 2007 MedGen:C1832845,OMIM:601067 Usher syndrome, type 1D germline 10 71790414 GTGGCCTCTTTGACATCAACAGCAGCACCGGTGAGGCCTCTGTGCCACCCAGCACTCCCAG 869025214 214870 NM_017662.4(TRPM6):c.2667+1G>A TRPM6 Sep 01, 2013 MedGen:C1865974,OMIM:602014,Orphanet:ORPHA30924 Hypomagnesemia 1, intestinal germline 9 74788613 TTCACCAATGCTATTGAGGTGGTCAGGGAGGTGAGTTATGCCATCTACCTTTATCTTCTGC 121912928 32250 NM_000090.3(COL3A1):c.1655G>A (p.Gly552Glu) COL3A1 Mar 09, 2000 MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188996171 CAGGAGGACCAGGAAGTGATGGGAAACCAGGGCCTCCCGTATGTACATTTTTAAAATCTCA 111033780 36614 NM_000155.3(GALT):c.871G>A (p.Glu291Lys) GALT Dec 04, 2012 MedGen:C0268151,OMIM:230400,Orphanet:ORPHA79239,SNOMED CT:124354006 Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase not provided 9 34649048 AAGCTCTTGACCAAGTATGACAACCTCTTTGAGACGTCCTTTCCCTACTCCATGGGCTGGC 267606625 29345 NM_013227.3(ACAN):c.7249G>A (p.Val2417Met) ACAN Feb 12, 2010 Human Phenotype Ontology:HP:0010886,MedGen:C0029421,OMIM:165800,Orphanet:ORPHA2764,SNOMED CT:82562007 Osteochondritis dissecans germline 15 88872941 GACAACTTTTTTGCCGCTGGAGAGGACTGTGTGGTGATGATCTGGCACGAGAAGGGCGAGT 80358030 131419 NM_007294.3(BRCA1):c.547+1G>A BRCA1 Aug 03, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome germline;unknown 17 43099774 CTCAAAAGACGTCTGTCTACATTGAATTGGGTAAGGGTCTCAGGTTTTTTAAGTATTTAAT 786205665 190037 NM_178454.5(DRAM2):c.131G>A (p.Ser44Asn) DRAM2 May 12, 2015 MedGen:CN231743,OMIM:616502;Human Phenotype Ontology:HP:0000556,MedGen:C0854723,Orphanet:ORPHA71862,SNOMED CT:314407005 Cone-rod dystrophy 21;Retinal dystrophy germline 1 111131424 ACCATATAGACCCGGCTTTACCTTATATCAGGTAAGTGAAATGTATTCTTTGTATAGGAGA 267606734 21081 NM_004273.4(CHST3):c.1114G>A (p.Glu372Lys) CHST3 Jun 01, 2008 MedGen:C1840471,OMIM:143095 Spondyloepiphyseal dysplasia with congenital joint dislocations germline 10 72008145 CTGCGGGGCCGCTACATGCTGGTGCGCTACGAGGACGTGGCACGCGGGCCGCTGCAGAAGG 1060500629 398597 NM_000218.2(KCNQ1):c.1175G>A (p.Trp392Ter) KCNQ1 Sep 08, 2016 MeSH:D008133,MedGen:C0023976,SNOMED CT:9651007 Long QT syndrome germline 11 2587616 ATGCTGCCGAGAACCCCGACTCCTCCACCTGGAAGATCTACATCCGGAAGGCCCCCCGGAG 189234741 431798 NM_001297.4(CNGB1):c.413-1G>A CNGB1 Jan 01, 2015 Human Phenotype Ontology:HP:0000547,MeSH:D012174,MedGen:C0035334,OMIM:268000,Orphanet:ORPHA791,SNOMED CT:28835009 Retinitis pigmentosa unknown 16 57962611 GACTGCCTTTCTGTATTTTCTGACCCTGCAGGGTGCACAGATGAACCCAATGAGGCCCTTG 80357468 68802 NM_007294.3(BRCA1):c.1116G>A (p.Trp372Ter) BRCA1 Sep 08, 2016 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline;somatic 17 43094415 GAATCCTAGAGATACTGAAGATGTTCCTTGGATAACACTAAATAGCAGCATTCAGAAAGTT 769301934 172294 NM_198586.2(NHLRC1):c.436G>A (p.Asp146Asn) NHLRC1 Feb 17, 2017 MedGen:C0751783,OMIM:254780,Orphanet:ORPHA501,SNOMED CT:230425004;MedGen:CN517202 Lafora disease;not provided germline 6 18122171 CCCAAGACGGGGCGTGTCGTGGTGGTGCACGACGGCAGGAGGCGTGTCAAGATTTTTGACT 80356542 19669 NM_021830.4(TWNK):c.952G>A (p.Ala318Thr) TWNK Jul 22, 2010 MedGen:C1849096,OMIM:271245,Orphanet:ORPHA1186 Mitochondrial DNA depletion syndrome 7 (hepatocerebral type) germline 10 100989162 TTGGGGGATGACCTTCGGTCCTGGGAAGCCGCCAAGTTGTTTGCACGAAAACTGAACCCCA 121908199 79629 NM_000391.3(TPP1):c.1166G>A (p.Gly389Glu) TPP1 May 24, 2017 MedGen:C1876161,OMIM:204500,Orphanet:ORPHA228349;MedGen:C0027877,OMIM:214200,Orphanet:ORPHA216,SNOMED CT:42012007 Ceroid lipofuscinosis neuronal 2;Neuronal ceroid lipofuscinosis germline 11 6615542 CTCCCCTCAGCCCCTATGTCACCACAGTGGGAGGCACATCCTTCCAGGAACCTTTCCTCAT 113403872 16550 NM_000298.5(PKLR):c.1529G>A (p.Arg510Gln) PKLR Jun 14, 2016 MedGen:C1849472,OMIM:266200;MedGen:CN517202 Pyruvate kinase deficiency of red cells;not provided germline 1 155291845 CCCAGGCTGCCCGCCAGGTCCACTTATGCCGAGGAGTCTTCCCCTTGCTTTACCGTGAACC 104894967 24784 NM_003140.2(SRY):c.320G>A (p.Trp107Ter) SRY Aug 01, 1994 MedGen:C2748896,OMIM:400044 46,XY sex reversal, type 1 germline Y 2787284 AGTGGAAAATGCTTACTGAAGCCGAAAAATGGCCATTCTTCCAGGAGGCACAGAAATTACA 63749810 33140 NM_000484.3(APP):c.2080G>A (p.Asp694Asn) APP Mar 25, 2003 MedGen:C2751536,OMIM:605714;MedGen:CN517202 Cerebral amyloid angiopathy, APP-related;not provided germline 21 25891853 TAATTTGTTTTCAAGGTGTTCTTTGCAGAAGATGTGGGTTCAAACAAAGGTGCAATCATTG 199472978 78244 NM_000238.3(KCNH2):c.1969G>A (p.Gly657Ser) KCNH2 May 08, 2017 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MeSH:D008133,MedGen:C0023976,SNOMED CT:9651007 Congenital long QT syndrome;Long QT syndrome germline 7 150951097 CCCCCAGCCCTCATGTATGCTAGCATCTTCGGCAACGTGTCGGCCATCATCCAGCGGCTGT 750079325 427977 NM_024989.3(PGAP1):c.927+1G>A PGAP1 Feb 03, 2017 MedGen:C4014343,OMIM:615802 Mental retardation, autosomal recessive 42 germline 2 196897130 TTTGATCTTATTGATGCTGATACTAAACAAGTATGTATTTTTAAACTAAAAATTATTTAAA 863225327 214652 NM_000038.5(APC):c.221-1G>A APC Jul 19, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline;unknown 5 112767188 TTGTATAAAAACTTGTTTCTATTTTATTTAGAGCTTAACTTAGATAGCAGTAATTTCCCTG 118192183 76856 NM_000540.2(RYR1):c.14696G>A (p.Gly4899Glu) RYR1 May 11, 2010 MedGen:C0751951,OMIM:117000,Orphanet:ORPHA597,SNOMED CT:43152001;MedGen:CN517202 Central core disease;not provided unknown 19 38584992 ACGTGGGTGTCCGGGCTGGCGGAGGCATTGGGGACGAGATCGAGGACCCCGCGGGTGACGA 878854691 242448 NM_004360.4(CDH1):c.3G>A (p.Met1Ile) CDH1 Jul 26, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1708349,OMIM:137215,Orphanet:ORPHA26106 Hereditary cancer-predisposing syndrome;Hereditary diffuse gastric cancer germline 16 68737418 TGCCCTCGCTCGGCGTCCCCGGCCAGCCATGGGCCCTTGGAGCCGCAGCCTCTCGGCGCTG -1 481740 NM_023073.3(CPLANE1):c.702G>A (p.Trp234Ter) CPLANE1 Dec 05, 2017 MedGen:CN517202 not provided germline 5 37239845 TTTTAGATCATTGCCATACCATGTTCATTGGGCTCAACAAGACTGTCATCTCTGTAGTTTA 794726800 187735 NM_001165963.1(SCN1A):c.4811G>A (p.Trp1604Ter) SCN1A Dec 20, 2014 MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002 Severe myoclonic epilepsy in infancy de novo 2 165994187 CTCTACGCCATTATTATTTTACCATTGGATGGAATATTTTTGATTTTGTGGTTGTCATTCT 387906838 39220 NM_004722.3(AP4M1):c.577G>A (p.Glu193Lys) AP4M1 Sep 21, 2011 MedGen:C2752008,OMIM:612936 Spastic paraplegia 50, autosomal recessive germline 7 100104125 CAAAAGAATGAAGTTTTTTTGGATGTGGTCGAGAGATTGTCTGTACTGATAGCATCTAATG 140984555 190167 NM_001003811.1(TEX11):c.2092G>A (p.Ala698Thr) TEX11 May 28, 2015 Gene:100820759,MedGen:C1839841,OMIM:309120 Spermatogenic failure, X-linked, 2 germline X 70605421 GTTGCAGTTGATCTAGAGCAAGGGAGAAAAGCTTCAACAGCTTTTGAACAGGTAATGTGCA 104894182 28753 NM_001083116.2(PRF1):c.836G>A (p.Cys279Tyr) PRF1 Dec 03, 1999 MedGen:C1863727,OMIM:603553 Hemophagocytic lymphohistiocytosis, familial, 2 germline 10 70598885 ACGGCAGCATCTCTGCCGAAGCCAAGGCCTGTGAGGAGAAGAAGAAGAAGCACAAGATGAC 28940276 17773 NM_004183.3(BEST1):c.25G>A (p.Val9Met) BEST1 Sep 01, 1998 MedGen:C0339510,OMIM:153700,Orphanet:ORPHA1243,SNOMED CT:90036004;MedGen:CN517202 Vitelliform macular dystrophy type 2;not provided germline 11 61951831 CTGGCCATGACCATCACTTACACAAGCCAAGTGGCTAATGCCCGCTTAGGCTCCTTCTCCC 120074122 18026 NM_000543.4(SMPD1):c.730G>A (p.Gly244Arg) SMPD1 Jan 01, 1992 MedGen:C0268243,OMIM:607616,Orphanet:ORPHA77293,SNOMED CT:39390005 Niemann-Pick disease, type B germline 11 6391795 GGCCTGCCGCCCGCATCCCGGCCAGGTGCCGGATACTGGGGCGAATACAGCAAGTGTGACC 515726180 136325 NM_015713.4(RRM2B):c.48G>A (p.Glu16=) RRM2B Apr 07, 2017 MedGen:C0751651,Orphanet:ORPHA68380;MedGen:CN187502 Mitochondrial diseases;RRM2B-related mitochondrial disease germline 8 102238827 GCCGGAAGCGGCCGGGCTGGATCAGGATGAGGTAAATGTTGCTGTTGCGTCTTCCCCCTCA 797045840 207280 NM_002538.3(OCLN):c.1037+5G>A OCLN Mar 19, 2015 MedGen:C3489725,OMIM:251290 Band-like calcification with simplified gyration and polymicrogyria germline 5 69534844 CCAGAGTCTTCCTATAAATCCACGCCGTAAGTAGCATCTCTCTTAGTTTGATAGACTGAGT 916512411 359543 NM_000094.3(COL7A1):c.7078G>A (p.Gly2360Arg) COL7A1 Jul 26, 2016 MedGen:CN517202 not provided germline 3 48571269 CTGTTTGCTGGGTTTTCTTAGGGTCAGAAAGGGGCTCCAGGACCCAAAGGTTTCAAGGTAT 1057519389 263783 NM_001005463.2(EBF3):c.488G>A (p.Arg163Gln) EBF3 Feb 27, 2017 Human Phenotype Ontology:HP:0010867,MedGen:C0004134,SNOMED CT:20262006;Human Phenotype Ontology:HP:0002474,MedGen:C1847610;MedGen:C0557874;MedGen:C4310618,OMIM:617330;Human Phenotype Ontology:HP:0001249,MedGen:C1843367;Human Phenotype Ontology:HP:0001252,MedGen:C0026827 Ataxia;Expressive language delay;Global developmental delay;Hypotonia, ataxia, and delayed development syndrome;Intellectual disability;Muscular hypotonia de novo;germline 10 129957324 AAAACCACTGTTTACAATTGCTCCACAGCCGGTGCTGTGACAAGAAAAGTTGTGGCAATAG 75398746 25833 NM_024921.3(POF1B):c.986G>A (p.Arg329Gln) POF1B Jul 01, 2006 MedGen:C1845105,OMIM:300604 Premature ovarian failure 2b germline X 85308188 AGATGAGGGGTATGTCTGATAAGTCACTCCGACTAGTGCTGTCCACATTTAGCAACATACG 764160563 244113 NM_198576.3(AGRN):c.5023G>A (p.Gly1675Ser) AGRN Jul 14, 2016 MedGen:C0751882,Orphanet:ORPHA590 Congenital myasthenic syndrome germline 1 1050473 GAGGTCGTGTTCCTGGCACGAGGCCCCAGCGGCCTCCTGCTCTACAACGGGCAGAAGACGG 386833889 71086 NM_004646.3(NPHS1):c.1715G>A (p.Ser572Asn) NPHS1 Mar 03, 2017 MedGen:C0403399,OMIM:256300,Orphanet:ORPHA839,SNOMED CT:197601003;MedGen:CN517202 Finnish congenital nephrotic syndrome;not provided germline 19 35845711 CCTTAAACTTGACATGCGTCAGCGTCAGCAGCAATCCGCCGGTCAACTTGTCCTGGGACAA 121434529 33201 NM_000262.2(NAGA):c.973G>A (p.Glu325Lys) NAGA Mar 29, 2017 na;MedGen:C1836544,OMIM:609241,Orphanet:ORPHA79279;MedGen:CN517202 Alpha-N-acetylgalactosaminidase deficiency;Schindler disease, type 1;not provided germline 22 42061052 ACCTTCTGTGCCCAGGAAAAATCTCTCATCGAAGTGTACATGCGGCCTCTGTCCAACAAGG 1064794064 408491 NM_012193.3(FZD4):c.611G>A (p.Cys204Tyr) FZD4 Aug 27, 2015 MedGen:CN517202 not provided germline 11 86952145 TGAAAAGGAGCCTGAACTGTGTGCTCAAGTGTGGCTATGATGCTGGCTTATACAGCCGCTC 606231471 171286 NM_004826.3(ECEL1):c.2023G>A (p.Ala675Thr) ECEL1 Dec 05, 2014 MedGen:C3554415,OMIM:615065,Orphanet:ORPHA329457 Arthrogryposis, distal, type 5d germline;inherited 2 232481123 AACGGGAAACACACGCTTGGGGAGAACATCGCAGATATGGGCGGCCTCAAGCTGGCCTACC 863225313 427258 NM_000038.5(APC):c.1409-1G>A APC Jan 23, 2013 MedGen:CN240755 Familial adenomatous polyposis germline 5 112827107 TGTCTTTTTCCTCTTGCCCTTTTTAAATTAGGGGGACTACAGGCCATTGCAGAATTATTGC 387907303 45848 NM_003036.3(SKI):c.347G>A (p.Gly116Glu) SKI Nov 01, 2012 MedGen:C1321551,OMIM:182212,SNOMED CT:83092002 Shprintzen-Goldberg syndrome de novo;germline 1 2229113 AAGGCGAGACCATCTCGTGCTTCGTGGTGGGAGGCGAGAAGCGCCTGTGTCTGCCGCAGAT 1060503336 394257 NM_000038.5(APC):c.2096G>A (p.Trp699Ter) APC Jun 02, 2016 MedGen:C2713442,OMIM:175100;MedGen:C0027672,SNOMED CT:699346009 Familial adenomatous polyposis 1;Hereditary cancer-predisposing syndrome germline 5 112837690 CAAGAAATCCTAAAGACCAGGAAGCATTATGGGACATGGGGGCAGTTAGCATGCTCAAGAA -1 425564 NM_000094.3(COL7A1):c.6164G>A (p.Gly2055Glu) COL7A1 Mar 18, 2016 MedGen:CN517202 not provided germline 3 48575355 CAGGCAGGGCTGGGGGTGTGGGAGAGGCAGGAAGGCCAGGAGAGAGGGTGAGGCTGGGGGC 267607649 77794 NM_170707.3(LMNA):c.412G>A (p.Glu138Lys) LMNA Oct 24, 2016 MedGen:CN517202 not provided germline 1 156130672 ATAGCTGCTCAGGCTCGGCTGAAGGACCTGGAGGCTCTGCTGAACTCCAAGGAGGCCGCAC 142173735 94569 NM_006514.3(SCN10A):c.3910G>A (p.Ala1304Thr) SCN10A Nov 20, 2012 MedGen:C3809893,OMIM:615551 Episodic pain syndrome, familial, 2 germline 3 38712340 ATCTTCAGCATCATGGGTGTGAACCTCTTCGCAGGGAAGTTTTGGAGGTGCATCAACTATA 121434227 18454 NM_006147.3(IRF6):c.251G>A (p.Arg84His) IRF6 Apr 10, 2017 MedGen:C0265259,OMIM:119500,SNOMED CT:66783006;MedGen:CN517202 Popliteal pterygium syndrome;not provided germline 1 209796476 CTGACCCAGCTAAATGGAAGGCCCAGCTGCGCTGTGCTCTCAATAAGAGCAGAGAATTCAA 755221106 223669 NM_018896.4(CACNA1G):c.5144G>A (p.Arg1715His) CACNA1G Jun 02, 2016 na;MedGen:C4225205,OMIM:616795,Orphanet:ORPHA458803 CACNA1G-related disorders;Spinocerebellar ataxia 42 germline;unknown 17 50617560 CCACCATCATCCGCATCATGAGGGTGCTGCGCATTGCCCGAGGTTGGTGCCCAGCCCACGC 59332535 77828 NM_170707.3(LMNA):c.746G>A (p.Arg249Gln) LMNA Jun 29, 2017 MedGen:C0410190,OMIM:181350,Orphanet:ORPHA98853,SNOMED CT:240072005;MedGen:CN043576;MedGen:C1449563,OMIM:115200,Orphanet:ORPHA300751;MeSH:D009136,MedGen:C0026850,Orphanet:ORPHA98473;MedGen:CN517202 Benign scapuloperoneal muscular dystrophy with cardiomyopathy;Charcot-Marie-Tooth disease, type 2;Dilated cardiomyopathy 1A;Muscular dystrophy;not provided germline 1 156134911 GCCGGCTGGCGGATGCGCTGCAGGAACTGCGGGCCCAGCATGAGGACCAGGTGGAGCAGTA 375934856 263874 NM_030813.5(CLPB):c.1915G>A (p.Glu639Lys) CLPB Sep 14, 2016 MedGen:C4225393,OMIM:616271,Orphanet:ORPHA445038 3-methylglutaconic aciduria with cataracts, neurologic involvement, and neutropenia germline 11 72293576 CGTGTGGTGAACCAGCTGGCAGCAGCCTATGAGCAGGACCTGCTGCCAGGGGGCTGTACTT 121918717 27523 NM_000359.2(TGM1):c.968G>A (p.Arg323Gln) TGM1 Sep 07, 2017 MedGen:C3536797,OMIM:242300;MedGen:CN517202 Autosomal recessive congenital ichthyosis 1;not provided germline 14 24259720 GAGGCCGTGGAGACCCAGTCAATGTCTCCCGGGTCATCTCTGCCATGGTGAGCACCCTCAC 104886195 35908 NM_000495.4(COL4A5):c.2804G>A (p.Gly935Asp) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108622712 ATGGCTTGCAGGGTCAGCCAGGACTTCCTGGCCCTACAGGAGAAAAAGGTAGTAAAGGAGA 61752401 104993 NM_000350.2(ABCA4):c.1937+1G>A ABCA4 Jan 25, 2016 MeSH:C535804,MedGen:C1855465,OMIM:248200;MedGen:CN517202 Stargardt disease 1;not provided germline;unknown 1 94062576 GATGCCCTACCCCTGCTTCGTGGACGATTCGTGAGTCTGAAGTTCGCGATCCTCCTCCATG 397514262 75589 NM_005235.2(ERBB4):c.2780G>A (p.Arg927Gln) ERBB4 Nov 07, 2013 MedGen:C3715155,OMIM:615515;MedGen:CN517202 Amyotrophic lateral sclerosis 19;not provided germline 2 211424241 GAGGAAAACCCTATGATGGAATTCCAACGCGAGAAATCCCTGATTTATTAGAGAAAGGAGA 863225200 214303 NM_019892.5(INPP5E):c.1154G>A (p.Cys385Tyr) INPP5E Feb 23, 2015 Human Phenotype Ontology:HP:0002335,MedGen:C0431399,Orphanet:ORPHA475,SNOMED CT:253175003,SNOMED CT:716997004 Joubert syndrome unknown 9 136433160 TCTTCATCCGCAGGGACCTCATCTGGTTCTGCTCAGGTGGGCGCGGCTGGAGGGGTGGGCG 587777152 106635 NM_012233.2(RAB3GAP1):c.899+1G>A RAB3GAP1 Nov 24, 2015 MedGen:C1838625,OMIM:600118;MedGen:CN517202 Warburg micro syndrome 1;not provided germline 2 135126250 AGGGATCATTGTGGATAATGATGTTTATTCGTAAGTATGTTAAGAGTAGTAGTACACTGAG 786204796 187138 NM_032790.3(ORAI1):c.292G>A (p.Gly98Ser) ORAI1 Mar 30, 2015 MedGen:C4014557,OMIM:615883 Myopathy, tubular aggregate, 2 germline 12 121627039 GCCTCCAGCCGGACCTCGGCTCTGCTCTCCGGCTTCGCCATGGTGAGCTCCGGCCGCCCTG 794726822 187753 NM_001165963.1(SCN1A):c.4044G>A (p.Met1348Ile) SCN1A Dec 20, 2014 MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002 Severe myoclonic epilepsy in infancy de novo 2 166002712 TGCCCTTTTAGGAGCAATTCCATCCATCATGAATGTGCTTCTGGTTTGTCTTATATTCTGG 879253810 214892 NM_000282.3(PCCA):c.863G>A (p.Arg288Lys) PCCA Aug 22, 2016 Human Phenotype Ontology:HP:0003353,MedGen:C0268579,OMIM:606054,Orphanet:ORPHA35 Propionic acidemia germline 13 100268732 AACATGGGAATGCTTTATGGCTTAATGAAAGAGAGTGCTCAATTCAGAGAAGAAATCAGAA 772434460 422075 NM_001171.5(ABCC6):c.1256G>A (p.Arg419Gln) ABCC6 Jun 03, 2016 MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005;MedGen:CN517202 Pseudoxanthoma elasticum;not provided germline 16 16198103 TGGTCAATCTGGTGTCCGTGGACGTGCAGCGGCTGACCGAGAGCGTCCTCTACCTCAACGG 104893960 21131 NM_004752.3(GCM2):c.187G>A (p.Gly63Ser) GCM2 May 01, 2005 MedGen:C1832648,OMIM:146200,Orphanet:ORPHA2238 Hypoparathyroidism familial isolated germline 6 10877296 GATGAGAAGAAGGCACAGCGTCACCTGAGCGGCTGGGCCATGCGCAACACCAACAACCACA 786200951 172075 NC_012920.1:m.5610G>A MT-TA Dec 15, 2014 Human Phenotype Ontology:HP:0003737,MedGen:C0162670,OMIM:251900,Orphanet:ORPHA206966 Mitochondrial myopathy maternal MT 5610 TAACAGCTAAGGACTGCAAAACCCCACTCTGCATCAACTGAACGCAAATCAGCCACTTTAA 281874689 35844 NM_000495.4(COL4A5):c.2288G>A (p.Gly763Glu) COL4A5 Aug 27, 2014 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive germline X 108606785 TTGCATTACCTGGGCCACCTGGGCCACCAGGACTTCCAGGTTTCAAAGGAGCACTTGGTCC 121917846 17961 NM_001033503.2(SAR1B):c.109G>A (p.Gly37Arg) SAR1B May 01, 2003 MedGen:C0795956,OMIM:246700,Orphanet:ORPHA71 Chylomicron retention disease germline 5 134621002 AAACTGGTATTTCTTGGATTGGATAATGCAGGAAAAACAACATTGCTACACATGCTAAAAG 375628463 237193 NM_001080.3(ALDH5A1):c.803G>A (p.Gly268Glu) ALDH5A1 May 23, 2017 MedGen:C0268631,OMIM:271980,Orphanet:ORPHA22,SNOMED CT:49748000;MedGen:CN517202 Succinate-semialdehyde dehydrogenase deficiency;not provided germline 6 24515243 CCTGTTCTCGAAAGAATGCCAAGGAAGTAGGGGAGGCAATTTGTACTGATCCTCTGGTGTC -1 439916 NM_022124.5(CDH23):c.6712+1G>A CDH23 Jul 01, 2017 MedGen:C1832394,OMIM:601386 Deafness, autosomal recessive 12 germline 10 71793641 AGGACGCCTTTGCTGTGAATATCAACACAGGTACAAGGGCCTGCACCCCTCCCACCTCCCT 104894226 27643 NM_005343.3(HRAS):c.38G>A (p.Gly13Asp) HRAS Jan 04, 2017 MeSH:D015179,MedGen:CN236642;MedGen:C0587248,OMIM:218040,Orphanet:ORPHA3071,SNOMED CT:309776008;MedGen:CN517202 Colorectal Neoplasms;Costello syndrome;not provided germline;somatic;unknown 11 534285 AATATAAGCTGGTGGTGGTGGGCGCCGGCGGTGTGGGCAAGAGTGCGCTGACCATCCAGCT 483352822 125844 NM_006912.5(RIT1):c.270G>A (p.Met90Ile) RIT1 Sep 22, 2016 MeSH:D009634,MedGen:C0028326,Orphanet:ORPHA648,SNOMED CT:205824006;MedGen:C3809233,OMIM:615355;MedGen:CN517202 Noonan syndrome;Noonan syndrome 8;not provided germline 1 155904470 AGAGTTTACAGCCATGCGGGACCAGTATATGAGGGCAGGAGAAGGGTTTATCATCTGTTAC 1057517694 359177 NM_032171.2(CEP78):c.893-1G>A CEP78 Jan 27, 2017 MedGen:C4310657,OMIM:617236 Cone-rod dystrophy and hearing loss germline 9 78248290 TACTATAATTTCAATTTTTATTTTACTTTAGATCATTCTATGATGAAAGCAGTTATCAAAA 387907306 45851 NM_003036.3(SKI):c.100G>A (p.Gly34Ser) SKI Feb 01, 2015 MedGen:C1321551,OMIM:182212,SNOMED CT:83092002;MedGen:CN517202 Shprintzen-Goldberg syndrome;not provided de novo;germline 1 2228866 TTCCACCTGAGCTCCATGAGCTCGCTGGGCGGCCCGGCCGCTTTCTCGGCGCGCTGGGCGC 121908375 20123 NM_015560.2(OPA1):c.869G>A (p.Arg290Gln) OPA1 Jan 06, 2016 MedGen:C0338508,OMIM:165500,Orphanet:ORPHA98672,SNOMED CT:2065009 Dominant hereditary optic atrophy germline 3 193637280 CCAGTTATAATACGCAAGATCATCTGCCACGGGTATGTGAAAAATTGATAGTGAACTTGCC 377767370 36201 NM_005359.5(SMAD4):c.1527G>A (p.Trp509Ter) SMAD4 Dec 04, 2012 MedGen:C0345893,OMIM:174900,Orphanet:ORPHA329971,SNOMED CT:9273005 Juvenile polyposis syndrome not provided 18 51078335 CATACTCAGGATGAGTTTTGTGAAAGGCTGGGGACCGGATTACCCAAGACAGAGCATCAAA 886041081 247444 NM_001151.3(SLC25A4):c.239G>A (p.Arg80His) SLC25A4 Oct 11, 2017 MedGen:C4310676,OMIM:617184;MedGen:C0751651,Orphanet:ORPHA68380;MedGen:CN517202 Mitochondrial DNA depletion syndrome 12a (cardiomyopathic type), autosomal dominant;Mitochondrial diseases;not provided de novo;germline 4 185144891 TCTGGAGGGGTAACCTGGCCAACGTGATCCGTTACTTCCCCACCCAAGCTCTCAACTTCGC 1057516988 357530 NM_000441.1(SLC26A4):c.416-1G>A SLC26A4 Nov 01, 2017 MedGen:C0271829,OMIM:274600,Orphanet:ORPHA705,SNOMED CT:70348004;MedGen:CN517202 Pendred's syndrome;not provided germline;unknown 7 107674163 TGATTAATTGTTAGAGACTTTTTTTCCCCAGGACCTTTTCCAGTGGTGAGTTTAATGGTGG 111033675 36496 NM_000155.3(GALT):c.368G>A (p.Arg123Gln) GALT Dec 04, 2012 MedGen:C0268151,OMIM:230400,Orphanet:ORPHA79239,SNOMED CT:124354006 Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase not provided 9 34647696 ATCATCCCCTTTTCCAAGCAAAGTCTGCTCGAGGAGTCTGGTAACTATGGATTTCCCCTCT 1064797081 411519 NM_000094.3(COL7A1):c.8278G>A (p.Gly2760Arg) COL7A1 - MedGen:C0079474,OMIM:226600,SNOMED CT:48528004 Recessive dystrophic epidermolysis bullosa maternal 3 48566686 GAGAGAGTGGTGGGGGCTCCTGGGGTCCCTGGAGCTCCTGGCGAGAGAGGGGAGCAGGTGA 121909229 22868 NM_000314.6(PTEN):c.389G>A (p.Arg130Gln) PTEN Nov 06, 2017 MedGen:C0007112;MedGen:C0278701;MeSH:D015179,MedGen:CN236642;MedGen:CN072330,OMIM:158350;Human Phenotype Ontology:HP:0100843,MeSH:D005909,MedGen:C0017636,SNOMED CT:63634009;MedGen:C0027672,SNOMED CT:699346009;MeSH:C562393,MedGen:C0151779,SNOMED CT:93655004;MedGen:C0153574,Orphanet:ORPHA213569;MeSH:D009369,MedGen:C0027651,SNOMED CT:108369006;Human Phenotype Ontology:HP:0100013,MeSH:D001943,MedGen:C1458155,Orphanet:ORPHA180250,SNOMED CT:126926005;MeSH:D010051,MedGen:CN236629;MedGen:C1959582,OMIM:601728,Orphanet:ORPHA306498;Human Phenotype Ontology:HP:0005584,MeSH:D002292,MedGen:C0007134,OMIM:605074,Orphanet:ORPHA217071,SNOMED CT:41607009;Gene:7864,Human Phenotype Ontology:HP:0030357,MeSH:D055752,MedGen:C0149925,OMIM:182280,Orphanet:ORPHA70573;Human Phenotype Ontology:HP:0030359,MedGen:C0149782;MeSH:C535575,MedGen:C1168401,OMIM:275355,Orphanet:ORPHA67037;MedGen:C0280630;MeSH:D002583,MedGen:CN236667;MedGen:CN517202 Adenocarcinoma of prostate;Adenocarcinoma of stomach;Colorectal Neoplasms;Cowden syndrome 1;Glioblastoma;Hereditary cancer-predisposing syndrome;Malignant melanoma of skin;Malignant neoplasm of body of uterus;Neoplasm;Neoplasm of the breast;Ovarian Neoplasms;PTEN hamartoma tumor syndrome;Renal cell carcinoma, papillary, 1;Small cell lung cancer;Squamous cell carcinoma of lung;Squamous cell carcinoma of the head and neck;Uterine Carcinosarcoma;Uterine cervical neoplasms;not provided germline;somatic 10 87933148 CAGCAATTCACTGTAAAGCTGGAAAGGGACGAACTGGTGTAATGATATGTGCATATTTATT 794726932 190513 NM_006517.4(SLC16A2):c.326G>A (p.Trp109Ter) SLC16A2 Dec 09, 2014 MedGen:C0795889,OMIM:300523,Orphanet:ORPHA59 Allan-Herndon-Dudley syndrome germline X 74421963 TCGGCTGGGTGGTGGTGTTCGCTGCCACCTGGTGCAACGGCTCCATCTTCGGCATCCATAA -1 479406 NM_005359.5(SMAD4):c.905G>A (p.Trp302Ter) SMAD4 May 26, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 18 51059866 AAAATGGAATTTTTGTTGTCTTTTCTTTAGGGCCTGTTCACAATGAGCTTGCATTCCAGCC -1 459906 NM_000141.4(FGFR2):c.1150G>A (p.Gly384Arg) FGFR2 Apr 07, 2017 MedGen:CN231480 FGFR2 related craniosynostosis germline 10 121515254 GACTACCTGGAGATAGCCATTTACTGCATAGGGGTCTTCTTAATCGCCTGTATGGTGGTAA 80356554 34257 NM_004385.4(VCAN):c.4004-1G>A VCAN Jan 07, 2016 MedGen:C0339540,OMIM:143200,SNOMED CT:232064001 Wagner syndrome germline 5 83537006 TTAAGTATTGTGAAAACTCTGTTTTTTTCAGGTCGAATGAGTGATTTGAGTGTAATTGGTC 104893723 20967 NM_006580.3(CLDN16):c.593G>A (p.Gly198Asp) CLDN16 Jul 02, 1999 MedGen:C0268448,OMIM:248250,Orphanet:ORPHA31043,SNOMED CT:80710001 Primary hypomagnesemia germline 3 190408314 ATTATTTGTAGCATCCTCCCTTTCTTTCAGGTACCCCAGGAATCATTGGCTCTGTGTGGTA 121917722 15250 NM_000285.3(PEPD):c.551G>A (p.Arg184Gln) PEPD Nov 01, 1996 MedGen:C0268532,OMIM:170100 Prolidase deficiency germline 19 33464060 TTGCTGCTTTGTTCTTCTGTCTCTGAAGCCGAGTGTTTAAGACGGATATGGAGCTGGAGGT 747995722 444896 NM_000372.4(TYR):c.655G>A (p.Glu219Lys) TYR Oct 31, 2017 MedGen:CN517202 not provided germline 11 89178608 CCTTGGCATAGACTCTTCTTGTTGCGGTGGGAACAAGAAATCCAGAAGCTGACAGGAGATG 758577372 224635 NM_000255.3(MUT):c.977G>A (p.Arg326Lys) MUT - MedGen:C1855114,OMIM:251000 Methylmalonic aciduria due to methylmalonyl-CoA mutase deficiency germline 6 49453691 ATATGGAAATAGCAAAGATGAGAGCTGGTAGAAGACTCTGGGCTCACTTAATAGAGAAAAT 67445413 413991 NM_000088.3(COL1A1):c.2596G>A (p.Gly866Ser) COL1A1 - MedGen:C0268362,OMIM:259420,Orphanet:ORPHA216812,SNOMED CT:385483009 Osteogenesis imperfecta type III unknown 17 50189876 GTTGGTGCTCCTGGAGCCAAAGGTGCTCGCGGCAGCGCTGGTCCCCCTGTGAGTATCACCC 121912896 32439 NM_001844.4(COL2A1):c.141G>A (p.Trp47Ter) COL2A1 Jul 01, 2006 MedGen:C1836080,OMIM:609508 Stickler syndrome, type I, nonsyndromic ocular germline 12 48000070 TGGGCAGAGGTATAATGATAAGGATGTGTGGAAGCCGGAGCCCTGCCGGATCTGTGTCTGT 386834024 71231 NM_017739.3(POMGNT1):c.1895+1G>A POMGNT1 Sep 20, 2016 MedGen:C0457133,OMIM:253280,Orphanet:ORPHA588,SNOMED CT:277950001;MedGen:C4310704,OMIM:617123 Muscle eye brain disease;Retinitis pigmentosa 76 germline 1 46189457 GATGGTGGGGGTCCCGGCTTCCCCCTACTCGTGAGTGACCCTTTTCTGCCCTGGGAAACAG 672601368 204420 NM_001244008.1(KIF1A):c.647G>A (p.Arg216His) KIF1A Aug 07, 2015 MedGen:C3280283,OMIM:614255;MedGen:C1850055,OMIM:260565,Orphanet:ORPHA2836 Mental retardation, autosomal dominant 9;PEHO syndrome de novo;germline 2 240785062 CGGCCACCAACATGAATGAGACCAGCAGTCGCTCCCACGCCGTCTTCAACATCATCTTCAC 80338857 34128 NM_001360.2(DHCR7):c.725G>A (p.Arg242His) DHCR7 Mar 10, 2017 MedGen:C0175694,OMIM:270400,Orphanet:ORPHA818,SNOMED CT:43929004 Smith-Lemli-Opitz syndrome germline;unknown 11 71438985 GGTTTGACTTCAAGCTGTTCTTCAATGGGCGCCCCGGGATCGTCGCCTGGACCCTCATCAA 11623 190219 NM_000153.3(GALC):c.169G>A (p.Gly57Ser) GALC Jun 06, 2017 MedGen:C0023521,OMIM:245200,Orphanet:ORPHA487,SNOMED CT:192782005;MedGen:CN517202 Galactosylceramide beta-galactosidase deficiency;not provided germline 14 87992996 GACTCCGACGGGCTGGGCCGGGAGTTCGACGGCATCGGCGCGGTCAGCGGCGGCGGGGTGA 786201049 182060 NM_000179.2(MSH6):c.1238G>A (p.Trp413Ter) MSH6 Dec 04, 2015 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 2 47799221 TCAATTCTTGTACTCCTGGGATGAGGAAGTGGTGGCAGATTAAGTCTCAGAACTTTGATCT 104886067 35648 NM_000495.4(COL4A5):c.646G>A (p.Gly216Arg) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108578078 AGATTTTTAAATGGAAACTTCTCTCTCCAGGGGAATATGGGCTTAAATTTCCAGGGACCCA 146013446 359127 NM_176869.2(PPA2):c.514G>A (p.Glu172Lys) PPA2 Nov 23, 2016 MedGen:C4310663,OMIM:617223;MedGen:C4310664,OMIM:617222 Sudden cardiac failure, alcohol-induced;Sudden cardiac failure, infantile not provided 4 105437964 TTTGGAGATAATGATCCTATTGATGTTTGCGAAATAGGCTCAAAGGTTTGTTTTATAGACT 267606622 17902 NM_173076.2(ABCA12):c.3535G>A (p.Gly1179Arg) ABCA12 Nov 01, 2006 MedGen:C0239849,OMIM:242500 Autosomal recessive congenital ichthyosis 4B germline 2 214990791 TTCAACAACACCAACATTGCAGCTCTGATCGGAAGCCTCATCTACATCATTGCCTTCTTTC 587777514 143246 NM_006439.4(MAB21L2):c.740G>A (p.Arg247Gln) MAB21L2 Jun 05, 2015 MedGen:C4014540,OMIM:615877,Orphanet:ORPHA424099 Microphthalmia/coloboma and skeletal dysplasia syndrome germline;inherited 4 150583769 CGGAGAACCGCCTGCTGATGGGCGGCTGCCGAAACAAGTGCCTCTCAGTGCTGAAGACTCT 771148614 443631 NM_000283.3(PDE6B):c.1280G>A (p.Trp427Ter) PDE6B Jun 29, 2017 MedGen:CN517202 not provided germline 4 657373 CCCTCCAGTCCCTGACACAGTTCCTGGGCTGGTCAGTGATGAACACCGACACCTACGACAA 397515935 51752 NM_000256.3(MYBPC3):c.1897+1G>A MYBPC3 Jul 27, 2017 Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Hypertrophic cardiomyopathy;Primary familial hypertrophic cardiomyopathy;not provided germline 11 47341137 GCAACCTGTCAGCCAAGCTCCACTTCATGGGTGAGCCTGCTCCAGGGTAGGGTGGGTCGGG 104886331 35761 NM_000495.4(COL4A5):c.1516+1G>A COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108595602 CTGGTTTGCCAGGTCTCCCAGGTCCTCCAGGTAAATTATGCCTCAGGGTAACCTTCTAAAT 113331868 424454 NM_171825.2(CAMK2A):c.1204+1G>A CAMK2A Jul 03, 2017 Human Phenotype Ontology:HP:0001249,MedGen:C1843367 Intellectual disability de novo 5 150228191 TGGACTTCCATCGATTCTATTTTGAAAACCGTGAGCAATTCCTTCTCTCTGTGGTGCCTGT -1 440367 NM_000702.3(ATP1A2):c.2563G>A (p.Gly855Arg) ATP1A2 Feb 07, 2017 MedGen:CN517202 not provided germline 1 160136370 AGGCTCATCAGCATGGCCTACGGACAGATCGGTGCGCCAAGCCCCGGGCCTCGGGAGGGAA 121912717 32951 NM_000039.2(APOA1):c.664G>A (p.Glu222Lys) APOA1 Aug 01, 1988 na APOLIPOPROTEIN A-I (MUNSTER4) germline 11 116835948 AGACTGGCCGAGTACCACGCCAAGGCCACCGAGCATCTGAGCACGCTCAGCGAGAAGGCCA 113994124 15735 NM_001145320.1(ADAMTSL2):c.2431G>A (p.Gly811Arg) ADAMTSL2 Apr 19, 2012 MedGen:C3278147,OMIM:231050,SNOMED CT:28557005 Geleophysic dysplasia 1 germline 9 133570346 CTGCCCCGGCCTCAGTGCAACACCACCTGCGGGCGCGGGGTCAAGAAGCGGCTGGTGCTCT 387906790 39109 NM_007126.4(VCP):c.1774G>A (p.Asp592Asn) VCP Dec 09, 2010 MedGen:C3152097 Amyotrophic lateral sclerosis 14 without frontotemporal dementia germline 9 35059723 ATTGCCAAGGCTCGTGGAGGTAACATTGGAGATGGTGGTGGGGCTGCTGACCGAGTCATCA 61750420 22555 NM_000466.2(PEX1):c.2528G>A (p.Gly843Asp) PEX1 Jul 13, 2017 MeSH:D057130,MedGen:C0339527,Orphanet:ORPHA65,SNOMED CT:193413001;MedGen:CN168921,OMIM:601539;MedGen:C1832200,Orphanet:ORPHA79189;MedGen:C0043459,OMIM:214100,Orphanet:ORPHA912,SNOMED CT:88469006;MedGen:CN517202 Leber congenital amaurosis;Peroxisome biogenesis disorder 1B;Peroxisome biogenesis disorders, Zellweger syndrome spectrum;Zellweger syndrome;not provided germline;paternal;unknown 7 92501562 AACCTAGAGACCTGGGTTGGGACAAGATTGGTGGGTTACATGAAGTTAGGCAGATACTCAT 104886168 35824 NM_000495.4(COL4A5):c.2060G>A (p.Gly687Glu) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108601903 GTTTCTCCATAGGTGACCCTGGACTTCCAGGGCAACCAGGCTTGCCAGGGATACCTGGTAG 863224492 213294 NM_000267.3(NF1):c.6999+1G>A NF1 Jul 28, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003 Hereditary cancer-predisposing syndrome;Neurofibromatosis, type 1 germline 17 31340646 TTAGATAGTCTCCGTATATTCAATGACAAGGTAAGCAAACTTTGCCTTGAGGTTCCTAGAT -1 485773 NM_000267.3(NF1):c.4269+1G>A NF1 Aug 08, 2017 MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003 Neurofibromatosis, type 1 germline 17 31258503 ATCGAAAGGGGCTTGAAGTTAATGTCAAAGGTGAATTATTTTGATAATCTAGCTATCTTAA 373919408 362089 NM_014855.2(AP5Z1):c.1322G>A (p.Trp441Ter) AP5Z1 Mar 28, 2017 MedGen:C3150901,OMIM:613647,Orphanet:ORPHA306511 Spastic paraplegia 48, autosomal recessive germline 7 4787644 CCGCTGTGCTGTGCCCACAGTTCCTGGCCTGGAACAGCCCACCCCTCACCTCCGAGTTTGT 794726659 17662 NM_022464.4(SIL1):c.645+1G>A SIL1 Dec 01, 2005 MedGen:C0024814,OMIM:248800,Orphanet:ORPHA559,SNOMED CT:80734006 Marinesco-Sjögren syndrome germline 5 139026800 CTCTTTGATCTTGAATATTATGTCCATCAGGTACTGTATTTCTTCGTCCATAAGTCAGACT 121964905 15259 NM_000027.3(AGA):c.904G>A (p.Gly302Arg) AGA Dec 15, 1991 Human Phenotype Ontology:HP:0012068,MedGen:C0268225,OMIM:208400 Aspartylglucosaminuria germline 4 177433250 AGAATCCAGAAGCATTTTCCAGAATTCTTTGGGGCTGTTATATGTGCCAATGTGACTGGAA 759924541 393792 NM_198056.2(SCN5A):c.3285G>A (p.Trp1095Ter) SCN5A Apr 05, 2016 MedGen:C1142166,Orphanet:ORPHA130,SNOMED CT:418818005 Brugada syndrome germline 3 38579439 CCCAGAGGCCCCTCCGGATTCCAGGACCTGGAGCCAGGTGTCAGCGACTGCCTCCTCTGAG 1085307325 414274 NM_001204.6(BMPR2):c.1259G>A (p.Cys420Tyr) BMPR2 - MedGen:C0152171,OMIM:178600,SNOMED CT:26174007 Primary pulmonary hypertension germline 2 202532715 GACTAATCTATTGGGAGATATTTATGAGATGTACAGACCTCTTCCCAGGTAAAAACTACTG 587783368 167932 NM_003688.3(CASK):c.708+1G>A CASK Feb 08, 2013 MedGen:C2677903,OMIM:300749,Orphanet:ORPHA163937 Mental retardation and microcephaly with pontine and cerebellar hypoplasia germline X 41665276 TTTGAAGGCATTATTAAAGGAAAATATAAGGTAATGCATCATGAACATTTTCTTTTTCCAT 756987454 476084 NM_000051.3(ATM):c.4909+1G>A ATM Apr 03, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 11 108295060 AGATGGTGGACATTATGAGAGCTTCTCAGGGTGCTAATTTTAAATGACATGGGCTATTTCT 121964881 27268 NM_001692.3(ATP6V1B1):c.232G>A (p.Gly78Arg) ATP6V1B1 Feb 01, 2003 MedGen:C4016429 Renal tubular acidosis, distal, with progressive deafness germline 2 70958103 TTCACCCTCCCAGATGGGACTCAGAGGAGCGGGCAGGTGCTTGAGGTGGCTGGCACCAAGG -1 431537 NM_014233.3(UBTF):c.628G>A (p.Glu210Lys) UBTF Dec 11, 2017 MedGen:CN469330,OMIM:617672;na NEURODEGENERATION, CHILDHOOD-ONSET, WITH BRAIN ATROPHY;UBTF E210K Neuroregression Syndrome de novo;germline;not applicable 17 44212851 AAAACCCCCCAGCAGCTGTGGTACACCCACGAGAAGAAGGTGTATCTCAAAGTGCGGCCAG 550423482 224877 NM_018129.3(PNPO):c.674G>A (p.Arg225His) PNPO Jun 03, 2017 Human Phenotype Ontology:HP:0001510,MedGen:C3552463;Human Phenotype Ontology:HP:0001511,MedGen:C1386048;MedGen:C1864723,OMIM:610090,Orphanet:ORPHA79096;Human Phenotype Ontology:HP:0001250,MedGen:C0036572 Growth delay;Intrauterine growth retardation;Pyridoxal 5'-phosphate-dependent epilepsy;Seizures germline;unknown 17 47946670 TGATGGAGTTCTGGCAAGGTCAAACCAACCGCCTGCATGACCGGATAGTCTTTCGGCGGGG 74315419 18492 NM_144773.3(PROKR2):c.969G>A (p.Met323Ile) PROKR2 Oct 20, 2006 MedGen:C2930927,OMIM:244200 Kallmann syndrome 3 germline 20 5302226 TGCCTTCTACGTGGTCGAGTGCATCGCCATGAGCAACAGCATGATCAACACCGTGTGCTTC 66724222 103231 NM_000531.5(OTC):c.830G>A (p.Arg277Gln) OTC Oct 18, 2016 MedGen:CN517202;MedGen:CN169374 not provided;not specified germline;unknown X 38408988 GCATGGGACAAGAAGAGGAGAAGAAAAAGCGGCTCCAGGCTTTCCAAGGTTACCAGGTTAC 104894928 24927 NM_000330.3(RS1):c.214G>A (p.Glu72Lys) RS1 Feb 19, 2016 MedGen:C0271091,OMIM:312700,Orphanet:ORPHA792,SNOMED CT:86923008;MedGen:CN517202 Juvenile retinoschisis;not provided germline;unknown X 18647303 GAATGCCCATATCACAAGCCTCTGGGTTTCGAGTCAGGGGAGGTCACACCGGACCAGATCA 1060502902 472936 NM_000179.2(MSH6):c.315G>A (p.Trp105Ter) MSH6 Nov 21, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 2 47790981 GGTTTGGGCCAAGATGGAGGGTTACCCCTGGTGGCCTTGTCTGGTTTACAACCACCCCTTT -1 445599 NM_004360.4(CDH1):c.48+1G>A CDH1 Jul 20, 2017 MedGen:CN517202 not provided germline 16 68737464 AGCCTCTCGGCGCTGCTGCTGCTGCTGCAGGTACCCCGGATCCCCTGACTTGCGAGGGACG 886044747 237655 NM_000350.2(ABCA4):c.5189G>A (p.Trp1730Ter) ABCA4 Jan 01, 2016 MeSH:C535804,MedGen:C1855465,OMIM:248200 Stargardt disease 1 germline;unknown 1 94019589 CCACCACCTACTGGGTGACCAACTTCCTCTGGGACATCGTAAGTGTCAGTTTACAGCGCCT -1 457178 NM_001277115.1(DNAH11):c.1593+1G>A DNAH11 Feb 06, 2017 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244 Ciliary dyskinesia germline 7 21571974 ACTTATGACCCATCTGATTGCACTAACATGGTAATGTTGTACCTTTGCATTTTCATTGCAT 137853082 264827 NM_000455.4(STK11):c.717G>A (p.Trp239Ter) STK11 Jul 24, 2016 MedGen:CN517202 not provided germline 19 1220700 CACCTTCTCCGGCTTCAAGGTGGACATCTGGTCGGCTGGGGTCACCCTGTAAGTGCCCCGC 879255510 20120 NM_015560.2(OPA1):c.985-1G>A OPA1 Oct 05, 2016 MedGen:C0338508,OMIM:165500,Orphanet:ORPHA98672,SNOMED CT:2065009;MedGen:CN517202 Dominant hereditary optic atrophy;not provided germline 3 193642764 TCATTACCTCTCAGTTTTCTGTTACTATCAGGTGACTCTGAGTGAAGGTCCTCACCATGTG 1801267 15476 NM_000110.3(DPYD):c.2657G>A (p.Arg886His) DPYD Dec 01, 1997 MedGen:C2720286,OMIM:274270 Dihydropyrimidine dehydrogenase deficiency germline 1 97098598 TGCCAAGTTTTGGACCTTATCTGGAACAGCGCAAGAAAATCATAGCAGAAAACAAGATTAG 876660037 232760 NM_000179.2(MSH6):c.2331G>A (p.Trp777Ter) MSH6 Aug 09, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 2 47800314 TCCTTTTGGTAAGCGGCTCCTAAAGCAATGGCTTTGTGCCCCACTCTGTAACCATTATGCT 1064039 20674 NM_000099.3(CST3):c.73G>A (p.Ala25Thr) CST3 Feb 01, 2002 MedGen:C2677774,OMIM:611953 Age-related macular degeneration 11 germline 20 23637790 CTGGCCGTGGCCCTGGCCGTGAGCCCCGCGGCCGGCTCCAGTCCCGGCAAGCCGCCGCGCC 587779660 107150 NM_000090.3(COL3A1):c.690+1G>A (p.Gly213_Asp230del) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188989450 ATAGGTCCATCTGGTCCTGCTGGAAAAGATGTAAGTTTTTAAAACTTAAATAAGAATACAG 201930377 445333 NM_000338.2(SLC12A1):c.2873+1G>A SLC12A1 Jul 26, 2017 MedGen:CN517202 not provided germline 15 48288517 GATCAACCGCATTGAAGAAGAAAAAATTGTGTAAGTAGTTTGCCACTCACATGTTAGGTCA 587779711 107225 NM_000090.3(COL3A1):c.610G>A (p.Gly204Ser) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188988617 TAGGGATCTCCAGGATACCAAGGACCCCCTGGTGAACCTGGGCAAGCTGGTCCTTCAGTAA 752300607 214297 NM_019892.5(INPP5E):c.1754G>A (p.Arg585His) INPP5E Feb 23, 2015 Human Phenotype Ontology:HP:0002335,MedGen:C0431399,Orphanet:ORPHA475,SNOMED CT:253175003,SNOMED CT:716997004 Joubert syndrome unknown 9 136430325 CCTGCCCCGGGATCAAGACGTCCGACCACCGCCCTGTGTATGGCCTCTTCCGGGTGAAAGT 587779570 107027 NM_000090.3(COL3A1):c.737G>A (p.Gly246Glu) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188990142 CCGGACGACCTGGAGAGCGAGGATTGCCTGGACCTCCAGTGAGTCTTCAGCATCTAATAAA 75184679 16301 NM_024570.3(RNASEH2B):c.529G>A (p.Ala177Thr) RNASEH2B Sep 25, 2017 MedGen:C0393591,Orphanet:ORPHA51,SNOMED CT:230312006;MedGen:C3489724,OMIM:610181;MedGen:CN517202 Aicardi Goutieres syndrome;Aicardi Goutieres syndrome 2;not provided germline 13 50945445 GTTGCTTCATAGGTTAATCAAACTGTGGCAGCATTAAAAACCAATAATGTGAATGTCAGTT 75822236 19350 NM_000157.3(GBA):c.1604G>A (p.Arg535His) GBA Feb 09, 2016 MedGen:C0017205,Orphanet:ORPHA355;MedGen:C1961835,OMIM:230800,SNOMED CT:62201009 Gaucher disease;Gaucher's disease, type 1 germline;unknown 1 155235002 GCTACTCCATTCACACCTACCTGTGGCGTCGCCAGTGATGGAGCAGATACTCAAGGAGGCA 864309672 23304 NM_201378.3(PLEC):c.1221G>A (p.Ser407=) PLEC Feb 01, 2005 MedGen:C2677349,OMIM:612138,Orphanet:ORPHA158684 Epidermolysis bullosa simplex with pyloric atresia germline 8 143933998 GCTGAACCAGGCCGACGCCCTGCTGCAGTCGGTGAGGGGGTGTGGGGCAGGCAGTGGGCGG 753319170 434238 NM_000527.4(LDLR):c.644G>A (p.Arg215His) LDLR - MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11105550 TAAGTGGCGAGTGCATCCACTCCAGCTGGCGCTGTGATGGTGGCCCCGACTGCAAGGACAA -1 474950 NM_002485.4(NBN):c.1124G>A (p.Trp375Ter) NBN Jan 25, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 8 89958725 CTGACACAGAATCAGAGCAAGCAGATACATGGTAAAGCTTCTTCATTACCGTACTATTGTT 104886083 35684 NM_000495.4(COL4A5):c.928G>A (p.Gly310Arg) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108581019 CCAGGCAAAGATGGAGAAAATGGCCAACCAGGAATTCCTGTAAGTAGCTAAGGTTCTTTCC 587776816 29621 NM_000421.3(KRT10):c.1373+1G>A KRT10 Oct 01, 2010 MedGen:C1836681,OMIM:609165 Erythroderma, ichthyosiform, congenital reticular germline 17 40819516 CTACCGCAGCCTGCTAGAAGGAGAGGGAAGGTAAATTTTAAAATGAAAAGTTATCCCAGTT 121912771 32689 NM_000494.3(COL17A1):c.3908G>A (p.Arg1303Gln) COL17A1 Jun 01, 1997 MedGen:C2608084 Epidermolysis bullosa, junctional, localisata variant germline 10 104034193 GCTCCTCCTCACACAGCTCATCTGTCAGGCGGGGCAGCTCCTACAGCTCTTCCATGAGCAC 267606752 24472 NM_004380.2(CREBBP):c.3832G>A (p.Glu1278Lys) CREBBP Mar 15, 2016 MedGen:C0035934,OMIM:180849,Orphanet:ORPHA353277,SNOMED CT:45582004;MedGen:CN517202 Rubinstein-Taybi syndrome;not provided germline 16 3749631 GAAAAGAAGAAAAATGATACCTTAGACCCCGAACCGTAAGTATATAGCTATTTCTTTTTTA 121913608 29237 NM_000530.7(MPZ):c.367G>A (p.Gly123Ser) MPZ Jan 22, 2008 MedGen:C0270912,OMIM:118200,Orphanet:ORPHA101082,SNOMED CT:42986003 Charcot-Marie-Tooth disease, demyelinating, type 1b germline 1 161306789 GTCATACACAACCTAGACTACAGTGACAATGGCACGTTCACTTGTGACGTCAAAAACCCTC 67682641 32363 NM_000088.3(COL1A1):c.1588G>A (p.Gly530Ser) COL1A1 Oct 10, 2016 MedGen:C0023931,OMIM:166200,SNOMED CT:385482004;MedGen:C0268362,OMIM:259420,Orphanet:ORPHA216812,SNOMED CT:385483009 Osteogenesis imperfecta type I;Osteogenesis imperfecta type III germline 17 50194375 AAAGGATCTCCTGGTGAAGCTGGTCGTCCCGGTGAAGCTGGTCTGCCTGGTGCCAAGGTGA -1 24960 NM_000328.2(RPGR):c.1059+363G>A RPGR Aug 01, 2007 MedGen:C1848295,OMIM:300029 Retinitis pigmentosa 15 germline X 38300884 TTTAATAAATATTTGCTGAATTAAATGTTAGACTCTCAAATCCTGCACAACAGAAAGTCTG 121912543 29899 NM_182894.2(VSX2):c.599G>A (p.Arg200Gln) VSX2 Jan 01, 2001 MedGen:C1864722 Microphthalmia, cataracts, and iris abnormalities germline 14 74259621 TGCACCTGCAGGTCTGGTTCCAGAACCGTCGAGCCAAGTGGAGGAAGCGGGAGAAGTGCTG 587783343 167860 NM_139343.2(BIN1):c.1713G>A (p.Trp571Ter) BIN1 Feb 08, 2013 MedGen:C0410204,OMIM:255200,Orphanet:ORPHA169186,SNOMED CT:240081004 Autosomal recessive centronuclear myopathy germline 2 127048595 CTGGCTCATGGGCGTGAAGGAGAGCGACTGGAACCAGCACAAGGAGCTGGAGAAGTGCCGT -1 429955 NM_000430.3(PAFAH1B1):c.568+1G>A PAFAH1B1 Aug 07, 2015 MedGen:C1843916,OMIM:607432 Lissencephaly 1 germline 17 2670332 AGGGCTTTGAATGCATCAGAACCATGCACGGTAAGGGGTAGAGGATAGTGCTTTAACAGTA 199422279 47895 NR_001566.1(TERC):n.305G>A TERC May 10, 2012 Human Phenotype Ontology:HP:0001915,MedGen:C0002874,OMIM:609135,SNOMED CT:306058006 Aplastic anemia not provided 3 169764756 CTCCGGAGGCACCCACTGCCACCGCGAAGAGTTGGGCTCTGTCAGCCGCGGGTCTCTCGGG 193922672 45341 NM_004572.3(PKP2):c.1613G>A (p.Trp538Ter) PKP2 Jul 17, 2017 MedGen:C0349788,Orphanet:ORPHA247,SNOMED CT:253528005,SNOMED CT:281170005;MedGen:C1836906,OMIM:609040;MedGen:CN517202 Arrhythmogenic right ventricular cardiomyopathy;Arrhythmogenic right ventricular cardiomyopathy, type 9;not provided germline 12 32841103 CGGAGAATATCATCATCCCCTTTTCTGGGTGGCCTGAAGGAGACTACCCAAAAGCAAATGG 587778795 76776 NM_000784.3(CYP27A1):c.433G>A (p.Gly145Arg) CYP27A1 Aug 01, 2013 MedGen:C0238052,OMIM:213700,Orphanet:ORPHA909,SNOMED CT:63246000 Cholestanol storage disease not provided 2 218809754 GAGCACCGGGACCAGCACGACCTGACCTATGGGCCGTTCACCACGTGAGCTGGGGCCTGAA 3134560 24647 m.12192G>A MT-TH Jan 01, 2003 MedGen:C3532240;MedGen:C4016610 Cardiomyopathy, hypertrophic, mitochondrial;Cardiomyopathy, idiopathic dilated, mitochondrial germline MT 12192 CAGATTGTGAATCTGACAACAGAGGCTTACGACCCCTTATTTACCGAGAAAGCTCACAAGA 863225208 214365 NM_017777.3(MKS1):c.950G>A (p.Gly317Glu) MKS1 Feb 23, 2015 Human Phenotype Ontology:HP:0002335,MedGen:C0431399,Orphanet:ORPHA475,SNOMED CT:253175003,SNOMED CT:716997004 Joubert syndrome unknown 17 58210988 TCCCAGGTGCCCTCCGGCTCTTTGTAAATGGAGAGGTCGGTAAGTGTCTTGCTAGCATAGA 1057518230 360250 NM_000548.4(TSC2):c.4493+1G>A TSC2 Nov 12, 2016 MedGen:CN517202 not provided germline 16 2084716 TGCAGAGAAAGTGCCAGGCATCAACCCCAGGTGGGCCTCTTGCTTCCGGGCGGGGCTCCTG 200782888 169242 NM_004380.2(CREBBP):c.3836+1G>A CREBBP Feb 08, 2013 MedGen:C0035934,OMIM:180849,Orphanet:ORPHA353277,SNOMED CT:45582004 Rubinstein-Taybi syndrome germline 16 3749626 GAAGAAAAATGATACCTTAGACCCCGAACCGTAAGTATATAGCTATTTCTTTTTTACTTTC 398124167 101004 NM_001271208.1(NEB):c.1152+1G>A NEB Nov 14, 2013 MedGen:C1850569,OMIM:256030 Nemaline myopathy 2 germline 2 151706880 CTGAAGGCAGCAGGAGATGCCCTAAGTGACGTAAGTATATTTTTGTCAAAGTGTTTTTAAA 137854470 31467 NM_000138.4(FBN1):c.3350G>A (p.Cys1117Tyr) FBN1 Nov 01, 1993 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006 Marfan syndrome germline 15 48487425 GTCATTTCCATTTTGCAGATATTGATGAGTGTCAGAGAGATCCTCTCCTATGCCGAGGTGG 112907302 422019 NM_000138.4(FBN1):c.7819+1G>A FBN1 Sep 27, 2015 MedGen:CN517202 not provided germline 15 48420686 TCCAGCACTACCAGTGGAACCAGTGTGTTGGCAAGTAACTTTTCCTCACTCTCAAGATGCA 1131691175 421062 NM_004329.2(BMPR1A):c.1460G>A (p.Trp487Ter) BMPR1A Jan 13, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 10 86923493 AACGTTTGCGGCCAATTGTGTCTAATCGGTGGAACAGTGATGAAGTGAGTGGAACTCAGTC 137852871 17416 NM_000709.3(BCKDHA):c.868G>A (p.Gly290Arg) BCKDHA Aug 25, 2013 MedGen:CN068546;MedGen:C0024776,OMIM:248600,SNOMED CT:27718001 MAPLE SYRUP URINE DISEASE, INTERMEDIATE, TYPE IA;Maple syrup urine disease germline 19 41422643 CTCTGTGTCCCCACAGCAGCACGAGGCCCCGGGTATGGCATCATGTCAATCCGCGTGGATG 752611378 418321 NM_002035.2(KDSR):c.879G>A (p.Gln293=) KDSR Jun 13, 2017 MedGen:CN258422,OMIM:617526 Erythrokeratodermia variabilis et progressiva 4 germline 18 63335257 AGTAACTTCTATTACTGAGGGGCTCCAGCAGGTAAGCTCTGCCTAGGCTAGCAATCAGACA 119103269 17306 NM_000101.3(CYBA):c.373G>A (p.Ala125Thr) CYBA Jun 01, 2008 MedGen:C1856255,OMIM:233690 Granulomatous disease, chronic, autosomal recessive, cytochrome b-negative germline 16 88643568 GCGGCTCAACCCTTCAGTGCCCCGCAGGCGGCTGTGCGTGGCGAGCAGTGGACGCCCATCG 780600124 440196 NM_001080463.1(DYNC2H1):c.9865G>A (p.Asp3289Asn) DYNC2H1 Jun 01, 2017 MedGen:CN674505 Short-rib polydactyly syndrome type III unknown 11 103243717 TACTAGAGTCGAGTGTGCCCATTTCTTATAGATCCTTCTTCCCAAGCTACAGAGTGGTTAA 113993969 22528 NM_002775.4(HTRA1):c.889G>A (p.Val297Met) HTRA1 Sep 11, 2014 MedGen:C1838577,OMIM:600142,Orphanet:ORPHA199354 Cerebral autosomal recessive arteriopathy with subcortical infarcts and leukoencephalopathy germline 10 122506802 TCCCTTCAAAACACAGTCACCACCGGGATCGTGAGCACCACCCAGCGAGGCGGCAAAGAGC 111033178 52388 NM_000260.3(MYO7A):c.3719G>A (p.Arg1240Gln) MYO7A Feb 28, 2017 MeSH:D052245,MedGen:C0271097,Orphanet:ORPHA886;MedGen:C1568247,OMIM:276900,Orphanet:ORPHA231169;MedGen:CN517202 Usher syndrome;Usher syndrome, type 1;not provided germline;unknown 11 77190108 GCCTGAGAAGGACCTTTGTCAATGGGACACGGACACAGCCGCCCAGCTGGCTGGAGCTGCA 587776454 360619 NM_002049.3(GATA1):c.622G>A (p.Gly208Arg) GATA1 Nov 14, 2016 MedGen:CN517202 not provided germline X 48792346 CCACCAGAGGCCAGGGAGTGTGTGAACTGCGGAGCAACAGCCACTCCACTGTGGCGGAGGG 199476317 40544 NM_001018005.1(TPM1):c.688G>A (p.Asp230Asn) TPM1 Nov 10, 2017 MedGen:C2678476,OMIM:611878;EFO:EFO_0000407,Human Phenotype Ontology:HP:0001644,MedGen:C0007193,Orphanet:ORPHA217604,SNOMED CT:195021004;MedGen:CN517202 Dilated cardiomyopathy 1Y;Primary dilated cardiomyopathy;not provided germline 15 63062263 AGATATGAGGAAGAGATCAAGGTCCTTTCCGACAAGCTGAAGGAGGTAATATGAGAGTTGT 137853159 23793 NM_000338.2(SLC12A1):c.1875G>A (p.Trp625Ter) SLC12A1 Nov 01, 1997 MedGen:C1866495,OMIM:601678 Bartter syndrome, type 1, antenatal germline 15 48251703 GTGCTGTGCAGTCATGTTTGTCATCAACTGGTGGGCAGCTGTCATCACCTATGTCATTGAA 1800582 32753 NM_002099.7(GYPA):c.232G>A (p.Gly78Arg) GYPA Dec 05, 1993 na BLOOD GROUP ERIK germline 4 144119686 AGAACTGTTTACCCTCCAGAAGAGGAAACCGGTATGTTCTTAGTTTTAAATAGTTGCTCTG 120074194 18184 NM_000218.2(KCNQ1):c.806G>A (p.Gly269Asp) KCNQ1 Jun 09, 2017 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MeSH:D008133,MedGen:C0023976,SNOMED CT:9651007;MedGen:C0035828,OMIM:192500,Orphanet:ORPHA101016,SNOMED CT:20852007;MedGen:CN517202 Congenital long QT syndrome;Long QT syndrome;Long QT syndrome 1;not provided germline 11 2572871 CCTAGGAGCTGATAACCACCCTGTACATCGGCTTCCTGGGCCTCATCTTCTCCTCGTACTT -1 39410 NM_015331.2(NCSTN):c.1551+1G>A NCSTN Nov 19, 2010 MedGen:CN028850,OMIM:142690 Familial acne inversa 1 germline 1 160355959 AGCGACACAGTTCAGGCTGATCCCCAAACGGTAAGCAGATGGGCCCTAGCTCCTTCTTTCT 756085990 481431 NM_001002755.2(NFU1):c.545+5G>A NFU1 Dec 07, 2017 Gene:80767,MedGen:C3276432,OMIM:605711 Multiple mitochondrial dysfunctions syndrome 1 germline 2 69406017 AAGGAATTGTTAGATACTAGAATACGGTACGTGCTCCTCTCTCTACCTGAATTCAAGTGCT 875989895 228128 NM_000527.4(LDLR):c.311G>A (p.Cys104Tyr) LDLR Dec 16, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline;unknown 19 11102784 ACTGCGACAACGGCTCAGACGAGCAAGGCTGTCGTAAGTGTGGCCCTGCCTTTGCTATTGA 794727774 195207 NM_000147.4(FUCA1):c.1125G>A (p.Trp375Ter) FUCA1 Dec 12, 2014 MedGen:C0016788,OMIM:230000,Orphanet:ORPHA349,SNOMED CT:64716005 Fucosidosis germline 1 23848684 TGGGGAGGCTATCTATGCCTCCAAACCATGGCGGGTGCAATGGGAAAAGAACACAACATCT 80358650 66247 NM_000059.3(BRCA2):c.3G>A (p.Met1Ile) BRCA2 Jan 20, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome germline 13 32316463 AAGCATTGGAGGAATATCGTAGGTAAAAATGCCTATTGGATCCAAAGAGAGGCCAACATTT 886039470 260216 NM_006087.3(TUBB4A):c.785G>A (p.Arg262His) TUBB4A Nov 07, 2017 MedGen:C2676244,OMIM:612438,Orphanet:ORPHA139441;MedGen:CN517202 Leukodystrophy, hypomyelinating, 6;not provided germline 19 6495714 AGCTGGCCGTCAACATGGTTCCCTTTCCTCGCCTGCACTTCTTCATGCCCGGCTTCGCACC 606231230 39453 NM_022458.3(LMBR1):c.423+4810G>A LMBR1 Apr 01, 2011 MedGen:C1868114,OMIM:174500,Orphanet:ORPHA93336 Polydactyly, preaxial II germline 7 156791579 TATAAAGCTGAGCAACATGACAGCACAATAGAGGAGGAACAAAGATTTTTTTAATATGTTT 587776827 30707 NM_000517.4(HBA2):c.301-1G>A HBA2 Mar 28, 2013 na;MedGen:CN077787 HEMOGLOBIN CLINICO-MADRID;Hemoglobin H disease, nondeletional germline 16 173471 CTGGGCCGCACTGACCCTCTTCTCTGCACAGCTCCTAAGCCACTGCCTGCTGGTGACCCTG 61754380 207920 NM_000372.4(TYR):c.982G>A (p.Glu328Lys) TYR Mar 16, 2015 MedGen:C0268494,OMIM:203100,Orphanet:ORPHA79431,SNOMED CT:6483008 Tyrosinase-negative oculocutaneous albinism germline 11 89191364 GTAGAATTTTGCCTGAGTTTGACCCAATATGAATCTGGTTCCATGGATAAAGCTGCCAATT 797044928 205282 NM_001376.4(DYNC1H1):c.10033G>A (p.Glu3345Lys) DYNC1H1 Jul 20, 2013 MeSH:D030342,MedGen:C0950123 Inborn genetic diseases germline 14 102032421 TGGAAGCAGATCCGCTCCATCATCATGCGGGAGAACTTCATCCCCACCATCGTCAACTTCT 207459998 24718 m.14846G>A MT-CYB Sep 30, 1999 MedGen:C0241885 Exercise intolerance germline MT 14846 CCATCCAACATCTCCGCATGATGAAACTTCGGCTCACTCCTTGGCGCCTGCCTGATCCTCC 587779638 107116 NM_000090.3(COL3A1):c.2176G>A (p.Gly726Arg) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188999524 CCTGGTGCTGCTGGTACTCCTGGTCTGCAAGGAATGCCTGGAGAAAGAGGAGGTCTTGGAA 137853582 28678 NM_000175.4(GPI):c.475G>A (p.Gly159Ser) GPI Mar 01, 1993 MedGen:C3150730,OMIM:613470,Orphanet:ORPHA712 Hemolytic anemia, nonspherocytic, due to glucose phosphate isomerase deficiency germline 19 34377575 ATCACGGACGTCATCAACATTGGCATTGGCGGCTCCGACCTGGTGAGGAGAAAACTGCCTT 121964965 15160 NM_000071.2(CBS):c.415G>A (p.Gly139Arg) CBS Jul 01, 1995 MedGen:CN068394 Homocystinuria, pyridoxine-responsive germline 21 43066279 GATGCTGAGCGCGACGGGACGCTGAAGCCCGGGGACACGATTATCGAGCCGACATCCGGGA -1 481221 NM_017780.3(CHD7):c.5355G>A (p.Trp1785Ter) CHD7 Oct 27, 2017 MedGen:C0265354,OMIM:214800,Orphanet:ORPHA138,SNOMED CT:47535005 CHARGE association de novo 8 60849105 ACCTTTCCATGCTGAAGTTCCTGCAGATTGGTGGGATAAGGAAGCAGACAAATCCCTCTTA 774456344 210957 NM_024996.5(GFM1):c.688G>A (p.Gly230Ser) GFM1 Jun 25, 2013 MedGen:CN517202 not provided germline 3 158649156 GAACGAGCCATCTATTTTGATGGAGACTTTGGGTAAGTGCTAAAAATACATTATTAAAATT 879254569 245628 NM_000527.4(LDLR):c.539G>A (p.Trp180Ter) LDLR Mar 30, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11105445 ACCCCGACTGCGAAGATGGCTCGGATGAGTGGCCGCAGCGCTGTAGGGGTCTTTACGTGTT -1 354272 NM_013386.4(SLC25A24):c.650G>A (p.Arg217His) SLC25A24 Jan 26, 2018 MedGen:C2676780,OMIM:612289,SNOMED CT:205800003 Fontaine progeroid syndrome de novo;germline 1 108157481 TCTCTCGAACAAGCACTGCCCCTTTGGACCGTCTGAAAATCATGATGCAGGTGAGCTTTAT 794727188 191907 NM_004369.3(COL6A3):c.6239G>A (p.Gly2080Asp) COL6A3 Jun 28, 2016 MedGen:CN029274,OMIM:158810;MedGen:CN033863,OMIM:254090 Bethlem myopathy 1;Ullrich congenital muscular dystrophy 1 germline 2 237360131 AGGGTGAGCGTGGTCCGCCTGGTGTGAACGGCACTCAAGGTTTCCAGGGCTGCCCGGGCCA 281864914 46892 NM_001146040.1(GLRA1):c.299G>A (p.Arg100His) GLRA1 Oct 04, 2012 MedGen:C1835614,OMIM:149400,Orphanet:ORPHA3197 Hyperekplexia hereditary not provided 5 151859962 TCTTCCTGCGGCAGCAATGGAACGACCCCCGCCTGGCCTATAATGAATACCCTGACGACTC 370756367 48522 NM_001329595.1(KLHL10):c.937G>A (p.Ala313Thr) KLHL10 Dec 01, 2006 MedGen:C3554453,OMIM:615081 Spermatogenic failure 11 germline 17 41845378 AGCCCCACCAATGCCATTGAGGCATATGACGCTCGGGCAGACAGATGGGTGAATGTTACTT 886041675 264347 NM_003919.2(SGCE):c.299G>A (p.Trp100Ter) SGCE Apr 05, 2016 MedGen:CN517202 not provided germline 7 94628293 ATTTAATGGGTTACCCAGACCGACCTGGATGGCTTCGATATATCCAAAGGACACCATATAG -1 481802 NM_000127.2(EXT1):c.1092G>A (p.Trp364Ter) EXT1 Jan 22, 2018 MedGen:CN517202 not provided germline 8 117835516 CTGCGTCCCTGTGATGCTCAGCAATGGATGGGAGTTGCCATTCTCTGAAGTGATTAATTGG 863225254 214434 NM_004366.5(CLCN2):c.1397G>A (p.Gly466Glu) CLCN2 Sep 09, 2015 MedGen:C3810242,OMIM:615651,Orphanet:ORPHA363540 Leukoencephalopathy with ataxia germline 3 184354658 CTCTTTCTCTTCCCACCCCCCTCCCTGAAGGAGCAGCATTTGGGCGTCTGGTGGGTGAAAG 121918611 27971 NM_003052.4(SLC34A1):c.439G>A (p.Val147Met) SLC34A1 Sep 26, 2002 MedGen:C2676786,OMIM:612286 Nephrolithiasis/osteoporosis, hypophosphatemic, 1 germline 5 177386473 TTCAAGGATAACGCCATCCTGTCCAACCCGGTGGCCGGGCTGGTGGTGGGGATCCTGGTGA 199422154 34424 NM_018136.4(ASPM):c.3082G>A (p.Gly1028Arg) ASPM Sep 01, 2009 MedGen:C1837501,OMIM:608716 Primary autosomal recessive microcephaly 5 not provided 1 197125046 TCACGAGGAATTGAATTAAGTGATGAGCATGGTAAAAACTGAGTAGAGGTAAAACTTATTC 587779813 132791 NM_000051.3(ATM):c.1235G>A (p.Trp412Ter) ATM Mar 25, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline 11 108249102 AGTCACAGAATGATTTTGATCTTGTGCCTTGGTAAAGTGTTACCATTTTCTCATTCAGTGT 387906635 38680 NM_007327.3(GRIN1):c.1984G>A (p.Glu662Lys) GRIN1 Mar 11, 2011 MedGen:C3280282,OMIM:614254 Neurodevelopmental disorder with or without hyperkinetic movements and seizures, autosomal dominant germline 9 137162710 GCGGCCTTCCTGGTGCTGGACCGGCCGGAGGAGCGCATCACGGGCATCAACGACCCTCGGG 754162070 237797 NM_016111.3(TELO2):c.1826G>A (p.Arg609His) TELO2 Dec 09, 2016 MedGen:C4310778,OMIM:616954;MedGen:CN517202 You-Hoover-Fong syndrome;not provided germline 16 1502986 TCTATGCCCTCAACTACAGCCTCCGGCAGCGCATGGACATCCTGGATGTAAGTGCCTCCTG 114378922 17926 NM_032531.3(KIRREL3):c.1007G>A (p.Arg336Gln) KIRREL3 Dec 01, 2008 MedGen:C2675487,OMIM:612581 Mental retardation, autosomal dominant 4 germline 11 126446877 TTCTTCTTCCTCACATCGCAGTTGGGCCCCGGATGACCACAGAACCCCAATCCTTGCTCGT 431905504 38640 NM_001044.4(SLC6A3):c.1269+1G>A SLC6A3 May 11, 2017 MedGen:C2751067,OMIM:613135,Orphanet:ORPHA238455;MedGen:CN517202 Infantile Parkinsonism-dystonia;not provided germline 5 1411242 ATGCTGCTCACCCTGGGTATCGACAGCGCCGTGAGTAACCCGCACCGCCCGGCCCTGTCCT 104894704 21118 NM_004917.4(KLK4):c.458G>A (p.Trp153Ter) KLK4 Jan 01, 2011 MedGen:C2673922,OMIM:204700 Amelogenesis imperfecta, hypomaturation type, IIA1 germline 19 50908596 CCGCGGGGAACTCTTGCCTCGTTTCTGGCTGGGGTCTGCTGGCGAACGGTGAGCTCACGGG 78838117 22016 NM_002555.5(SLC22A18):c.257G>A (p.Arg86His) SLC22A18 Oct 10, 2013 MedGen:C4016802 Rhabdomyosarcoma, somatic somatic 11 2909210 GCCCCTCGGCCCCCAGGTTCGCAGACCAGCGCGGGGCGCGGGCGGCGCTCACGCTCTCCTT 72653137 32329 NM_000088.3(COL1A1):c.2552G>A (p.Gly851Asp) COL1A1 Oct 03, 1997 MedGen:C0268360,OMIM:166210,SNOMED CT:86470003 Osteogenesis imperfecta, recessive perinatal lethal germline 17 50190008 CTGGCCCTGCCGGACCCGCTGGACCCCCTGGCCCCATTGTGAGTGGCTTGGCCCTCTGTGC 121434407 21502 NM_001003722.1(GLE1):c.1706G>A (p.Arg569His) GLE1 Feb 01, 2008 MedGen:C1854664,OMIM:253310,Orphanet:ORPHA1486 Lethal congenital contracture syndrome 1 germline 9 128536414 AAGTGGAGCAGCAAGACAACTTTCTAAAACGCATGTCAGGGATGATCCGTCTCTACGCTGC 121918398 32914 NM_000041.3(APOE):c.875G>A (p.Arg292His) APOE May 01, 1993 na APOE4 VARIANT germline 19 44909171 GGTTCGAGCCCCTGGTGGAAGACATGCAGCGCCAGTGGGCCGGGCTGGTGGAGAAGGTGCA 118203991 16332 NM_018006.4(TRMU):c.815G>A (p.Gly272Asp) TRMU Sep 01, 2009 MedGen:C2751567,OMIM:613070 Liver failure acute infantile germline 22 46353809 ATACCTTGGGCCAGAGAGCAAACATAGGTGGCCTGAGAGAGCCCTGGTACGTGGTGGAGAA 267607914 96367 NM_000251.2(MSH2):c.212-1G>A MSH2 Aug 29, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Lynch syndrome;not provided germline;unknown 2 47408400 AAATCTGTAATGTACTTTTTTTTTTTTTAAGGAGCAAAGAATCTGCAGAGTGTTGTGCTTA 370667926 39399 NM_015979.3(MED23):c.1850G>A (p.Arg617Gln) MED23 Feb 13, 2017 MedGen:C3280265,OMIM:614249;MedGen:CN517202 Mental retardation, autosomal recessive 18;not provided germline 6 131603129 TACACACACTCCTTGAGATGTTTAGCTACCGGATGCATCATATTCAGCCTCATTACAGAGT 119103253 17341 NM_005609.3(PYGM):c.1963G>A (p.Glu655Lys) PYGM Jan 01, 1995 MedGen:C0017924,OMIM:232600,Orphanet:ORPHA368,SNOMED CT:55912009 Glycogen storage disease, type V germline 11 64751331 TTCCTGGAGAACTACCGAGTCTCACTGGCCGAGAAAGGTGGGTGCTGCCAACAGGGACCCT 104894280 15523 NM_000317.2(PTS):c.286G>A (p.Asp96Asn) PTS Jan 01, 1998 MedGen:C0878676,OMIM:261640,Orphanet:ORPHA13 6-pyruvoyl-tetrahydropterin synthase deficiency germline 11 112233205 CAGCCCCTTGATCATAAGAATCTGGATATGGATGTGCCATACTTTGCAGATGTGGTGAGGT 111033214 52378 NM_000260.3(MYO7A):c.3508G>A (p.Glu1170Lys) MYO7A Oct 28, 2006 MedGen:C1568247,OMIM:276900,Orphanet:ORPHA231169 Usher syndrome, type 1 germline 11 77189348 CCTCCCTTGCCCTGCTGCCTGCCCAGGGACGAGATCTACTGCCAGATCAGCAAGCAGCTGA 121918482 28347 NM_000506.3(F2):c.1292G>A (p.Arg431His) F2 Nov 01, 1992 na DYSPROTHROMBINEMIA PROTHROMBIN HIMI-II germline 11 46728157 ACCTTCTGGTGCGCATTGGCAAGCACTCCCGCACCAGGTACAGAACTGGTGGCCCGTGGGT 587779601 107061 NM_000090.3(COL3A1):c.592G>A (p.Gly198Arg) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188988599 TTTACATATTCTACTCACTAGGGATCTCCAGGATACCAAGGACCCCCTGGTGAACCTGGGC 104893664 20457 NM_014585.5(SLC40A1):c.800G>A (p.Gly267Asp) SLC40A1 Dec 01, 2005 MedGen:C1853733,OMIM:606069,Orphanet:ORPHA139491 Hemochromatosis type 4 germline 2 189564186 CAAAACCCCTGGAGGGAACTCATCTAATGGGTGTGAAAGACTCTAACATCCATGAGCTTGA -1 423238 NM_000465.3(BARD1):c.654G>A (p.Trp218Ter) BARD1 - Human Phenotype Ontology:HP:0100013,MeSH:D001943,MedGen:C1458155,Orphanet:ORPHA180250,SNOMED CT:126926005 Neoplasm of the breast germline 2 214781220 GAAAACTTTAGCTGAAATCAACCAAAAATGGAATTTAGAGGCAGAAAAAGAAGATGGTGAA 33974936 30444 NM_000518.4(HBB):c.114G>A (p.Trp38Ter) HBB Jun 30, 2017 MedGen:C0005283,OMIM:613985,Orphanet:ORPHA848,SNOMED CT:65959000;MedGen:C0271980,SNOMED CT:86715000;MedGen:CN517202 beta Thalassemia;beta^0^ Thalassemia;not provided germline;unknown 11 5226778 CACCCTTAGGCTGCTGGTGGTCTACCCTTGGACCCAGAGGTTCTTTGAGTCCTTTGGGGAT 28937887 19662 NM_021830.4(TWNK):c.1001G>A (p.Arg334Gln) TWNK Apr 07, 2017 MedGen:C0751651,Orphanet:ORPHA68380;MedGen:C1868097 Mitochondrial diseases;Progressive external ophthalmoplegia with mitochondrial DNA deletions, digenic germline 10 100989211 AACTGAACCCCAAACGATGCTTCTTGGTGCGACCAGGAGACCAGCAACCCCGTCCCCTGGA 121909101 22308 NM_005603.5(ATP8B1):c.1660G>A (p.Asp554Asn) ATP8B1 Mar 20, 2014 MedGen:C0268312,OMIM:211600,Orphanet:ORPHA172,SNOMED CT:74162007 Progressive intrahepatic cholestasis germline 18 57674993 GGTCAGCTCAACTACCAGGCAGCCTCTCCCGATGAAGGTGCCCTGGTAAACGCTGCCAGGA 121918612 27961 NM_000702.3(ATP1A2):c.901G>A (p.Gly301Arg) ATP1A2 Sep 01, 2004 MedGen:C1865322,OMIM:602481 Familial hemiplegic migraine type 2 germline 1 160127704 CAGCTGATCACAGGGGTCGCTGTATTCCTGGGGGTCTCCTTCTTCGTGCTCTCCCTCATCC 121918723 27528 NM_000359.2(TGM1):c.1166G>A (p.Arg389His) TGM1 Oct 06, 2017 MedGen:C3536797,OMIM:242300;MedGen:CN517202 Autosomal recessive congenital ichthyosis 1;not provided germline 14 24258667 ACCCCAACCTTCGCTCCTCCACAGTGCTGCGCTGCCTGGGTCTGGCCACCCGTACTGTCAC 794728212 197716 NM_000138.4(FBN1):c.3964+1G>A FBN1 Mar 30, 2014 MedGen:CN517202 not provided germline 15 48481654 CCGGCAAAAAAGGAAAAACTGGCTGTACAGGTGTGTTTGTTCAAGTAGAACAATAAAATAT 587777160 106643 NM_144628.3(TBC1D20):c.672G>A (p.Trp224Ter) TBC1D20 Dec 05, 2013 MedGen:C3810265,OMIM:615663 Warburg micro syndrome 4 germline 20 440344 CATCTTTGCCCTCAGCTGGCTCATCACCTGGTTTGGGCATGTCCTGTCTGACTTCAGGCAC 587779448 106882 NM_000090.3(COL3A1):c.3417+5G>A (p.Gly1122_Arg1139del+) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189007943 GCAGTCCAGGACCTGCAGGCCCCAGAGTAAGTAGCACAGAAAGATATTACAGGTCCACATG 45481704 58366 NM_000548.4(TSC2):c.2356-1G>A TSC2 Dec 21, 2015 MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000;MedGen:CN517202 Tuberous sclerosis syndrome;not provided germline 16 2074199 GGTGGGGCCTGAGGTGTCCTGTCTCCTGCAGCGCGAGATGGTCTACTGCCTGGAGCAGGGC 121912901 32280 NM_000089.3(COL1A2):c.1640G>A (p.Gly547Asp) COL1A2 Aug 17, 2015 MedGen:C0268360,OMIM:166210,SNOMED CT:86470003 Osteogenesis imperfecta, recessive perinatal lethal germline 7 94413922 AGGGTGTTCAAGGTGGAAAAGGTGAACAGGGTCCCCCTGGTCCTCCAGGCTTCCAGGTAAG 690016545 171817 NM_004984.3(KIF5A):c.694G>A (p.Asp232Asn) KIF5A Aug 12, 2014 MedGen:C1858712,OMIM:604187,Orphanet:ORPHA100991 Spastic paraplegia 10 germline 12 57567598 CAGAAGCTCAGTGGGAAGCTGTATCTGGTGGACCTGGCAGGGAGTGAGAAGGTAGGGGGTC 104886125 35770 NM_000495.4(COL4A5):c.1607G>A (p.Gly536Asp) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108597396 ACTCATTTCAGGGCATTCCAGGAGCTCCAGGTGCTCCAGGCTTTCCTGGATCTAAAGGTGA 1131691126 420766 NM_000267.3(NF1):c.662G>A (p.Trp221Ter) NF1 Apr 06, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN169374 Hereditary cancer-predisposing syndrome;not specified germline 17 31181717 GACATGTGGTTCTTTATTTATAGGCATTTTGGAACTGGGTAGAAAATTATCCAGATGAATT 397514500 48026 NM_005709.3(USH1C):c.308G>A (p.Arg103His) USH1C Jan 23, 2013 MedGen:C1848604,OMIM:276904 Usher syndrome, type 1C germline 11 17531233 TGCACCCCGAAGGCCTCGGCCTGAGTGTGCGTGGTGGCCTGGAGTTTGGCTGTGGGCTCTT 745927258 265217 NM_015560.2(OPA1):c.1140+1G>A OPA1 Mar 08, 2016 MedGen:C0338508,OMIM:165500,Orphanet:ORPHA98672,SNOMED CT:2065009 Dominant hereditary optic atrophy germline 3 193643050 GTGAAAGAAGGCTGTACCGTTAGCCCTGAGGTAAGGGTTGCAATTCATTTCAGTGACGTTT 59461468 426778 NM_001171.5(ABCC6):c.*38G>A ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16150095 CCCTCAACCGTACCCCAGTTGGACCAGCCCGCACAGCCTGCAGTGCTGGAGATGGAAGTGA 67273048 364053 NM_000052.6(ATP7A):c.2867G>A (p.Trp956Ter) ATP7A Nov 04, 2016 MedGen:CN517202 not provided de novo X 78021030 TTTTTGTTTCCATTGCCACCCTCTTGGTATGGATTGTAATTGGATTTCTGAATTTTGAAAT 121909491 22046 NM_002316.3(LMX1B):c.668G>A (p.Arg223Gln) LMX1B Dec 01, 1998 MedGen:C0027341,OMIM:161200,SNOMED CT:22199006 Nail-patella syndrome germline 9 126693250 GGAAGGACCCGCGGAGGCCCAAGCGACCCCGGACCATCCTCACCACGCAGCAGCGAAGAGC 104886122 35763 NM_000495.4(COL4A5):c.1562G>A (p.Gly521Asp) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108597043 CTGGACAGAAAGGGGAAAAAGGACAAGCTGGTGCAACTGGTCCCAAAGGATTACCAGTAAG 143141689 39188 NM_004153.3(ORC1):c.314G>A (p.Arg105Gln) ORC1 Jun 14, 2016 MedGen:C1868684,Orphanet:ORPHA2554;MedGen:CN030358,OMIM:224690 Meier-Gorlin syndrome;Meier-Gorlin syndrome 1 germline 1 52397773 TCCCTGCCTGTAAACGGCATTTGTTGGGCCGGAAGCCTGGTGCACAGGAAATATTCTGGTA 398122617 97006 NM_000059.3(BRCA2):c.9573G>A (p.Trp3191Ter) BRCA2 Sep 09, 2016 MedGen:C2675520,OMIM:612555;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 2;Hereditary cancer-predisposing syndrome germline 13 32396969 GCATATACTGCATGCAAATGATCCCAAGTGGTCCACCCCAACTAAAGACTGTACTTCAGGG 672601346 171696 NM_001845.5(COL4A1):c.2263G>A (p.Gly755Arg) COL4A1 Jun 01, 2012 MedGen:C1843512,OMIM:607595 Brain small vessel disease with hemorrhage germline 13 110179352 CCAGGTCTTCCCGGCATTCCTGGCACACCCGGGGAGAAGGGGAGCATTGGGGTACCAGGCG 730880270 19537 NM_016180.4(SLC45A2):c.563-1G>A SLC45A2 Nov 01, 2001 MedGen:C1847836,OMIM:606574,Orphanet:ORPHA79435 Oculocutaneous albinism type 4 germline 5 33964017 ATATGCTAACATAGCTTTTCTTGCTTTCCAGGTTTTGGAGGTGCCCTGGGTTACCTTTTGG 104886237 35979 NM_000495.4(COL4A5):c.3508G>A (p.Gly1170Ser) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108666549 CCAGGGCCTCCAGGCGAAAAAGGCAAACCCGGTCAAGATGGTATTCCTGGACCAGCTGGAC 1085307254 414190 NM_001204.6(BMPR2):c.727G>A (p.Glu243Lys) BMPR2 - MedGen:C0152171,OMIM:178600,SNOMED CT:26174007 Primary pulmonary hypertension germline 2 202518927 TCCTTTGCAAACCGTCAGAATTTTATCAACGAAAAGAACATTTACAGAGTGCCTTTGATGG 369486176 259229 NM_176787.4(PIGN):c.1434+5G>A PIGN Sep 28, 2016 MedGen:C3279775,OMIM:614080,Orphanet:ORPHA280633 Multiple congenital anomalies-hypotonia-seizures syndrome 1 germline 18 62113129 TAAAAGGTGTTAGTAAAGAAGTGAAGGTACGTTTAGAAAATGTGAGGATTCAGATGATGGT 137852586 485836 NM_000044.4(AR):c.1739G>A (p.Cys580Tyr) AR Jan 18, 2005 MedGen:C0039585,OMIM:300068,SNOMED CT:12313004 Androgen resistance syndrome germline X 67643378 GTCACTATGGAGCTCTCACATGTGGAAGCTGCAAGGTCTTCTTCAAAAGAGCCGCTGAAGG 886041595 265099 NM_001039590.2(USP9X):c.1140G>A (p.Trp380Ter) USP9X Nov 23, 2016 MedGen:CN517202 not provided germline X 41141410 TCGACATGGTAATCCTGAGGAGGAAGAGTGGCTCACAGCTGAACGAATGGCAGTGAGTCTT 781687341 384408 NM_001163817.1(DHCR7):c.1328G>A (p.Arg443His) DHCR7 Sep 14, 2016 MedGen:C0175694,OMIM:270400,Orphanet:ORPHA818,SNOMED CT:43929004 Smith-Lemli-Opitz syndrome paternal 11 71435475 TCATCTACATGGCCATCCTGCTGACCCACCGCTGCCTCCGGGACGAGCACCGCTGCGCCAG 28931595 32065 NM_004004.5(GJB2):c.535G>A (p.Asp179Asn) GJB2 Dec 22, 2016 MedGen:C2675750,OMIM:601544 Deafness, autosomal dominant 3a germline 13 20189047 TGCAACGCCTGGCCTTGTCCCAACACTGTGGACTGCTTTGTGTCCCGGCCCACGGAGAAGA 200948870 414214 NM_001204.6(BMPR2):c.908G>A (p.Arg303His) BMPR2 - MedGen:C0152171,OMIM:178600,SNOMED CT:26174007 Primary pulmonary hypertension germline 2 202520142 TCCACACAAGTGACTGGGTAAGCTCTTGCCGTCTTGCTCATTCTGTTACTAGAGGACTGGC 111293259 206868 NM_004543.4(NEB):c.3774+1G>A NEB Dec 01, 2014 MedGen:CN187052 Nemaline myopathy 2, autosomal recessive germline 2 151677564 GCAAAACAGAACACGAAGCAAGTCAGTGATGTGAGTACAATAAAATAGAGAGGACAGAGGA 28928871 31289 NM_000145.3(FSHR):c.1699G>A (p.Asp567Asn) FSHR Aug 21, 2003 MedGen:C0085083,OMIM:608115,Orphanet:ORPHA64739,SNOMED CT:129635004 Ovarian hyperstimulation syndrome germline 2 48963122 CGGAACCCCAACATCGTGTCCTCCTCTAGTGACACCAGGATCGCCAAGCGCATGGCCATGC 281874722 35606 NM_000495.4(COL4A5):c.385G>A (p.Gly129Arg) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108571413 TCCATGCTCTTTATTTTTAACTCCTTCTAGGGAGAACGTGGATTTCCAGGCAGTCCCGGTT 776483190 185796 NM_005957.4(MTHFR):c.137G>A (p.Arg46Gln) MTHFR - MedGen:C1856058,OMIM:236250 Homocysteinemia due to MTHFR deficiency germline 1 11802980 GCCTGGACCCCGAGCGGCATGAGAGACTCCGGGAGAAGATGAGGCGGCGATTGGAATCTGG 863224493 213298 NM_000267.3(NF1):c.7419G>A (p.Trp2473Ter) NF1 Mar 15, 2016 Human Phenotype Ontology:HP:0000997,MedGen:C1860335;Human Phenotype Ontology:HP:0000957,MedGen:C0221263;Human Phenotype Ontology:HP:0000750,MedGen:C0454644;Human Phenotype Ontology:HP:0001472;Human Phenotype Ontology:HP:0030052,MedGen:C1834297;Human Phenotype Ontology:HP:0000023,MedGen:C0019294;MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003;Human Phenotype Ontology:HP:0001328,MedGen:C4025790 Axillary freckling;Cafe-au-lait spot;Delayed speech and language development;Familial predisposition;Inguinal freckling;Inguinal hernia;Neurofibromatosis, type 1;Specific learning disability germline 17 31352281 TTTCAGGACACTAAAGGAGACTCAGCCATGGTCCTCTCCCAAAGGTTCTGAAGGATACCTT 398124268 101458 NM_014141.5(CNTNAP2):c.2153G>A (p.Trp718Ter) CNTNAP2 Aug 16, 2012 MedGen:CN517202 not provided germline 7 147903619 TTGGCAAAGCCAACGAGAAGCACTACTACTGGGGAGGCTCTGGGCCTGGAATCCAGAAATG 28941783 18207 NM_000187.3(HGD):c.481G>A (p.Gly161Arg) HGD Mar 09, 2016 MedGen:C0002066,OMIM:203500,Orphanet:ORPHA56 Alkaptonuria germline;unknown 3 120647041 CCCTGTCTTTTTTTGTCAGTTCCGCAGAAAGGGAACCTTCTCATTTACACCGAGTTTGGCA 121912749 32808 NM_000342.3(SLC4A1):c.388G>A (p.Gly130Arg) SLC4A1 Sep 01, 1998 MedGen:C2675212,OMIM:612653 Spherocytosis type 4 germline 17 44260501 CTCCTAGACCTGCAAGAGACCTCCCTGGCTGGAGTGGCCAACCAACTGCTAGACAGGTTTA 730880620 179377 NM_000256.3(MYBPC3):c.505+1G>A MYBPC3 Aug 04, 2017 Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569;MedGen:CN517202 Hypertrophic cardiomyopathy;not provided germline 11 47350013 TGCGGCCACAGGATGGCGAGGTGACCGTGGGTGAGTGTGAGCTGCTGTGCCCAGCATTGGG 786205055 15961 NM_014798.2(PLEKHM1):c.296+1G>A PLEKHM1 Apr 01, 2007 MedGen:C1969093,OMIM:611497,Orphanet:ORPHA210110 Osteopetrosis autosomal recessive 6 germline 17 45477899 CTGGCCCCTCCTGAAAGCTGTCACCCACAAGTGAGATTTAGCTGGAGAGGTTTTGCTTTGC 796053370 202316 NM_003165.3(STXBP1):c.1359+1G>A STXBP1 Nov 15, 2012 MedGen:CN517202 not provided germline 9 127676754 GCTCACCTCGGCGTGCCCATCGTCACCGATGTAAGAGGCCAGCTCAGCTTCCGGGGGAGGT 797045025 205064 NM_001193416.2(DDX3X):c.977G>A (p.Arg326His) DDX3X Oct 17, 2017 MedGen:C4085582,OMIM:300958,Orphanet:ORPHA457260;MedGen:CN517202 Mental retardation, X-linked 102;not provided germline X 41344351 GATGCCATTTGTTAGTAGCCACTCCAGGACGTCTAGTGGATATGATGGAAAGAGGAAAGAT 398124036 100650 NM_004006.2(DMD):c.6906G>A (p.Trp2302Ter) DMD Mar 31, 2014 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009;MedGen:C3668940,OMIM:302045;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Becker muscular dystrophy;Dilated cardiomyopathy 3B;Duchenne muscular dystrophy germline X 31929602 AAATAAGCTCAAGCAGACAAATCTCCAGTGGATAAAGGTTAGACATTAACCATCTCTTCCG 67651903 103060 NM_000531.5(OTC):c.317G>A (p.Gly106Glu) OTC - MedGen:CN517202 not provided unknown X 38381360 TTTTTATTGTAGGCTTTGCACTTCTGGGAGGACATCCTTGTTTTCTTACCACACAAGATAT 312262827 49542 NM_003611.2(OFD1):c.412G>A (p.Gly138Ser) OFD1 Feb 28, 2013 MedGen:C1510460,OMIM:311200,Orphanet:ORPHA2750,SNOMED CT:52868006 Oral-facial-digital syndrome not provided X 13739032 GTTTCAGGATCTGATAAAGAAAATCAAAAAGGTAGGAGCCGTCATCTTTGTAGAGAACAGC 281864919 46901 NM_000171.3(GLRA1):c.1259G>A (p.Arg420His) GLRA1 Jun 14, 2017 MedGen:C1835614,OMIM:149400,Orphanet:ORPHA3197;MedGen:C1835614,OMIM:149400,Orphanet:ORPHA3197;MedGen:CN517202 Hyperekplexia hereditary;Hyperekplexia hereditary;not provided germline 5 151822764 AGAGGGCCAAGAAGATCGACAAAATATCCCGCATTGGCTTCCCCATGGCCTTCCTCATTTT 1060500046 397398 NM_007327.3(GRIN1):c.1923G>A (p.Met641Ile) GRIN1 Aug 10, 2016 MedGen:C3280282,OMIM:614254 Neurodevelopmental disorder with or without hyperkinetic movements and seizures, autosomal dominant germline 9 137162649 CCTGGGCATGGTGTGGGCCGGCTTTGCCATGATCATCGTGGCCTCCTACACCGCCAACCTG 587779439 106871 NM_000090.3(COL3A1):c.3301G>A (p.Gly1101Arg) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189007545 CGTGGTGACAAAGGTGAAACAGGTGAACGTGGAGCTGCTGGCATCAAAGGACATCGAGGAT 797044570 188188 NM_002055.4(GFAP):c.205G>A (p.Glu69Lys) GFAP Jan 08, 2015 MedGen:C0270726,OMIM:203450,Orphanet:ORPHA58,SNOMED CT:81854007 Alexander's disease germline 17 44915282 AATGCTGGCTTCAAGGAGACCCGGGCCAGTGAGCGGGCAGAGATGATGGAGCTCAATGACC 745655924 22830 NM_004482.3(GALNT3):c.1524+1G>A GALNT3 Jan 01, 2005 MedGen:C1876187,OMIM:211900,OMIM:610233,Orphanet:ORPHA306661 Tumoral calcinosis, familial, hyperphosphatemic germline 2 165754931 CCAGACCTTAATCCTGTTATATCTGGATACGTGAGTATTTTCCTGTTCCTTTTTTAATTAA 863225154 214199 NM_023073.3(CPLANE1):c.8855+1G>A CPLANE1 Feb 23, 2015 MedGen:C3553264,OMIM:614615 Joubert syndrome 17 unknown 5 37122429 GAGACAAAAGATGAAGCATGAAAAAGACAGGTGAGTTTGGTAGCTGTAACCCTGTGTTTTC 397514476 39908 NM_001012515.2(FECH):c.571G>A (p.Ala191Thr) FECH Sep 01, 2007 MedGen:C0162568,OMIM:177000,Orphanet:ORPHA79278,SNOMED CT:51022005 Erythropoietic protoporphyria germline 18 57566492 GAAGAGATGGAGAGAGATGGCCTAGAAAGGGCTATTGCTTTCACACAGTATCCACAGTACA 991082382 487917 NM_000152.4(GAA):c.1735G>A (p.Glu579Lys) GAA Sep 22, 2016 MedGen:C0017921,OMIM:232300,Orphanet:ORPHA365,SNOMED CT:124462004,SNOMED CT:237967002 Glycogen storage disease, type II germline 17 80112081 TACAACCTGCACAACCTCTACGGCCTGACCGAAGCCATCGCCTCCCACAGGTGAGGGCCAC 587779584 107043 NM_000090.3(COL3A1):c.1618G>A (p.Gly540Arg) COL3A1 Mar 22, 2017 MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000;MedGen:CN517202 Ehlers-Danlos syndrome, type 4;not provided germline 2 188996134 CAACTGACTTCTTTACTTCAGGGCATGCCCGGAAGTCCAGGAGGACCAGGAAGTGATGGGA 267607021 21224 NM_001014.4(RPS10):c.3G>A (p.Met1Ile) RPS10 Feb 12, 2010 MedGen:C2750081,OMIM:613308 Diamond-Blackfan anemia 9 germline 6 34425219 GCTCTTGACAATCGTCTCCTTCTTGCAGATGTTGATGCCTAAGAAGAACCGGATTGCCATT 886041133 265118 NM_000044.4(AR):c.2668G>A (p.Val890Met) AR Nov 15, 2016 MedGen:C0039585,OMIM:300068,SNOMED CT:12313004;MedGen:CN517202 Androgen resistance syndrome;not provided germline X 67723746 GACCTGCTAATCAAGTCACACATGGTGAGCGTGGACTTTCCGGAAATGATGGCAGAGATCA 199472941 78182 NM_000238.3(KCNH2):c.1825G>A (p.Asp609Asn) KCNH2 Mar 15, 2017 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MeSH:D008133,MedGen:C0023976,SNOMED CT:9651007;MedGen:CN517202 Congenital long QT syndrome;Long QT syndrome;not provided germline 7 150951568 AGCAGCGGCCTGGGCGGCCCCTCCATCAAGGACAAGTATGTGACGGCGCTCTACTTCACCT 61750639 105310 NM_000350.2(ABCA4):c.5929G>A (p.Gly1977Ser) ABCA4 Jun 23, 2016 MedGen:CN517202 not provided germline 1 94007710 TGCTTTGGCCTCCTGGGAGTGAATGGTGCCGGCAAAACAACCACATTCAAGATGCTCACTG 387906311 18967 NM_000520.5(HEXA):c.672+1G>A HEXA Dec 20, 2016 MedGen:C0039373,OMIM:272800,Orphanet:ORPHA845,SNOMED CT:111385000;na;MedGen:CN517202 Tay-Sachs disease;Tay-sachs disease, juvenile/adult;not provided germline;unknown 15 72351132 AGCTTCACTTTTCCAGAGCTCATGAGAAAGGTATGTTCCCGTTTCACTCAGACCAAGTTTA 886038205 249229 NM_001243473.2(B9D1):c.526G>A (p.Gly176Arg) B9D1 Sep 23, 2016 MedGen:C4310706,OMIM:617120 Joubert syndrome 27 germline 17 19343795 ACCCCAAGGTGGTGGCTCAGGGTGAAGGCCGGGAAGGTAAAGCTCCCTCCCCTCTCTTACC 145100473 65567 NM_001169109.1(SCO2):c.341G>A (p.Arg114His) SCO2 May 02, 2013 MedGen:C1837148,OMIM:608908 Myopia 6 germline 22 50524071 TCCACCTGCTGGATCACAGAGGCCGGGCTCGCTGCAAGGCTGACTTCCGGGGCCAGTGGGT 527236066 152830 NM_001142800.1(EYS):c.7919G>A (p.Trp2640Ter) EYS - Human Phenotype Ontology:HP:0000547,MeSH:D012174,MedGen:C0035334,OMIM:268000,Orphanet:ORPHA791,SNOMED CT:28835009 Retinitis pigmentosa not provided 6 63762613 CAACCCACAGCTGCAATTGTACCACTGGGTGGAAAGGATCATTCTGCACAGAGACAGTTTC 606231147 19937 NM_022458.3(LMBR1):c.423+4917G>A LMBR1 Aug 01, 2014 MedGen:C1861099,OMIM:188740,Orphanet:ORPHA988 Tibia, hypoplasia or aplasia of, with polydactyly germline 7 156791472 GGCAAACTTACATAAAAGTGACCTTGTACTGTATTTTATGACCAGATGACTTTTTCCCCCC 180177151 24977 NM_002764.3(PRPS1):c.193G>A (p.Asp65Asn) PRPS1 Jan 01, 2010 MedGen:C1844677,OMIM:304500,OMIM:304590 Deafness, X-linked 1 germline X 107639365 ATTGTTCAGAGTGGTTGTGGCGAAATCAATGACAATTTAATGGAGCTTTTGATCATGATTA 104886105 35711 NM_000495.4(COL4A5):c.1148G>A (p.Gly383Asp) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108586730 GAGGATTTCCTGGAATACAGGGTCCACCTGGCCTTCCTGGACCTCCAGGTAAATGAGATTG 200873900 24749 m.11696G>A MT-ND4 Sep 19, 2013 MedGen:C1839040,OMIM:500001;Human Phenotype Ontology:HP:0001112,MedGen:C0917796,OMIM:535000,Orphanet:ORPHA104,SNOMED CT:58610003 Leber hereditary optic neuropathy with dystonia;Leber's optic atrophy germline MT 11696 ATCCAAACCCCCTGAAGCTTCACCGGCGCAGTCATTCTCATAATCGCCCACGGGCTTACAT 267606675 16307 NM_194318.3(B3GLCT):c.1178G>A (p.Gly393Glu) B3GLCT Nov 01, 2009 MedGen:C0796012,OMIM:261540 Peters plus syndrome germline 13 31317679 GCACTGGTGGCTACAGCTACATCACGGGAGGAGGAGGGTAACTATGATCACAGCTTTCTTC 796052505 201880 NM_000816.3(GABRG2):c.316G>A (p.Ala106Thr) GABRG2 Oct 24, 2017 MedGen:C1843244,OMIM:607681;MedGen:C1969810,OMIM:611277;MedGen:CN517202;MedGen:CN169374 Epilepsy, childhood absence 2;Familial febrile seizures 8;not provided;not specified de novo;germline;unknown 5 162095551 ATGTATGTGAATAGCATTGGTCCAGTGAACGCTATCAATATGGTGAGTTTCCAAATAAAAT 398124052 100674 NM_004006.2(DMD):c.7682G>A (p.Trp2561Ter) DMD May 13, 2013 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009;MedGen:C3668940,OMIM:302045;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Becker muscular dystrophy;Dilated cardiomyopathy 3B;Duchenne muscular dystrophy germline X 31679565 TTATTCTAGTTGAAAGAATTCAGAATCAGTGGGATGAAGTACAAGAACACCTTCAGAACCG 387906920 39464 NM_023067.3(FOXL2):c.205G>A (p.Glu69Lys) FOXL2 Jun 01, 2011 MedGen:C2931135 Blepharophimosis, ptosis, and epicanthus inversus syndrome type 1 germline 3 138946518 TACGTGGCGCTCATCGCCATGGCGATCCGCGAGAGCGCGGAGAAGAGGCTCACGCTGTCCG 543267101 152757 NM_020745.3(AARS2):c.2893G>A (p.Gly965Arg) AARS2 Jun 10, 2014 MedGen:C4014588,OMIM:615889 Leukoencephalopathy, progressive, with ovarian failure germline 6 44300612 TGGGGCTCACGAGTGGTGGCCCAAGGCACCGGAAGCACTACTGACCTGGAAGCTGCCCTCA 199472687 77968 NM_000218.2(KCNQ1):c.421G>A (p.Val141Met) KCNQ1 Jul 31, 2017 EFO:EFO_0000275,Human Phenotype Ontology:HP:0005110,MedGen:C1963067;MeSH:D008133,MedGen:C0023976,SNOMED CT:9651007;MedGen:C1865019,OMIM:609621;MedGen:CN517202 Atrial fibrillation;Long QT syndrome;Short QT syndrome 2;not provided germline 11 2527962 CTCATCGTCCTGGTCTGCCTCATCTTCAGCGTGCTGTCCACCATCGAGCAGTATGCCGCCC 121908216 23534 NM_001127221.1(CACNA1A):c.4982G>A (p.Arg1661His) CACNA1A Apr 03, 2017 MedGen:C1720416,OMIM:108500,Orphanet:ORPHA97,SNOMED CT:420932006;MedGen:CN517202 Episodic ataxia type 2;not provided germline 19 13235702 AGAATAACTTCATCAACCTGAGCTTTCTCCGCCTCTTCCGAGCTGCCCGGCTCATCAAACT 886043794 272283 NM_001844.4(COL2A1):c.1023+1G>A COL2A1 May 16, 2016 MedGen:C0265279,OMIM:156550,Orphanet:ORPHA485,SNOMED CT:53974002 Kniest dysplasia germline 12 47992877 AGAGGACGGACTGGCCCTGCTGGCGCTGCGGTGAGTAATTGACAAAGCCAAACACCACCAT 387906620 38643 NM_002526.3(NT5E):c.1073G>A (p.Cys358Tyr) NT5E Feb 03, 2011 MedGen:C1859372,OMIM:211800,Orphanet:ORPHA289601 Calcification of joints and arteries germline 6 85487458 GCTCCTCTCAATCATGCCGCTTTAGAGAATGCAACATGGGCAACCTGATTTGTGATGCAAT 199473579 39004 NM_198056.2(SCN5A):c.1963G>A (p.Glu655Lys) SCN5A May 27, 2014 EFO:EFO_0000275,Human Phenotype Ontology:HP:0005110,MedGen:C1963067;MedGen:C3151464,OMIM:614022;MedGen:CN517202 Atrial fibrillation;Atrial fibrillation, familial, 10;not provided germline 3 38598978 TCCCAGGCTCCGTGTGTAGATGGCTTCGAGGAGCCAGGAGCACGGCAGCGGGCCCTCAGCG 754639936 359833 NM_006077.3(MICU1):c.1078-1G>A MICU1 Oct 19, 2016 MedGen:CN517202 not provided germline 10 72408038 CTGCCTTACCTTGCTGTCTCTCCTCTTGCAGGGTCTGACATTTCAGGAGGTGGAGAACTTC 141212743 76961 NM_002336.2(LRP6):c.1079G>A (p.Arg360His) LRP6 Sep 01, 2013 MedGen:C1970440,OMIM:610947 Coronary artery disease, autosomal dominant 2 germline 12 12181337 CAGACATTGTTCTGCAGTTAGAAGACATCCGTCATGCCATTGCCATAGATTACGATCCTGT 119476049 19388 NM_001127713.1(ATL1):c.650G>A (p.Arg217Gln) ATL1 Jun 01, 2002 MedGen:C2931355,OMIM:182600,Orphanet:ORPHA100984 Spastic paraplegia 3 germline 14 50613278 TTATTTTTTAGAGTCTGATATTTCTTGTTCGAGACTGGAGTTTCCCATACGAATTTTCATA 863225397 214577 NM_000251.2(MSH2):c.793-1G>A MSH2 Jun 29, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline;unknown 2 47414268 AAATCTTCGATTTTTAAATTCTTAATTTTAGGTTGCAGTTTCATCACTGTCTGCGGTAATC 62645957 105194 NM_000350.2(ABCA4):c.45G>A (p.Trp15Ter) ABCA4 Jan 01, 2016 MeSH:C535804,MedGen:C1855465,OMIM:248200;MedGen:CN517202 Stargardt disease 1;not provided germline 1 94121001 ACAGATACAGCTTTTGCTCTGGAAGAACTGGACCCTGCGGAAAAGGCAAAAGGTAACAGTT 371777049 268648 NM_206933.2(USH2A):c.908G>A (p.Arg303His) USH2A Dec 01, 2015 MedGen:C1848634,OMIM:276901 Usher syndrome, type 2A germline 1 216325540 TTCTCAGATTGCATGCCCAATCACATTGCCGTTGCCCTGGCAGCCACCCGCGGGTCCACCC 122467174 26457 NM_014009.3(FOXP3):c.3G>A (p.Met1Ile) FOXP3 Jun 01, 2006 MedGen:C0342288,OMIM:304790,Orphanet:ORPHA37042,SNOMED CT:237618001 Insulin-dependent diabetes mellitus secretory diarrhea syndrome germline X 49258503 ACGCAGCCTGCCCTTGGACAAGGACCCGATGCCCAACCCCAGGCCTGGCAAGCCCTCGGCC 727504421 178514 NM_003242.5(TGFBR2):c.1570G>A (p.Asp524Asn) TGFBR2 Apr 09, 2015 MedGen:C2697932,Orphanet:ORPHA60030,SNOMED CT:446263001;MedGen:CN517202 Loeys-Dietz syndrome;not provided germline 3 30691465 TGTGAGACGTTGACTGAGTGCTGGGACCACGACCCAGAGGCCCGTCTCACAGCCCAGTGTG 61753180 18833 NM_000372.4(TYR):c.140G>A (p.Gly47Asp) TYR Jan 26, 2017 MedGen:C1847024,OMIM:606952,Orphanet:ORPHA79434;MedGen:C0268494,OMIM:203100,Orphanet:ORPHA79431,SNOMED CT:6483008;MedGen:CN517202 Oculocutaneous albinism type 1B;Tyrosinase-negative oculocutaneous albinism;not provided germline 11 89178093 CACCGTGGAGCGGGGACAGGAGTCCCTGTGGCCAGCTTTCAGGCAGAGGTTCCTGTCAGAA 779184183 444937 NM_000545.6(HNF1A):c.812G>A (p.Arg271Gln) HNF1A Aug 14, 2017 MedGen:CN517202 not provided germline 12 120994262 AGGTGCGTGTCTACAACTGGTTTGCCAACCGGCGCAAAGAAGAAGCCTTCCGGCACAAGCT 121909538 33115 NM_001145.4(ANG):c.164G>A (p.Arg55Lys) ANG Apr 01, 2006 MedGen:C2678468,OMIM:611895 Amyotrophic lateral sclerosis type 9 germline 14 20693728 GGGATGACAGATACTGTGAAAGCATCATGAGGAGACGGGGCCTGACCTCACCCTGCAAAGA 886041300 263996 NM_172362.2(KCNH1):c.1070G>A (p.Arg357Gln) KCNH1 Apr 03, 2017 MedGen:CN517202 not provided germline 1 210920032 GCAGCCTGTTCAGCTCTCTAAAAGTTGTCCGGCTGCTCCGTCTTGGGCGAGTGGCCCGTAA -1 31495 NM_000138.4(FBN1):c.5788+1G>A FBN1 Oct 01, 2001 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006 Marfan syndrome germline 15 48446705 TCATCCTTTCTCACAACAATGACTGTATAGGTGCGTGTGCAAAATTGTGCATCAGCAAAGG 574132670 185787 NM_005957.4(MTHFR):c.548G>A (p.Arg183Gln) MTHFR - MedGen:C1856058,OMIM:236250 Homocysteinemia due to MTHFR deficiency germline 1 11800250 ACTACGCAGTGGACCTGGTGAAGCACATCCGAAGTGAGTTTGGTGACTACTTTGACATCTG 121908030 18731 NM_000527.4(LDLR):c.910G>A (p.Asp304Asn) LDLR Mar 30, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000;MedGen:C0020443 Familial hypercholesterolemia;Hypercholesterolaemia germline;inherited;not applicable 19 11107484 AAAGTCTGCAACATGGCTAGAGACTGCCGGGACTGGTCAGATGAACCCATCAAAGAGTGCG 267607640 77728 NM_170707.3(LMNA):c.1488+1G>A LMNA Feb 16, 2016 MedGen:C1834653,OMIM:159001,Orphanet:ORPHA264;MedGen:C0432291,OMIM:248370,Orphanet:ORPHA2457,SNOMED CT:109419009;MedGen:CN517202 Limb-girdle muscular dystrophy, type 1B;Mandibuloacral dysostosis;not provided germline 1 156137029 TTCACCCTGAAGGCTGGGCAGGTGGTGACGGTGAGTGGCAGGGCGCTTGGGACTCTGGGGA 118203889 24600 m.12207G>A MT-TS2 Sep 01, 2006 MedGen:C3151970 MERRF/MELAS overlap syndrome germline MT 12207 ACAACAGAGGCTTACGACCCCTTATTTACCGAGAAAGCTCACAAGAACTGCTAACTCATGC -1 488009 NM_000178.3(GSS):c.-9+5G>A GSS Apr 13, 2017 Human Phenotype Ontology:HP:0003343,MedGen:C0398746,OMIM:266130,Orphanet:ORPHA289846,SNOMED CT:234589002 Gluthathione synthetase deficiency germline 20 34955722 ACCGTTCGCGGAGGAAAGGCGAACTAGTAGGTTGGGGCGGCCACGGCGGCCGGCATGGGTC 876658740 234231 NM_000051.3(ATM):c.5798G>A (p.Trp1933Ter) ATM May 03, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0027672,SNOMED CT:699346009 Ataxia-telangiectasia syndrome;Hereditary cancer-predisposing syndrome germline;unknown 11 108310195 CTTCAGGAACAATTTTTAATGATGCTTTCTGGCTGGATTTAAATTATCTAGAAGTTGCCAA 876658667 233077 NM_000038.5(APC):c.3146G>A (p.Trp1049Ter) APC Mar 24, 2017 MedGen:C2713442,OMIM:175100;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN169374 Familial adenomatous polyposis 1;Hereditary cancer-predisposing syndrome;not specified germline 5 112838740 GAAGGCAAAGTCCTTCACAGAATGAAAGATGGGCAAGACCCAAACACATAATAGAAGATGA 121912506 29463 NM_000238.3(KCNH2):c.2464G>A (p.Val822Met) KCNH2 Apr 08, 2017 MedGen:CN230736;MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MedGen:C0035828,OMIM:192500,Orphanet:ORPHA101016,SNOMED CT:20852007;MedGen:C3150943,OMIM:613688 Cardiovascular phenotype;Congenital long QT syndrome;Long QT syndrome 1;Long QT syndrome 2 germline;unknown 7 150948984 TATGCAAGGCCTGGCAAGTCGAACGGGGATGTGCGGGCCCTCACCTACTGTGACCTACACA 76992529 28465 NM_000371.3(TTR):c.424G>A (p.Val142Ile) TTR Jul 25, 2017 MedGen:C3151471;MedGen:C2751492,OMIM:105210,SNOMED CT:43532007,SNOMED CT:442012008;MedGen:C2751492,OMIM:105210,SNOMED CT:43532007,SNOMED CT:442012008;Human Phenotype Ontology:HP:0001638,MedGen:C0878544,Orphanet:ORPHA167848,SNOMED CT:85898001;MedGen:CN230736;MedGen:C0007286,OMIM:115430;MedGen:C2750824,OMIM:145680;MedGen:CN517202;MedGen:CN169374 Amyloid Cardiomyopathy, Transthyretin-related;Amyloidogenic transthyretin amyloidosis;Amyloidogenic transthyretin amyloidosis;Cardiomyopathy;Cardiovascular phenotype;Carpal tunnel syndrome;Dystransthyretinemic euthyroidal hyperthyroxinemia;not provided;not specified germline;unknown 18 31598655 AGCCCCTACTCCTATTCCACCACGGCTGTCGTCACCAATCCCAAGGAATGAGGGACTTCTC 730880558 179275 NM_000256.3(MYBPC3):c.1898-1G>A MYBPC3 Aug 14, 2012 MedGen:CN517202 not provided germline 11 47341033 CCCGTGCTACTTGCTCTTCCTTCTCTTGCAGAGGTCAAGATTGACTTCGTACCCAGGCAGG 148092995 360618 NM_000487.5(ARSA):c.979G>A (p.Gly327Ser) ARSA Apr 18, 2016 MedGen:CN517202 not provided germline 22 50626154 TTGGCCTTCTGGCCAGGTCATATCGCTCCCGGTCAGTCCGCAGGCCCTCTCCTTGGAACCC 137852302 25510 NM_000032.4(ALAS2):c.871G>A (p.Gly291Ser) ALAS2 Sep 21, 2005 MedGen:C0221018,OMIM:300751,Orphanet:ORPHA98362,SNOMED CT:62677000 Hereditary sideroblastic anemia germline X 55017618 GACGCAGGCAACCATGCTTCCATGATCCAAGGTATCCGTAACAGTGGAGCAGCCAAGTTTG 863225260 214458 NM_005445.3(SMC3):c.1462G>A (p.Glu488Lys) SMC3 Apr 01, 2015 MedGen:C1853099,OMIM:610759 Cornelia de Lange syndrome 3 germline 10 110589944 GCAGAACAGCAAGCACTTGCTGCTAAAAGAGAAGATCTTGAAAAGAAGCAACAACTTCTTA -1 434187 NM_000527.4(LDLR):c.29G>A (p.Trp10Ter) LDLR - MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11089577 GCATGGGGCCCTGGGGCTGGAAATTGCGCTGGACCGTCGCCTTGCTCCTCGCCGCGGCGGG 121917995 79449 NM_006920.4(SCN1A):c.4874G>A (p.Arg1625Gln) SCN1A May 27, 2016 MedGen:C0393706,Orphanet:ORPHA1934;MedGen:C1853372,OMIM:606369;MedGen:C1858673,OMIM:604403;MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002 Early infantile epileptic encephalopathy;Epileptic encephalopathy Lennox-Gastaut type;Generalized epilepsy with febrile seizures plus, type 2;Severe myoclonic epilepsy in infancy germline;unknown 2 165992368 AAAAGTATTTCGTGTCCCCTACCCTGTTCCGAGTGATCCGTCTTGCTAGGATTGGCCGAAT 72558181 16247 NM_000429.2(MAT1A):c.791G>A (p.Arg264His) MAT1A Mar 30, 2015 MedGen:C0268621,OMIM:250850,Orphanet:ORPHA168598,SNOMED CT:57835009;MedGen:CN517202 Hepatic methionine adenosyltransferase deficiency;not provided germline 10 80275177 CTCTGCAGGGGGATGCGGGTGTCACTGGCCGTAAGATTATTGTGGACACCTATGGCGGCTG 121908670 21321 NM_002335.3(LRP5):c.724G>A (p.Ala242Thr) LRP5 Jul 27, 2016 MedGen:C1843330,OMIM:607634,Orphanet:ORPHA2783;MedGen:C1843323,OMIM:607636;MedGen:C0432273,OMIM:144750,Orphanet:ORPHA2790,SNOMED CT:254131007;MedGen:CN517202 Osteopetrosis autosomal dominant type 1;Van Buchem disease type 2;Worth disease;not provided germline 11 68363784 GTGGTGGAGGGCAGCCTGACGCACCCCTTCGCCCTGACGCTCTCCGGGGACACTCTGTACT 193302847 445491 NM_032520.4(GNPTG):c.318-1G>A GNPTG Nov 03, 2017 MedGen:CN517202 not provided germline 16 1362037 GGCCTCACGTGCCGTGCCCGTGTCTCCCCAGCATCTGGCACGAGTGGGAGATCGCCAACAA 121908690 21232 NM_001142548.1(RAD54L):c.973G>A (p.Gly325Arg) RAD54L Jun 03, 1999 MedGen:C1527349 Ductal breast carcinoma germline 1 46267540 TTGAACACCAGCCGGCGGGTGCTCATCTCCGGAACTCCCATCCAGAATGATCTGCTTGAGT 104894518 17923 NM_025193.3(HSD3B7):c.439G>A (p.Glu147Lys) HSD3B7 Aug 25, 2016 MedGen:C1843116,OMIM:607765,Orphanet:ORPHA79301 Bile acid synthesis defect, congenital, 1 germline 16 30986612 AGTCTTCCTTCTCCTCCCACCAGGGGCAACGAAGACACCCCATACGAAGCAGTGCACAGGC 587777356 132674 NM_178014.3(TUBB):c.1057G>A (p.Val353Ile) TUBB Dec 27, 2012 MedGen:C4014283,OMIM:615771 Cortical dysplasia, complex, with other brain malformations 6 germline 6 30724119 GAATGGATCCCCAACAATGTCAAGACAGCCGTCTGTGACATCCCACCTCGTGGCCTCAAGA 142637046 98272 NM_000048.3(ASL):c.446+1G>A ASL Jun 05, 2017 MedGen:C0268547,OMIM:207900,Orphanet:ORPHA23,SNOMED CT:41013004;MedGen:CN517202 Argininosuccinate lyase deficiency;not provided germline;unknown 7 66083175 CATTAGGACCATGGTGGATCGGGCAGAGGCGTGAGTCCTACAGGGACACCCAGGGGGCAGA 753851892 38799 NM_006208.2(ENPP1):c.795+1G>A ENPP1 Jan 13, 2012 MedGen:C1859727,OMIM:208000 Arterial calcification of infancy germline 6 131858748 ACTTTCCCCAATCACTACAGCATTGTCACCGTAAGCTCTGCATTTCAACTTCTATCTGTTT 797044886 205335 NM_005334.2(HCFC1):c.5860G>A (p.Gly1954Arg) HCFC1 Jul 18, 2013 MeSH:D030342,MedGen:C0950123 Inborn genetic diseases germline X 153950387 GCCCAGCTGGCCTTCATGCGGGTGTACTGCGGGCCCAGCCCCTCCTGCCTGGTGCAGTCCT 672601349 171699 NM_001845.5(COL4A1):c.2122G>A (p.Gly708Arg) COL4A1 Jan 01, 2009 MedGen:C1843512,OMIM:607595 Brain small vessel disease with hemorrhage germline 13 110181363 ACAGGTGTTGACGGCTTACCTGGAGACATGGGGCCACCGGGGACTCCAGGTCGCCCGGGAT 863224007 210663 NM_000143.3(FH):c.1189G>A (p.Gly397Arg) FH Jul 13, 2017 MedGen:C0342770,OMIM:606812,Orphanet:ORPHA24,SNOMED CT:237983002;Human Phenotype Ontology:HP:0007437,MedGen:C1708350,OMIM:150800,Orphanet:ORPHA523;MedGen:CN517202 Fumarase deficiency;Multiple cutaneous leiomyomas;not provided germline 1 241502490 GTCATGGGGAACCATGTTGCTGTCACTGTCGGAGGCAGCAATGGACATTTTGAGTTGAATG 398123768 100172 NM_003494.3(DYSF):c.1398-1G>A DYSF Nov 01, 2012 MedGen:C1850889,OMIM:253601,Orphanet:ORPHA268;MedGen:C1850808,OMIM:254130,Orphanet:ORPHA45448 Limb-girdle muscular dystrophy, type 2B;Miyoshi muscular dystrophy 1 germline 2 71539156 TGTTCAGGCCCTCTCTGCTCCCTTGCTCTAGGGACCGCCTGACTCACAATGACATCGTGGC 137853290 28136 NM_000326.4(RLBP1):c.452G>A (p.Arg151Gln) RLBP1 Jun 01, 2001 Human Phenotype Ontology:HP:0030642,MedGen:C0311338,OMIM:136880,Orphanet:ORPHA227796,SNOMED CT:68222009;MedGen:C1405854 Pigmentary retinal dystrophy;Retinitis punctata albescens germline 15 89215133 AAGCTGGCTACCCTGGTGTCCTCTCTAGTCGGGACAAGTATGGCCGAGTGGTCATGCTCTT 773598203 446020 NM_001005360.2(DNM2):c.1852G>A (p.Ala618Thr) DNM2 Mar 17, 2017 MedGen:CN517202 not provided germline 19 10823858 GACTCCCAGGAAGACGTGGACAGCTGGAAGGCCTCGTTCCTCCGAGCTGGCGTCTACCCCG 587779437 106869 NM_000090.3(COL3A1):c.2140G>A (p.Gly714Arg) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188999488 ACTTATTTTCAGGGTGCTGCTGGTCCTCCTGGGCCACCTGGTGCTGCTGGTACTCCTGGTC 515726149 131985 NM_181523.2(PIK3R1):c.1892G>A (p.Arg631Gln) PIK3R1 Apr 02, 2014 MedGen:C0878684,OMIM:269880 SHORT syndrome germline 5 68296248 AGAAGACATGGAATGTTGGAAGCAGCAACCGAAACAAAGCTGAAAACCTGTTGCGAGGGAA 201978571 176604 NM_016239.3(MYO15A):c.6046+1G>A MYO15A Oct 17, 2014 MedGen:CN043648,Orphanet:ORPHA87884 Nonsyndromic hearing loss and deafness germline 17 18143797 AGCTGGCTGGGCTCTTGCAAGCAGTGGCAGGTGGGTCAGCACCAGGCGGGGGGAGGGCCCA 80338851 16303 NM_194318.3(B3GLCT):c.660+1G>A B3GLCT Jun 14, 2016 MedGen:C0796012,OMIM:261540;MedGen:CN517202 Peters plus syndrome;not provided germline 13 31269278 TCCGACTTTACAATAGATTTAAAACATGAGGTATGTCATGTTTTGTTTGATTAAAAATCTT 75961395 22182 NM_000492.3(CFTR):c.254G>A (p.Gly85Glu) CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008;MedGen:CN517202 Cystic fibrosis;not provided de novo;germline;unknown 7 117509123 GATGTTTTTTCTGGAGATTTATGTTCTATGGAATCTTTTTATATTTAGGGGTAAGGATCTC -1 442161 NM_000435.2(NOTCH3):c.554G>A (p.Cys185Tyr) NOTCH3 Mar 29, 2017 MedGen:CN517202 not provided germline 19 15192085 TCAACACACCTGGCTCCTTCCGCTGCCAGTGTCCAGCTGGCTACACAGGGCCACTATGTGA 281864846 432850 NM_000517.4(HBA2):c.179G>A (p.Gly60Asp) HBA2 Apr 04, 2017 MedGen:CN517202 not provided germline 16 173208 GCCACGGCTCTGCCCAGGTTAAGGGCCACGGCAAGAAGGTGGCCGACGCGCTGACCAACGC 367658438 431651 NM_001029883.2(C2orf71):c.3002G>A (p.Trp1001Ter) C2orf71 Jan 01, 2015 Human Phenotype Ontology:HP:0000547,MeSH:D012174,MedGen:C0035334,OMIM:268000,Orphanet:ORPHA791,SNOMED CT:28835009 Retinitis pigmentosa unknown 2 29071260 GCAGAAAGGCCTCTCCCACGAGGACACACTGGGTGCCTCAAGCAGACAAGAGGCGCCGGAG 1085307266 414204 NM_001204.6(BMPR2):c.852+1G>A BMPR2 - MedGen:C0152171,OMIM:178600,SNOMED CT:26174007 Primary pulmonary hypertension germline 2 202519053 TATTTGCTTGTGATGGAGTACTATCCCAATGTAAGTTCTTCATAGAAAATAAACTGAGGCC 397514673 49907 NM_002241.4(KCNJ10):c.524G>A (p.Arg175Gln) KCNJ10 Aug 10, 2010 MedGen:C2748572,OMIM:612780,Orphanet:ORPHA199343 SeSAME syndrome germline 1 160042009 TCCTGGCGAAGATTGCCCGGCCCAAGAAGCGGGCTGAGACCATTCGTTTCAGCCAGCATGC -1 426847 NM_001171.5(ABCC6):c.3777G>A (p.Trp1259Ter) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16157768 GCTGCCCACATGTGCAGCTCAGCCCCCCTGGCCTCAGGGCGGGCAGATCGAGTTCCGGGAC 28936684 23370 NM_000388.3(CASR):c.680G>A (p.Arg227Gln) CASR Aug 09, 2017 MedGen:C0342345,OMIM:601198;MedGen:C1809471,OMIM:145980,Orphanet:ORPHA93372,SNOMED CT:190868007;MedGen:C1809471,OMIM:145980,Orphanet:ORPHA93372,SNOMED CT:190868007;MedGen:CN517202 Hypocalcemia, autosomal dominant 1;Hypocalciuric hypercalcemia, familial, type 1;Hypocalciuric hypercalcemia, familial, type 1;not provided germline 3 122261715 ACTATGGGCGGCCGGGGATTGAGAAATTCCGAGAGGAAGCTGAGGAAAGGGATATCTGCAT 547940069 21780 NM_175850.2(DNMT3B):c.2397-11G>A DNMT3B Oct 29, 1999 MedGen:C0398788,OMIM:242860,SNOMED CT:234633000 Centromeric instability of chromosomes 1,9 and 16 and immunodeficiency germline 20 32807751 GGCACTTCTGACTTGCTGTCTTTTCACTCCGGTACCCCCAGGATCTTTGGCTTTCCTGTGC 587783131 166514 NM_003159.2(CDKL5):c.99+5G>A CDKL5 Mar 13, 2014 MedGen:C1839333,OMIM:300672;MedGen:CN517202 Early infantile epileptic encephalopathy 2;not provided de novo;germline;unknown X 18510859 GAGTTGTACTTAAATGCAGACACAAGGCAAGTACATTATTTTTAAAAAGAAATATCTGTAT 104886082 35683 NM_000495.4(COL4A5):c.920G>A (p.Gly307Asp) COL4A5 Oct 31, 2017 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917;MedGen:CN517202 Alport syndrome, X-linked recessive;not provided germline X 108581011 AGGGTAAACCAGGCAAAGATGGAGAAAATGGCCAACCAGGAATTCCTGTAAGTAGCTAAGG 876660696 235758 NM_001042492.2(NF1):c.5991G>A (p.Trp1997Ter) NF1 Sep 16, 2015 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 17 31335016 GATGTACCCATCTATTCAAGCAAAAATATGGGGAAGCCTTGGGCAGGTATTGAGTTTGCTC 111033364 17396 NM_206933.2(USH2A):c.11864G>A (p.Trp3955Ter) USH2A Oct 27, 2016 Human Phenotype Ontology:HP:0008527,MedGen:C1865866;Human Phenotype Ontology:HP:0000365,MedGen:C0018772;Human Phenotype Ontology:HP:0000547,MeSH:D012174,MedGen:C0035334,OMIM:268000,Orphanet:ORPHA791,SNOMED CT:28835009;MedGen:C3151138,OMIM:613809;MedGen:C1848634,OMIM:276901;MedGen:CN517202 Congenital sensorineural hearing impairment;Hearing impairment;Retinitis pigmentosa;Retinitis pigmentosa 39;Usher syndrome, type 2A;not provided germline;unknown 1 215728232 GTAACTCCAAGGGTTCAGTGGAGAGTCTGTGGTCATTAACACAAACTCTGGAAGCTCCACC 80358212 20047 NM_153212.2(GJB4):c.65G>A (p.Arg22His) GJB4 Apr 01, 2003 MedGen:CN258420,OMIM:617524 Erythrokeratodermia variabilis et progressiva 2 germline 1 34761319 GCGTGAACAAGTACTCCACAGTGCTGAGCCGCATCTGGCTGTCTGTGGTGTTCATCTTTCG 119103275 17286 NM_000433.3(NCF2):c.230G>A (p.Arg77Gln) NCF2 Nov 01, 1999 MedGen:C1856245,OMIM:233710 Chronic granulomatous disease, autosomal recessive cytochrome b-positive, type 2 germline 1 183586922 ACAAGCACTTGGCAGTGGCTTACTTCCAACGAGGGATGCTCTACTACCAGACAGAGAAGTA 397507449 34610 NM_172107.3(KCNQ2):c.1118+1G>A KCNQ2 Mar 31, 2016 MedGen:C1852587,OMIM:121200 Benign familial neonatal seizures 1 germline 20 63433808 CGAGCGAACGGTCACCGTGCCCATGTACAGGTACCGCCGCCGGGCACCTGCCACCAAGCAA 200799769 48421 NM_001077416.2(TMEM231):c.784G>A (p.Asp262Asn) TMEM231 May 20, 2017 MedGen:C3554235,OMIM:614970;MedGen:C3554235,OMIM:614970;MedGen:C3809352,OMIM:615397;MedGen:CN517202 Joubert syndrome 20;Joubert syndrome 20;Meckel syndrome, type 11;not provided germline 16 75542641 AACGGGACCAGCCCCTTTGCCTATGACTACGACCTCACCCATATTGTTGCTGCCTACCAGG 727504494 174401 NM_000503.5(EYA1):c.428G>A (p.Trp143Ter) EYA1 Apr 08, 2013 MedGen:C0265234,OMIM:113650,Orphanet:ORPHA107,SNOMED CT:290006 Melnick-Fraser syndrome germline 8 71317680 AGCTATCACTAACTGATTTAGGTGCATTGTGGGCAGGCATCAAGACTGAAGGTGGATTGTC 28934592 27135 NM_000196.3(HSD11B2):c.623G>A (p.Arg208His) HSD11B2 Dec 01, 1997 MedGen:C2936861,OMIM:218030 Apparent mineralocorticoid excess germline 16 67436101 AGCTGACCAAGGGCCTCCTGCCCCTGCTGCGCAGCTCAAGGGGCCGCATCGTGACTGTGGG 587778797 76779 NM_000784.3(CYP27A1):c.446+1G>A CYP27A1 Aug 01, 2013 MedGen:C0238052,OMIM:213700,Orphanet:ORPHA909,SNOMED CT:63246000 Cholestanol storage disease not provided 2 218809768 GCACGACCTGACCTATGGGCCGTTCACCACGTGAGCTGGGGCCTGAAGGGACTGGAACAGG 80356860 46194 NM_007294.3(BRCA1):c.5117G>A (p.Gly1706Glu) BRCA1 Jul 24, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline 17 43063909 TGTGTGAACGGACACTGAAATATTTTCTAGGAATTGCGGGAGGAAAATGGGTAGTTAGCTA 587777213 108175 NM_001040436.2(YARS2):c.137G>A (p.Gly46Asp) YARS2 Mar 18, 2016 MedGen:C3150802,OMIM:613561;MedGen:CN517202 Myopathy, lactic acidosis, and sideroblastic anemia 2;not provided germline 12 32755738 AGGGGTTACTGGCAGCGCAGAAGGCTCGAGGTCTGTTCAAGGACTTCTTCCCGGAGACGGG -1 424466 NM_172079.2(CAMK2B):c.709G>A (p.Glu237Lys) CAMK2B Dec 08, 2017 Human Phenotype Ontology:HP:0001249,MedGen:C1843367;MedGen:CN679648,OMIM:617799 Intellectual disability;MENTAL RETARDATION, AUTOSOMAL DOMINANT 54 de novo;germline 7 44242328 CGCTGTTTCCTTCTGCAGTTCCCGTCCCCTGAGTGGGACACCGTCACTCCTGAAGCCAAAA 81002837 46710 NM_000059.3(BRCA2):c.8331+1G>A BRCA2 Oct 02, 2015 MedGen:C2675520,OMIM:612555;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 2;Hereditary cancer-predisposing syndrome;not provided germline 13 32363534 CTTGAAGCCCCAGAATCTCTTATGTTAAAGGTAAATTAATTTGCACTCTTGGTAAAAATCA 118192176 28015 NM_000540.2(RYR1):c.6502G>A (p.Val2168Met) RYR1 Nov 15, 2017 MedGen:CN031421,OMIM:145600;Human Phenotype Ontology:HP:0003789,MedGen:C1850674,OMIM:255320,Orphanet:ORPHA98905;MedGen:CN239331;MedGen:CN517202 Malignant hyperthermia, susceptibility to, 1;Minicore myopathy;RYR1-Related Disorders;not provided germline;maternal;unknown 19 38494579 TGCCTCGGCCAGATCCGCTCGCTGCTCATCGTGCAGATGGGCCCCCAGGAGGAGAACCTCA -1 463822 NM_000059.3(BRCA2):c.8909G>A (p.Trp2970Ter) BRCA2 Jun 06, 2017 MedGen:C0677776,Orphanet:ORPHA145 Hereditary breast and ovarian cancer syndrome germline 13 32379471 AAGGTTTATCAAGGGATGTCACAACCGTGTGGAAGTTGCGTATTGTAAGCTATTCAAAAAA 121908876 21489 NM_000369.2(TSHR):c.1514G>A (p.Ser505Asn) TSHR Nov 01, 1997 MedGen:C1836706,OMIM:609152,Orphanet:ORPHA424 Hyperthyroidism, nonautoimmune germline 14 81143572 ACACGGCTGGTTTCTTCACTGTCTTTGCAAGCGAGTTATCGGTGTATACGCTGACGGTCAT 727504537 176446 NM_001399.4(EDA):c.396+1G>A EDA Apr 11, 2013 Human Phenotype Ontology:HP:0007607,MedGen:C1706004,Orphanet:ORPHA238468 Hypohidrotic ectodermal dysplasia germline X 69616705 CTCCACTCTGACTCCCAGGACGGGCACCAGGTGAGTCACCTAGTAGGGGCGGCGGCGGCCC 267607071 19217 NM_014140.3(SMARCAL1):c.2291G>A (p.Arg764Gln) SMARCAL1 Oct 15, 2009 MedGen:C0877024,OMIM:242900,Orphanet:ORPHA1830 Schimke immunoosseous dysplasia germline 2 216475315 GCATCGATGGCTCCACCTCATCAGCTGAGCGGGAGGACCTGTGCCAGCAGTTCCAACTGTC 121918491 28307 NM_000141.4(FGFR2):c.1032G>A (p.Ala344=) FGFR2 Sep 17, 2016 Human Phenotype Ontology:HP:0001363,MedGen:C1849943;MedGen:C1867563;Human Phenotype Ontology:HP:0004439,MeSH:D003394,MedGen:C0010273,OMIM:123500,SNOMED CT:28861008;MedGen:C1867564 Craniosynostosis;Craniosynostosis, nonclassifiable autosomal dominant;Crouzon syndrome;Scaphocephaly and axenfeld-rieger anomaly germline 10 121517371 TGAGGACGCTGGGGAATATACGTGCTTGGCGGGTAATTCTATTGGGATATCCTTTCACTCT -1 481347 NM_017780.3(CHD7):c.2858G>A (p.Trp953Ter) CHD7 Sep 08, 2017 MedGen:C0265354,OMIM:214800,Orphanet:ORPHA138,SNOMED CT:47535005 CHARGE association germline 8 60822046 TGAAACAGGAGCGACCTCCTGCTGATGATTGGAAGAAATCGGAGAGTTCCAGGGAGTATAA 72656343 466991 NM_000088.3(COL1A1):c.3936G>A (p.Trp1312Ter) COL1A1 Apr 17, 2017 MedGen:C0023931,OMIM:166200,SNOMED CT:385482004 Osteogenesis imperfecta type I germline 17 50186386 CACTCAGCCCAGTGTGGCCCAGAAGAACTGGTACATCAGCAAGAACCCCAAGGACAAGAGG 121908351 19962 NM_022124.5(CDH23):c.4021G>A (p.Asp1341Asn) CDH23 May 31, 2016 MedGen:C1832394,OMIM:601386;MedGen:CN517202 Deafness, autosomal recessive 12;not provided germline 10 71732292 GAGATTGTGCGGGTCCAGGCCTACTCCATCGACAACCTCAACCAAATCACGTACCGCTTCA 869312885 226600 NM_006060.5(IKZF1):c.551G>A (p.Arg184Gln) IKZF1 Aug 25, 2016 MedGen:C4225173,OMIM:616873,Orphanet:ORPHA317473 Immunodeficiency, common variable, 13 germline 7 50382669 AATGCCACCTCTGCAACTACGCCTGCCGCCGGAGGGACGCCCTCACTGGCCACCTGAGGAC 794728194 197756 NM_000138.4(FBN1):c.2638G>A (p.Gly880Ser) FBN1 May 08, 2017 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:CN118826,Orphanet:ORPHA91387 Marfan syndrome;Thoracic aortic aneurysm and aortic dissection germline 15 48495162 ACCTTAAAGTCCCAGTGCTGCTCCTCCCTCGGTGCTGCGTGGGGAAGCCCGTGCACCCTAT 371848318 404649 NM_025077.3(TOE1):c.307G>A (p.Ala103Thr) TOE1 Apr 15, 2017 MedGen:C3554226,OMIM:614969,Orphanet:ORPHA284339 Pontocerebellar hypoplasia, type 7 germline 1 45341543 AGGACCCGTTCTATCCTTTCCCTGGGCCTCGCCTGCTTCAAGCGGCAGCCAGACAAGGTAT 28935497 25864 NM_004463.2(FGD1):c.1829G>A (p.Arg610Gln) FGD1 Mar 30, 2016 MedGen:C0175701,OMIM:305400,SNOMED CT:14921002;MedGen:CN517202 Aarskog syndrome;not provided germline X 54456233 TGTCAGCAAAGAATGGGACCACTCAAGACCGATACCTCATACTAGTAAGTGCCAGGCATGG 104886142 35796 NM_000495.4(COL4A5):c.1871G>A (p.Gly624Asp) COL4A5 May 11, 2017 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917;Human Phenotype Ontology:HP:0100820,MedGen:C0268731,Orphanet:ORPHA93548;Human Phenotype Ontology:HP:0000822,MedGen:C0497247;Human Phenotype Ontology:HP:0012595,MedGen:C4022832;MedGen:CN517202 Alport syndrome, X-linked recessive;Glomerulopathy;Hypertension;Mild proteinuria;not provided germline;inherited;unknown X 108598793 CAGGGAATATAGGGCCTATGGGTCCCCCTGGTTTCGGCCCTCCAGGCCCAGTAGGTGAAAA 587779637 107115 NM_000090.3(COL3A1):c.1249G>A (p.Gly417Arg) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188994288 CCTGGACTGATGGGAGCCCGGGGTCCTCCAGGACCAGCCGGTGCTAATGGTGCTCCTGGAC 137852665 24151 NM_002180.2(IGHMBP2):c.1540G>A (p.Glu514Lys) IGHMBP2 Sep 23, 2015 MedGen:C1858517,OMIM:604320,Orphanet:ORPHA98920;MedGen:C0043116,OMIM:253300,Orphanet:ORPHA83330,SNOMED CT:64383006;MedGen:CN517202 Spinal muscular atrophy, distal, autosomal recessive, 1;Werdnig-Hoffmann disease;not provided germline 11 68934466 TGCTCACCCGTTCTTTCTTTCCCTCCAGGCGAAGTCCGCCTCGTCAGTTTGCACATCCAGG 74315471 18113 NM_000487.5(ARSA):c.739G>A (p.Gly247Arg) ARSA Sep 08, 2017 MedGen:C0023522,OMIM:250100,Orphanet:ORPHA512,SNOMED CT:396338004;MedGen:C4017094 Metachromatic leukodystrophy;Metachromatic leukodystrophy, severe germline;maternal 22 50626706 GGGCAGAGCTTTGCAGAGCGTTCAGGCCGCGGGCCATTTGGGGACTCCCTGATGGAGCTGG 104886079 35677 NM_000495.4(COL4A5):c.884G>A (p.Gly295Asp) COL4A5 Feb 17, 2017 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917;MedGen:CN517202 Alport syndrome, X-linked recessive;not provided germline X 108580731 AAGGTGAGAAGGGTGAGCAAGGAGAGCCAGGCAAAAGAGTAAGTGATGTAACTGCTAATAT 113042313 376001 NM_000458.3(HNF1B):c.1108G>A (p.Gly370Ser) HNF1B Jun 01, 2015 MedGen:CN517202 not provided germline 17 37710601 ATCACTTCCTCCTCAACAATCAGTCACCATGGCAACAGCGCCATGGTGACCAGCCAGTCGG 863224964 213822 NM_000070.2(CAPN3):c.499-1G>A CAPN3 Aug 08, 2014 MedGen:C1869123,OMIM:253600,Orphanet:ORPHA267 Limb-girdle muscular dystrophy, type 2A germline 15 42387752 ATGTGACTCTGTGCGTGACGCTTCTGTGCAGTTCTGGCGCTATGGAGAGTGGGTGGACGTG 730880447 179875 NM_000169.2(GLA):c.548-1G>A GLA Jul 31, 2014 MedGen:CN517202 not provided germline X 101400758 CCCTTATTTTACCCATTGTTTTCTCATACAGGTTATAAGCACATGTCCTTGGCCCTGAATA 886041965 264508 NM_001845.5(COL4A1):c.2672G>A (p.Gly891Asp) COL4A1 Sep 09, 2016 MedGen:CN517202 not provided germline 13 110177886 TGGGCGTCATGGGGACCCCCGGGCAGCCGGGCTCACCAGGACCAGTGGGTGCTCCTGGATT 28934891 15165 NM_000071.2(CBS):c.1330G>A (p.Asp444Asn) CBS Jul 19, 2017 na;MedGen:C3150344,OMIM:236200;MedGen:CN068394;MedGen:CN517202 HYPERHOMOCYSTEINEMIA, THROMBOTIC, CBS-RELATED;Homocystinuria due to CBS deficiency;Homocystinuria, pyridoxine-responsive;not provided germline;unknown 21 43058862 ACCATCGAGATCCTCCGGGAGAAGGGCTTCGACCAGGCGCCCGTGGTGGATGAGGCGGGGT 387906700 38881 NM_000260.3(MYO7A):c.1184G>A (p.Arg395His) MYO7A Jun 01, 2010 MedGen:C1838701,OMIM:600060 Deafness, autosomal recessive 2 germline 11 77160266 CACTGAGCAGGGAACAGGCACTGGACGTGCGCGACGCCTTCGTAAAGGTGGGCTGGAGGGA 397507922 67030 NM_000059.3(BRCA2):c.7617+1G>A BRCA2 Jul 28, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline 13 32356610 CAAGTTCCCTCTGCGTGTTCTCATAAACAGGTATGTGTTTGTCTACAATACTGATGGCTTT 397508533 205620 NM_000492.3(CFTR):c.3294G>A (p.Trp1098Ter) CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline 7 117611735 CTGGTTCTTGTACCTGTCAACACTGCGCTGGTTCCAAATGAGAATAGAAATGATTTTTGTC 748944640 245551 NM_000527.4(LDLR):c.418G>A (p.Glu140Lys) LDLR Mar 30, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11105324 TCAGACCGGGACTGCTTGGACGGCTCAGACGAGGCCTCCTGCCCGGTGCTCACCTGTGGTC 397514475 39506 NM_176787.4(PIGN):c.2126G>A (p.Arg709Gln) PIGN Jun 01, 2011 MedGen:C3279775,OMIM:614080,Orphanet:ORPHA280633 Multiple congenital anomalies-hypotonia-seizures syndrome 1 germline 18 62095902 CACTACTGAGTTCTCCAGTTCTCTTTCAGCGATTGTTCAGCATACTTCTTTCATTGATGTC 137852431 25279 NM_000132.3(F8):c.1957G>A (p.Val653Met) F8 Feb 01, 1993 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154947854 AGTTTGCAGTTGTCAGTTTGTTTGCATGAGGTGGCATACTGGTACATTCTAAGCATTGGAG 104893659 28825 NM_013953.3(PAX8):c.170G>A (p.Cys57Tyr) PAX8 Jan 01, 2001 Human Phenotype Ontology:HP:0008188,MedGen:C1563716,OMIM:218700 Thyroid agenesis germline 2 113246775 TCTCTCGCCAGCTCCGCGTCAGCCATGGCTGCGTCAGCAAGATCCTTGGCAGGTAAGCACG 78532707 432426 NM_170726.2(ALDH4A1):c.866+1G>A ALDH4A1 Nov 17, 2014 MedGen:C2931835,OMIM:239510,Orphanet:ORPHA79101,SNOMED CT:124177001 Deficiency of pyrroline-5-carboxylate reductase maternal 1 18881699 CTGTGGCATCAACTTCACAGGCAGTGTGCCGTAAGTCCCTGGGGATGGTGTAGGCTGTGGT 199476141 24655 m.4332G>A MT-TQ Feb 13, 2001 MedGen:C0162671,OMIM:540000,Orphanet:ORPHA550,SNOMED CT:39925003 Juvenile myopathy, encephalopathy, lactic acidosis AND stroke germline MT 4332 ATAATAGGAGCTTAAACCCCCTTATTTCTAGGACTATGAGAATCGAACCCATCCCTGAGAA 121912631 20572 NM_014249.3(NR2E3):c.166G>A (p.Gly56Arg) NR2E3 Jul 22, 2016 MedGen:C1970163,OMIM:611131;MedGen:CN517202 Retinitis pigmentosa 37;not provided germline 15 71811530 CAGTGCCGCGTGTGCGGAGACAGCAGCAGCGGGAAGCACTATGGCATCTATGCCTGCAACG 281865077 20322 NM_000195.4(HPS1):c.398+5G>A HPS1 Oct 11, 2012 MedGen:C2931875,OMIM:203300 Hermansky-Pudlak syndrome 1 germline 10 98435267 GTGGACGGTCATCTTATCCGAAAGGAGTGAGTCTTCAAAGCTGGTCCCCTCTGTCCTTTGC 886039472 259867 NM_001101.4(ACTB):c.617G>A (p.Arg206Gln) ACTB Jun 16, 2016 MedGen:CN517202 not provided germline 7 5528466 GCGGCTACAGCTTCACCACCACGGCCGAGCGGGAAATCGTGCGTGACATTAAGGAGAAGCT 121909683 31245 NM_000821.6(GGCX):c.763G>A (p.Val255Met) GGCX Mar 01, 2009 MedGen:C1835813,OMIM:610842,Orphanet:ORPHA91135 Pseudoxanthoma elasticum-like disorder with multiple coagulation factor deficiency germline 2 85554269 TTGTCTGAGGAGCTGACTAGCCTGCTGGTCGTGCACTGGGGTGGGCTGCTGCTTGACCTCT 374718902 359576 NM_000094.3(COL7A1):c.5344G>A (p.Gly1782Arg) COL7A1 Nov 10, 2016 MedGen:CN517202 not provided germline 3 48579241 CGGGGTCCCCCTGGGCTGGATGGCCGGAGCGGACTGGATGGGAAACCAGGAGCCGCTGGGC 104894652 17957 NM_173477.4(USH1G):c.113G>A (p.Trp38Ter) USH1G Mar 01, 2005 MedGen:C1847089,OMIM:606943 Usher syndrome, type 1G germline 17 74922961 CCGACGAGGATGGCATGACCCCCACTCTCTGGGCTGCCTACCATGGCAACCTCGAGTCGCT 56144125 202586 NM_000391.3(TPP1):c.509-1G>A TPP1 May 18, 2017 MedGen:C0027877,OMIM:214200,Orphanet:ORPHA216,SNOMED CT:42012007;MedGen:CN517202 Neuronal ceroid lipofuscinosis;not provided germline 11 6617154 AGATCTCCTCAAGCCTGACTTCTCCCTACAGTGGGGGGACTGCACCGTTTTCCCCCAACAT 137852959 19587 NM_153638.3(PANK2):c.1561G>A (p.Gly521Arg) PANK2 Jun 16, 2017 MedGen:C1846582,OMIM:607236;MeSH:D030342,MedGen:C0950123;MedGen:C2751506;MedGen:C0018523,OMIM:234200,Orphanet:ORPHA157850,SNOMED CT:2992000;MedGen:CN517202 Hypoprebetalipoproteinemia, acanthocytosis, retinitis pigmentosa, and pallidal degeneration;Inborn genetic diseases;Neurodegeneration with brain iron accumulation 1, atypical;Pigmentary pallidal degeneration;not provided biparental;germline;inherited;maternal 20 3918695 GCTCAGAACATTAACCAGGTGGTATTTGTTGGAAATTTCTTGAGAATTAATACGATCGCCA 111033704 36517 NM_000155.3(GALT):c.462G>A (p.Trp154Ter) GALT Dec 04, 2012 MedGen:C0268151,OMIM:230400,Orphanet:ORPHA79239,SNOMED CT:124354006 Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase not provided 9 34647916 CCCTGAGATCCGGGCTGTTGTTGATGCATGGGCCTCAGTCACAGAGGAGCTGGGTGCCCAG 61754365 105464 NM_000372.4(TYR):c.650G>A (p.Arg217Gln) TYR May 15, 2015 MedGen:C0268494,OMIM:203100,Orphanet:ORPHA79431,SNOMED CT:6483008;MedGen:CN517202 Tyrosinase-negative oculocutaneous albinism;not provided germline 11 89178603 TTCTGCCTTGGCATAGACTCTTCTTGTTGCGGTGGGAACAAGAAATCCAGAAGCTGACAGG 1057519492 362180 NM_001033053.2(NLRP1):c.160G>A (p.Ala54Thr) NLRP1 Feb 01, 2017 Gene:107988031,MedGen:C3808876,OMIM:615225,OMIM:616964 Palmoplantar carcinoma, multiple self-healing germline 17 5583798 CAGCCAGAGAAGACGAGTGGCATGGAGGTGGCCTCGTACCTGGTGGCTCAGTATGGGGAGC 387907243 45579 NM_001382.3(DPAGT1):c.349G>A (p.Val117Ile) DPAGT1 Nov 08, 2012 MedGen:C3553645,OMIM:614750 Congenital myasthenic syndrome 13 germline 11 119100777 TGCATGATCTTCCTGGGCTTTGCGGATGATGTACTGAATCTGCGCTGGCGCCATAAGCTGC 397514724 75091 NM_080605.3(B3GALT6):c.649G>A (p.Gly217Ser) B3GALT6 Jun 06, 2013 MedGen:C4017378 Spondyloepimetaphyseal dysplasia with joint laxity, type 1, with fractures germline 1 1232927 GACTACTACCTGCCCTACGCGCTGGGCGGCGGCTACGTGCTCTCGGCCGACCTGGTGCACT 119103246 17371 NM_033071.3(SYNE1):c.24071G>A (p.Arg8024His) SYNE1 Dec 01, 2007 MedGen:C2751807,OMIM:612998 Emery-Dreifuss muscular dystrophy 4, autosomal dominant germline 6 152151987 GCAACCAGAGATGGGACAACCTGCAAAAGCGTGTCACCTCCATCTTGCGCAGACTCAAGGT 886039664 260263 NM_006941.3(SOX10):c.425G>A (p.Trp142Ter) SOX10 Jun 10, 2016 MedGen:CN517202 not provided germline 22 37983360 CTGAGCTCAGCAAGACGCTGGGCAAGCTCTGGAGGTGAGCACCCGACCGCCCCCCGGGCTC 150346282 177307 NM_000033.3(ABCD1):c.1825G>A (p.Glu609Lys) ABCD1 Jul 11, 2017 MedGen:C0162309,OMIM:300100,Orphanet:ORPHA43,SNOMED CT:65389002 Adrenoleukodystrophy germline X 153743031 TGTGACTGGAAGGACGTCCTGTCGGGTGGCGAGAAGCAGAGAATCGGCATGGCCCGCATGT 81002849 66468 NM_000059.3(BRCA2):c.517-1G>A BRCA2 Oct 02, 2015 MedGen:C2675520,OMIM:612555;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 2;Hereditary cancer-predisposing syndrome germline 13 32326498 ATAAAAAATAAACTATTTTCTTTCCTCCCAGGGTCGTCAGACACCAAAACATATTTCTGAA 587777669 153824 NM_031372.3(HNRNPDL):c.1132G>A (p.Asp378Asn) HNRNPDL Aug 01, 2014 Gene:553991,MedGen:C1836765,OMIM:609115,Orphanet:ORPHA55596 Limb-girdle muscular dystrophy, type 1G germline 4 82426523 GATCAAAACTATAGTGGCTATGGCGGATATGATTATACTGGGTATAACTATGGGAACTATG 104894213 21823 NM_001360.2(DHCR7):c.453G>A (p.Trp151Ter) DHCR7 Apr 01, 2008 MedGen:C0175694,OMIM:270400,Orphanet:ORPHA818,SNOMED CT:43929004 Smith-Lemli-Opitz syndrome germline 11 71441400 CAAGTATCAGATCAATGGCCTGCAAGCCTGGCTCCTCACGCACCTGCTCTGGTTTGCAAAC 387907054 39877 NM_152722.4(HEPACAM):c.266G>A (p.Gly89Asp) HEPACAM Apr 08, 2011 MedGen:C4017257 Megalencephalic leukoencephalopathy with subcortical cysts 2b, remitting, with mental retardation germline 11 124924889 TGGTGCAGTCCATTGGCACAGAGGTCATCGGCACCCTGCGGCCTGACTATCGAGACCGTAT 796052888 202959 NM_002693.2(POLG):c.2558G>A (p.Arg853Gln) POLG Sep 01, 2016 MedGen:CN517202 not provided germline 15 89321776 AAGTGGTGACTGCCGGCACCATCACTCGCCGGGCTGTGGAGCCCACATGGCTCACCGCCAG 869312698 225866 NM_001131005.2(MEF2C):c.71G>A (p.Arg24Lys) MEF2C Aug 07, 2015 MedGen:C3150700,OMIM:613443,Orphanet:ORPHA228384 Mental retardation, stereotypic movements, epilepsy, and/or cerebral malformations de novo 5 88804785 TTTCTTTTTTCTAGGTGACATTTACAAAGAGGAAATTTGGGTTGATGAAGAAGGCTTATGA 796053129 201361 NM_021007.2(SCN2A):c.3944G>A (p.Arg1315Lys) SCN2A Oct 23, 2013 MedGen:CN517202 not provided germline 2 165373319 TCAGAACACTAAGAGCTCTGAGGCCACTGAGAGCTTTGTCCCGGTTTGAAGGAATGAGGGT 398122362 94419 NM_052813.4(CARD9):c.214G>A (p.Gly72Ser) CARD9 Mar 28, 2013 MedGen:C1859353,OMIM:212050,Orphanet:ORPHA457088 Candidiasis, familial, 2 germline 9 136371432 GGTGTGCTCCTGGACATCCTGCAGCGGACCGGCCACAAGGGCTACGTGGCCTTCCTCGAGA 767361165 445137 NM_194318.3(B3GLCT):c.459+1G>A B3GLCT Dec 02, 2015 MedGen:CN517202 not provided germline 13 31247967 GAAACCCTCAGAAGATATGACCCCTCTAAGGTGAATATAACTTCAATACCAGTTCTTATTT 797045125 40329 NM_005850.4(SF3B4):c.913+1G>A SF3B4 Sep 07, 2012 Gene:171,MedGen:C0265245,OMIM:154400,SNOMED CT:35520007 Nager syndrome germline;unknown 1 149925835 CATTCCCACCGGGTGGGATGCCCCATCCAGGTAGGTGTGCTTTGTTGGGAAAGGGAGGGAA 144574243 360242 NM_033419.4(PGAP3):c.694+1G>A PGAP3 Nov 25, 2016 MedGen:CN517202 not provided germline 17 39673513 GCTACAACCTGGTGGCCAACGTGGCTATTGGTGAGGCCCTGGGGGGCTTGGGCCATCTGCA 139617644 187118 NM_006019.3(TCIRG1):c.1674-1G>A TCIRG1 Jan 15, 2015 MedGen:C1850127,OMIM:259700 Osteopetrosis autosomal recessive 1 germline 11 68049080 CCAGTGAGCACACCTCCCTCTTGCCCGCCAGGCACTTTGGCCAGAGGCACCGGCTGCTGCT 121908551 20948 NM_000334.4(SCN4A):c.3877G>A (p.Val1293Ile) SCN4A May 04, 2016 MedGen:C1868617,OMIM:168300;na;MedGen:CN517202 Paramyotonia congenita of von Eulenburg;SCN4A-related disorder;not provided germline;unknown 17 63944708 TCCTTCTTCACCCTCAACCTCTTCATTGGCGTCATCATTGACAACTTCAACCAGCAGAAGA 869312685 225849 NM_001168272.1(ITPR1):c.7739G>A (p.Gly2580Glu) ITPR1 Mar 10, 2015 MedGen:C1847725,OMIM:606658,Orphanet:ORPHA98769 Spinocerebellar ataxia 15 de novo 3 4815135 TCATCATCATTGTTCTTAACCTGATTTTTGGGGTTATCATTGACACTTTTGCTGACCTGAG 121912920 32260 NM_000090.3(COL3A1):c.2410G>A (p.Gly804Ser) COL3A1 Sep 01, 1994 na EHLERS-DANLOS SYNDROME, NONVASCULAR VARIANT germline 2 189002316 TTTTCTCTTCAGGGTGAGAGAGGTGAAACTGGCCCTCCAGGACCTGCTGGTTTCCCTGGTG 587783050 166264 NM_004360.4(CDH1):c.1137G>A (p.Thr379=) CDH1 Jul 13, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1708349,OMIM:137215,Orphanet:ORPHA26106;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Hereditary diffuse gastric cancer;not provided germline;unknown 16 68812263 CGATAATCCTCCGATCTTCAATCCCACCACGGTAATTCTATAACTCCTTAGAGGGTTTCCA 72554327 103028 NM_000531.5(OTC):c.217-1G>A OTC - MedGen:CN517202 not provided unknown X 38369795 TTTTAATTCTATTCTTGTCCTTGATTTATAGTATTTGCCTTTATTGCAAGGGAAGTCCTTA 794726765 365652 NM_001165963.1(SCN1A):c.1170+1G>A SCN1A Aug 17, 2017 MedGen:CN517202 not provided germline 2 166047626 CAGGACTTCTGGGAAAATCTTTATCAACTGGTGAGAACTAAAGAGCCACACTCTCCATTTA 33991059 433088 NM_000518.4(HBB):c.113G>A (p.Trp38Ter) HBB Jan 24, 2017 MedGen:CN169374 not specified germline 11 5226779 CCACCCTTAGGCTGCTGGTGGTCTACCCTTGGACCCAGAGGTTCTTTGAGTCCTTTGGGGA 797044847 204477 NM_004862.3(LITAF):c.385G>A (p.Ala129Thr) LITAF Dec 18, 2014 MedGen:C0270913,OMIM:601098,Orphanet:ORPHA101083,SNOMED CT:4183003 Charcot-Marie-Tooth disease, type 1C germline 16 11549738 CGTGTGTCTCTCTCTCCTCCCAGGTGCATAGCGGGCTGCTGCTTCATCCCCTTCTGCGTGG 77804083 24212 NM_000344.3(SMN1):c.305G>A (p.Trp102Ter) SMN1 Feb 01, 2001 MedGen:C0152109,OMIM:253400,Orphanet:ORPHA83419,SNOMED CT:54280009;MedGen:C0393538,OMIM:253550,Orphanet:ORPHA83418,SNOMED CT:128212001 Kugelberg-Welander disease;Spinal muscular atrophy, type II germline 5 70942389 GGAAAGTTGGGGACAAATGTTCTGCCATTTGGTCAGAAGACGGTTGCATTTACCCAGCTAC 121918239 16473 NM_001177317.1(SLC34A3):c.756G>A (p.Gln252=) SLC34A3 Oct 01, 2006 MedGen:C0342645,OMIM:241530,SNOMED CT:237891005 Autosomal recessive hypophosphatemic bone disease germline 9 137233404 GACGAAGCCGCTCACACACCTCATCGTGCAGGTGAGGACGGCCACCGCCCCCGCCCAGAGA 121912932 32228 NM_000093.4(COL5A1):c.4466G>A (p.Gly1489Glu) COL5A1 Aug 14, 2000 MedGen:C0268335,OMIM:130000,Orphanet:ORPHA287,SNOMED CT:20766005,SNOMED CT:83470009 Ehlers-Danlos syndrome, classic type germline 9 134820135 TTTTCCCACAGGGTCATCCAGGCCTGATCGGGCTCATCGGTCCTCCGGGTGAACAGGGTGA 74315365 28044 NM_021133.3(RNASEL):c.3G>A (p.Met1Ile) RNASEL Feb 01, 2002 MedGen:C2931456,OMIM:601518,Orphanet:ORPHA1331 Prostate cancer, hereditary, 1 germline 1 182586804 AAAGTGGTAGCAGGTGGCATTTACCGTCATGGAGAGCAGGGATCATAACAACCCCCAGGAG 879255145 246524 NM_000527.4(LDLR):c.2132G>A (p.Cys711Tyr) LDLR Nov 05, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline;unknown 19 11120514 GCATGCTGCTGGCCAGGGACATGAGGAGCTGCCTCACAGGTGTGGCACACGCCTTGTTTCT 1057520032 453713 NM_000222.2(KIT):c.1670G>A (p.Trp557Ter) KIT May 08, 2017 Human Phenotype Ontology:HP:0100723,MeSH:D046152,MedGen:C0238198,OMIM:606764,Orphanet:ORPHA44890 Gastrointestinal stroma tumor germline 4 54727438 CCCCACAGAAACCCATGTATGAAGTACAGTGGAAGGTTGTTGAGGAGATAAATGGAAACAA 121909797 22792 NM_001017535.1(VDR):c.137G>A (p.Gly46Asp) VDR Jul 01, 1996 MedGen:C0268690,OMIM:277440,SNOMED CT:72831007 Vitamin D-dependent rickets, type 2 germline 12 47878977 TCAATGCTATGACCTGTGAAGGCTGCAAAGGCTTCTTCAGGTGAGCCCTCCTCCCAGGCTC 879254471 245486 NM_000527.4(LDLR):c.314-1G>A LDLR Mar 25, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline;not applicable 19 11105219 GATGGTGGTCTCGGCCCATCCATCCCTGCAGCCCCCAAGACGTGCTCCCAGGACGAGTTTC 121434228 18457 NM_006147.3(IRF6):c.1137G>A (p.Trp379Ter) IRF6 Oct 01, 2003 MedGen:C0175697,OMIM:119300,SNOMED CT:79261008 Van der Woude syndrome germline 1 209789709 TGAGATCTACTTATGCTTTGGGGAAGAATGGCCAGATGGGAAACCATTGGAAAGGAAACTC 154774634 39557 NM_017882.2(CLN6):c.308G>A (p.Arg103Gln) CLN6 May 13, 2011 MedGen:C0022797,OMIM:204300,SNOMED CT:62009002;MedGen:CN517202 Adult neuronal ceroid lipofuscinosis;not provided germline 15 68211853 AACCCCACTCTGAACCCCAGCTCATCGAGCGGTCCCCCCGCACCCTGCCACGCTCCATCAC 386833744 203265 NM_001042432.1(CLN3):c.988G>A (p.Val330Ile) CLN3 Jan 01, 2015 Human Phenotype Ontology:HP:0000547,MeSH:D012174,MedGen:C0035334,OMIM:268000,Orphanet:ORPHA791,SNOMED CT:28835009;MedGen:CN517202 Retinitis pigmentosa;not provided germline;unknown 16 28482173 CTCAGGTACCAGATGCTGTACCAGGCTGGCGTCTTTGCCTCCCGCTCTTCTCTCCGCTGCT 780265931 419011 NM_025139.5(ARMC9):c.1474G>A (p.Gly492Arg) ARMC9 Aug 16, 2017 MedGen:CN262509;MedGen:CN399089,OMIM:617622 ARMC9-related Joubert syndrome;JOUBERT SYNDROME 30 germline;maternal 2 231276775 TTGCTCATGAACCTCTGCCTCCGCAGCACAGGTCTCAGCCCCGACCCTCATTCTAGTGCAA 113994125 15736 NM_001145320.1(ADAMTSL2):c.2586G>A (p.Trp862Ter) ADAMTSL2 Apr 19, 2012 MedGen:C3278147,OMIM:231050,SNOMED CT:28557005 Geleophysic dysplasia 1 germline 9 133570501 GCCCTGCTTCAAGTGGTACACCAGCCCCTGGTCAGAGGTGAGCTCCCAGCCGGCCCCTCTG 111033283 52497 NM_000260.3(MYO7A):c.640G>A (p.Gly214Arg) MYO7A May 18, 2017 MedGen:C1832475,OMIM:601317;MedGen:C1838701,OMIM:600060;MedGen:C1568247,OMIM:276900,Orphanet:ORPHA231169;MedGen:C1568247,OMIM:276900,Orphanet:ORPHA231169 Deafness, autosomal dominant 11;Deafness, autosomal recessive 2;Usher syndrome, type 1;Usher syndrome, type 1 germline;unknown 11 77156909 ACCATCCGCAATGACAACTCAAGCCGTTTCGGAAAGTACATCGACATCCACTTCAACAAGC 587779422 106853 NM_000090.3(COL3A1):c.951+5G>A (p.Gly300_Ala317del) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188991727 GACGGCCAGGACTTCCTGGGGCTGCAGTGAGTATAGCTGCTAACATCACACAATTACAACC 572314014 247699 NM_014321.3(ORC6):c.449+5G>A ORC6 Aug 26, 2016 MedGen:C3151113,OMIM:613803 Meier-Gorlin syndrome 3 germline 16 46693187 TCTGCTGCACTGCTTTCAGCATGCAAGTAGGTATTTCATTAAACATTCAGAAAAGTTACCA 143853590 39101 NM_005921.1(MAP3K1):c.1846G>A (p.Gly616Arg) MAP3K1 Dec 10, 2010 MedGen:C3151064,OMIM:613762 46,XY sex reversal, type 6 germline 5 56875191 TCTGGGGGCAGCAGTGGAAGCAGCCCGAGTGGGGGAGCCACCAGTGGGTCTTCCCAGACCA 587777688 165473 NM_005726.5(TSFM):c.944G>A (p.Cys315Tyr) TSFM Sep 30, 2016 MedGen:C1864840,OMIM:610505,Orphanet:ORPHA168566;MedGen:CN517202 Combined oxidative phosphorylation deficiency 3;not provided germline 12 57796549 TGTCGGTAGTAGACTTTGTGCGGTTTGAATGTGGAGAAGGTGAAGAGGCAGCAGAAACTGA 63750206 95466 NM_000249.3(MLH1):c.199G>A (p.Gly67Arg) MLH1 Jun 23, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0009405,Orphanet:ORPHA443090;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Hereditary nonpolyposis colon cancer;Lynch syndrome;not provided germline;unknown 3 36996701 AAGTTGATTCAGATCCAAGACAATGGCACCGGGATCAGGGTAAGTAAAACCTCAAAGTAGC 886039648 259702 NM_021007.2(SCN2A):c.4308+1G>A SCN2A Jun 02, 2016 MedGen:CN517202 not provided germline 2 165377651 ATTATGTATGCAGCTGTTGATTCACGAAATGTAAGTCTAGTTAGAGGGAAATTGTTTAGTT 267607216 17797 NM_014319.4(LEMD3):c.2564G>A (p.Trp855Ter) LEMD3 Jun 01, 2009 MedGen:C0265514,OMIM:166700,Orphanet:ORPHA1306,SNOMED CT:60399005 Dermatofibrosis lenticularis disseminata germline 12 65245931 GAAAGGCTTTTAAAGCATTGCATGGCTCTTGGTTTGATGGTAAGAAATTTGAGTACTACAA 121918149 15704 NM_000312.3(PROC):c.226G>A (p.Val76Met) PROC Mar 15, 1992 MedGen:C2676759,OMIM:612304 Thrombophilia, hereditary, due to protein C deficiency, autosomal recessive germline 2 127421438 TTCGAGGAGGCCAAGGAAATTTTCCAAAATGTGGATGACACAGTAAGGCCACCATGGGTCC 281874714 35963 NM_000495.4(COL4A5):c.3373+1G>A COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108655458 AAGGACAACCAGGCCTTCCTGGATTCCCAGGTAAAATTTCTTCTCTTAAATGCTTCCTTCT 121918719 27520 NM_000359.2(TGM1):c.428G>A (p.Arg143His) TGM1 Nov 01, 2006 MedGen:C3536797,OMIM:242300 Autosomal recessive congenital ichthyosis 1 germline 14 24261775 AGTATGAGTACGACGAGCTGATAGTGCGCCGCGGGCAGCCTTTCCATATGCTCCTCCTCCT -1 440661 NM_000092.4(COL4A4):c.2110G>A (p.Gly704Arg) COL4A4 Aug 31, 2016 MedGen:CN517202 not provided germline 2 227060190 CAAGGTGCCCCTGGGCTGAGTGGTTCAGATGGGCATAAAGGCAGACCTGGCACACCAGGAA 121907967 18955 NM_000520.5(HEXA):c.987G>A (p.Trp329Ter) HEXA Apr 01, 1992 MedGen:C2749283 Gm2-gangliosidosis, variant b1 germline 15 72348134 GATTAATCTTCATTTTCTCTTGGGATTCAGGAAGTCCAACCCAGAGATCCAGGACTTTATG 121908554 20954 NM_000334.4(SCN4A):c.4367G>A (p.Gly1456Glu) SCN4A Apr 01, 2000 MedGen:C1868617,OMIM:168300 Paramyotonia congenita of von Eulenburg germline 17 63941915 TGTTCCGTGTGATCCGCCTGGCGCGGATTGGGCGTGTCCTGCGGCTGATCCGCGGGGCCAA 9332961 450863 NM_000348.3(SRD5A2):c.607G>A (p.Gly203Ser) SRD5A2 Apr 23, 2017 MedGen:C0268297,OMIM:264600,Orphanet:ORPHA753,SNOMED CT:57514000 3-Oxo-5 alpha-steroid delta 4-dehydrogenase deficiency germline 2 31529398 AATTTCCTCGGTGAGATCATTGAATGGATCGGCTATGCCCTGGCCACTTGGTCCCTCCCAG 879254760 245930 NM_000527.4(LDLR):c.1028G>A (p.Gly343Asp) LDLR Mar 30, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11110739 AGATCGGCTACGAGTGCCTGTGCCCCGACGGCTTCCAGCTGGTGGCCCAGCGAAGATGCGA 397507891 241702 NM_000059.3(BRCA2):c.7007+1G>A BRCA2 Dec 06, 2015 MedGen:C0677776,Orphanet:ORPHA145 Hereditary breast and ovarian cancer syndrome germline 13 32346897 TTTAGAGCCGATTACCTGTGTACCCTTTCGGTAAGACATGTTTAAATTTTTCTAAATTCTA 72657692 426902 NM_001171.5(ABCC6):c.2974G>A (p.Gly992Arg) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16169667 ACGCAGGCAGCCCTGCGTGGCGGGATCTTCGGGCTCCTCGGCTGTCTCCAAGGTACGCCTC 199422291 47730 NM_198253.2(TERT):c.430G>A (p.Val144Met) TERT Mar 18, 2016 MedGen:C1800706,OMIM:178500,Orphanet:ORPHA79126,SNOMED CT:28168000;MedGen:CN517202 Idiopathic fibrosing alveolitis, chronic form;not provided germline 5 1294456 AGCGGGGCGTGGGGGCTGCTGCTGCGCCGCGTGGGCGACGACGTGCTGGTTCACCTGCTGG 62642939 98657 NM_000277.2(PAH):c.890G>A (p.Arg297His) PAH Aug 11, 2017 Human Phenotype Ontology:HP:0004923,MedGen:C0751435;MedGen:C0031485,OMIM:261600,Orphanet:ORPHA716,SNOMED CT:154735006;MedGen:CN517202 Hyperphenylalaninemia, non-pku;Phenylketonuria;not provided germline;unknown 12 102851709 TGTTGGGACATGTGCCCTTGTTTTCAGATCGCAGCTTTGCCCAGTTTTCCCAGGTAAGGAA 758439420 259254 NM_000400.3(ERCC2):c.2048G>A (p.Arg683Gln) ERCC2 Sep 26, 2016 MedGen:C0268138,OMIM:278730,SNOMED CT:68637004 Xeroderma pigmentosum, group D germline 19 45352351 CTGTCCCTGGCCTGCGCTTCTGCCCACAGCGGTTTGCCCGTGGGGACAAGCGGGGGAAGCT 149712244 169780 NM_003560.3(PLA2G6):c.1799G>A (p.Arg600Gln) PLA2G6 Nov 15, 2017 Human Phenotype Ontology:HP:0012675,MedGen:C4021076;MedGen:C1857747,OMIM:610217;MedGen:CN517202 Iron accumulation in brain;Neurodegeneration with brain iron accumulation 2b;not provided germline;inherited 22 38116155 ACCGGCAGCCGGCTGAACTCCACCTCTTCCGGAACTACGATGCTCCAGAAACTGTCCGGGA 797044558 205055 NM_004299.5(ABCB7):c.2047G>A (p.Gly683Ser) ABCB7 - MedGen:CN232400 Spinocerebellar ataxia, X-linked maternal X 75053585 CTCCGTGTTTCTCATGTGTTTACTTTTTAGGGTAAGGTAGCCGAACGTGGTACCCACCATG 61749397 15329 NM_000552.4(VWF):c.3946G>A (p.Val1316Met) VWF Oct 13, 2016 MedGen:CN517202;MedGen:CN169374;MedGen:C1282971,Orphanet:ORPHA166087 not provided;not specified;von Willebrand disease, type 2b germline 12 6019472 CGGCTGCGCATCTCCCAGAAGTGGGTCCGCGTGGCCGTGGTGGAGTACCACGACGGCTCCC 121909218 22851 NM_000314.6(PTEN):c.386G>A (p.Gly129Glu) PTEN Mar 01, 2017 MedGen:CN072330,OMIM:158350;MedGen:C1959582,OMIM:601728,Orphanet:ORPHA306498;MedGen:CN517202 Cowden syndrome 1;PTEN hamartoma tumor syndrome;not provided de novo;germline;maternal 10 87933145 TTGCAGCAATTCACTGTAAAGCTGGAAAGGGACGAACTGGTGTAATGATATGTGCATATTT 1131690974 420477 NM_000264.4(PTCH1):c.1379G>A (p.Trp460Ter) PTCH1 Nov 06, 2014 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 9 95477671 TCGCCTATGCCTGTCTAACCATGCTGCGCTGGGACTGCTCCAAGTCCCAGGGTGCCGTGGG 104886153 35811 NM_000495.4(COL4A5):c.1997G>A (p.Gly666Asp) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108601441 GTCAGACTATAACCCAGCCGGGGAAGCCTGGCTTGCCTGGTAACCCAGGCAGAGATGGTGA 587776739 25819 NM_003916.4(AP1S2):c.288+5G>A AP1S2 Nov 01, 2007 MedGen:C0796254,OMIM:304340,Orphanet:ORPHA1568 Pettigrew syndrome germline X 15845898 AATTACTTGACAAGTATTTCGGCAGTGTGAGTAGTATTTTATTTTAGGAAATTGAATGCCA 794728170 197794 NM_000138.4(FBN1):c.1583G>A (p.Cys528Tyr) FBN1 Jun 24, 2014 MedGen:CN517202 not provided germline 15 48513554 GATATCAGAGCACACTCACGCGGACAGAATGCCGAGGTATGGTCCTGGCTCCTGACGTGGA 886044450 274662 NM_001128834.2(PLP1):c.453G>A (p.Lys151=) PLP1 Sep 06, 2016 Human Phenotype Ontology:HP:0003269,MedGen:C0205711,OMIM:312080,Orphanet:ORPHA702,SNOMED CT:64855000 Pelizaeus-Merzbacher disease germline X 103786726 TTTGGGAAAATGGCTAGGACATCCCGACAAGGTGATCATCCTCAGGATTTTGTGGCAATAA 81002882 67377 NM_000059.3(BRCA2):c.8953+1G>A BRCA2 Jun 06, 2016 MedGen:C2675520,OMIM:612555;MedGen:CN517202 Breast-ovarian cancer, familial 2;not provided germline 13 32379516 TAAGCTATTCAAAAAAAGAAAAAGATTCAGGTAAGTATGTAAATGCTTTGTTTTTATCAGT 281865277 105675 NM_004183.3(BEST1):c.934G>A (p.Asp312Asn) BEST1 Aug 19, 2016 MedGen:CN517202 not provided germline 11 61959564 GATGATGATTTTGAGACCAACTGGATTGTCGACAGGAATTTGCAGGTATGGGGAGAGGGAG 886042902 268797 NM_001848.2(COL6A1):c.930+1G>A COL6A1 Dec 01, 2015 MedGen:CN029274,OMIM:158810;MedGen:CN033863,OMIM:254090 Bethlem myopathy 1;Ullrich congenital muscular dystrophy 1 germline 21 45989779 TAGGGAGAAAAAGGGAGCCGTGGGGAGAAGGTGAGTGAGGCTCGACCTCGGAGCTGGTCTC 121907948 18985 NM_000062.2(SERPING1):c.1397G>A (p.Arg466His) SERPING1 Jan 24, 2017 MedGen:C1862892,Orphanet:ORPHA100051,SNOMED CT:234620006;MedGen:CN517202 Hereditary C1 esterase inhibitor deficiency - dysfunctional factor;not provided germline 11 57614475 CGGCTGCAGCCTCCGCCATCTCTGTGGCCCGCACCCTGCTGGTCTTTGAAGTGCAGCAGCC 200724875 98179 NM_000016.5(ACADM):c.617G>A (p.Arg206His) ACADM Oct 04, 2016 MedGen:C0220710,OMIM:201450,Orphanet:ORPHA42,SNOMED CT:128596003 Medium-chain acyl-coenzyme A dehydrogenase deficiency germline 1 75745823 GTGTATCTCTTAGGTATTTTTTATTGGCACGTTCTGATCCAGATCCTAAAGCTCCTGCTAA 80338850 16304 NM_194318.3(B3GLCT):c.347+5G>A B3GLCT Feb 17, 2011 MedGen:C0796012,OMIM:261540 Peters plus syndrome germline 13 31247104 TGGACCATACTTCCGTTGTTACCGCAGTACGTTTGTTTAACTCACCTGTGAATTACTGACA 587777829 27184 NM_024649.4(BBS1):c.432+1G>A BBS1 Sep 09, 2016 MedGen:C0752166,OMIM:209900,Orphanet:ORPHA110,SNOMED CT:5619004;MedGen:C2936862 Bardet-Biedl syndrome;Bardet-Biedl syndrome 1 germline;unknown 11 66514679 GAACAAGACCTTTGGAACCAGGCCAAAGAGGTAAATAAATAACATGGGAGTTGGGAACCAG 66642398 103149 NM_000531.5(OTC):c.586G>A (p.Asp196Asn) OTC - MedGen:CN517202 not provided unknown X 38403663 CTGAAAGGTCTTACCCTCAGCTGGATCGGGGATGGGAACAATATCCTGCACTCCATCATGA 199473565 78528 NM_198056.2(SCN5A):c.1066G>A (p.Asp356Asn) SCN5A Feb 20, 2017 MedGen:C1142166,Orphanet:ORPHA130,SNOMED CT:418818005;MedGen:CN221547;MedGen:CN517202 Brugada syndrome;Brugada syndrome (shorter-than-normal QT interval);not provided germline 3 38606743 GAGAACCCCGACCACGGCTACACCAGCTTCGATTCCTTTGCCTGGGCCTTTCTTGCACTCT 267608673 49664 NM_007055.3(POLR3A):c.1114G>A (p.Asp372Asn) POLR3A Aug 02, 2012 MedGen:C1843200,OMIM:607694 Hypomyelinating leukodystrophy 7 not provided 10 78021617 GATTTTTCTGGCAGAACAGTCATCTCGCCCGACCCCAACCTCCGGATTGATGAGGTAGCTG 137852267 25663 NM_000133.3(F9):c.1324G>A (p.Gly442Arg) F9 Sep 11, 2013 MedGen:C0008533,OMIM:306900,Orphanet:ORPHA98879,SNOMED CT:41788008 Hereditary factor IX deficiency disease germline X 139562009 GGTGAAGAGTGTGCAATGAAAGGCAAATATGGAATATATACCAAGGTATCCCGGTATGTCA 778702777 216050 NM_000255.3(MUT):c.607G>A (p.Gly203Arg) MUT Jan 07, 2016 MedGen:C1855114,OMIM:251000 Methylmalonic aciduria due to methylmalonyl-CoA mutase deficiency germline 6 49457837 ATTCCAGTTCTTGCAAATTTTATAGTAACTGGAGAAGAACAAGGTGTACCTAAAGAGAAGC 587779663 107157 NM_000090.3(COL3A1):c.2337+1G>A (p.Gly762_Lys779del) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189001451 CCTGGCCCAGCTGGCCAGCCTGGAGATAAGGTAACCCTTAATACTACCTGGATATAAAAAG 398122942 76919 NM_001151.3(SLC25A4):c.111+1G>A SLC25A4 Feb 01, 2012 MedGen:C3809443,OMIM:615418 Mitochondrial DNA depletion syndrome 12b (cardiomyopathic type), autosomal recessive germline 4 185143484 CCCATCGAGAGGGTCAAACTGCTGCTGCAGGTGAGGACCGCGCGGTGCAAGAGGCGGGCGC 727504022 177846 NM_000255.3(MUT):c.280G>A (p.Gly94Arg) MUT Dec 04, 2013 MedGen:C1855114,OMIM:251000 Methylmalonic aciduria due to methylmalonyl-CoA mutase deficiency germline 6 49459187 GAACTTCCAGGAGTGAAGCCATTCACACGTGGACCATATCCTACCATGTATACCTTTAGGC 104893963 32023 NM_000165.4(GJA1):c.61G>A (p.Gly21Arg) GJA1 Feb 01, 2003 MedGen:C0812437,OMIM:164200 Oculodentodigital dysplasia germline 6 121446908 CTTGACAAGGTTCAAGCCTACTCAACTGCTGGAGGGAAGGTGTGGCTGTCAGTACTTTTCA 80338901 26909 NM_000137.2(FAH):c.1062+5G>A FAH Jun 16, 2017 Human Phenotype Ontology:HP:0003231,MedGen:C1879362;MedGen:C0268490,OMIM:276700,Orphanet:ORPHA882,SNOMED CT:124536006,SNOMED CT:410056006;MedGen:CN517202 Hypertyrosinemia;Tyrosinemia type I;not provided germline;unknown 15 80180230 TGGCTTCTGGGACCATCAGCGGGCCGGTGAGTATCTGGCTGCACTGAGGGCTGCCCACGCA 267607514 77412 NM_002055.4(GFAP):c.994G>A (p.Glu332Lys) GFAP Jan 08, 2015 MedGen:C0270726,OMIM:203450,Orphanet:ORPHA58,SNOMED CT:81854007;MedGen:C0270726,OMIM:203450,Orphanet:ORPHA58,SNOMED CT:81854007;MedGen:CN517202 Alexander's disease;Alexander's disease;not provided germline 17 44911369 GCCAGTTATCAGGAGGCGCTGGCGCGGCTGGAGGAAGAGGGGCAGAGCCTCAAGGACGAGA 59285727 31209 NM_002055.4(GFAP):c.236G>A (p.Arg79His) GFAP Nov 08, 2016 MedGen:C0270726,OMIM:203450,Orphanet:ORPHA58,SNOMED CT:81854007;MedGen:C0270726,OMIM:203450,Orphanet:ORPHA58,SNOMED CT:81854007;MedGen:CN517202 Alexander's disease;Alexander's disease;not provided germline 17 44915251 AGCGGGCAGAGATGATGGAGCTCAATGACCGCTTTGCCAGCTACATCGAGAAGGTTCGCTT 111569862 172349 NM_170707.3(LMNA):c.1609-1G>A LMNA Feb 09, 2016 MedGen:C1834653,OMIM:159001,Orphanet:ORPHA264;EFO:EFO_0000407,Human Phenotype Ontology:HP:0001644,MedGen:C0007193,Orphanet:ORPHA217604,SNOMED CT:195021004;MedGen:CN517202 Limb-girdle muscular dystrophy, type 1B;Primary dilated cardiomyopathy;not provided germline 1 156137653 ACCCTTGGACCTGGTTCCATGTCCCCACCAGGAAGTGGCCATGCGCAAGCTGGTGCGCTCA 80356914 70276 NM_007294.3(BRCA1):c.5511G>A (p.Trp1837Ter) BRCA1 Sep 08, 2016 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome germline 17 43045759 GTGTGAGGCACCTGTGGTGACCCGAGAGTGGGTGTTGGACAGTGTAGCACTCTACCAGTGC 193929355 34055 NM_000525.3(KCNJ11):c.964G>A (p.Glu322Lys) KCNJ11 Feb 08, 2013 Human Phenotype Ontology:HP:0000819,MedGen:C0011849,SNOMED CT:73211009;MedGen:C1833104,OMIM:606176,Orphanet:ORPHA99885 Diabetes mellitus;Permanent neonatal diabetes mellitus germline 11 17387128 GGCCAGCGCTTTGTGCCCATTGTAGCTGAGGAGGACGGACGTTACTCTGTGGACTACTCCA 886044737 237676 NM_000350.2(ABCA4):c.3813G>A (p.Glu1271=) ABCA4 Jan 01, 2016 MeSH:C535804,MedGen:C1855465,OMIM:248200 Stargardt disease 1 germline;unknown 1 94037145 TTTTGGAATTTCTGACACTCCCCTGGAAGAGGTAAAGTAGAGATTCCAGCTGGTTTCTGTC 121908797 44521 NM_000492.3(CFTR):c.2988G>A (p.Gln996=) CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008;MedGen:C0238339,OMIM:167800,Orphanet:ORPHA676,SNOMED CT:68072000 Cystic fibrosis;Hereditary pancreatitis germline;unknown 7 117606753 TCTGCCTCTTACCATATTTGACTTCATCCAGGTATGTAAAAATAAGTACCGTTAAGTATGT 121434416 21645 NM_006702.4(PNPLA6):c.2669G>A (p.Arg890His) PNPLA6 Mar 01, 2008 MedGen:C2677586,OMIM:612020,Orphanet:ORPHA139480 Spastic paraplegia 39 germline 19 7555041 GCTCGGGGCACCTGCACCTGCGCTGTCCGCGCCGCCTCTTTTCGCGCCGCAGCCCTGCCAA 387907080 39955 NM_025099.5(CTC1):c.775G>A (p.Val259Met) CTC1 Jan 22, 2012 MedGen:C2677299,OMIM:612199 Cerebroretinal microangiopathy with calcifications and cysts 1 germline 17 8237392 CTTGGTAGATCACACCCAGCTGTCACCCACGTGTCCATCATCGTGCAGGTGAGGACTGGGG 113994137 33345 NM_139276.2(STAT3):c.1268G>A (p.Arg423Gln) STAT3 Jun 07, 2012 MedGen:C0022398,OMIM:147060,SNOMED CT:50926003 Hyperimmunoglobulin E syndrome germline 17 42329423 TGAGGGAGCAGAGATGTGGGAATGGGGGCCGAGCCAATTGTGATGTAAGTTTTGTTGGGGA 104894019 29928 NM_000522.4(HOXA13):c.1107G>A (p.Trp369Ter) HOXA13 Feb 01, 1997 MedGen:C1841679,OMIM:140000,Orphanet:ORPHA2438 Hand foot uterus syndrome germline 7 27198258 GAATCTCTCTGAGCGGCAGGTCACAATCTGGTTCCAGAACAGGAGGGTTAAAGAGAAAAAA 587776975 59812 NM_001242896.1(DEPDC5):c.4107G>A (p.Trp1369Ter) DEPDC5 Feb 19, 2015 Gene:50987,MedGen:C1858477,OMIM:604364 Epilepsy, familial focal, with variable foci 1 germline 22 31893655 CGTGAACAACCGCACAGACCGGCTGGAGTGGTGCAGCTGTTATTACCATGGCAACTTTTCT 745672593 404860 NM_001243093.1(FYB1):c.423G>A (p.Trp141Ter) FYB1 Apr 21, 2017 MedGen:C2678311,OMIM:273900 Thrombocytopenia 3 germline 5 39202568 CAAAGAAGATTCCAAACCTACATTTCCCTGGCCTCCTGGAAACAAGCCATCTCTTCACAGT 587779559 107011 NM_000090.3(COL3A1):c.2915G>A (p.Gly972Asp) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189004348 CAGGCATGCCAGGTCCTAGGGGAAGCCCTGGCCCTCAGGGTGTCAAGGTGAGTATAGTCAT 587783491 169234 NM_004380.2(CREBBP):c.4133+1G>A CREBBP Oct 30, 2013 MedGen:C0035934,OMIM:180849,Orphanet:ORPHA353277,SNOMED CT:45582004 Rubinstein-Taybi syndrome germline 16 3740398 GGTGGAGGTCAAGCCCGGGATGAAGTCACGGTCAGTGTGCCTGCTCTCTACAGTGCTCTGC 797044435 20893 NM_022336.3(EDAR):c.51+1G>A EDAR Oct 01, 2004 MedGen:C0406702,OMIM:224900,Orphanet:ORPHA248,SNOMED CT:27025001 Autosomal recessive hypohidrotic ectodermal dysplasia syndrome germline 2 108930963 ACGCAGACGCCCTGGCTCCCCGTCCTGGTGGTAAGTGGTCTGAGCCCCTTACCCCCACAGC 151344520 20509 NM_006796.2(AFG3L2):c.2071G>A (p.Glu691Lys) AFG3L2 May 17, 2011 MedGen:C1853249,OMIM:610246,Orphanet:ORPHA101109 Spinocerebellar ataxia 28 germline 18 12337445 GGGGACATGGTATTGGAGAAACCTTACAGTGAAGCCACTGCAAGATTGATAGATGATGAAG 74315390 22421 NM_172107.3(KCNQ2):c.916G>A (p.Ala306Thr) KCNQ2 Mar 31, 2016 MedGen:C1852587,OMIM:121200 Benign familial neonatal seizures 1 germline 20 63439609 ACCTTCACCCTCATCGGTGTCTCCTTCTTCGCGCTGCCTGCAGTAAGTCCAGCTGCCCCTG 375628303 442968 NM_001271208.1(NEB):c.3255+1G>A NEB Aug 29, 2016 MedGen:C1850569,OMIM:256030;MedGen:CN517202 Nemaline myopathy 2;not provided germline 2 151679720 GCCAAAGCTGCCAGGCAGGCGGCGAGTGACGTAAGTCCAGCTGTGGTCATACATGGGCAAC 1114167418 413952 NM_000089.3(COL1A2):c.856G>A (p.Gly286Ser) COL1A2 - MedGen:C0023931,OMIM:166200,SNOMED CT:385482004 Osteogenesis imperfecta type I unknown 7 94409385 GCTGGTCCCGCCGGTCCCCGTGGTGAAGTGGGTCTTCCAGGCCTCTCCGGCCCCGTTGGAC 397514565 48303 NM_006218.3(PIK3CA):c.1133G>A (p.Cys378Tyr) PIK3CA Dec 08, 2014 MedGen:C1865285,OMIM:602501;MedGen:CN233161 Megalencephaly cutis marmorata telangiectatica congenita;PIK3CA related overgrowth spectrum somatic 3 179204576 GTGACAATGTGAACACTCAAAGAGTACCTTGTTCCAATCCCAGGTAAGGAAGTATATAGAT 80338864 21831 NM_001360.2(DHCR7):c.1342G>A (p.Glu448Lys) DHCR7 Jun 30, 2017 MedGen:C0175694,OMIM:270400,Orphanet:ORPHA818,SNOMED CT:43929004 Smith-Lemli-Opitz syndrome germline;unknown 11 71435461 ATCCTGCTGACCCACCGCTGCCTCCGGGACGAGCACCGCTGCGCCAGCAAGTACGGCCGGG 121917768 27297 NM_003361.3(UMOD):c.230G>A (p.Cys77Tyr) UMOD Mar 01, 2003 MedGen:C0268113,OMIM:162000,Orphanet:ORPHA209886,SNOMED CT:46785007 Familial juvenile gout germline 16 20349071 ATGAGTGCGCCATTCCTGGAGCTCACAACTGCTCCGCCAACAGCAGCTGCGTAAACACGCC 121908638 21365 NM_000050.4(ASS1):c.539G>A (p.Ser180Asn) ASS1 Mar 10, 2017 MedGen:C0175683,OMIM:215700,Orphanet:ORPHA187;MedGen:CN517202 Citrullinemia type I;not provided germline 9 130470877 CCATCCCGGTCACTCCCAAGAACCCGTGGAGCATGGATGAGAACCTCATGCACATCAGGTA 72653772 260087 NM_001171.5(ABCC6):c.1553G>A (p.Arg518Gln) ABCC6 May 23, 2017 MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005;MedGen:CN517202 Pseudoxanthoma elasticum;not provided germline 16 16190246 GAGCCTTTCTGGACAGAGTCCTGGGCATCCGAGGCCAGGAGCTGGGCGCCTTGCGGACCTC 121918287 17781 NM_004183.3(BEST1):c.949G>A (p.Val317Met) BEST1 Jan 01, 2008 MedGen:C3888198,OMIM:611809,Orphanet:ORPHA139455 Bestrophinopathy, autosomal recessive germline 11 61959892 TGTGGGACTTCTTCTGTCCCTGGTGACCAGGTGTCCCTGTTGGCTGTGGATGAGATGCACC 776407305 440192 NM_001080463.1(DYNC2H1):c.9353+1G>A DYNC2H1 Jun 01, 2017 MedGen:C0265275,Orphanet:ORPHA474,SNOMED CT:75049004;MedGen:CN674505 Jeune thoracic dystrophy;Short-rib polydactyly syndrome type III maternal;unknown 11 103223087 TTTGGAAACTGAACAGGCAGGATTAGAATCGTAAGTGAAATATAAAATATAAACAATTCTA 137852854 17716 NM_182760.3(SUMF1):c.653G>A (p.Cys218Tyr) SUMF1 May 16, 2003 MedGen:C0268263,OMIM:272200,Orphanet:ORPHA585,SNOMED CT:54898003 Multiple sulfatase deficiency germline 3 4418082 ATGTGTCCTGGAATGATGCGGTTGCCTACTGCACTTGGGCAGGGAAGCGGCTGCCCACGGA 727504276 175147 NM_000256.3(MYBPC3):c.3335G>A (p.Trp1112Ter) MYBPC3 Mar 04, 2013 MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005 Primary familial hypertrophic cardiomyopathy germline 11 47332969 TGCCTCCCCTCCCTCCCTGCCCCCAGGAGTGGTTCACCGTCTTGGAGCATTACCGCCGCAC 1060499941 390709 NM_198056.2(SCN5A):c.6048G>A (p.Val2016=) SCN5A - MedGen:CN221565 Arrhythmogenic right ventricular dysplasia/cardiomyopathy germline 3 38550324 TTCTCCGGACAGGGACCGTGAGTCCATCGTGTGAGCCTCGGCCTGGCTGGCCAGGACACAC 121918706 27605 NM_001252634.1(THRB):c.728G>A (p.Arg243Gln) THRB Jan 03, 2012 MedGen:C2937288,OMIM:188570 Thyroid hormone resistance, generalized, autosomal dominant germline 3 24143511 ACGCCCAAGGCAGCCACTGGAAGCAAAAACGGAAATTCCTGGTAAGGCTTCCTTGCACAGA 797044448 29410 NM_000302.3(PLOD1):c.579+1G>A PLOD1 Jan 04, 2013 MedGen:C0268342,OMIM:225400,Orphanet:ORPHA1900,SNOMED CT:25606004 Ehlers-Danlos syndrome, hydroxylysine-deficient germline 1 11952736 ACCAAGATCTTCTTGGACCCGGAGAAGAGGGTAAGAGGCAGTGGGCGGGCCAAGGAGAGGG 772842361 481604 NM_012233.2(RAB3GAP1):c.2103G>A (p.Trp701Ter) RAB3GAP1 Jan 19, 2018 MedGen:CN517202 not provided germline 2 135153690 AGGTTGCTCCCTGGAAGATTTTGTGAGGTGGTATTCACCCCGGGATTATATTGAAGAGGAG 121912491 29573 NM_002292.3(LAMB2):c.737G>A (p.Arg246Gln) LAMB2 Sep 01, 2006 MedGen:C3280113,OMIM:614199,Orphanet:ORPHA306507 Nephrotic syndrome, type 5, with or without ocular abnormalities germline 3 49131128 CCTCAGACCTGTTGAAGATCACCAACCTACGGGTGAACCTGACTCGTCTACACACGTTGGG 587776684 23150 NM_006982.2(ALX1):c.531+1G>A ALX1 May 14, 2010 MedGen:C3150706,OMIM:613456,Orphanet:ORPHA306542 Frontonasal dysplasia 3 germline 12 85283877 AGGACAGAGCTCACTGAGGCCAGGGTCCAGGTAGGAGCCAAAAAGAGGCCTTGATGGATGG 61282106 29532 NM_170707.3(LMNA):c.1394G>A (p.Gly465Asp) LMNA Jan 22, 2016 MedGen:C1720860,OMIM:151660,Orphanet:ORPHA2348;MedGen:CN517202 Familial partial lipodystrophy 2;not provided germline 1 156136934 CCCTATCTTCCCGGCAGGACCAGTCCATGGGCAATTGGCAGATCAAGCGCCAGAATGGAGA 755562733 200675 NM_138413.3(HOGA1):c.733G>A (p.Val245Ile) HOGA1 Nov 27, 2014 MedGen:C3150878,OMIM:613616,Orphanet:ORPHA93600 Primary hyperoxaluria, type III germline 10 97601889 GCTGTGGGGGGCGTCTGCGCCCTGGCCAATGTCCTGGGGGCTCAGGTGTGCCAGCTGGAGC 121909657 31308 NM_182925.4(FLT4):c.2563G>A (p.Ala855Thr) FLT4 Jun 01, 2009 MedGen:C1704423,OMIM:153100,Orphanet:ORPHA79452,SNOMED CT:399889006 Hereditary lymphedema type I germline 5 180619749 GCCCCGACAGGGAGAGTGCTCGGCTACGGCGCCTTCGGGAAGGTGGTGGAAGCCTCCGCTT 879254901 434295 NM_000527.4(LDLR):c.1438G>A (p.Ala480Thr) LDLR - MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11113614 AGCAGAGACATCCAGGCCCCCGACGGGCTGGCTGTGGACTGGATCCACAGCAACATCTACT 727503252 175611 NM_000257.3(MYH7):c.2782G>A (p.Asp928Asn) MYH7 Apr 07, 2017 Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Hypertrophic cardiomyopathy;Primary familial hypertrophic cardiomyopathy;not provided germline 14 23424047 AAGGTGAAGGAGATGAACGAGAGGCTGGAGGATGAGGAGGAGATGAATGCTGAGCTCACTG 886041307 264879 NM_144773.3(PROKR2):c.458+1G>A PROKR2 Nov 09, 2015 MedGen:CN517202 not provided germline 20 5313911 CAATGCCTTGCTGGCCATTGCCATTGACAGGTGAGGATGGTGGGTGGGGTGAGTGGTGGGG 397517353 55204 NM_022124.5(CDH23):c.7776G>A (p.Trp2592Ter) CDH23 Jan 03, 2012 MedGen:C1832845,OMIM:601067 Usher syndrome, type 1D germline 10 71803324 GGCCACAGATGGTGGAGAGCCCCCACTCTGGGGCACCACCATGCTCCTGGTGGAGGTCATC 886041262 264902 NM_172107.3(KCNQ2):c.629G>A (p.Arg210His) KCNQ2 Jun 06, 2016 MedGen:C3150986,OMIM:613720,Orphanet:ORPHA439218;MedGen:CN517202 Early infantile epileptic encephalopathy 7;not provided germline 20 63444720 TGCGCTTCCTGCAGATTCTGCGGATGATCCGCATGGACCGGCGGGGAGGCACCTGGAAGCT 1085307215 414151 NM_001204.6(BMPR2):c.350G>A (p.Cys117Tyr) BMPR2 Aug 15, 2016 MedGen:C0152171,OMIM:178600,SNOMED CT:26174007;MedGen:CN169374 Primary pulmonary hypertension;not specified germline 2 202467621 CAATTCAGAATGGAACATACCGTTTCTGCTGTTGTAGCACAGATTTATGTAATGTCAACTT 387906926 39494 NM_019109.4(ALG1):c.434G>A (p.Gly145Asp) ALG1 Nov 01, 2010 MedGen:C2931005,OMIM:608540,Orphanet:ORPHA79327 Congenital disorder of glycosylation type 1K germline 16 5075431 TGCCTAGCATTGCTGTCTGCTGGTTCGTGGGCTGCCTTTGTGGAAGCAAGCTCGTCATTGA 266257355 28275 NM_000119.2(EPB42):c.922+1G>A EPB42 Jul 01, 1995 MedGen:C2675192,OMIM:612690 Spherocytosis type 5 germline 15 43209273 CCTGGGTGTTGGCTGCTGTTGCTTGCACAGGTTGGTCCCCTTGTCTCCTGTAGAGTGCCCT 587780538 136458 NM_000179.2(MSH6):c.1367G>A (p.Trp456Ter) MSH6 Mar 13, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Lynch syndrome;not provided germline 2 47799350 AACTGGGGCTGGTATTCATGAAAGGCAACTGGGCCCATTCTGGCTTTCCTGAAATTGCATT 72555392 15984 NM_000404.3(GLB1):c.176G>A (p.Arg59His) GLB1 Sep 29, 2016 MedGen:C0268272,OMIM:230600,Orphanet:ORPHA79256,SNOMED CT:18756002;MedGen:C1968747;MedGen:C0268273,OMIM:230650,Orphanet:ORPHA79257;MedGen:C0268271,OMIM:230500,Orphanet:ORPHA79255,SNOMED CT:238026007;MedGen:C0086652,OMIM:253010,Orphanet:ORPHA309310,SNOMED CT:238044004;MedGen:CN517202 GM1 gangliosidosis type 2;GM1-gangliosidosis, type I, with cardiac involvement;Gangliosidosis GM1 type 3;Infantile GM1 gangliosidosis;Mucopolysaccharidosis, MPS-IV-B;not provided germline;somatic 3 33072613 GCTACATCTCAGGAAGCATTCACTACTCCCGTGTGCCCCGCTTCTACTGGAAGGACCGGCT 121908151 231479 NM_004895.4(NLRP3):c.1711G>A (p.Gly571Arg) NLRP3 Jul 09, 2013 MedGen:CN517202 not provided germline 1 247425154 CTTCTGGAAAACTATGGCAAATTCGAAAAGGGGTATTTGATTTTTGTTGTACGTTTCCTCT 587779441 107106 NM_000090.3(COL3A1):c.656G>A (p.Gly219Asp) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188989415 CTTATTTTCAGGGCCCTCCAGGACCTCCTGGTGCTATAGGTCCATCTGGTCCTGCTGGAAA 121434288 18577 NM_130849.3(SLC39A4):c.1576G>A (p.Gly526Arg) SLC39A4 Jul 01, 2002 MedGen:C0221036,OMIM:201100,Orphanet:ORPHA37,SNOMED CT:37702000 Hereditary acrodermatitis enteropathica germline 8 144413288 GGCGCCGCCTTCGCGTCCTCCTGGAAGACCGGGCTGGCCACCTCGCTGGCCGTGTTCTGCC 267606882 24706 m.6264G>A MT-CO1 Nov 01, 1998 MedGen:CN029768 Familial colorectal cancer germline MT 6264 CTCCTGCTCGCATCTGCTATAGTGGAGGCCGGAGCAGGAACAGGTTGAACAGTCTACCCTC 104895504 16623 NM_001127255.1(NLRP7):c.352+1G>A NLRP7 Mar 01, 2006 MedGen:C2931618,OMIM:231090,Orphanet:ORPHA254685 Hydatidiform mole germline 19 54940930 CAGAAGAAGACTCGGAGTTAGCAAAGCCAGGTGGGTAAATACGGTCCTATGGTCATGAGTT 398123834 100330 NM_004019.2(DMD):c.1020G>A (p.Thr340=) DMD Sep 26, 2013 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009;MedGen:C3668940,OMIM:302045;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Becker muscular dystrophy;Dilated cardiomyopathy 3B;Duchenne muscular dystrophy germline X 31178668 GACTGTCTTAGAGGGGGACAACATGGAAACGTGAGTAGTAGCAAAAGCAGAACACACTCTT 1064793998 407147 NM_000162.3(GCK):c.184G>A (p.Val62Met) GCK Apr 20, 2017 MedGen:CN517202 not provided germline 7 44153325 GAGGCCAGTGTGAAGATGCTGCCCACCTACGTGCGCTCCACCCCAGAAGGCTCAGGTACCA 886039385 259855 NM_000238.3(KCNH2):c.2145+1G>A KCNH2 Aug 04, 2016 MeSH:D008133,MedGen:C0023976,SNOMED CT:9651007;MedGen:CN517202 Long QT syndrome;not provided germline 7 150950920 TCCTACACCAACGGCATCGACATGAACGCGGTGAGGCCACCAGAGCGTGGCCAGTGGGTGG -1 431554 NM_001110354.1(ZP3):c.400G>A (p.Ala134Thr) ZP3 Oct 09, 2017 MedGen:C1328577;MedGen:CN523306,OMIM:617712 Empty follicle syndrome;OOCYTE MATURATION DEFECT 3 de novo;germline;paternal 7 76429602 GGAAACCTGTCCATCGTGAGGACTAACCGCGCAGAGATTCCCATCGAGTGCCGCTACCCCA 137852466 25359 NM_000132.3(F8):c.6545G>A (p.Arg2182His) F8 Jan 01, 1995 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154863112 CAACTCATTATAGCATTCGCAGCACTCTTCGCATGGAGTTGATGGGCTGTGATTTAAATAG 120074140 17871 NM_000019.3(ACAT1):c.1138G>A (p.Ala380Thr) ACAT1 Aug 30, 1991 MedGen:C1536500,OMIM:203750,Orphanet:ORPHA134,SNOMED CT:124258007 Deficiency of acetyl-CoA acetyltransferase germline 11 108146334 GATCCCCAAAAAGTGAATATCAATGGAGGAGCTGTTTCTCTGGGACATCCAATTGGGTAGG 376610215 48037 NM_198506.4(LRIT3):c.983G>A (p.Cys328Tyr) LRIT3 Jan 10, 2013 MedGen:C3554399,OMIM:615058 Congenital stationary night blindness, type 1F germline 4 109869732 TTTCTTCCAAAGACGCTGGGGATTACAAATGTAAGGCCAAAAATCTGGCTGGGATGTCAGA 137852651 24223 NM_000095.2(COMP):c.1403G>A (p.Cys468Tyr) COMP Jul 01, 1995 MedGen:C0410538,OMIM:177170,Orphanet:ORPHA750,SNOMED CT:22567005 Pseudoachondroplastic spondyloepiphyseal dysplasia syndrome germline 19 18786051 ACTCAGACCACGATGGCCAGGGTGATGCCTGCGACGACGACGACGACAATGACGGAGTCCC 137852826 15559 NM_001999.3(FBN2):c.1171G>A (p.Glu391Lys) FBN2 Jun 13, 2012 MedGen:C0220668,OMIM:121050,Orphanet:ORPHA115,SNOMED CT:205821003 Congenital contractural arachnodactyly germline 5 128395182 GGGAGAATGACGAAAATGCAGTGCTGCTGTGAGCCTGGCCGCTGCTGGGGCATCGGAACCA 121917852 23905 NM_002181.3(IHH):c.283G>A (p.Glu95Lys) IHH Apr 30, 2009 Human Phenotype Ontology:HP:0009371,MedGen:C1862151,OMIM:112500,Orphanet:ORPHA93388 Type A1 brachydactyly germline 2 219060185 TACAATCCAGACATCATCTTCAAGGACGAGGAGAACACAGGCGCCGACCGCCTCATGACCC 121909544 33121 NM_001145.4(ANG):c.409G>A (p.Val137Ile) ANG Feb 01, 2008 MedGen:C2678468,OMIM:611895 Amyotrophic lateral sclerosis type 9 germline 14 20693973 GTTGTTGTTGCTTGTGAAAATGGCTTACCTGTCCACTTGGATCAGTCAATTTTCCGTCGTC 587784177 168250 NM_022455.4(NSD1):c.6050G>A (p.Arg2017Gln) NSD1 Mar 04, 2016 Human Phenotype Ontology:HP:0002194,MedGen:C1837658;Human Phenotype Ontology:HP:0000750,MedGen:C0454644;Human Phenotype Ontology:HP:0000750,MedGen:C0454644;Human Phenotype Ontology:HP:0001263,MedGen:C4020875;Human Phenotype Ontology:HP:0009890,MedGen:C3276036;Human Phenotype Ontology:HP:0000348,MedGen:C0239676;Human Phenotype Ontology:HP:0000316,MedGen:C0020534,OMIM:145400;Human Phenotype Ontology:HP:0002079,MedGen:C0344482;Human Phenotype Ontology:HP:0004324,MedGen:C0043094;Human Phenotype Ontology:HP:0000256,MedGen:C2243051,OMIM:248000;Human Phenotype Ontology:HP:0000938,MedGen:C0747078;Human Phenotype Ontology:HP:0001548,MedGen:C1849265;Human Phenotype Ontology:HP:0000307,MedGen:C1844505;Gene:5177,Human Phenotype Ontology:HP:0100602,MedGen:C0032914,OMIM:189800,Orphanet:ORPHA275555;Human Phenotype Ontology:HP:0002650,MedGen:C0037932;MedGen:CN035106,OMIM:117550;Human Phenotype Ontology:HP:0000098,MedGen:C0241240;MedGen:CN517202 Delayed gross motor development;Delayed speech and language development;Delayed speech and language development;Global developmental delay;High anterior hairline;High forehead;Hypertelorism;Hypoplasia of the corpus callosum;Increased body weight;Macrocephaly;Osteopenia;Overgrowth;Pointed chin;Preeclampsia/eclampsia 1;Scoliosis;Sotos syndrome 1;Tall stature;not provided germline;unknown 5 177283827 TTGATGCTGGTCCCAAAGGAAACTATGCTCGGTTCATGAATCATTGCTGCCAGCCCAACTG -1 471847 NM_000475.4(NR0B1):c.516G>A (p.Trp172Ter) NR0B1 May 16, 2017 MedGen:C1848296,OMIM:300018;MedGen:C0342482,OMIM:300200,SNOMED CT:237764004 46,XY sex reversal, type 2;Congenital adrenal hypoplasia, X-linked germline X 30308848 GCCCGAGGCACGGCCAGGGGGCGCGTGGTGGGACCGCTCCTACTTCGCGCAGAGGCCAGGG 137854471 31468 NM_000138.4(FBN1):c.3725G>A (p.Cys1242Tyr) FBN1 Jan 01, 1994 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006 Marfan syndrome germline 15 48483931 TGGTTTTATTCTTTGCAGACATCGATGAGTGTGAAGATAATCCCAATATCTGTGATGGTGG 122458145 26592 NM_001159702.2(FHL1):c.458G>A (p.Cys153Tyr) FHL1 Mar 01, 2008 MedGen:C2678015,OMIM:300718 Myopathy, reducing body, X-linked, childhood-onset germline X 136207918 CTAAAGGGGAGGACTTCTACTGCGTGACTTGCCATGAGACCAAGTTTGCCAAGCATTGCGT 1057518962 361095 NM_004006.2(DMD):c.1637G>A (p.Trp546Ter) DMD Jun 11, 2014 Human Phenotype Ontology:HP:0008981,MedGen:C1843057;Human Phenotype Ontology:HP:0003457,MedGen:C0476403;Human Phenotype Ontology:HP:0003458,MedGen:C4021726;Human Phenotype Ontology:HP:0001270,MedGen:C1854301;Human Phenotype Ontology:HP:0003394,MedGen:C0026821;Human Phenotype Ontology:HP:0001324,MedGen:C0151786 Calf muscle hypertrophy;EMG abnormality;EMG: myopathic abnormalities;Motor delay;Muscle cramps;Muscle weakness unknown X 32573812 TGGGAGATCGATGGGCAAACATCTGTAGATGGACAGAAGACCGCTGGGTTCTTTTACAAGA 148211042 214833 NM_005689.3(ABCB6):c.2168G>A (p.Arg723Gln) ABCB6 Dec 01, 2014 Gene:541461,MedGen:C1836705,OMIM:609153,Orphanet:ORPHA90044 Pseudohyperkalemia, familial, 2, due to red cell leak germline 2 219210799 CCACAGGGTACAGGACACAGGTGGGCGAGCGGGGACTGAAGCTGAGCGGCGGGGAGAAGCA 387906831 39202 NM_005216.4(DDOST):c.650G>A (p.Gly217Asp) DDOST May 14, 2014 MedGen:C3281084,OMIM:614507,Orphanet:ORPHA300536 Congenital order of glycosylation type 1r germline 1 20654660 ATAACCCTTTGGTGCTGGACATCCTGACGGGCTCTTCCACCTCTTACTCCTTCTTCCCGGA 28937294 25149 NM_000132.3(F8):c.5879G>A (p.Arg1960Gln) F8 May 01, 1990 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154904025 GCTTAGTAATGGCTCAGGATCAAAGGATTCGATGGTATCTGCTCAGCATGGGCAGCAATGA 104886267 36042 NM_000495.4(COL4A5):c.4069G>A (p.Gly1357Ser) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108680956 GAGGGGGAACCGGGACTTATTGGTCCTCCAGGTAAGACTTATTCCTGAAGATAGTTATACC 267607189 25903 NM_001111125.2(IQSEC2):c.2273G>A (p.Arg758Gln) IQSEC2 Jun 01, 2010 Gene:170530,MedGen:C2931498,OMIM:300551,OMIM:309530 Mental retardation, X-linked 1 germline X 53250303 ACAATGATGTGGTCCAGAGGCGGCACTACCGAATCGGCCTCAACCTCTTCAACAAGTGCGT 769369302 389127 NM_006295.2(VARS):c.3173G>A (p.Arg1058Gln) VARS Dec 11, 2017 Human Phenotype Ontology:HP:0012443,MedGen:C4021085;MedGen:CN679649,OMIM:617802 Abnormality of brain morphology;NEURODEVELOPMENTAL DISORDER WITH MICROCEPHALY, SEIZURES, AND CORTICAL ATROPHY germline;inherited 6 31779723 CCCTGTACACTTGCCTGGACGTTGGCCTGCGGCTGCTCTCACCCTTCATGCCCTTCGTGAC 80358145 46229 NM_007294.3(BRCA1):c.5467+1G>A BRCA1 Jun 30, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline;unknown 17 43047642 ATGCCTGGACAGAGGACAATGGCTTCCATGGTAAGGTGCCTGCATGTACCTGTGCTATATG 771820789 361012 NM_001042492.2(NF1):c.2709G>A (p.Val903=) NF1 Feb 03, 2018 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003 Hereditary cancer-predisposing syndrome;Neurofibromatosis, type 1 germline;unknown 17 31229324 ATTTATGGATCGGCTGTTGTCCTTAATGGTGTGTAACCATGAGAAAGTGGGACTTCAAATA 137853223 31022 NM_000515.4(GH1):c.626G>A (p.Arg209His) GH1 Nov 01, 2007 MedGen:C0271567,OMIM:173100,Orphanet:ORPHA231679,SNOMED CT:237687003 Autosomal dominant isolated somatotropin deficiency germline 17 63917337 TCGAGACATTCCTGCGCATCGTGCAGTGCCGCTCTGTGGAGGGCAGCTGTGGCTTCTAGCT 137852917 18138 NM_005670.3(EPM2A):c.835G>A (p.Gly279Ser) EPM2A Oct 01, 2005 MedGen:C0751783,OMIM:254780,Orphanet:ORPHA501,SNOMED CT:230425004 Lafora disease germline 6 145627577 GGGGTGGGCCGCTCCACCGCGGCTGTCTGCGGCTGGCTCCAGTATGTGATGGGCTGGAATC 121908629 21069 NM_001128227.2(GNE):c.830G>A (p.Arg277Gln) GNE Dec 29, 2015 MedGen:C1833373,OMIM:600737;MedGen:C1853926,OMIM:605820 Inclusion body myopathy 2;Nonaka myopathy germline;unknown 9 36236864 CATTGGATGCACTTATCTCATTTAACAAGCGGACCCTAGTCCTGTTTCCAAATATTGACGC 387907022 39776 NM_018006.4(TRMU):c.835G>A (p.Val279Met) TRMU Oct 31, 2016 MedGen:C2751567,OMIM:613070;MedGen:CN517202 Liver failure acute infantile;not provided germline 22 46353829 AACATAGGTGGCCTGAGAGAGCCCTGGTACGTGGTGGAGAAGGACAGCGTCAAGGGTGACG 121913676 28928 NM_001127500.2(MET):c.3804G>A (p.Met1268Ile) MET Dec 26, 2014 MedGen:C0279606;MeSH:D009369,MedGen:C0027651,SNOMED CT:108369006 Childhood hepatocellular carcinoma;Neoplasm somatic 7 116783421 AACAGGTGCAAAGCTGCCAGTGAAGTGGATGGCTTTGGAAAGTCTGCAAACTCAAAAGTTT 63750622 260084 NM_001171.5(ABCC6):c.4016G>A (p.Arg1339His) ABCC6 Mar 04, 2016 MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005;MedGen:CN517202 Pseudoxanthoma elasticum;not provided germline 16 16154898 CCATTGCCCACGTGGGGCTGCACACACTGCGCTCCAGGATCAGCATCATCCCCCAGGTGAG 397515982 51820 NM_000256.3(MYBPC3):c.2670G>A (p.Trp890Ter) MYBPC3 Aug 31, 2017 Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Hypertrophic cardiomyopathy;Primary familial hypertrophic cardiomyopathy;not provided germline 11 47335944 CGTCTCTGACACCACGGTCTCCCTCAAGTGGCGGCCCCCAGAGCGCGTGGGAGCAGGAGGC 587779435 107166 NM_000090.3(COL3A1):c.1915G>A (p.Gly639Arg) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188997745 AAAGGAGACACAGGACCCCCTGGTCCACAAGGATTACAAGTAAGAACTTGTTATTTAAATG 72653745 426861 NM_001171.5(ABCC6):c.3668G>A (p.Trp1223Ter) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16159549 CCCAGACACTGCAGTGGGTTGTTCGCAACTGGACAGACCTAGAGAACAGCATCGTGTCAGT 1057516825 357645 NM_019098.4(CNGB3):c.1480+1G>A CNGB3 Mar 27, 2017 MedGen:C1849792,OMIM:262300 Achromatopsia 3 germline;unknown 8 86628918 AATATACATGGGACTCTCAAAGAATGCTAGGTAAGCATGGCAGATTACCGATTAAATTCCT 587776734 25581 NM_171998.3(RAB39B):c.215+1G>A RAB39B Feb 12, 2010 MedGen:C1846038,OMIM:300271 Mental retardation, X-linked 72 germline X 155264073 CTGGGATACCGCGGGTCAAGAGAGGTTCAGGTGGGAGCGCAGTCCGGGCCCGCAAGCAGTG 121908931 21652 NM_004086.2(COCH):c.355G>A (p.Ala119Thr) COCH Oct 01, 2003 MedGen:C1832425,OMIM:601369 Deafness, autosomal dominant 9 germline 14 30878926 ATCCAGTCTCAAATGCTTTCTAGATGGTCTGCTTCTTTCACAGTAACTAGTAGGTATAATT 878853275 237802 NM_001183.5(ATP6AP1):c.1284G>A (p.Met428Ile) ATP6AP1 Feb 13, 2017 MedGen:C3151226,OMIM:613860,Orphanet:ORPHA331190 Immunodeficiency due to ficolin 3 deficiency germline X 154435762 TGCCAGCTTCTTCTCCCCCGGCATCTGGATGGGGCTGCTCACCTCCCTGTTCATGCTCTTC 786202081 184491 NM_144997.6(FLCN):c.250-1G>A FLCN Apr 28, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0346010,OMIM:135150,Orphanet:ORPHA122,SNOMED CT:110985001;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Multiple fibrofolliculomas;not provided germline 17 17226323 TAACAGATTTACTTTTCCTTTTCATGGACAGGGCTGCCGGTCACTTGCTGCAGGGCACCCG 121909764 21820 NM_001360.2(DHCR7):c.730G>A (p.Gly244Arg) DHCR7 Aug 01, 1998 MedGen:C0175694,OMIM:270400,Orphanet:ORPHA818,SNOMED CT:43929004 Smith-Lemli-Opitz syndrome germline 11 71438980 GACTTCAAGCTGTTCTTCAATGGGCGCCCCGGGATCGTCGCCTGGACCCTCATCAACCTGT 80338784 20950 NM_000334.4(SCN4A):c.2006G>A (p.Arg669His) SCN4A Apr 28, 2009 MedGen:CN074266,OMIM:170500;MedGen:C3714580,OMIM:170400;MedGen:C2750061,OMIM:613345 Hyperkalemic Periodic Paralysis Type 1;Hypokalemic periodic paralysis 1;Hypokalemic periodic paralysis, type 2 germline 17 63959278 TGGCCAACGTACAGGGACTGTCTGTGCTACGCTCCTTCCGTCTGGTACACAAAAGCCCCAG 765034336 367602 NM_000094.3(COL7A1):c.6751G>A (p.Gly2251Arg) COL7A1 Jan 10, 2017 MedGen:CN517202 not provided germline 3 48572942 GGCAGCCCTGACAGAGCTCTTCCCTCTCAGGGGGAGACAGGGAAGCCGGGAGCCCCAGGTC 281875199 79654 NM_003070.4(SMARCA2):c.2554G>A (p.Glu852Lys) SMARCA2 May 24, 2017 MedGen:CN517202 not provided germline 9 2086856 TAGATTCGGTGGAAATACATGATAGTGGACGAAGGCCACCGAATGAAGAATCACCACTGCA 779007169 189161 NM_014714.3(IFT140):c.3827G>A (p.Gly1276Glu) IFT140 Jan 01, 2015 Human Phenotype Ontology:HP:0000547,MeSH:D012174,MedGen:C0035334,OMIM:268000,Orphanet:ORPHA791,SNOMED CT:28835009 Retinitis pigmentosa germline 16 1520177 TGAAGAACATCATCGGCTTCTACACCAAGGGGCGGGCCCTGGACCTCCTGGCTGGCTTTTA -1 470684 NM_004006.2(DMD):c.9649+1G>A DMD May 30, 2017 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Duchenne muscular dystrophy germline X 31206581 GTAAAGCACATTTGGAAGACAAGTACAGATGTAAGTCGTGTATATTAATGCTGTATTCTTT 886041188 264181 NM_000094.3(COL7A1):c.5027G>A (p.Gly1676Glu) COL7A1 Jul 18, 2017 MedGen:CN517202 not provided germline 3 48580606 GGGGGCCTGTGGGTGAAAAGGGAGACCAGGGAGATCCTGGAGAGGATGGACGAAATGTGAG 555164150 420016 NM_004928.2(C21orf2):c.331G>A (p.Val111Met) C21orf2 Jul 12, 2017 MedGen:C1865695,OMIM:602271,Orphanet:ORPHA168549 Spondylometaphyseal dysplasia axial germline 21 44333075 GGCACCAGCCCCCACCGCTACCGCATGACCGTGCTGCGCACCCTGCCGCGCCTACAGAAGC 34704828 380595 NM_000518.4(HBB):c.-29G>A HBB May 14, 2015 MedGen:C0005283,OMIM:613985,Orphanet:ORPHA848,SNOMED CT:65959000 beta Thalassemia germline 11 5227050 CTATTGCTTACATTTGCTTCTGACACAACTGTGTTCACTAGCAACCTCAAACAGACACCAT 786204828 187200 NM_001098.2(ACO2):c.776G>A (p.Gly259Asp) ACO2 Dec 01, 2014 MedGen:C3281192,OMIM:614559,Orphanet:ORPHA313850 Infantile cerebellar-retinal degeneration germline 22 41515858 TGAAGGTGGCAGGCATCCTCACGGTGAAAGGTGGCACAGGTGCAATCGTGGAATACCACGG 121912948 32164 NM_080680.2(COL11A2):c.2423G>A (p.Gly808Glu) COL11A2 Dec 01, 1999 MedGen:C1866095,OMIM:601868 Deafness, autosomal dominant 13 germline 6 33174534 CTGGTCTGCCTGGCTATCCTGGACGTCAGGGACCCAAGGTGATGCCATGCCCCATACGTGC 672601330 33151 NM_000666.2(ACY1):c.360-1G>A ACY1 Mar 01, 2006 MedGen:C1835922,OMIM:609924,Orphanet:ORPHA137754 Aminoacylase 1 deficiency germline 3 51986254 CTCCCCCAGCACCTGGCTTATGCCCCCTCAGGTACCTGGAAGCTGTGAGGAGGCTGAAGGT 777105668 214431 NM_004366.5(CLCN2):c.1507G>A (p.Gly503Arg) CLCN2 Sep 09, 2015 MedGen:C3810242,OMIM:615651,Orphanet:ORPHA363540 Leukoencephalopathy with ataxia germline 3 184354548 CGGATTGTGCCTGGGGGCTACGCTGTGGTCGGTGAGTGCCTCAGGTCCCATCGGCCTTGGG 193919339 19013 NM_015120.4(ALMS1):c.10992G>A (p.Trp3664Ter) ALMS1 May 01, 2002 MedGen:C0268425,OMIM:203800,Orphanet:ORPHA64,SNOMED CT:63702009 Alstrom syndrome germline 2 73572866 TAGCAGAGGGGAACGAAGTGTGAAGGAATGGAGTGGTAGACAACAGCAGAGAAATAAGCTT 387906911 39440 NM_005689.3(ABCB6):c.169G>A (p.Ala57Thr) ABCB6 Jan 13, 2012 MedGen:C3281027,OMIM:614497 Microphthalmia, isolated, with coloboma 7 germline 2 219218505 GCTCTTCCCTGCAGACGCCGGGAGCGGCCCGCTGGTGCTGATTCGCTGTCTTGGGGGGCCG 727502870 172318 NM_004130.3(GYG1):c.749G>A (p.Trp250Ter) GYG1 Dec 01, 2014 MedGen:C4015452,OMIM:616199,Orphanet:ORPHA456369 Polyglucosan body myopathy 2 germline 3 149024193 TGACTCATCCAGAGTTTCTCATCCTGTGGTGGAACATCTTTACCACCAACGTTTTACCTCT 587779447 106881 NM_000090.3(COL3A1):c.2842G>A (p.Gly948Arg) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189004275 TATCTGTATTAGGGAGCTCCAGGCCCACTTGGGATTGCTGGGATCACTGGAGCACGGGGTC 67693970 413995 NM_000088.3(COL1A1):c.2461G>A (p.Gly821Ser) COL1A1 Jan 13, 2017 MedGen:C0023931,OMIM:166200,SNOMED CT:385482004;MedGen:C0268363,OMIM:166220,Orphanet:ORPHA216820,SNOMED CT:205497004 Osteogenesis imperfecta type I;Osteogenesis imperfecta with normal sclerae, dominant form germline;paternal;unknown 17 50190099 CCGCCCTGCTTCCTCCCCCAGGGTGCTGACGGCCAACCTGGTGCTAAAGGCGAACCTGGTG 78846775 19223 NM_033629.4(TREX1):c.598G>A (p.Asp200Asn) TREX1 Mar 13, 2014 MedGen:C0796126,OMIM:225750;MedGen:C3150315 Aicardi Goutieres syndrome 1;Aicardi Goutieres syndrome 1, autosomal dominant germline 3 48467253 TCCCCTCCAGACTCGCACACGGCTGAGGGTGATGTCCTGGCCCTGCTCAGCATCTGTCAGT 758252808 216927 NM_006895.2(HNMT):c.179G>A (p.Gly60Asp) HNMT Oct 15, 2015 MedGen:C4225220,OMIM:616739 Mental retardation, autosomal recessive 51 germline 2 137970206 CAAAATCAGAAATTAAGATTCTAAGCATAGGCGGAGGTGCAGGTATGAGTAATATATTTTT 267608679 49667 NM_007055.3(POLR3A):c.2171G>A (p.Cys724Tyr) POLR3A Aug 02, 2012 MedGen:C1843200,OMIM:607694 Hypomyelinating leukodystrophy 7 not provided 10 78004792 ATGAGTTGCTGAATGCCGGCTACAAGAAATGTGATGAGTACATCGAAGCCCTGAACACGGG 387906755 39034 NM_001698.2(AUH):c.559G>A (p.Gly187Ser) AUH Jun 30, 2014 MedGen:C0342727,OMIM:250950,Orphanet:ORPHA67046,SNOMED CT:237950009;MedGen:CN517202 3-Methylglutaconic aciduria;not provided germline 9 91298023 GCAGCAATAGATGGACTCGCTTTAGGTGGTGGTCTTGAACTGGCTTTAGCCTGTGATATAC 74315347 20407 NM_014625.3(NPHS2):c.538G>A (p.Val180Met) NPHS2 Aug 16, 2016 MedGen:C1868672,OMIM:600995,Orphanet:ORPHA656;MedGen:CN517202 Nephrotic syndrome, idiopathic, steroid-resistant;not provided germline;unknown 1 179557227 CTGTCATCCAAACTTTTTTCTGCCTAGATCGTGACCAAAGACATGTTTATAATGGAGATAG 104886308 25506 NM_000495.4(COL4A5):c.5030G>A (p.Arg1677Gln) COL4A5 Mar 03, 2017 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917;MedGen:CN517202 Alport syndrome, X-linked recessive;not provided germline X 108696350 AAGCAGGAGACTTGAGGACACGAATTAGCCGATGTCAAGTGTGCATGAAGAGGACATAACA 104893790 28084 NM_000539.3(RHO):c.269G>A (p.Gly90Asp) RHO Feb 17, 1994 MedGen:C1864869,OMIM:610445 Congenital stationary night blindness, autosomal dominant 1 germline 3 129529002 CCGTGGCTGACCTCTTCATGGTCCTAGGTGGCTTCACCAGCACCCTCTACACCTCTCTGCA 111033206 52321 NM_000260.3(MYO7A):c.1556G>A (p.Gly519Asp) MYO7A May 19, 2016 MedGen:C1568247,OMIM:276900,Orphanet:ORPHA231169 Usher syndrome, type 1 germline 11 77162854 GGGCTCACAGCTGCCCCTCCACTCCCCAGGGCACAGACACCACCATGTTACACAAGCTGAA 786205820 188661 NM_000891.2(KCNJ2):c.935G>A (p.Arg312His) KCNJ2 Nov 08, 2016 MedGen:CN517202 not provided germline 17 70175974 TGGAAGCCACTGCCATGACGACACAGTGCCGTAGCTCTTATCTAGCAAATGAAATCCTGTG 587779408 106596 NM_000543.4(SMPD1):c.739G>A (p.Gly247Ser) SMPD1 Aug 10, 2014 MedGen:C1866282,OMIM:601780,Orphanet:ORPHA228363;MedGen:C0268242,OMIM:257200,Orphanet:ORPHA77292,SNOMED CT:52165006 Ceroid lipofuscinosis neuronal 6;Niemann-Pick disease, type A inherited;unknown 11 6391804 CCCGCATCCCGGCCAGGTGCCGGATACTGGGGCGAATACAGCAAGTGTGACCTGCCCCTGA 786204030 185765 NM_005957.4(MTHFR):c.1683G>A (p.Trp561Ter) MTHFR - MedGen:C1856058,OMIM:236250 Homocysteinemia due to MTHFR deficiency germline 1 11791276 CCCTGAACTGCAGCCGAATGCTGTCACTTGGGGCATCTTCCCTGGGCGAGAGATCATCCAG 80356624 23705 NM_000525.3(KCNJ11):c.602G>A (p.Arg201His) KCNJ11 May 03, 2013 MedGen:C1833102;Human Phenotype Ontology:HP:0000857,MedGen:C3278636;MedGen:C1833104,OMIM:606176,Orphanet:ORPHA99885;MedGen:C1864623,OMIM:610582 Diabetes mellitus, permanent neonatal, with neurologic features;Neonatal insulin-dependent diabetes mellitus;Permanent neonatal diabetes mellitus;Transient neonatal diabetes mellitus 3 germline 11 17387490 TGCGCCACGGCCGCCTCTGCTTCATGCTACGTGTGGGTGACCTCCGCAAGAGCATGATCAT 879254090 419609 NM_000038.5(APC):c.1548G>A (p.Lys516=) APC Nov 20, 2015 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 5 112827247 AAACTTGACTTTTGGAGATGTAGCCAACAAGGTATGTTTTTATAACATGTATTTCTTAAGA 727504005 177825 NM_020166.4(MCCC1):c.640-1G>A MCCC1 Apr 07, 2014 MedGen:CN028786,OMIM:210200 3 Methylcrotonyl-CoA carboxylase 1 deficiency germline 3 183071121 GTTGTAGTCATAATCATCTTTTCTCTCTTAGGGAATGAGGATTGTTAGATCAGAACAAGAA 869312940 226907 NM_003130.3(SRI):c.206-1G>A SRI Apr 08, 2014 MeSH:D030342,MedGen:C0950123 Inborn genetic diseases germline 7 88210926 TAATATGTATGTACTTTTCTTGATTTAACAGCTTTTAACCTGGAGACTTGCCGGCTTATGG 104894569 27046 NM_000151.3(G6PC):c.551G>A (p.Gly184Glu) G6PC May 01, 1996 MedGen:C2919796,OMIM:232200 Glycogen storage disease type 1A germline 17 42909407 CTGCTCATTTTCCTCATCAAGTTGTTGCTGGAGTCCTGTCAGGTATGGGCTGATCTGACTC 121908679 21253 NM_001126105.2(SLC7A7):c.726G>A (p.Trp242Ter) SLC7A7 Jan 01, 2008 MedGen:C0268647,OMIM:222700,Orphanet:ORPHA470,SNOMED CT:303852004 Lysinuric protein intolerance germline 14 22778837 GTACTCAGCTCTGTTCTCCTACTCAGGCTGGGACACCCTCAACTATGTCACTGAAGAGATC 387906272 17097 NM_152443.2(RDH12):c.658+1G>A RDH12 Oct 01, 2004 MedGen:C2675186,OMIM:612712 Leber congenital amaurosis 13 germline 14 67727191 TTACTCGTGAGCTGGCCAAGAGGCTCCAAGGTAAGTCTGGAGAAAGAGGAATAGCAAAAAT 121964962 15156 NM_000071.2(CBS):c.919G>A (p.Gly307Ser) CBS Jul 19, 2017 na;Human Phenotype Ontology:HP:0002156,MedGen:C0019880;MedGen:C3150344,OMIM:236200;MedGen:CN068393;MedGen:CN517202 HYPERHOMOCYSTEINEMIA, THROMBOTIC, CBS-RELATED;Homocystinuria;Homocystinuria due to CBS deficiency;Homocystinuria, pyridoxine-nonresponsive;not provided germline;unknown 21 43062988 GAGCAGACAACCTACGAGGTGGAAGGGATCGGCTACGACTTCATCCCCACGGTGCTGGACA -1 428730 NM_000162.3(GCK):c.667G>A (p.Gly223Ser) GCK Aug 31, 2016 MedGen:C1841962,OMIM:125851;MedGen:CN517202 Maturity-onset diabetes of the young, type 2;not provided germline 7 44149772 TGCTACTACGAAGACCATCAGTGCGAGGTCGGCATGATCGTGGGTAAGGGCTCCTTGCACC 273585629 132431 NM_001127464.2(ZNF469):c.11101G>A (p.Gly3701Ser) ZNF469 - MedGen:C1835677,OMIM:148300 Keratoconus 1 germline 16 88438655 ATGAAGCCCGCCACCCCCAAAGCCAAACCCGGCCCCAGCTCCCAGGGCAGTGGAAGCCCTC 727502866 171814 NM_032122.4(DTNBP1):c.177G>A (p.Trp59Ter) DTNBP1 Dec 11, 2014 MedGen:C2931875,OMIM:203300;MedGen:C3279756,OMIM:614076,Orphanet:ORPHA231531 Hermansky-Pudlak syndrome 1;Hermansky-Pudlak syndrome 7 germline 6 15637789 TTTGCTTTTTTTTAGGTATGAGGATACATGGGCTGCACTTCACAGAAGAGCCAAAGACTGT 886041766 264812 NM_020988.2(GNAO1):c.119G>A (p.Gly40Glu) GNAO1 May 17, 2016 MedGen:CN517202 not provided germline 16 56192574 AGTTTTTCCCCACTGTCTGTGTCCCAACAGGGGCTGGAGAATCAGGAAAAAGCACCATTGT 796052094 200693 NM_004370.5(COL12A1):c.8357G>A (p.Gly2786Asp) COL12A1 May 01, 2014 MedGen:C4225313,OMIM:616471 Bethlem myopathy 2 germline 6 75102655 CTGGTCCTCGTGGAGACATAGGTCCTCCAGGCCCCCAGGGTCCTCCAGGCCCTCAGGGACC 587783782 170053 NM_000252.2(MTM1):c.1354-1G>A MTM1 Feb 08, 2013 MedGen:C0410203,OMIM:310400,Orphanet:ORPHA596,SNOMED CT:46804001 Severe X-linked myotubular myopathy germline X 150660370 TTTCATGCTTTGTTTGCTTGTTTTTGTTTAGTTCCCTACAGCTTTTGAATTCAATGAACAA 199736219 430189 NM_001083961.1(WDR62):c.3514+1G>A WDR62 Feb 22, 2017 MedGen:C1858535,OMIM:604317 Primary autosomal recessive microcephaly 2 germline 19 36103208 AAGAGACCCTGGAGGCCTGGCGCCCACCACGTGAGTGCCCCAGTCCCAGACGGACAGTCCT 121434479 22721 NM_024407.4(NDUFS7):c.434G>A (p.Arg145His) NDUFS7 Apr 01, 2007 MedGen:C1838951 Leigh syndrome due to mitochondrial complex I deficiency germline 19 1391144 TCCAGGTCTACGACCAGATGCCGGAGCCGCGCTACGTGGTCTCCATGGGGAGGTGAGTGCA 587784276 169363 NM_000430.3(PAFAH1B1):c.657G>A (p.Trp219Ter) PAFAH1B1 Feb 08, 2013 MedGen:C1843916,OMIM:607432 Lissencephaly 1 germline 17 2672743 TGCCTCAAGGGATAAAACTATAAAAATGTGGGAAGTGCAAACTGGGTAAGTAAGTTTAGTT 876657400 190156 NM_003042.3(SLC6A1):c.889G>A (p.Gly297Arg) SLC6A1 May 07, 2015 MedGen:C4085238,OMIM:616421 Myoclonic-atonic epilepsy germline 3 11025812 GATGCGGCAACCCAGATCTTCTTCTCATACGGGCTGGGCCTGGGGTCCCTGATCGCTCTCG 111033215 52464 NM_000260.3(MYO7A):c.5648G>A (p.Arg1883Gln) MYO7A Jan 25, 2016 MedGen:C1568247,OMIM:276900,Orphanet:ORPHA231169;MedGen:CN517202 Usher syndrome, type 1;not provided germline 11 77206108 GCCCCTGCTGCCTTTTCAGAAACGGGTCCCGGAAGTACCCTCCGCACCTGGTGGAGGTGGA 1060499566 390674 NM_000059.3(BRCA2):c.-39-1G>A BRCA2 - MedGen:C2675520,OMIM:612555 Breast-ovarian cancer, familial 2 germline 13 32316421 TGTAAGTGCATTTTGGTCTTCTGTTTTGCAGACTTATTTACCAAGCATTGGAGGAATATCG 80338891 34226 NM_003227.3(TFR2):c.2374G>A (p.Gly792Arg) TFR2 Nov 24, 2015 MedGen:C1858664,OMIM:604250,Orphanet:ORPHA225123;MedGen:CN517202 Hemochromatosis type 3;not provided germline 7 100620889 ACGCTGCAAGGGGCAGCCAATGCGCTTAGCGGGGATGTCTGGAACATTGATAACAACTTCT 138350727 76663 NM_130837.2(OPA1):c.740G>A (p.Arg247His) OPA1 Jul 20, 2010 MedGen:C0338508,OMIM:165500,Orphanet:ORPHA98672,SNOMED CT:2065009 Dominant hereditary optic atrophy not provided 3 193626153 AACAAATTCAAGAGCATGAAGAGGAAGCGCGCAGAGCCGCTGGCCAATATAGCACGAGCTA -1 431919 NM_016628.4(WAC):c.1437+1G>A WAC Sep 22, 2016 MedGen:C4225239,OMIM:616708 Desanto-shinawi syndrome de novo 10 28611923 AGTACTCCTCCTGTTTCATCACAGCCAAAGGTATGTCACCTTTGAGGGACATTCGGAAAAG 201016593 245339 NM_000527.4(LDLR):c.11G>A (p.Trp4Ter) LDLR Dec 16, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11089559 GCCTGGCAGAGGCTGCGAGCATGGGGCCCTGGGGCTGGAAATTGCGCTGGACCGTCGCCTT 397516074 51962 NM_000256.3(MYBPC3):c.772G>A (p.Glu258Lys) MYBPC3 Sep 20, 2017 MedGen:CN230736;MedGen:C1861862,OMIM:115197;Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Cardiovascular phenotype;Familial hypertrophic cardiomyopathy 4;Hypertrophic cardiomyopathy;Primary familial hypertrophic cardiomyopathy;not provided germline 11 47348424 GACTGCTCCAACTTCAATCTCACTGTCCACGGTGAGGGGGCCCTGGTGTCTGTCCTGGGCT 74315459 18099 NM_000487.5(ARSA):c.931G>A (p.Gly311Ser) ARSA Aug 01, 1993 MedGen:C0751278,Orphanet:ORPHA309256 Metachromatic leukodystrophy, late infantile germline 22 50626202 CGGTGTGGAAAGGGAACGACCTACGAGGGCGGTGTCCGAGAGCCTGCCTTGGCCTTCTGGC 121912291 47562 NM_001363.4(DKC1):c.965G>A (p.Arg322Gln) DKC1 May 10, 2012 MedGen:C1148551,OMIM:305000 Dyskeratosis congenita X-linked germline X 154770808 GGGCCAAGATTATGCTTCCAGGTGTTCTTCGATATGAGGACGGCATTGAGGTCAATCAGGA 886041661 264263 NM_203290.3(POLR1C):c.70-1G>A POLR1C May 05, 2016 MedGen:CN517202 not provided germline 6 43517305 CTTCGTGGACAAATTCGTCCCTTTGCTCTAGGTCCATACTACTGACTTTCCCGGTAACTAT 794728334 197650 NM_000138.4(FBN1):c.6388G>A (p.Glu2130Lys) FBN1 Sep 07, 2016 MedGen:CN517202;MedGen:CN169374 not provided;not specified germline 15 48437069 TATTTTTTTTCTCTTGCTTAAGATATGGACGAATGCAAAGAACCCGATGTCTGTAAACATG 876657698 229151 NM_000248.3(MITF):c.722G>A (p.Trp241Ter) MITF Jan 07, 2016 MedGen:C3266898,Orphanet:ORPHA3440,SNOMED CT:47434006 Waardenburg syndrome germline 3 69959284 TCCTCCATTTTCATCGCAGAGACATGCGCTGGAACAAGGGAACCATCTTAAAAGCATCCGT 121908865 21477 NM_000369.2(TSHR):c.326G>A (p.Arg109Gln) TSHR Apr 01, 1997 MedGen:C3493776,OMIM:275200 Hypothyroidism, congenital, nongoitrous, 1 germline 14 81087962 GTGTTCCTTGTAACTTATACAGAGAAATTCGGAATACCAGGAACTTAACTTACATAGACCC -1 440094 NM_025132.3(WDR19):c.3716+1G>A WDR19 Jun 01, 2017 MedGen:C0265275,Orphanet:ORPHA474,SNOMED CT:75049004 Jeune thoracic dystrophy paternal 4 39274959 ATACAAAAAGAAGATCGAGGGAATGGTCAGGTAGGCAGAGATGGCTATTTCTGCTATCTAA 863223410 210225 NM_000020.2(ACVRL1):c.269G>A (p.Cys90Tyr) ACVRL1 Mar 11, 2015 MedGen:CN517202 not provided germline 12 51913306 GCCCCACCGAGTTCGTCAACCACTACTGCTGCGACAGCCACCTCTGCAACCACAACGTGTC 121908349 19959 NM_022124.5(CDH23):c.6604G>A (p.Asp2202Asn) CDH23 Jan 01, 2001 MedGen:C1832394,OMIM:601386 Deafness, autosomal recessive 12 germline 10 71793532 GTCATTGCCAATATCACGGCCATTGACCACGACCTCAACCCAAAGCTAGAGTACCACATTG 137854547 15424 NM_000308.3(CTSA):c.1369G>A (p.Gly457Ser) CTSA Dec 01, 1996 MedGen:CN068414 Galactosialidosis, early infantile germline 20 45898065 AAGTACGGGGACAGCGGGGAGCAGATTGCCGGCTTCGTGAAGGAGTTCTCCCACATCGCCT 57830985 29533 NM_170707.3(LMNA):c.1745G>A (p.Arg582His) LMNA Jan 01, 2001 MedGen:C1720860,OMIM:151660,Orphanet:ORPHA2348;MedGen:CN517202 Familial partial lipodystrophy 2;not provided germline 1 156138534 GCTCGGGGGACCCCGCTGAGTACAACCTGCGCTCGCGCACCGTGCTGTGCGGGACCTGCGG 515726165 132004 NM_021625.4(TRPV4):c.2330G>A (p.Cys777Tyr) TRPV4 Apr 02, 2014 Human Phenotype Ontology:HP:0002652,MedGen:C0410528,SNOMED CT:105986008 Skeletal dysplasia germline 12 109786716 GCTCGGACGGCACTCCTGACCGCAGGTGGTGCTTCAGGTGAGGCTGGGGCAGTGGGGCCAG 120074178 18156 NM_000218.2(KCNQ1):c.569G>A (p.Arg190Gln) KCNQ1 Aug 08, 2017 MedGen:CN230736;MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MeSH:D008133,MedGen:C0023976,SNOMED CT:9651007;MedGen:C0035828,OMIM:192500,Orphanet:ORPHA101016,SNOMED CT:20852007;MedGen:CN517202 Cardiovascular phenotype;Congenital long QT syndrome;Long QT syndrome;Long QT syndrome 1;not provided germline 11 2570719 GCCGCAGCAAGTACGTGGGCCTCTGGGGGCGGCTGCGCTTTGCCCGGAAGCCCATTTCCAT 137854612 24434 NM_198056.2(SCN5A):c.4222G>A (p.Gly1408Arg) SCN5A Aug 23, 2017 MedGen:C1142166,Orphanet:ORPHA130,SNOMED CT:418818005;MedGen:CN029323,OMIM:601144;EFO:EFO_0005137,MedGen:C2748542;MedGen:C1837845,OMIM:608567;MedGen:CN517202 Brugada syndrome;Brugada syndrome 1;Cardiac conduction defect, nonspecific;Sick sinus syndrome 1, autosomal recessive;not provided germline 3 38560170 GTGAAAGTCAACTTTGACAACGTGGGGGCCGGGTACCTGGCCCTTCTGCAGGTGGTAAGTC 121912999 31886 NM_004415.3(DSP):c.8501G>A (p.Arg2834His) DSP Sep 15, 2006 MedGen:C1843896,OMIM:607450 Arrhythmogenic right ventricular cardiomyopathy, type 8 germline 6 7585763 GGTCCCGCTCCGGCTCCCGCTCGGGATCTCGCTCCGGATCTCGCTCCGGGTCCCGCAGTGG 104894347 20064 NM_020638.2(FGF23):c.527G>A (p.Arg176Gln) FGF23 Jun 25, 2015 MedGen:C0342642,OMIM:193100,Orphanet:ORPHA89937,SNOMED CT:237889002;MedGen:CN517202 Autosomal dominant hypophosphatemic rickets;not provided germline 12 4370572 TAATTCACTTCAACACCCCCATACCACGGCGGCACACCCGGAGCGCCGAGGACGACTCGGA 121964926 408803 NM_000131.4(F7):c.1091G>A (p.Arg364Gln) F7 Mar 16, 2017 MedGen:CN517202 not provided germline 13 113118698 CCCTGGAGCTCATGGTCCTCAACGTGCCCCGGCTGATGACCCAGGACTGCCTGCAGCAGTC 387906871 39347 NM_003860.3(BANF1):c.34G>A (p.Ala12Thr) BANF1 May 13, 2011 MedGen:C3151446,OMIM:614008,Orphanet:ORPHA280576 Nestor-Guillermo progeria syndrome germline 11 66003284 ACAACCTCCCAAAAGCACCGAGACTTCGTGGCAGAGCCCATGGGGGAGAAGCCAGTGGGGA 61751403 105220 NM_000350.2(ABCA4):c.4919G>A (p.Arg1640Gln) ABCA4 Feb 23, 2017 Human Phenotype Ontology:HP:0000556,MedGen:C0854723,Orphanet:ORPHA71862,SNOMED CT:314407005;MeSH:C535804,MedGen:C1855465,OMIM:248200;MedGen:CN517202 Retinal dystrophy;Stargardt disease 1;not provided germline;unknown 1 94021339 TTCTCAATGTGGCCCACAACGCCATCTTACGGGCCAGCCTGCCTAAGGACAGGAGCCCCGA 121912850 32496 NM_000094.3(COL7A1):c.6227G>A (p.Gly2076Asp) COL7A1 Nov 01, 1997 MedGen:C0432322,OMIM:131750,Orphanet:ORPHA231568 Generalized dominant dystrophic epidermolysis bullosa germline 3 48575116 CATTTTCTTGTTTCCTGCAGGGCAGAGATGGCCCTCCTGGACTCCCTGGAACCCCTGGGCC 113994161 21015 NM_003850.2(SUCLA2):c.534+1G>A SUCLA2 May 26, 2009 MedGen:C2749864,OMIM:612073,Orphanet:ORPHA1933 Mitochondrial DNA depletion syndrome 5 (encephalomyopathic with or without methylmalonic aciduria) germline 13 47988540 TTTGCAATAACAATGGAAAGGTCATTTCAAGTGAGTAATTGTAGACATGATACATACGGGA 1085307709 415363 NM_001845.5(COL4A1):c.3715G>A (p.Gly1239Arg) COL4A1 Apr 11, 2017 MedGen:CN517202 not provided germline 13 110170574 CATGCCACGGAGGGGCCCAAAGGAGACCGCGGACCTCAGGGCCAGCCTGGCCTGCCAGGTA 139617694 172183 NM_000527.4(LDLR):c.1359-1G>A LDLR Apr 12, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000;MedGen:C0020443 Familial hypercholesterolemia;Hypercholesterolaemia germline 19 11113534 GCGCTGATGCCCTTCTCTCCTCCTGCCTCAGCACCCAGCTTGACAGAGCCCACGGCGTCTC 121913588 29212 NM_000530.7(MPZ):c.409G>A (p.Gly137Ser) MPZ Oct 31, 2016 MedGen:C0270912,OMIM:118200,Orphanet:ORPHA101082,SNOMED CT:42986003;MedGen:C0751036,Orphanet:ORPHA65753,SNOMED CT:398040009 Charcot-Marie-Tooth disease, demyelinating, type 1b;Charcot-Marie-Tooth disease, type I germline 1 161306747 TGTGACGTCAAAAACCCTCCAGACATAGTGGGCAAGACCTCTCAGGTCACGCTGTATGTCT 199476349 79045 NM_000487.5(ARSA):c.883G>A (p.Gly295Ser) ARSA Aug 09, 2016 MedGen:C0023522,OMIM:250100,Orphanet:ORPHA512,SNOMED CT:396338004;MedGen:CN517202 Metachromatic leukodystrophy;not provided germline;unknown 22 50626250 AGACCTGAGACCATGCGTATGTCCCGAGGCGGCTGCTCCGGTCTCTTGCGGTGTGGAAAGG 752921215 265034 NM_000152.4(GAA):c.2237G>A (p.Trp746Ter) GAA Jun 08, 2016 MedGen:C0017921,OMIM:232300,Orphanet:ORPHA365,SNOMED CT:124462004,SNOMED CT:237967002;MedGen:CN517202 Glycogen storage disease, type II;not provided germline 17 80117015 GCACCTGGACTGTGGACCACCAGCTCCTGTGGGGGGAGGCCCTGCTCATCACCCCAGTGCT 28942079 18734 NM_000527.4(LDLR):c.1291G>A (p.Ala431Thr) LDLR Mar 30, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline;unknown 19 11113382 AGCCTCATCCCCAACCTGAGGAACGTGGTCGCTCTGGACACGGAGGTGGCCAGCAATAGAA 281865168 105554 NM_003322.5(TULP1):c.1495+1G>A TULP1 Sep 26, 2015 MedGen:C3151206,OMIM:613843;MedGen:C1838603,OMIM:600132;MedGen:CN517202 Leber congenital amaurosis 15;Retinitis pigmentosa 14;not provided germline 6 35499980 AGAACTTCCAGATTGTCCACGCTGATGACCGTGAGTACCTGAGGGCCCAGGTCTGGCTCTT -1 481268 NM_006416.4(SLC35A1):c.586G>A (p.Glu196Lys) SLC35A1 Feb 01, 2018 MedGen:C1970344,OMIM:603585,Orphanet:ORPHA238459 Congenital disorder of glycosylation type 2F germline 6 87508431 ATGTCTAATTTTCTTTCAGGAGTATATTTTGAAAAAGTTTTAAAGAGTTCAGATACTTCTC 786202083 392724 NM_000251.2(MSH2):c.350G>A (p.Trp117Ter) MSH2 Mar 20, 2017 MedGen:C0009405,Orphanet:ORPHA443090;MedGen:CN517202 Hereditary nonpolyposis colon cancer;not provided germline 2 47408539 CTGGAAATAAGGCATCCAAGGAGAATGATTGGTATTTGGCATATAAGGTAATTATCTTCCT 104886068 35658 NM_000495.4(COL4A5):c.716G>A (p.Gly239Glu) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108578319 AGGGTGAGCAAGGTCTTCAGGGCCCACCTGGGCCACCTGGGCAGATCAGTGAACAGAAAAG 104894635 20146 NM_000199.3(SGSH):c.734G>A (p.Arg245His) SGSH Nov 02, 2017 MedGen:C0086647,OMIM:252900,Orphanet:ORPHA79269,SNOMED CT:41572006;MedGen:C0026706,SNOMED CT:88393000;MedGen:CN517202 Mucopolysaccharidosis, MPS-III-A;Sanfilippo syndrome;not provided germline 17 80213815 ACCTGGCCGCTCAGTACACCACCGTCGGCCGCATGGACCAAGGTGGGCTTGCAGAACCGGG 121909671 31264 NM_004960.3(FUS):c.1562G>A (p.Arg521His) FUS Feb 27, 2009 MedGen:C1842675,OMIM:608030 Amyotrophic lateral sclerosis type 6 germline 16 31191419 TTTTTTGCAGGGGTGAGCACAGACAGGATCGCAGGGAGAGGCCGTATTAATTAGCCTGGCT 759876319 246250 NM_000527.4(LDLR):c.1634G>A (p.Gly545Glu) LDLR Mar 25, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000;MedGen:CN118841 Familial hypercholesterolemia;Familial hypercholesterolemias germline 19 11116141 ACTGGGGAACTCCCGCCAAGATCAAGAAAGGGGGCCTGAATGGTGTGGACATCTACTCGCT 1057516039 353905 NM_003482.3(KMT2D):c.14075+1G>A KMT2D Nov 24, 2014 MedGen:CN030661,OMIM:147920 Kabuki syndrome 1 de novo 12 49029400 ACCCCCTCACAATCAGACTGAGGATGTCAGGTAGGGGCGGGGCCAGAAATGGGGATGAGGA 530318579 186605 NM_014625.3(NPHS2):c.503G>A (p.Arg168His) NPHS2 May 05, 2017 MedGen:C1868672,OMIM:600995,Orphanet:ORPHA656;MedGen:CN517202 Nephrotic syndrome, idiopathic, steroid-resistant;not provided germline;unknown 1 179559710 GCCTGGATACCTACCACAAGGTTGACCTTCGTCTCCAAACTCTGGAGATACCTTTTCATGA 397518465 94304 NM_000833.4(GRIN2A):c.1007+1G>A GRIN2A Jun 03, 2016 MedGen:C1832814,OMIM:245570 Epilepsy, focal, with speech disorder and with or without mental retardation germline 16 9937958 GCCAGAGGTCCCGATGCACACCTTGCACCCGTAAGAAAGGGCTTGTTGTCTCCCAAAGTGG 1085307194 414125 NM_001204.6(BMPR2):c.248-1G>A BMPR2 - MedGen:C0152171,OMIM:178600,SNOMED CT:26174007 Primary pulmonary hypertension germline 2 202467518 TCTCCTTTTTTGTATTCATATTGATTTATAGGATGTTGGTCTCACATTGGAGATCCCCAAG 886039537 260273 NM_000533.4(PLP1):c.191+1G>A PLP1 Jun 09, 2016 MedGen:CN517202 not provided germline X 103785769 CTACCAAGACTATGAGTATCTCATCAATGTGTAAGTACCTGCCCTCCCACACAGACCCATC 104895319 26973 NM_000431.3(MVK):c.928G>A (p.Val310Met) MVK Oct 14, 2016 MedGen:C0398691,OMIM:260920,Orphanet:ORPHA343,SNOMED CT:234538002;MedGen:C1959626,OMIM:610377,Orphanet:ORPHA29;MedGen:CN517202 Hyperimmunoglobulin D with periodic fever;Mevalonic aciduria;not provided germline 12 109595070 ATGAACCAGCACCATCTGAATGCCCTCGGCGTGGGCCACGCCTCTCTGGACCAGCTCTGCC 886037941 248797 NM_021912.4(GABRB3):c.913G>A (p.Ala305Thr) GABRB3 Sep 20, 2016 MedGen:C4310712,OMIM:617113 Epileptic encephalopathy, early infantile, 43 germline 15 26561099 GAGACCTTGCCCAAAATCCCCTATGTCAAAGCCATTGACATGTACCTTATGGGCTGCTTCG 794728613 196480 NM_170707.3(LMNA):c.1401G>A (p.Trp467Ter) LMNA Dec 01, 2015 MedGen:CN517202 not provided germline 1 156136941 TTCCCGGCAGGACCAGTCCATGGGCAATTGGCAGATCAAGCGCCAGAATGGAGATGATCCC 796052036 200082 NM_003060.3(SLC22A5):c.42G>A (p.Trp14Ter) SLC22A5 Oct 14, 2016 MedGen:CN517202 not provided germline 5 132370014 CGACGAGGTGACCGCCTTCCTGGGCGAGTGGGGGCCCTTCCAGCGCCTCATCTTCTTCCTG 121912842 32487 NM_000094.3(COL7A1):c.6017G>A (p.Gly2006Asp) COL7A1 Jul 24, 1998 MedGen:C0432322,OMIM:131750,Orphanet:ORPHA231568 Generalized dominant dystrophic epidermolysis bullosa germline 3 48575502 TCGGCTTTCCTGGAGAACGCGGGCTGAAGGGCGACCGTGGAGACCCTGGCCCTCAGGGGCC 137853099 22687 NM_000449.3(RFX5):c.446G>A (p.Arg149Gln) RFX5 Nov 01, 2002 MedGen:C1859538 Bare lymphocyte syndrome type 2, complementation group E germline 1 151344444 TCAGAGAGATCTTCCCTGACATCAAAGCTCGAAGGCTTGGTGGCCGGGGCCAGTCCAAGTA 121918616 27965 NM_000702.3(ATP1A2):c.1643G>A (p.Arg548His) ATP1A2 Oct 12, 2017 MedGen:C1865323;MedGen:CN517202 Migraine, familial basilar;not provided germline 1 160130283 CCTACATGGAGCTGGGGGGACTTGGGGAGCGTGTGCTGGGTGAGAGGCCAGAAACAGGAGG 189360006 205057 NM_001165928.3(DAG1):c.220G>A (p.Val74Ile) DAG1 Jan 20, 2015 MedGen:C3151184,OMIM:613818,Orphanet:ORPHA280333 Limb-girdle muscular dystrophy-dystroglycanopathy, type C9 germline 3 49510754 GTGGTTGGCATTCCTGATGGCACGGCTGTCGTCGGGCGCTCATTTCGAGTGACCATTCCAA 886041792 264831 NM_001271043.2(NFIX):c.690G>A (p.Trp230Ter) NFIX May 19, 2016 MedGen:CN517202 not provided germline 19 13073465 CCAGGACTGTTTTGTGACTTCCGGGGTCTGGAATGTGACGGAGCTGGTGAGAGTATCACAG 398123228 98482 NM_000169.2(GLA):c.974G>A (p.Gly325Asp) GLA May 30, 2017 Human Phenotype Ontology:HP:0001071,MedGen:C0002986,OMIM:301500,Orphanet:ORPHA324,SNOMED CT:16652001;MedGen:CN517202 Fabry disease;not provided germline X 101398395 ACGTAATTGCCATCAATCAGGACCCCTTGGGCAAGCAAGGGTACCAGCTTAGACAGGTAAA 187152753 485791 NM_005912.2(MC4R):c.757G>A (p.Val253Ile) MC4R Mar 04, 2014 MedGen:C0028754,OMIM:601665,Orphanet:ORPHA71529,SNOMED CT:414916001 Obesity germline 18 60371593 GGAGCGATTACCTTGACCATCCTGATTGGCGTCTTTGTTGTCTGCTGGGCCCCATTCTTCC 794728593 196470 NM_170707.3(LMNA):c.768G>A (p.Val256=) LMNA Oct 10, 2017 EFO:EFO_0000407,Human Phenotype Ontology:HP:0001644,MedGen:C0007193,Orphanet:ORPHA217604,SNOMED CT:195021004;MedGen:CN517202 Primary dilated cardiomyopathy;not provided germline 1 156134933 GGAACTGCGGGCCCAGCATGAGGACCAGGTGGAGCAGTATAAGAAGGAGCTGGAGAAGACT 587779499 106941 NM_000090.3(COL3A1):c.1087G>A (p.Gly363Ser) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188993397 GTTGGACCTGCAGGGTCTCCTGGTTCAAATGGTGCCCCTGGACAAAGAGGAGAACCTGGAC 119480069 20019 NM_022436.2(ABCG5):c.1166G>A (p.Arg389His) ABCG5 Aug 01, 2001 MedGen:C0342907,OMIM:210250,Orphanet:ORPHA2882,SNOMED CT:238104009 Sitosterolemia germline 2 43824071 TGGTGAGAAATAAGCTGGCAGTGATTACGCGTCTCCTTCAGAATCTGATCATGGGTTTGTT 104894490 17562 NM_144599.4(NIPA1):c.316G>A (p.Gly106Arg) NIPA1 Apr 27, 2017 MedGen:C0037773,Orphanet:ORPHA685,SNOMED CT:39912006;MedGen:C1838192,OMIM:600363,Orphanet:ORPHA100988 Hereditary spastic paraplegia;Spastic paraplegia 6 germline;inherited 15 22812252 ACCCCCCTGGGCGCCCTTGGAGTACCGTTCGGGTGAGAGCCAAGATTGTGTTTGGTATTTA 267606699 15319 NM_001159772.1(CANT1):c.899G>A (p.Arg300His) CANT1 Nov 01, 2009 MedGen:C4012146,OMIM:251450 Desbuquois dysplasia 1 germline 17 78993857 ACACGCTGCAGCGCTGGTTCTTCCTGCCGCGCCGCGCCAGCCAGGAGCGCTACAGCGAGAA 886041016 263156 NM_006087.3(TUBB4A):c.1061G>A (p.Cys354Tyr) TUBB4A Jul 05, 2016 MedGen:C2676244,OMIM:612438,Orphanet:ORPHA139441 Leukodystrophy, hypomyelinating, 6 germline 19 6495438 GGATCCCCAACAACGTGAAGACGGCCGTGTGCGACATCCCGCCCCGCGGCCTGAAGATGGC 267607224 20730 NM_002334.3(LRP4):c.1345G>A (p.Asp449Asn) LRP4 May 14, 2010 MedGen:C1859309,OMIM:212780,Orphanet:ORPHA3258 Syndactyly Cenani Lenz type germline 11 46894784 GAGCCTGTGCTGCTGTTCGCCAATCGCATCGACATCCGGCAGGTGCTGCCACACCGCTCTG -1 442157 NM_000435.2(NOTCH3):c.665G>A (p.Cys222Tyr) NOTCH3 Apr 13, 2017 MedGen:CN517202 not provided germline 19 15191974 GCAGGCAGAGTGGCGACCTCACTTACGACTGTGCCTGTCTTCCTGGTGAGTGAGCCCTACT 876657395 190072 NM_199334.3(THRA):c.1207G>A (p.Glu403Lys) THRA May 01, 2015 MedGen:C3280817,OMIM:614450 Hypothyroidism, congenital, nongoitrous, 6 germline 17 40089430 CCCACCGAACTCTTCCCCCCACTCTTCCTCGAGGTCTTTGAGGATCAGGAAGTCTAAAGCC 1057520688 369990 NM_003172.3(SURF1):c.681G>A (p.Trp227Ter) SURF1 May 06, 2015 MedGen:CN517202 not provided germline 9 133352516 CCCTGAGAACAATCCAGAAAGGAACCACTGGCATTATCGAGACCTGGAAGCTATGGCCAGA 150299874 376074 NM_024884.2(L2HGDH):c.256+1G>A L2HGDH May 12, 2015 MedGen:CN517202 not provided germline 14 50302901 TTGGTGTTCTGGAAAAGGAGAAAGATTTAGGTATGTATATAATCAATGTTGTTCTTTGGGC 80356615 23724 NM_000525.3(KCNJ11):c.158G>A (p.Gly53Asp) KCNJ11 Jul 05, 2011 MedGen:C1833102;MedGen:C1833104,OMIM:606176,Orphanet:ORPHA99885 Diabetes mellitus, permanent neonatal, with neurologic features;Permanent neonatal diabetes mellitus germline 11 17387934 ACGTGGCCCACAAGAACATCCGGGAGCAGGGCCGCTTCCTGCAGGACGTGTTCACCACGCT 515726177 136314 NM_000098.2(CPT2):c.452G>A (p.Arg151Gln) CPT2 May 25, 2017 MedGen:C0342790,Orphanet:ORPHA157,SNOMED CT:238002005;MedGen:CN517202 Carnitine palmitoyltransferase II deficiency;not provided germline 1 53210126 CAAAATCTGAGTATAATGACCAGCTCACCCGGGCAACCAACATGACTGTTTCTGCCATCCG 751995154 200340 NM_000018.3(ACADVL):c.1376G>A (p.Arg459Gln) ACADVL Jul 19, 2017 Human Phenotype Ontology:HP:0003198,MedGen:C0026848;Human Phenotype Ontology:HP:0003201,MedGen:C0035410;MedGen:C3887523,OMIM:201475,Orphanet:ORPHA26793,SNOMED CT:237996001,SNOMED CT:237997005;MedGen:CN517202 Myopathy;Rhabdomyolysis;Very long chain acyl-CoA dehydrogenase deficiency;not provided germline;unknown 17 7224011 AGCGTGTGCTCCGAGATCTTCGCATCTTCCGGATCTTTGAGGGGACAAATGACATTCTTCG 1057518208 359851 NM_003816.2(ADAM9):c.196-1G>A ADAM9 Nov 03, 2016 MedGen:CN517202 not provided germline 8 39011657 GTTTTATTCTTTTCCCCTTCTGTGCATTTAGGTATCTTATGTTATTCAGGCTGAAGGAAAA 796053496 203172 NM_000548.4(TSC2):c.3624G>A (p.Trp1208Ter) TSC2 Jun 12, 2014 MedGen:CN517202 not provided germline 16 2081608 TGCTGCCGCCTCCGCAGGGAACACCAGCTGGCTGATGAGCCTGGAGAACCCGCTCAGCCCT 116840758 46879 NM_000168.5(GLI3):c.2431+1G>A GLI3 Sep 13, 2012 MedGen:C0265220,OMIM:146510,Orphanet:ORPHA672,SNOMED CT:56677004 Pallister-Hall syndrome not provided 7 41967595 CCCCTGCGGTCTCTCCTCTCATAGGAAATGGTGAGTTCTACATCAGACCATGCATCTGCTC 104886107 35719 NM_000495.4(COL4A5):c.1199G>A (p.Gly400Glu) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108591091 CTGCAGTTATGGGTCCTCCTGGCCCTCCTGGATTTCCTGGAGAAAGGGGTCAGAAAGGTGA 180177207 186655 NM_000030.2(AGXT):c.346G>A (p.Gly116Arg) AGXT Nov 27, 2014 MedGen:C0268164,OMIM:259900,Orphanet:ORPHA93598,SNOMED CT:65520001 Primary hyperoxaluria, type I germline;unknown 2 240869350 GGCATTTGGGGGCAGCGAGCCGTGGACATCGGGGAGCGCATAGGTAAGGGAGAGGCCCAGG -1 426488 NM_005120.2(MED12):c.473G>A (p.Trp158Ter) MED12 Jun 06, 2017 MedGen:CN517202 not provided germline X 71120090 AATACACAGTGCCTGTGATGCGGGCTGCCTGGCTCATTAAGATGACCTGTGCCTACTATGC 72648337 360259 NM_000088.3(COL1A1):c.1354-12G>A COL1A1 Dec 15, 2016 MedGen:C0023931,OMIM:166200,SNOMED CT:385482004;MedGen:CN517202 Osteogenesis imperfecta type I;not provided germline;unknown 17 50194840 GCCCCTCACCACAGGCCGCCTCCTCCTCTCGGCCCTCTCCAGGGCCCTGTTGGTGTTCAAG -1 434929 NM_000944.4(PPP3CA):c.844G>A (p.Glu282Lys) PPP3CA Jan 22, 2018 MedGen:CN547334,OMIM:617711 EPILEPTIC ENCEPHALOPATHY, INFANTILE OR EARLY CHILDHOOD, 1 germline 4 101083202 AATAACTTGTTATCTATACTCCGAGCCCACGAAGCCCAAGATGCAGGGTGAGCAGTTTTGA 587783858 170014 NM_000252.2(MTM1):c.867+1G>A MTM1 Mar 03, 2017 MedGen:C0410203,OMIM:310400,Orphanet:ORPHA596,SNOMED CT:46804001 Severe X-linked myotubular myopathy germline X 150645872 AGACCCAGCGTAAATGCAGTGGCCAACAAGGTGAGTGGACTTAATGATGTGCTGGACACTT 794728040 196772 NM_000090.3(COL3A1):c.1024G>A (p.Gly342Arg) COL3A1 May 15, 2017 MedGen:CN517202 not provided germline 2 188992914 CAGGGCCCTCCTGGTCCTCCTGGAACTGCCGGATTCCCTGGATCCCCTGGTGCTAAGGTAA 886044526 274909 NM_001849.3(COL6A2):c.1458+1G>A COL6A2 Sep 13, 2016 Human Phenotype Ontology:HP:0003198,MedGen:C0026848 Myopathy germline 21 46121124 CAGGGAGCTCTTGGGGAGCCCGGAAAGCAGGTCAGTGTCAGTGCAGGAGGCCGGTGCCCTC 863225431 214763 NM_004208.3(AIFM1):c.1352G>A (p.Arg451Gln) AIFM1 Aug 01, 2015 Gene:751798,MedGen:C1845095,OMIM:300614,Orphanet:ORPHA139583 Deafness, X-linked 5 germline X 130133409 GCTTCTACGATATAAAGTTGGGAAGGAGGCGGGTAGAGCACCATGATCACGCTGTTGTGAG 1057521137 373669 NM_000520.5(HEXA):c.748G>A (p.Gly250Ser) HEXA Dec 08, 2016 MedGen:CN517202 not provided germline 15 72350575 AAGGAGGTCATTGAATACGCACGGCTCCGGGGTATCCGTGTGCTTGCAGAGTTTGACACTC 121907987 18906 NM_006623.3(PHGDH):c.1468G>A (p.Val490Met) PHGDH Jul 23, 2017 MedGen:C1866174,OMIM:601815 Phosphoglycerate dehydrogenase deficiency germline 1 119743906 CTATTTCCAGGCCTCCTGGCAGAGGCAGGCGTGCGGCTGCTGTCCTACCAGACTTCACTGG 1064794322 407537 NM_003165.3(STXBP1):c.889G>A (p.Ala297Thr) STXBP1 Mar 01, 2017 MedGen:CN517202 not provided germline 9 127668174 CTGTGGATAGCACTGCGCCACAAGCACATCGCAGAGGTGTCCCAGTAAGAGCCCCCTGCCC 28940310 17146 NM_015335.4(MED13L):c.5615G>A (p.Arg1872His) MED13L Dec 09, 2003 MedGen:C1837341,OMIM:608808 Transposition of the great arteries, dextro-looped 1 germline 12 115975287 TTAGGTCACGGAGGAGTAAAGTATCTGCACGTAAAATTGGACTACAGAAGTTATGGGAGTG -1 445176 NM_001376.4(DYNC1H1):c.10348G>A (p.Glu3450Lys) DYNC1H1 Oct 25, 2017 MedGen:CN517202 not provided germline 14 102033419 CTGGAAGCCAGCATCGCCCGCTACAAGGAGGAATACGCCGTCCTGATCTCAGAGGCCCAGG 762814879 197427 NM_000218.2(KCNQ1):c.477+1G>A KCNQ1 Jan 05, 2017 MeSH:D008133,MedGen:C0023976,SNOMED CT:9651007;MedGen:CN517202 Long QT syndrome;not provided germline 11 2528019 GCCCTGGCCACGGGGACTCTCTTCTGGATGGTACGTAGCATCTGAGGGCATGGCTGGATGT 398122952 94249 NM_001942.3(DSG1):c.49-1G>A DSG1 Oct 01, 2013 MedGen:C3809719,OMIM:615508,Orphanet:ORPHA369992 Erythroderma, congenital, with palmoplantar keratoderma, hypotrichosis, and hyper-ige germline 18 31326580 ATAACTAGTGTGATTATCTTATTTTTTACAGGTGGTGGTAGAAGTTAACAGTGAATTCCGA 398124437 102148 NM_130799.2(MEN1):c.912+1G>A MEN1 Apr 04, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline 11 64807010 CGGCCAGACCCACTCACCCTCTACCACAAGGTGGGGGCATCTAAGGAGGGTGCAGAAGGGA 62517166 108407 NM_000277.2(PAH):c.441+1G>A PAH Jul 18, 2016 MedGen:C0031485,OMIM:261600,Orphanet:ORPHA716,SNOMED CT:154735006;MedGen:CN517202 Phenylketonuria;not provided germline;unknown 12 102877461 TATGGAGCGGAACTGGATGCTGACCACCCTGTGAGTCCATGGCCCGTAGGATGAGATTTTT 113994087 33122 NM_004304.4(ALK):c.3824G>A (p.Arg1275Gln) ALK May 31, 2016 Human Phenotype Ontology:HP:0030692,MeSH:D001932,MedGen:C0006118,SNOMED CT:126952004;Human Phenotype Ontology:HP:0100013,MeSH:D001943,MedGen:C1458155,Orphanet:ORPHA180250,SNOMED CT:126926005;Human Phenotype Ontology:HP:0003006,MeSH:D009447,MedGen:C0027819,OMIM:256700;MedGen:C2751681,OMIM:613014 Neoplasm of brain;Neoplasm of the breast;Neuroblastoma;Neuroblastoma 3 somatic;unknown 2 29209798 TGGCCAAGATTGGAGACTTCGGGATGGCCCGAGACATCTACAGGTGAGTAAAGACTGCCTC -1 480597 NM_015312.3(KIAA1109):c.5599G>A (p.Val1867Met) KIAA1109 Jan 11, 2018 MedGen:CN737163,OMIM:617822 ALKURAYA-KUCINSKAS SYNDROME germline 4 122249571 ACTCTTGAAGAGTTGGATGAATTTACTTTTGTGGATGAAACTGATCAGCAAGCTGTTCCAG 886041246 264306 NM_003165.3(STXBP1):c.1217G>A (p.Arg406His) STXBP1 Sep 09, 2016 MedGen:C0393706,Orphanet:ORPHA1934;MedGen:C2677326,OMIM:612164;MedGen:CN517202 Early infantile epileptic encephalopathy;Early infantile epileptic encephalopathy 4;not provided germline 9 127675910 ATGCCAATGTCAGCACTTATGACAAAATCCGCATCATCCTTCTCTACATCTTTTTGAAGAA 201842633 48388 NM_001083614.1(EARS2):c.328G>A (p.Gly110Ser) EARS2 Dec 09, 2017 MedGen:C3554079,OMIM:614924,Orphanet:ORPHA314051;MedGen:CN517202 Combined oxidative phosphorylation deficiency 12;not provided germline 16 23544671 ATCCCGCCTGATGAGAGCCCCCGCCGGGGCGGTCCTGCTGGGCCCTACCAGCAATCTCAGC 879254560 245611 NM_000527.4(LDLR):c.518G>A (p.Cys173Tyr) LDLR Mar 25, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11105424 AGCTGTGGGCCTGCGACAACGACCCCGACTGCGAAGATGGCTCGGATGAGTGGCCGCAGCG 796053008 201498 NM_001165963.1(SCN1A):c.4285G>A (p.Ala1429Thr) SCN1A Jan 28, 2014 MedGen:CN517202 not provided germline 2 165999776 AAAGTAAAACATGCATGTCCTTCTTAATAGGCCACATTCAAAGGATGGATGGATATAATGT 387907352 57810 NM_032415.5(CARD11):c.367G>A (p.Gly123Ser) CARD11 May 01, 2013 MedGen:CN231446,OMIM:616452 B-cell expansion with NFKB and T-cell anergy unknown 7 2944529 ACTGGGTGCCCCCTCTCCACAGTGGAGGAAGGCCACGAGGGCCTCACGCACTTCCTGATGA 143473912 48129 NM_000359.2(TGM1):c.944G>A (p.Arg315His) TGM1 Aug 03, 2017 MedGen:C3536797,OMIM:242300;MedGen:CN517202 Autosomal recessive congenital ichthyosis 1;not provided germline 14 24259744 TGGACCGGCGGGGGATGCCATATGGAGGCCGTGGAGACCCAGTCAATGTCTCCCGGGTCAT 1060502248 397280 NM_000093.4(COL5A1):c.2430+1G>A COL5A1 Oct 03, 2016 MedGen:C0268335,OMIM:130000,Orphanet:ORPHA287,SNOMED CT:20766005,SNOMED CT:83470009 Ehlers-Danlos syndrome, classic type germline 9 134780147 CGTGGTCTGAAGGGCACAAAGGGCGAGAAGGTAAGTCTCTCCTTGCAGCCACGGGGCCCCC 104886312 35751 NM_000495.4(COL4A5):c.1423+1G>A COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108591645 AAGGACTCCAAGGAGAACAAGGAGTGAAAGGTTTGATCTCCAAACATATTCATTCCTTCAT 80338737 22341 NM_001482.2(GATM):c.446G>A (p.Trp149Ter) GATM Aug 18, 2011 MedGen:C2675179,OMIM:612718,Orphanet:ORPHA35704 Arginine:glycine amidinotransferase deficiency germline 15 45369364 TGACAGTAAGGAGGCCTGACCCCATTGACTGGTCATTGAAGTATAAAACTCCTGATTTTGA 587777030 75616 NM_024339.4(THOC6):c.136G>A (p.Gly46Arg) THOC6 Apr 26, 2013 Gene:100529147,MedGen:C3150939,OMIM:613680,Orphanet:ORPHA363444 Beaulieu-Boycott-Innes syndrome germline 16 3025804 GGGAAGTTTCTGGCGGCTGGCAACAATTACGGGCAGATTGCCATCTTCAGGTACCCTCTGC 104886061 35633 NM_000495.4(COL4A5):c.584G>A (p.Gly195Asp) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108575947 CTGGTCCCACTGGTATACCAGGGCCAATTGGTCCCCCAGGACCACCAGGTTTGATGGTAAG 121912718 32952 NM_000039.2(APOA1):c.478G>A (p.Glu160Lys) APOA1 Aug 25, 1984 na APOLIPOPROTEIN A-I (NORWAY) germline 11 116836134 CTCCAAGAGGGCGCGCGCCAGAAGCTGCACGAGCTGCAAGAGAAGCTGAGCCCACTGGGCG 936192871 458934 NM_000050.4(ASS1):c.370G>A (p.Asp124Asn) ASS1 Sep 22, 2016 MedGen:C0175683,OMIM:215700,Orphanet:ORPHA187 Citrullinemia type I germline 9 130464117 ACAGCCCTCTGTTCTGCATTGCAGGGGAACGATCAGGTCCGGTTTGAGCTCAGCTGCTACT 772578415 368341 NM_003060.3(SLC22A5):c.77G>A (p.Ser26Asn) SLC22A5 Mar 07, 2015 MedGen:CN517202 not provided germline 5 132370049 CCTTCCAGCGCCTCATCTTCTTCCTGCTCAGCGCCAGCATCATCCCCAATGGCTTCACCGG 199882533 143162 NM_015072.4(TTLL5):c.1627G>A (p.Glu543Lys) TTLL5 May 01, 2014 MedGen:C4014501,OMIM:615860 Cone-rod dystrophy 19 germline 14 75764691 TCAAAGGCCAAGCTGCATGCTGCACTTTACGAGAGGAAGCTCCTGTCTCTGGAGGTGCGAA 148622862 21165 NM_001029.4(RPS26):c.3+1G>A RPS26 Feb 12, 2010 MedGen:C2750080,OMIM:613309 Diamond-Blackfan anemia 10 germline 12 56042170 CTCCTCTCTCCGGTCCGTGCCTCCAAGATGGTGAGTCTTCTTGCGTGGTGAGGGTGGGGGT 1060501350 404136 NM_000214.2(JAG1):c.2688G>A (p.Trp896Ter) JAG1 Sep 01, 2016 MedGen:C1956125,OMIM:118450 Alagille syndrome 1 germline 20 10641688 GCTGCCAGCTTCTGTTTTTCTCCAGGTCTGGTGTGGCCCTCGACCTTGCCTGCTCCACAAA 121917855 23908 NM_002181.3(IHH):c.298G>A (p.Asp100Asn) IHH Sep 01, 2009 Human Phenotype Ontology:HP:0009371,MedGen:C1862151,OMIM:112500,Orphanet:ORPHA93388 Type A1 brachydactyly germline 2 219060170 ATCTTCAAGGACGAGGAGAACACAGGCGCCGACCGCCTCATGACCCAGGTGAGCGCGATCC 104886138 35779 NM_000495.4(COL4A5):c.1718G>A (p.Gly573Asp) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108597507 TGGGTTCCCCTGGAGCTCCAGGGCTTCCTGGTTTACCTGGCACTCCTGGACAGGATGGATT 533055438 200335 NM_000018.3(ACADVL):c.1316G>A (p.Gly439Asp) ACADVL Jul 17, 2017 MedGen:CN517202 not provided germline 17 7223859 TGACAGATGAATGCATCCAAATCATGGGGGGTATGGGCTTCATGAAGGTACAGGACGGTCT -1 446836 NM_004218.3(RAB11B):c.64G>A (p.Val22Met) RAB11B Dec 15, 2017 MedGen:CN698604,OMIM:617807 NEURODEVELOPMENTAL DISORDER WITH ATAXIC GAIT, ABSENT SPEECH, AND DECREASED CORTICAL WHITE MATTER germline 19 8399886 CGCCCAGTGGTGCTCATCGGGGACTCAGGCGTGGGCAAGAGCAACCTGCTGTCGCGCTTCA 80338724 34361 NM_014251.2(SLC25A13):c.1592G>A (p.Gly531Asp) SLC25A13 Jan 05, 2012 MedGen:C1853942,OMIM:605814,Orphanet:ORPHA247598 Neonatal intrahepatic cholestasis caused by citrin deficiency not provided 7 96121997 GACTGAGATGGTGTTGTGTCTCTCCTGCAGGTATGCCTGCAGCATCTTTAGTGACCCCTGC 121908130 19474 NM_003978.4(PSTPIP1):c.688G>A (p.Ala230Thr) PSTPIP1 Jan 31, 2017 MedGen:C1858361,OMIM:604416,Orphanet:ORPHA69126;MedGen:CN517202 Pyogenic arthritis, pyoderma gangrenosum and acne;not provided germline 15 77031225 GAGTTTGACCGGCTGACCATTCTCCGCAACGCCCTGTGGGTGCACAGCAACCAGCTCTCCA 879254171 244617 NM_000051.3(ATM):c.5414G>A (p.Trp1805Ter) ATM Dec 18, 2015 MedGen:CN517202 not provided germline 11 108302947 GGATTCCTCTAAGTGAAAATCATGACATTTGGATAAAGACACTGACTTGTGCTTTTTTGGA 199472936 78175 NM_000238.3(KCNH2):c.1801G>A (p.Gly601Ser) KCNH2 Feb 18, 2017 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MeSH:D008133,MedGen:C0023976,SNOMED CT:9651007;MedGen:C3150943,OMIM:613688 Congenital long QT syndrome;Long QT syndrome;Long QT syndrome 2 germline 7 150951592 GACCAGATAGGCAAACCCTACAACAGCAGCGGCCTGGGCGGCCCCTCCATCAAGGACAAGT 281865137 49430 NM_000399.4(EGR2):c.1142G>A (p.Arg381His) EGR2 Oct 18, 2012 MedGen:C1843247,OMIM:607678,Orphanet:ORPHA101084 Charcot-Marie-Tooth disease, demyelinating, type 1d not provided 10 62813496 AGTGTCGGATCTGCATGCGCAACTTCAGCCGCAGTGACCACCTCACCACCCATATCCGCAC 398122402 94407 NM_002052.4(GATA4):c.661G>A (p.Gly221Arg) GATA4 Dec 16, 2013 MedGen:C3809858,OMIM:615542 Testicular anomalies with or without congenital heart disease germline 8 11748963 TTCTCAGAAGGCAGAGAGTGTGTCAACTGTGGGGCTATGTCCACCCCGCTCTGGAGGCGAG 875989819 200691 NM_004370.5(COL12A1):c.7840+1G>A COL12A1 May 01, 2014 MedGen:C4225314,OMIM:616470 Ullrich congenital muscular dystrophy 2 germline 6 75113601 ACAAACCACAAGTTGGAGTGATTGCAGATCGTAAGAATTTTTATCTTAAGGCACATGCATA 60310264 29541 NM_170707.3(LMNA):c.433G>A (p.Glu145Lys) LMNA Jan 08, 2015 MedGen:C4016241;MedGen:C0033300,OMIM:176670,Orphanet:ORPHA740,SNOMED CT:238870004;MedGen:CN517202 Hutchinson-Gilford progeria syndrome, atypical;Hutchinson-Gilford syndrome;not provided germline 1 156130693 AAGGACCTGGAGGCTCTGCTGAACTCCAAGGAGGCCGCACTGAGCACTGCTCTCAGTGAGA 774048743 213819 NM_000070.2(CAPN3):c.133G>A (p.Ala45Thr) CAPN3 Feb 04, 2014 MedGen:C1869123,OMIM:253600,Orphanet:ORPHA267 Limb-girdle muscular dystrophy, type 2A germline 15 42359938 GGGGGTGGAAACCCAAGTGGCATCTATTCAGCCATCATCAGCCGCAATTTTCCTATTATCG 398123289 98631 NM_000276.3(OCRL):c.2582-1G>A OCRL Nov 01, 2012 MedGen:C1845167,OMIM:300555,Orphanet:ORPHA93623;MedGen:C0028860,OMIM:309000,Orphanet:ORPHA534,SNOMED CT:79385002 Dent disease 2;Lowe syndrome germline X 129590145 AGTTTCCGCTTGTCTTTCTCTCGTCTTGTAGCTACTCTCTTCACTAGTCTTCTCCTGAGGC 74315374 20997 NM_006996.2(SLC19A2):c.750G>A (p.Trp250Ter) SLC19A2 Jul 01, 1999 MedGen:C0342287,OMIM:249270,Orphanet:ORPHA49827,SNOMED CT:237617006 Megaloblastic anemia, thiamine-responsive, with diabetes mellitus and sensorineural deafness germline 1 169477212 CACCCCAGCTTCTAACCACCTTCCTGGCTGGGAGGACATTGAGTCAAAAATCCCTCTAAAT -1 472610 NM_000465.3(BARD1):c.653G>A (p.Trp218Ter) BARD1 Mar 11, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 2 214781221 AGAAAACTTTAGCTGAAATCAACCAAAAATGGAATTTAGAGGCAGAAAAAGAAGATGGTGA 188343279 39134 NR_023343.1(RNU4ATAC):n.51G>A RNU4ATAC Apr 28, 2017 MedGen:C1859452,OMIM:210710,SNOMED CT:254102008;Gene:57788,MedGen:C1846059,OMIM:616651,Orphanet:ORPHA353298 Osteodysplastic primordial dwarfism, type 1;Roifman syndrome not provided 2 121530930 TGCGCTACTGTCCAATGAGCGCATAGTGAGGGCAGTACTGCTAACGCCTGAACAACACACC 137852560 24906 NM_006950.3(SYN1):c.1067G>A (p.Trp356Ter) SYN1 Mar 01, 2004 MedGen:C1845343,OMIM:300491,Orphanet:ORPHA85294 Epilepsy, X-linked, with variable learning disabilities and behavior disorders germline X 47576222 CCACCCTTTGTCTTGGCAGATACAAGCTGTGGGTGGACACGTGCTCAGAGATTTTTGGGGG 1114167292 243980 NM_014687.3(RUBCN):c.319G>A (p.Glu107Lys) RUBCN Jan 10, 2016 Human Phenotype Ontology:HP:0006808,MedGen:C2677328;Human Phenotype Ontology:HP:0002987,MedGen:C0409338;Human Phenotype Ontology:HP:0001263,MedGen:C4020875;Human Phenotype Ontology:HP:0001249,MedGen:C1843367;Human Phenotype Ontology:HP:0006380,MedGen:C0409355;Human Phenotype Ontology:HP:0001252,MedGen:C0026827;Human Phenotype Ontology:HP:0000639,MedGen:C0028738 Cerebral hypomyelination;Elbow flexion contracture;Global developmental delay;Intellectual disability;Knee flexion contracture;Muscular hypotonia;Nystagmus inherited 3 197704686 CCCTTTGCTTCCCAGTTCATCAGCGTGCACGAGAACGACCAGAGCAGTGCTGATGGTGCCA 121434523 20740 NM_005977.3(RNF6):c.724G>A (p.Ala242Thr) RNF6 Aug 01, 2002 MedGen:C4016881 Esophageal squamous cell carcinoma, somatic somatic 13 26215158 TTGGGAAGGTTAAGAAATGGAATTGGGGGAGCAGCTGGCATTCCTCGAGCTAACGCTTCAC 267608656 165876 NM_003159.2(CDKL5):c.2376+1G>A CDKL5 Mar 13, 2014 MedGen:C1839333,OMIM:300672;MedGen:CN517202 Early infantile epileptic encephalopathy 2;not provided unknown X 18619967 ATGAAAAAGAAAAAGAAGAAATCTCAAACAGTAAGTAGATGACCAGTTTCTATATATAATA 74315371 27825 NM_003000.2(SDHB):c.302G>A (p.Cys101Tyr) SDHB May 09, 2002 Human Phenotype Ontology:HP:0002666,MedGen:C0031511,OMIM:171300 Pheochromocytoma germline 1 17028721 GTGTGTCTCTTTCAGGCATCTGTGGCTCTTGTGCAATGAACATCAATGGAGGCAACACTCT 398123901 100426 NM_004006.2(DMD):c.2622+1G>A DMD - MedGen:C3668940,OMIM:302045 Dilated cardiomyopathy 3B germline X 32491276 GCAATTAAAAGTCAGTTAAAAATTTGTAAGGTAAGAATCTCTTCTCCTTCCATTTGGAGCA 199473305 78859 NM_198056.2(SCN5A):c.5227G>A (p.Gly1743Arg) SCN5A Apr 24, 2017 MedGen:C1142166,Orphanet:ORPHA130,SNOMED CT:418818005;MedGen:CN517202 Brugada syndrome;not provided germline 3 38551145 CCCAACAGCAATGGCTCTCGGGGGGACTGCGGGAGCCCAGCCGTGGGCATCCTCTTCTTCA 869312427 223900 NM_000169.2(GLA):c.805G>A (p.Val269Met) GLA Jul 04, 2016 Human Phenotype Ontology:HP:0001071,MedGen:C0002986,OMIM:301500,Orphanet:ORPHA324,SNOMED CT:16652001 Fabry disease germline X 101398564 TTTGAATTATTTCATTCTTTTTCTCAGTTAGTGATTGGCAACTTTGGCCTCAGCTGGAATC 267606961 19035 NM_001243766.1(POMGNT1):c.1425G>A (p.Trp475Ter) POMGNT1 Oct 01, 2007 na Congenital muscular dystrophy-dystroglycanopathy with brain and eye anomalies, type A3 germline 1 46192212 CGTGGTCCATGTCTGCCAGCTCTGGGATTGGGACATGTGGATGCGGATGCCTGAACAACGC 587779469 106907 NM_000090.3(COL3A1):c.3239G>A (p.Gly1080Asp) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189006974 CTGGCCCTGCTGGTGCTCCCGGTCCTGCTGGTTCCCGAGGTGCTCCTGTAAGTTTTGTCAT 121434309 16868 NM_005767.5(LPAR6):c.565G>A (p.Glu189Lys) LPAR6 Jun 01, 2008 MedGen:C1848435,OMIM:278150 Hypotrichosis 8 germline 13 48411859 ACATATCTCTCAAGGATTGTAATTTTCATCGAAATAGTGGGATTTTTTATTCCTCTAATTT 104886132 35790 NM_000495.4(COL4A5):c.1783G>A (p.Gly595Arg) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108598705 TTCTGTATTAAACTTTTCCCTTTTTAGGGTGGAATTACTTTTAAGGGTGAAAGAGGTCCCC 104893808 27865 NM_003106.3(SOX2):c.571G>A (p.Ala191Thr) SOX2 Sep 01, 2006 MedGen:C1859774 Optic nerve hypoplasia and abnormalities of the central nervous system germline 3 181712931 CCGCAGCACCCGGGCCTCAATGCGCACGGCGCAGCGCAGATGCAGCCCATGCACCGCTACG 57758262 18040 NM_000226.3(KRT9):c.488G>A (p.Arg163Gln) KRT9 Jul 30, 2003 Human Phenotype Ontology:HP:0007559,MedGen:C1721006,OMIM:144200,Orphanet:ORPHA2199;MedGen:CN517202 Epidermolytic palmoplantar keratoderma;not provided germline 17 41571505 AGAAGAGCACCATGCAGGAACTCAATTCTCGGCTGGCCTCTTACTTGGATAAGGTGCAGGC 794728249 197646 NM_000138.4(FBN1):c.6418G>A (p.Gly2140Arg) FBN1 Jul 02, 2014 MedGen:CN517202 not provided germline 15 48437039 GAATGCAAAGAACCCGATGTCTGTAAACATGGACAGTGCATCAATACAGATGGTTCCTATC -1 430797 NM_005676.4(RBM10):c.1249-1G>A RBM10 Jun 24, 2016 MedGen:C1839463,OMIM:311900,Orphanet:ORPHA2886 TARP syndrome germline X 47181214 TTCTAATGAACCCCTCCCACCTGCCCTTCAGGCCTCCCAAGGTGGGGAGGGTACCTGGGCC 386134131 51219 NM_000096.3(CP):c.2675G>A (p.Gly892Glu) CP Apr 18, 2013 MedGen:C0878682,OMIM:604290,Orphanet:ORPHA48818,SNOMED CT:124224004 Deficiency of ferroxidase not provided 3 149178618 ATTTTTCTTGTTTCCAGGACCTCTACAGTGGATTAATTGGCCCCCTGATTGTTTGTCGAAG -1 466407 NM_000267.3(NF1):c.479+1G>A NF1 Feb 06, 2017 MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003 Neurofibromatosis, type 1 germline 17 31163377 CAATGCAGTCTTTAGTCGCATTTCTACCAGGTTAGTGTGTAAATCCACATGGGACTACTGA -1 485770 NM_001042492.2(NF1):c.2251+1G>A NF1 Oct 26, 2014 MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003 Neurofibromatosis, type 1 germline 17 31226685 TTGCCTCTGTCAGCAATATGATGTCAACAGGTAAATGTGAATAGTGGTTTTTTTTACTCAG 794727285 192447 NM_001199397.1(NEK1):c.117+1G>A NEK1 Apr 02, 2015 MedGen:C0024507,OMIM:263520,SNOMED CT:72922008 Short rib-polydactyly syndrome, Majewski type germline 4 169602513 TATGTTATCAAGGAAATTAACATCTCAAGAGTAAGTATATTTTTAGTTTGGTTTCATGAGT 66521141 103010 NM_000531.5(OTC):c.154G>A (p.Glu52Lys) OTC - MedGen:CN517202 not provided unknown X 38367367 CTTCTCACTCTAAAAAACTTTACCGGAGAAGAAATTAAATATATGCTATGGCTATCAGCAG 587776617 20194 NM_020632.2(ATP6V0A4):c.418-1G>A ATP6V0A4 Sep 01, 2000 MedGen:C1864498,OMIM:602722,Orphanet:ORPHA402041 Renal tubular acidosis, distal, autosomal recessive germline 7 138762435 TAAATGAAAATCATAGTGCTTTGACTTTCAGACGGAAACCAATTTAGCTGATGATTTCTTT -1 461848 NM_000280.4(PAX6):c.3G>A (p.Met1Ile) PAX6 May 25, 2017 MedGen:C0344542,OMIM:106210;Human Phenotype Ontology:HP:0000659,MedGen:C0344559,OMIM:604229,SNOMED CT:204153003 Aniridia 1;Irido-corneo-trabecular dysgenesis germline 11 31806409 AATCCCGCGGCCCCCAGCCAGAGCCAGCATGCAGAACAGTAAGTGCCTCTGGTCTTTCTGG 121913661 29098 NM_007103.3(NDUFV1):c.640G>A (p.Glu214Lys) NDUFV1 Oct 15, 2015 MedGen:C1838979,OMIM:252010;MedGen:CN517202 Mitochondrial complex I deficiency;not provided germline 11 67610510 TACATCTGTGGAGAGGAGACAGCGCTCATCGAGTCCATTGAGGGCAAGCAGGGCAAGCCCC 104894368 29104 NM_000432.3(MYL2):c.64G>A (p.Glu22Lys) MYL2 Oct 07, 2016 Human Phenotype Ontology:HP:0100613,MedGen:C4022012;MedGen:C1834460,OMIM:608758;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Death in early adulthood;Familial hypertrophic cardiomyopathy 10;Primary familial hypertrophic cardiomyopathy;not provided germline;unknown 12 110919133 GGCGCCAACTCCAACGTGTTCTCCATGTTCGAACAGACCCAAATCCAGGAATTTAAGGAGG 766076524 226375 NM_004174.3(SLC9A3):c.1145G>A (p.Arg382Gln) SLC9A3 Oct 06, 2016 MedGen:CN515063,OMIM:616868 Diarrhea 8, secretory sodium, congenital germline 5 483270 TCCTGACGCTGGTCTTCATCTCCGTGTACCGGGCCATCGGTGAGGCGGGGCCGGGTTGCGG -1 426407 NM_006359.2(SLC9A6):c.803+1G>A SLC9A6 Jun 21, 2017 MedGen:CN517202 not provided germline X 136002214 CAATGATGCTGTTGCCATAGTGCTGTCCTCGTAAGTGTTTGTTTTCTTATTATATTCTGAA 121434593 29021 NM_001626.5(AKT2):c.821G>A (p.Arg274His) AKT2 Feb 01, 2009 Human Phenotype Ontology:HP:0005978,MedGen:C0011860,OMIM:125853,Orphanet:ORPHA181376,SNOMED CT:44054006 Diabetes mellitus type 2 germline 19 40237979 AGTACTTGCACTCGCGGGACGTGGTATACCGCGACATCAAGGTTAGTGGCAGGGTGTGCGC 28939070 20619 NM_014112.4(TRPS1):c.2894G>A (p.Arg965His) TRPS1 Jun 27, 2017 MedGen:C0432233,OMIM:190350,SNOMED CT:254091006;MedGen:C0432233,OMIM:190350,SNOMED CT:254091006;MedGen:C1860823,OMIM:190351 Trichorhinophalangeal dysplasia type I;Trichorhinophalangeal dysplasia type I;Trichorhinophalangeal syndrome type 3 germline 8 115415014 AGCAGATTATTAGGAGGAGAACAAGAAAGCGCCTTAACCCAGAGGCACTTCAGGCTGAGCA 730880022 178323 NM_000152.4(GAA):c.1004G>A (p.Gly335Glu) GAA - MedGen:C0017921,OMIM:232300,Orphanet:ORPHA365,SNOMED CT:124462004,SNOMED CT:237967002 Glycogen storage disease, type II germline 17 80108338 GCCCTGCCCTTAGCTGGAGGTCGACAGGTGGGATCCTGGATGTCTACATCTTCCTGGGCCC -1 482250 NM_001193416.2(DDX3X):c.543+5G>A DDX3X Nov 21, 2017 MedGen:CN517202 not provided germline X 41342841 ACAACTGTCCTCCACATATTGAAAGTGTGAGTATTTTTGCTTGACTTTTTAAGACACAGAG 796052634 203777 NM_172107.3(KCNQ2):c.809G>A (p.Trp270Ter) KCNQ2 May 08, 2014 MedGen:CN517202 not provided germline 20 63442413 ACTTTGACACCTACGCGGATGCACTCTGGTGGGGCCTGGTGAGTTGTGGTCATTGTGGTTT 387906266 16985 NM_030957.3(ADAMTS10):c.810+1G>A ADAMTS10 Nov 01, 2004 MedGen:C1869114,OMIM:277600 Weill-Marchesani syndrome 1 germline 19 8600927 GAGCAGTATGTCCTGGCCATCATGAACATTGTAAGTGCCTTCCCCTCCCTGGGCACGCAGC -1 427264 NM_000038.5(APC):c.1779G>A (p.Trp593Ter) APC Sep 03, 2014 MedGen:CN240755 Familial adenomatous polyposis germline 5 112834986 AACCCTCAAAAGCGTATTGAGTGCCTTATGGAATTTGTCAGCACATTGCACTGAGAATAAA 80356671 28426 NM_000207.2(INS):c.287G>A (p.Cys96Tyr) INS Jun 18, 2014 MedGen:C1833104,OMIM:606176,Orphanet:ORPHA99885;MedGen:CN517202 Permanent neonatal diabetes mellitus;not provided germline 11 2159898 TGCAGAAGCGTGGCATTGTGGAACAATGCTGTACCAGCATCTGCTCCCTCTACCAGCTGGA 104886174 35850 NM_000495.4(COL4A5):c.2332G>A (p.Gly778Ser) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108606829 AAAGGAGCACTTGGTCCAAAAGGTGATCGTGGTTTCCCAGGACCTCCGGGTCCTCCAGGAC 121917927 79398 NM_006920.4(SCN1A):c.1178G>A (p.Arg393His) SCN1A Jun 14, 2017 MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002;MedGen:CN517202 Severe myoclonic epilepsy in infancy;not provided de novo;germline;unknown 2 166046969 AATTCTGATATTTTTGTTTGCAGACATTACGTGCTGCTGGGAAAACGTACATGATATTTTT 587776654 22329 NM_001814.5(CTSC):c.890-1G>A CTSC Dec 01, 1999 MedGen:C0030360,OMIM:245000,Orphanet:ORPHA678,SNOMED CT:40158001 Papillon-Lefèvre syndrome germline 11 88294509 AGGGGTAACCATGTGTGTTATTCATCTTCAGGCTGTGAAGGCGGCTTCCCATACCTTATTG 397516464 52806 NM_001001430.2(TNNT2):c.392G>A (p.Arg131Gln) TNNT2 Sep 13, 2017 EFO:EFO_0000407,Human Phenotype Ontology:HP:0001644,MedGen:C0007193,Orphanet:ORPHA217604,SNOMED CT:195021004;MedGen:CN517202 Primary dilated cardiomyopathy;not provided germline 1 201364365 GCTTTGCCTCTTCTCCTTAGGAGAGACGTCGGGCAGAGCGGGCCGAGCAGCAGCGCATCCG 542967227 269616 NM_000128.3(F11):c.1432G>A (p.Gly478Arg) F11 Dec 22, 2015 MedGen:C0015523,OMIM:612416,Orphanet:ORPHA329,SNOMED CT:49762007 Hereditary factor XI deficiency disease germline;unknown 4 186285765 ATCCATGATCAGTATAAAATGGCAGAAAGCGGGTATGATATTGCCTTGTTGAAACTGGAAA 180177317 200641 NM_012203.1(GRHPR):c.735-1G>A GRHPR Apr 21, 2016 MedGen:C0268165,OMIM:260000,Orphanet:ORPHA93599,SNOMED CT:40951006 Primary hyperoxaluria, type II germline;unknown 9 37432007 GGGGTACCCATGTCACCACTGTCATTCCCAGGGGCGACGTCGTAAACCAGGACGACCTGTA 397514753 75583 NM_001077416.2(TMEM231):c.823G>A (p.Val275Ile) TMEM231 Dec 01, 2014 MedGen:C3809352,OMIM:615397;MedGen:C0265215,Orphanet:ORPHA564,SNOMED CT:29076005 Meckel syndrome, type 11;Meckel-Gruber syndrome germline 16 75542602 CATATTGTTGCTGCCTACCAGGAGAGGAACGGTGAGTCACAGGTAGAGCCCATTCAGCCGC 1057516291 357835 NM_000136.2(FANCC):c.339G>A (p.Trp113Ter) FANCC Jul 19, 2017 MedGen:C0015625,Orphanet:ORPHA84,SNOMED CT:30575002;MedGen:C3468041,OMIM:227645;MedGen:C0027672,SNOMED CT:699346009 Fanconi anemia;Fanconi anemia, complementation group C;Hereditary cancer-predisposing syndrome germline;unknown 9 95240655 GAATTCTGGACAATCAAAACTTAACTCCTGGATACAGGTAAGAGAGTAAATCTTGCTCTGC 760915898 270185 NM_025114.3(CEP290):c.4437+1G>A CEP290 Jun 07, 2017 Human Phenotype Ontology:HP:0002335,MedGen:C0431399,Orphanet:ORPHA475,SNOMED CT:253175003,SNOMED CT:716997004;MedGen:C1857821,OMIM:611755;MedGen:C0265215,Orphanet:ORPHA564,SNOMED CT:29076005;MedGen:C0687120,Orphanet:ORPHA655,SNOMED CT:204958008;MedGen:CN517202 Joubert syndrome;Leber congenital amaurosis 10;Meckel-Gruber syndrome;Nephronophthisis;not provided germline 12 88086038 ACACGGGCAACTTGCAAATCACTAGAAGAGGTAATTAGAAGAATTTGCATTTTGATTAGTG 886039373 259818 NM_000806.5(GABRA1):c.641G>A (p.Arg214His) GABRA1 Jan 17, 2017 MedGen:C2749942,OMIM:611136;MedGen:C3810400,OMIM:615744;MedGen:CN517202 Epilepsy, juvenile myoclonic 5;Epileptic encephalopathy, early infantile, 19;not provided de novo;germline 5 161882639 GCTCAGTGGTTGTAGCAGAAGATGGATCACGTCTAAACCAGTATGACCTTCTTGGACAAAC 555449842 402186 NM_000135.2(FANCA):c.1827-1G>A FANCA Nov 29, 2016 MedGen:C0015625,Orphanet:ORPHA84,SNOMED CT:30575002 Fanconi anemia germline 16 89775816 GACTTAATTGTATTGTTTTCCTGTGATCCAGAGCAGATAAAATCCCCCCATCTCTGTACTC 762394978 213853 NM_004006.2(DMD):c.7755G>A (p.Trp2585Ter) DMD Aug 12, 2015 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Duchenne muscular dystrophy germline X 31679492 GAATGAAATGTTAAAGGATTCAACACAATGGCTGGAAGCTAAGGAAGAAGCTGAGCAGGTC 886044246 273956 NM_000532.4(PCCB):c.184-1G>A PCCB Aug 25, 2016 Human Phenotype Ontology:HP:0003353,MedGen:C0268579,OMIM:606054,Orphanet:ORPHA35 Propionic acidemia germline 3 136255855 ACATCACTGAGTGATCTTTGTTCCATTGTAGGGAAAGCTAACAGCCAGGGAGAGGATCAGT 886037634 59835 NM_023110.2(FGFR1):c.1042G>A (p.Gly348Arg) FGFR1 Sep 13, 2016 na;MedGen:CN517202 HYPOGONADOTROPIC HYPOGONADISM 2 WITH ANOSMIA, SUSCEPTIBILITY TO;not provided germline 8 38421836 GAGTATACGTGCTTGGCGGGTAACTCTATCGGACTCTCCCATCACTCTGCATGGTTGACCG 139428292 39421 NM_005105.4(RBM8A):c.-21G>A RBM8A Dec 08, 2016 MedGen:C0175703,OMIM:274000,Orphanet:ORPHA3320,SNOMED CT:85589009;MedGen:CN517202 Radial aplasia-thrombocytopenia syndrome;not provided germline;inherited 1 145927447 CGAGGTACCTAGTGTCTGAGCGGCACAGACGAGATCTCGATCGAAGGCGAGATGGCGGACG 151344503 27210 NM_000500.7(CYP21A2):c.1217G>A (p.Trp406Ter) CYP21A2 May 01, 1993 MedGen:C0852654,OMIM:201910 21-hydroxylase deficiency germline 6 32040766 AGACGGTCTGGGAGAGGCCACATGAGTTCTGGCCTGGTATGTGGGGGGCCGGGGGCCTGCC 147257424 185791 NM_005957.4(MTHFR):c.337G>A (p.Ala113Thr) MTHFR - MedGen:C1856058,OMIM:236250 Homocysteinemia due to MTHFR deficiency germline 1 11801299 TCAGACAAGGAGACCTCCTCCATGATGATCGCCAGCACCGCCGTGAACTACTGTGGCCTGG 121917935 79467 NM_006920.5(SCN1A):c.580G>A (p.Asp194Asn) SCN1A Oct 05, 2017 MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002;MedGen:CN517202 Severe myoclonic epilepsy in infancy;not provided germline;unknown 2 166054660 ACTTTCCTTCGGGATCCATGGAACTGGCTCGATTTCACTGTCATTACATTTGCGTAAGTGC 121912888 32427 NM_001844.4(COL2A1):c.1547G>A (p.Gly516Asp) COL2A1 Apr 30, 2004 MedGen:C0220685,OMIM:200610,Orphanet:ORPHA93296 Achondrogenesis, type II germline 12 47985946 TGGCTCCTTAGGGTGCTCCCGGCAACCGCGGTTTCCCAGGTCAAGATGGTCTGGCAGGTCC 397514493 45893 NM_005340.6(HINT1):c.278G>A (p.Gly93Asp) HINT1 Oct 01, 2012 MedGen:CN074193,OMIM:137200 Neuromyotonia and axonal neuropathy, autosomal recessive germline 5 131159550 AATGTGCTGCTGATCTGGGCCTGAATAAGGGTTATCGAATGGTGGTGAATGAAGGTTCAGA 869312807 226377 NM_004174.3(SLC9A3):c.805G>A (p.Ala269Thr) SLC9A3 Oct 06, 2016 MedGen:CN515063,OMIM:616868 Diarrhea 8, secretory sodium, congenital germline 5 484647 CTGGGGGGCACGCTGGTGGGGGTGGTCTTCGCCTTCCTGCTGTCGCTGGTGACGCGCTTCA 121912434 29794 NM_000454.4(SOD1):c.125G>A (p.Gly42Asp) SOD1 Apr 01, 1995 MedGen:C1862939,OMIM:105400 Amyotrophic lateral sclerosis type 1 germline 21 31663842 TGTGGGGAAGCATTAAAGGACTGACTGAAGGCCTGCATGGATTCCATGTTCATGAGTTTGG 200482683 131950 NM_014625.3(NPHS2):c.868G>A (p.Val290Met) NPHS2 Nov 10, 2016 MedGen:C3496337,Orphanet:ORPHA357502;MedGen:C1868672,OMIM:600995,Orphanet:ORPHA656;na Idiopathic nephrotic syndrome;Nephrotic syndrome, idiopathic, steroid-resistant;Nephrotic syndrome, type 2, susceptibility to germline;unknown 1 179552608 GTGGAGGCTGAAGCGCAAAGACAAGCCAAAGTGCGGGTGAGCACTCCATCCTCCCACCCAG 587782958 165560 NM_000256.3(MYBPC3):c.3190+5G>A MYBPC3 Apr 19, 2017 Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Hypertrophic cardiomyopathy;Primary familial hypertrophic cardiomyopathy;not provided germline 11 47333552 GGCCACGCTGGTGCTGCAGGTTGTTGGTGCGTGGCCAAGGCCTCCTTGAGCCCCCTTGTTT 80338940 32068 NM_004004.5(GJB2):c.-23+1G>A GJB2 May 09, 2017 MedGen:C2673759,OMIM:220290;Human Phenotype Ontology:HP:0000365,MedGen:C0018772;MedGen:CN043648,Orphanet:ORPHA87884;MedGen:CN517202 Deafness, autosomal recessive 1A;Hearing impairment;Nonsyndromic hearing loss and deafness;not provided germline;unknown 13 20192782 CCGGCCCCGCCGCGCTTCCTCCCGACGCAGGTGAGCCCGCCGGCCCCGGACTGCCCGGCCA 150511103 260025 NM_015665.5(AAAS):c.1331+1G>A AAAS Aug 28, 2017 MedGen:C0271742,OMIM:231550,Orphanet:ORPHA869,SNOMED CT:45414006;MedGen:CN517202 Glucocorticoid deficiency with achalasia;not provided germline 12 53308051 AAACAGCCCTGTGTTTGAGCTCCTTCCCTGGTAAGTGCCATGTGGGCCCTTAGGTCTGGAC 777201305 187039 NM_000159.3(GCDH):c.482G>A (p.Arg161Gln) GCDH Feb 09, 2016 MedGen:C0268595,OMIM:231670,Orphanet:ORPHA25,SNOMED CT:360416003,SNOMED CT:76175005 Glutaric aciduria, type 1 germline;unknown 19 12893630 CTATCTATGCCTATGGCAGCGAGGAACAGCGGCAGAAGTACCTGCCCCAGCTGGGTGAGTG 121913273 40609 NM_006218.3(PIK3CA):c.1624G>A (p.Glu542Lys) PIK3CA May 31, 2016 Human Phenotype Ontology:HP:0030078,MeSH:C538231,MedGen:C0152013;MedGen:C0007112;MedGen:C0278701;Human Phenotype Ontology:HP:0011459,MedGen:C0152018,Orphanet:ORPHA70482;MeSH:D015179,MedGen:CN236642;MedGen:C2752042,OMIM:612918,Orphanet:ORPHA140944;Human Phenotype Ontology:HP:0100843,MeSH:D005909,MedGen:C0017636,SNOMED CT:63634009;MedGen:C2239176,OMIM:114550,Orphanet:ORPHA88673,SNOMED CT:187769009,SNOMED CT:25370001;MedGen:C0153574,Orphanet:ORPHA213569;Human Phenotype Ontology:HP:0030692,MeSH:D001932,MedGen:C0006118,SNOMED CT:126952004;Gene:6765,Human Phenotype Ontology:HP:0100615,MedGen:C0919267,OMIM:167000,SNOMED CT:123843001;Human Phenotype Ontology:HP:0100013,MeSH:D001943,MedGen:C1458155,Orphanet:ORPHA180250,SNOMED CT:126926005;Human Phenotype Ontology:HP:0030358,MeSH:D002289,MedGen:C0007131,SNOMED CT:254637007;MeSH:D010051,MedGen:CN236629;MeSH:C538614,MedGen:C1336078;Gene:7864,Human Phenotype Ontology:HP:0030357,MeSH:D055752,MedGen:C0149925,OMIM:182280,Orphanet:ORPHA70573;Human Phenotype Ontology:HP:0030359,MedGen:C0149782;MeSH:C535575,MedGen:C1168401,OMIM:275355,Orphanet:ORPHA67037;Human Phenotype Ontology:HP:0006740,MedGen:C0279680;MeSH:D002583,MedGen:CN236667;MedGen:CN517202 Adenocarcinoma of lung;Adenocarcinoma of prostate;Adenocarcinoma of stomach;Carcinoma of esophagus;Colorectal Neoplasms;Congenital lipomatous overgrowth, vascular malformations, and epidermal nevi;Glioblastoma;Hepatocellular carcinoma;Malignant neoplasm of body of uterus;Neoplasm of brain;Neoplasm of ovary;Neoplasm of the breast;Non-small cell lung cancer;Ovarian Neoplasms;Papillary renal cell carcinoma, sporadic;Small cell lung cancer;Squamous cell carcinoma of lung;Squamous cell carcinoma of the head and neck;Transitional cell carcinoma of the bladder;Uterine cervical neoplasms;not provided somatic 3 179218294 AAAGCAATTTCTACACGAGATCCTCTCTCTGAAATCACTGAGCAGGAGAAAGATTTTCTAT 879253786 244091 NM_003922.3(HERC1):c.2625G>A (p.Trp875Ter) HERC1 Aug 04, 2016 MedGen:C4310766,OMIM:617011,Orphanet:ORPHA457359 Macrocephaly, dysmorphic facies, and psychomotor retardation germline 15 63734745 TTCTCTTTTACCTCAAGGACCTGATAGATGGGAAAGCTTATCTAAAGGACAGGTAGGCCTT 876661151 360939 NM_000834.4(GRIN2B):c.2002G>A (p.Asp668Asn) GRIN2B Oct 11, 2016 Human Phenotype Ontology:HP:0000483,MedGen:C0004106,OMIM:603047,SNOMED CT:82649003;Human Phenotype Ontology:HP:0000750,MedGen:C0454644;MedGen:C4015316,OMIM:616139;Human Phenotype Ontology:HP:0001382,MedGen:C1844820;Human Phenotype Ontology:HP:0100807,MedGen:C1858091;Human Phenotype Ontology:HP:0001270,MedGen:C1854301 Astigmatism;Delayed speech and language development;Epileptic encephalopathy, early infantile, 27;Joint hypermobility;Long fingers;Motor delay germline;unknown 12 13608611 GAATATGTGGACCAGGTTTCTGGCCTGAGCGACAAAAAGGTAAGAGACTCATTTGAAATCT -1 444146 NM_000535.6(PMS2):c.2275+1G>A PMS2 Apr 04, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline 7 5978595 ATGGCTTTGATTTTGTTATCGATGAAAATGGTAAGTTATTAATTAGAACTATAGCGGCTGG 118204442 15745 NM_000512.4(GALNS):c.776G>A (p.Arg259Gln) GALNS May 01, 1998 MedGen:C0086651,OMIM:253000,Orphanet:ORPHA309297,SNOMED CT:7259005 Mucopolysaccharidosis, MPS-IV-A germline 16 88835335 CACCATCCTGCAGGTATGGAGACGCCGTCCGGGAGATTGATGACAGCATTGGGAAGATACT 121434487 23118 NM_000430.3(PAFAH1B1):c.484G>A (p.Gly162Ser) PAFAH1B1 Dec 19, 2014 MedGen:C1843916,OMIM:607432 Lissencephaly 1 de novo;germline 17 2670247 TCTGTACAGGACATTTCATTCGACCACAGCGGCAAGCTTCTGGCTTCCTGTTCTGCAGATA 62637037 26460 NM_022567.2(NYX):c.1049G>A (p.Trp350Ter) NYX Nov 01, 2000 MedGen:C1839601,OMIM:310500;MedGen:CN517202 Congenital stationary night blindness, type 1A;not provided germline X 41474502 GCGACTGCCGTCTGGAGTGGCTGAGGGACTGGATGGAGGGCTCCGGACGTGTCACCGACGT 138761187 205371 NM_032485.5(MCM8):c.1954-1G>A MCM8 Jun 01, 2015 Gene:100302518,MedGen:C2752067,OMIM:612885 Premature ovarian failure 10 germline 20 5985921 TGTTATCTTGGGCCTTTTAATCATGCTTCAGGTGGTTCCTGGAGAAACAATAGATCCCATT -1 439865 NM_004895.4(NLRP3):c.2759G>A (p.Arg920Gln) NLRP3 Nov 28, 2017 MedGen:CN653906,OMIM:617772 DEAFNESS, AUTOSOMAL DOMINANT 34, WITH OR WITHOUT INFLAMMATION germline 1 247444061 CTAATCAGAATCTCACGCACCTTTACCTGCGAGGCAACACTCTCGGAGACAAGGGGATCAA 281865037 46986 NM_024312.4(GNPTAB):c.3435-1G>A GNPTAB May 10, 2012 MedGen:C0086647,OMIM:252900,Orphanet:ORPHA79269,SNOMED CT:41572006 Mucopolysaccharidosis, MPS-III-A not provided 12 101753540 AACTAATAACCCTGGCTCTCTGTTATTTCAGGAAGTTTGTTTGCCTGAATGACAACATTGA 142742242 171070 NM_000312.3(PROC):c.1201G>A (p.Asp401Asn) PROC Jun 01, 2014 MedGen:C2674321,OMIM:176860 Thrombophilia, hereditary, due to protein C deficiency, autosomal dominant germline 2 127428761 CTCGGGGACCGGCAGGATGCCTGCGAGGGCGACAGTGGGGGGCCCATGGTCGCCTCCTTCC 121917972 79416 NM_006920.4(SCN1A):c.2816G>A (p.Gly939Glu) SCN1A Mar 30, 2015 MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002;MedGen:CN517202 Severe myoclonic epilepsy in infancy;not provided germline;unknown 2 166037873 CCTTCCTGATTGTGTTCCGCGTGCTGTGTGGGGAGTGGATAGAGACCATGTGGGACTGTAT 122445111 26784 NM_000489.4(ATRX):c.659G>A (p.Cys220Tyr) ATRX Oct 23, 2000 MedGen:C4016452 Mental retardation-hypotonic facies syndrome, X-linked germline X 77684942 GCCGTGACTCAGATGGAATGGATGAACAATGTAGGTAGGTAATATAGATGAGCTAACATTC 63750639 95465 NM_000249.3(MLH1):c.1998G>A (p.Trp666Ter) MLH1 Sep 05, 2013 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Lynch syndrome germline 3 37048912 GTATTGAATTTCTTTGGACCAGGTGAATTGGGACGAAGAAAAGGAATGTTTTGAAAGCCTC -1 481357 NM_001875.4(CPS1):c.3980G>A (p.Cys1327Tyr) CPS1 Dec 09, 2017 MedGen:C0751753,OMIM:237300,Orphanet:ORPHA147,SNOMED CT:62522004 Congenital hyperammonemia, type I germline 2 210663175 GGTTGAGGGATGCTGACCCCATTCTGAGATGTGAGATGGCTTCCACTGGAGAGGTAACTAG 761765983 422236 NM_000159.3(GCDH):c.892G>A (p.Ala298Thr) GCDH Apr 26, 2017 MedGen:C0268595,OMIM:231670,Orphanet:ORPHA25,SNOMED CT:360416003,SNOMED CT:76175005;MedGen:CN517202 Glutaric aciduria, type 1;not provided germline 19 12896949 GGCTGCCTGAACAACGCCCGGTACGGCATCGCGTGGGGCGTGCTTGGAGCTTCGGAGTTCT 587778818 76837 NM_000784.3(CYP27A1):c.410G>A (p.Arg137Gln) CYP27A1 Aug 01, 2013 MedGen:C0238052,OMIM:213700,Orphanet:ORPHA909,SNOMED CT:63246000 Cholestanol storage disease not provided 2 218809731 GGAACGACATGGAGCTATGGAAGGAGCACCGGGACCAGCACGACCTGACCTATGGGCCGTT 104894086 24034 NM_000349.2(STAR):c.545G>A (p.Arg182His) STAR Aug 09, 2017 MedGen:C0342474,OMIM:201710,Orphanet:ORPHA90790,SNOMED CT:44231009;MedGen:CN517202 Cholesterol monooxygenase (side-chain cleaving) deficiency;not provided germline 8 38146068 CCGAGGCAGCAGGAAACCTGGTGGGGCCCCGTGACTTTGTGAGCGTGCGCTGTGCCAAGCG 767402084 472481 NM_001128425.1(MUTYH):c.36G>A (p.Trp12Ter) MUTYH Aug 29, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 1 45340219 ACCGCTCGTCTCCCGCCTGAGTCGTCTGTGGGTACGCTGGACTTGCGGTCCGTCTCCTGGC 876658367 232176 NM_003000.2(SDHB):c.587G>A (p.Cys196Tyr) SDHB Feb 21, 2017 MedGen:C1708353,Orphanet:ORPHA29072;MedGen:C0027672,SNOMED CT:699346009;MedGen:C1861848,OMIM:115310;MedGen:CN517202 Hereditary Paraganglioma-Pheochromocytoma Syndromes;Hereditary cancer-predisposing syndrome;Paragangliomas 4;not provided germline 1 17024028 GCATTCTCTGTGCCTGCTGTAGCACCAGCTGCCCCAGCTACTGGTGGAACGGAGACAAATA 886041900 264374 NM_033100.3(CDHR1):c.863-1G>A CDHR1 Jan 31, 2017 MedGen:CN517202 not provided germline 10 84205826 GCAGAACTTCAGGGTGCATCTCCCTTGACAGGGAACGATGGAGCCTTTGAAATTAATGAGA 727503567 172959 NM_001256850.1(TTN):c.66398G>A (p.Trp22133Ter) TTN Aug 21, 2014 EFO:EFO_0000407,Human Phenotype Ontology:HP:0001644,MedGen:C0007193,Orphanet:ORPHA217604,SNOMED CT:195021004;MedGen:CN517202 Primary dilated cardiomyopathy;not provided germline 2 178574811 TGGAAATGCGGCAGACTGACAGTACTACCTGGGTTGAGTTAGCAACCACCGTTATACGTAC 587782144 151677 NM_000546.5(TP53):c.473G>A (p.Arg158His) TP53 Aug 31, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0085390,Orphanet:ORPHA524,SNOMED CT:428850001;Gene:553989,MedGen:C1835398,OMIM:151623;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Li-Fraumeni syndrome;Li-Fraumeni syndrome 1;not provided germline;unknown 17 7675139 ATTCCACACCCCCGCCCGGCACCCGCGTCCGCGCCATGGCCATCTACAAGCAGTCACAGCA 1057520566 368627 NM_000094.3(COL7A1):c.4670G>A (p.Gly1557Glu) COL7A1 Apr 28, 2015 MedGen:CN517202 not provided germline 3 48581758 CTAGCACTGATGGTCTTTGTCACCTCCAGGGAGATGTGGGGCCCGCTGGGCCCAGAGGAGC 864309479 170951 NM_030777.3(SLC2A10):c.1411+1G>A (p.Val430_I470del) SLC2A10 Sep 10, 2014 MedGen:C1859726,OMIM:208050,Orphanet:ORPHA3342 Arterial tortuosity syndrome germline 20 46726987 TCATCAGCCTCTCCTTCCTCGATCTCATTGGTGAGTCCTTCCCAGACAAGTCCGTTTTTTT 766256391 395512 NM_001206927.1(DNAH8):c.7866G>A (p.Trp2622Ter) DNAH8 Nov 10, 2016 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244 Ciliary dyskinesia germline 6 38882917 ATGAAATTTTACTTATTATATAGGTGATTGGGAGCACTGGAATAAGAAACTTCAGCCTTAT 730880265 16967 NM_022132.4(MCCC2):c.1574+1G>A MCCC2 Jan 01, 2005 MedGen:C1859499,OMIM:210210 3-methylcrotonyl CoA carboxylase 2 deficiency germline 5 71652755 GGAAGGAAACCCTTACTATTCCAGCGCAAGGTGGGGGCCAGAACATCACTAACTCTCTGAT 121912816 32546 NM_020549.4(CHAT):c.1321G>A (p.Glu441Lys) CHAT Feb 13, 2001 MedGen:C0393929,OMIM:254210,SNOMED CT:230670003 Familial infantile myasthenia germline 10 49648546 GGCCGAGACGGCACCTGCGGTGTGGTGTGCGAACACTCCCCATTCGATGGCATCGTCCTGG 587777763 40291 NM_024110.4(CARD14):c.349+5G>A CARD14 Nov 25, 2014 MedGen:C1864497,OMIM:602723 Psoriasis susceptibility 2 germline 17 80182795 TGATGTTGACTTCAGTAACTTTAGCGGTGAGAGCTCCGACTTTGACGGTTTGGCAGGCACT 121908528 20688 NM_000030.2(AGXT):c.738G>A (p.Trp246Ter) AGXT Nov 27, 2014 MedGen:C0268164,OMIM:259900,Orphanet:ORPHA93598,SNOMED CT:65520001 Primary hyperoxaluria, type I germline 2 240875166 GCCCTTCTCCTTCTACCTGGACATCAAGTGGCTGGCCAACTTCTGGGGCTGTGACGACCAG 137853201 28296 NM_001079.3(ZAP70):c.1394G>A (p.Arg465His) ZAP70 Dec 14, 2012 MedGen:C1849236,OMIM:269840 Severe combined immunodeficiency, atypical germline 2 97737577 AGAACTTTGTGCACCGTGACCTGGCGGCCCGCAACGTCCTGCTGGTTAACCGGCACTACGC 746212325 214307 NM_019892.5(INPP5E):c.907G>A (p.Val303Met) INPP5E Feb 23, 2015 Human Phenotype Ontology:HP:0002335,MedGen:C0431399,Orphanet:ORPHA475,SNOMED CT:253175003,SNOMED CT:716997004 Joubert syndrome unknown 9 136434769 TACTTCCCAGACCGGAACGTGGCACTCTTCGTGGCCACCTGGAACATGCAGGGCCAGAAGG 112728248 400648 NM_000138.4(FBN1):c.5627G>A (p.Cys1876Tyr) FBN1 Jun 02, 2016 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006 Marfan syndrome germline 15 48448812 TTGACACAGTTGGAAGCTTTTATTGCCTTTGCCACACTGGTTTTAAAACAAATGATGACCA 587776873 39200 NM_002775.4(HTRA1):c.883G>A (p.Gly295Arg) HTRA1 Sep 11, 2014 MedGen:C1838577,OMIM:600142,Orphanet:ORPHA199354 Cerebral autosomal recessive arteriopathy with subcortical infarcts and leukoencephalopathy germline 10 122506796 CCGTTTTCCCTTCAAAACACAGTCACCACCGGGATCGTGAGCACCACCCAGCGAGGCGGCA 1131691714 421271 NM_014795.3(ZEB2):c.3067+1G>A ZEB2 May 02, 2017 MedGen:CN517202 not provided germline 2 144396411 CCCTTCTGCGACATAAATACGAACACACAGGTATGAGTGACTTTGCCTAACTGGTTAGAGC 72549410 78547 NM_000335.4(SCN5A):c.1231G>A (p.Val411Met) SCN5A Jun 13, 2017 MedGen:C1142166,Orphanet:ORPHA130,SNOMED CT:418818005;MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MeSH:D008133,MedGen:C0023976,SNOMED CT:9651007;MedGen:C1859062,OMIM:603830;MedGen:CN517202 Brugada syndrome;Congenital long QT syndrome;Long QT syndrome;Long QT syndrome 3;not provided germline 3 38606058 TCCTTCTACCTGGTGAACCTGATCCTGGCCGTGGTCGCAATGGCCTATGAGGAGCAAAACC 1057524843 368349 NM_017651.4(AHI1):c.2609G>A (p.Trp870Ter) AHI1 Feb 07, 2017 MedGen:CN517202 not provided germline 6 135428643 CTGGAAGTGAGGATGGTATAGTGTATGTTTGGAACCCAGAAACAGGTGAATGTTTATTGAA -1 440007 NM_000516.5(GNAS):c.432+1G>A GNAS Dec 20, 2017 MedGen:C0033835,OMIM:612463,Orphanet:ORPHA79445,SNOMED CT:237659007 Pseudopseudohypoparathyroidism de novo;germline 20 58903792 ATGAACGTGCCTGACTTTGACTTCCCTCCCGTAAGCTACACCCCGACTTGTGTGGCCTTAG 730880309 24096 NM_001698.2(AUH):c.895-1G>A AUH Nov 28, 2006 MedGen:C0342727,OMIM:250950,Orphanet:ORPHA67046,SNOMED CT:237950009 3-Methylglutaconic aciduria germline 9 91216107 CTGCTGAAATGGATTATGTTTTTATTCTCAGGTCGATTTAGTAACAGGGTTAGCCATAGAA 121913064 31563 NM_000129.3(F13A1):c.2045G>A (p.Arg682His) F13A1 Aug 15, 1992 Human Phenotype Ontology:HP:0040233,MedGen:C2750514,OMIM:613225 Factor xiii, a subunit, deficiency of germline 6 6151813 GAGTAACAAGACCAATGAAGAAGATGTTCCGGTAAACCTTGGGTTGGGGAGACCGGGCAGG 104893862 23133 NM_153427.2(PITX2):c.185G>A (p.Arg62His) PITX2 Dec 01, 2004 MedGen:C1867155,OMIM:180550,Orphanet:ORPHA91481 Ring dermoid of cornea germline 4 110621231 AGGAGCTGGAGGCCACTTTCCAGAGGAACCGCTACCCGGACATGTCCACACGCGAAGAAAT 875989925 228177 NM_000527.4(LDLR):c.1685G>A (p.Trp562Ter) LDLR Mar 25, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11116192 TCTACTCGCTGGTGACTGAAAACATTCAGTGGCCCAATGGCATCACCCTAGGTATGTTCGC 375681722 216940 NM_001098816.2(TENM4):c.4324G>A (p.Ala1442Thr) TENM4 Oct 15, 2015 MedGen:C4225223,OMIM:616736 Tremor, hereditary essential, 5 germline 11 78702289 ATCTCTGAAAACCACCAGGTGCGCATTGTCGCCGGGAGGCCCATGCACTGCCAGGTCCCTG 1057516504 357644 NM_019098.4(CNGB3):c.1579-1G>A CNGB3 Mar 27, 2017 MedGen:C1849792,OMIM:262300 Achromatopsia 3 unknown 8 86611672 TTCTATAAGAATTATTTTTCTTTTTATATAGGGTTGTGATACACAGATGATTTATGACATG 122460155 26566 NM_000047.2(ARSE):c.1475G>A (p.Cys492Tyr) ARSE Dec 12, 1997 MedGen:C1844853,OMIM:302950,Orphanet:ORPHA79345 Chondrodysplasia punctata 1, X-linked recessive germline X 2935127 CTGTGTTCCAGCCAGAGGGAGCCGGTGCCTGCTATGGAAGAAAGGTCTGCCCGTGCTTTGG -1 442549 NM_198056.2(SCN5A):c.468G>A (p.Trp156Ter) SCN5A May 12, 2017 MedGen:CN029323,OMIM:601144 Brugada syndrome 1 unknown 3 38622414 GTTCATGGCCCAGCACGACCCTCCACCCTGGACCAAGTATGTCGAGTGAGTATCTTCAGGG 121908900 21419 NM_003880.3(WISP3):c.993G>A (p.Trp331Ter) WISP3 Sep 01, 1999 MedGen:C0432215,OMIM:208230,Orphanet:ORPHA1159,SNOMED CT:254065005 Progressive pseudorheumatoid dysplasia germline 6 112069548 TGAGGGGTCATTTAAATGGAAGATGCTGTGGATTACATCTTGTGTGTGTCAGAGAAACTGC 122457137 169925 NM_178151.2(DCX):c.176G>A (p.Arg59His) DCX Feb 08, 2013 Human Phenotype Ontology:HP:0002282,MedGen:C0008519 Heterotopia germline X 111410223 AGAAGAAAGCCAAGAAGGTACGTTTCTACCGCAATGGGGACCGCTACTTCAAGGGGATTGT 45514095 59193 NM_000548.4(TSC2):c.4662+1G>A TSC2 Oct 20, 2015 Human Phenotype Ontology:HP:0012469,MedGen:C3887898;Human Phenotype Ontology:HP:0010864,MedGen:C0036857;MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000 Infantile spasms;Intellectual disability, severe;Tuberous sclerosis syndrome germline;unknown 16 2085323 ATCGCCGTCCTGTATGTTGGAGAAGGCCAGGTGAGGCTGCGGGGCCGGCCTAGGTGCCTGG 78802634 22233 NM_000492.3(CFTR):c.3266G>A (p.Trp1089Ter) CFTR Jun 14, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008;MedGen:CN169374 Cystic fibrosis;not specified germline;unknown 7 117611707 ACAAAGCTCTGAATTTACATACTGCCAACTGGTTCTTGTACCTGTCAACACTGCGCTGGTT 875989878 227916 NM_199436.1(SPAST):c.1149+1G>A SPAST Jun 29, 2017 MedGen:C1866855,OMIM:182601,Orphanet:ORPHA100985 Spastic paraplegia 4, autosomal dominant germline;paternal 2 32128480 ATAAGTGCTGCAAGTTTAACTTCAAAATACGTGAGTGCTCTGTTTCCAATATTGTCGTATT 72558481 103271 NM_000531.5(OTC):c.995G>A (p.Trp332Ter) OTC - MedGen:CN517202 not provided unknown X 38411989 TAGTGTTCCCAGAGGCAGAAAACAGAAAGTGGACAATCATGGTAAGCAAGAAACAAGGAAT 864321699 217248 NM_002052.4(GATA4):c.25G>A (p.Ala9Thr) GATA4 May 15, 2013 MedGen:C0152021,SNOMED CT:13213009 Congenital heart disease unknown 8 11708337 GGGACCATGTATCAGAGCTTGGCCATGGCCGCCAACCACGGGCCGCCCCCCGGTGCCTACG 398122513 24552 NM_138761.3(BAX):c.199G>A (p.Gly67Arg) BAX Apr 15, 1998 Human Phenotype Ontology:HP:0006727,MedGen:C1961099,Orphanet:ORPHA99861,SNOMED CT:277575008 T-cell acute lymphoblastic leukemia somatic 19 48955799 AAGAAGCTGAGCGAGTGTCTCAAGCGCATCGGGGACGAACTGGACAGTAACATGGAGCTGC 137853332 26507 NM_003639.4(IKBKG):c.956G>A (p.Arg319Gln) IKBKG Mar 15, 2013 MedGen:C1970879,OMIM:300636,Orphanet:ORPHA319612 Familial atypical mycobacteriosis, type 1, X-linked germline X 154563602 AGGCGGACTTCCAGGCTGAGAGGCAGGCCCGGGAGAAGCTGGCCGAGAAGAAGGAGCTCCT 104893788 28087 NM_000539.3(RHO):c.341G>A (p.Gly114Asp) RHO May 15, 1994 MedGen:C3151001,OMIM:613731 Retinitis pigmentosa 4 germline 3 129529074 TCTTCGGGCCCACAGGATGCAATTTGGAGGGCTTCTTTGCCACCCTGGGCGGTATGAGCCG 771028960 170944 NM_030777.3(SLC2A10):c.692G>A (p.Arg231Gln) SLC2A10 Apr 01, 2015 MedGen:C1859726,OMIM:208050,Orphanet:ORPHA3342;MedGen:CN118826,Orphanet:ORPHA91387 Arterial tortuosity syndrome;Thoracic aortic aneurysm and aortic dissection germline 20 46725728 TCTTCAGGGCACGCGATAACATGCGAGGCCGGACCACAGTGGGCCTGGGGCTGGTGCTCTT 121913680 28888 NM_000222.2(KIT):c.1747G>A (p.Glu583Lys) KIT Jun 01, 1992 Human Phenotype Ontology:HP:0007443,MedGen:C0080024,OMIM:172800,Orphanet:ORPHA2884,SNOMED CT:6479008 Partial albinism germline 4 54727515 CCAACACAACTTCCTTATGATCACAAATGGGAGTTTCCCAGAAACAGGCTGAGTTTTGGTC 775085213 185667 NM_001010898.3(SLC6A17):c.484G>A (p.Gly162Arg) SLC6A17 Mar 05, 2015 MedGen:C4225395,OMIM:616269,Orphanet:ORPHA457212 Mental retardation, autosomal recessive 48 germline 1 110174012 TTTGTGGGGCTGTATTATAATGTGATCATCGGGTGGAGCATCTTCTATTTCTTCAAGTCCT 387906565 32793 NM_000342.3(SLC4A1):c.-62G>A SLC4A1 Aug 01, 1996 MedGen:C2675212,OMIM:612653 Spherocytosis type 4 germline 17 44262928 CTCAGCCTGTGCCCTCTGCTGCAGGGACCCGCGGTGCGGGTTATGCTGGGGGCTCAGATCA 1064794003 407500 NM_153704.5(TMEM67):c.887G>A (p.Trp296Ter) TMEM67 Sep 01, 2015 MedGen:CN517202 not provided germline 8 93780891 TAACTGTTTATAGGAGACAGAATCTTCCTTGGCTGTTTTATGGAGACCAGTTAGGATTAGC 141554661 208401 NM_004287.4(GOSR2):c.336+1G>A GOSR2 Oct 23, 2017 MedGen:C3279627,OMIM:614018,Orphanet:ORPHA280620;MedGen:C3279627,OMIM:614018,Orphanet:ORPHA280620;MedGen:CN517202 Epilepsy, progressive myoclonic 6;Epilepsy, progressive myoclonic 6;not provided germline 17 46932200 GAGCTTCTGTCTCGAACCTTCACCACTAACGTAAGCCAGGCCCGTGGTGAGGGTCGGCCTG 118192100 24620 m.8363G>A MT-TK Jan 29, 2015 MedGen:CN069290;MedGen:C0023264,OMIM:256000,Orphanet:ORPHA506,SNOMED CT:29570005;MedGen:C0162672,OMIM:545000,Orphanet:ORPHA551 Cardiomyopathy and Deafness;Leigh syndrome;Myoclonus with epilepsy with ragged red fibers germline MT 8363 AGATTAAGAGAACCAACACCTCTTTACAGTGAAATGCCCCAACTAAATACTACCGTATGGC 267607064 16359 NM_001174089.1(SLC4A11):c.2078G>A (p.Gly693Glu) SLC4A11 Jul 01, 2006 MedGen:C2750450,OMIM:613268 Corneal dystrophy, Fuchs endothelial, 4 germline 20 3228952 ACCTCCTGCTCCTCGCCATCATCAACACAGGGCTGTCTCTGTTTGGGCTGCCTTGGATCCA 763542069 203858 NM_000026.3(ADSL):c.1187G>A (p.Arg396His) ADSL Aug 06, 2013 MedGen:CN517202 not provided germline 22 40364361 TCATGGCCATGGTCAAAGCTGGAGGTAGCCGCCAGGTTTGTAACCCCTCATGTTCCTGGAT 886039466 260339 NM_001399.4(EDA):c.707-1G>A EDA Mar 05, 2016 MedGen:CN517202 not provided germline X 70029503 TGCCCTCTGATTGTCCTATCCTATTTTGCAGGTGCTGCTGATAAAGCTGGAACTCGAGAAA 886041404 264683 NM_003482.3(KMT2D):c.15143G>A (p.Arg5048His) KMT2D Oct 11, 2016 MedGen:CN030661,OMIM:147920;MedGen:CN517202 Kabuki syndrome 1;not provided de novo;germline 12 49026823 AGGGTGACGGGGCCACTGATGGGCCTGCCCGTCTGCTGAACCTGGACCTGGACCTGTGGGT 876661167 231831 NM_000834.3(GRIN2B):c.3332G>A (p.Arg1111His) GRIN2B Jan 16, 2017 MedGen:CN517202 not provided germline 12 13563906 AGTTTGACGAGATCGAGCTGGCCTACCGTCGCCGACCGCCCCGCTCCCCTGACCACAAGCG 140989450 445885 NM_000018.3(ACADVL):c.1077+1G>A ACADVL Dec 14, 2015 MedGen:CN517202 not provided germline 17 7222866 GGTACCATGAGAGGCATCATTGCTAAGGCGGTGAGTACCCTGCCCGAGTCCCTAGGTAACC 104894501 27498 NM_001018005.1(TPM1):c.118G>A (p.Glu40Lys) TPM1 Apr 15, 2012 MedGen:C2678476,OMIM:611878 Dilated cardiomyopathy 1Y germline 15 63044030 TCCCTGTACCCCCTGGCCAACTCCCAGCTGGAAGATGAGCTGGTGTCACTGCAAAAGAAAC 587779633 107111 NM_000090.3(COL3A1):c.1384G>A (p.Gly462Ser) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188994760 GCTGGTATTCCAGGTGTTCCAGGAGCTAAAGGCGAAGATGGCAAGGATGGATCACCTGGAG 1057517843 359970 NM_006009.3(TUBA1A):c.641G>A (p.Arg214His) TUBA1A Aug 01, 2017 MedGen:C1969029,OMIM:611603,Orphanet:ORPHA102011;MedGen:CN517202 Lissencephaly 3;not provided de novo;germline 12 49185725 TAGACAATGAGGCCATCTATGACATCTGTCGTAGAAACCTCGATATTGAGCGTCCAACCTA 180177168 200433 NM_000030.2(AGXT):c.122G>A (p.Gly41Glu) AGXT Nov 27, 2014 MedGen:C0268164,OMIM:259900,Orphanet:ORPHA93598,SNOMED CT:65520001 Primary hyperoxaluria, type I germline 2 240868987 CCAACCTGCCTCCTCGCATCATGGCAGCCGGGGGGCTGCAGATGATCGGGTCCATGAGCAA 786203576 184313 NM_004360.4(CDH1):c.60G>A (p.Trp20Ter) CDH1 Oct 04, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 16 68738308 TACCTTTCCCCCACCCCAGGTCTCCTCTTGGCTCTGCCAGGAGCCGGAGCCCTGCCACCCT 6063 31417 NM_021870.2(FGG):c.571G>A (p.Gly191Arg) FGG Dec 30, 2010 MedGen:C4016097 Fibrinogen Milano XII, digenic germline 4 154609725 GACATTGCCAATAAGGGAGCTAAACAGAGCGGGCTTTACTTTATTAAACCTCTGAAAGCTA 121918124 29064 NM_001059.2(TACR3):c.278G>A (p.Gly93Asp) TACR3 Mar 01, 2009 MedGen:C3553844,OMIM:614840;MedGen:CN517202 Hypogonadotropic hypogonadism 11 with or without anosmia;not provided germline 4 103719398 GGCGCATCGCGCTCTGGTCCCTGGCGTATGGTGTGGTGGTGGCAGTGGCAGTTTTGGGAAA 750781027 404681 NM_016532.3(INPP5K):c.67G>A (p.Val23Met) INPP5K Apr 04, 2017 MedGen:CN241833,OMIM:617404 Muscular dystrophy, congenital, with cataracts and intellectual disability germline 17 1513957 TTCCGCAGCATACACGTCGTGACTTGGAACGTGGCTTCGGCAGCGCCCCCTCTAGATCTCA 104895218 27374 NM_001065.3(TNFRSF1A):c.185G>A (p.Cys62Tyr) TNFRSF1A Apr 02, 1999 MedGen:C1275126,OMIM:142680,Orphanet:ORPHA32960,SNOMED CT:403833009 TNF receptor-associated periodic fever syndrome (TRAPS) germline 12 6334099 CTCAAAATAATTCGATTTGCTGTACCAAGTGCCACAAAGGTAGGGGCAAGTGGAAACGGTG 879851088 268513 NM_001385.2(DPYS):c.424-1G>A DPYS Oct 29, 2015 MedGen:C0342803,OMIM:222748,SNOMED CT:238014002 Dihydropyrimidinase deficiency germline 8 104447504 TATTGTTGTTATGGTTGCTGCTTCCTTTTAGGTTAAAGAAGAAATGAAAATCCTTGTGCAA 1057516121 353980 NM_172107.3(KCNQ2):c.1631+1G>A KCNQ2 Mar 31, 2016 MedGen:C1852587,OMIM:121200;MedGen:CN517202 Benign familial neonatal seizures 1;not provided germline 20 63414087 GGGCCTCAAAGTCAGCATCAGAGCCGTGTGGTGAGGCCCCTGCCCAGCCGGGAGCCTGGGG 11575937 29525 NM_170707.3(LMNA):c.1445G>A (p.Arg482Gln) LMNA Mar 09, 2017 MedGen:CN043576;MedGen:C2750035,OMIM:616516,Orphanet:ORPHA98855;MedGen:C1720860,OMIM:151660,Orphanet:ORPHA2348;MedGen:CN236383,Orphanet:ORPHA98301;MedGen:CN221589;MedGen:CN517202 Charcot-Marie-Tooth disease, type 2;Emery-Dreifuss muscular dystrophy 3, autosomal recessive;Familial partial lipodystrophy 2;Laminopathy;Partial lipodystrophy, Dunnigan;not provided de novo;germline 1 156136985 AGAATGGAGATGATCCCTTGCTGACTTACCGGTTCCCACCAAAGTTCACCCTGAAGGCTGG 397516202 52163 NM_000257.3(MYH7):c.4135G>A (p.Ala1379Thr) MYH7 Feb 24, 2017 MedGen:C3495498,OMIM:192600;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Familial hypertrophic cardiomyopathy 1;Primary familial hypertrophic cardiomyopathy;not provided germline 14 23418244 GCCCAGTGGAGGACCAAGTATGAGACGGACGCCATTCAGCGGACTGAGGAGCTCGAGGAGG 794727028 271682 NM_001848.2(COL6A1):c.904G>A (p.Gly302Arg) COL6A1 Apr 18, 2017 MedGen:CN033863,OMIM:254090;MedGen:CN517202 Ullrich congenital muscular dystrophy 1;not provided germline 21 45989752 CCTCTTCCTCTTCTTCCGCTGGGTGTGTAGGGAGAAAAAGGGAGCCGTGGGGAGAAGGTGA 606231441 170974 NM_152296.4(ATP1A3):c.2542+1G>A ATP1A3 May 04, 2014 MedGen:C3553788,OMIM:614820 Alternating hemiplegia of childhood 2 de novo;germline;inherited 19 41970184 GACTCATCAGCATGGCCTACGGGCAGATTGGTGAGGCACCGGGGACTCCATCTCCTTACCA 863224489 213253 NM_000267.3(NF1):c.1713G>A (p.Trp571Ter) NF1 Jun 11, 2015 MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003 Neurofibromatosis, type 1 germline 17 31221921 GAATCCTGATGCTCCTGTAGAAACATTTTGGGAGATTAGGTATATGTACTTTTATTTTTTA 587776652 22280 NM_003001.3(SDHC):c.3G>A (p.Met1Ile) SDHC Jul 01, 2003 MedGen:C1854336,OMIM:605373 Paragangliomas 3 germline 1 161314408 GTCACTTCCGTCCAGACCGGAACCCAAGATGGCTGCGCTGTTGCTGAGGTGACTTCAGTGG 797044553 185693 NM_005215.3(DCC):c.1140+1G>A (p.V329GfsTer15) DCC Jan 06, 2015 MedGen:C1834870,OMIM:157600 Mirror movements 1 germline 18 53063460 GTCATTCCTAGTGATTATTTTCAGATAGTGGTAATTATTTTGTTTCATATTTGTTTTATAA 730880850 179683 NM_000257.3(MYH7):c.732+1G>A MYH7 Jan 18, 2017 MedGen:CN221582;Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569;EFO:EFO_0000407,Human Phenotype Ontology:HP:0001644,MedGen:C0007193,Orphanet:ORPHA217604,SNOMED CT:195021004;MedGen:CN517202 Cardiomyopathy, left ventricular noncompaction;Hypertrophic cardiomyopathy;Primary dilated cardiomyopathy;not provided germline;unknown 14 23431584 ACCGTCCGGAACGACAACTCCTCCCGCTTCGTGAGTGGTCCCTGACCTTGGCCTTGGGACT 397518453 76369 NM_031157.3(HNRNPA1):c.940G>A (p.Asp314Asn) HNRNPA1 Mar 28, 2013 MedGen:C3715156,OMIM:615426 Amyotrophic lateral sclerosis 20 germline 12 54283844 AGCAATTTTGGAGGTGGTGGAAGCTACAATGATTTTGGGAATTACAACAATCAGTCTTCAA 55863639 176641 NM_000546.5(TP53):c.375G>A (p.Thr125=) TP53 Jun 22, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0085390,Orphanet:ORPHA524,SNOMED CT:428850001;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Li-Fraumeni syndrome;not provided germline;unknown 17 7675994 TTCTGGGACAGCCAAGTCTGTGACTTGCACGGTCAGTTGCCCTGAGGGGCTGGCTTCCATG 28940280 17605 NM_006493.2(CLN5):c.835G>A (p.Asp279Asn) CLN5 Jul 01, 1998 MedGen:C1850442,OMIM:256731,Orphanet:ORPHA228360 Ceroid lipofuscinosis neuronal 5 germline 13 77000580 AAGGGGGCAGAGACATGGTTTGATTCCTACGACTGTTCCAAATTTGTGTTAAGGACCTTTA -1 471954 NM_000044.4(AR):c.2495G>A (p.Arg832Gln) AR May 08, 2017 MedGen:C0039585,OMIM:300068,SNOMED CT:12313004 Androgen resistance syndrome germline X 67722872 TGAAAAATCAAAAATTCTTTGATGAACTTCGAATGAACTACATCAAGGAACTCGATCGTAT 879255253 181561 NM_017534.5(MYH2):c.904+1G>A MYH2 May 01, 2010 MedGen:C1854106,OMIM:605637 Inclusion body myopathy 3 germline 17 10542874 TTACATCGAATAAGAAACCAGAACTTATTGGTAAGAAATGTCATAATTCTTTTCCAGAATT 121434640 23827 NM_000107.2(DDB2):c.818G>A (p.Arg273His) DDB2 Dec 10, 1999 MedGen:C1848411,OMIM:278740,SNOMED CT:56048001 Xeroderma pigmentosum, group E germline 11 47234872 TAGATCAAACAGTGAAAATTTGGGACCTGCGCCAGGTTAGAGGGAAAGCCAGCTTCCTCTA 1085307441 414417 NM_001013703.3(EIF2AK4):c.2319+1G>A EIF2AK4 - MedGen:C0340848,OMIM:234810,SNOMED CT:234161007 Familial pulmonary capillary hemangiomatosis germline 15 39978148 GAAGATGAGAACAGTAAAAGTCAGAATCAGGTATATATATGAATAGAAATTATATCATTTT -1 442650 NM_000702.3(ATP1A2):c.1816G>A (p.Ala606Thr) ATP1A2 Aug 02, 2017 MedGen:CN517202 not provided germline 1 160130586 GTGCCAGATGCTGTGGGCAAGTGCCGAAGCGCAGGCATCAAGGTACTGGCCTCCCATCCTC 61751443 153478 NM_004992.3(MECP2):c.917G>A (p.Arg306His) MECP2 Jan 01, 2018 MedGen:C0035372,OMIM:312750,Orphanet:ORPHA778,SNOMED CT:68618008;MedGen:CN517202 Rett syndrome;not provided de novo;germline;maternal;unknown X 154030911 TGCAGGAGACCGTACTCCCCATCAAGAAGCGCAAGACCCGGGAGACGGTCAGCATCGAGGT 137852519 25028 NM_000425.4(L1CAM):c.1792G>A (p.Asp598Asn) L1CAM Jul 01, 1994 MedGen:C0795953,OMIM:303350,Orphanet:ORPHA2466 Spastic paraplegia 1 germline X 153868034 AACTACAGCTGCGTGGCCAGTACCGAACTGGATGTGGTGGAGAGTAGGGCACAGCTCTTGG 397514393 36387 NM_000060.4(BTD):c.929G>A (p.Gly310Glu) BTD Dec 04, 2012 MedGen:C0220754,OMIM:253260,Orphanet:ORPHA79241,SNOMED CT:8808004 Biotinidase deficiency not provided 3 15644785 ATGTCCACCACCCAGTTCTGGGGATGACAGGAAGTGGCATACACACCCCTCTGGAGTCCTT 104893913 31195 NM_001018077.1(NR3C1):c.1430G>A (p.Arg477His) NR3C1 Apr 01, 2006 MedGen:C1841972,OMIM:615962,Orphanet:ORPHA786 Glucocorticoid resistance, generalized germline 5 143310135 AAATTCGAAGAAAAAACTGCCCAGCATGCCGCTATCGAAAATGTCTTCAGGCTGGAATGAA 1131690840 420622 NM_144997.5(FLCN):c.619-1G>A FLCN Jan 16, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 17 17222662 AAAGAGGCCATCCCTTCCCTTTGCATTTCAGGTGTTTGAGGCAGAGCAGTTTGGATGCCCA 104886188 35882 NM_000495.4(COL4A5):c.2597G>A (p.Gly866Glu) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108620346 CAGGACCCCCAGGTGAAAGAGGCAGTCCAGGGATCCCCGGAGCACCTGGTCCTATAGGACC 75996173 28948 NM_020975.4(RET):c.1901G>A (p.Cys634Tyr) RET Apr 11, 2017 MedGen:C0027672,SNOMED CT:699346009;na;Human Phenotype Ontology:HP:0002865,MeSH:C536914,MedGen:C0238462,Orphanet:ORPHA1332,SNOMED CT:255032005;MeSH:D018761,MedGen:C0025267,OMIM:131100,Orphanet:ORPHA652,SNOMED CT:30664006;MedGen:CN073359,Orphanet:ORPHA653,SNOMED CT:61808009;MeSH:D018813,MedGen:C0025268,OMIM:171400,Orphanet:ORPHA247698,SNOMED CT:61808009;MeSH:D018814,MedGen:C0025269,OMIM:162300,Orphanet:ORPHA247709,SNOMED CT:6153000,SNOMED CT:61530001;MedGen:C1970712,OMIM:610755,Orphanet:ORPHA276152;MeSH:D009369,MedGen:C0027651,SNOMED CT:108369006;Human Phenotype Ontology:HP:0002666,MedGen:C0031511,OMIM:171300;MedGen:CN517202;MedGen:CN169374 Hereditary cancer-predisposing syndrome;MEN2A and FMTC;Medullary thyroid carcinoma;Multiple endocrine neoplasia, type 1;Multiple endocrine neoplasia, type 2;Multiple endocrine neoplasia, type 2a;Multiple endocrine neoplasia, type 2b;Multiple endocrine neoplasia, type 4;Neoplasm;Pheochromocytoma;not provided;not specified germline;somatic 10 43114501 CACCCACAGATCCACTGTGCGACGAGCTGTGCCGCACGGTGATCGCAGCCGCTGTCCTCTT -1 433555 NM_000138.4(FBN1):c.3221G>A (p.Cys1074Tyr) FBN1 Jun 02, 2017 MedGen:CN169374 not specified germline 15 48488229 CTTGCTGTTTTTGTGCAGACATTGACGAATGCCGCATATCTCCTGACCTCTGTGGCAGAGG 61752127 143215 NM_001079867.1(PEX2):c.669G>A (p.Trp223Ter) PEX2 Mar 01, 2004 MedGen:C3542026,OMIM:614867 Peroxisome biogenesis disorder 5B germline 8 76983510 CCAGAAGTTGAAAGCCAAGCTGTCTTCATGGTGTATTCCTCTTACTGGTGCACCTAATAGT 1057516085 354023 NM_172107.3(KCNQ2):c.602G>A (p.Arg201His) KCNQ2 Mar 31, 2016 MedGen:C3150986,OMIM:613720,Orphanet:ORPHA439218;MedGen:CN239858 Early infantile epileptic encephalopathy 7;Severe intellectual deficiency de novo;germline 20 63444747 TCTTTGCCACATCTGCGCTCCGGAGCCTGCGCTTCCTGCAGATTCTGCGGATGATCCGCAT 876660079 236527 NM_005359.5(SMAD4):c.297G>A (p.Trp99Ter) SMAD4 Jul 17, 2015 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 18 51048733 ATTTCCTCATGTGATCTATGCCCGTCTCTGGAGGTGGCCTGATCTTCACAAAAATGAACTA 121912566 23603 NM_000901.4(NR3C2):c.1897G>A (p.Gly633Arg) NR3C2 Jun 01, 2003 MedGen:C1449842,OMIM:177735,Orphanet:ORPHA171871 Pseudohypoaldosteronism type 1 autosomal dominant germline 4 148259978 TGCAAAGTTTTCTTCAAAAGAGCAGTGGAAGGTAAATGTTCATGTGGGTGTTCCTTTTACA 398123083 98187 NM_000018.3(ACADVL):c.1406G>A (p.Arg469Gln) ACADVL Feb 25, 2015 MedGen:C3887523,OMIM:201475,Orphanet:ORPHA26793,SNOMED CT:237996001,SNOMED CT:237997005 Very long chain acyl-CoA dehydrogenase deficiency germline;unknown 17 7224041 GGATCTTTGAGGGGACAAATGACATTCTTCGGCTGTTTGTGGCTCTGCAGGGCTGTATGGT 386134136 51338 NM_000096.3(CP):c.607+1G>A CP Apr 18, 2013 MedGen:C0878682,OMIM:604290,Orphanet:ORPHA48818,SNOMED CT:124224004 Deficiency of ferroxidase not provided 3 149210166 TCATCGGACCTTTAATAATCTGTAAAAAAGGTACATCTTCTCCTTATTGCACATGCTATAT 794728805 196744 NM_001035.2(RYR2):c.14465G>A (p.Arg4822His) RYR2 Oct 17, 2014 MedGen:CN517202 not provided germline 1 237819067 GCTATATGTTCCACATGTATGTTGGAGTTCGTGCTGGAGGAGGGATCGGGGATGAAATCGA 766567785 239039 NM_033084.4(FANCD2):c.2444G>A (p.Arg815Gln) FANCD2 Apr 16, 2016 MedGen:C0015625,Orphanet:ORPHA84,SNOMED CT:30575002 Fanconi anemia germline 3 10067267 CACCTGAGATGAAGGGGAAGGTGCTCACTCGGTTAAAGCACATTGTAGAATTGCAAATAAT -1 426112 NM_000138.4(FBN1):c.2669G>A (p.Cys890Tyr) FBN1 Nov 05, 2015 MedGen:CN517202 not provided germline 15 48495131 GTGCTGCGTGGGGAAGCCCGTGCACCCTATGCCAAGTTGGTAAGAGAAACCCATGCTGTGG 371675497 237795 NM_016111.3(TELO2):c.2296G>A (p.Val766Met) TELO2 Jun 17, 2016 MedGen:C4310778,OMIM:616954 You-Hoover-Fong syndrome germline 16 1507605 CTCAGCCCCCGCCTTCTTGCCGGCAGCTACGTGCGCCAGGGGCTGTTGTCGGCCGTCTCCT 201023600 272995 NM_017433.4(MYO3A):c.2506-1G>A MYO3A Jul 08, 2016 MedGen:C1846784,OMIM:607101 Deafness, autosomal recessive 30 germline 10 26147429 TTGTGATAATTATAGCATACTGTATCAACAGGTCCTCTATAATGCAAGTGGATTCTTAGCC 878853228 237622 NM_016239.3(MYO15A):c.8340G>A (p.Thr2780=) MYO15A Feb 16, 2016 MedGen:C1838263,OMIM:600316 Deafness, autosomal recessive 3 germline 17 18155225 GGTCTACTTCTCCCGCATCTTCCCCGCCACGGTGCGAGCCCCTCACTTGCCCCCTACCTGT 137852616 24508 NM_000211.4(ITGB2):c.850G>A (p.Gly284Ser) ITGB2 Jun 14, 2016 MedGen:C0272187 Leukocyte adhesion deficiency germline 21 44900367 AAGCTGGGCGCCATCCTGACCCCCAACGACGGCCGCTGTCACCTGGAGGACAACTTGTACA 199473609 78762 NM_198056.2(SCN5A):c.4217G>A (p.Gly1406Glu) SCN5A May 11, 2014 MedGen:C1142166,Orphanet:ORPHA130,SNOMED CT:418818005;MedGen:CN517202 Brugada syndrome;not provided germline 3 38560175 CCAAGGTGAAAGTCAACTTTGACAACGTGGGGGCCGGGTACCTGGCCCTTCTGCAGGTGGT 199476123 24773 m.3946G>A MT-ND1 Oct 01, 2004 MedGen:C0162671,OMIM:540000,Orphanet:ORPHA550,SNOMED CT:39925003 Juvenile myopathy, encephalopathy, lactic acidosis AND stroke germline MT 3946 GAGTCCGAACTAGTCTCAGGCTTCAACATCGAATACGCCGCAGGCCCCTTCGCCCTATTCT 727504274 175459 NM_000257.3(MYH7):c.3346G>A (p.Glu1116Lys) MYH7 Feb 15, 2014 MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Primary familial hypertrophic cardiomyopathy;not provided germline 14 23420225 GAGCCCTTTGTGTCTGACCAGGCACGCATCGAGGAGCTGGAGGAGGAGCTGGAGGCCGAGC 886039808 260914 NM_025114.3(CEP290):c.4811G>A (p.Trp1604Ter) CEP290 - MedGen:CN199461,Orphanet:ORPHA140874 Joubert Syndrome and Related Disorders germline 12 88083848 GTTCACTAAATAAATTCAAACAAACGGCTTGGGTAAGATTCTAAGAACTTTGTTCCATTCT 387906602 38581 NM_001846.3(COL4A2):c.3455G>A (p.Gly1152Asp) COL4A2 Jan 13, 2012 MedGen:C3280970,OMIM:614483 Porencephaly 2 germline 13 110492070 GCTCAGACTTAATGCTGTGTTCACCCCCAGGCTTTCCAGGGCTGACTGGGCCTCCAGGGTC 1131692041 423404 NM_006013.4(RPL10):c.481G>A (p.Gly161Ser) RPL10 Jul 05, 2017 MedGen:CN298079,OMIM:300998 MENTAL RETARDATION, X-LINKED, SYNDROMIC, 35 germline X 154400615 GCCCTGCGCAGGGCCAAGTTCAAGTTTCCTGGCCGCCAGAAGGTATGTAGTGCTGCAGCCC 199473224 78735 NM_198056.2(SCN5A):c.3988G>A (p.Ala1330Thr) SCN5A Dec 12, 2016 MedGen:CN230736;MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;na;MedGen:CN517202 Cardiovascular phenotype;Congenital long QT syndrome;SCN5A-related disorder;not provided germline;unknown 3 38560404 CTTGAGGTGGTGGTCAATGCCCTGGTGGGCGCCATCCCGTCCATCATGAACGTCCTCCTCG 199476182 47868 NM_207352.3(CYP4V2):c.327+1G>A CYP4V2 Apr 12, 2012 MedGen:C1859486,OMIM:210370,Orphanet:ORPHA41751 Bietti crystalline corneoretinal dystrophy not provided 4 186194613 GTGGCCCTTTATAATGCAGAAAATGTGGAGGTGGGTACATGTGAATATGATCAGTATTGTA 137852907 17933 NM_000419.4(ITGA2B):c.818G>A (p.Gly273Asp) ITGA2B Jan 01, 1994 MedGen:C0040015,OMIM:273800,Orphanet:ORPHA849,SNOMED CT:32942005 Glanzmann thrombasthenia germline 17 44384567 CCTTGTCCTCAGGGTACTCGGTGGCCGTGGGCGAGTTCGACGGGGATCTCAACACTACAGG 199473598 78707 NM_198056.2(SCN5A):c.3691G>A (p.Glu1231Lys) SCN5A Nov 11, 2011 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MedGen:CN517202 Congenital long QT syndrome;not provided germline 3 38566558 CTGCAGGCCTTCGAGGACATCTACCTAGAGGAGCGGAAGACCATCAAGGTTCTGCTTGAGT 140159323 424503 NM_024513.3(FYCO1):c.4271G>A (p.Arg1424Gln) FYCO1 Oct 09, 2015 MedGen:C1864908,OMIM:610019 Cataract, autosomal recessive congenital 2 paternal 3 45923746 TTCCCTCCCAGGTCCTCATTCCCACGACCCGATGCAACTCCCACAAGGAGAACATCCAGGG 398122923 48487 NM_001142339.2(GNAL):c.409G>A (p.Val137Met) GNAL Jan 01, 2013 MedGen:C3554447,OMIM:615073,Orphanet:ORPHA329466 Dystonia 25 germline 18 11824933 TCTTTCAAACTTTAGGAATTCTTTGACCATGTGAAAAAACTTTGGGACGATGAAGGCGTGA 61750641 105317 NM_000350.2(ABCA4):c.6089G>A (p.Arg2030Gln) ABCA4 Jun 02, 2017 MeSH:C535804,MedGen:C1855465,OMIM:248200;MeSH:C535804,MedGen:C1855465,OMIM:248200;MedGen:CN517202 Stargardt disease 1;Stargardt disease 1;not provided germline 1 94005499 TTGATGCAATTGATGAGCTGCTCACAGGACGAGAACATCTTTACCTTTATGCCCGGCTTCG 879255210 246620 NM_000527.4(LDLR):c.2430G>A (p.Trp810Ter) LDLR Feb 17, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000;MedGen:CN517202 Familial hypercholesterolemia;not provided germline 19 11129553 CTTCCTTTGCCTGGGGGTCTTCCTTCTATGGAAGAACTGGCGGCTTAAGAACATCAACAGC 797045152 205553 NM_001190787.1(MCIDAS):c.1142G>A (p.Arg381His) MCIDAS Sep 03, 2015 MedGen:C0022521,OMIM:244400,Orphanet:ORPHA98861,SNOMED CT:42402006 Kartagener syndrome germline 5 55220382 TCAGAACAGCCAACGGGGGTTACAAGTTCCGCTGGGTCCCCAGTTGAGCTGTGATGTGGTC 587776449 165899 NM_002775.4(HTRA1):c.961G>A (p.Ala321Thr) HTRA1 Feb 18, 2015 MedGen:C1838577,OMIM:600142,Orphanet:ORPHA199354;MedGen:C1838577,OMIM:600142,Orphanet:ORPHA199354 Cerebral autosomal recessive arteriopathy with subcortical infarcts and leukoencephalopathy;Cerebral autosomal recessive arteriopathy with subcortical infarcts and leukoencephalopathy germline 10 122506874 AACTCAGACATGGACTACATCCAGACCGACGCCATCATCAACGTGAGCCTCTGTCCCTCTG 376787666 423236 NM_012447.3(STAG3):c.1573+5G>A STAG3 Apr 10, 2017 MedGen:C3810367,OMIM:615723 Premature ovarian failure 8 germline;not applicable 7 100199372 AAGCCTGCTGCTGGAGAAGGACCAGAGTACGTGTCACACGGAGCCAGGGACAGGGACCTTC 771298943 187055 NM_000071.2(CBS):c.1039G>A (p.Gly347Ser) CBS Jun 29, 2015 MedGen:C3150344,OMIM:236200;MedGen:CN517202 Homocystinuria due to CBS deficiency;not provided germline;unknown 21 43062311 ATGCTGATCGCGCAAGAGGGGCTGCTGTGCGGTGAGTGGGTGGCGGGCACGGGGGTATGGG -1 465177 NM_000138.4(FBN1):c.6038-1G>A FBN1 Feb 27, 2017 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:CN118826,Orphanet:ORPHA91387 Marfan syndrome;Thoracic aortic aneurysm and aortic dissection germline 15 48441847 TGACTTTGTTTGACTCATGTGATTCTTTTAGATATTGATGAGTGTGTCGAAGAGCCAGAAA 67586389 34242 NM_004082.4(DCTN1):c.212G>A (p.Gly71Glu) DCTN1 Feb 01, 2014 MedGen:C1868594,OMIM:168605,Orphanet:ORPHA178509 Perry syndrome germline 2 74378067 TTCTGGATGAAGCAAAGGGCAAAAATGATGGAACTGTTCAAGGCAGGAAGTACTTCACTTG 397517989 57591 NM_206933.2(USH2A):c.14180G>A (p.Trp4727Ter) USH2A Mar 06, 2012 MedGen:C1848634,OMIM:276901 Usher syndrome, type 2A germline 1 215650755 CTGCAGGAAAAGCCCCCAGTAGCTGGACATGGTGCAGAACCGGGCCAGCCCCACCAGAAGG 369414658 433314 NM_000132.3(F8):c.6089G>A (p.Ser2030Asn) F8 Feb 07, 2017 MedGen:CN169374 not specified germline X 154902077 TTATTGGCGAGCATCTACATGCTGGGATGAGCACACTTTTTCTGGTGTACAGCAATAGTGA 794729213 198647 NM_000284.3(PDHA1):c.422G>A (p.Arg141Gln) PDHA1 Sep 23, 2013 MedGen:C1839413,OMIM:312170,Orphanet:ORPHA79243 Pyruvate dehydrogenase E1-alpha deficiency unknown X 19353085 CACATGTGTATGTTCTGCCATTTCCAGGACGAAAAGGAGGTTGTGCTAAAGGGAAAGGAGG 63750437 95586 NM_000249.3(MLH1):c.230G>A (p.Cys77Tyr) MLH1 Sep 08, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Hereditary cancer-predisposing syndrome;Lynch syndrome germline 3 37000977 TCTAACAGAAAGAAGATCTGGATATTGTATGTGAAAGGTTCACTACTAGTAAACTGCAGTC 397508249 67982 NM_000492.3(CFTR):c.165-1G>A CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008;MedGen:C0238339,OMIM:167800,Orphanet:ORPHA676,SNOMED CT:68072000 Cystic fibrosis;Hereditary pancreatitis germline 7 117509033 CTTATTGGTCCCACTTTTTATTCTTTTGCAGAGAATGGGATAGAGAGCTGGCTTCAAAGAA 397514259 75335 NG_001332.2:g.1074699G>A TRAC Feb 01, 2011 MedGen:C3809332,OMIM:615387,Orphanet:ORPHA397959 T-cell receptor alpha/beta deficiency germline 14 22550664 CTCATGACGCTGCGGCTGTGGTCCAGCTGAGGTGAGGGGCCTTGAAGCTGGGAGTGGGGTT 387907084 39997 NM_001083961.1(WDR62):c.193G>A (p.Val65Met) WDR62 Nov 01, 2010 MedGen:C1858535,OMIM:604317 Primary autosomal recessive microcephaly 2 germline 19 36058795 GCTTTTTCTTTGCAGGTGTCACTCGAGAAGGTGCTTGGCATCACAGCCCAGAACAGCAGTG 397508393 68176 NM_000492.3(CFTR):c.2537G>A (p.Trp846Ter) CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline 7 117594976 ATATGGAGAGCATACCAGCAGTGACTACATGGAACACATACCTTCGATATATTACTGTCCA 1057518074 359911 NM_001197104.1(KMT2A):c.3464G>A (p.Cys1155Tyr) KMT2A Nov 21, 2016 MedGen:CN517202 not provided germline 11 118478096 CAGTAAAGAAAGGACGTCGATCGAGGCGGTGTGGGCAGTGTCCCGGCTGCCAGGTGCCTGA 1057521930 365927 NM_000090.3(COL3A1):c.1106G>A (p.Gly369Glu) COL3A1 Dec 19, 2016 MedGen:CN517202 not provided germline 2 188993416 CTGGTTCAAATGGTGCCCCTGGACAAAGAGGAGAACCTGGACCTCAGGGACACGCTGGTGC 200725073 359143 NM_138773.3(SLC25A46):c.746G>A (p.Gly249Asp) SLC25A46 Jan 14, 2017 MedGen:C4225302,OMIM:616505 NEUROPATHY, HEREDITARY MOTOR AND SENSORY, TYPE VIB germline 5 110761271 GTGTTAAAGAAGGAATTGGAAGAGTGATAGGCATGGGAGTGCCTCATAGCAAACGACTTCT 587784553 169477 NM_001083961.1(WDR62):c.332+1G>A WDR62 Dec 18, 2012 MedGen:C1858535,OMIM:604317 Primary autosomal recessive microcephaly 2 germline 19 36060031 CAAGCAGCAGCACATCTTTAACACCGCCAGGTAGGCTGAGGCCTGGGCCCGGGGCAGGGGT 781376927 440913 NM_000426.3(LAMA2):c.5234+1G>A LAMA2 Mar 30, 2016 MedGen:CN517202 not provided germline 6 129391654 ACAAAAGGAAATTGCTGAAGATGAGTTGGTGTGAGTAGATGAGTTATTATTTTTTCTTTTG 121912431 29791 NM_000454.4(SOD1):c.112G>A (p.Gly38Arg) SOD1 Aug 31, 2016 MedGen:C1862939,OMIM:105400;MedGen:C0085084,Orphanet:ORPHA98503,SNOMED CT:37340000 Amyotrophic lateral sclerosis type 1;Motor neuron disease germline;unknown 21 31663829 GGACCAGTGAAGGTGTGGGGAAGCATTAAAGGACTGACTGAAGGCCTGCATGGATTCCATG 794728192 197762 NM_000138.4(FBN1):c.2539+1G>A FBN1 Jan 12, 2014 MedGen:CN517202 not provided germline 15 48495468 CTTTGGATCCAACAAAAACCATCTGCATAGGTATTTATCTTTCTGAGAATGATTTTTCTAT 1064793494 407583 NM_000368.4(TSC1):c.107-1G>A TSC1 Apr 14, 2015 MedGen:CN517202 not provided germline 9 132927305 AGTATCATCCATTGCCCTTTTCTTGATTTAGACCGTGGCCCTATGCTTGTAAACACCTTGG 797045074 263150 NM_006087.3(TUBB4A):c.1164G>A (p.Met388Ile) TUBB4A Jul 05, 2016 MedGen:C2676244,OMIM:612438,Orphanet:ORPHA139441 Leukodystrophy, hypomyelinating, 6 germline 19 6495335 CAAGCGCATCTCCGAGCAGTTCACGGCCATGTTCCGGCGCAAGGCCTTCTTGCACTGGTAC 886039765 260407 NM_021815.4(SLC5A7):c.194G>A (p.Gly65Glu) SLC5A7 Oct 07, 2016 MedGen:C4310694,OMIM:617143 Myasthenic syndrome, congenital, 20, presynaptic germline 2 107992121 TTCATTCTGTTTCAGCTACCTGGGTCGGAGGAGGGTATATCAATGGCACAGCTGAAGCAGT 104886248 36004 NM_000495.4(COL4A5):c.3641G>A (p.Gly1214Glu) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108668355 AGGGTGATGGAGGATTACCTGGGATTCCAGGAAATCCTGGCCTTCCAGGTCCAAAGGGCGA 77408163 33279 NM_000477.6(ALB):c.79+1G>A ALB Jan 02, 2002 MedGen:C4015776 Analbuminemia baghdad germline 4 73404407 ATTCCAGGGGTGTGTTTCGTCGAGATGCACGTAAGAAATCCATTTTTCTATTGTTCAACTT 267607090 19837 NM_004863.3(SPTLC2):c.1075G>A (p.Val359Met) SPTLC2 Oct 08, 2010 MedGen:CN068843 NEUROPATHY, HEREDITARY SENSORY, TYPE IC germline 14 77555401 ATTGGCGCCCTGGGCCCCACAGGCCGGGGTGTGGTGGAGTACTTTGGCCTGGATCCCGAGG 387907345 51193 NM_001130004.1(ACTN1):c.313G>A (p.Val105Ile) ACTN1 Nov 12, 2015 MedGen:C3554663,OMIM:615193 Platelet-type bleeding disorder 15 germline;unknown 14 68921033 AAGGCCCTGGATTTCATAGCCAGCAAAGGCGTCAAACTGGTGTCCATCGGAGCCGAAGGTA 879255663 247669 NM_144997.5(FLCN):c.752G>A (p.Trp251Ter) FLCN Jul 18, 2016 MedGen:C0346010,OMIM:135150,Orphanet:ORPHA122,SNOMED CT:110985001 Multiple fibrofolliculomas germline 17 17222528 TGACATCGCTGACAAGTGATGACAACCTGTGGGCGTGCCTGCACACCTCCTTTGCCTGGTA 786204793 187135 NM_004577.3(PSPH):c.103G>A (p.Ala35Thr) PSPH Mar 30, 2015 MedGen:C1291463,OMIM:614023,Orphanet:ORPHA79350,SNOMED CT:124432005 Deficiency of phosphoserine phosphatase germline 7 56021110 GTCATCAGAGAAGAAGGAATCGATGAGCTAGCCAAAATCTGTGGCGTTGAGGACGCGGTGT 104886172 35845 NM_000495.4(COL4A5):c.2297G>A (p.Gly766Asp) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108606794 CTGGGCCACCTGGGCCACCAGGACTTCCAGGTTTCAAAGGAGCACTTGGTCCAAAAGGTGA 118192208 34654 NM_172107.3(KCNQ2):c.807G>A (p.Trp269Ter) KCNQ2 Jun 22, 2017 MedGen:C1852587,OMIM:121200;MedGen:CN517202 Benign familial neonatal seizures 1;not provided germline 20 63442415 CCACTTTGACACCTACGCGGATGCACTCTGGTGGGGCCTGGTGAGTTGTGGTCATTGTGGT 1131691703 422488 NM_007075.3(WDR45):c.887G>A (p.Trp296Ter) WDR45 May 18, 2017 MedGen:CN517202 not provided germline X 49075225 CTATGATTGGGCAGTACGTGGACTCTCAGTGGAGCCTGGCGAGCTTCACTGTGCCTGCTGA 587779444 106877 NM_000090.3(COL3A1):c.3417+1G>A (p.Gly1122_Arg1139del+) COL3A1 Dec 13, 2016 MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000;MedGen:CN517202 Ehlers-Danlos syndrome, type 4;not provided de novo;germline 2 189007939 ATCGGCAGTCCAGGACCTGCAGGCCCCAGAGTAAGTAGCACAGAAAGATATTACAGGTCCA 397514619 48438 NM_001001344.2(ATP2B3):c.3320G>A (p.Gly1107Asp) ATP2B3 Mar 15, 2017 MedGen:C0796205,OMIM:302500,Orphanet:ORPHA1175;MedGen:CN517202 Spinocerebellar ataxia, X-linked 1;not provided germline X 153565081 TCCGCAGGGGCCAGATCCTCTGGTTCCGGGGCCTGAACCGGATTCAGACGCAGGTAAGCCC 137852710 23880 NM_000336.2(SCNN1B):c.1615G>A (p.Glu539Lys) SCNN1B Nov 15, 2005 MedGen:C2749757,OMIM:211400 Bronchiectasis with or without elevated sweat chloride 1 germline 16 23380493 TGGATGGGGGGCTCTGTGCTGTGCCTCATCGAGTTTGGGGAGATCATCATCGACTTTGTGT 796052235 204058 NM_001193416.2(DDX3X):c.1463G>A (p.Arg488His) DDX3X Jun 30, 2017 MedGen:CN517202 not provided germline X 41346376 GGGATAGAGAAGAGGCCCTTCACCAGTTCCGCTCAGGAAAAAGCCCAATTTTAGTGGCTAC 80358053 46185 NM_007294.3(BRCA1):c.5074+1G>A BRCA1 Mar 19, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline 17 43067607 AAGAGACTACTCATGTTGTTATGAAAACAGGTATACCAAGAACCTTTACAGAATACCTTGC -1 452309 NM_153240.4(NPHP3):c.1985+1G>A NPHP3 Apr 11, 2017 MedGen:C0687120,Orphanet:ORPHA655,SNOMED CT:204958008 Nephronophthisis germline 3 132699352 GAATGTAGAAACATGCCCTCCAGCATGGAGGTACGATGCCAACTTTAGTTCTTTCAGAGTA 121908840 21572 NM_003722.4(TP63):c.953G>A (p.Arg318His) TP63 Jan 05, 2018 MedGen:C1858562,OMIM:604292;MedGen:C1785148,OMIM:129400,Orphanet:ORPHA1071,SNOMED CT:7731005;MedGen:CN239305;MedGen:CN517202 Ectrodactyly, ectodermal dysplasia, and cleft lip/palate syndrome 3;Rapp-Hodgkin ectodermal dysplasia syndrome;TP63-Related Spectrum Disorders;not provided germline 3 189867903 GTAACAGCAGTTGTGTTGGAGGGATGAACCGCCGTCCAATTTTAATCATTGTTACTCTGGA 121908236 23550 NM_001127221.1(CACNA1A):c.860G>A (p.Cys287Tyr) CACNA1A Jun 28, 2005 MedGen:C1720416,OMIM:108500,Orphanet:ORPHA97,SNOMED CT:420932006 Episodic ataxia type 2 germline 19 13359724 CCGCCCGCACCTGCCCCAATGGGACCAAATGTCAGCCCTACTGGGAAGGGCCCAACAACGG 672601369 171772 NM_001244008.1(KIF1A):c.757G>A (p.Glu253Lys) KIF1A Apr 27, 2017 MedGen:C3280283,OMIM:614255;MedGen:CN517202 Mental retardation, autosomal dominant 9;not provided de novo;germline 2 240783780 AAAATCAGCCTGGTGGACCTGGCTGGGAGCGAGCGGGCTGACTCCACGGGAGCCAAGGGCA 1057518735 359050 NM_001204527.1(SSR4):c.441+1G>A SSR4 Nov 28, 2016 MedGen:C4012395,OMIM:300934,Orphanet:ORPHA370927 Congenital disorder of glycosylation type 1y germline X 153798137 CCTCTGTTTACAGTCAGCGTGGACCATCGGGTGAGTGGCCTGGTCCCTCCTCCTTTTTGGG 121909294 23219 NM_007272.2(CTRC):c.164G>A (p.Trp55Ter) CTRC Mar 13, 2014 MedGen:C0238339,OMIM:167800,Orphanet:ORPHA676,SNOMED CT:68072000;MedGen:C1969419 Hereditary pancreatitis;Pancreatitis, chronic, susceptibility to germline 1 15440524 TCTCCCTCCAGTACCTCAAGAACGACACGTGGAGGCATACGTGTGGCGGGACTTTGATTGC 62516147 108237 NM_000277.2(PAH):c.1065+1G>A PAH Aug 26, 2016 MedGen:C0031485,OMIM:261600,Orphanet:ORPHA716,SNOMED CT:154735006;MedGen:CN517202 Phenylketonuria;not provided unknown 12 102844335 GGGCTCCTGTCATCCTTTGGTGAATTACAGGTATGACCTTCACAGGAACCAAGGATAGATT 1057516098 354008 NM_172107.3(KCNQ2):c.868G>A (p.Gly290Ser) KCNQ2 Nov 10, 2017 MedGen:C0393706,Orphanet:ORPHA1934;MedGen:C3150986,OMIM:613720,Orphanet:ORPHA439218;MedGen:CN517202 Early infantile epileptic encephalopathy;Early infantile epileptic encephalopathy 7;not provided germline 20 63439657 TACGGGGACAAGTACCCCCAGACCTGGAACGGCAGGCTCCTTGCGGCAACCTTCACCCTCA 28935171 26697 NM_004586.2(RPS6KA3):c.2186G>A (p.Arg729Gln) RPS6KA3 Aug 01, 2016 MedGen:C0265252,OMIM:303600,SNOMED CT:15182000;MedGen:CN517202 Coffin-Lowry syndrome;not provided germline X 20155435 AACCAGTAGGCCGCTCTACTCTTGCTCAGCGGAGAGGTATTAAAAAAATCACCTCAACAGC 267606599 15384 NM_000267.3(NF1):c.3113+1G>A NF1 Apr 01, 1995 MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003 Neurofibromatosis, type 1 germline 17 31230383 CCTCTCATTTTGCCAAGAGATGAAATTTAGGTGAGTTCTCAAAAGAGCAATGTAGGGTCTT 28941776 18737 NM_000527.4(LDLR):c.1646G>A (p.Gly549Asp) LDLR Jun 29, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000;MedGen:CN118841;MedGen:CN517202 Familial hypercholesterolemia;Familial hypercholesterolemias;not provided germline;not applicable;unknown 19 11116153 CCGCCAAGATCAAGAAAGGGGGCCTGAATGGTGTGGACATCTACTCGCTGGTGACTGAAAA 886039247 259334 NM_001242896.1(DEPDC5):c.435G>A (p.Trp145Ter) DEPDC5 Apr 13, 2016 Gene:50987,MedGen:C1858477,OMIM:604364 Epilepsy, familial focal, with variable foci 1 germline 22 31778120 TTCTTTCAGAGCACAGGCTGGTGAACTGTGGGTTAAGAATGAGAAGGTCATGTGTGGCTAC 60090257 77279 NM_000526.4(KRT14):c.915G>A (p.Trp305Ter) KRT14 Sep 07, 2015 MedGen:CN517202 not provided germline 17 41583772 AGAGAAGAACCGCAAGGATGCCGAGGAATGGTTCTTCACCAAGGTGGGTGTCATTTGAGGT 879254717 245851 NM_000527.4(LDLR):c.914G>A (p.Trp305Ter) LDLR Mar 25, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11107488 TCTGCAACATGGCTAGAGACTGCCGGGACTGGTCAGATGAACCCATCAAAGAGTGCGGTGA 879254721 245861 NM_000527.4(LDLR):c.922G>A (p.Glu308Lys) LDLR Mar 25, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11107496 ATGGCTAGAGACTGCCGGGACTGGTCAGATGAACCCATCAAAGAGTGCGGTGAGTCTCGGT -1 482126 NM_000267.3(NF1):c.5793G>A (p.Trp1931Ter) NF1 Oct 02, 2017 MedGen:CN517202 not provided germline 17 31334881 ACACCTTTGTTTGGAATACATGACTCCATGGCTGTCAAATCTAGTTCGTTTTTGCAAGCAT 879254866 246103 NM_000527.4(LDLR):c.1328G>A (p.Trp443Ter) LDLR Mar 25, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11113419 ACACGGAGGTGGCCAGCAATAGAATCTACTGGTCTGACCTGTCCCAGAGAATGATCTGCAG 121918727 27534 NM_000359.2(TGM1):c.857G>A (p.Arg286Gln) TGM1 Dec 10, 2015 MedGen:C3536797,OMIM:242300;MedGen:CN517202 Autosomal recessive congenital ichthyosis 1;not provided germline 14 24259959 ACTACGGGACCGAAGCACAGATTGGTGAGCGGACCTGGAACTACGGCCAGGTATGGTGCGG 121917918 79420 NM_006920.4(SCN1A):c.302G>A (p.Arg101Gln) SCN1A Mar 28, 2017 MedGen:C0393706,Orphanet:ORPHA1934;MedGen:C1858673,OMIM:604403;MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002;MedGen:CN517202 Early infantile epileptic encephalopathy;Generalized epilepsy with febrile seizures plus, type 2;Severe myoclonic epilepsy in infancy;not provided germline;inherited;unknown 2 166058651 TAGTATTGAATAAAGGGAAGGCCATCTTCCGGTTCAGTGCCACCTCTGCCCTGTACATTTT 121908138 19454 NM_020919.3(ALS2):c.470G>A (p.Cys157Tyr) ALS2 Feb 10, 2011 MedGen:C1846588,OMIM:607225 Infantile-onset ascending hereditary spastic paralysis germline 2 201761524 TGTTAGCAGTCAGGATTTTACAGTTGGCGTGTGGCGAGGAGCACACTCTGGCATTGTCAAT -1 432192 NM_000444.5(PHEX):c.2078G>A (p.Cys693Tyr) PHEX Oct 31, 2013 MedGen:C0733682,OMIM:307800,Orphanet:ORPHA89936,SNOMED CT:82236004 Familial X-linked hypophosphatemic vitamin D refractory rickets germline;paternal X 22245340 GTTGGGATGCTTTTCTCTTCTAGGTGAGGTGCAATTCCTACAGACCAGAAGCTGCCCGAGA 886044750 237652 NM_000350.2(ABCA4):c.5312+1G>A ABCA4 Jan 01, 2016 MeSH:C535804,MedGen:C1855465,OMIM:248200 Stargardt disease 1 germline;unknown 1 94015738 TGCCCTTGTGGCACTGCTCCTGCTGTATGGGTAAGCCGTTTGGGCCATTAGCTAATGCCTC 587781655 151033 NM_032043.2(BRIP1):c.918+1G>A BRIP1 Sep 08, 2017 MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C1836860,OMIM:609054;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Familial cancer of breast;Fanconi anemia, complementation group J;Hereditary cancer-predisposing syndrome;not provided germline 17 61808466 AAGTGCATGGAATTGCTAGATGGGAAAAACGTGAGTAAAGTTATTTTGTGTTAGAGAAAAA 1085308061 417344 NM_020964.2(EPG5):c.4007G>A (p.Gly1336Glu) EPG5 Jun 03, 2017 MedGen:C1855772,OMIM:242840,Orphanet:ORPHA1493 Absent corpus callosum cataract immunodeficiency germline 18 45910719 TTTTAAGGTTACCCATAGATGGTTGTATTGGAAGAAGGTTTTTTCAAAGTCCTGCTCATAT 1131691061 420754 NM_003000.2(SDHB):c.3G>A (p.Met1Ile) SDHB Aug 24, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1861848,OMIM:115310 Hereditary cancer-predisposing syndrome;Paragangliomas 4 germline 1 17054017 AGGGGTGGGGCTGACGTCAGGAGCCAAGATGGCGGCGGTGGTCGCCCTCTCCTTGAGGCGC 145955590 187685 NM_000751.2(CHRND):c.1204G>A (p.Glu402Lys) CHRND Oct 01, 2006 MedGen:C4225370,OMIM:616323 Myasthenic syndrome, congenital, 3c, associated with acetylcholine receptor deficiency germline 2 232534087 CTGCTCAAGTCCCGCAGTGACCTCATGTTCGAGAAGCAGTCAGAGCGGCATGGGCTGGCCA 527236033 152915 NM_030665.3(RAI1):c.2273G>A (p.Trp758Ter) RAI1 - MedGen:C0795864,OMIM:182290,Orphanet:ORPHA819,SNOMED CT:401315004 Smith-Magenis syndrome de novo 17 17795221 AGGAAAACCTGGGGGATGCTTGTCCCAGGTGGGGATTGCACCCTGGCGAGCTTACCAAGGG 796052065 200597 NM_000030.2(AGXT):c.1045G>A (p.Gly349Ser) AGXT Nov 27, 2014 MedGen:C0268164,OMIM:259900,Orphanet:ORPHA93598,SNOMED CT:65520001 Primary hyperoxaluria, type I germline 2 240878124 GTCATAGACCACTTCGACATTGAGATCATGGGTGGCCTTGGGCCCTCCACGGGGAAGGTGA 121908626 21066 NM_001190383.1(GNE):c.1669G>A (p.Ala557Thr) GNE Sep 01, 2001 MedGen:C1853926,OMIM:605820 Nonaka myopathy germline 9 36218225 GCTGTGGGTGCGCTCCATCTCATCCAAGCTGCGAAACTTGGCAATGCGAAGGCCCAGAGCA 121908032 18742 NM_000527.4(LDLR):c.2439G>A (p.Trp813Ter) LDLR Mar 25, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11129562 CCTGGGGGTCTTCCTTCTATGGAAGAACTGGCGGCTTAAGAACATCAACAGCATCAACTTT 397514639 48592 NM_022369.3(STRA6):c.1964G>A (p.Arg655His) STRA6 Dec 08, 2015 MedGen:C1832661,OMIM:601186,Orphanet:ORPHA2470;na;MedGen:CN517202 Microphthalmia syndromic 9;STRA6-Related Disorder;not provided germline;maternal 15 74180120 TGCTGCACAACCCAACCCTGCAGGTCTTCCGCAAGACGGCCCTGTTGGGTGCCAATGGTGC 267608474 187593 NM_003159.2(CDKL5):c.404-1G>A CDKL5 Mar 13, 2014 MedGen:C1839333,OMIM:300672 Early infantile epileptic encephalopathy 2 unknown X 18581890 TACTAATTTTTTTTTTATCTTGACACTCCAGATATAAAACCAGAAAATCTCTTAATCAGCC -1 433658 NM_194456.1(KRIT1):c.1890G>A (p.Trp630Ter) KRIT1 Jun 27, 2017 MedGen:C1861784,OMIM:116860;MedGen:CN169374 Cerebral cavernous malformation;not specified germline 7 92213330 CCTTCAGCGCATGTTCTTACAGAATTGCTGGGAAATTCCTACTTATGGAGCAGCATTTTTC 864622197 222146 NM_000256.3(MYBPC3):c.906-36G>A MYBPC3 Apr 28, 2017 Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569 Hypertrophic cardiomyopathy germline 11 47347065 TTCTCTCTGCCCTCTCTCTCCCTCTCCCCCGGCCCCTCCATTATGGCTGCTGCTGCTGTGG 387906852 39266 NM_005902.3(SMAD3):c.836G>A (p.Arg279Lys) SMAD3 Sep 02, 2011 MedGen:C3151087,OMIM:613795,Orphanet:ORPHA284984 Loeys-Dietz syndrome 3 germline 15 67181418 TCTGCCTAGGGCTGCTCTCCAATGTCAACAGGAATGCAGCAGTGGAGCTGACACGGAGACA 121965019 26947 NM_000203.4(IDUA):c.1205G>A (p.Trp402Ter) IDUA Jul 14, 2017 Human Phenotype Ontology:HP:0000943,MedGen:C0086795,OMIM:607014,Orphanet:ORPHA93473;Human Phenotype Ontology:HP:0000943,MedGen:C0086795,OMIM:607014,Orphanet:ORPHA93473;MedGen:C0023786,Orphanet:ORPHA579;MedGen:C0086431,OMIM:607015,Orphanet:ORPHA93476,SNOMED CT:26745009;MedGen:C0026708,OMIM:607016,Orphanet:ORPHA93474,SNOMED CT:73123008;MedGen:CN517202 Hurler syndrome;Hurler syndrome;Mucopolysaccharidosis type I;Mucopolysaccharidosis, MPS-I-H/S;Mucopolysaccharidosis, MPS-I-S;not provided germline;unknown 4 1002747 CCCCCCGCCCCGCAGATGAGGAGCAGCTCTGGGCCGAAGTGTCGCAGGCCGGGACCGTCCT 786205902 190097 NM_004736.3(XPR1):c.407G>A (p.Ser136Asn) XPR1 Jun 01, 2015 MedGen:C4225335,OMIM:616413 Basal ganglia calcification, idiopathic, 6 germline 1 180803571 GAAATATTAAAGACCTTAAACTGGCCTTCAGTGAGTTCTACCTCAGTCTAATCCTGCTGCA 121909790 22784 NM_001017535.1(VDR):c.98G>A (p.Gly33Asp) VDR Dec 23, 1988 MedGen:C0268690,OMIM:277440,SNOMED CT:72831007 Vitamin D-dependent rickets, type 2 germline 12 47879016 TCTGTGGGGTGTGTGGAGACCGAGCCACTGGCTTTCACTTCAATGCTATGACCTGTGAAGG 74315440 31997 NM_000394.3(CRYAA):c.27G>A (p.Trp9Ter) CRYAA Oct 01, 2000 MedGen:C4015984 Cataract 9, autosomal recessive germline 21 43169126 GAACATGGACGTGACCATCCAGCACCCCTGGTTCAAGCGCACCCTGGGGCCCTTCTACCCC 72657696 427087 NM_001171.5(ABCC6):c.182G>A (p.Gly61Asp) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16221686 ACCTCCTCTTCATCCACCACCATGGCCGGGGCTACCTCCGGATGTCCCCACTCTTCAAAGC 140108514 100191 NM_003494.3(DYSF):c.2643+1G>A DYSF Jul 29, 2016 MedGen:C1850889,OMIM:253601,Orphanet:ORPHA268;MedGen:C1850889,OMIM:253601,Orphanet:ORPHA268;MedGen:C1850889,OMIM:253601,Orphanet:ORPHA268;MedGen:C1850808,OMIM:254130,Orphanet:ORPHA45448;MedGen:CN517202 Limb-girdle muscular dystrophy, type 2B;Limb-girdle muscular dystrophy, type 2B;Limb-girdle muscular dystrophy, type 2B;Miyoshi muscular dystrophy 1;not provided germline;unknown 2 71568083 GAGGGGAAGCTGTCTGTCTTTGCTGAAACCGTGAGTACCTGCCAGCCCCCACCTCTGCCTC 113602180 374193 NM_000138.4(FBN1):c.2810G>A (p.Cys937Tyr) FBN1 Mar 14, 2017 MedGen:CN517202 not provided germline 15 48492505 TTAACACTAGGGGGTCATTCAAGTGTCAGTGTCCCAGTGGAATGACTTTGGATGCCACAGG 762307622 232266 NM_001128425.1(MUTYH):c.467G>A (p.Trp156Ter) MUTYH Apr 21, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1837991,OMIM:608456,Orphanet:ORPHA247798;MedGen:CN517202 Hereditary cancer-predisposing syndrome;MYH-associated polyposis;not provided germline;unknown 1 45332955 CTCTTTCTGCCTGCCTGTGGCTATAGAAGTGGCCTACACTGCAGGACCTGGCCAGTGCTTC 797044872 205316 NM_004977.2(KCNC3):c.1268G>A (p.Arg423His) KCNC3 Feb 09, 2017 MeSH:D030342,MedGen:C0950123;MedGen:CN517202 Inborn genetic diseases;not provided germline 19 50323685 TGCGGGTGGTCCGCTTCGTCCGCATCCTGCGCATCTTCAAGCTGACCCGGCACTTCGTGGG 267606702 15321 NM_001159772.1(CANT1):c.374G>A (p.Trp125Ter) CANT1 Nov 01, 2009 MedGen:C4012146,OMIM:251450 Desbuquois dysplasia 1 germline 17 78997249 CAGAGTCAAGGGCCCAAGAGGAAAACACCTGGTTCAGTTACCTGAAAAAGGGCTACCTGAC 373910016 181391 NM_002335.3(LRP5):c.1360G>A (p.Val454Met) LRP5 Feb 21, 2018 Human Phenotype Ontology:HP:0006557,MedGen:C0158683,OMIM:174050,SNOMED CT:72925005;MedGen:CN818987,OMIM:617875 Congenital cystic disease of liver;POLYCYSTIC LIVER DISEASE 4 WITH OR WITHOUT KIDNEY CYSTS germline 11 68386660 CGCCTCAACGGCACCTCCCGCAAGATCCTGGTGTCGGAGGACCTGGACGAGCCCCGAGCCA 875989933 246384 NM_000527.4(LDLR):c.1860G>A (p.Trp620Ter) LDLR Mar 30, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11120106 CTTGCTGCCTGTTTAGGACAAAGTATTTTGGACAGATATCATCAACGAAGCCATTTTCAGT 121913627 29130 NM_000257.3(MYH7):c.1816G>A (p.Val606Met) MYH7 Jun 15, 2017 MedGen:CN230736;MedGen:C3495498,OMIM:192600;MedGen:C3495498,OMIM:192600;Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Cardiovascular phenotype;Familial hypertrophic cardiomyopathy 1;Familial hypertrophic cardiomyopathy 1;Hypertrophic cardiomyopathy;Primary familial hypertrophic cardiomyopathy;not provided germline 14 23427657 AAGAACAAGGATCCTCTCAATGAGACTGTCGTGGGCTTGTATCAGAAGTCTTCCCTCAAGC 863224956 213828 NM_000070.2(CAPN3):c.1343G>A (p.Arg448His) CAPN3 Sep 18, 2016 MedGen:C1869123,OMIM:253600,Orphanet:ORPHA267 Limb-girdle muscular dystrophy, type 2A germline 15 42399641 GGGTACGGGGTTGCTCTGCCGGAGGCTGCCGCAACTTCCCAGGTGGGAGATGCTCTTGATG 281865552 103178 NM_000531.5(OTC):c.663G>A (p.Lys221=) OTC - MedGen:CN517202 not provided unknown X 38403740 CGGAATGCACCTTCAGGCAGCTACTCCAAAGGTAGGGAAACTTTTTGCCTTGAAACTAACC 606231444 170970 NM_152296.4(ATP1A3):c.2780G>A (p.Cys927Tyr) ATP1A3 May 04, 2014 MedGen:C3553788,OMIM:614820 Alternating hemiplegia of childhood 2 de novo 19 41968824 TTGTCGTCCAGTGGGCCGATCTGATCATCTGCAAGACCCGGAGGAACTCGGTCTTCCAGCA 199476198 47854 NM_207352.3(CYP4V2):c.1020G>A (p.Trp340Ter) CYP4V2 Apr 12, 2012 MedGen:C1859486,OMIM:210370,Orphanet:ORPHA41751 Bietti crystalline corneoretinal dystrophy not provided 4 186205232 GCACGATACAACTGCAGCTGCAATAAACTGGTCCTTATACCTGTTGGGTTCTAACCCAGAA 1114167650 416969 NM_000314.6(PTEN):c.209+5G>A PTEN May 26, 2017 MedGen:CN072330,OMIM:158350;MedGen:C0027672,SNOMED CT:699346009 Cowden syndrome 1;Hereditary cancer-predisposing syndrome germline 10 87925562 AAAAACCATTACAAGATATACAATCTGTAAGTATGTTTTCTTATTTGTATGCTTGCAAATA 879254688 245808 NM_000527.4(LDLR):c.818-1G>A LDLR Mar 30, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11107391 CCTTCCTCCTTCCTCTCTCTGGCTCTCACAGTGACACTCTGCGAGGGACCCAACAAGTTCA 121908081 19098 NM_012213.2(MLYCD):c.8G>A (p.Gly3Asp) MLYCD Oct 01, 2003 MedGen:C0342793,OMIM:248360,Orphanet:ORPHA943,SNOMED CT:124594007,SNOMED CT:361203007 Deficiency of malonyl-CoA decarboxylase germline 16 83899152 CTCGGCAGCTGTTGTGGGGCACCATGCGAGGCTTCGGGCCAGGCTTGACGGCCAGGCGTCT 386134142 32598 NM_000096.3(CP):c.3019-1G>A CP Apr 18, 2013 MedGen:C0878682,OMIM:604290,Orphanet:ORPHA48818,SNOMED CT:124224004;MedGen:C1858583 Deficiency of ferroxidase;Hemosiderosis, systemic, due to aceruloplasminemia germline 3 149176413 TTATACATTATTTGTCATTTTTCTAATTAAGCACAGGGGAGTTTATAGTTCTGATGTCTTT 137853339 24170 NM_145649.4(GCNT2):c.505G>A (p.Ala169Thr) GCNT2 Mar 15, 2003 MedGen:C1292164 ADULT i BLOOD GROUP PHENOTYPE germline 6 10529416 GTTGTCTATGGGGGGATCTCCAGGCTCCAGGCTGACCTGAACTGCCTGGAAGACCTTGTGG 797044990 204982 NM_020762.3(SRGAP1):c.823G>A (p.Ala275Thr) SRGAP1 May 01, 2013 Human Phenotype Ontology:HP:0006731,MedGen:C0206682,OMIM:188470 Thyroid cancer, follicular germline 12 64062938 CTTTTTAAGTGCTGTGATCTTGGCTACCATGCAAGTCTGAACAGAGCCCTAAGAACATATC 778222701 420012 NM_004928.2(C21orf2):c.545+1G>A C21orf2 Jun 23, 2017 MedGen:C1865695,OMIM:602271,Orphanet:ORPHA168549 Spondylometaphyseal dysplasia axial germline 21 44331842 GGACCCGCTGGACAGCGAGGAGGAGGCAACGTGAGGCTGGAGGGCAGCGGGGACTCCGCAG 144701072 77001 NM_022089.3(ATP13A2):c.2629G>A (p.Gly877Arg) ATP13A2 Feb 01, 2011 MedGen:C1847640,OMIM:606693,Orphanet:ORPHA306674 Parkinson disease 9 germline 1 16988455 CCTCTCTTCAGGTACTGCGTGGGCATGTGCGGAGACGGCGCCAATGACTGTGGGGCCCTGA 121917960 79427 NM_006920.4(SCN1A):c.3970G>A (p.Val1324Met) SCN1A Dec 20, 2014 MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002 Severe myoclonic epilepsy in infancy de novo;unknown 2 166002753 GACTTTTCTTTTTTTCCATTTGTGTATTAGGTGGTTGTGAATGCCCTTTTAGGAGCAATTC 1064793814 405441 NM_001256850.1(TTN):c.81440G>A (p.Trp27147Ter) TTN Apr 28, 2016 MedGen:CN517202 not provided germline 2 178559769 TCCGAGGAAGACCAGTACCCAATGTCTTGTGGAGTAAGCCAGACACTGACCTCCGTACTAG 587783483 169243 NM_004380.2(CREBBP):c.3779+1G>A CREBBP Feb 08, 2017 MedGen:C0035934,OMIM:180849,Orphanet:ORPHA353277,SNOMED CT:45582004;MedGen:CN517202 Rubinstein-Taybi syndrome;not provided de novo;germline 16 3751725 CCTGGGTGACGACCCTTCACAGCCCCAGACGTAAGTACCGTCCTGTCATTTTCTCTGGGGT 369560930 98197 NM_000018.3(ACADVL):c.520G>A (p.Val174Met) ACADVL Sep 26, 2017 MedGen:C3887523,OMIM:201475,Orphanet:ORPHA26793,SNOMED CT:237996001,SNOMED CT:237997005;MedGen:CN517202 Very long chain acyl-CoA dehydrogenase deficiency;not provided germline;unknown 17 7221580 GTGGAGATCGTGGGCATGCATGACCTTGGCGTGGGCATTACCCTGGGGGCCCATCAGAGCA 80358099 70167 NM_007294.3(BRCA1):c.5278-1G>A BRCA1 May 04, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome germline 17 43051118 CCTGTCCCTCTCTCTTCCTCTCTTCTTCCAGATCTTCAGGGGGCTAGAAATCTGTTGCTAT 766542823 421944 NM_015665.5(AAAS):c.885G>A (p.Trp295Ter) AAAS Sep 21, 2015 MedGen:CN517202 not provided germline 12 53309207 CCGAGGAGGTGGGGTGACCAACCTGCTCTGGTCCCCAGACGGCAGCAAAATCCTGGCTACC 113994105 32458 NM_001845.5(COL4A1):c.1555G>A (p.Gly519Arg) COL4A1 Mar 08, 2011 MedGen:C2673195,OMIM:611773,Orphanet:ORPHA73229 Angiopathy, hereditary, with nephropathy, aneurysms, and muscle cramps germline 13 110187311 TTGTTCTTACAGGGCCCTCAAGGTACACCAGGGCTGATAGGCCAGCCAGGAGCCAAGGGGG 121912738 32839 NM_001681.3(ATP2A2):c.392G>A (p.Arg131Gln) ATP2A2 Jun 01, 2002 MedGen:C0022595,OMIM:124200,Orphanet:ORPHA218,SNOMED CT:48611009 Keratosis follicularis germline 12 110296666 AATATGAGCCTGAAATGGGCAAAGTGTATCGACAGGACAGAAAGAGTGTGCAGCGGATTAA 121918698 27598 NM_001252634.1(THRB):c.1313G>A (p.Arg438His) THRB Jan 20, 2012 MedGen:C2937288,OMIM:188570 Thyroid hormone resistance, generalized, autosomal dominant germline 3 24122957 TGCGGATGATAGGAGCCTGCCATGCCAGCCGCTTCCTGCACATGAAGGTGGAATGCCCCAC 28933396 28005 NM_000540.2(RYR1):c.7304G>A (p.Arg2435His) RYR1 Feb 21, 1997 MedGen:C0751951,OMIM:117000,Orphanet:ORPHA597,SNOMED CT:43152001;MedGen:CN517202 Central core disease;not provided germline;unknown 19 38499997 TCTATGCCGCCTTGATCGACCTGCTCGGACGCTGTGCACCAGAGATGCATGTGAGACCCTG 151344522 46954 NM_006796.2(AFG3L2):c.2098G>A (p.Glu700Lys) AFG3L2 May 17, 2011 MedGen:C1853249,OMIM:610246,Orphanet:ORPHA101109 Spinocerebellar ataxia 28 not provided 18 12337418 AGTGAAGCCACTGCAAGATTGATAGATGATGAAGTACGAATACTTATTAATGATGCTTATA 121907952 18931 NM_000520.5(HEXA):c.1444G>A (p.Glu482Lys) HEXA Feb 10, 2016 MedGen:C0039373,OMIM:272800,Orphanet:ORPHA845,SNOMED CT:111385000 Tay-Sachs disease germline;unknown 15 72345528 TCCTCCAGGCCCAGAGCAGGGGCTGTTGCCGAAAGGCTGTGGAGCAACAAGTTGACATCTG 587779692 107199 NM_000090.3(COL3A1):c.1258G>A (p.Gly420Ser) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188994297 ATGGGAGCCCGGGGTCCTCCAGGACCAGCCGGTGCTAATGGTGCTCCTGGACTGCGAGGTG 137854576 15852 NM_000038.5(APC):c.470G>A (p.Trp157Ter) APC Oct 20, 2016 MedGen:C2713442,OMIM:175100 Familial adenomatous polyposis 1 germline 5 112775676 ATCTTGACAAAGAAGAAAAGGAAAAAGACTGGTATTACGCTCAACTTCAGAATCTCACTAA 397516896 53980 NM_004333.4(BRAF):c.1780G>A (p.Asp594Asn) BRAF May 31, 2016 Human Phenotype Ontology:HP:0030078,MeSH:C538231,MedGen:C0152013;Human Phenotype Ontology:HP:0006744,MeSH:D018268,MedGen:C0206686,Orphanet:ORPHA1501;Human Phenotype Ontology:HP:0005550,MeSH:D015451,MedGen:C0023434,OMIM:151400,SNOMED CT:277473004,SNOMED CT:51092000;MeSH:D015179,MedGen:CN236642;Human Phenotype Ontology:HP:0002861,MeSH:D008545,MedGen:C0025202,SNOMED CT:2092003;MeSH:C562393,MedGen:C0151779,SNOMED CT:93655004;Human Phenotype Ontology:HP:0006775,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:ORPHA29073,SNOMED CT:109989006,SNOMED CT:55921005;Human Phenotype Ontology:HP:0030692,MeSH:D001932,MedGen:C0006118,SNOMED CT:126952004;Human Phenotype Ontology:HP:0030358,MeSH:D002289,MedGen:C0007131,SNOMED CT:254637007;MeSH:C535575,MedGen:C1168401,OMIM:275355,Orphanet:ORPHA67037;Human Phenotype Ontology:HP:0006740,MedGen:C0279680 Adenocarcinoma of lung;Adrenocortical carcinoma;Chronic lymphocytic leukemia;Colorectal Neoplasms;Malignant melanoma;Malignant melanoma of skin;Multiple myeloma;Neoplasm of brain;Non-small cell lung cancer;Squamous cell carcinoma of the head and neck;Transitional cell carcinoma of the bladder somatic 7 140753355 CTTCATGAAGACCTCACAGTAAAAATAGGTGATTTTGGTCTAGCTACAGTGAAATCTCGAT 1131691575 414709 NM_002693.2(POLG):c.3550G>A (p.Asp1184Asn) POLG May 16, 2017 MedGen:C0751651,Orphanet:ORPHA68380;MedGen:CN517202 Mitochondrial diseases;not provided germline 15 89317469 CCCCAGTCAGTCGCCTTTTTCAGTGCAGTCGATATTGACCGGTGCCTCAGGAAGGAAGTGA 193922868 136809 NM_000540.2(RYR1):c.14210G>A (p.Arg4737Gln) RYR1 Jun 06, 2017 MedGen:CN517202 not provided germline;unknown 19 38577955 ACAAACATGGGGACATCTACGGGCGGGAGCGGATTGCTGAGCTACTGGGCATGGACCTGGC 137852307 25516 NM_000032.4(ALAS2):c.1184G>A (p.Cys395Tyr) ALAS2 Sep 21, 2005 MedGen:C0221018,OMIM:300751,Orphanet:ORPHA98362,SNOMED CT:62677000 Hereditary sideroblastic anemia germline X 55015000 CCTTTCTGTCTCCAGGCAAGGCCTTTGGCTGTGTGGGCGGCTACATTGCCAGCACCCGTGA 104894756 25888 NM_000054.4(AVPR2):c.410G>A (p.Arg137His) AVPR2 May 05, 2005 MedGen:C1563705,OMIM:304800 Nephrogenic diabetes insipidus, X-linked germline X 153905916 CCTACATGATCCTGGCCATGACGCTGGACCGCCACCGTGCCATCTGCCGTCCCATGCTGGC 28929474 33006 NM_001127701.1(SERPINA1):c.1096G>A (p.Glu366Lys) SERPINA1 Jul 05, 2017 MedGen:C0221757,OMIM:613490,Orphanet:ORPHA60,SNOMED CT:30188007;MedGen:C0751157,OMIM:309548,SNOMED CT:254288000;na;na;na;MedGen:CN517202 Alpha-1-antitrypsin deficiency;FRAXE;PI Z;PI Z(AUGSBURG);PI Z(TUN);not provided germline;paternal;unknown 14 94378610 GCCGTGCATAAGGCTGTGCTGACCATCGACGAGAAAGGGACTGAAGCTGCTGGGGCCATGT 587776930 48222 NM_001396.3(DYRK1A):c.1098+1G>A DYRK1A Feb 06, 2013 MedGen:C3279839,OMIM:614104,Orphanet:ORPHA464306 Mental retardation, autosomal dominant 7 germline 21 37493164 GGAGAACCTCTGTTCAGTGGTGCCAATGAGGTAAATGATGTATTGCTTTACAAATTCTGTT 66512766 103234 NM_000531.5(OTC):c.867+1G>A OTC - MedGen:CN517202 not provided unknown X 38409026 GCTTTCCAAGGTTACCAGGTTACAATGAAGGTACAAATTGATGCCTCTCTGAAGGTTCATT 387906820 39172 NM_005257.5(GATA6):c.1399G>A (p.Ala467Thr) GATA6 Dec 11, 2011 MedGen:C1838780,OMIM:600001 Pancreatic agenesis and congenital heart disease germline 18 22181549 AGAAACGCCGAGGGTGAACCCGTGTGCAATGCTTGTGGACTCTACATGAAACTCCATGGGG 121912796 32593 NM_001822.5(CHN1):c.682G>A (p.Gly228Ser) CHN1 Aug 08, 2008 MedGen:C0751083,OMIM:604356 Duane syndrome type 2 germline 2 174824464 TGGTGTGAATACTGTGCCAACTTTATGTGGGGTCTCATTGCTCAGGGAGTGAAATGTGCAG 762081862 205374 NM_001244189.1(KIAA0586):c.1815G>A (p.Gln605=) KIAA0586 Aug 06, 2015 MedGen:C4225286,OMIM:616546 Short-rib thoracic dysplasia 14 with polydactyly germline 14 58458545 ATGGATTAAAACTATTTCTGCAGAAATTCAGGTATGTCTTGGAAAAAAACTGAAAATTAAG 121434548 32661 NM_000070.2(CAPN3):c.1469G>A (p.Arg490Gln) CAPN3;POMT1 Jun 14, 2016 MedGen:CN239245;MedGen:C1869123,OMIM:253600,Orphanet:ORPHA267 CAPN3-Related Disorders;Limb-girdle muscular dystrophy, type 2A germline 15 42401755 TCCTGGTGGCCCTGATGCAGAAGAACCGGCGGAAGGACCGGAAGCTAGGGGCCAGTCTCTT 794728029 197392 NM_001613.2(ACTA2):c.809G>A (p.Gly270Glu) ACTA2 Aug 27, 2014 MedGen:CN517202 not provided germline 10 88938242 TAAGGACCATGGCCTGTGTCTCTTTTCCAGGGATGGAGTCTGCTGGCATCCATGAAACCAC 267607163 22003 NM_006086.3(TUBB3):c.904G>A (p.Ala302Thr) TUBB3 Aug 15, 2017 MedGen:C2748801,OMIM:600638;MedGen:CN517202 Fibrosis of extraocular muscles, congenital, 3a, with or without extraocular involvement;not provided germline 16 89935355 CAGATGTTCGATGCCAAGAACATGATGGCCGCCTGCGACCCGCGCCACGGCCGCTACCTGA 587778810 76807 NM_000784.3(CYP27A1):c.779G>A (p.Trp260Ter) CYP27A1 Aug 01, 2013 MedGen:C0238052,OMIM:213700,Orphanet:ORPHA909,SNOMED CT:63246000 Cholestanol storage disease not provided 2 218812684 ACTCACTCTATGCCACCTTCCTCCCCAAGTGGACTCGCCCCGTGCTGCCTTTCTGGAAGCG 1060501048 400634 NM_000138.4(FBN1):c.6164-1G>A FBN1 Jun 17, 2016 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006 Marfan syndrome germline 15 48437918 AACTGAAGGGTGTCATAAATTTATGCTGCAGATTTGCGAATGAGCTACTGTTATGCGAAGT -1 442168 NM_000435.2(NOTCH3):c.437G>A (p.Cys146Tyr) NOTCH3 Mar 05, 2015 MedGen:CN517202 not provided germline 19 15192202 TGGGGCCCGATGGACGCTTCCTCTGCTCCTGCCCACCTGGCTACCAGGGCCGCAGCTGCCG 879253954 245013 NM_000304.3(PMP22):c.449G>A (p.Gly150Asp) PMP22 Jan 04, 2017 MedGen:CN517202 not provided germline 17 15230951 GGGTGGCCTTCCCCCTGGCCCTTCTCAGCGGTGTCATCTATGTGATCTTGCGGAAACGCGA 794728746 196622 NM_001035.2(RYR2):c.6916G>A (p.Val2306Ile) RYR2 Mar 13, 2016 MedGen:C1631597,Orphanet:ORPHA3286 Catecholaminergic polymorphic ventricular tachycardia germline 1 237638480 GAGAGATATCTTGACTTTCTTAGATTTGCTGTCTTCTGTAATGGTAGGACTTGATTTCTTG 397515462 76940 NM_003850.2(SUCLA2):c.751G>A (p.Asp251Asn) SUCLA2 Aug 01, 2013 MedGen:C2749864,OMIM:612073,Orphanet:ORPHA1933 Mitochondrial DNA depletion syndrome 5 (encephalomyopathic with or without methylmalonic aciduria) germline 13 47968646 GTCAAGCTTTACAGCCTTTTTCTGAAATACGATGCAACCATGATAGAAATAAATCCAATGG -1 442156 NM_000435.2(NOTCH3):c.671G>A (p.Cys224Tyr) NOTCH3 Jul 09, 2014 MedGen:CN517202 not provided germline 19 15191968 AGAGTGGCGACCTCACTTACGACTGTGCCTGTCTTCCTGGTGAGTGAGCCCTACTCAGGAG 200669099 240612 NM_012144.3(DNAI1):c.1644G>A (p.Trp548Ter) DNAI1 Mar 05, 2016 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244 Ciliary dyskinesia germline 9 34514468 CCACAACATGTCAGTGGACACTGTGTCCTGGAACCCATACCACACCAAGGTCTTCATGTCC 886041383 264917 NM_001848.2(COL6A1):c.842G>A (p.Gly281Glu) COL6A1 Jul 27, 2016 MedGen:CN517202 not provided germline 21 45989121 GAGGCAAGCCGGGGCTCCCAGGAGAGAAGGGAGAAGCCGGAGATCCTGTGAGTGCCTGACT 764260414 359016 NM_006412.3(AGPAT2):c.299G>A (p.Ser100Asn) AGPAT2 Dec 08, 2016 MedGen:C1720862,OMIM:608594 Congenital generalized lipodystrophy type 1 germline 9 136677440 GTCCCTGTGTCATCGTCTCCAACCACCAGAGCATCCTGGACATGATGGGTAGGCCGGGCCT 397515447 65581 NM_005006.6(NDUFS1):c.1855G>A (p.Asp619Asn) NDUFS1 Jul 01, 2010 MedGen:C1838979,OMIM:252010 Mitochondrial complex I deficiency germline 2 206127826 GCAGTGACACCTCCTGGCTTGGCAAGAGAAGACTGGAAAATTATAAGAGCACTCTCTGAGG 137852706 23871 NM_000336.2(SCNN1B):c.109G>A (p.Gly37Ser) SCNN1B Mar 03, 1997 MedGen:C1449843,OMIM:264350,Orphanet:ORPHA171876 Pseudohypoaldosteronism type 1 autosomal recessive germline 16 23348708 GTGTGGTACTGCGACAACACCAACACCCACGGCCCCAAGCGCATCATCTGTGAGGGGCCCA 1085308040 416953 NM_000314.6(PTEN):c.1004G>A (p.Arg335Gln) PTEN Mar 01, 2017 MedGen:C1959582,OMIM:601728,Orphanet:ORPHA306498 PTEN hamartoma tumor syndrome paternal 10 87961096 TTGACAAAGCAAATAAAGACAAAGCCAACCGATACTTTTCTCCAAATTTTAAGGTCAGTTA 121913664 29043 NM_020529.2(NFKBIA):c.32G>A (p.Trp11Ter) NFKBIA Oct 01, 2007 MedGen:C2677481,OMIM:612132 Ectodermal dysplasia, anhidrotic, with T-cell immunodeficiency, autosomal dominant germline 14 35404613 TGTTCCAGGCGGCCGAGCGCCCCCAGGAGTGGGCCATGGAGGGCCCCCGCGACGGGCTGAA 786205099 31944 NM_000941.2(POR):c.731+1G>A POR Mar 01, 2004 MedGen:C1860042,OMIM:201750 Antley-Bixler syndrome with genital anomalies and disordered steroidogenesis germline 7 75981607 TGGGGTGGAAGCCACTGGCGAGGAGTCCAGGTGAGCAAGTGCCCGCAGGTGCGGTGGGTGG 886041277 264226 NM_003060.3(SLC22A5):c.395G>A (p.Trp132Ter) SLC22A5 Oct 27, 2017 MedGen:CN517202 not provided germline 5 132378379 ATGATACACCCCCTTTGCTCATCTTGCAGTGGAACCTGGTGTGTGAGGACGACTGGAAGGC 1057518666 361277 NM_001854.3(COL11A1):c.2754+5G>A COL11A1 Mar 30, 2017 MedGen:C1858084,OMIM:604841,Orphanet:ORPHA90654;MedGen:CN517202 Stickler syndrome, type 2;not provided germline 1 102978703 GCCCTCCTGGCCCTCCAGGTGAAAGAGTACGTATGATACAGCCACATAATATAAAATGAAA 121909180 22709 NM_000453.2(SLC5A5):c.1183G>A (p.Gly395Arg) SLC5A5 Sep 01, 1999 MedGen:C1848805,OMIM:274400 Thyroid dyshormonogenesis 1 germline 19 17882160 CCATCCTCATCCACTACAGCACTCATCTACGGATCGGCCTGTCTCACCGTGGCAGCCCTGT -1 482227 NM_001184880.1(PCDH19):c.2147+1G>A PCDH19 Nov 08, 2017 MedGen:CN517202 not provided germline X 100406450 CAACAAAGAGATCCGGACCTACAACTGCAGGTAAAGCCAAGTTTTCTTTCTTTGTCTTGGA 121909196 22974 NM_000503.5(EYA1):c.1319G>A (p.Arg440Gln) EYA1 May 19, 2011 MedGen:C0265234,OMIM:113650,Orphanet:ORPHA107,SNOMED CT:290006 Melnick-Fraser syndrome germline 8 71216733 GGATGAGAAAGTTGGCCTTCCGCTACAGACGGGTAAAAGAGATCTACAACACCTACAAAAA 387907016 39754 NM_001199799.1(ILDR1):c.3G>A (p.Met1Ile) ILDR1 Feb 11, 2011 MedGen:C1864818,OMIM:609646 Deafness, autosomal recessive 42 germline 3 122022075 AGCTGAAAAGGGCCAGAAAGGGGGCGGCATGGCATGGCCCAAACTGCCCGCACCTTGGCTG 111033556 32521 NM_000493.3(COL10A1):c.1832G>A (p.Trp611Ter) COL10A1 Feb 01, 2003 MedGen:C0265289,OMIM:156500,Orphanet:ORPHA174,SNOMED CT:29248006 Metaphyseal chondrodysplasia, Schmid type germline 6 116120284 ACCACGTGCATGTGAAAGGGACTCATGTTTGGGTAGGCCTGTATAAGAATGGCACCCCTGT 104894829 25755 NM_000169.2(GLA):c.131G>A (p.Trp44Ter) GLA Nov 01, 1990 Human Phenotype Ontology:HP:0001071,MedGen:C0002986,OMIM:301500,Orphanet:ORPHA324,SNOMED CT:16652001 Fabry disease germline X 101407773 ATGGATTGGCAAGGACGCCTACCATGGGCTGGCTGCACTGGGAGCGCTTCATGTGCAACCT 1085307454 415571 NM_000088.3(COL1A1):c.1076G>A (p.Gly359Glu) COL1A1 May 03, 2017 MedGen:CN517202 not provided germline 17 50195646 TTCTGATTCAGGGTGAAGCTGGTCCCCAAGGGCCCCGAGGCTCTGAAGGTCCCCAGGGTGT 111422676 223822 NM_000169.2(GLA):c.1088G>A (p.Arg363His) GLA Jul 05, 2017 Human Phenotype Ontology:HP:0001071,MedGen:C0002986,OMIM:301500,Orphanet:ORPHA324,SNOMED CT:16652001 Fabry disease germline X 101398011 TGATAAACCGGCAGGAGATTGGTGGACCTCGCTCTTATACCATCGCAGTTGCTTCCCTGGG 104893787 28074 NM_000539.3(RHO):c.329G>A (p.Cys110Tyr) RHO May 15, 1994 MedGen:C3151001,OMIM:613731 Retinitis pigmentosa 4 germline 3 129529062 ATGGATACTTCGTCTTCGGGCCCACAGGATGCAATTTGGAGGGCTTCTTTGCCACCCTGGG 137854477 31492 NM_000138.4(FBN1):c.2954G>A (p.Gly985Glu) FBN1 Sep 01, 1999 MedGen:C4016055 Marfan syndrome, atypical germline 15 48489979 ACCGCATGGACGCCTGCTGCTGCTCCGTCGGGGCAGCCTGGGGTACTGAGGAATGCGAGGA 587777168 106653 NM_012414.3(RAB3GAP2):c.1434G>A (p.Trp478Ter) RAB3GAP2 May 01, 2013 MedGen:C3280214,OMIM:614225 Warburg micro syndrome 2 germline 1 220191121 TGCGCCAAGAAGGGGAATTTTAGAAGTGTGGAGCACACAGCAGGGACCTAGAGTAGGAGCT 878852996 236957 NM_001080463.1(DYNC2H1):c.11671-1G>A DYNC2H1 Mar 13, 2015 MedGen:CN517202 not provided germline 11 103316544 TTGTTTACTTAAAAAAATTGTTTTTTGACAGGGTTGGACAAAGTTTTATGAATTTTCTTTA 80359803 67339 NM_000059.3(BRCA2):c.8754G>A (p.Glu2918=) BRCA2 Jul 13, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline 13 32376791 GAAGAATGCAGCAGACCCAGCTTACCTTGAGGTGAGAGAGTAAGAGGACATATAATGAGGC 1057518754 359189 NM_024854.4(PYROXD1):c.414+1G>A PYROXD1 Dec 19, 2016 MedGen:C4310645,OMIM:617258 Myopathy, myofibrillar, 8 germline 12 21449692 TTAGGAATCCGTGATACAGACAGTGCTCAGGTAACATTTTAAGGTTGGATCGTGAGAAGGA 62642573 105145 NM_000350.2(ABCA4):c.4195G>A (p.Glu1399Lys) ABCA4 Jan 01, 2016 MeSH:C535804,MedGen:C1855465,OMIM:248200;MedGen:CN517202 Stargardt disease 1;not provided germline 1 94031054 ATGCTTTCTATTGTTATCCCTCCTTTTGGCGAATACCCCGCTTTGACCCTTCACCCCTGGA 121909661 31287 NM_000145.3(FSHR):c.1255G>A (p.Ala419Thr) FSHR Mar 01, 2002 MedGen:C0949595,OMIM:233300 Ovarian dysgenesis 1 germline 2 48963566 CTCTGCATTGGAATCTACCTGCTGCTCATTGCATCAGTTGATATCCATACCAAGAGCCAAT 267606631 33361 NM_001614.3(ACTG1):c.721G>A (p.Glu241Lys) ACTG1 Jul 23, 2013 MedGen:C1858172,OMIM:604717;MedGen:CN043648,Orphanet:ORPHA87884;MedGen:CN517202 Deafness, autosomal dominant 20;Nonsyndromic hearing loss and deafness;not provided germline 17 81511269 GCATCCTCCTCTTCTCTGGAGAAGAGCTACGAGCTGCCCGATGGCCAGGTCATCACCATTG 587777180 106803 NM_006767.3(LZTR1):c.1397G>A (p.Arg466Gln) LZTR1 Mar 04, 2014 MedGen:C3810283,OMIM:615670 Schwannomatosis 2 unknown 22 20993967 TGCAGGGCCACGTAGCCATTGTCACAGCGCGGAGCCGCTGGCTTCGCAGGAAGATCACGCA 367543268 36663 NM_000155.3(GALT):c.1060-1G>A GALT Aug 24, 2015 MedGen:C0268151,OMIM:230400,Orphanet:ORPHA79239,SNOMED CT:124354006 Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase germline 9 34650368 CCTCCTTAATTGCTCCCTGTCCCTTTTCCAGGCTGCAGAGAGACTAAGGGCACTTCCTGAG 111033190 53933 NM_004004.5(GJB2):c.95G>A (p.Arg32His) GJB2 Aug 03, 2016 MedGen:C2675750,OMIM:601544;MedGen:C2673759,OMIM:220290;MedGen:CN043648,Orphanet:ORPHA87884 Deafness, autosomal dominant 3a;Deafness, autosomal recessive 1A;Nonsyndromic hearing loss and deafness germline;unknown 13 20189487 AGATCTGGCTCACCGTCCTCTTCATTTTTCGCATTATGATCCTCGTTGTGGCTGCAAAGGA 104894355 28526 NM_000217.2(KCNA1):c.1210G>A (p.Val404Ile) KCNA1 Oct 01, 2000 MedGen:C1719788,OMIM:160120,Orphanet:ORPHA37612,SNOMED CT:421182009 Episodic ataxia type 1 germline 12 4912588 ATCGCTGGTGTGCTAACAATTGCCCTGCCCGTACCTGTCATTGTGTCCAATTTCAACTATT 587777821 19026 NM_017739.3(POMGNT1):c.1413+1G>A POMGNT1 Oct 01, 2004 na Congenital muscular dystrophy-dystroglycanopathy with brain and eye anomalies, type A3 germline 1 46192307 CTTGAGCCCAAGTGGCCTACACCGGAAAAGGTAACTGTCAGGGTAGGGTGAGGGGGCTGGA 1085307274 414216 NM_001204.6(BMPR2):c.932G>A (p.Gly311Glu) BMPR2 - MedGen:C0152171,OMIM:178600,SNOMED CT:26174007 Primary pulmonary hypertension germline 2 202520166 CTTGCCGTCTTGCTCATTCTGTTACTAGAGGACTGGCTTATCTTCACACAGAATTACCACG 886040734 261439 NM_000059.3(BRCA2):c.7887G>A (p.Trp2629Ter) BRCA2 Oct 18, 2016 MedGen:C2675520,OMIM:612555 Breast-ovarian cancer, familial 2 germline 13 32362604 GGTTTATAATCACTATAGATGGATCATATGGAAACTGGCAGCTATGGAATGTGCCTTTCCT 754201976 265114 NM_000044.4(AR):c.1847G>A (p.Arg616His) AR Aug 05, 2017 MedGen:C0039585,OMIM:300068,SNOMED CT:12313004;MedGen:CN517202 Androgen resistance syndrome;not provided germline X 67686088 AATTCCGAAGGAAAAATTGTCCATCTTGTCGTCTTCGGAAATGTTATGAAGCAGGGATGAC 121913112 31393 NM_000142.4(FGFR3):c.1537G>A (p.Asp513Asn) FGFR3 Apr 01, 2006 MedGen:C0265269,OMIM:149730,SNOMED CT:23817003 Levy-Hollister syndrome germline 4 1805561 TGACACAGGCCCCCCGCTCCGTGCACAGACGATGCCACTGACAAGGACCTGTCGGACCTGG 121965015 15288 NM_000398.6(CYB5R3):c.611G>A (p.Cys204Tyr) CYB5R3 May 01, 2008 MedGen:C2749559 Methemoglobinemia, type I germline 22 42627326 TCATGAAGGACCCTGATGACCACACTGTGTGCCACCTGCTCTTTGCCAACCAGGTCAGTGG -1 214857 NM_016218.3(POLK):c.1345G>A (p.Glu449Lys) POLK Aug 14, 2013 Human Phenotype Ontology:HP:0012125,MedGen:C0376358,OMIM:176807,SNOMED CT:399068003 Malignant tumor of prostate somatic 5 75590429 TGCAGTGAGCTTGCTCAGGATCTACAGAAAGAAAGACTTAAGGTGCTTTATTTTGATATGG 387907324 38636 NM_000782.4(CYP24A1):c.964G>A (p.Glu322Lys) CYP24A1 Nov 09, 2011 MedGen:C0268080,OMIM:143880,SNOMED CT:34225008 Idiopathic hypercalcemia of infancy germline 20 54162743 TCAAAGAAAGAATTGTATGCTGCTGTCACAGAGCTCCAGCTGGCTGCGGTGGAAACGGTAA 386134133 51221 NM_000096.3(CP):c.2962G>A (p.Gly988Ser) CP Nov 05, 2015 MedGen:C0878682,OMIM:604290,Orphanet:ORPHA48818,SNOMED CT:124224004 Deficiency of ferroxidase germline 3 149177896 GATGAAGTCAACTGGTATCTGATGGGAATGGGCAATGAAATAGACTTACACACTGTACATT 1060499795 389223 NM_032119.3(ADGRV1):c.10426G>A (p.Gly3476Arg) ADGRV1 Jun 04, 2016 MedGen:C1854237,OMIM:605472 Usher syndrome, type 2C germline 5 90728933 TACCTAATATTTGCCGAAAATGTCTTTCTAGGTGAGAAGATAAAGTATTTGTAGTGTATAT 199474829 24701 m.7896G>A MT-CO2 Sep 01, 2001 MedGen:C0268237,OMIM:220110,Orphanet:ORPHA254905,SNOMED CT:67434000 Hepatic failure, early-onset, and neurologic disorder due to cytochrome C oxidase deficiency germline MT 7896 CCCTTACCATCAAATCAATTGGCCACCAATGGTACTGAACCTACGAGTACACCGACTACGG 794727740 195052 NM_172107.3(KCNQ2):c.793G>A (p.Ala265Thr) KCNQ2 Sep 14, 2017 MedGen:C1852587,OMIM:121200;MedGen:C0393706,Orphanet:ORPHA1934;MedGen:C3150986,OMIM:613720,Orphanet:ORPHA439218;Human Phenotype Ontology:HP:0001250,MedGen:C0036572;MedGen:CN517202 Benign familial neonatal seizures 1;Early infantile epileptic encephalopathy;Early infantile epileptic encephalopathy 7;Seizures;not provided de novo;germline 20 63442429 AAGGGGGAGAACGACCACTTTGACACCTACGCGGATGCACTCTGGTGGGGCCTGGTGAGTT 121913488 31313 NM_004119.2(FLT3):c.2503G>A (p.Asp835Asn) FLT3 Oct 02, 2014 Human Phenotype Ontology:HP:0004808,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:ORPHA519,SNOMED CT:17788007 Acute myeloid leukemia somatic 13 28018505 GTGAAGATATGTGACTTTGGATTGGCTCGAGATATCATGAGTGATTCCAACTATGTTGTCA 104886063 35641 NM_000495.4(COL4A5):c.611G>A (p.Gly204Asp) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108577953 TTATTTTCTCTTTTGTCTTCTCTTCTTAGGGCCCTCCTGGTCCACCAGGACTTCCAGGACC 121912834 32475 NM_000094.3(COL7A1):c.6752G>A (p.Gly2251Glu) COL7A1 May 01, 2007 MedGen:C2675780;MedGen:C1843761,OMIM:607523;MedGen:C1851573,OMIM:131705,Orphanet:ORPHA79411 Epidermolysis bullosa pruriginosa, autosomal dominant;Nail disorder, nonsyndromic congenital, 8;Transient bullous dermolysis of the newborn germline 3 48572941 GCAGCCCTGACAGAGCTCTTCCCTCTCAGGGGGAGACAGGGAAGCCGGGAGCCCCAGGTCG 121918569 28197 NM_000448.2(RAG1):c.2333G>A (p.Arg778Gln) RAG1 Mar 14, 2017 MedGen:C2673536,OMIM:233650,Orphanet:ORPHA157949;MedGen:CN517202 Combined cellular and humoral immune defects with granulomas;not provided germline 11 36575637 ACCATGAGTCTGTGGAAGAACTGCGGGATCGGGTGAAAGGGGTCTCAGCTAAACCTTTCAT 74315408 28444 NM_000311.4(PRNP):c.538G>A (p.Val180Ile) PRNP Mar 18, 2016 MedGen:C0162534,Orphanet:ORPHA56970;MedGen:C0022336,OMIM:123400,Orphanet:ORPHA204,SNOMED CT:792004 Genetic prion diseases;Jakob-Creutzfeldt disease germline 20 4699758 AGCAACCAGAACAACTTTGTGCACGACTGCGTCAATATCACAATCAAGCAGCACACGGTCA 199422230 25534 NM_000202.7(IDS):c.1425G>A (p.Trp475Ter) IDS Aug 01, 1992 MedGen:C0026705,OMIM:309900,SNOMED CT:70737009 Mucopolysaccharidosis, MPS-II germline X 149482974 GTATCCCCGGCCTTCAGACATCCCTCAGTGGAATTCTGACAAGCCGAGTTTAAAAGATATA 1064793859 411073 NM_000061.2(BTK):c.894+1G>A BTK Aug 13, 2015 MedGen:CN517202 not provided germline X 101359292 AGTCAGGCTGAGCAACTGCTAAAGCAAGAGGTAAGTGTGGAACCACTAGCACACAGCATTC 137852830 15548 NM_001142446.1(ANK1):c.5286G>A (p.Trp1762Ter) ANK1 May 01, 1998 MedGen:C2674218,OMIM:182900 Spherocytosis type 1 germline 8 41668498 ATACCTGCAAGATGCTGCACAAGGTTCCTGGCAAGAGGAGGTCACGCAAGGTCCACACTCA 864321648 217184 NM_004387.3(NKX2-5):c.391G>A (p.Glu131Lys) NKX2-5 Nov 02, 2012 MedGen:C0152021,SNOMED CT:13213009 Congenital heart disease de novo 5 173233153 GAGCTGGAGAAGACAGAGGCGGACAACGCGGAGCGGCCCCGGGCGCGACGGCGGAGGAAGC 767176610 434381 NM_052988.4(CDK10):c.609-1G>A CDK10 Sep 29, 2017 MedGen:CN502749,OMIM:617694 AL KAISSI SYNDROME germline 16 89694172 GCTGTATTGAGGTGGGTGCTTCTGTGTGTAGGTACCGAGCCCCTGAACTGCTGTTGGGAAC 80338950 38617 NM_004004.5(GJB2):c.551G>A (p.Arg184Gln) GJB2 May 09, 2017 MedGen:C2675750,OMIM:601544;Human Phenotype Ontology:HP:0000365,MedGen:C0018772;MedGen:CN517202 Deafness, autosomal dominant 3a;Hearing impairment;not provided germline 13 20189031 GTCCCAACACTGTGGACTGCTTTGTGTCCCGGCCCACGGAGAAGACTGTCTTCACAGTGTT 121912919 106876 NM_000090.3(COL3A1):c.907G>A (p.Gly303Arg) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188991678 TATTTCAATTTTACTCTGTAGGGTCCAAGAGGGGCTCCTGGTGAGCGAGGACGGCCAGGAC 587783846 169959 NM_000252.2(MTM1):c.64-1G>A MTM1 Feb 08, 2013 MedGen:C0410203,OMIM:310400,Orphanet:ORPHA596,SNOMED CT:46804001 Severe X-linked myotubular myopathy germline X 150596497 ATTACTTCTGATGCATCTGTTTTGTTTCTAGACGTCTCGAGATGGAGTCAATCGAGATCTC 794728401 197156 NM_000238.3(KCNH2):c.3002G>A (p.Trp1001Ter) KCNH2 Mar 04, 2016 MeSH:D008133,MedGen:C0023976,SNOMED CT:9651007;MedGen:CN517202 Long QT syndrome;not provided germline 7 150947478 TCTCAGGAGTGTCCAACATTTTCAGCTTCTGGGGGGACAGTCGGGGCCGCCAGTACCAGGA 193204571 440107 NM_018051.4(WDR60):c.2305G>A (p.Glu769Lys) WDR60 Jun 01, 2017 MedGen:C0265275,Orphanet:ORPHA474,SNOMED CT:75049004;MedGen:CN674505 Jeune thoracic dystrophy;Short-rib polydactyly syndrome type III unknown 7 158926234 GTAAACCACCGAAGCCCTCTTCAAGCAGTAGAACCTATCTCAACGTCCGTCCACAAAAAGC 875989783 227700 NM_177438.2(DICER1):c.4050+1G>A DICER1 Jul 15, 2014 MedGen:C0027672,SNOMED CT:699346009;Human Phenotype Ontology:HP:0030408,MedGen:C0205898,Orphanet:ORPHA251909 Hereditary cancer-predisposing syndrome;Pineoblastoma germline 14 95103345 GGCCGCCTTTCATATATGAGAAGCAAAAAGGTAAGAGATGATTTTTTTATTTTGAGCAGTT 1064793922 407790 NM_000264.4(PTCH1):c.590G>A (p.Trp197Ter) PTCH1 Feb 06, 2017 MedGen:C0004779,OMIM:109400,Orphanet:ORPHA377,SNOMED CT:69408002;MedGen:CN517202 Gorlin syndrome;not provided germline 9 95482198 TTGTCTCTGCTTTTCATTTTATTAGGCAGTGGAAATTGGAACATTTGTGTTACAAATCAGG 113994205 19482 NM_004937.2(CTNS):c.414G>A (p.Trp138Ter) CTNS Jun 27, 2016 MedGen:C0010690,OMIM:219800 Nephropathic cystinosis germline;unknown 17 3655305 GGTGATTGGCTGGATCTACTTTGTGGCCTGGTCCATCTCCTTCTACCCTCAGGTGATCATG 104894755 25885 NM_000054.4(AVPR2):c.602G>A (p.Gly201Asp) AVPR2 Nov 01, 1997 MedGen:C1563705,OMIM:304800 Nephrogenic diabetes insipidus, X-linked germline X 153906108 ACTGCTGGGCCTGCTTTGCGGAGCCCTGGGGCCGTCGCACCTATGTCACCTGGATTGCCCT -1 485738 NM_000163.4(GHR):c.945G>A (p.Lys315=) GHR Jan 04, 2018 MedGen:C0271568,OMIM:262500,Orphanet:ORPHA633,SNOMED CT:38196001 Laron-type isolated somatotropin defect germline 5 42718121 GATTAAAGGAATCGATCCAGATCTCCTCAAGGTAACTAATAATTTTATCTAAATTGTAGCT 121908942 21775 NM_006892.3(DNMT3B):c.1987G>A (p.Gly663Ser) DNMT3B Nov 11, 1999 MedGen:C0398788,OMIM:242860,SNOMED CT:234633000 Centromeric instability of chromosomes 1,9 and 16 and immunodeficiency germline 20 32800916 GATCTCTCAAATGTGAATCCAGCCAGGAAAGGCCTGTATGGTGAGCATCCTTCTCTCTGGC 267606743 33502 NM_001845.5(COL4A1):c.1528G>A (p.Gly510Arg) COL4A1 Apr 28, 2017 MedGen:C2673195,OMIM:611773,Orphanet:ORPHA73229;MedGen:C1867327,OMIM:180000,Orphanet:ORPHA75326 Angiopathy, hereditary, with nephropathy, aneurysms, and muscle cramps;Retinal arteries, tortuosity of not provided 13 110192222 AGAGGTTTGCCTGGCAGAGATGGTGTTGCAGGAGTGCCAGTAAGTAAACCTGTCTGAGTTC 140366557 482290 NM_052873.2(IFT43):c.100G>A (p.Glu34Lys) IFT43 Feb 08, 2018 MedGen:CN802781,OMIM:617871 RETINITIS PIGMENTOSA 81 germline 14 75988930 CGCCGAGCTCAACAGGAGTCAGCGCAGGCCGAGAATCACCTCAATGGCAAGAATTCCTCTT 67839036 103180 NM_000531.5(OTC):c.664-1G>A OTC - MedGen:CN517202 not provided unknown X 38408741 CTAAATAAGATTTAAATTCTTCCTCCTTTAGGGTTATGAGCCGGATGCTAGTGTAACCAAG 80359864 16778 NM_001017420.2(ESCO2):c.1269G>A (p.Trp423Ter) ESCO2 Oct 02, 2008 MedGen:C0392475,OMIM:268300,OMIM:269000,SNOMED CT:48718006 Roberts-SC phocomelia syndrome germline 8 27791968 TGACCCTTTTGTTTTCCTTTGGCAGGGTTGGAAGAAAGAACGTGTAGTAGCAGAGTTTTGG 587778846 132344 NM_000321.2(RB1):c.1332+1G>A RB1 Sep 16, 2013 Human Phenotype Ontology:HP:0009919,MeSH:D012175,MedGen:C0035335,OMIM:180200,Orphanet:ORPHA790 Retinoblastoma somatic 13 48377035 GGACAGGGTTGTGTCGAAATTGGATCACAGGTAACTTGAATTCATTGTAATTCGTGGTACT 72648322 414012 NM_000088.3(COL1A1):c.1201G>A (p.Gly401Ser) COL1A1 - MedGen:C0268363,OMIM:166220,Orphanet:ORPHA216820,SNOMED CT:205497004 Osteogenesis imperfecta with normal sclerae, dominant form maternal 17 50195330 GCTCACGCCCTGGCTGTCTGCCTCCCACAGGGTGCTCCTGGTATTGCTGGTGCTCCTGGCT 549095193 389255 NM_001039141.2(TRIOBP):c.3055G>A (p.Gly1019Arg) TRIOBP Jun 04, 2016 MedGen:C1853276,OMIM:609823 Deafness, autosomal recessive 28 germline 22 37725611 CCCTCCCAGCCTCCATGTGCTGTGTGCATTGGGCACCGGGATGCCCCTCGAGCCTCTTCGC 104886057 35634 NM_000495.4(COL4A5):c.593G>A (p.Gly198Glu) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108575956 CTGGTATACCAGGGCCAATTGGTCCCCCAGGACCACCAGGTTTGATGGTAAGCTCTCTTCT 879255558 227931 NM_001031710.2(KLHL7):c.1115G>A (p.Arg372Gln) KLHL7 Jul 28, 2016 MedGen:C1848947,OMIM:272430;MedGen:C4310742,OMIM:617055 Cold-induced sweating syndrome 1;Cold-induced sweating syndrome 3 germline;inherited 7 23165876 GGTATTCGAAACTGGGTCCTCCGACACCTCGAGACAGCCTTGCTGCATGTGCTGCAGAAGG 121434274 18627 NM_000016.5(ACADM):c.799G>A (p.Gly267Arg) ACADM Jun 29, 2017 MedGen:C0220710,OMIM:201450,Orphanet:ORPHA42,SNOMED CT:128596003;MedGen:CN517202 Medium-chain acyl-coenzyme A dehydrogenase deficiency;not provided germline;unknown 1 75749509 GTGCCTAAAGAAAATGTTTTAATTGGTGACGGAGCTGGTTTCAAAGTTGCAATGGGAGCTT 121918693 27592 NM_001252634.1(THRB):c.959G>A (p.Arg320His) THRB Oct 12, 2012 MedGen:C2937288,OMIM:188570 Thyroid hormone resistance, generalized, autosomal dominant germline 3 24127684 TGGAGATCATGTCCCTTCGCGCTGCTGTGCGCTATGACCCAGAAAGTGAGACTTTAACCTT 863225033 213800 NM_001165963.1(SCN1A):c.3657G>A (p.Trp1219Ter) SCN1A Jul 17, 2013 MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002 Severe myoclonic epilepsy in infancy germline 2 166013792 GACGTGTTTCCGAATAGTTGAACATAACTGGTTTGAGACCTTCATTGTTTTCATGATTCTC -1 485840 NM_000044.4(AR):c.2086G>A (p.Asp696Asn) AR Mar 10, 2010 MedGen:C0039585,OMIM:300068,SNOMED CT:12313004 Androgen resistance syndrome germline X 67711602 GTGTGTGCTGGACACGACAACAACCAGCCCGACTCCTTTGCAGCCTTGCTCTCTAGCCTCA 778269655 186804 NM_000051.3(ATM):c.8307G>A (p.Trp2769Ter) ATM May 04, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0027672,SNOMED CT:699346009 Ataxia-telangiectasia syndrome;Hereditary cancer-predisposing syndrome germline;unknown 11 108343260 CCTCTCTCAGCGAAGTGGTGTTCTTGAATGGTGCACAGGAACTGTCCCCATTGGTGAATTT 587782114 151635 NM_000051.3(ATM):c.6326G>A (p.Trp2109Ter) ATM Oct 03, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline 11 108317500 ATTACCAAGCAGCATGGAGGAATATGCAGTGGGACCATTGCACTTCCGTCAGGTAAGAAAT 794728478 197296 NM_000238.3(KCNH2):c.1129-1G>A KCNH2 Sep 22, 2014 MedGen:CN517202 not provided germline 7 150952854 TCACCCACACCTCCGCCTTCCCCGGGTGCAGGTCCTGTCCCTGGGCGCCGACGTGCTGCCT 397515903 51702 NM_000256.3(MYBPC3):c.1458-1G>A MYBPC3 Aug 24, 2015 MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Primary familial hypertrophic cardiomyopathy;not provided germline 11 47342745 CACAGCACTTGCCACCCACCCACCCGGCTAGGCTGAAGGACGGGGTGGAGCTGACCCGGGA 119103236 17168 NM_005787.5(ALG3):c.512G>A (p.Arg171Gln) ALG3 Jul 01, 2005 MedGen:C1832736,OMIM:601110,Orphanet:ORPHA79321 Congenital disorder of glycosylation type 1D germline 3 184245291 CTTACCGTGTCCACTCCATCTTTGTGCTGCGGCTCTTCAATGACCCAGTGGCCATGGTGCT 111033720 36539 NM_000155.3(GALT):c.536G>A (p.Gly179Asp) GALT Dec 04, 2012 MedGen:C0268151,OMIM:230400,Orphanet:ORPHA79239,SNOMED CT:124354006 Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase not provided 9 34648143 AGATCTTTGAAAACAAAGGTGCCATGATGGGCTGTTCTAACCCCCACCCCCACTGCCAGGT 587783625 168576 NM_004456.4(EZH2):c.1876G>A (p.Val626Met) EZH2 Apr 09, 2014 MedGen:C0265210,OMIM:277590,SNOMED CT:63119004 Weaver syndrome de novo;germline 7 148811696 CTCTAGCATCTATTGCTGGCACCATCTGACGTGGCAGGCTGGGGGATTTTTATCAAAGATC 1135401953 424901 NM_000088.3(COL1A1):c.1247G>A (p.Gly416Asp) COL1A1 Oct 20, 2017 MedGen:C0023931,OMIM:166200,SNOMED CT:385482004;MedGen:CN517202 Osteogenesis imperfecta type I;not provided germline;unknown 17 50195284 CTGGTGCTCCTGGCTTCCCTGGTGCCCGAGGCCCCTCTGGACCCCAGGGCCCCGGCGGCCC 80357446 68866 NM_007294.3(BRCA1):c.131G>A (p.Cys44Tyr) BRCA1 Nov 11, 2016 MedGen:C2676676,OMIM:604370;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 1;Hereditary cancer-predisposing syndrome;not provided germline;unknown 17 43115729 CTGTCTCCACAAAGTGTGACCACATATTTTGCAAGTAAGTTTGAATGTGTTATGTGGCTCC 199476187 47867 NM_207352.3(CYP4V2):c.283G>A (p.Gly95Arg) CYP4V2 Apr 12, 2012 MedGen:C1859486,OMIM:210370,Orphanet:ORPHA41751 Bietti crystalline corneoretinal dystrophy not provided 4 186194568 CGCCACATGCCGCTGCTGAAGCTCTGGGTCGGGCCAGTGCCCATGGTGGCCCTTTATAATG 587776889 39757 NM_015506.2(MMACHC):c.609G>A (p.Trp203Ter) MMACHC Jul 13, 2017 MedGen:C1848561,OMIM:277400,Orphanet:ORPHA26 Methylmalonic acidemia with homocystinuria germline 1 45508975 CGAAGGCTTCAATTTCCACTGGCGTGATTGGACTTACCGGGATGCTGTGACACCCCAGGAG 397516740 53590 NM_002294.2(LAMP2):c.293G>A (p.Trp98Ter) LAMP2 Apr 06, 2017 MedGen:C0878677,OMIM:300257,Orphanet:ORPHA34587,SNOMED CT:419097006;MedGen:CN517202 Danon disease;not provided germline X 120455461 TAGCAGTGCAGTTCGGACCTGGCTTTTCCTGGATTGCGAATTTTACCAAGGCAGCATCTAC 1085307120 404686 NM_025009.4(CEP135):c.1473+1G>A CEP135 Mar 29, 2017 MedGen:C3553414,OMIM:614673 Primary autosomal recessive microcephaly 8 germline 4 55974970 AAAAGTTCAATATTTAGAACACCAGAAAAGGTAATGTCCCTTTATAAGAGTAGGCCAGAAA 193922258 441093 NM_000162.4(GCK):c.1020-1G>A GCK Jul 06, 2017 MedGen:CN517202 not provided germline 7 44145731 AGCGACCGCCCTACCTCCTCCCGCCCCGCAGCGACACGGGCGACCGCAAGCAGATCTACAA 1114167569 419619 NM_000038.5(APC):c.1958+1G>A APC Dec 29, 2016 MedGen:CN240755;MedGen:C0027672,SNOMED CT:699346009 Familial adenomatous polyposis;Hereditary cancer-predisposing syndrome germline 5 112835166 CAGCTTGATAGCTACAAATGAGGACCACAGGTATATATAGAGTTTTATATTACTTTTAAAG 377349459 150947 NM_000051.3(ATM):c.7913G>A (p.Trp2638Ter) ATM Aug 10, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Ataxia-telangiectasia syndrome;Hereditary cancer-predisposing syndrome;not provided germline;unknown 11 108332886 TTATATTAGCAAACTTAGATGCCACTCAGTGGAAGACTCAGAGAAGTATGTTTTTTTTAAA 1057517967 360415 NM_000267.3(NF1):c.669G>A (p.Trp223Ter) NF1 Oct 17, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline 17 31181724 GGTTCTTTATTTATAGGCATTTTGGAACTGGGTAGAAAATTATCCAGATGAATTTACAAAA 267607768 95759 NM_000249.3(MLH1):c.588+5G>A MLH1 Nov 03, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Lynch syndrome;not provided germline 3 37011867 CAGGCATTAGTTTCTCAGTTAAAAAAGTAAGTTCTTGGTTTATGGGGGATGGTTTTGTTTT 118204103 16482 NM_000190.3(HMBS):c.77G>A (p.Arg26His) HMBS Aug 01, 1993 MedGen:C0162565,OMIM:176000,Orphanet:ORPHA79276,SNOMED CT:234422006 Acute intermittent porphyria germline 11 119088298 CAAAGATGAGAGTGATTCGCGTGGGTACCCGCAAGAGCCAGGTGGGTGCAGGAGCCGGGGT 794728572 197477 NM_000218.2(KCNQ1):c.1176G>A (p.Trp392Ter) KCNQ1 Sep 26, 2011 MedGen:CN517202 not provided germline 11 2587617 TGCTGCCGAGAACCCCGACTCCTCCACCTGGAAGATCTACATCCGGAAGGCCCCCCGGAGC 730882122 181168 NM_004523.3(KIF11):c.790-1G>A KIF11 Feb 19, 2015 MedGen:C1835265,OMIM:152950,Orphanet:ORPHA2526 Microcephaly with or without chorioretinopathy, lymphedema, or mental retardation germline 10 92613376 TCACTTTTTATTTTTATTTTTAAAATTAAAGGTTGATCTTGCAGGAAGTGAAAACATTGGC 137853130 17556 NM_000346.3(SOX9):c.472G>A (p.Ala158Thr) SOX9 Jul 27, 2001 MedGen:C1842462 Campomelic dysplasia with autosomal sex reversal germline 17 72122759 GAGAGCGAGAAGCGGCCCTTCGTGGAGGAGGCGGAGCGGCTGCGCGTGCAGCACAAGAAGG 12406470 417642 NR_040073.1(MIR181A1HG):n.364-18748G>A MIR181A1HG - MedGen:C1879321,Orphanet:ORPHA98834 Acute myeloid leukemia with maturation germline 1 198826991 GTATAATGCTCAAACTGATCTTTAGCGCTGGACACTTGAGAGTTGACAATGTTTCTATGAT 1057524878 380178 NM_203446.2(SYNJ1):c.2528G>A (p.Trp843Ter) SYNJ1 Jan 17, 2018 MedGen:CN240908,OMIM:617389 Epileptic encephalopathy, early infantile, 53 germline 21 32657766 ACACCAGTGAAAAGTGCCGCACCCCTGCCTGGACAGACCGTGTCCTTTGGAGAAGGAGGAA 1064796916 405549 NM_032504.1(UNC80):c.6695G>A (p.Trp2232Ter) UNC80 Mar 20, 2017 MedGen:CN517202 not provided germline 2 209941467 ACCACCTCTTCTCTCTCAGCGGCTACCAGTGGATTCTCCCCACCATGCTGCAGGTGCCCAG -1 442117 NM_000435.2(NOTCH3):c.3011G>A (p.Cys1004Tyr) NOTCH3 Sep 12, 2016 MedGen:CN517202 not provided germline 19 15180812 TGCTTCCCCTCCAGACGCTGGTGGATTGGTGCAGCCGCCAGCCTTGTCAAAACGGGGGTCG 397514734 75257 NM_020435.3(GJC2):c.787G>A (p.Glu263Lys) GJC2 Jan 01, 2013 MedGen:C1837355,OMIM:608804,Orphanet:ORPHA280270 Leukodystrophy, hypomyelinating, 2 germline 1 228158545 GTGGTGGACTGCTTCGTGTCGCGCCCTACTGAAAAGACGGTCTTCCTGCTGGTTATGTACG 104894255 67810 NM_000218.2(KCNQ1):c.946G>A (p.Gly316Arg) KCNQ1 Jul 21, 2014 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MedGen:CN517202 Congenital long QT syndrome;not provided germline 11 2583459 CTGCAGGTCACAGTCACCACCATCGGCTATGGGGACAAGGTGCCCCAGACGTGGGTCGGGA 797044951 205294 NM_020988.2(GNAO1):c.736G>A (p.Glu246Lys) GNAO1 Jul 25, 2017 MeSH:D030342,MedGen:C0950123;MedGen:CN244050,OMIM:617493;MedGen:CN517202 Inborn genetic diseases;Neurodevelopmental disorder with involuntary movements;not provided germline 16 56351396 CCCTTCCTGCGGCCGCAGAACCGCATGCACGAGTCTCTCATGCTCTTCGACTCCATCTGTA 121434533 33205 NM_000262.2(NAGA):c.986G>A (p.Arg329Gln) NAGA Feb 01, 2001 MedGen:C1836522,OMIM:609242,Orphanet:ORPHA79280 Kanzaki disease germline 22 42061039 AGGAAAAATCTCTCATCGAAGTGTACATGCGGCCTCTGTCCAACAAGGCTAGCGCCTTAGT 864622273 221982 NM_000399.4(EGR2):c.1226G>A (p.Arg409Gln) EGR2 Oct 28, 2016 MedGen:C0751036,Orphanet:ORPHA65753,SNOMED CT:398040009;MedGen:CN517202 Charcot-Marie-Tooth disease, type I;not provided germline 10 62813412 CCTGTGACTACTGTGGCCGAAAGTTTGCCCGGAGTGATGAGAGGAAGCGCCACACCAAGAT 137852380 25202 NM_000132.3(F8):c.266G>A (p.Gly89Asp) F8 Jan 01, 1995 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154997095 TAACCTTTGGCGGACATCTCATTCTTACAGGTCTGCTAGGTCCTACCATCCAGGCTGAGGT 398123234 98492 NM_000181.3(GUSB):c.1084G>A (p.Asp362Asn) GUSB Jun 26, 2013 MedGen:C0085132,OMIM:253220,Orphanet:ORPHA584 Mucopolysaccharidosis type VII germline 7 65974686 GCTATCTCCTAGATCCGAGGGAAGGGCTTCGACTGGCCGCTGCTGGTGAAGGACTTCAACC 398123464 99137 NM_000532.4(PCCB):c.3G>A (p.Met1Ile) PCCB Sep 14, 2012 Human Phenotype Ontology:HP:0003353,MedGen:C0268579,OMIM:606054,Orphanet:ORPHA35 Propionic acidemia germline 3 136250378 CGGTAGGGGACGCGCCGGCACAGCAAAAATGGCGGCGGCATTACGGGTGGCGGCGGTCGGG 4884357 20271 NM_007375.3(TARDBP):c.892G>A (p.Gly298Ser) TARDBP Mar 12, 2015 MedGen:C2677565,OMIM:612069 Amyotrophic lateral sclerosis type 10 germline 1 11022301 GGATTTGGTAATAGCAGAGGGGGTGGAGCTGGTTTGGGAAACAATCAAGGTAGTAATATGG 397515512 76463 NM_000095.2(COMP):c.1813G>A (p.Asp605Asn) COMP Jul 25, 2013 MedGen:C1838280,OMIM:132400,Orphanet:ORPHA93308 Multiple epiphyseal dysplasia 1 not provided 19 18784997 GACTATGCGGGCTTCATCTTTGGCTACCAGGACAGCTCCAGCTTCTACGTGGTCATGTGGA 79555199 28838 NM_003990.4(PAX2):c.226G>A (p.Gly76Ser) PAX2 Mar 01, 2012 MedGen:C1852759,OMIM:120330,Orphanet:ORPHA1475,SNOMED CT:446449009 Renal coloboma syndrome germline 10 100750707 CGGCTTTCCCGGCGCAGGTACTACGAGACCGGCAGCATCAAGCCGGGTGTGATCGGTGGCT 753874439 373048 NR_003051.3(RMRP):r.147G>A RMRP Aug 02, 2017 MedGen:C1846796,Orphanet:ORPHA93347;MedGen:CN517202 Anauxetic dysplasia;not provided germline 9 35657872 AGACATTCCCCGCTTCCCACTCCAAAGTCCGCCAAGAAGCGTATCCCGCTGAGCGGCGTGG 552436294 408032 NM_001080463.1(DYNC2H1):c.5983G>A (p.Ala1995Thr) DYNC2H1 Sep 07, 2017 MedGen:C0265275,Orphanet:ORPHA474,SNOMED CT:75049004;MedGen:CN674505;MedGen:CN517202 Jeune thoracic dystrophy;Short-rib polydactyly syndrome type III;not provided germline;inherited;maternal;paternal;unknown 11 103177664 AAATCAACGCTTTGGAGAATGTTAAGGGCTGCGCTTTGTAAAACTGGCAAAGTAGTGAAAC 786202760 479157 NM_032043.2(BRIP1):c.1941G>A (p.Trp647Ter) BRIP1 Apr 13, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 17 61776557 TAATAATGACATATTCATATTCTAGGTTTGGGTTGGTACCATTGGGTCAGGCCCCAAGGGT 587779464 107010 NM_000090.3(COL3A1):c.755G>A (p.Gly252Asp) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188990317 TTTTCATTCATTATTTTTAGGGTATCAAAGGTCCAGCTGGGATACCTGGATTCCCTGGTAT 128626246 26294 NM_004006.2(DMD):c.3188G>A (p.Trp1063Ter) DMD Oct 04, 2016 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Duchenne muscular dystrophy germline X 32464674 TTCAGAATCACATACAAACCCTGAAGAAATGGATGGCTGAAGTTGATGTTTTTCTGAAGGA 1085307198 414130 NM_001204.6(BMPR2):c.255G>A (p.W85*) BMPR2 - MedGen:C0152171,OMIM:178600,SNOMED CT:26174007 Primary pulmonary hypertension germline 2 202467526 TTTGTATTCATATTGATTTATAGGATGTTGGTCTCACATTGGAGATCCCCAAGAGTGTCAC 863224499 213395 NM_000546.5(TP53):c.672+1G>A TP53 Apr 03, 2017 MedGen:C0085390,Orphanet:ORPHA524,SNOMED CT:428850001 Li-Fraumeni syndrome germline 17 7674858 AGTGTGGTGGTGCCCTATGAGCCGCCTGAGGTCTGGTTTGCAACTGGGGTCTCTGGGAGGA 137853111 16163 NM_015139.2(SLC35D1):c.932G>A (p.Trp311Ter) SLC35D1 Nov 01, 2007 MedGen:C0432194,OMIM:269250,Orphanet:ORPHA3144,SNOMED CT:254049009 Schneckenbecken dysplasia germline 1 67009112 TGGTCTTTGGTGGAGATTATATTTTCACGTGGACAAACTTCATTGGTTTAAATATCAGGTA 118204009 16708 NM_000785.3(CYP27B1):c.1166G>A (p.Arg389His) CYP27B1 Sep 20, 2016 MedGen:C0221468;MedGen:C0268689,OMIM:264700,Orphanet:ORPHA289157,SNOMED CT:67049004;MedGen:CN517202 Vitamin D-Dependent Rickets;Vitamin D-dependent rickets, type 1;not provided germline 12 57764147 GACTGTACCCTGTGGTACCTGGAAATTCTCGTGTCCCAGACAAAGACATTCATGTGGGTGA 397514746 75293 NM_001130089.1(KARS):c.1129G>A (p.Asp377Asn) KARS Jan 17, 2014 MedGen:C3151351,OMIM:613916 Deafness, autosomal recessive 89 germline 16 75631726 GAGTTCTACATGGCCTATGCAGACTATCACGATCTCATGGAAATCACGGAGAAGATGGTTT 1057518372 359446 NM_000090.3(COL3A1):c.897+1G>A COL3A1 Nov 15, 2016 MedGen:CN517202 not provided germline 2 188991532 CCAGGCGAAAATGGAGCTCCTGGACCCATGGTAATTATGTTTCTTATGTATAATTTTCAGT 146221660 213932 NM_016434.3(RTEL1):c.2957G>A (p.Arg986Gln) RTEL1 May 19, 2015 MedGen:C1800706,OMIM:178500,Orphanet:ORPHA79126,SNOMED CT:28168000;MedGen:C4225346,OMIM:616373 Idiopathic fibrosing alveolitis, chronic form;Pulmonary fibrosis and/or bone marrow failure, telomere-related, 3 germline;inherited 20 63693248 GTGGCTATCGGCCTGAGCACAGCATTCCCCGAAGGCAGCGGGCACAGCCGGTCCTGGACCC 121909098 22302 NM_005603.4(ATP8B1):c.2674G>A (p.Gly892Arg) ATP8B1 Mar 01, 1998 MedGen:C0268312,OMIM:211600,Orphanet:ORPHA172,SNOMED CT:74162007 Progressive intrahepatic cholestasis germline 18 57661207 AGGTACAAGAAAGCCATCACGCTGGCCATCGGAGATGGGGCCAATGACGTGAACATGATCA 1085307985 415405 NM_013382.5(POMT2):c.462G>A (p.Trp154Ter) POMT2 May 04, 2015 MedGen:CN517202 not provided germline 14 77304777 CCCACAGTTCTGTGCATTCCTTGGCTCCTGGCTGGTCCCCTTTGCCTACCTCACTGTACTG -1 443924 NM_020732.3(ARID1B):c.3862+1G>A ARID1B Sep 19, 2017 MedGen:CN517202 not provided germline 6 157190211 ACAAGGACCCCTTTGGGGGAATGAGAAAAGGTACGTGTAGAGGGGCCTCCACCCGGCCATG 118204098 16488 NM_000190.3(HMBS):c.446G>A (p.Arg149Gln) HMBS Aug 01, 1991 MedGen:C0162565,OMIM:176000,Orphanet:ORPHA79276,SNOMED CT:234422006 Acute intermittent porphyria germline 11 119090213 TGGGCAGTGTGGTGGGAACCAGCTCCCTGCGAAGAGCAGCCCAGCTGCAGAGAAAGTTCCC 779093807 375799 NM_016239.3(MYO15A):c.9876G>A (p.Trp3292Ter) MYO15A Jan 20, 2017 MedGen:CN517202 not provided germline 17 18166449 GGAGCAGGTGGACGGCGGCTACATGCTCTGGTTCCGGCGTGTGCTCTGGGATCAGCCACTC 786204241 186054 NM_138694.3(PKHD1):c.8303-1G>A PKHD1 Jan 27, 2015 MedGen:C0085548,OMIM:263200,Orphanet:ORPHA731,SNOMED CT:28770003 Autosomal recessive polycystic kidney disease germline 6 51791374 CATATCTGAGCAATTTCTTTTTCTTCCACAGACAGAACTGTCCTTGTGGATACAGATCTTC 1085307421 414401 NM_000020.2(ACVRL1):c.1324G>A (p.Val442Met) ACVRL1 - MedGen:C1832529 Pulmonary arterial hypertension related to hereditary hemorrhagic telangiectasia germline 12 51919062 GACCCCAGCTTTGAGGACATGAAGAAGGTGGTGTGTGTGGATCAGCAGACCCCCACCATCC 67828806 32387 NM_000088.3(COL1A1):c.572G>A (p.Gly191Asp) COL1A1 Mar 10, 2006 MedGen:C1852924 Oi/eds combined syndrome germline 17 50198177 AGGGTCCCTCTGGTCCTCGTGGTCTCCCTGGCCCCCCTGGTGCACCTGTGAGTATCCAGGA 199474778 242655 NM_000267.3(NF1):c.2352G>A (p.Trp784Ter) NF1 Feb 15, 2016 MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003 Neurofibromatosis, type 1 germline 17 31227549 TTAGGCTTGGGAAGATACACATGCAAAATGGGAACAAGCAACAAAGCTAATCCTTAACTAT 387906648 38739 NM_001242957.2(MAK):c.497G>A (p.Arg166His) MAK Aug 12, 2011 MedGen:C3280042,OMIM:614181 Retinitis pigmentosa 62 germline 6 10803886 CCTCTTTTGTTCTCTATTTTCATAGGTATCGTGCCCCTGAAGTTTTACTGAGATCTTCAGT 879254801 246004 NM_000527.4(LDLR):c.1130G>A (p.Cys377Tyr) LDLR Mar 25, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11111583 TCTGCGTGAACCTGGAGGGTGGCTACAAGTGCCAGTGTGAGGAAGGCTTCCAGCTGGACCC 80356662 23904 NM_000209.3(PDX1):c.532G>A (p.Glu178Lys) PDX1 Jul 05, 2011 MedGen:C1850096,OMIM:260370,Orphanet:ORPHA2805 Pancreatic agenesis, congenital germline 13 27924381 AACAAGTACATCTCACGGCCGCGCCGGGTGGAGCTGGCTGTCATGTTGAACTTGACCGAGA -1 444811 NM_000256.3(MYBPC3):c.2738-1G>A MYBPC3 Aug 09, 2016 MedGen:CN517202 not provided germline 11 47335210 TGTGGCCTTGCCTCCCCCTCCCCACCCCCAGGCTCAGAGTGGGTGGCTGCCCTGCAGGGGC 879254685 245805 NM_000527.4(LDLR):c.817+1G>A LDLR Nov 05, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline;inherited 19 11106688 ACATGAGCGATGAAGTTGGCTGCGTTAATGGTGAGCGCTGGCCATCTGGTTTTCCATCCCC 869320632 226736 NM_030805.3(LMAN2L):c.158G>A (p.Arg53Gln) LMAN2L Apr 01, 2016 MedGen:C4225168,OMIM:616887 Mental retardation, autosomal recessive 52 germline 2 96739883 GGGCGGGTCAAACGTTCGAGTACTTGAAACGGGAGCACTCGCTGTCGAAGCCCTACCAGGG 199472681 67707 NM_000218.2(KCNQ1):c.365G>A (p.Cys122Tyr) KCNQ1 Nov 26, 2013 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MedGen:CN517202 Congenital long QT syndrome;not provided germline 11 2445463 ACTTCCTCGAGCGTCCCACCGGCTGGAAATGCTTCGTTTACCACTTCGCCGTGTGAGTATC 587783096 166473 NM_139058.2(ARX):c.1141G>A (p.Ala381Thr) ARX Mar 13, 2014 MedGen:CN517202 not provided germline X 25007418 GCCTTGCAGGTCTGGTTCCAGAACCGTCGGGCCAAGTGGCGCAAGCGGGAGAAGGCAGGCG 59157279 427008 NM_001171.5(ABCC6):c.1540G>A (p.Val514Ile) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16190259 CATGGCTGGGAGGGAGCCTTTCTGGACAGAGTCCTGGGCATCCGAGGCCAGGAGCTGGGCG 397508532 68376 NM_000492.3(CFTR):c.3293G>A (p.Trp1098Ter) CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline 7 117611734 ACTGGTTCTTGTACCTGTCAACACTGCGCTGGTTCCAAATGAGAATAGAAATGATTTTTGT 373746463 23641 NM_000256.3(MYBPC3):c.3330+5G>A MYBPC3 Jan 05, 2017 MedGen:C1861862,OMIM:115197;MedGen:CN517202 Familial hypertrophic cardiomyopathy 4;not provided germline 11 47333189 TGCAGAAAGCCGACAAGAAGACCATGGTGAGCCCAGGGTCTGGGGTCCCCACGTGCACCCT 878853659 240463 NM_000118.3(ENG):c.68-1G>A ENG Jan 10, 2018 MedGen:C0039445,OMIM:187300,Orphanet:ORPHA774,SNOMED CT:21877004;MedGen:CN517202 Osler hemorrhagic telangiectasia syndrome;not provided germline 9 127843246 CCTGGCCTCTTTCCGGATGTTTCTCCAACAGGTCTTGCAGAAACAGTCCATTGTGACCTTC 63749856 21618 NM_001171.5(ABCC6):c.3904G>A (p.Gly1302Arg) ABCC6 May 08, 2017 MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005;MedGen:CN517202 Pseudoxanthoma elasticum;not provided germline;unknown 16 16155010 CCCGGGCAGGTGGGCATCGTTGGCAGGACCGGGGCAGGGAAGTCCTCCCTGGCCAGTGGGC 587776925 48105 NM_003094.3(SNRPE):c.133G>A (p.Gly45Ser) SNRPE Jan 10, 2013 MedGen:C3554409,OMIM:615059 Hypotrichosis 11 germline 1 203863714 CTCTATGAGCAAGTGAATATGCGGATAGAAGGCTGTATCATTGTGAGTATCCAGGCGATTT 80358313 21333 NM_002335.3(LRP5):c.1828G>A (p.Gly610Arg) LRP5 Aug 01, 2005 MedGen:C4016839 Exudative vitreoretinopathy 4, autosomal recessive germline 11 68406550 CCAGGAACCAACCCGTGTGCGGACAGGAACGGGGGGTGCAGCCACCTGTGCTTCTTCACAC 137852373 25185 NM_000132.3(F8):c.5167G>A (p.Glu1723Lys) F8 Aug 01, 1991 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154928623 AAAACACGACACTATTTTATTGCTGCAGTGGAGAGGCTCTGGGATTATGGGATGAGTAGCT 886039743 259622 NM_001854.3(COL11A1):c.1685G>A (p.Gly562Asp) COL11A1 Aug 26, 2016 MedGen:CN517202 not provided germline 1 103006314 TATGGTTTAATTATGATGTCTTGATATAGGGCCCTCGAGGCGTCCAGGGTCCCCCTGGTCC 111033735 36561 NM_000155.3(GALT):c.602G>A (p.Arg201His) GALT Dec 03, 2015 MedGen:C0268151,OMIM:230400,Orphanet:ORPHA79239,SNOMED CT:124354006 Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase germline 9 34648371 CCAGCAGTTTCCTGCCAGATATTGCCCAGCGTGAGGAGCGATCTCAGCAGGCCTATAAGAG 772551056 181624 NM_003000.2(SDHB):c.137G>A (p.Arg46Gln) SDHB Sep 11, 2017 MedGen:C1708353,Orphanet:ORPHA29072;MedGen:C0027672,SNOMED CT:699346009;MedGen:C1861848,OMIM:115310;MedGen:CN517202 Hereditary Paraganglioma-Pheochromocytoma Syndromes;Hereditary cancer-predisposing syndrome;Paragangliomas 4;not provided germline;unknown 1 17044824 CTCCCCGTATCAAGAAATTTGCCATCTATCGATGGGACCCAGACAAGGCTGGAGACAAACC -1 442154 NM_000435.2(NOTCH3):c.752G>A (p.Cys251Tyr) NOTCH3 Jan 22, 2016 MedGen:CN517202 not provided germline 19 15191795 CAGGACACCGATGTCTCAATGGGGGGACATGCGTGGATGGCGTCAACACCTATAACTGCCA 80338657 18855 NM_000081.3(LYST):c.4688G>A (p.Arg1563His) LYST Feb 16, 2012 MedGen:CN068762;MedGen:C0007965,OMIM:214500,Orphanet:ORPHA167,SNOMED CT:111396008 Chediak-Higashi syndrome, adult type;Chédiak-Higashi syndrome germline 1 235788701 CTGATCCCCACAATGCCACTCTTATCTTTCGGTATTGATTATCCTCAGCCTCCCATGAATA -1 474927 NM_002485.4(NBN):c.1502G>A (p.Trp501Ter) NBN Dec 09, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 8 89953587 AACAAACACAACCTGCTACACCCTCATTGTGGAAAAATAAGGAGCAGCATCTATCTGAGAA 6413484 23691 NM_000163.4(GHR):c.484G>A (p.Val162Ile) GHR Nov 01, 1998 MedGen:C1858656,OMIM:604271,OMIM:615925 Short stature, idiopathic, autosomal germline 5 42699868 CCCATTGCCCTCAACTGGACTTTACTGAACGTCAGTTTAACTGGGATTCATGCAGATATCC 587779708 107222 NM_000090.3(COL3A1):c.2023-1G>A (p.Gly675Valfs*116) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188999284 TAATATGGTTATTTACATATTTTTGTCACAGGGTGATGCTGGTGCCCCTGGTGAACGTGGA 121918732 27539 NM_000359.2(TGM1):c.652G>A (p.Gly218Ser) TGM1 Sep 01, 1997 MedGen:C3536797,OMIM:242300 Autosomal recessive congenital ichthyosis 1 germline 14 24260555 CGGGTCCACACTTCCCCCAACGCCATCATCGGCAAGTTTCAGTTCACAGTCCGCACACAAT 869312725 225903 NM_017671.4(FERMT1):c.957+1G>A FERMT1 Jan 07, 2016 MedGen:C0406557,OMIM:173650,SNOMED CT:238835001,SNOMED CT:238836000 Kindler's syndrome germline 20 6097523 GAAGAAATGTTGATCTTTGCAGCTCTACAGGTATGGGAACTTCAGTACCTTTTCTCTGGAA 193922219 51564 NM_000138.4(FBN1):c.5788+5G>A FBN1 Mar 20, 2017 Human Phenotype Ontology:HP:0002616,MedGen:C0238669;Human Phenotype Ontology:HP:0001166,MedGen:C0003706;Human Phenotype Ontology:HP:0002622,MedGen:C0012736;Human Phenotype Ontology:HP:0001083,MedGen:C0013581,Orphanet:ORPHA1885,SNOMED CT:74969002;Human Phenotype Ontology:HP:0002140,MedGen:C0948008,OMIM:601367,SNOMED CT:422504002;Human Phenotype Ontology:HP:0002861,MeSH:D008545,MedGen:C0025202,SNOMED CT:2092003;MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;Human Phenotype Ontology:HP:0011003,MedGen:C0271183;MedGen:CN517202 Aortic root dilatation;Arachnodactyly;Dissecting aortic aneurysm;Ectopia lentis;Ischemic stroke;Malignant melanoma;Marfan syndrome;Severe Myopia;not provided germline;unknown 15 48446701 CCTTTCTCACAACAATGACTGTATAGGTGCGTGTGCAAAATTGTGCATCAGCAAAGGAAGT 876660765 233008 NM_000038.5(APC):c.933+1G>A APC Sep 18, 2015 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 5 112815594 CGAAGGCTGACAAGTCATCTGGGAACCAAGGTAACAGAAGATTACAAACCCTGGTCACTAA 1064795534 405686 NM_004321.7(KIF1A):c.304G>A (p.Gly102Ser) KIF1A May 04, 2017 MedGen:C3280283,OMIM:614255;MedGen:CN517202 Mental retardation, autosomal dominant 9;not provided germline 2 240788110 TGCATCTTCGCCTATGGGCAGACGGGTGCCGGCAAGTCCTACACCATGATGGGCAAGCAGG 121907904 18531 NM_024426.4(WT1):c.1193G>A (p.Cys398Tyr) WT1 May 01, 1992 MedGen:C0950121,OMIM:194080,Orphanet:ORPHA220,SNOMED CT:236385009 Drash syndrome germline 11 32396313 AACGCCCCTTCATGTGTGCTTACCCAGGCTGCAATAAGAGATATTTTAAGCTGTCCCACTT 72653768 427017 NM_001171.5(ABCC6):c.1460G>A (p.Arg487Gln) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16190339 AGGAGGAGCAAATGAGGCAGAAGGACTCACGGGCACGGCTCACCAGCTCTATCCTCAGGAA 879255515 75259 NM_015375.2(DSTYK):c.24G>A (p.Trp8Ter) DSTYK Jan 25, 2018 Gene:100034704,MedGen:C1835826,OMIM:610805 Congenital anomalies of kidney and urinary tract 1, susceptibility to germline 1 205211512 AGAGGCGATGGAGGGCGACGGGGTGCCATGGGGCAGCGAGCCCGTCTCGGGTCCCGGCCCC 104894415 20583 NM_006783.4(GJB6):c.31G>A (p.Gly11Arg) GJB6 Aug 03, 2016 Human Phenotype Ontology:HP:0007529,MedGen:C0162361,OMIM:129500,Orphanet:ORPHA189,SNOMED CT:54209007;MedGen:CN043648,Orphanet:ORPHA87884;MedGen:CN517202 Hidrotic ectodermal dysplasia syndrome;Nonsyndromic hearing loss and deafness;not provided germline 13 20223450 ATGGATTGGGGGACGCTGCACACTTTCATCGGGGGTGTCAACAAACACTCCACCAGCATCG 727505397 178395 NM_003688.3(CASK):c.1976G>A (p.Gly659Asp) CASK Jan 21, 2014 MedGen:C2677903,OMIM:300749,Orphanet:ORPHA163937 Mental retardation and microcephaly with pontine and cerebellar hypoplasia de novo X 41553782 TTAGTAAGGATGATCATAATTGGTGGCAGGGTAAACTGGAAAACTCCAAAAATGGAACTGC 59565950 31207 NM_002055.4(GFAP):c.716G>A (p.Arg239His) GFAP May 16, 2017 MedGen:C0270726,OMIM:203450,Orphanet:ORPHA58,SNOMED CT:81854007;MedGen:CN517202 Alexander's disease;not provided de novo;germline 17 44913333 CAGACCTCACCGCAGCCCTGAAAGAGATCCGCACGCAGTATGAGGCAATGGCGTCCAGCAA 199795644 76425 m.14831G>A MT-CYB Sep 19, 2013 Human Phenotype Ontology:HP:0001112,MedGen:C0917796,OMIM:535000,Orphanet:ORPHA104,SNOMED CT:58610003 Leber's optic atrophy not provided MT 14831 ATCGACCTCCCCACCCCATCCAACATCTCCGCATGATGAAACTTCGGCTCACTCCTTGGCG 398123588 99543 NM_001165963.1(SCN1A):c.2576G>A (p.Arg859His) SCN1A Apr 06, 2017 MedGen:C0393706,Orphanet:ORPHA1934;MedGen:C1858673,OMIM:604403;MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002;MedGen:CN517202 Early infantile epileptic encephalopathy;Generalized epilepsy with febrile seizures plus, type 2;Severe myoclonic epilepsy in infancy;not provided germline 2 166039436 TCGCCAATGTGGAAGGATTATCTGTTCTCCGTTCATTTCGATTGGTAAAAAAAAAAAAAAA 553203474 106851 NM_000090.3(COL3A1):c.2222G>A (p.Gly741Asp) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188999570 GAGGAGGTCTTGGAAGTCCTGGTCCAAAGGGTGACAAGGTGTTGACTTGTTTTCTCTTAAT 121908660 21307 NM_002335.3(LRP5):c.29G>A (p.Trp10Ter) LRP5 Nov 16, 2001 MedGen:C0432252,OMIM:259770,Orphanet:ORPHA2788,SNOMED CT:254112001 Osteoporosis with pseudoglioma germline 11 68312743 ACATGGAGGCAGCGCCGCCCGGGCCGCCGTGGCCGCTGCTGCTGCTGCTGCTGCTGCTGCT 886041553 264159 NM_001904.3(CTNNB1):c.198G>A (p.Trp66Ter) CTNNB1 Feb 11, 2016 MedGen:CN517202 not provided germline 3 41224710 TGTGGATACCTCCCAAGTCCTGTATGAGTGGGAACAGGGATTTTCTCAGTCCTTCACTCAA 72659310 413963 NM_000089.3(COL1A2):c.2835+1G>A COL1A2 - MedGen:C0023931,OMIM:166200,SNOMED CT:385482004;MedGen:C0268363,OMIM:166220,Orphanet:ORPHA216820,SNOMED CT:205497004 Osteogenesis imperfecta type I;Osteogenesis imperfecta with normal sclerae, dominant form unknown 7 94425664 CCAGGTCGCGATGGTCAACCCGGACACAAGGTCAGTACACTTTTCATCTTTCTCTAATTCA 886040861 262090 NM_000836.2(GRIN2D):c.1999G>A (p.Val667Ile) GRIN2D Oct 19, 2016 MedGen:C4310687,OMIM:617162 Epileptic encephalopathy, early infantile, 46 germline 19 48419722 ATCATGGTGCTGGTGTGGGCCTTCTTCGCCGTCATCTTCCTCGCCAGCTACACAGCCAACC 63751027 95984 NM_000251.2(MSH2):c.1034G>A (p.Trp345Ter) MSH2 Sep 05, 2013 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Lynch syndrome germline 2 47416387 CCCCTCAAGGACAAAGACTTGTTAACCAGTGGATTAAGCAGCCTCTCATGGATAAGAACAG 119456963 17676 NM_153240.4(NPHP3):c.2918G>A (p.Arg973Gln) NPHP3 Apr 01, 2008 MedGen:C2673883,OMIM:208540,Orphanet:ORPHA294415 Renal-hepatic-pancreatic dysplasia germline 3 132688857 TAGTACCTTTGCAGAGGTCTTTAGAGATTCGAGAAACAGCTTTAGATCCCGATCACCCAAG 1131691326 422096 NM_004380.2(CREBBP):c.5600G>A (p.Arg1867Gln) CREBBP May 04, 2017 MedGen:CN517202 not provided germline 16 3729447 ACCGCCTGCAGCAGGCCCAGCTCATGCGCCGGCGGATGGCCACCATGAACACCCGCAACGT 1085307938 414926 NM_004366.5(CLCN2):c.71G>A (p.Gly24Asp) CLCN2 Dec 22, 2017 Gene:79179,MedGen:C1854107,OMIM:605635,Orphanet:ORPHA404;MedGen:CN517202 Hyperaldosteronism, familial, type II;not provided de novo;germline 3 184359124 CCCCATCCCCTCTGTTGCTCCAGATGTATGGCCGGTACACTCAGGACCTTGGGGCCTTTGC -1 441837 NM_000296.3(PKD1):c.8162-1G>A PKD1 Mar 17, 2017 MedGen:CN517202 not provided germline 16 2103896 GTCTCTGCACTGACCTCACGCATGTCTGCAGGAGACCTCATCCACCTGGCCAGCTCGGACG 121912955 32149 NM_004530.5(MMP2):c.1210G>A (p.Glu404Lys) MMP2 Mar 01, 2005 MedGen:C1850155,OMIM:259600 Multicentric osteolysis, nodulosis and arthropathy germline 16 55491830 GGGTACAGCCTGTTCCTCGTGGCAGCCCACGAGTTTGGCCACGCCATGGGGCTGGAGCACT 1057524755 375940 NM_144612.6(LOXHD1):c.4741-1G>A LOXHD1 Jan 23, 2017 MedGen:CN517202 not provided germline 18 46524602 CTGCAACTGCCAGTCCTGCTCTCCCACACAGGAGTACACTGGGGACCGCAGCAGCAACTGC 730880318 28292 NM_001079.3(ZAP70):c.1624-11G>A ZAP70 Jun 11, 2016 MedGen:C1849236,OMIM:269840 Severe combined immunodeficiency, atypical germline 2 97737984 ACACTGGTCACTCACAGGTGTCTCTGCCCCGGCTTGAGCAGAAGATGAAAGGGCCGGAGGT 72659322 444189 NM_000089.3(COL1A2):c.3079G>A (p.Gly1027Arg) COL1A2 Oct 02, 2017 MedGen:CN517202 not provided germline 7 94426504 AGAGGTCTTCCTGGCTTAAAGGGACACAATGGATTGCAAGGTCTGCCTGGTATCGCTGTAA 397509172 69862 NM_007294.3(BRCA1):c.441+1G>A BRCA1 Jun 06, 2016 MedGen:C2676676,OMIM:604370;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 1;Hereditary cancer-predisposing syndrome germline 17 43104121 CTACAGAGTGAACCCGAAAATCCTTCCTTGGTAAAACCATTTGTTTTCTTCTTCTTCTTCT 752935814 246455 NM_000527.4(LDLR):c.1998G>A (p.Trp666Ter) LDLR Mar 30, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline;inherited 19 11120380 CTCCGCTTCTTCTGCCCCAGGAGTGAACTGGTGTGAGAGGACCACCCTGAGCAATGGCGGC 727504334 174763 NM_000256.3(MYBPC3):c.2149-1G>A MYBPC3 Aug 08, 2017 Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN169374 Hypertrophic cardiomyopathy;Primary familial hypertrophic cardiomyopathy;not specified germline 11 47338680 TGGATCTCACCCCAACTCTGCACCCCCCCAGCTGCTGTGTGAGACCGAGGGCCGGGTCCGC 587783009 166158 NM_025114.3(CEP290):c.1711+1G>A CEP290 Sep 18, 2014 MedGen:C1857821,OMIM:611755 Leber congenital amaurosis 10 unknown 12 88118482 AAGAAAGAGGAAAAAGAAGTGCAACTTCAGGTATACTCAGTTATTCTAAACCTTTAAAAAG 104886323 35582 NM_000495.4(COL4A5):c.142-1G>A COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108559063 GACCTTACCTTTCATTCTCATTTAATTGCAGGGAGAGAGAGGGTTTCCAGGTTTGGAAGGA 80356723 34337 NM_007375.3(TARDBP):c.883G>A (p.Gly295Ser) TARDBP Mar 12, 2015 MedGen:C2677565,OMIM:612069 Amyotrophic lateral sclerosis type 10 germline 1 11022292 AATCAGGGTGGATTTGGTAATAGCAGAGGGGGTGGAGCTGGTTTGGGAAACAATCAAGGTA 431905508 48583 NM_001199397.1(NEK1):c.433G>A (p.Gly145Arg) NEK1 Feb 20, 2013 MedGen:C0024507,OMIM:263520,SNOMED CT:72922008 Short rib-polydactyly syndrome, Majewski type germline 4 169589478 TTTTTAACTAAAGATGGAACAGTACAACTTGGAGATTTTGGAATTGCTAGAGTTCTTAATA 538881762 216941 NM_001098816.2(TENM4):c.3412G>A (p.Val1138Met) TENM4 Oct 15, 2015 MedGen:C4225223,OMIM:616736 Tremor, hereditary essential, 5 germline 11 78726217 TTTTGCCTCATTCTGTCACCTACAGTTTCCGTGGGTTATGAATATGAATCCTGCCCAGATC 397516357 52565 NM_000363.4(TNNI3):c.557G>A (p.Arg186Gln) TNNI3 Aug 17, 2017 Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Hypertrophic cardiomyopathy;Primary familial hypertrophic cardiomyopathy;not provided germline 19 55151910 TCTGACTCATCGCCATCCTCCAGGAAAACCGGGAGGTGGGAGACTGGCGCAAGAACATCGA -1 485480 NM_032043.2(BRIP1):c.1940G>A (p.Trp647Ter) BRIP1 Feb 24, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 17 61776558 CTAATAATGACATATTCATATTCTAGGTTTGGGTTGGTACCATTGGGTCAGGCCCCAAGGG 72558482 103272 NM_000531.5(OTC):c.996G>A (p.Trp332Ter) OTC - MedGen:CN517202 not provided unknown X 38411990 AGTGTTCCCAGAGGCAGAAAACAGAAAGTGGACAATCATGGTAAGCAAGAAACAAGGAATG 199922550 75128 NM_013334.3(GMPPB):c.1069G>A (p.Val357Ile) GMPPB Oct 05, 2017 MedGen:CN229783,Orphanet:ORPHA370953;MedGen:C3714932,OMIM:615352,Orphanet:ORPHA363623;MedGen:CN517202 Muscular dystrophy-dystroglycanopathy;Muscular dystrophy-dystroglycanopathy (limb-girdle), type c, 14;not provided germline 3 49721847 ATGGAGAACGTGACAGTGCTGGGTGAGGACGTCATAGTTAATGATGAGCTCTACCTCAACG 886041024 263461 NM_080675.3(SUN5):c.781G>A (p.Val261Met) SUN5 Nov 07, 2016 MedGen:C4310674,OMIM:617187 Spermatogenic failure 16 germline 20 32985852 TGCTGGGCCTTTGAGGGTGACCGCGGCCAGGTGACCATCCAATTGGCTCAGAAGGTTTACC 132630327 437734 NM_000475.4(NR0B1):c.315G>A (p.Trp105Ter) NR0B1 Oct 05, 2017 MedGen:C0342482,OMIM:300200,SNOMED CT:237764004 Congenital adrenal hypoplasia, X-linked maternal X 30309049 GGCGCCCGAGGCGACGCTGGGTCCGTGCTGGGGCTGTTCGTGCGGCTCTGATCCCGGGGTG 121907956 18938 NM_000520.5(HEXA):c.1496G>A (p.Arg499His) HEXA Nov 02, 2017 MedGen:CN068769;MeSH:D030342,MedGen:C0950123;MedGen:C0039373,OMIM:272800,Orphanet:ORPHA845,SNOMED CT:111385000;MedGen:CN517202 Gm2-gangliosidosis, juvenile;Inborn genetic diseases;Tay-Sachs disease;not provided germline 15 72345476 TGACATCTGACCTGACATTTGCCTATGAACGTTTGTCACACTTCCGCTGTGAATTGCTGAG 104894916 25548 NM_000513.2(OPN1MW):c.989G>A (p.Arg330Gln) OPN1MW Jun 07, 2002 Human Phenotype Ontology:HP:0011521,MedGen:C0155016,OMIM:303800 Colorblindness, partial, deutan series germline X 154195934 CTCAATAACGCTTTCTGTCCTTCCAGTTTCGAAACTGCATCTTGCAGCTTTTCGGGAAGAA 137853212 32853 NM_001082971.1(DDC):c.823G>A (p.Ala275Thr) DDC Aug 03, 2015 MedGen:C1291564,OMIM:608643,Orphanet:ORPHA35708,SNOMED CT:124600004 Deficiency of aromatic-L-amino-acid decarboxylase germline 7 50499201 GACATATGGCTGCACGTTGATGCAGCCTACGCAGGCAGTGCATTCATCTGCCCTGAGTTCC 587780463 135786 NM_018344.5(SLC29A3):c.300+1G>A SLC29A3 Feb 03, 2014 MedGen:C1864445,OMIM:602782,Orphanet:ORPHA168569 Histiocytosis-lymphadenopathy plus syndrome germline 10 71323055 GGGGAGGACCCTGAGGGCTCAGACATCCTGGTAAGGGCATGTTTCTCCTGCAAGGCTGGTG 267606811 26598 NM_001159702.2(FHL1):c.838G>A (p.Val280Met) FHL1 Aug 18, 2009 MedGen:C2678055,OMIM:300696,Orphanet:ORPHA178461 Myopathy with postural muscle atrophy, X-linked germline X 136209392 CCGGGTGGAGAGAGGACTTGTCCCTCGTGGGTGGTGGTTCTTTATAGAAAAAATCGAAGCT 886039691 260151 NM_004278.3(PIGL):c.60G>A (p.Trp20Ter) PIGL Aug 05, 2016 MedGen:CN517202 not provided germline 17 16217286 GTTGGCGGTCTTGGCATGGGGCTTCCTCTGGGTTTGGGACTCCTCAGAACGAATGAAGAGT 869320702 227092 NM_058246.3(DNAJB6):c.346+5G>A DNAJB6 Mar 27, 2017 MedGen:C3148763,OMIM:603511,Orphanet:ORPHA34517 Limb-girdle muscular dystrophy, type 1E germline 7 157367488 GGACCCATTTTCATTTGACTTCTTTGGTAAGTTAATCACGTGGGTTGACTTGGTGTGTGTC 137852233 25618 NM_000133.3(F9):c.316G>A (p.Gly106Ser) F9 Jun 13, 2017 MedGen:C0008533,OMIM:306900,Orphanet:ORPHA98879,SNOMED CT:41788008;MedGen:CN169374 Hereditary factor IX deficiency disease;not specified germline X 139541114 CAGTGTGAGTCCAATCCATGTTTAAATGGCGGCAGTTGCAAGGATGACATTAATTCCTATG 104894268 31735 NM_000244.3(MEN1):c.778G>A (p.Glu260Lys) MEN1 Nov 01, 1998 MeSH:D018761,MedGen:C0025267,OMIM:131100,Orphanet:ORPHA652,SNOMED CT:30664006 Multiple endocrine neoplasia, type 1 germline 11 64807572 CCTTCCATTGACCTGCACACCGACTCGCTGGAGCTTCTGCAGCTGCAGCAGGTGAGGGCTG 121912945 32160 NM_080680.2(COL11A2):c.1981G>A (p.Gly661Arg) COL11A2 Jun 13, 1997 MedGen:C0432210,OMIM:215150,SNOMED CT:254060000 Otospondylomegaepiphyseal dysplasia germline 6 33177216 CTTCTCTTTCCCTGTATGTAGGGTCTTCCCGGGCCCCAGGGTGCCATCGGCCCTCATGGAG 1064797077 411518 NM_000054.4(AVPR2):c.878G>A (p.Trp293Ter) AVPR2 Oct 01, 2016 MedGen:C1563705,OMIM:304800 Nephrogenic diabetes insipidus, X-linked germline X 153906384 GCTGGGCACCCTTCTTCCTGGTGCAGCTGTGGGCCGCGTGGGACCCGGAGGCACCTCTGGA 796053509 203162 NM_000548.4(TSC2):c.3180G>A (p.Trp1060Ter) TSC2 Oct 01, 2016 MedGen:CN517202 not provided germline 16 2079324 CCTCCTAGCGGGTGGCAGGACCAAAACCTGGCTGGTTGGGAACAAGCTTGTCACTGTGACG 587776812 29588 NM_000228.2(LAMB3):c.628+42G>A LAMB3 Jul 01, 2008 MedGen:C0268374,OMIM:226650,Orphanet:ORPHA89840,SNOMED CT:33662006 Adult junctional epidermolysis bullosa somatic 1 209633028 TACTTCTCTTGTCCATGGAACTATGGGTGGGAAAGGAAACAGAGTTGGAGCCCAGGTCATG 886039654 260055 NM_000359.2(TGM1):c.132G>A (p.Trp44Ter) TGM1 Jun 08, 2016 MedGen:CN517202 not provided germline 14 24262221 CTCTCGCAGAGGAGGAGGCCGTTCCTTCTGGGCTCGCTGCTGTGGCTGCTGTTCATGCCGA 886043146 269823 NM_015295.2(SMCHD1):c.1843-1G>A SMCHD1 Jan 08, 2016 Gene:2490,MedGen:C1834671,OMIM:158901 Facioscapulohumeral muscular dystrophy 2 germline 18 2705693 GCTTTTTTTTTTTTTAAAAACTAAATATTAGGTCAAGACAATCAAGACACTTCCCCTCTTT 1131691863 422522 NM_000216.3(ANOS1):c.3G>A (p.Met1Ile) ANOS1 Jun 28, 2017 MedGen:CN517202 not provided germline X 8732034 CCCTCGCCCTCGCCCTCGACCCGCAGCCATGGTGCCCGGGGTGCCCGGCGCGGTCCTGACC 886039679 259837 NM_020732.3(ARID1B):c.3025+1G>A ARID1B Jun 20, 2016 MedGen:CN517202 not provided germline 6 157167186 TGGCGCCCGCCATGGTGAACAGCTCGGCAGGTAACCTTGGCAGCTCTGCGCTCCTGAGCCC 121908958 21714 NM_001130978.1(DYSF):c.3137G>A (p.Arg1046His) DYSF Sep 13, 2016 MedGen:C1850889,OMIM:253601,Orphanet:ORPHA268;MedGen:C1850808,OMIM:254130,Orphanet:ORPHA45448 Limb-girdle muscular dystrophy, type 2B;Miyoshi muscular dystrophy 1 germline 2 71570704 CACACCGACGGCGGCGCTGGGTGCGCCTGCGCAGGAGGGATCTCAGCCAAATGGAAGCACT 367932369 97531 NM_213649.1(SFXN4):c.471+1G>A SFXN4 Sep 08, 2017 MedGen:C3810001,OMIM:615578,Orphanet:ORPHA391348 Combined oxidative phosphorylation deficiency 18 germline 10 119157870 TTCAACAGCATCAATGGAAACAGAAGTTACGTGAGTATTATGAGACCCAGAGAGTGTGGGG 121909126 22679 NM_003240.4(LEFTY2):c.1025G>A (p.Ser342Asn) LEFTY2 Mar 01, 1999 MedGen:C1866091 Left-right axis malformations germline 1 225937517 AGGGAGGCAGGACCAGGCCCCAGGTGGTCAGCCTGCCCAACATGAGGGTGCAGAAGTGCAG 748170941 181727 NM_001128425.1(MUTYH):c.309G>A (p.Trp103Ter) MUTYH Jun 14, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1837991,OMIM:608456,Orphanet:ORPHA247798;MedGen:CN517202 Hereditary cancer-predisposing syndrome;MYH-associated polyposis;not provided germline;unknown 1 45333452 CACAGCCTTCCGAGGGAGCCTGCTAAGCTGGTACGACCAAGAGAAACGGGACCTACCATGG 794727182 191867 NM_000276.3(OCRL):c.1714-1G>A OCRL Apr 13, 2015 MedGen:C0028860,OMIM:309000,Orphanet:ORPHA534,SNOMED CT:79385002 Lowe syndrome germline X 129575896 TGCATGTTTGTGTCTGTCTGTTATTCCCCAGTTTGTGTTTGAAAATGTGAAGTTTCGGCAA 863225139 214234 NM_001134831.1(AHI1):c.2297G>A (p.Gly766Glu) AHI1 Feb 23, 2015 MedGen:C1837713,OMIM:608629 Joubert syndrome 3 unknown 6 135431284 GTCATCATATGTATTCAGGAGATTGTACAGGGGTGATTGTTGTTTGGAATACCTATGTCAA 80358137 70096 NM_007294.3(BRCA1):c.5153-1G>A BRCA1 Oct 17, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145;MedGen:CN517202 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome;not provided germline 17 43063374 ATGTAACCTGTCTTTTCTATGATCTCTTTAGGGGTGACCCAGTCTATTAAAGAAAGAAAAA 67330615 103201 NM_000531.5(OTC):c.757G>A (p.Ala253Thr) OTC - MedGen:CN517202 not provided unknown X 38408915 AAGCTGTTGCTGACAAATGATCCATTGGAAGCAGCGCATGGAGGCAATGTATTAATTACAG 1060501262 397276 NM_000077.4(CDKN2A):c.-19311G>A CDKN2A Sep 20, 2016 MedGen:C1512419;MedGen:CN517202 Hereditary cutaneous melanoma;not provided germline 9 21994138 TAGGGCAGCAGCCGCTTCCTAGAAGACCAGGTAGGAAAGGCCCTCGAAAAGTCCGGGGCGC 63751262 426798 NM_001171.5(ABCC6):c.4253G>A (p.Arg1418Gln) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16150728 AGCTCCTGTGTCTGGCACGTGCCCTTCTCCGGAAGACCCAGATCCTCATCCTGGACGAGGC 878853257 39230 NM_006086.3(TUBB3):c.613G>A (p.Glu205Lys) TUBB3 Feb 04, 2016 MedGen:C3279670,OMIM:614039 Cortical dysplasia, complex, with other brain malformations 1 germline 16 89935064 AACACGGATGAGACCTACTGCATCGACAACGAGGCGCTCTACGACATCTGCTTCCGCACCC 72653748 426854 NM_001171.5(ABCC6):c.3722G>A (p.Trp1241Ter) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16159495 TGTCAGTGGAGCGGATGCAGGACTATGCCTGGACGCCCAAGGAGGTGATGGGCGGGAGGTG 201728948 359566 NM_000094.3(COL7A1):c.7344G>A (p.Val2448=) COL7A1 Mar 21, 2016 MedGen:CN517202 not provided germline 3 48570639 CCTGGGGCCACCTGGACCACCGGGGTCAGTGGTGAGTAGAGGTGCCCTAAAGCCCCACGTA 796053030 201460 NM_001165963.1(SCN1A):c.4931G>A (p.Gly1644Asp) SCN1A Sep 18, 2013 MedGen:CN517202 not provided germline 2 165992344 TGTTCCGAGTGATCCGTCTTGCTAGGATTGGCCGAATCCTACGTCTGATCAAAGGAGCAAA 121912805 32580 NM_000083.2(CLCN1):c.871G>A (p.Glu291Lys) CLCN1 Dec 01, 1995 MedGen:C0751360,OMIM:255700,SNOMED CT:20305008 Congenital myotonia, autosomal recessive form germline 7 143330789 TGTGCCCCTGCAGGAGTGCTATTTAGCATCGAGGTCACCTCCACCTACTTTGCTGTTCGGA 797044781 195848 NM_000033.3(ABCD1):c.1781-1G>A ABCD1 May 14, 2014 MedGen:C0162309,OMIM:300100,Orphanet:ORPHA43,SNOMED CT:65389002 Adrenoleukodystrophy germline X 153742986 GAACTGAGCCAAGACCATTGCCCCCGCCTAGGTTGGGAGGCTATGTGTGACTGGAAGGACG 121913557 29359 NM_005912.2(MC4R):c.148G>A (p.Val50Met) MC4R Aug 01, 2001 MedGen:C0028754,OMIM:601665,Orphanet:ORPHA71529,SNOMED CT:414916001 Obesity germline 18 60372202 TGCTACGAGCAACTTTTTGTCTCTCCTGAGGTGTTTGTGACTCTGGGTGTCATCAGCTTGT 879254952 246232 NM_000527.4(LDLR):c.1599G>A (p.Trp533Ter) LDLR Mar 25, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11116106 TCTCTGTCCTCCCACCAGCTTCATGTACTGGACTGACTGGGGAACTCCCGCCAAGATCAAG 141179774 359096 NM_003805.4(CRADD):c.509G>A (p.Arg170His) CRADD Dec 19, 2016 MedGen:C3281044,OMIM:614499 Mental retardation, autosomal recessive 34 germline 12 93850180 TGGTGGAGGCCTTCATCCGTTGGCGGCAGCGCTTCGGGAAGCAGGCCACCTTCCAGAGCCT 397514047 75300 NM_181523.2(PIK3R1):c.1465G>A (p.Glu489Lys) PIK3R1 Apr 02, 2014 MedGen:C0878684,OMIM:269880 SHORT syndrome germline 5 68294575 ATGAAAAGGACAGCTATTGAAGCATTTAATGAAACCATAAAAATATTTGAAGAACAGTGCC 121912877 32409 NM_001844.4(COL2A1):c.908G>A (p.Gly303Asp) COL2A1 Oct 02, 2014 MedGen:C0265279,OMIM:156550,Orphanet:ORPHA485,SNOMED CT:53974002;MedGen:C2020284,OMIM:108300 Kniest dysplasia;Stickler syndrome type 1 germline 12 47993825 CAGGCCTGGACGGTGCTAAGGGAGAGGCGGGTGCTCCTGGTGTGAAGGTGAGAGGCCAGAA 794728266 197610 NM_000138.4(FBN1):c.7205-1G>A FBN1 Mar 11, 2016 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:CN517202 Marfan syndrome;not provided germline 15 48425865 TATTTCTTAATTTATATTTGTTAAATTACAGATATCGATGAATGCAAGGTTATTCACGATG 144732839 438532 NM_017807.3(OSGEP):c.839G>A (p.Arg280His) OSGEP Oct 26, 2017 MedGen:CN570505,OMIM:617729 GALLOWAY-MOWAT SYNDROME 3 germline 14 20447645 AGGAGATGATGGCAACAATGTGCCAGGAACGTGGAGCCCGGCTTTTTGCTACAGATGAGAG 121913040 224773 NM_001257988.1(TYMP):c.931G>A (p.Gly311Ser) TYMP Jan 14, 2016 MedGen:C0872218,OMIM:603041,Orphanet:ORPHA298 Mitochondrial DNA depletion syndrome 1 (MNGIE type) germline 22 50526474 CGCGCCTAAGACCCGTCCCCGCCCGCAGGGGGCGCCCTGCTCTGGCTCAGCGGACACGCGG -1 488069 NM_000169.2(GLA):c.439G>A (p.Gly147Arg) GLA May 23, 2016 Human Phenotype Ontology:HP:0001071,MedGen:C0002986,OMIM:301500,Orphanet:ORPHA324,SNOMED CT:16652001 Fabry disease germline X 101401740 GTTGGAAATAAAACCTGCGCAGGCTTCCCTGGGAGTTTTGGATACTACGACATTGATGCCC 786205163 187944 NM_173354.4(SIK1):c.1906G>A (p.Gly636Ser) SIK1 Apr 30, 2015 MedGen:C4225360,OMIM:616341 Epileptic encephalopathy, early infantile, 30 germline 21 43417613 AGCCCCTTCCACGCCCCTGCACAGAGCCCAGGCCTGCACGGCGGCGCAGCCGGCAGCCGGG -1 432173 NM_000444.5(PHEX):c.1753G>A (p.Gly585Arg) PHEX Oct 28, 2013 MedGen:C0733682,OMIM:307800,Orphanet:ORPHA89936,SNOMED CT:82236004 Familial X-linked hypophosphatemic vitamin D refractory rickets germline X 22219088 GGAGTAATTGTCGGACATGAATTTACACATGGATTTGATAATAATGGTAAGTACCGGTTCA 869312967 226913 NM_005094.3(SLC27A4):c.1774G>A (p.Gly592Arg) SLC27A4 Feb 24, 2013 MeSH:D030342,MedGen:C0950123 Inborn genetic diseases germline 9 128355796 CTGCGCCTCCTGCCTGAGCTGCACAAAACAGGTGTGTCCCTCCCCTGCTCCAGCTCTCGGA 863225159 214209 NM_023073.3(CPLANE1):c.7778G>A (p.Trp2593Ter) CPLANE1 Feb 23, 2015 MedGen:C3553264,OMIM:614615 Joubert syndrome 17 unknown 5 37158258 AGCTTTCCAGTGAAATGTCAGAGAAACCTTGGTCACCCTCAATACCTCATACAGTAACAAA 777966677 188299 NM_032492.3(JAGN1):c.59G>A (p.Arg20Gln) JAGN1 Jan 01, 2013 Human Phenotype Ontology:HP:0005541,MedGen:C1853118,Orphanet:ORPHA42738 Severe congenital neutropenia germline 3 9890781 CCGGCACCGACGGCAGCGACTTTCAGCACCGGGAGCGCGTCGCCATGCACTACCAGATGAG 28931600 32026 NM_000165.4(GJA1):c.427G>A (p.Gly143Ser) GJA1 Jan 01, 2004 MedGen:C1861366,OMIM:186100,Orphanet:ORPHA93404 Syndactyly type 3 germline 6 121447274 AAGAAGTTCAAGTACGGTATTGAAGAGCATGGTAAGGTGAAAATGCGAGGGGGGTTGCTGC 397517164 49119 NM_005633.3(SOS1):c.322G>A (p.Glu108Lys) SOS1 Aug 10, 2017 MeSH:D009634,MedGen:C0028326,Orphanet:ORPHA648,SNOMED CT:205824006;MedGen:CN166718,Orphanet:ORPHA98733;MedGen:CN517202 Noonan syndrome;Rasopathy;not provided germline 2 39058696 AAGCGAAGAAACCCTTTATCTCTCCCAGTAGAAAAAATTCATCCTTTATTAAAGGTAATGC 121918379 28223 NM_002906.3(RDX):c.1732G>A (p.Asp578Asn) RDX May 01, 2007 MedGen:C1970239,OMIM:611022 Deafness, autosomal recessive 24 germline 11 110231889 ATTCGACAAGGCAATACAAAGCAGCGTATCGATGAGTTTGAAGCAATGTGAGAGCTGTTAT 121913033 31800 NM_000111.2(SLC26A3):c.1386G>A (p.Trp462Ter) SLC26A3 Dec 01, 2002 MedGen:C0267662,OMIM:214700,Orphanet:ORPHA53689,SNOMED CT:24412005 Congenital secretory diarrhea, chloride type germline 7 107779689 GATGCAGTTTGCTGAAATAGGCAGATTGTGGCGAAAGGACAAATATGATTGTGTAAGTAGA 587776864 38708 NM_000184.2(HBG2):c.202G>A (p.Val68Met) HBG2 May 12, 2011 MedGen:C3151421,OMIM:613977,Orphanet:ORPHA280615 Cyanosis, transient neonatal germline 11 5254405 AACCCCAAAGTCAAGGCACATGGCAAGAAGGTGCTGACTTCCTTGGGAGATGCCATAAAGC 121918207 16099 NM_018122.4(DARS2):c.788G>A (p.Arg263Gln) DARS2 Feb 17, 2016 MedGen:C1970180,OMIM:611105,Orphanet:ORPHA137898;MedGen:CN230084 Leukoencephalopathy with Brainstem and Spinal Cord Involvement and Lactate Elevation;Leukoencephalopathy with brain stem and spinal cord involvement and lactate elevation germline 1 173838207 TTCTCAATTGTAGATATTTTCAGGTTGCCCGATGTTATCGAGATGAAGGTTCAAGACCAGA 121912697 33161 NM_000341.3(SLC3A1):c.1085G>A (p.Arg362His) SLC3A1 Apr 01, 2003 Human Phenotype Ontology:HP:0003131,MedGen:C0010691,OMIM:220100,Orphanet:ORPHA214,SNOMED CT:85020001 Cystinuria germline 2 44301076 CCACGCAGGTGGGAATGCACGACATTGTCCGCAGCTTCCGGCAGACCATGGACCAATACAG 41293461 70099 NM_007294.3(BRCA1):c.5153G>A (p.Trp1718Ter) BRCA1 Jun 29, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 1;Hereditary cancer-predisposing syndrome germline 17 43063373 TGTAACCTGTCTTTTCTATGATCTCTTTAGGGGTGACCCAGTCTATTAAAGAAAGAAAAAT 72658151 193887 NM_000089.3(COL1A2):c.1971+1G>A COL1A2 Dec 23, 2014 MedGen:C0268362,OMIM:259420,Orphanet:ORPHA216812,SNOMED CT:385483009;MedGen:C0268363,OMIM:166220,Orphanet:ORPHA216820,SNOMED CT:205497004 Osteogenesis imperfecta type III;Osteogenesis imperfecta with normal sclerae, dominant form germline 7 94417832 GCTGGCATACCTGGAGGCAAGGGAGAAAAGGTACGTGTTGACCCCTATTACATATTGTTGA 1064793801 411162 NM_000425.4(L1CAM):c.1939+1G>A L1CAM Jun 25, 2015 MedGen:CN517202 not provided germline X 153867799 CTGCAGAAGACCACAATGCCCCCATTGAGAGTAAGAGGCTTGAGCTCAGTGCCACCCCACC 111033620 25059 NM_000206.2(IL2RG):c.341G>A (p.Gly114Asp) IL2RG Aug 01, 1993 MedGen:C1279481,OMIM:300400,SNOMED CT:203592006 X-linked severe combined immunodeficiency germline X 71110617 ACTATCTATTCTCTGAAGAAATCACTTCTGGCTGTCAGTTGCAAAAAAAGGAGATCCACCT 886043630 271652 NM_000426.3(LAMA2):c.7439+1G>A LAMA2 May 09, 2016 MedGen:C1263858,OMIM:607855,Orphanet:ORPHA258,SNOMED CT:111503008 Merosin deficient congenital muscular dystrophy germline 6 129473353 TGGTGGCCTGCCAACGCTGAGAAACTTGAGGTAATTTAGTTTATATGTAAAGCTAAGGATT 121918552 31956 NM_018947.5(CYCS):c.124G>A (p.Gly42Ser) CYCS Feb 01, 2014 MedGen:C2677608,OMIM:612004 Thrombocytopenia 4 germline 7 25123996 AATCTCCATGGTCTCTTTGGGCGGAAGACAGGTCAGGCCCCTGGATACTCTTACACAGCCG 193922680 33370 NM_005159.4(ACTC1):c.301G>A (p.Glu101Lys) ACTC1 May 07, 2017 MedGen:C2677506,OMIM:612098;MedGen:C3150682;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Familial hypertrophic cardiomyopathy 11;Left ventricular noncompaction 4;Primary familial hypertrophic cardiomyopathy;not provided germline 15 34793398 ACCTTCTACAATGAGCTCCGTGTGGCTCCCGAGGAGCACCCCACCCTGCTCACAGAGGCCC 397514335 36411 NM_000060.4(BTD):c.1271G>A (p.Cys424Tyr) BTD Dec 07, 2015 MedGen:C0220754,OMIM:253260,Orphanet:ORPHA79241,SNOMED CT:8808004;MedGen:CN517202 Biotinidase deficiency;not provided germline 3 15645127 ATCTCCACGTCTGTTCCAATGGCCTCTGCTGTTATTTACTTTACGAGAGGCCCACCTTATC 878855095 241206 NM_024649.4(BBS1):c.416G>A (p.Trp139Ter) BBS1 Mar 13, 2016 MedGen:C0752166,OMIM:209900,Orphanet:ORPHA110,SNOMED CT:5619004 Bardet-Biedl syndrome germline;unknown 11 66514662 TGCCTCCAAATCCTCTGGAACAAGACCTTTGGAACCAGGCCAAAGAGGTAAATAAATAACA 28937888 19641 NM_020427.2(SLURP1):c.256G>A (p.Gly86Arg) SLURP1 Jan 01, 2003 MedGen:C0025221,OMIM:248300,Orphanet:ORPHA87503,SNOMED CT:239069005 Acroerythrokeratoderma germline 8 142741199 TCCTGTGTGGCCACCGACCCCGACAGCATCGGGGCCGCCCACCTGATCTTCTGCTGCTTCC 147622433 231465 NM_018136.4(ASPM):c.4422G>A (p.Trp1474Ter) ASPM Dec 15, 2015 MedGen:CN517202 not provided germline 1 197104829 AGAAAATTCTGCTATTATCATACAATCATGGTATAGAATGCATAAAGAATTACGGAAATAT 121917807 33183 NM_000021.3(PSEN1):c.796G>A (p.Gly266Ser) PSEN1 Apr 08, 2002 MedGen:C1843015 Alzheimer disease, familial, 3, with spastic paraparesis and apraxia germline 14 73198057 CTAGATTTAGTGGCTGTTTTGTGTCCGAAAGGTCCACTTCGTATGCTGGTTGAAACAGCTC 61754278 16826 NM_000102.3(CYP17A1):c.1040G>A (p.Arg347His) CYP17A1 Jun 10, 2015 MedGen:C0268285,OMIM:202110,SNOMED CT:124220008;MedGen:C3277849 Deficiency of steroid 17-alpha-monooxygenase;Isolated 17,20-lyase deficiency germline 10 102832610 GTTTCAGCCGCACACCAACTATCAGTGACCGTAACCGTCTCCTCCTGCTGGAGGCCACCAT 869312344 224000 NM_000169.2(GLA):c.605G>A (p.Cys202Tyr) GLA Jun 15, 2016 Human Phenotype Ontology:HP:0001071,MedGen:C0002986,OMIM:301500,Orphanet:ORPHA324,SNOMED CT:16652001 Fabry disease germline X 101400700 ATAGGACTGGCAGAAGCATTGTGTACTCCTGTGAGTGGCCTCTTTATATGTGGCCCTTTCA 1057518152 360380 NM_001271043.2(NFIX):c.583+1G>A NFIX Oct 14, 2016 MedGen:CN517202 not provided germline 19 13025553 TTTATCTGGCTTACTTTGTCCACACTCCGGGTAGGTCGTTCTCAACCATTTTTCCCTCTCA 28934578 27413 NM_000546.5(TP53):c.524G>A (p.Arg175His) TP53 Aug 24, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0085390,Orphanet:ORPHA524,SNOMED CT:428850001;Gene:553989,MedGen:C1835398,OMIM:151623;MedGen:C0546837,OMIM:133239,SNOMED CT:363402007;MeSH:D009369,MedGen:C0027651,SNOMED CT:108369006;Human Phenotype Ontology:HP:0100013,MeSH:D001943,MedGen:C1458155,Orphanet:ORPHA180250,SNOMED CT:126926005;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Li-Fraumeni syndrome;Li-Fraumeni syndrome 1;Malignant tumor of esophagus;Neoplasm;Neoplasm of the breast;not provided germline;somatic;unknown 17 7675088 AGTCACAGCACATGACGGAGGTTGTGAGGCGCTGCCCCCACCATGAGCGCTGCTCAGATAG -1 418824 NM_025114.3(CEP290):c.1623+5G>A CEP290 May 09, 2017 MeSH:D057130,MedGen:C0339527,Orphanet:ORPHA65,SNOMED CT:193413001 Leber congenital amaurosis germline 12 88118638 CTGAAAACCAGATTCTTTTGAAAGAGGCAAGTGTGGTAGTCAGTTGATTATTTTCTTGGCT 121909054 22129 NM_005025.4(SERPINI1):c.1174G>A (p.Gly392Arg) SERPINI1 Jun 29, 2016 MedGen:C1858680,OMIM:604218,Orphanet:ORPHA85110 Encephalopathy, familial, with neuroserpin inclusion bodies de novo;germline 3 167825264 TGAACCAATACAGGTACAATTCTATTCATGGGACGAGTCATGCATCCTGAAACAATGAACA 363808 264850 NM_000138.4(FBN1):c.5917+1G>A FBN1 Jan 25, 2016 MedGen:CN517202 not provided germline 15 48445375 AGGTGGCTCCAGATGGGAGGACCTGTGTGGGTAAGTACAGGACTTAGAAAGACCTGGAAAG 1085307853 415477 NM_000548.4(TSC2):c.4006-1G>A TSC2 Mar 28, 2017 MedGen:CN517202 not provided germline 16 2084227 CAGGGGTTCTCTTTGGGATGGTCCTTTCTAGTCGTCCTCAGTCTCCAGCCAGGAGGAGAAG 180177163 200602 NM_000030.2(AGXT):c.1102G>A (p.Ala368Thr) AGXT Nov 27, 2014 MedGen:C0268164,OMIM:259900,Orphanet:ORPHA93598,SNOMED CT:65520001 Primary hyperoxaluria, type I germline 2 240878744 GTGCTGCGGATCGGCCTGCTGGGCTGCAATGCCACCCGCGAGAATGTGGACCGCGTGACGG 370215797 485830 NM_000044.4(AR):c.475G>A (p.Ala159Thr) AR May 09, 2005 MedGen:C0039585,OMIM:300068,SNOMED CT:12313004 Androgen resistance syndrome germline X 67545621 CTGCCAGCACCTCCGGACGAGGATGACTCAGCTGCCCCATCCACGTTGTCCCTGCTGGGCC 886040884 262124 NM_015247.2(CYLD):c.2108G>A (p.Arg703Lys) CYLD Sep 23, 2016 MedGen:C1857941,OMIM:605041,Orphanet:ORPHA79493 Spiegler-Brooke syndrome germline 16 50787852 TTTTAAGGGTAGAACCTTTGCTAAAAATAAGGTAACCTTTAAATTGTTCTAGAAGCATTGG -1 429128 NM_007055.3(POLR3A):c.3243-1G>A POLR3A Jul 26, 2016 MedGen:C1843200,OMIM:607694 Hypomyelinating leukodystrophy 7 germline 10 77984299 CTAGTGCCATTTTTCCTTTGCTTCTCAACAGCACTCCAATTATCACAGCACAGCTAGACAA 55989760 22774 NM_000104.3(CYP1B1):c.1159G>A (p.Glu387Lys) CYP1B1 Apr 01, 2017 Human Phenotype Ontology:HP:0000557,MedGen:C0020302,OMIM:231300,Orphanet:ORPHA98976 Buphthalmos germline 2 38071195 AACCTGCCCTATGTCCTGGCCTTCCTTTATGAAGCCATGCGCTTCTCCAGCTTTGTGCCTG 773814837 438524 NM_033550.3(TP53RK):c.125G>A (p.Gly42Asp) TP53RK Oct 27, 2017 MedGen:CN570506,OMIM:617730 GALLOWAY-MOWAT SYNDROME 4 germline 20 46689290 TCTTGAGCGGCCTGGAGCTGGTGAAGCAGGGTGCCGAGGCGCGCGTGTTCCGTGGCCGCTT 55778939 427073 NM_001171.5(ABCC6):c.346-6G>A ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16219688 CCTCCCCTAAGGGGCCTCCCTGACTTTCCCGTCCAGAGCTTCGCAGTGTTCCTGATTCACA 886041912 264179 NM_025132.3(WDR19):c.2363+1G>A WDR19 May 30, 2017 MedGen:CN517202 not provided germline 4 39234876 AAAAGAATATGCTATTCAGCTTGAATTCGCGTAAGTCTTTGTTTTTATACATTTCAGTCAG 749804502 214849 NM_016218.3(POLK):c.461G>A (p.Gly154Glu) POLK Feb 05, 2013 Human Phenotype Ontology:HP:0012125,MedGen:C0376358,OMIM:176807,SNOMED CT:399068003 Malignant tumor of prostate somatic 5 75573790 GGAGATTTGGTGTTCGTGCAGCCATGCCAGGATTTATTGCTAAGAGGCTGTGCCCACAACT 199847983 39576 NM_000153.3(GALC):c.857G>A (p.Gly286Asp) GALC Apr 26, 2017 MedGen:C0023521,OMIM:245200,Orphanet:ORPHA487,SNOMED CT:192782005;MedGen:CN517202 Galactosylceramide beta-galactosidase deficiency;not provided germline;unknown 14 87968386 TTAGCACTTTAAATAGTGACATGGGTGCAGGCTGCTGGGGTCGCATTTTAAATCAGAATTA 587779472 106911 NM_000090.3(COL3A1):c.3473G>A (p.Gly1158Asp) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189008090 CTGGCAAAGATGGAACCAGTGGACATCCAGGTCCCATTGGACCACCAGGGCCTCGAGGTAA 1057519306 361824 NM_001128608.1(MAPKBP1):c.2444-1G>A MAPKBP1 May 22, 2017 MedGen:CN781300,OMIM:617271 Nephronophthisis 20 germline 15 41819594 ACACTTCCTCTGACTGCCTGTTTCTGTCTAGCCTCGGTCCCCAGCCCAGCTTTGCCCCGAA 1064792873 224779 NM_001257989.1(TYMP):c.1175G>A (p.Gly392Asp) TYMP Jan 14, 2016 MedGen:C0872218,OMIM:603041,Orphanet:ORPHA298 Mitochondrial DNA depletion syndrome 1 (MNGIE type) germline 22 50526141 GCCCGCGCCTCTCAGCCCCTCTCCCCGCAGGCACCGTGGAGCTGGTCCGGGCGCTGCCGCT 786205870 190060 NM_004369.3(COL6A3):c.7660G>A (p.Ala2554Thr) COL6A3 Jun 04, 2015 MedGen:C4225336,OMIM:616411,Orphanet:ORPHA464440 Dystonia 27 germline 2 237344358 ACAAGGCAGGAAGACCGGCAGCTCATCAACGCTTTGCAGGTCTGTGCTCTGTGCGTGCTGT 794726824 187854 NM_001165963.1(SCN1A):c.965-1G>A SCN1A Jul 11, 2017 MedGen:C0393706,Orphanet:ORPHA1934;MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002;MedGen:CN517202 Early infantile epileptic encephalopathy;Severe myoclonic epilepsy in infancy;not provided germline;inherited 2 166048950 GTTCATCATACGACTTTCTTTTTTCAAACAGGATATCATTATTTCCTGGAGGGTTTTTTAG 587779648 107131 NM_000090.3(COL3A1):c.3419G>A (p.Gly1140Glu) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189008036 GGCATTGTGATGTCATGATACTTTCTTAGGGACCTGTTGGACCCAGTGGACCTCCTGGCAA 879253777 244149 NM_001127660.1(MFN2):c.730G>A (p.Val244Met) MFN2 Aug 18, 2015 MedGen:C1836485,OMIM:609260,Orphanet:ORPHA99947 Charcot-Marie-Tooth disease, type 2A2A de novo 1 11999009 TTTATCTAGGAAAAGCACTTCTTCCACAAGGTGAGTGAGCGTCTCTCCCGGCCAAACATCT 121434578 31255 NM_000663.4(ABAT):c.659G>A (p.Arg220Lys) ABAT Jan 01, 2014 MedGen:C0342708,OMIM:613163,Orphanet:ORPHA2066,SNOMED CT:237941007 Gamma-aminobutyric acid transaminase deficiency germline 16 8768248 TCCTCTCCTTCATGGGCGCGTTCCATGGGAGGACCATGGGTAAGGAGGGACCATTGCGCTC 104886163 35835 NM_000495.4(COL4A5):c.2165G>A (p.Gly722Glu) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108602982 ATCATTTTACAGGCTTTCCTGGAATTCCAGGACCTCCAGGAGCACCTGGGACACCTGGAAG 118204112 16510 NM_000190.3(HMBS):c.748G>A (p.Glu250Lys) HMBS Jan 01, 1994 MedGen:C0162565,OMIM:176000,Orphanet:ORPHA79276,SNOMED CT:234422006 Acute intermittent porphyria germline 11 119092500 GATCCCGAGACTCTGCTTCGCTGCATCGCTGAAAGGGCCTTCCTGAGGCACCTGGTAGGGC 727505361 178316 NM_024537.3(CARS2):c.655G>A (p.Ala219Thr) CARS2 Oct 21, 2015 MedGen:C4225251,OMIM:616672,Orphanet:ORPHA477774;MedGen:CN517202 Combined oxidative phosphorylation deficiency 27;not provided germline 13 110683051 GGCGTGGTCCCTGGTCCAGTCGGAGAGCCAGGTGGGTTGGCCGGGCTCAGCCCTGTGGGTC 121908009 18862 NM_000456.2(SUOX):c.1589G>A (p.Gly530Asp) SUOX Dec 26, 1997 MedGen:CN068763 Sulfite oxidase deficiency, isolated germline 12 56004978 ACACCGTGGCCCCAATCTGGAACCTGCGAGGTGTTCTCAGCAATGCCTGGCATCGTGTCCA 111996685 200530 NM_000030.2(AGXT):c.680+1G>A AGXT Nov 27, 2014 MedGen:C0268164,OMIM:259900,Orphanet:ORPHA93598,SNOMED CT:65520001 Primary hyperoxaluria, type I germline 2 240874063 CTCGCTCATCTCCTTCAGTGACAAGGCCAAGTGAGTGACCCACAGACCCTCACCTCTGTGC 193919336 19032 NM_001243766.1(POMGNT1):c.932G>A (p.Arg311Gln) POMGNT1 Oct 01, 2006 na;MedGen:C0457133,OMIM:253280,Orphanet:ORPHA588,SNOMED CT:277950001 Congenital muscular dystrophy-dystroglycanopathy with brain and eye anomalies, type A3;Muscle eye brain disease germline 1 46193873 ATGTGCCTGTGGCTGTCATTGCAGGGAACCGACCCAATTACCTGTACAGGTAAGCCTGGGA 796052088 200658 NM_138413.3(HOGA1):c.227G>A (p.Gly76Asp) HOGA1 Nov 27, 2014 MedGen:C3150878,OMIM:613616,Orphanet:ORPHA93600 Primary hyperoxaluria, type III germline 10 97598790 CTGTGTCTCTTGCAGGCTTCGTGGTCCAGGGCTCCAATGGCGAGTTTCCTTTCCTGACCAG 397515786 51497 NM_000138.4(FBN1):c.3164G>A (p.Cys1055Tyr) FBN1 Aug 11, 2017 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:CN118826,Orphanet:ORPHA91387 Marfan syndrome;Marfan syndrome;Thoracic aortic aneurysm and aortic dissection germline 15 48488412 GAAACACCATTGGCAGCTTTAAGTGCAGGTGTGACAGCGGCTTTGCTCTTGATTCTGAAGA 767178508 358131 NM_004004.5(GJB2):c.439G>A (p.Glu147Lys) GJB2 Apr 13, 2017 MedGen:C2675750,OMIM:601544;MedGen:C2673759,OMIM:220290;MedGen:CN517202;MedGen:CN169374 Deafness, autosomal dominant 3a;Deafness, autosomal recessive 1A;not provided;not specified germline;unknown 13 20189143 ACAAGCAGCATCTTCTTCCGGGTCATCTTCGAAGCCGCCTTCATGTACGTCTTCTATGTCA 61753185 18815 NM_000372.4(TYR):c.230G>A (p.Arg77Gln) TYR Mar 16, 2015 MedGen:C0268494,OMIM:203100,Orphanet:ORPHA79431,SNOMED CT:6483008;MedGen:CN517202 Tyrosinase-negative oculocutaneous albinism;not provided germline 11 89178183 CTCAATTTCCCTTCACAGGGGTGGATGACCGGGAGTCGTGGCCTTCCGTCTTTTATAATAG 767006508 359114 NM_013247.4(HTRA2):c.1211G>A (p.Arg404Gln) HTRA2 Dec 17, 2016 MedGen:C4310650,OMIM:617248 3-methylglutaconic aciduria, type VIII germline 2 74532714 ATAAAGTCATCCTGGGCTCCCCTGCACACCGGTGAGGGAGAGGCTGCAGTGTGATATGGGG 781050795 38788 NM_001111035.2(ACP5):c.325G>A (p.Gly109Arg) ACP5 Feb 01, 2011 MedGen:C1842763,OMIM:607944 Spondyloenchondrodysplasia with immune dysregulation germline 19 11576780 CTTCGCAAAGTGCCCTGGTACGTGCTAGCCGGAAACCATGACCACCTTGGCAATGTCTCTG 121918729 27536 NM_000359.2(TGM1):c.281G>A (p.Gly94Asp) TGM1 Apr 01, 2001 MedGen:C3536797,OMIM:242300 Autosomal recessive congenital ichthyosis 1 germline 14 24262072 GCTCAGACTCCCGCCGGCCTGTATCCCGGGGCAGCGGTGTCAATGCAGCTGGAGATGGCAC -1 447750 NM_020451.2(SELENON):c.665G>A (p.Trp222Ter) SELENON Feb 24, 2017 MedGen:C0410180,OMIM:602771,SNOMED CT:240063002 Eichsfeld type congenital muscular dystrophy germline 1 25808707 CGCCAGGCCAGGAGCTGGGTGAGCCCTGGTGGATCATCCCCAGTGAGCTGAGCATGTTCAC 121434351 17054 NM_001134831.1(AHI1):c.2168G>A (p.Arg723Gln) AHI1 Dec 05, 2016 Human Phenotype Ontology:HP:0002335,MedGen:C0431399,Orphanet:ORPHA475,SNOMED CT:253175003,SNOMED CT:716997004;MedGen:C1837713,OMIM:608629 Joubert syndrome;Joubert syndrome 3 germline;unknown 6 135433125 TAGTTACAGGATGCTATGATTCCATGATACGGATATGGAAAGTTGAGATGAGAGAAGATTC 121908794 57843 NM_000492.3(CFTR):c.1680-1G>A CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline 7 117590352 AAATGTAATTTAATTTCCATTTTCTTTTTAGAGCAGTATACAAAGATGCTGATTTGTATTT 797044960 204589 NM_005982.3(SIX1):c.373G>A (p.Glu125Lys) SIX1 Sep 01, 2011 MedGen:C1854594,OMIM:605192 Deafness, autosomal dominant 23 germline 14 60648817 TTTCCACTGCCGCGCACCATCTGGGACGGCGAGGAGACCAGCTACTGCTTCAAGGAGAAGT 28936675 23916 NM_000193.3(SHH):c.91G>A (p.Gly31Arg) SHH Aug 29, 2013 MedGen:C1840529,OMIM:142945 Holoprosencephaly 3 germline 7 155812032 GGACTGGCGTGCGGACCGGGCAGGGGGTTCGGGAAGAGGAGGCACCCCAAAAAGCTGACCC 267608179 186750 NM_000466.2(PEX1):c.2926+1G>A PEX1 Mar 25, 2016 MedGen:C0043459,OMIM:214100,Orphanet:ORPHA912,SNOMED CT:88469006 Zellweger syndrome germline;unknown 7 92494486 CTCAGTTGGATGGAGTAGAAGGCTTACAGGGTAATAATTATAAATACAGAAATAGAATGTT 387906808 39150 NM_013416.3(NCF4):c.314G>A (p.Arg105Gln) NCF4 Feb 11, 2016 MedGen:C0018203,Orphanet:ORPHA379;MedGen:C3151409,OMIM:613960 Chronic granulomatous disease;Granulomatous disease, chronic, autosomal recessive, cytochrome b-positive, type III germline 22 36867434 TGGGTGTGAAACAGGAGATCGCCGAGATGCGGATACCTGCCCTCAACGCCTACATGAAGGT 76713772 22151 NM_000492.3(CFTR):c.1585-1G>A CFTR May 11, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008;MedGen:CN517202;MedGen:CN169374 Cystic fibrosis;not provided;not specified germline;unknown 7 117587738 TGACTCTCTAATTTTCTATTTTTGGTAATAGGACATCTCCAAGTTTGCAGAGAAAGACAAT 119489101 20462 NM_016938.4(EFEMP2):c.169G>A (p.Glu57Lys) EFEMP2 May 12, 2011 MedGen:C3280798,OMIM:614437;MedGen:CN033664,OMIM:219100 Autosomal recessive cutis laxa type 1B;Autosomal recessive cutis laxa type IA germline 11 65871355 CCCAGCAGGCCCCTCTCTGCAGATGTCAACGAGTGTCTGACCATCCCTGAGGCCTGCAAGG 267606773 15224 NM_001385.2(DPYS):c.1303G>A (p.Gly435Arg) DPYS Sep 01, 1998 MedGen:C0342803,OMIM:222748,SNOMED CT:238014002 Dihydropyrimidinase deficiency germline 8 104392924 TTCAACATTTTCGAGGGCATGGTTTGCCACGGGGTGCCCCTTGTGACTATTTCAAGAGGCA 397515794 51510 NM_000138.4(FBN1):c.368G>A (p.Cys123Tyr) FBN1 Jun 03, 2011 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006 Marfan syndrome germline 15 48600213 TTTTTCAAGTACAACACTGCAATATTCGCTGTATGAATGGAGGTAGCTGCAGTGACGATCA 80359148 131733 NM_000059.3(BRCA2):c.8969G>A (p.Trp2990Ter) BRCA2 May 12, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 2;Hereditary cancer-predisposing syndrome;not provided germline 13 32379765 TCTTTCTCCAAACAGTTATACTGAGTATTTGGCGTCCATCATCAGATTTATATTCTCTGTT 77939446 28972 NM_020975.4(RET):c.1826G>A (p.Cys609Tyr) RET Jul 26, 2017 MedGen:C1833921,OMIM:155240,Orphanet:ORPHA99361;MedGen:C1833921,OMIM:155240,Orphanet:ORPHA99361;MedGen:C0027672,SNOMED CT:699346009;na;MedGen:C4016286;Human Phenotype Ontology:HP:0002865,MeSH:C536914,MedGen:C0238462,Orphanet:ORPHA1332,SNOMED CT:255032005;MeSH:D018761,MedGen:C0025267,OMIM:131100,Orphanet:ORPHA652,SNOMED CT:30664006;MedGen:CN073359,Orphanet:ORPHA653,SNOMED CT:61808009;MeSH:D018813,MedGen:C0025268,OMIM:171400,Orphanet:ORPHA247698,SNOMED CT:61808009;MeSH:D018813,MedGen:C0025268,OMIM:171400,Orphanet:ORPHA247698,SNOMED CT:61808009;MeSH:D018814,MedGen:C0025269,OMIM:162300,Orphanet:ORPHA247709,SNOMED CT:6153000,SNOMED CT:61530001;MedGen:C1970712,OMIM:610755,Orphanet:ORPHA276152;MedGen:CN517202;MedGen:CN169374 Familial medullary thyroid carcinoma;Familial medullary thyroid carcinoma;Hereditary cancer-predisposing syndrome;MEN2A and FMTC;MULTIPLE ENDOCRINE NEOPLASIA, TYPE IIA, WITH HIRSCHSPRUNG DISEASE;Medullary thyroid carcinoma;Multiple endocrine neoplasia, type 1;Multiple endocrine neoplasia, type 2;Multiple endocrine neoplasia, type 2a;Multiple endocrine neoplasia, type 2a;Multiple endocrine neoplasia, type 2b;Multiple endocrine neoplasia, type 4;not provided;not specified germline;somatic;unknown 10 43113622 CCCGGGGGATTAAAGCTGGCTATGGCACCTGCAACTGCTTCCCTGAGGAGGAGAAGTGCTT 786204481 186643 NM_000642.2(AGL):c.2309-1G>A AGL Aug 13, 2017 MedGen:C1968739;MedGen:C0017922,OMIM:232400,Orphanet:ORPHA308684,SNOMED CT:66937008 Glycogen storage disease IIIa;Glycogen storage disease type III germline;unknown 1 99884119 ATTTTGTTAAAATGTTTTTATGTATTCCTAGGCAAAATTGAAGAAGTAGTTCTTGAAGCTA 387906517 27665 NM_007313.2(ABL1):c.763G>A (p.Glu255Lys) ABL1 Dec 26, 2014 Human Phenotype Ontology:HP:0005506,MeSH:D015464,MedGen:C0023473,OMIM:608232,Orphanet:ORPHA521;MedGen:C4016396 Chronic myeloid leukemia;Leukemia, Philadelphia chromosome-positive, resistant to imatinib germline;somatic 9 130862919 TATGGTGTGTCCCCCAACTACGACAAGTGGGAGATGGAACGCACGGACATCACCATGAAGC 761242509 260230 NM_000022.3(ADA):c.478+1G>A ADA Mar 28, 2017 MedGen:C1863236,OMIM:102700,Orphanet:ORPHA277;MedGen:CN517202 Severe combined immunodeficiency due to ADA deficiency;not provided germline 20 44625568 CCATCCTGTGCTGCATGCGCCACCAGCCCAGTGAGTAGGATCACCGCCCTGCCCAGGGCCG 886042604 267583 NM_004006.2(DMD):c.93+1G>A DMD Jul 31, 2017 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Becker muscular dystrophy;Duchenne muscular dystrophy germline X 33020138 ACAAAATGGGTAAATGCACAATTTTCTAAGGTAAGAATGGTTTGTTACTTTACTTTTAAGA 397509373 32252 NM_000090.3(COL3A1):c.2931+1G>A (p.Gly942_Lys977del) COL3A1 Dec 01, 1991 MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189004365 AGGGGAAGCCCTGGCCCTCAGGGTGTCAAGGTGAGTATAGTCATTTTCCACTACACTCTTC 1060502636 404248 NM_004006.2(DMD):c.2202G>A (p.Trp734Ter) DMD Aug 24, 2016 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Duchenne muscular dystrophy germline X 32518098 GGATGTTGATATAACTGAACTTCACAGCTGGATTACTCGCTCAGAAGCTGTGTTGCAGAGT 387906548 31481 NM_000138.4(FBN1):c.4087+1G>A FBN1 Apr 01, 1995 MedGen:C4016054 Marfan syndrome, neonatal germline 15 48474527 GGTGGATTGGAGATGGCATTAAGTGCACTGGTGAGTAGGAAAGTAACAGAGGTTGCTTATC 104894308 21952 NM_003002.3(SDHD):c.129G>A (p.Trp43Ter) SDHD Aug 15, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1868633,OMIM:168000 Hereditary cancer-predisposing syndrome;Paragangliomas 1 germline 11 112087933 ATTTCTTCAGGACCGACCTATCCCAGAATGGTGTGGAGTGCAGCACATACACTTGTCACCG 727502931 19957 NM_022124.5(CDH23):c.7362+5G>A CDH23 Sep 25, 2013 MedGen:C1832845,OMIM:601067 Usher syndrome, type 1D germline 10 71799634 GCAAGTTTGCCATCAACCCCACCACGGTGAGCAGTGATGGAGGGCCTGGAATTTGGAAGTG 267606742 32321 NM_000089.3(COL1A2):c.3269G>A (p.Gly1090Asp) COL1A2 Mar 01, 2009 MedGen:C0268362,OMIM:259420,Orphanet:ORPHA216812,SNOMED CT:385483009 Osteogenesis imperfecta type III germline 7 94427628 CCTCTCCTATCTCACTTTCACCTTTGCAGGGCCCCCCTGGTCCCCCTGGCCCTCCTGGACC 672601314 171726 NM_000492.3(CFTR):c.3963+1G>A CFTR Oct 01, 2013 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis unknown 7 117652932 GATCAAGAAATATGGAAAGTTGCAGATGAGGTAAGGCTGCTAACTGAAATGATTTTGAAAG 61752419 105107 NM_000350.2(ABCA4):c.3303G>A (p.Trp1101Ter) ABCA4 Jan 01, 2015 Human Phenotype Ontology:HP:0000556,MedGen:C0854723,Orphanet:ORPHA71862,SNOMED CT:314407005;MedGen:CN517202 Retinal dystrophy;not provided unknown 1 94042786 GGTGGACCCTTACTCGAGACGCTCAATCTGGGATCTGCTCCTGAAGTATCGCTCAGGTAAC 886043989 272962 NM_004006.2(DMD):c.9563+1G>A DMD Jan 24, 2017 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Duchenne muscular dystrophy germline X 31209497 TCTGAACTGGCTGCTGAATGTTTATGATACGTACGTATGGCATGTTTTTATTTCCCGGGCT 398122944 76977 NM_020989.3(CRYGC):c.471G>A (p.Trp157Ter) CRYGC Jan 01, 2012 MedGen:C1852438,OMIM:604307 Cataract, coppock-like germline 2 208128257 GCCCCAAGAGTACAGGCGGTGCCAGGACTGGGGGGCCATGGATGCTAAGGCAGGCTCTTTG 281874755 35623 NM_000495.4(COL4A5):c.538G>A (p.Gly180Arg) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108573646 AAGGGTAATCCAGGATATCCAGGTCCTCCTGGAATACAAGTAAGTATCCAGTGATTTTCTT 267607213 18780 NM_000527.4(LDLR):c.131G>A (p.Trp44Ter) LDLR Apr 12, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline;inherited 19 11100286 GCCAAGACGGGAAATGCATCTCCTACAAGTGGGTCTGCGATGGCAGCGCTGAGTGCCAGGA 387906828 39189 NM_004153.3(ORC1):c.2159G>A (p.Arg720Gln) ORC1 Feb 27, 2011 MedGen:CN030358,OMIM:224690 Meier-Gorlin syndrome 1 germline 1 52375574 TGTAGGTAGCAGCACTGTCTGGAGATGCACGACGGTGCCTGGACATCTGCAGGCGTGCCAC 138682654 211035 NM_006005.3(WFS1):c.631G>A (p.Asp211Asn) WFS1 Jun 05, 2014 MedGen:CN517202 not provided germline 4 6291367 CTGGAGAATGTCGGCCAGGTCAACGAGCACGGTGCGAGGATTCACCCTGGGCACCAGCCTT 753909969 275318 NM_000128.3(F11):c.1288G>A (p.Ala430Thr) F11 Sep 01, 2016 MedGen:C0015523,OMIM:612416,Orphanet:ORPHA329,SNOMED CT:49762007 Hereditary factor XI deficiency disease germline 4 186284244 ATCATTGGAAACCAGTGGATATTAACAGCCGCTCACTGTTTCTATGGGTCAGTACCACGGC 764826805 215108 NM_000035.3(ALDOB):c.324+1G>A ALDOB Aug 01, 2016 Human Phenotype Ontology:HP:0005973,MedGen:C0016751,OMIM:229600,Orphanet:ORPHA469,SNOMED CT:20052008 Hereditary fructosuria germline;unknown 9 101429754 AAGGAAAAGGGGATCGTGGTGGGAATCAAGGTGAACACCTCCATTCACACCTCACTTCTGC 63751001 426862 NM_001171.5(ABCC6):c.3662G>A (p.Arg1221His) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16159555 AGGTGACCCAGACACTGCAGTGGGTTGTTCGCAACTGGACAGACCTAGAGAACAGCATCGT 28999971 27585 NM_001252634.1(THRB):c.1040G>A (p.Gly347Glu) THRB May 07, 2015 MedGen:C2937288,OMIM:188570 Thyroid hormone resistance, generalized, autosomal dominant germline 3 24127603 CACGGGGCCAGCTGAAAAATGGGGGTCTTGGGGTGGTGTCAGACGCCATCTTTGACCTGGG 1064795334 406855 NM_001069.2(TUBB2A):c.292G>A (p.Gly98Arg) TUBB2A Jun 29, 2017 MedGen:CN517202 not provided germline 6 3154909 ACTTTCCCTCTGGCAGGCCAGAGTGGAGCCGGGAATAACTGGGCCAAGGGCCACTACACAG 113485686 32239 NM_000090.3(COL3A1):c.2356G>A (p.Gly786Arg) COL3A1 Nov 01, 1991 MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189001554 CTCTTTTTCCAGGGTGAAGGTGGTGCCCCCGGACTTCCAGGTATAGCTGGACCTCGTGGTA 5030802 52767 NM_000551.3(VHL):c.208G>A (p.Glu70Lys) VHL Oct 09, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0019562,OMIM:193300,Orphanet:ORPHA892,SNOMED CT:46659004 Hereditary cancer-predisposing syndrome;Von Hippel-Lindau syndrome germline 3 10142055 CGGCCCGTGCTGCGCTCGGTGAACTCGCGCGAGCCCTCCCAGGTCATCTTCTGCAATCGCA 863223435 210446 NM_000071.2(CBS):c.253G>A (p.Gly85Arg) CBS Dec 07, 2016 MedGen:CN517202 not provided germline 21 43068572 AAAATCTTGCCAGATATTCTGAAGAAAATCGGGGACACCCCTATGGTCAGAATCAACAAGA 879255622 247491 NM_007118.3(TRIO):c.4128G>A (p.Trp1376Ter) TRIO Mar 27, 2017 MedGen:C4310740,OMIM:617061,Orphanet:ORPHA476126 Mental retardation, autosomal dominant 44 germline 5 14390300 AGAGGATGTTGGACATTGTTTTGTTACTTGGGTAATGAAACCTCAACCATTTGTTCTCTCC 431905510 51365 NM_005984.4(SLC25A1):c.845G>A (p.Arg282His) SLC25A1 Apr 29, 2013 MedGen:C2746066,OMIM:615182,Orphanet:ORPHA19 Combined d-2- and l-2-hydroxyglutaric aciduria germline 22 19176221 CACCCAGATTCTACAAGGGCACTGTCCCCCGCCTGGGCCGGGTCTGCCTGGATGTGGCCAT 764754259 420581 NM_000321.2(RB1):c.2489+1G>A RB1 Oct 10, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline 13 48465369 AACACCAACAAAAATGACTCCAAGATCAAGGTGTGTGTTTTCTCTTTAGGGAAGTAGTAAA 104893727 20971 NM_006580.3(CLDN16):c.698G>A (p.Gly233Asp) CLDN16 Jul 02, 1999 MedGen:C0268448,OMIM:248250,Orphanet:ORPHA31043,SNOMED CT:80710001 Primary hypomagnesemia germline 3 190408419 ATATATTTCTTGGTATCCAATATAAATTTGGTTGGTCCTGTTGGCTCGGAATGGCTGGGTC 587776814 29592 NM_000228.2(LAMB3):c.629-1G>A LAMB3 Jul 01, 2008 MedGen:C0268374,OMIM:226650,Orphanet:ORPHA89840,SNOMED CT:33662006 Adult junctional epidermolysis bullosa somatic 1 209632777 CTCTTCCCTCCTTGCTGTTTGGCCCTCTCAGAGGTGGGGGAGATCACAAACTTGAGAGTCA 72554338 26040 NM_000531.5(OTC):c.259G>A (p.Glu87Lys) OTC Jul 01, 1992 MedGen:C0268542,OMIM:311250,Orphanet:ORPHA664,SNOMED CT:80908008;MedGen:CN517202 Ornithine carbamoyltransferase deficiency;not provided germline;unknown X 38369838 TTGCAAGGGAAGTCCTTAGGCATGATTTTTGAGAAAAGAAGTACTCGAACAAGATTGTCTA 1057516658 357528 NM_000441.1(SLC26A4):c.249G>A (p.Trp83Ter) SLC26A4 Mar 15, 2016 MedGen:C0271829,OMIM:274600,Orphanet:ORPHA705,SNOMED CT:70348004 Pendred's syndrome unknown 7 107663380 GTGGCTCCCCAAATACCGAGTCAAGGAATGGCTGCTTAGTGACGTCATTTCGGGAGTTAGT 35887507 30115 NM_000519.3(HBD):c.113G>A (p.Trp38Ter) HBD Jan 01, 1994 MedGen:CN070217 Delta-0-thalassemia germline 11 5234193 CTACCCTCAGATTACTGGTGGTCTACCCTTGGACCCAGAGGTTCTTTGAGTCCTTTGGGGA 104886101 35727 NM_000495.4(COL4A5):c.1226G>A (p.Gly409Asp) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108591118 CTGGATTTCCTGGAGAAAGGGGTCAGAAAGGTGATGAAGGACCACCTGGAATTTCCATTCC -1 445983 NM_005359.5(SMAD4):c.1140-1G>A SMAD4 Aug 09, 2017 MedGen:CN517202 not provided germline 18 51067018 GATAAAATGTAATTTCTTTTTTCTTCCTAAGGTTGCACATAGGCAAAGGTGTGCAGTTGGA 387906429 25136 NM_000132.3(F8):c.601+1632G>A F8 May 01, 1988 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154991304 AACCTGAATTAAAACATAACTGGAGACTTCGAAGTGAGTACTATGTTGCAAAGAGAGCTCC 398124044 100660 NM_004006.2(DMD):c.7309+1G>A DMD Dec 06, 2012 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009;MedGen:C3668940,OMIM:302045;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Becker muscular dystrophy;Dilated cardiomyopathy 3B;Duchenne muscular dystrophy germline X 31819974 TAGCTCCTGGACTGACCACTATTGGAGCCTGTAAGTATACTGGATCCCATTCTCTTTGGCT 587776787 28128 NM_000321.2(RB1):c.2211G>A (p.Glu737=) RB1 Oct 01, 1997 Human Phenotype Ontology:HP:0009919,MeSH:D012175,MedGen:C0035335,OMIM:180200,Orphanet:ORPHA790 Retinoblastoma germline 13 48463835 ATACAAGGATCTTCCTCATGCTGTTCAGGAGGTAGGTAATTTTCCATAGTAAGTTTTTTTG 121434589 29176 NM_017534.5(MYH2):c.2116G>A (p.Glu706Lys) MYH2 Sep 01, 2005 MedGen:C1854106,OMIM:605637 Inclusion body myopathy 3 germline 17 10535137 CTCCACCAGCTGAGGTGTAACGGTGTGCTGGAAGGCATCCGCATCTGTAGGAAAGGATTTC 770528538 359139 NM_014026.5(DCPS):c.636+1G>A DCPS Jul 10, 2015 MedGen:C4085595,OMIM:616459 AL-RAQAD SYNDROME germline 11 126338400 ATCCCTGACCTCAAGTGGAACCAACAGCAGGTAAAGGTTTCTGGCTGGAATGTCCTGATCT 1131690860 420535 NM_000321.2(RB1):c.940-1G>A RB1 Apr 16, 2013 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 13 48367493 GGATAATTGTCAGTGACTTTTTTCTTTCAAGGTTGAAAATCTTTCTAAACGATACGAAGAA 312262899 49414 NM_000095.2(COMP):c.1747G>A (p.Glu583Lys) COMP Feb 28, 2013 MedGen:C0410538,OMIM:177170,Orphanet:ORPHA750,SNOMED CT:22567005 Pseudoachondroplastic spondyloepiphyseal dysplasia syndrome not provided 19 18785063 GGTTACACTGCCTTCAATGGCGTGGACTTCGAGGGCACGTTCCATGTGAACACGGTCACGG 132630290 26126 NM_001128834.2(PLP1):c.3G>A (p.Met1Ile) PLP1 Mar 01, 1996 MedGen:C4016484 Pelizaeus-Merzbacher disease, mild germline X 103776998 CTACAATTGGAGTCAGAGTCCCAAAGACATGGGTAAGTTTCAAAAACTTTAGCATTGAAGA 1057520667 373295 NM_003482.3(KMT2D):c.16522-1G>A KMT2D May 01, 2015 MedGen:CN517202 not provided germline 12 49021873 TAGCATTGATTCTGCCCTCTTCTCTTTTCAGCTAACCTATGACTATCAGTTTGATTTTGAG -1 486866 NM_001005741.2(GBA):c.1312G>A (p.Asp438Asn) GBA Aug 29, 2016 MedGen:C0017205,Orphanet:ORPHA355 Gaucher disease germline 1 155235757 GGAGGACCCAATTGGGTGCGTAACTTTGTCGACAGTCCCATCATTGTAGACATCACCAAGG 80356686 33897 NM_000083.2(CLCN1):c.577G>A (p.Glu193Lys) CLCN1 Apr 12, 2011 MedGen:C0027127,Orphanet:ORPHA206973 Myotonia congenita not provided 7 143321729 CTTTCAACGCTTTTAGGCTCTGGAATCCCCGAAATGAAGACAATACTTCGTGGGGTTGTCC 863224984 213877 NM_004006.2(DMD):c.1683G>A (p.Trp561Ter) DMD Jul 21, 2014 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Duchenne muscular dystrophy germline X 32573766 GGTTCTTTTACAAGACATCCTTCTCAAATGGCAACGTCTTACTGAAGAACAGGTGTGTCAT 137852667 24153 NM_002180.2(IGHMBP2):c.1738G>A (p.Val580Ile) IGHMBP2 Jun 23, 2017 MedGen:C0007959,Orphanet:ORPHA166,SNOMED CT:50548001;MedGen:C4015349,OMIM:616155,Orphanet:ORPHA443073;MedGen:C1858517,OMIM:604320,Orphanet:ORPHA98920;MedGen:C0043116,OMIM:253300,Orphanet:ORPHA83330,SNOMED CT:64383006 Charcot-Marie-Tooth disease;Charcot-Marie-Tooth disease, axonal, type 2S;Spinal muscular atrophy, distal, autosomal recessive, 1;Werdnig-Hoffmann disease germline 11 68935404 CGAGAGAAGGAGGCCGTGATACTGTCCTTCGTCAGATCCAACAGGAAAGGTACGGAGCCCT 886039348 259688 NM_022336.3(EDAR):c.1121G>A (p.Trp374Ter) EDAR Mar 25, 2015 MedGen:CN517202 not provided germline 2 108897133 ACAACTCTGAGAAGGCTGTTGTGAAAACGTGGCGCCACCTCGCCGAGAGCTTCGGCCTGAA -1 481499 NM_130466.3(UBE3B):c.2568+1G>A UBE3B Nov 08, 2017 MedGen:C1855663,OMIM:244450,Orphanet:ORPHA2707 Kaufman oculocerebrofacial syndrome paternal 12 109524504 CTGTCTTACGACGAGGACGTCATGGGTCAGGTAGGTCCGCCCTTTGGCTGAGCTCCCTTTC 121964985 27018 NM_000481.3(AMT):c.959G>A (p.Arg320His) AMT Mar 09, 2017 Human Phenotype Ontology:HP:0008288,MedGen:C0751748,OMIM:605899,Orphanet:ORPHA407,SNOMED CT:237939006 Non-ketotic hyperglycinemia germline 3 49417892 CCCAGCTGAAGGGCAGGGTGCAGCGGAGGCGTGTGGGGTTGATGTGTGAGGGGGCCCCCAT 794728237 197674 NM_000138.4(FBN1):c.5699G>A (p.Cys1900Tyr) FBN1 Aug 11, 2017 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:CN118826,Orphanet:ORPHA91387;MedGen:CN517202 Marfan syndrome;Thoracic aortic aneurysm and aortic dissection;not provided germline 15 48446795 TAGACATAAATGAATGTGAAAGAGATGCCTGTGGGAATGGAACTTGCCGGAACACAATTGG 886044771 265324 NM_000117.2(EMD):c.3G>A (p.Met1Ile) EMD Jun 26, 2015 MedGen:C0751337,OMIM:310300;MedGen:CN517202 Emery-Dreifuss muscular dystrophy 1, X-linked;not provided germline X 154379487 CAGGCCTCCGCCTGAGCCCGCACCCGCCATGGACAACTACGCAGATCTTTCGGATACCGAG 55851803 69067 NM_007294.3(BRCA1):c.191G>A (p.Cys64Tyr) BRCA1 Nov 09, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline;unknown 17 43106477 AGAAGAAAGGGCCTTCACAGTGTCCTTTATGTAAGAATGATATAACCAAAAGGTATATAAT 794728252 197640 NM_000138.4(FBN1):c.6496G>A (p.Asp2166Asn) FBN1 Oct 25, 2012 MedGen:CN517202 not provided germline 15 48436961 GGTTATATTCTAGCAGGGAATGAATGTGTAGGTGAGTAATAAGTTTTCTTCCATAGGAACT 754449549 201822 NM_001182.4(ALDH7A1):c.1004G>A (p.Arg335Gln) ALDH7A1 Apr 30, 2013 MedGen:CN517202 not provided germline 5 126559244 CAGCTGGCCAGAGGTGTACCACTGCGAGGCGACTGGTGAGTATATCTGCATAGGCCCGATT 104886370 35911 NM_000495.4(COL4A5):c.2840G>A (p.Gly947Asp) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108622748 CAGGAGAAAAAGGTAGTAAAGGAGAGCCTGGCCTTCCAGGCCCTCCTGGACCAATGGATCC 377767387 47345 NM_005359.5(SMAD4):c.1447+1G>A SMAD4 Dec 04, 2012 MedGen:C1832942,OMIM:175050 Juvenile polyposis/hereditary hemorrhagic telangiectasia syndrome not provided 18 51076777 GATCAGTAGGTGGAATAGCTCCAGCTATCAGTAAGTATGCTTTTCATTCTTTTTTAAAGGT 1799963 28349 NM_000506.4(F2):c.*97G>A F2 Jul 14, 2017 na;MedGen:C3280672,OMIM:614390;MedGen:C0020640,OMIM:613679,Orphanet:ORPHA325,SNOMED CT:73975000;MedGen:C0398623,OMIM:188050,SNOMED CT:234467004 Ischemic stroke, susceptibility to;Pregnancy loss, recurrent, susceptibility to, 2;Prothrombin deficiency, congenital;Thrombophilia germline;unknown 11 46739505 CTATGGTTCCCAATAAAAGTGACTCTCAGCGAGCCTCAATGCTCCCAGTGCTATTCATGGG 63751119 96418 NM_000251.2(MSH2):c.2251G>A (p.Gly751Arg) MSH2 Jul 06, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Hereditary cancer-predisposing syndrome;Lynch syndrome germline 2 47478312 AAAGATTCATTAATAATCATAGATGAATTGGGAAGAGGAACTTCTACCTACGATGGATTTG 137852847 17706 NM_182760.3(SUMF1):c.1046G>A (p.Arg349Gln) SUMF1 May 16, 2003 MedGen:C0268263,OMIM:272200,Orphanet:ORPHA585,SNOMED CT:54898003 Multiple sulfatase deficiency germline 3 4362223 CTTATTGTTACAGGTATCGCTGTGCTGCTCGGAGCCAGAACACACCTGATAGCTCTGCTTC 886043700 272208 NM_001848.2(COL6A1):c.1002+1G>A COL6A1 May 09, 2016 MedGen:CN029274,OMIM:158810;MedGen:CN033863,OMIM:254090 Bethlem myopathy 1;Ullrich congenital muscular dystrophy 1 germline 21 45990423 CGTGGCATCGACGGGGTGGACGGCGTGAAGGTGACTGGGGGGAGATAGGATGGACGGGGAG 72466485 23445 NM_004082.4(DCTN1):c.211G>A (p.Gly71Arg) DCTN1 Sep 30, 2010 MedGen:C1868594,OMIM:168605,Orphanet:ORPHA178509 Perry syndrome germline 2 74378068 ATTCTGGATGAAGCAAAGGGCAAAAATGATGGAACTGTTCAAGGCAGGAAGTACTTCACTT 122468178 26443 NM_015884.3(MBTPS2):c.1286G>A (p.Arg429His) MBTPS2 Jan 24, 2017 Gene:266959,MedGen:C1839988,OMIM:308205,Orphanet:ORPHA2273;MedGen:CN517202 IFAP syndrome with or without BRESHECK syndrome;not provided germline X 21880921 TTTCAGTGAGCATCACCAGTTTTATCCCACGTTTTAACTTTCTAAGCATAGATCTGCCAGT 749544042 28717 NM_000478.5(ALPL):c.648+1G>A ALPL Oct 15, 2001 MedGen:C2673477,Orphanet:ORPHA247623 Hypophosphatasia, perinatal lethal germline 1 21564217 CAGCTCATGCATAACATCAGGGACATTGACGTGAGTGCTCGGGGGCAGCCGGGCAGGGACG -1 434111 NM_205850.2(SLC24A5):c.521G>A (p.Arg174Lys) SLC24A5 Sep 27, 2017 MedGen:CN514775 Albinism, oculocutaneous, type VI germline 15 48134915 TCTCAACACTATCATGTTGGCCCCTATTCAGAGACTGTGCAGCGTACACAATTAGTGCAGC -1 481863 NM_000494.3(COL17A1):c.1424G>A (p.Trp475Ter) COL17A1 Oct 06, 2017 MedGen:CN517202 not provided germline 10 104057016 GGAAGTGGCTGCTGGGCCTGCTGCTCACCTGGCTGCTACTCCTGGGGCTGCTCTTCGGCCT 886037850 247547 NM_003041.3(SLC5A2):c.265G>A (p.Ala89Thr) SLC5A2 Aug 02, 2016 Gene:2759,MedGen:C0017980,OMIM:233100,Orphanet:ORPHA69076,SNOMED CT:226309007 Familial renal glucosuria germline 16 31484885 GGCCACTTTGTGGGCCTGGCAGGGACTGGCGCTGCAAGTGGCTTGGCTGTTGCTGGATTCG 137852415 25260 NM_000132.3(F8):c.1630G>A (p.Asp544Asn) F8 Jan 01, 1995 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154957079 GTGACTGTAGAAGATGGGCCAACTAAATCAGATCCTCGGTGCCTGACCCGCTATTACTCTA 886044258 274005 NM_001130987.1(DYSF):c.1576+1G>A DYSF Aug 23, 2016 MedGen:C1850889,OMIM:253601,Orphanet:ORPHA268 Limb-girdle muscular dystrophy, type 2B germline 2 71539240 AAATCTCTGCCCCTGGAGGAGAAATAGAAGGTATGTTCCCTCTTCGTTCTGCCCTTTGACC 111033312 52685 NM_000441.1(SLC26A4):c.1614+1G>A SLC26A4 Jul 01, 2017 Human Phenotype Ontology:HP:0011387,MedGen:C1863752,OMIM:600791;Human Phenotype Ontology:HP:0011387,MedGen:C1863752,OMIM:600791;MedGen:C0271829,OMIM:274600,Orphanet:ORPHA705,SNOMED CT:70348004;MedGen:CN517202 Enlarged vestibular aqueduct;Enlarged vestibular aqueduct;Pendred's syndrome;not provided germline 7 107698112 ATCTACAAAAGTACCAAGAATTACAAAAACGTAAGTACCTTTGTGAGACATTTGCTGGACT 267608670 40100 NM_007055.3(POLR3A):c.2015G>A (p.Gly672Glu) POLR3A Aug 02, 2012 MedGen:C1843200,OMIM:607694 Hypomyelinating leukodystrophy 7 germline 10 78007761 ATATTTTTTACATTTTGCTGCGAGACTGGGGACAGAATGAAGCTGCAGATGCCATGTCACG 606231324 136674 NM_000257.3(MYH7):c.1573G>A (p.Glu525Lys) MYH7 Nov 08, 2017 Human Phenotype Ontology:HP:0001638,MedGen:C0878544,Orphanet:ORPHA167848,SNOMED CT:85898001;MedGen:C1834481,OMIM:613426;MedGen:C0264789,SNOMED CT:35728003;Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569;Human Phenotype Ontology:HP:0011664,MedGen:C4021133 Cardiomyopathy;Dilated cardiomyopathy 1S;Familial cardiomyopathy;Hypertrophic cardiomyopathy;Left ventricular noncompaction cardiomyopathy de novo;germline 14 23428505 ATGGACCTGCAGGCCTGCATTGACCTCATCGAGAAGGTGCCTCTTTGGCCTTACCACCTGA 121434378 17330 NM_015046.5(SETX):c.6407G>A (p.Arg2136His) SETX Jun 01, 2004 MedGen:C1865409,OMIM:602433,Orphanet:ORPHA357043 Amyotrophic lateral sclerosis type 4 germline 9 132283403 TTTAACCTTTGTTCTCTTAGGTTCAAGGACGCCCACAGAAAACACAGAGTATCATCATCTT 761612652 404682 NM_016532.3(INPP5K):c.805G>A (p.Asp269Asn) INPP5K Apr 04, 2017 MedGen:CN241833,OMIM:617404 Muscular dystrophy, congenital, with cataracts and intellectual disability germline 17 1498094 AGTGAGAAAAAACGCAAGCCTGCATGGACCGATCGCATCCTGTGGAGGCTGAAGCGGCAGC 199422268 22366 NR_001566.1(TERC):n.98G>A TERC May 10, 2012 MedGen:C1800706,OMIM:178500,Orphanet:ORPHA79126,SNOMED CT:28168000;MedGen:C3553622,OMIM:614743 Idiopathic fibrosing alveolitis, chronic form;Pulmonary fibrosis and/or bone marrow failure, telomere-related, 2 germline 3 169764963 TAGGCGCCGTGCTTTTGCTCCCCGCGCGCTGTTTTTCTCGCTGACTTTCAGCGGGCGGAAA 132630311 26073 NM_001399.4(EDA):c.187G>A (p.Glu63Lys) EDA Feb 01, 1998 MedGen:C0162359,OMIM:305100,SNOMED CT:239007005 Hypohidrotic X-linked ectodermal dysplasia germline X 69616495 CTCCACCTGCTGACGTTGTGCTGCTACCTAGAGTTGCGCTCGGAGTTGCGGCGGGAACGTG 367902696 36343 NM_000060.4(BTD):c.443G>A (p.Arg148His) BTD Apr 25, 2017 MedGen:C0220754,OMIM:253260,Orphanet:ORPHA79241,SNOMED CT:8808004;MedGen:CN517202 Biotinidase deficiency;not provided germline 3 15642041 TCAGGTGGAACCCATGCCTGGAGCCTCACCGCTTCAATGACACAGAGGTGATTCCTGCCTT 752130338 362099 NM_020247.4(COQ8A):c.1844G>A (p.Gly615Asp) COQ8A Jun 07, 2016 MedGen:C2677589,OMIM:612016,Orphanet:ORPHA139485 Coenzyme Q10 deficiency, primary, 4 germline 1 226986637 AAACCTACTCCCTGCACAGGAAGATGGGGGGCTCCTTCCTCATCTGCTCCAAGCTGAAGGC 104894568 27045 NM_000151.3(G6PC):c.370G>A (p.Ala124Thr) G6PC May 01, 1996 MedGen:C2919796,OMIM:232200 Glycogen storage disease type 1A germline 17 42907552 GGGAGCCCCTCTGGCCATGCCATGGGCACAGCAGGTGTATACTACGTGATGGTCACATCTA 1057517788 446611 NM_000444.5(PHEX):c.436+1G>A PHEX Aug 04, 2017 MedGen:CN517202 not provided germline X 22076475 AAATCCTTTATTCATCCTGCATGAATGAGAGTGAGTGATGAAGAAAACTAAATAAAATATT 121909673 31247 NM_000816.3(GABRG2):c.245G>A (p.Arg82Gln) GABRG2 Apr 14, 2015 MedGen:C1843244,OMIM:607681;MedGen:C1969810,OMIM:611277;MedGen:CN517202 Epilepsy, childhood absence 2;Familial febrile seizures 8;not provided germline 5 162093965 ACCTGCTGGAAGGATATGACAATAAACTTCGGCCTGATATAGGAGGTTTGTTAAAGTCTTT 371374918 395662 NM_001010892.2(RSPH4A):c.1068G>A (p.Trp356Ter) RSPH4A May 07, 2016 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244 Ciliary dyskinesia germline 6 116627775 TACCCACCCAATCCAAAGATGCCGCTTCTGGGGAAAGATCTTGGGTCTGGAAATGAATTAT 1002088882 427075 NM_001171.5(ABCC6):c.333G>A (p.Trp111Ter) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16219834 CCCAGAATTCCTCATTCATCCTACTGTGTGGCTCACCACGATGGTAATGATGCCTTCAGTC 121909255 23095 NM_005055.4(RAPSN):c.484G>A (p.Glu162Lys) RAPSN Jul 01, 2007 MedGen:C4225367,OMIM:616326 Myasthenic syndrome, congenital, 11, associated with acetylcholine receptor deficiency germline 11 47447859 TATGCCCACAACAATGATGACGCCATGCTCGAGTGCCGCGTGTGCTGCAGCCTGGGCAGCT 730882162 181307 NM_001195129.1(PRSS56):c.1555G>A (p.Gly519Arg) PRSS56 Feb 01, 2013 MedGen:C3150757,OMIM:613517 Microphthalmia, isolated 6 germline 2 232525249 CTGGCAGATCTGGGCTCCAAGACACTGACCGGGCTTTTCAGAGCCTGGGTGCGGGCAGGCT 386134165 51331 NM_002739.4(PRKCG):c.368G>A (p.Gly123Glu) PRKCG Apr 18, 2013 MedGen:C1854369,OMIM:605361,Orphanet:ORPHA98763 Spinocerebellar ataxia 14 not provided 19 53889720 TCTGCGACCACTGTGGCTCCCTCCTCTACGGGCTTGTGCACCAGGGCATGAAATGCTCCTG 104894043 23922 NM_000193.3(SHH):c.676G>A (p.Ala226Thr) SHH Aug 29, 2013 MedGen:C1840529,OMIM:142945 Holoprosencephaly 3 germline 7 155803613 AAGGACCTGAGCCCCGGGGACCGCGTGCTGGCGGCGGACGACCAGGGCCGGCTGCTCTACA 794727355 192824 NM_001127221.1(CACNA1A):c.3825+1G>A CACNA1A Apr 24, 2015 MedGen:C1720416,OMIM:108500,Orphanet:ORPHA97,SNOMED CT:420932006 Episodic ataxia type 2 germline 19 13283266 CCTGTGCAGCCCAACGCACCTCGGAACAACGTGAGTCCCACAGAGCACACCCCTTCCTAGC 33945777 30477 NM_000518.4(HBB):c.315+1G>A HBB Jun 30, 2017 MedGen:C0005283,OMIM:613985,Orphanet:ORPHA848,SNOMED CT:65959000;MedGen:C0271980,SNOMED CT:86715000;MedGen:CN517202;MedGen:CN169374 beta Thalassemia;beta^0^ Thalassemia;not provided;not specified germline;unknown 11 5226576 AAGCTGCACGTGGATCCTGAGAACTTCAGGGTGAGTCTATGGGACGCTTGATGTTTTCTTT 199474751 79249 NM_001042492.2(NF1):c.6001G>A (p.Gly2001Arg) NF1 Nov 04, 2014 MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003;MedGen:CN517202 Neurofibromatosis, type 1;not provided germline 17 31335026 TCTATTCAAGCAAAAATATGGGGAAGCCTTGGGCAGGTATTGAGTTTGCTCAAATATTTAT 121912916 32254 NM_000090.3(COL3A1):c.3041G>A (p.Gly1014Glu) COL3A1 Jan 01, 1992 MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189006207 TTTTATTTCCTTTCTCATTTTTTAATCAGGGAAACCCTGGATCAGATGGTCTTCCAGGCCG 199476366 79039 NM_000487.5(ARSA):c.737G>A (p.Arg246His) ARSA Jul 03, 2013 MedGen:C0023522,OMIM:250100,Orphanet:ORPHA512,SNOMED CT:396338004;MedGen:CN517202 Metachromatic leukodystrophy;not provided germline 22 50626708 GTGGGCAGAGCTTTGCAGAGCGTTCAGGCCGCGGGCCATTTGGGGACTCCCTGATGGAGCT 398122945 76980 NM_023110.2(FGFR1):c.2174G>A (p.Cys725Tyr) FGFR1 Jan 06, 2016 MedGen:C1845146,OMIM:615465,Orphanet:ORPHA2117 Hartsfield syndrome germline 8 38414164 AGGGTCACCGCATGGACAAGCCCAGTAACTGCACCAACGAGCTGTAAGCCCGAGGAGATGT 1131692150 418959 NM_181507.1(HPS5):c.219G>A (p.Arg73=) HPS5 Mar 14, 2017 MedGen:C3888004,OMIM:614074 Hermansky-Pudlak syndrome 5 inherited 11 18311914 CTGGAAGCACAGGCTTTTTCTTTCACACAGGGTAAGATTAAGGGCAGCTCTGTCATACACC 74315341 22999 NM_000261.1(MYOC):c.754G>A (p.Gly252Arg) MYOC Jan 01, 2007 MedGen:C1842028,OMIM:137750 Primary open angle glaucoma juvenile onset 1 germline 1 171636686 TTACCAGGATGTGGAGAACTAGTTTGGGTAGGAGAGCCTCTCACGCTGAGAACAGCAGAAA 587783985 168456 NM_133433.3(NIPBL):c.5862+1G>A NIPBL Feb 08, 2013 MedGen:CN029798,OMIM:122470 Cornelia de Lange syndrome 1 germline 5 37027413 TATGACTGGTTTGAGCAACTGCTTCAAAACGTGAGTGTTCTTTTGACTCCTGATAACCTAA 61664582 77211 NM_000526.4(KRT14):c.1231G>A (p.Glu411Lys) KRT14 Dec 19, 2016 MedGen:CN517202 not provided germline 17 41583278 CTGCTGGACGTGAAGACGCGGCTGGAGCAGGAGATCGCCACCTACCGCCGCCTGCTGGAGG 387906587 38546 NM_001458.4(FLNC):c.577G>A (p.Ala193Thr) FLNC Apr 24, 2017 MedGen:C3279722,OMIM:614065,Orphanet:ORPHA63273;MedGen:CN517202 Myopathy, distal, 4;not provided germline 7 128835550 CGTGACTGGCAGGACGGCAAAGCTCTGGGCGCCCTGGTGGACAACTGCGCCCCCGGTGAGT 587778778 76742 NM_000784.3(CYP27A1):c.1184G>A (p.Arg395His) CYP27A1 Aug 01, 2013 MedGen:C0238052,OMIM:213700,Orphanet:ORPHA909,SNOMED CT:63246000 Cholestanol storage disease not provided 2 218814187 TGCTCAAAGCTGTGCTTAAGGAGACTCTGCGGTAGGACAGAATGCTGTTCTGGGGGGCACA -1 469865 NM_152296.4(ATP1A3):c.2408G>A (p.Gly803Asp) ATP1A3 Jun 27, 2017 MedGen:C1868681,OMIM:128235,Orphanet:ORPHA71517 Dystonia 12 germline 19 41970398 GCACCATCACCATCCTCTGCATCGATCTGGGCACTGACATGGTGAGCCCTGGCAGCCACCC 1057521144 379200 NM_000444.5(PHEX):c.849+1G>A PHEX Jan 30, 2017 MedGen:CN517202 not provided germline X 22094100 GTGCTCAGATTGGAAATTAAGATAGCTGAGGTAAGTCTTCACTGAAAATCTCTTTCTTTCC 1057517699 359191 NM_001010874.4(TECRL):c.331+1G>A TECRL Oct 18, 2017 Gene:100653371,MedGen:C3151463,OMIM:614021 Ventricular tachycardia, catecholaminergic polymorphic, 3 germline 4 64328511 CTTCTCGAGTTGGTCTGCAGCTAGAATGTGGTAAGAAGCATTTTTCACTGATGTGTTTATT 775146234 150320 NM_002085.4(GPX4):c.476+5G>A GPX4 Jul 01, 2014 MedGen:C1855229,OMIM:250220,Orphanet:ORPHA93317 Spondylometaphyseal dysplasia Sedaghatian type germline 19 1105814 CCCAAGGGCAAGGGCATCCTGGGAAAGTGCGTGACCTCTGGGGACAGTACGGCTGCTGGGG 886039315 260040 NM_000059.3(BRCA2):c.1185G>A (p.Trp395Ter) BRCA2 Nov 16, 2015 MedGen:CN517202 not provided germline 13 32332663 GGAAGTTGTACCGTCTTTGGCCTGTGAATGGTCTCAACTAACCCTTTCAGGTCTAAATGGA 137854444 15820 NM_198488.3(FAM83H):c.1379G>A (p.Trp460Ter) FAM83H Apr 01, 2009 MedGen:C0399376,OMIM:130900,Orphanet:ORPHA100032,SNOMED CT:109471001 Amelogenesis imperfecta, hypocalcification type germline 8 143728082 GTGACCAGCTCTACCAGCAGCAGTACCAGTGGGACCCGCAGCTCACGCCGGCGCGCCCGCA 116840789 23320 NM_033337.2(CAV3):c.136G>A (p.Ala46Thr) CAV3 Sep 07, 2016 Human Phenotype Ontology:HP:0003236,MedGen:C0241005,OMIM:123320;MedGen:C1832567,OMIM:607801,Orphanet:ORPHA265;MedGen:C1832560;MedGen:CN517202 Creatine phosphokinase, elevated serum;Limb-girdle muscular dystrophy, type 1C;Rippling muscle disease 2;not provided de novo;germline 3 8745547 CCCCTGCAGGTGGATTTTGAAGACGTGATCGCAGAGCCTGTGGGCACCTACAGCTTTGACG 1057517845 360647 NM_000377.2(WAS):c.777+1G>A WAS Mar 01, 2017 MedGen:C1845987,OMIM:300299,Orphanet:ORPHA86788;MedGen:C1839163,OMIM:313900,Orphanet:ORPHA852;MedGen:C0043194,OMIM:277970,OMIM:301000,Orphanet:ORPHA906,SNOMED CT:36070007;MedGen:CN517202 Severe congenital neutropenia X-linked;Thrombocytopenia, X-linked;Wiskott-Aldrich syndrome;not provided germline X 48688097 GTGGGGTGGGACCCCCAGAATGGATTTGACGTGAGTAACTTCAGAGTCTCTTGGACTCCAC 267606715 100013 NM_003159.2(CDKL5):c.533G>A (p.Arg178Gln) CDKL5 Apr 14, 2017 MedGen:C1839333,OMIM:300672;MedGen:CN517202 Early infantile epileptic encephalopathy 2;not provided de novo;germline X 18584332 ACACAGAGTACGTTGCCACCAGATGGTATCGGTCCCCAGAACTCTTACTTGGGTGAGTTAC 200834568 166433 NM_012082.3(ZFPM2):c.779G>A (p.Arg260Gln) ZFPM2 Jul 15, 2014 MedGen:C4015129,OMIM:616067 46,XY sex reversal 9 germline 8 105798763 TCCCTTGCAAGTCCTGTGGCATCTGGTATCGGAGTGAGCGGAATCTGCAGGCCCATTTGAT 57872071 29671 NM_057088.2(KRT3):c.1525G>A (p.Glu509Lys) KRT3 Jun 01, 1997 Human Phenotype Ontology:HP:0007755,MedGen:C0339277,OMIM:122100,Orphanet:ORPHA98954,SNOMED CT:1674008;MedGen:CN517202 Meesman's corneal dystrophy;not provided germline 12 52791216 ATCGCCACCTACCGCAAGCTGCTGGAGGGCGAGGAGTACAGGTGAGCCTCCAGTCCCGTCT 267606997 21861 NM_058216.2(RAD51C):c.773G>A (p.Arg258His) RAD51C Jul 21, 2017 MedGen:C3150653,OMIM:613390;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Fanconi anemia, complementation group O;Hereditary cancer-predisposing syndrome;not provided germline 17 58709926 TTCGTCATGACCTAGATGACCTGTCTCTTCGTACTCGGTTATTAAATGGCCTAGCCCAGCA 267606798 51541 NM_000138.4(FBN1):c.4781G>A (p.Gly1594Asp) FBN1 Jun 01, 2009 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:C1861456,OMIM:184900,Orphanet:ORPHA2833 Marfan syndrome;Stiff skin syndrome germline 15 48465825 AGTACAAAATTCTTTGTCCTGGAGGGGAAGGTTTCCGACCAAATCCTATCACCGTTATATT -1 440153 NM_001080463.1(DYNC2H1):c.6116G>A (p.Arg2039His) DYNC2H1 Jun 01, 2017 MedGen:CN674505 Short-rib polydactyly syndrome type III paternal 11 103177797 GGTCTGATGGTGTTTTGACAAATAGTGCTCGTCAAGTGGTTCGGGAACCTCAAGGTTAGTC 180177307 186791 NM_012203.1(GRHPR):c.337G>A (p.Glu113Lys) GRHPR Nov 27, 2014 MedGen:C0268165,OMIM:260000,Orphanet:ORPHA93599,SNOMED CT:40951006 Primary hyperoxaluria, type II germline;unknown 9 37426587 ACCCCAGATGTCCTGACAGATACCACCGCCGAACTCGCAGTCTCCCTGCTACTTACCACCT 754637718 20087 NM_015665.5(AAAS):c.251G>A (p.Trp84Ter) AAAS Dec 01, 2008 MedGen:C1856419 Achalasia-alacrima syndrome germline 12 53320565 AGCAAGTGTGGAAGAGATGCATCAACATTTGGTGAGGCATGGCAAAGGGTTTCCTGGGTCA 886042705 267995 NM_001849.3(COL6A2):c.901G>A (p.Gly301Ser) COL6A2 Oct 02, 2015 MedGen:CN029274,OMIM:158810 Bethlem myopathy 1 germline 21 46116377 ACTAATGCCCCTCTCTCCTCCTGCCCCCAGGGCGTTCCTGGCTTCAAAGGAGAGAAGGTGA 137852491 25087 NM_000194.2(HPRT1):c.134G>A (p.Arg45Lys) HPRT1 Jun 01, 1990 MedGen:C0023374,OMIM:300322,SNOMED CT:10406007 Lesch-Nyhan syndrome germline X 134473465 TGTTTATTCCTCATGGACTAATTATGGACAGGTAAGTAAGATCTTAAAATGAGGTTTTTTA 886040935 262826 NM_000059.3(BRCA2):c.6937+1G>A BRCA2 Oct 02, 2015 MedGen:C2675520,OMIM:612555 Breast-ovarian cancer, familial 2 germline 13 32344654 CCTTAAAGGCTTCAAAAAGCACTCCAGATGGTAAAATTAGCTTTTTATTTATATCTGTTCT 1057516033 353900 NM_012330.3(KAT6B):c.3664+1G>A KAT6B May 05, 2015 MedGen:C1863557,OMIM:603736,Orphanet:ORPHA3047 Young Simpson syndrome de novo 10 75025250 ATTGCTTCAAGAATGCTGACCCTTGTAGAAGTAAGTAGAGGAATGATAAAAACCTTACCCT 773539041 442173 NM_000435.2(NOTCH3):c.350G>A (p.Cys117Tyr) NOTCH3 Sep 30, 2016 MedGen:CN517202 not provided germline 19 15192289 ACCCTGTCCTGGTCCCTCCAGGCCCTGACTGCTCCCTGCCAGATCCCTGCCTCAGCAGCCC 121434527 33316 NM_001613.2(ACTA2):c.773G>A (p.Arg258His) ACTA2 Oct 21, 2016 MedGen:C2673186,OMIM:611788;MedGen:C3279690,OMIM:614042;MedGen:CN517202 Aortic aneurysm, familial thoracic 6;Moyamoya disease 5;not provided germline 10 88939542 AAGTGATCACCATCGGAAATGAACGTTTCCGCTGCCCAGAGACCCTGTTCCAGCCATCCTT 540255320 214347 NM_001244189.1(KIAA0586):c.3303G>A (p.Pro1101=) KIAA0586 Sep 01, 2015 MedGen:C4084822,OMIM:616490 Joubert syndrome 23 unknown 14 58482712 GGATGCTTCAACAAATGAAACATATTTGCCGGTATGGGGAATTTTTGAGACATTTATTGAA 143746450 405524 NM_014362.3(HIBCH):c.809+1G>A HIBCH Mar 03, 2017 MedGen:CN517202 not provided germline 2 190246153 ACTTGAGGAACACATGGACAAAATAAACAGGTACCTAAAAAGAGATCTCAGTTATATATTC 757754120 429328 NM_000372.4(TYR):c.880G>A (p.Glu294Lys) TYR Mar 15, 2016 MedGen:C0268494,OMIM:203100,Orphanet:ORPHA79431,SNOMED CT:6483008 Tyrosinase-negative oculocutaneous albinism germline 11 89191262 AGCCATCAGTCTTTATGCAATGGAACGCCCGAGGGACCTTTACGGCGTAATCCTGGAAACC 80356908 68776 NM_007294.3(BRCA1):c.1058G>A (p.Trp353Ter) BRCA1 Sep 08, 2016 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145;MedGen:CN517202 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome;not provided germline 17 43094473 ATGCTGATCCCCTGTGTGAGAGAAAAGAATGGAATAAGCAGAAACTGCCATGCTCAGAGAA 1057519440 362170 NM_018094.4(GSPT2):c.1021G>A (p.Val341Ile) GSPT2 - Gene:100188832,Human Phenotype Ontology:HP:0000717,MedGen:C0004352,OMIM:209850,SNOMED CT:43614003;Human Phenotype Ontology:HP:0000750,MedGen:C0454644;Human Phenotype Ontology:HP:0001250,MedGen:C0036572 Autistic disorder of childhood onset;Delayed speech and language development;Seizures de novo X 51744647 GAACATGCGATGTTGGCAAAAACGGCAGGGGTAAAACATTTAATAGTGCTTATTAATAAGA 62635018 25560 NM_000273.2(GPR143):c.104G>A (p.Gly35Asp) GPR143 Nov 01, 1998 MedGen:C0342684,OMIM:300500,Orphanet:ORPHA54,SNOMED CT:78642008;MedGen:CN517202 Ocular albinism, type I;not provided germline X 9765714 AGCCGCGGGCCTTCCACGCGCTCTGCCTGGGCAGCGGCGGGCTCCGCTTGGCGCTGGGCCT 750294638 359706 NM_000165.4(GJA1):c.605G>A (p.Arg202His) GJA1 Dec 01, 2016 MedGen:CN517202 not provided germline 6 121447452 GCCCACATCAGGTGGACTGTTTCCTCTCTCGCCCCACGGAGAAAACCATCTTCATCATCTT 875989859 227873 NM_000016.5(ACADM):c.347G>A (p.Cys116Tyr) ACADM Feb 20, 2015 MedGen:C0220710,OMIM:201450,Orphanet:ORPHA42,SNOMED CT:128596003 Medium-chain acyl-coenzyme A dehydrogenase deficiency germline 1 75733588 GTTTAATTAGTGAAGAATTGGCTTATGGATGTACAGGGGTTCAGACTGCTATTGAAGGAAA 121908671 21322 NM_002335.3(LRP5):c.640G>A (p.Ala214Thr) LRP5 Mar 01, 2003 MedGen:C0432273,OMIM:144750,Orphanet:ORPHA2790,SNOMED CT:254131007 Worth disease germline 11 68357801 CTGGAGGAGCAGAAGCTCTACTGGGCTGACGCCAAGCTCAGCTTCATCCACCGTGCCAACC 879253766 244029 NM_015359.4(SLC39A14):c.1147G>A (p.Gly383Arg) SLC39A14 Mar 13, 2017 MedGen:C4310765,OMIM:617013 Hypermanganesemia with dystonia 2 germline 8 22416280 ATCCTCTGTGAGGAGTTCCCACATGAGCTAGGTAAGCGTGCGTCCCCCGTTCCACTGGTGC 398124354 101845 NM_020366.3(RPGRIP1):c.2775G>A (p.Trp925Ter) RPGRIP1 Oct 24, 2013 MedGen:CN517202 not provided germline 14 21327687 CAACGGATCTATTCAAGTGCAACTGGATTGGAAGTTTCCCTACATACCCCCTGAGAGCTTC 138642840 71221 NM_017739.3(POMGNT1):c.1539+1G>A POMGNT1 Aug 25, 2016 MedGen:CN227268,Orphanet:ORPHA352687;MedGen:C3150412,OMIM:613151;MedGen:C3150417,OMIM:613157,Orphanet:ORPHA206564;MedGen:C0457133,OMIM:253280,Orphanet:ORPHA588,SNOMED CT:277950001;MedGen:CN239299;MedGen:CN517202 Congenital muscular alpha-dystroglycanopathy with brain and eye anomalies;Congenital muscular dystrophy-dystroglycanopathy with mental retardation, type B3;Limb-girdle muscular dystrophy-dystroglycanopathy, type C3;Muscle eye brain disease;POMGNT1-Related Disorders;not provided germline;unknown 1 46192097 GTCGGCCTCAACATGAATGGCTACTTTCACGTGAGTGGGAGGCAGGGAGCAGGGCACAGTG 730882163 181308 NM_001137601.2(ZBTB42):c.1190G>A (p.Arg397His) ZBTB42 Mar 09, 2015 MedGen:C4015686,OMIM:616248 Lethal congenital contracture syndrome 6 germline 14 104802387 AGAAGCCGCATGCCTGCCGGTGGTGTGAGCGCCGTTTCACGCAGTCCGGGGACCTCTACCG 587783834 169994 NM_000252.2(MTM1):c.549G>A (p.Trp183Ter) MTM1 Apr 26, 2013 MedGen:C0410203,OMIM:310400,Orphanet:ORPHA596,SNOMED CT:46804001 Severe X-linked myotubular myopathy germline X 150641289 TTCCTCACAGGGCTTGCCCAATCACCATTGGAGAATAACTTTTATTAATAAGTGCTATGAG 765427574 274247 NM_213599.2(ANO5):c.1406G>A (p.Trp469Ter) ANO5 Aug 05, 2016 MedGen:C1969785,OMIM:611307,Orphanet:ORPHA206549 Limb-girdle muscular dystrophy, type 2L germline 11 22257753 ACTTTCTTTCAGGAGCCACAGTGACATTATGGGTGAGCATTTCTTTAAAAATTGCTATAAT 58645997 188166 NM_002055.4(GFAP):c.1090G>A (p.Ala364Thr) GFAP Jan 08, 2015 MedGen:C0270726,OMIM:203450,Orphanet:ORPHA58,SNOMED CT:81854007 Alexander's disease germline 17 44911273 AATGTCAAGCTGGCCCTGGACATCGAGATCGCCACCTACAGGAAGCTGCTAGAGGGCGAGG 145754412 211885 NM_017827.3(SARS2):c.30G>A (p.Trp10Ter) SARS2 Jun 13, 2017 MedGen:CN517202 not provided germline 19 38930707 GATGGCTGCGTCCATGGCGCGGCGCTTGTGGCCTTTGCTGACTCGTCGGGGGTTCCGGCCC 199472912 78104 NM_000238.3(KCNH2):c.1501G>A (p.Asp501Asn) KCNH2 Dec 28, 2016 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MeSH:D008133,MedGen:C0023976,SNOMED CT:9651007;MedGen:CN517202 Congenital long QT syndrome;Long QT syndrome;not provided germline 7 150952481 GTCCACTACTTCAAGGGCTGGTTCCTCATCGACATGGTGGCCGCCATCCCCTTCGACCTGC 61748520 105341 NM_000350.2(ABCA4):c.6342G>A (p.Val2114=) ABCA4 Aug 29, 2016 MeSH:C535804,MedGen:C1855465,OMIM:248200;MedGen:CN517202 Stargardt disease 1;not provided germline;unknown 1 94001046 GGCACGCCGCATGCTGTGGAACGTCATCGTGAGCATCATCAGAGAAGGGAGGGCTGTGGTC 760101382 203539 NM_000156.5(GAMT):c.491G>A (p.Gly164Asp) GAMT Oct 13, 2014 MedGen:CN517202 not provided germline 19 1398995 ACCACGCCTTTCGCCTGCTGAAGCCGGGGGGCGTCCTCACCTACTGCAACCTCACCTCCTG 1057517920 359882 NM_000256.3(MYBPC3):c.1458G>A (p.Trp486Ter) MYBPC3 Dec 02, 2016 MedGen:CN517202 not provided germline 11 47342744 ACAGCACTTGCCACCCACCCACCCGGCTAGGCTGAAGGACGGGGTGGAGCTGACCCGGGAG 119103228 16947 NM_000411.6(HLCS):c.1711G>A (p.Asp571Asn) HLCS Feb 01, 1999 MedGen:C0268581,OMIM:253270,Orphanet:ORPHA79242 Holocarboxylase synthetase deficiency germline 21 36759811 GATATCAACTTACGAGTGAAGTGGCCCAACGATATTTATTACAGTGACCTCATGAAGATCG 587779506 106949 NM_000090.3(COL3A1):c.3039+1G>A (p.Asp1013_Gly1014insMSSSFYSTSQ) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189005458 GCTGGTACAGCTGGTGAACCTGGAAGAGATGTGAGTAGCAGTTTTTATTCAACCAGCCAGG 367543041 34326 NM_007375.3(TARDBP):c.1144G>A (p.Ala382Thr) TARDBP Apr 27, 2017 MedGen:C2677565,OMIM:612069;MedGen:C3150170;MedGen:CN517202 Amyotrophic lateral sclerosis type 10;FRONTOTEMPORAL DEMENTIA WITH TDP43 INCLUSIONS, TARDBP-RELATED;not provided germline 1 11022553 AACTCTTATAGTGGCTCTAATTCTGGTGCAGCAATTGGTTGGGGATCAGCATCCAATGCAG 587776351 165476 NM_000059.3(BRCA2):c.8490G>A (p.Trp2830Ter) BRCA2 Oct 18, 2016 MedGen:C2675520,OMIM:612555;MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006 Breast-ovarian cancer, familial 2;Familial cancer of breast germline;somatic 13 32370958 TTTTGGTGTGTGTAACACATTATTACAGTGGATGGAGAAGACATCATCTGGATTATACATA 119103231 16950 NM_000411.6(HLCS):c.1648G>A (p.Val550Met) HLCS Sep 27, 2016 MedGen:C0268581,OMIM:253270,Orphanet:ORPHA79242;MedGen:CN517202 Holocarboxylase synthetase deficiency;not provided germline 21 36765044 TTTGTCCAGCATCTGATGTCCGTGGCTGTCGTGGAAGCAGTGAGGTCCATTCCCGAGTATC 875989906 228144 NM_000527.4(LDLR):c.661G>A (p.Asp221Asn) LDLR Dec 16, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline;unknown 19 11105567 CACTCCAGCTGGCGCTGTGATGGTGGCCCCGACTGCAAGGACAAATCTGACGAGGAAAACT 104893837 31063 NM_000406.2(GNRHR):c.785G>A (p.Arg262Gln) GNRHR May 16, 2017 Human Phenotype Ontology:HP:0000044,MedGen:C0271623,OMIM:146110,Orphanet:ORPHA181387,SNOMED CT:33927004;MedGen:CN517202 Hypogonadotropic hypogonadism 7 with or without anosmia;not provided germline 4 67740682 ATCAGTCCAAGAACAATATACCAAGAGCACGGCTGAAGACTCTAAAAATGACGGTTGCATT -1 466532 NM_000267.3(NF1):c.3144G>A (p.Trp1048Ter) NF1 Apr 16, 2017 MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003 Neurofibromatosis, type 1 germline 17 31230872 GAATAAGATGGTAGAATACCTGACAGACTGGGTTATGGGAACATCAAACCAAGCAGCAGAT 199476102 23248 NM_001009944.2(PKD1):c.12420G>A (p.Trp4140Ter) PKD1 Sep 01, 1999 MedGen:C0085413,OMIM:173900,SNOMED CT:28728008 Polycystic kidney disease, adult type germline 16 2090309 GGAGTTGTTCCTGCGCAGGCTGCGCCTCTGGATGGGCCTCAGCAAGGTCAAGGAGGTGGGT 80338834 29112 NM_002473.5(MYH9):c.5521G>A (p.Glu1841Lys) MYH9 Apr 05, 2011 MedGen:C0403445,OMIM:153640,SNOMED CT:236422008;MedGen:CN073381,Orphanet:ORPHA182050;MedGen:C0340978,OMIM:155100 Fechtner syndrome;MYH9 related disorders;May-Hegglin anomaly germline 22 36284474 CAGGCAGCCTGCAAACAGGTGCGTCGGACCGAGAAGAAGCTGAAGGATGTGCTGCTGCAGG 879253773 244066 NM_002075.3(GNB3):c.1017G>A (p.Trp339Ter) GNB3 Aug 12, 2016 MedGen:C4310758,OMIM:617024 Night blindness, congenital stationary, type 1h germline 12 6846892 AGGTTCCTGGGACAGCTTCCTCAAAATCTGGAACTGAGGAGGCTGGAGAAAGGGAAGTGGA 755239192 264067 NM_001271208.1(NEB):c.24219+1G>A NEB Sep 10, 2015 MedGen:CN517202 not provided germline 2 151499297 GTCAAACACAATCAAGAAAACTTTAGTTCGGTATTTAAAAATAAAAAATCCCTTTAATTAT -1 442078 NM_000068.3(CACNA1A):c.2009G>A (p.Trp670Ter) CACNA1A Dec 20, 2016 MedGen:CN517202 not provided germline 19 13303865 TCCCCTTTCAGATCCTGACGGGCGAAGACTGGAACGAGGTCATGTACGACGGGATCAAGTC 750995470 32159 NM_080680.2(COL11A2):c.4392+1G>A COL11A2 Sep 01, 1994 MedGen:C1861481,OMIM:184840 Stickler syndrome, type 3 germline 6 33166512 ATTGGTCCTGGAGGTCCCCCCGGCCTCCCCGTGAGTACTGCCTCTGTTCCTCCACAAAATC 1064793745 405043 NM_206933.2(USH2A):c.3507G>A (p.Trp1169Ter) USH2A Jul 06, 2015 MedGen:CN517202 not provided germline 1 216199931 TATTGGCTCAGACTCTGTGACACTTACCTGGACAACACTCTCAAATCAATCTGGTCCCATA 869312959 226942 NM_003384.2(VRK1):c.1068+1G>A VRK1 Mar 27, 2014 MeSH:D030342,MedGen:C0950123 Inborn genetic diseases germline 14 96860736 GGAGGTTTGAAAGCAAAAACAATAACAAAGGTGAATTTTGTTATTAAATTATTCTTTGGTC 137852436 25285 NM_000132.3(F8):c.2167G>A (p.Ala723Thr) F8 Sep 29, 2016 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008;MedGen:CN169374 Hereditary factor VIII deficiency disease;not specified germline X 154931623 AACTCAGACTTTCGGAACAGAGGCATGACCGCCTTACTGAAGGTTTCTAGTTGTGACAAGA 74315450 29503 NM_001754.4(RUNX1):c.602G>A (p.Arg201Gln) RUNX1 Dec 07, 2016 MedGen:C1832388,OMIM:601399,Orphanet:ORPHA71290 Familial platelet disorder with associated myeloid malignancy germline 21 34859485 GAGCCATCAAAATCACAGTGGATGGGCCCCGAGAACCTCGAAGTAAGTGCATCCACTTGGG 879255519 178803 NM_005886.2(KATNB1):c.432+1G>A KATNB1 Feb 06, 2015 MedGen:C4015525,OMIM:616212 Lissencephaly 6, with microcephaly germline 16 57751303 AGGAGGAAAGGCTGTGTCTTCCGATACAGGGTAAGGATGCGCTCTGTCGGTGACTCCATGA 137852304 25512 NM_000032.4(ALAS2):c.514G>A (p.Ala172Thr) ALAS2 Oct 01, 1995 MedGen:C0221018,OMIM:300751,Orphanet:ORPHA98362,SNOMED CT:62677000 Hereditary sideroblastic anemia germline X 55021176 TACCGTGTGTTCAAGACTGTGAACCGCTGGGCTGATGCATATCCCTTTGCCCAACATTTCT 104894031 15101 NM_001708.2(OPN1SW):c.235G>A (p.Gly79Arg) OPN1SW Mar 01, 1992 MedGen:C0155017,OMIM:190900,Orphanet:ORPHA88629 Tritanopia germline 7 128775556 CTCAACTACATTCTGGTCAACGTGTCCTTCGGAGGCTTCCTCCTCTGCATCTTCTCTGTCT 1131692158 424285 NM_001130987.1(DYSF):c.5642G>A (p.Gly1881Asp) DYSF May 29, 2017 MedGen:C1850889,OMIM:253601,Orphanet:ORPHA268 Limb-girdle muscular dystrophy, type 2B germline 2 71669207 GGGAGAAGATGAGCGACATTTATGTGAAAGGGTAGGGAGCCAGCGTCCTCTTGCCTGTCCA 61751276 104715 NM_000329.2(RPE65):c.11+5G>A RPE65 May 03, 2017 MedGen:C1859844,OMIM:204100;MedGen:C1859844,OMIM:204100;Human Phenotype Ontology:HP:0000556,MedGen:C0854723,Orphanet:ORPHA71862,SNOMED CT:314407005;MedGen:C3151086,OMIM:613794;MedGen:CN517202 Leber congenital amaurosis 2;Leber congenital amaurosis 2;Retinal dystrophy;Retinitis pigmentosa 20;not provided germline;unknown 1 68449890 CTGAACTGGAAGAAAATGTCTATCCAGTAAGTATCTCTGGGAGACTTTTTTAAAACACCTT 773827877 268752 NM_000070.2(CAPN3):c.1333G>A (p.Gly445Arg) CAPN3 Dec 31, 2015 MedGen:C1869123,OMIM:253600,Orphanet:ORPHA267 Limb-girdle muscular dystrophy, type 2A germline 15 42399631 GAGGGCCGCTGGGTACGGGGTTGCTCTGCCGGAGGCTGCCGCAACTTCCCAGGTGGGAGAT 587777339 132640 NM_153485.2(NUP155):c.1172G>A (p.Arg391His) NUP155 Dec 12, 2008 MedGen:C4014269,OMIM:615770 Atrial fibrillation, familial, 15 germline 5 37341164 GGCCTAATACACTGACGCTGGTTCATGTCCGCTTACCTCCTGGATTCTCAGCATCTTCAAC 794728851 196990 NM_198056.2(SCN5A):c.1080G>A (p.Trp360Ter) SCN5A Aug 04, 2013 MedGen:CN517202 not provided germline 3 38606729 CGGCTACACCAGCTTCGATTCCTTTGCCTGGGCCTTTCTTGCACTCTTCCGCCTGATGACG 672601336 141328 NM_022168.3(IFIH1):c.1483G>A (p.Gly495Arg) IFIH1 Dec 01, 2014 MedGen:C3888244,OMIM:615846 Aicardi-goutieres syndrome 7 germline 2 162281369 CTGGGACTAACAGCTTCACCTGGTGTTGGAGGGGCCACGAAGCAAGCCAAAGCTGAAGAAC 397508263 271106 NM_000492.3(CFTR):c.1679+1G>A CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008;MedGen:C0238339,OMIM:167800,Orphanet:ORPHA676,SNOMED CT:68072000 Cystic fibrosis;Hereditary pancreatitis germline 7 117587834 AGGTCAACGAGCAAGAATTTCTTTAGCAAGGTGAATAACTAATTATTGGTCTAGCAAGCAT 104886247 36003 NM_000495.4(COL4A5):c.3632G>A (p.Gly1211Glu) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108668346 TAGGCCAAAAGGGTGATGGAGGATTACCTGGGATTCCAGGAAATCCTGGCCTTCCAGGTCC 111033550 32514 NM_000493.3(COL10A1):c.52G>A (p.Gly18Arg) COL10A1 Jan 01, 1997 MedGen:C0265289,OMIM:156500,Orphanet:ORPHA174,SNOMED CT:29248006 Metaphyseal chondrodysplasia, Schmid type germline 6 116125441 TTGCTGCTAGTATCCTTGAACTTGGTTCATGGAGTGTTTTACGCTGAACGATACCAAATGC 587777162 106647 NM_001958.3(EEF1A2):c.208G>A (p.Gly70Ser) EEF1A2 Apr 01, 2016 MedGen:C4225337,OMIM:616409;MedGen:CN517202 Epileptic encephalopathy, early infantile, 33;not provided germline 20 63495972 CTGGACAAGCTGAAGGCGGAGCGTGAGCGCGGCATCACCATCGACATCTCCCTCTGGAAGT 119103277 180116 NM_000551.3(VHL):c.263G>A (p.Trp88Ter) VHL Apr 25, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0019562,OMIM:193300,Orphanet:ORPHA892,SNOMED CT:46659004;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Von Hippel-Lindau syndrome;not provided germline 3 10142110 ATCGCAGTCCGCGCGTCGTGCTGCCCGTATGGCTCAACTTCGACGGCGAGCCGCAGCCCTA 199476118 24761 NC_012920.1:m.3460G>A MT-ND1 Oct 03, 2017 Human Phenotype Ontology:HP:0001112,MedGen:C0917796,OMIM:535000,Orphanet:ORPHA104,SNOMED CT:58610003;MedGen:C0023264,OMIM:256000,Orphanet:ORPHA506,SNOMED CT:29570005;MedGen:C1838979,OMIM:252010 Leber's optic atrophy;Leigh syndrome;Mitochondrial complex I deficiency germline MT 3460 CCCTACGGGCTACTACAACCCTTCGCTGACGCCATAAAACTCTTCACCAAAGAGCCCCTAA 121918140 15779 NM_203395.2(IYD):c.658G>A (p.Ala220Thr) IYD Dec 01, 2008 MedGen:C0342195,OMIM:274800,SNOMED CT:17885001 Iodotyrosine deiodination defect germline 6 150394226 CACTACTACAATGAGATCAGTGTTTCCATCGCTTGTGGCATCCTGCTAGCTGCCCTGCAGG 368953604 44266 NM_032634.3(PIGO):c.3069+5G>A PIGO Aug 01, 2012 MedGen:C3553637,OMIM:614749 Hyperphosphatasia with mental retardation syndrome 2 germline 9 35090061 AGTACCTCTTTATCCTTGGTATTCAGGTGGGTGTAGGAGAGAGATCAGGGAGTTGGTGTTT 587782989 165628 NM_001080414.3(CCDC88C):c.1391G>A (p.Arg464His) CCDC88C Sep 01, 2014 MedGen:CN219009,OMIM:616053 Spinocerebellar ataxia 40 germline;inherited 14 91321256 TGTTTGAGCTGAACGAATGTGCGTCCAGCCGCATCCTGAAGCTGGAGAAGGAGAATCAGAG -1 438545 NM_001313904.1(NFE2L2):c.12G>A (p.Gln4=) NFE2L2 Oct 30, 2017 MedGen:CN578218,OMIM:617744 IMMUNODEFICIENCY, DEVELOPMENTAL DELAY, AND HYPOHOMOCYSTEINEMIA germline 2 177234076 TTCGCTCAGTTACAACTAGATGAAGAGACAGGTGAATTTCTCCCAATTCAGCCAGCCCAGC 79658334 28984 NM_020975.4(RET):c.2410G>A (p.Val804Met) RET Aug 03, 2017 MedGen:C1275808,OMIM:209880,Orphanet:ORPHA661,SNOMED CT:399040002;MedGen:C1833921,OMIM:155240,Orphanet:ORPHA99361;MedGen:C1833921,OMIM:155240,Orphanet:ORPHA99361;MedGen:C0027672,SNOMED CT:699346009;MedGen:C2931876,OMIM:142623;MedGen:CN076152;na;MedGen:CN073359,Orphanet:ORPHA653,SNOMED CT:61808009;MeSH:D018813,MedGen:C0025268,OMIM:171400,Orphanet:ORPHA247698,SNOMED CT:61808009;MeSH:D018813,MedGen:C0025268,OMIM:171400,Orphanet:ORPHA247698,SNOMED CT:61808009;MeSH:D018814,MedGen:C0025269,OMIM:162300,Orphanet:ORPHA247709,SNOMED CT:6153000,SNOMED CT:61530001;MeSH:D018814,MedGen:C0025269,OMIM:162300,Orphanet:ORPHA247709,SNOMED CT:6153000,SNOMED CT:61530001;Human Phenotype Ontology:HP:0002666,MedGen:C0031511,OMIM:171300;MedGen:C1619700,OMIM:191830;MedGen:CN517202;MedGen:CN169374 Congenital central hypoventilation;Familial medullary thyroid carcinoma;Familial medullary thyroid carcinoma;Hereditary cancer-predisposing syndrome;Hirschsprung disease 1;MEN2 phenotype: Unclassified;MEN2A and FMTC;Multiple endocrine neoplasia, type 2;Multiple endocrine neoplasia, type 2a;Multiple endocrine neoplasia, type 2a;Multiple endocrine neoplasia, type 2b;Multiple endocrine neoplasia, type 2b;Pheochromocytoma;Renal adysplasia;not provided;not specified germline;unknown 10 43119548 TCTCCGCCCCCAGGCCCGCTCCTCCTCATCGTGGAGTACGCCAAATACGGCTCCCTGCGGG 104893772 28060 NM_000539.3(RHO):c.266G>A (p.Gly89Asp) RHO Aug 01, 1991 MedGen:C3151001,OMIM:613731 Retinitis pigmentosa 4 germline 3 129528999 TAGCCGTGGCTGACCTCTTCATGGTCCTAGGTGGCTTCACCAGCACCCTCTACACCTCTCT 763147599 360376 NM_000527.4(LDLR):c.1774G>A (p.Gly592Arg) LDLR Mar 30, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11116927 CTTCACTCCATCTCAAGCATCGATGTCAACGGGGGCAACCGGAAGACCATCTTGGAGGATG 104894325 20162 NM_020661.3(AICDA):c.203G>A (p.Trp68Ter) AICDA Sep 01, 2000 MedGen:C1720956,OMIM:605258,Orphanet:ORPHA101089 Immunodeficiency with hyper IgM type 2 germline 12 8605439 AATTGCTCTTCCTCCGCTACATCTCGGACTGGGACCTAGACCCTGGCCGCTGCTACCGCGT 587783657 169303 NM_005682.6(ADGRG1):c.1970G>A (p.Trp657Ter) ADGRG1 Feb 17, 2014 MedGen:C1847352,OMIM:606854,Orphanet:ORPHA101070 Polymicrogyria, bilateral frontoparietal germline 16 57663470 CACTGCCCGCAGGCTTCCTCATCTTCATCTGGTACTGGTCCATGCGGCTGCAGGCCCGGGG -1 486941 NM_000551.3(VHL):c.278G>A (p.Gly93Asp) VHL Feb 04, 2016 MedGen:C0019562,OMIM:193300,Orphanet:ORPHA892,SNOMED CT:46659004 Von Hippel-Lindau syndrome germline 3 10142125 TCGTGCTGCCCGTATGGCTCAACTTCGACGGCGAGCCGCAGCCCTACCCAACGCTGCCGCC 587779478 106918 NM_000090.3(COL3A1):c.809G>A (p.Gly270Glu) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188991014 TGGTTTTATACATTTCCTAGGGCTTCGATGGACGAAATGGAGAAAAGGGTGAAACAGGTGC 1135402918 425267 NM_000574.4(CD55):c.287-1G>A CD55 Aug 11, 2017 Human Phenotype Ontology:HP:0002243,MedGen:C0033680,OMIM:226300 Enteropathy, protein-losing germline 1 207324558 TTTTTGTTGCTGCTTTTGTTAATACTTTTAGGTAGCTGCGAGGTGCCAACAAGGCTAAATT 199472709 67755 NM_000218.2(KCNQ1):c.692G>A (p.Arg231His) KCNQ1 Jun 20, 2017 MedGen:C1837014,OMIM:607554;MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MeSH:D008133,MedGen:C0023976,SNOMED CT:9651007;MedGen:C0035828,OMIM:192500,Orphanet:ORPHA101016,SNOMED CT:20852007;MedGen:CN517202 Atrial fibrillation, familial, 3;Congenital long QT syndrome;Long QT syndrome;Long QT syndrome 1;not provided germline 11 2572021 CCCCACACCATCTCCTTCGCAGGGGCATCCGCTTCCTGCAGATCCTGAGGATGCTACACGT 267607832 221403 NM_000249.3(MLH1):c.1558+1G>A MLH1 Oct 11, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0009405,Orphanet:ORPHA443090 Hereditary cancer-predisposing syndrome;Hereditary nonpolyposis colon cancer germline 3 37028933 AGGAAGAAATTAATGAGCAGGGACATGAGGGTACGTAAACGCTGTGGCCTGCCTGGGATGC 193922289 44873 NM_000162.3(GCK):c.214G>A (p.Gly72Arg) GCK Apr 04, 2016 MedGen:C1841962,OMIM:125851;MedGen:CN517202 Maturity-onset diabetes of the young, type 2;not provided germline 7 44152420 GACACACTTCTCTCTGTGCCTTTAGAAGTCGGGGACTTCCTCTCCCTGGACCTGGGTGGCA 140365820 428912 NM_000550.2(TYRP1):c.1261+1G>A TYRP1 Nov 23, 2016 Human Phenotype Ontology:HP:0001022,MedGen:C0001916;MedGen:C1859932,OMIM:203290 Albinism;Oculocutaneous albinism type 3 germline;unknown 9 12704706 TTGATGAATGGCTGAGGAGATACAATGCTGGTAAGACATTTTCATATGCCTTTTGCATGCT 376610445 480564 NM_021067.4(GINS1):c.455G>A (p.Cys152Tyr) GINS1 Jan 09, 2018 MedGen:CN737162,OMIM:617827 IMMUNODEFICIENCY 55 germline 20 25441709 ACATCTCTCATTTTTTCTTTCAGGTCCGGTGTCTAAAAGACTATGGAGAATTTGAAGTTGA 863223293 24582 NM_000246.3(CIITA):c.2063G>A (p.Trp688Ter) CIITA Feb 01, 2002 MedGen:C1859534 Bare lymphocyte syndrome type 2, complementation group A germline 16 10907555 ACCAGTTCCCATCCGCAGACGTGAGGACCTGGGCGATGGCCAAAGGCTTAGTCCAACACCC 1057521094 369463 NM_000162.3(GCK):c.364-1G>A GCK Oct 05, 2016 MedGen:CN517202 not provided germline 7 44151076 CCAGATGGTCACCATGGCGTGCATCTTCCAGCTCTTCGACTACATCTCTGAGTGCATCTCC 377767397 36239 NM_020630.4(RET):c.1832G>A (p.Cys611Tyr) RET Jun 17, 2017 MedGen:C0027672,SNOMED CT:699346009;na;MedGen:CN517202 Hereditary cancer-predisposing syndrome;MEN2A and FMTC;not provided germline 10 43113628 GGATTAAAGCTGGCTATGGCACCTGCAACTGCTTCCCTGAGGAGGAGAAGTGCTTCTGCGA 730880818 179479 NM_000257.3(MYH7):c.5410G>A (p.Ala1804Thr) MYH7 Mar 18, 2013 MedGen:CN517202 not provided germline 14 23415144 CAGCACCGGCTGGACGAAGCCGAGCAGATCGCCCTCAAGGGCGGCAAGAAGCAGCTGCAGA 121918030 28616 NM_000301.3(PLG):c.704G>A (p.Arg235His) PLG May 15, 1999 MedGen:C1968804,OMIM:217090,Orphanet:ORPHA722 Plasminogen deficiency, type I germline 6 160716680 CAAACAAGAACCTGAAGAAGAATTACTGTCGTAACCCCGATAGGGAGCTGCGGCCTTGGTG 121917885 24121 NM_022788.4(P2RY12):c.767G>A (p.Arg256Gln) P2RY12 Jun 14, 2017 MedGen:C1853278,OMIM:609821,Orphanet:ORPHA36355 Platelet-type bleeding disorder 8 germline 3 151338079 TTATTTGTTTTGTTCCTTTCCATTTTGCCCGAATTCCTTACACCCTGAGCCAAACCCGGGA 863223412 210232 NM_000020.2(ACVRL1):c.986G>A (p.Arg329His) ACVRL1 Jul 12, 2017 MedGen:C1838163,OMIM:600376;MedGen:CN517202 Hereditary hemorrhagic telangiectasia type 2;not provided germline 12 51915438 GTACACAGGGCAAACCAGCCATTGCCCACCGCGACTTCAAGAGCCGCAATGTGCTGGTCAA 587777790 166218 NM_006218.3(PIK3CA):c.353G>A (p.Gly118Asp) PIK3CA May 31, 2016 MedGen:C0007112;MedGen:C0278701;MedGen:C3554518,OMIM:615108;Human Phenotype Ontology:HP:0100843,MeSH:D005909,MedGen:C0017636,SNOMED CT:63634009;MedGen:C0153574,Orphanet:ORPHA213569;Human Phenotype Ontology:HP:0030692,MeSH:D001932,MedGen:C0006118,SNOMED CT:126952004;Human Phenotype Ontology:HP:0100013,MeSH:D001943,MedGen:C1458155,Orphanet:ORPHA180250,SNOMED CT:126926005;Human Phenotype Ontology:HP:0100031,MeSH:D013964,MedGen:C0040136,Orphanet:ORPHA100087;Human Phenotype Ontology:HP:0006725,MedGen:C0281361;Human Phenotype Ontology:HP:0030359,MedGen:C0149782;MeSH:C535575,MedGen:C1168401,OMIM:275355,Orphanet:ORPHA67037;MeSH:D002583,MedGen:CN236667 Adenocarcinoma of prostate;Adenocarcinoma of stomach;Cowden syndrome 5;Glioblastoma;Malignant neoplasm of body of uterus;Neoplasm of brain;Neoplasm of the breast;Neoplasm of the thyroid gland;Pancreatic adenocarcinoma;Squamous cell carcinoma of lung;Squamous cell carcinoma of the head and neck;Uterine cervical neoplasms germline;somatic 3 179199690 TGTTATATTCTTTATGTAATTTTATTAAAGGTTTTGCTATCGGCATGCCAGTGTGTGAATT 869312664 225808 NM_001040142.1(SCN2A):c.4726G>A (p.Gly1576Arg) SCN2A May 08, 2014 MedGen:C3150987,OMIM:613721 Early infantile epileptic encephalopathy 11 de novo 2 165386920 ATTAATCTGGTGTTTATTGTTCTGTTCACTGGAGAATGTGTGCTGAAACTGATCTCTCTTC 137852618 24510 NM_000211.4(ITGB2):c.817G>A (p.Gly273Arg) ITGB2 Sep 29, 2016 MedGen:C0272187;MedGen:CN517202 Leukocyte adhesion deficiency;not provided germline 21 44900400 ACTGATGACGGCTTCCATTTCGCGGGCGACGGGAAGCTGGGCGCCATCCTGACCCCCAACG 74315483 18130 NM_000487.5(ARSA):c.763G>A (p.Glu255Lys) ARSA Sep 09, 2016 MedGen:C0023522,OMIM:250100,Orphanet:ORPHA512,SNOMED CT:396338004;MedGen:C0751278,Orphanet:ORPHA309256;MedGen:CN517202 Metachromatic leukodystrophy;Metachromatic leukodystrophy, late infantile;not provided germline;unknown 22 50626682 GGCCGCGGGCCATTTGGGGACTCCCTGATGGAGCTGGATGCAGCTGTGGGGACCCTGATGA 879255514 59386 NM_000419.4(ITGA2B):c.3077G>A (p.Arg1026Gln) ITGA2B May 03, 2013 MedGen:C1861195,OMIM:187800 Platelet-type bleeding disorder 16 germline 17 44372407 CCGTGTACCCCCAGGTCGGCTTCTTCAAGCGGAACCGGCCACCCCTGGAAGAAGATGATGA 72656306 32339 NM_000088.3(COL1A1):c.3271G>A (p.Gly1091Ser) COL1A1 Oct 03, 1997 MedGen:C0268360,OMIM:166210,SNOMED CT:86470003 Osteogenesis imperfecta, recessive perinatal lethal germline 17 50187974 TTGTCCCTTTCTCTCTTCTAGGGACCCCAAGGCCCCCGTGGTGACAAGGGTGAGACAGGCG 879253909 245188 NM_000166.5(GJB1):c.541G>A (p.Val181Met) GJB1 Mar 24, 2015 MedGen:CN517202 not provided germline X 71224248 TACCCCTGCCCCAACACAGTGGACTGCTTCGTGTCCCGCCCCACCGAGAAAACCGTCTTCA 387906659 38759 NM_001626.5(AKT2):c.49G>A (p.Glu17Lys) AKT2 Oct 28, 2011 MedGen:C3278384 Hypoinsulinemic hypoglycemia and hemihypertrophy germline 19 40257052 CTCTCCCTCCCTTCCTGCCTCATTTCAGGTGAATACATCAAGACCTGGAGGCCACGGTACT 397515404 48194 NM_020822.2(KCNT1):c.1421G>A (p.Arg474His) KCNT1 Apr 22, 2017 MedGen:C3554195,OMIM:614959;MedGen:C3554195,OMIM:614959;MedGen:C3554306,OMIM:615005;MedGen:CN517202 Early infantile epileptic encephalopathy 14;Early infantile epileptic encephalopathy 14;Epilepsy, nocturnal frontal lobe, 5;not provided de novo;germline 9 135768848 CACCCCGCCAGGACCACCAGACCATCCTGCGCGCCTGGGCCGTGAAGGACTTCGCCCCCAA 193929373 33930 NM_000162.3(GCK):c.790G>A (p.Gly264Ser) GCK Jul 05, 2011 MedGen:C1833104,OMIM:606176,Orphanet:ORPHA99885 Permanent neonatal diabetes mellitus not provided 7 44147723 AATACCGAGTGGGGCGCCTTCGGGGACTCCGGCGAGCTGGACGAGTTCCTGCTGGAGTATG 72658186 441159 NM_000089.3(COL1A2):c.2332G>A (p.Gly778Ser) COL1A2 May 12, 2017 MedGen:CN517202 not provided germline 7 94421045 AATGGTCCCCCCGGTCCTGCTGGAAGTCGTGGTGATGGAGGCCCCCCTGTGAGTATTTACA 267607001 15308 NM_001134363.2(RBM20):c.1901G>A (p.Arg634Gln) RBM20 May 01, 2017 MedGen:C2750995,OMIM:613172;MedGen:CN517202 Dilated cardiomyopathy 1DD;not provided germline 10 110812298 TCCCTCACAGATATGGCCCAGAAAGGCCGCGGTCTCGTAGTCCGGTGAGCCGGTCACTCTC 80338911 34211 NM_003221.3(TFAP2B):c.601+5G>A TFAP2B Jan 02, 2013 MedGen:C1868570,OMIM:169100,Orphanet:ORPHA46627;MedGen:C4284595,OMIM:617035 Char syndrome;Patent ductus arteriosus 2 germline 6 50828684 ATTGGACCAGTCTGTCATTAAAAAAGGTATGGATAATTCCCCCCAAAAAGTAAGCAAAGTT 573750741 273146 NM_000067.2(CA2):c.232+1G>A CA2 Jul 15, 2016 MedGen:C0345407,OMIM:259730,SNOMED CT:254122007 Osteopetrosis with renal tubular acidosis germline 8 85465470 TGGAGTTTGATGACTCTCAGGACAAAGCAGGTCAGTGTTTAGAAAATAACTTGTGTCTTTT 775288140 359487 NM_000094.3(COL7A1):c.682+1G>A COL7A1 Jun 18, 2017 MedGen:C0079474,OMIM:226600,SNOMED CT:48528004;MedGen:CN517202 Recessive dystrophic epidermolysis bullosa;not provided germline;inherited 3 48593101 CTGCTGGTGGCGTGCCTGTGACCCGACCTCGTGAGTTCCTGCCCACACGGTGTACCCTGAC 121912466 29779 NM_000213.4(ITGB4):c.2792G>A (p.Gly931Asp) ITGB4 May 01, 2000 MedGen:C0268374,OMIM:226650,Orphanet:ORPHA89840,SNOMED CT:33662006 Adult junctional epidermolysis bullosa germline 17 75742591 CACCTCCGAACCCCCACCCAGACGCCCGGGGCATGGTGGAGTTCCAGGAGGGCGTGGAGCT 1085307426 414406 NM_000020.2(ACVRL1):c.1436G>A (p.Arg479Gln) ACVRL1 Feb 16, 2017 MedGen:C1838163,OMIM:600376;MedGen:C0152171,OMIM:178600,SNOMED CT:26174007;MedGen:CN169374 Hereditary hemorrhagic telangiectasia type 2;Primary pulmonary hypertension;not specified germline 12 51920817 GGGAGTGCTGGTACCCAAACCCCTCTGCCCGACTCACCGCGCTGCGGATCAAGAAGACACT 751440831 483115 NM_178170.2(NEK8):c.1738G>A (p.Gly580Ser) NEK8 Feb 14, 2018 MedGen:C3809434,OMIM:615415 Renal-hepatic-pancreatic dysplasia 2 germline 17 28741083 CCCCTTTCCTTCCTCTCCCCCATAGCCTCGGGTGATTGCTACACTTTTGGCAGCAATCAGC 202143236 187120 NM_001166686.1(PFKM):c.450+1G>A PFKM Oct 21, 2016 MedGen:C0017926,OMIM:232800,Orphanet:ORPHA371,SNOMED CT:89597008 Glycogen storage disease, type VII germline;unknown 12 48131394 TGGGAGAGCGTTTCGATGATGCTTCAGCTGGTATGTTCCAGAGAACTCCCTGTCCCATATT 1057519269 361751 NM_004644.4(AP3B2):c.1182G>A (p.Lys394=) AP3B2 Jan 10, 2017 MedGen:C4310637,OMIM:617276 Epileptic encephalopathy, early infantile, 48 germline 15 82679729 CACCGACCCCACCCAGATTAAGATCCTGAAGGTGAGTGAGGGACAGAAGTGCATGTGCTTC 281865025 17800 NM_024312.4(GNPTAB):c.771G>A (p.Leu257=) GNPTAB May 10, 2012 MedGen:C2673375;MedGen:C0033788,OMIM:252600,Orphanet:ORPHA423461,SNOMED CT:65764006 Mucolipidosis III alpha/beta, atypical;Pseudo-Hurler polydystrophy germline 12 101780152 GCCAGAAAATCTTTCCTCTAAAGTCAAACTGGTAAGAACATAGAAAATAGAGCAATTAGCC 199469648 106406 NM_017415.2(KLHL3):c.753+1G>A KLHL3 - Gene:7830,MedGen:C1449844,OMIM:145260,Orphanet:ORPHA757,SNOMED CT:15689008 Pseudohypoaldosteronism, type 2 germline 5 137661914 CCTCTCTTACCTAGGGACTACCTAGTCCAAGTGAGTGTTGTATGAAGAGCCAAGCACTTCT 1057524905 380271 NM_000162.3(GCK):c.680-1G>A GCK Apr 22, 2016 MedGen:CN240909 Monogenic diabetes inherited 7 44147834 TCGCTGACAGTCCCCCCGACCTCCACCCCAGGCACGGGCTGCAATGCCTGCTACATGGAGG 777313709 409033 NM_024570.3(RNASEH2B):c.437-1G>A RNASEH2B Mar 13, 2017 MedGen:CN517202 not provided germline 13 50943320 TCATTGTGCTGAGTCTTTTTTTTCTTTTAAGGTAATCCAGAAATAGACAACAAGAAATATT 1085307151 414077 NM_001204.6(BMPR2):c.38G>A (p.W13*) BMPR2 - MedGen:C0152171,OMIM:178600,SNOMED CT:26174007 Primary pulmonary hypertension germline 2 202377512 CCTCGCTGCAGCGGCCCTGGCGGGTGCCCTGGCTACCATGGACCATCCTGCTGGTCAGCAC 137852518 25025 NM_000425.4(L1CAM):c.791G>A (p.Cys264Tyr) L1CAM Aug 01, 1993 MedGen:C0265216,OMIM:307000,Orphanet:ORPHA2182,SNOMED CT:71779008 X-linked hydrocephalus syndrome germline X 153870403 CCTTGCAGGGGCAGCCATTGGTCCTGGAGTGCATCGCCGAGGGCTTGTGAGTCTGGGAACC -1 481716 NM_025009.4(CEP135):c.2594G>A (p.Trp865Ter) CEP135 Dec 15, 2017 MedGen:CN517202 not provided germline 4 56011500 TTCATAAATACATAACAGAGGTGTCACGATGGGAGAGCTTAATGGCTGCCAAGGTGAAAAA 28938171 22592 NM_001122681.1(SH3BP2):c.1259G>A (p.Gly420Glu) SH3BP2 Jun 01, 2001 MedGen:C0008029,OMIM:118400,Orphanet:ORPHA184,SNOMED CT:76098004 Fibrous dysplasia of jaw germline 4 2831588 CCTGCCCCTCCAGGCGATCACCCCCCGATGGGCAGAGTTTCAGGAGCTTCTCCTTTGAAAA 121908834 21228 NM_003680.3(YARS):c.586G>A (p.Glu196Lys) YARS Feb 01, 2006 MedGen:C1842237,OMIM:608323,Orphanet:ORPHA100045 Charcot-Marie-Tooth disease, dominant intermediate C germline 1 32797768 ATTGATCAGAGAAAGATTTTCACCTTTGCAGAGAAGGTGAGTGTCTGCTTTCCTGTCTTTT 398122399 86136 NM_002608.3(PDGFB):c.3G>A (p.Met1Ile) PDGFB Aug 14, 2017 MedGen:C3809645,OMIM:615483 Idiopathic basal ganglia calcification 5 germline 22 39243961 GCCCCGCGGGGCCGGGCCCGGAGTCGGCATGAATCGCTGCTGGGCGCTCTTCCTGTCTCTC 879255224 246637 NM_000527.4(LDLR):c.2547+1G>A LDLR Mar 25, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11129671 CACAACCAGGACGGCTACAGCTACCCCTCGGTGAGTGACCCTCTCTAGAAAGCCAGAGCCC 121913111 31390 NM_000142.4(FGFR3):c.964G>A (p.Glu322Lys) FGFR3 Oct 18, 2017 MedGen:C0699790,OMIM:114500,SNOMED CT:269533000 Carcinoma of colon somatic 4 1803725 GCGGGCGCTAACACCACCGACAAGGAGCTAGAGGTTCTCTCCTTGCACAACGTCACCTTTG 886039862 260737 NM_003611.2(OFD1):c.518-1G>A OFD1 Aug 04, 2016 MedGen:C1510460,OMIM:311200,Orphanet:ORPHA2750,SNOMED CT:52868006 Oral-facial-digital syndrome germline X 13746318 TGTCCTAATTTGATGTGTTATTTTTTAATAGCTGAGAAGCTTCAGCTTATTGATGATCAGT 869320631 226702 NM_002242.4(KCNJ13):c.158G>A (p.Trp53Ter) KCNJ13 Mar 31, 2016 MedGen:C3280062,OMIM:614186 Leber congenital amaurosis 16 germline 2 232771205 ATGCTTGGGGAATCCTAATGGACATGCGCTGGCGTTGGATGATGTTGGTCTTTTCTGCTTC 776221160 212513 NM_024577.3(SH3TC2):c.279G>A (p.Lys93=) SH3TC2 Jan 14, 2015 MedGen:CN043578 Charcot-Marie-Tooth disease, type IV germline 5 149047862 TGAGGACCAGGAGGTGCGCATGCTGTTTAAGGTGAGCATGAAGGAAACAGGTGAATGCTGA 1057518672 361177 NM_003108.3(SOX11):c.1286G>A (p.Trp429Ter) SOX11 May 01, 2016 MedGen:C4014528,OMIM:615866 Mental retardation, autosomal dominant 27 germline 2 5694007 CGGAGCTGAGCGAGATGATCGCGGGGGACTGGCTGGAGGCGAACTTCTCCGACCTGGTGTT 398123438 99085 NM_000512.4(GALNS):c.463G>A (p.Gly155Arg) GALNS Jun 13, 2013 MedGen:C0086651,OMIM:253000,Orphanet:ORPHA309297,SNOMED CT:7259005 Mucopolysaccharidosis, MPS-IV-A germline 16 88837725 CACAGGCCCCAGTTCCACCCCCTGAAGCACGGATTTGATGAGTGGTTTGGATCCCCCAACT 797044855 205253 NM_002047.3(GARS):c.373G>A (p.Glu125Lys) GARS Nov 22, 2013 MeSH:D030342,MedGen:C0950123 Inborn genetic diseases germline 7 30599995 AAAGATGATATTGTAGACCGAGCAAAAATGGAAGATACCCTGAAGAGGAGGTTTTTCTATG 80359015 67100 NM_000059.3(BRCA2):c.7886G>A (p.Trp2629Ter) BRCA2 Sep 08, 2016 MedGen:C2675520,OMIM:612555 Breast-ovarian cancer, familial 2 germline 13 32362603 GGGTTTATAATCACTATAGATGGATCATATGGAAACTGGCAGCTATGGAATGTGCCTTTCC 587784465 169451 NM_001083962.1(TCF4):c.655+1G>A TCF4 Feb 08, 2013 MedGen:C1970431,OMIM:610954,Orphanet:ORPHA2896 Pitt-Hopkins syndrome germline 18 55279550 GCACTTTCCCTAGCTCCTTCTTCATGCAAGGTAAGATGCTGCTGCTTCTGAGGGAAAGGCC 77375493 38718 NM_004972.3(JAK2):c.1849G>A (p.Val617Ile) JAK2 Mar 08, 2012 MedGen:C3281125,OMIM:614521 Thrombocythemia 3 germline 9 5073770 AAGCATTTGGTTTTAAATTATGGAGTATGTGTCTGTGGAGACGAGAGTAAGTAAAACTACA 74315423 16232 NM_001029871.3(RSPO4):c.218G>A (p.Cys73Tyr) RSPO4 Dec 01, 2006 MedGen:C0265998,OMIM:206800,Orphanet:ORPHA79143,SNOMED CT:23610003 Anonychia germline 20 968000 TCCGCCAGTACGGCAAGTGCCTGCACGACTGTCCCCCTGGGTACTTCGGCATCCGCGGCCA 397515470 76956 NM_001101.4(ACTB):c.349G>A (p.Glu117Lys) ACTB Sep 17, 2015 MedGen:C1855722,OMIM:243310,OMIM:608578,Orphanet:ORPHA2995 Baraitser-Winter syndrome 1 germline 7 5529175 GAGGCCCCCCTGAACCCCAAGGCCAACCGCGAGAAGATGACCCAGGTGAGTGGCCCGCTAC 137852487 25083 NM_000194.2(HPRT1):c.209G>A (p.Gly70Glu) HPRT1 Sep 26, 2017 na;MedGen:C0023374,OMIM:300322,SNOMED CT:10406007 HPRT NEW HAVEN;Lesch-Nyhan syndrome germline X 134475255 ATCACATTGTAGCCCTCTGTGTGCTCAAGGGGGGCTATAAATTCTTTGCTGACCTGCTGGA 797045160 205613 NM_000492.3(CFTR):c.1117-1G>A CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline 7 117542015 ATAATATGTTTTTGCTCTCTTTTATAAATAGGATTTCTTACAAAAGCAAGAATATAAGACA 137852768 23784 NM_004168.3(SDHA):c.1664G>A (p.Gly555Glu) SDHA Apr 27, 2017 MedGen:C3150898,OMIM:613642;MedGen:C1855008,OMIM:252011,Orphanet:ORPHA3208 Dilated cardiomyopathy 1GG;Mitochondrial complex II deficiency not provided 5 251338 TGCCCCTGATGGAACTTTTTGTGTCCCCAGGAATGGTCTGGAACACGGACCTGGTGGAGAC 386833443 70600 NM_000100.3(CSTB):c.66G>A (p.Gln22=) CSTB Nov 25, 2014 MedGen:C0751785,OMIM:254800,Orphanet:ORPHA308,SNOMED CT:230423006 Unverricht-Lundborg syndrome germline 21 43776204 CACCGCCGAGACCCAGCACATCGCCGACCAGGTGGGTGGGCCGCGGGGACGGGGCCGGCCC 587776597 19529 NM_020451.2(SEPN1):c.1385G>A (p.Sec462=) SELENON Sep 01, 2001 MedGen:C0410180,OMIM:602771,SNOMED CT:240063002 Eichsfeld type congenital muscular dystrophy germline 1 25812790 TGTGGGGGGCCCTGGATGACCAGTCCTGCTGAGGTGAGGGGCCCGGCTGGATCTAAGGGGA 387907289 45792 NM_004984.3(KIF5A):c.704G>A (p.Gly235Glu) KIF5A Aug 01, 2012 MedGen:C1858712,OMIM:604187,Orphanet:ORPHA100991 Spastic paraplegia 10 germline 12 57567608 GTGGGAAGCTGTATCTGGTGGACCTGGCAGGGAGTGAGAAGGTAGGGGGTCCTGTGGATAT 121918571 28199 NM_000448.2(RAG1):c.983G>A (p.Cys328Tyr) RAG1 Dec 15, 2007 MedGen:C1801959,OMIM:603554,Orphanet:ORPHA39041,SNOMED CT:307650006 Histiocytic medullary reticulosis germline 11 36574287 TCAGATGCCTCAAAGTCATGGGCAGCTATTGTCCCTCTTGCCGATATCCATGCTTCCCTAC 886041130 265048 NM_000044.4(AR):c.1886-1G>A AR May 04, 2016 MedGen:CN517202 not provided germline X 67711401 ATAAATTCAAGTCTCTCTTCCTTCCCAATAGCCCGGAAGCTGAAGAAACTTGGTAATCTGA 387907042 39839 NM_014049.4(ACAD9):c.797G>A (p.Arg266Gln) ACAD9 Dec 01, 2010 MedGen:C1970173,OMIM:611126,Orphanet:ORPHA99901 Acyl-CoA dehydrogenase family, member 9, deficiency of germline 3 128899450 ATGGGAAACCCGAAGATAAATTAGGCATTCGGGGCTCCAACAGTAAGTAGCTCCTGTGCGC 886039548 260163 NM_000267.3(NF1):c.204+1G>A NF1 Sep 29, 2017 MedGen:CN517202 not provided germline 17 31156127 ACTACTATTTTAAAGAATGTTAACAATATGGTGAGTATTTGGGTTACTGTGTTTTGGGGAA 121909578 32645 NM_001738.4(CA1):c.740G>A (p.Arg247His) CA1 Jul 29, 1977 MedGen:C4015932 Carbonic anhydrase I deficiency germline 8 85328606 ATAACGCTGTCCCCATGCAGCACAACAACCGCCCAACCCAACCTCTGAAGGGCAGAACAGT 879255235 65652 NM_018684.3(ZC4H2):c.593G>A (p.Arg198Gln) ZC4H2 Jun 08, 2017 MedGen:C0796200,OMIM:314580,Orphanet:ORPHA3454;MedGen:CN517202 Wieacker syndrome;not provided germline X 64917865 CCTGCTTGTCATGTCACCAGCAAATTCACCGGAATGCACCTATATGCCCTCTTTGCAAGGC 587776943 48565 NM_001310338.1(MGME1):c.456G>A (p.Trp152Ter) MGME1 Feb 01, 2013 MedGen:C3554462,OMIM:615084,Orphanet:ORPHA352447 Mitochondrial DNA depletion syndrome 11 germline 20 17970315 AAAACAACAGGTTTTCTTGTTGGAGAGGTGGAAACAGCGGATGATTCTGGAACTGGGAGAA 371977235 437669 NM_000340.1(SLC2A2):c.963+1G>A SLC2A2 Sep 08, 2017 Human Phenotype Ontology:HP:0005978,MedGen:C0011860,OMIM:125853,Orphanet:ORPHA181376,SNOMED CT:44054006 Diabetes mellitus type 2 unknown 3 171005284 GTGGCTCAGCAATTTTCCGGAATCAATGGCGTAAGTTTAAGAACACCCACTAACTCTTAAG 515726205 136363 NM_001031726.3(C19orf12):c.205G>A (p.Gly69Arg) C19orf12 Mar 16, 2017 Human Phenotype Ontology:HP:0007830,MedGen:C4024790;Human Phenotype Ontology:HP:0001332,MedGen:C0013421;Human Phenotype Ontology:HP:0001268,MedGen:C0234985;MedGen:C3280371,OMIM:614298,Orphanet:ORPHA289560;Human Phenotype Ontology:HP:0007994,MedGen:C0241688;MedGen:C2680446,OMIM:615043,Orphanet:ORPHA320370;Human Phenotype Ontology:HP:0001337,MedGen:C0040822 Adult-onset night blindness;Dystonia;Mental deterioration;Neurodegeneration with brain iron accumulation 4;Peripheral visual field loss;Spastic paraplegia 43, autosomal recessive;Tremor germline;unknown 19 29702966 ACGATTCCATGTTTTCTAGGGGGGGCTGTCGGGGGGCTGTTAGGTGCCTGGATGACAAGTG 121908226 23539 NM_001127221.1(CACNA1A):c.5266G>A (p.Glu1756Lys) CACNA1A Dec 04, 2007 MedGen:C1720416,OMIM:108500,Orphanet:ORPHA97,SNOMED CT:420932006 Episodic ataxia type 2 germline 19 13231847 TTTCTCCCTGTCCTCAGGAGTGCCACCGGGGAAGCTTGGCACAACATCATGCTTTCCTGCC 587779554 107004 NM_000090.3(COL3A1):c.3220G>A (p.Gly1074Ser) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189006955 TTTTCATCTTAGGGCCCTGCTGGCCCTGCTGGTGCTCCCGGTCCTGCTGGTTCCCGAGGTG 77975504 20033 NM_021625.4(TRPV4):c.1781G>A (p.Arg594His) TRPV4 May 27, 2016 MedGen:C0027868,Orphanet:ORPHA68381;MedGen:C1868616,OMIM:168400,Orphanet:ORPHA2646;Human Phenotype Ontology:HP:0002652,MedGen:C0410528,SNOMED CT:105986008;MedGen:C0265280,OMIM:184252,Orphanet:ORPHA93314;MedGen:CN517202 Neuromuscular Diseases;Parastremmatic dwarfism;Skeletal dysplasia;Spondylometaphyseal dysplasia, Kozlowski type;not provided germline;unknown 12 109792695 TGGGCTGGATGAATGCCCTTTACTTCACCCGTGGGCTGAAGCTGACGGGGACCTATAGCAT 587780305 134113 NM_030928.3(CDT1):c.832+1G>A CDT1 Mar 28, 2013 MedGen:C3151120,OMIM:613804 Meier-Gorlin syndrome 4 germline 16 88805870 AGCTCACCATCGAGCCACTGCTGGAGCAGGGTGAGTGCTGGGTGCGGGACCTCGGTTTCCC 864321690 216946 NM_100264.2(WAC):c.1586G>A (p.Trp529Ter) WAC Nov 01, 2015 MedGen:C4225239,OMIM:616708 Desanto-shinawi syndrome germline 10 28616337 GTGAAAATCTCATAAAACACGTTCAAGGATGGCCTGCAGATCATGCAGAGAAGCAGGTATG 199474673 24595 m.5521G>A MT-TW Jun 01, 1998 Human Phenotype Ontology:HP:0003737,MedGen:C0162670,OMIM:251900,Orphanet:ORPHA206966 Mitochondrial myopathy germline MT 5521 CTTTTATACTAATAATCTTATAGAAATTTAGGTTAAATACAGACCAAGAGCCTTCAAAGCC 199476143 24587 m.1606G>A MT-TV Jun 01, 2002 MedGen:C4016634 Ataxia, progressive seizures, mental deterioration, and hearing loss germline MT 1606 GTACTGGAAAGTGCACTTGGACGAACCAGAGTGTAGCTTAACACAAAGCACCCAACTTACA 180177234 200509 NM_000030.2(AGXT):c.525-1G>A AGXT Nov 27, 2014 MedGen:C0268164,OMIM:259900,Orphanet:ORPHA93598,SNOMED CT:65520001 Primary hyperoxaluria, type I germline 2 240872978 CTGCCCTCCATTCTGTCCCCCACCTCTCCAGGTACAAGTGCCTGCTCCTGGTGGATTCGGT 771427957 191552 NM_005609.3(PYGM):c.1768+1G>A PYGM Nov 14, 2016 MedGen:C0017924,OMIM:232600,Orphanet:ORPHA368,SNOMED CT:55912009;MedGen:CN517202 Glycogen storage disease, type V;not provided germline 11 64751923 ACTGCCTCCATGTCATCACCCTGTACAACCGTGAGTGGCAGCCACTCTACCCTGTCTCTCA 267607025 20432 NM_015713.4(RRM2B):c.329G>A (p.Arg110His) RRM2B Apr 17, 2014 MedGen:C3150172;MedGen:CN187502 Mitochondrial DNA depletion syndrome 8B (MNGIE type);RRM2B-related mitochondrial disease germline 8 102225011 ATCTATTTTCCTTATCTTCTTAGGTGGAGCGCTTTAGTCAGGAGGTGCAGGTTCCAGAGGC 121908750 22222 NM_000492.3(CFTR):c.271G>A (p.Gly91Arg) CFTR Apr 01, 1993 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline 7 117509140 TTTATGTTCTATGGAATCTTTTTATATTTAGGGGTAAGGATCTCATTTGTACATTCATTAT 121918290 17784 NM_004183.3(BEST1):c.715G>A (p.Val239Met) BEST1 Oct 01, 2004 MedGen:C2674009,Orphanet:ORPHA263347 Microcornea, rod-cone dystrophy, cataract, and posterior staphyloma germline 11 61958146 TTTGCTACCACATCCTCCTCCTCCTCCCAGGTGGTGACTGTGGCGGTGTACAGCTTCTTCC 267606603 15395 NM_000267.3(NF1):c.1260+1G>A NF1 Apr 30, 2016 MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003 Neurofibromatosis, type 1 germline;unknown 17 31201486 GTAAATTCACTCCATCGAATCATCACCAATGTAAGTCCAAAAGGTATTGCTAAATTACTAA 372267274 181724 NM_001128425.1(MUTYH):c.389-1G>A MUTYH Aug 09, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1837991,OMIM:608456,Orphanet:ORPHA247798 Hereditary cancer-predisposing syndrome;MYH-associated polyposis germline 1 45333171 CAGTGTCCTCATGCCAACCCCTTTCCCCCAGTGTGGGTCTCAGAGGTCATGCTGCAGCAGA 267607114 16413 NM_001142301.1(TMEM67):c.1391G>A (p.Gly464Glu) TMEM67 Jan 01, 2007 MedGen:C1853153,OMIM:610688 Joubert syndrome 6 germline 8 93793256 CTGTTTTAGCATCTCTTTTGAAGACAGCAGGATGGAAGAGGCGCATTGGGAGTCCCATGAT 1057520671 368396 NM_022455.4(NSD1):c.4765+1G>A NSD1 Apr 30, 2015 MedGen:CN517202 not provided germline 5 177251854 GAAAATTTATCTGCAATGAATGTCGCACAGGTAAAGTAGATATCGAACGGTCTTCCTCCAA 128620183 26381 NM_000061.2(BTK):c.1574G>A (p.Arg525Gln) BTK Feb 17, 2017 MedGen:C1832241,OMIM:601495,Orphanet:ORPHA33110;MedGen:C0221026,OMIM:300755,Orphanet:ORPHA47,SNOMED CT:65880007 Agammaglobulinemia, non-Bruton type;X-linked agammaglobulinemia germline X 101354687 ACTGGTCTCTGTTTGCACTACAGGCAGCTCGAAACTGTTTGGTAAACGATCAAGGAGTTGT 1064792872 224771 NM_001257988.1(TYMP):c.893G>A (p.Gly298Asp) TYMP Jan 14, 2016 MedGen:C0872218,OMIM:603041,Orphanet:ORPHA298 Mitochondrial DNA depletion syndrome 1 (MNGIE type) germline 22 50526611 AGGAGGCGCTGCTCTGCATGGACGGCGCAGGCCCGCCAGACTTAAGGGACCTGGTCACCAC 72556302 103153 NM_000531.5(OTC):c.590G>A (p.Gly197Glu) OTC - MedGen:CN517202 not provided unknown X 38403667 AAGGTCTTACCCTCAGCTGGATCGGGGATGGGAACAATATCCTGCACTCCATCATGATGAG 587776838 31416 NM_021870.2(FGG):c.307+5G>A FGG Oct 01, 2000 MedGen:C2584774,OMIM:202400,Orphanet:ORPHA98880 Afibrinogenemia, congenital germline 4 154612013 TAATCCTGATGAATCATCAAAACCAAGTGAGAAAATAAAGACTACTGACCAAAAAATAATA 386833440 70597 NM_000100.3(CSTB):c.168G>A (p.Lys56=) CSTB Nov 25, 2014 MedGen:C0751785,OMIM:254800,Orphanet:ORPHA308,SNOMED CT:230423006 Unverricht-Lundborg syndrome germline 21 43774658 GGTGGTCGCGGGGACAAACTACTTCATCAAGGTAGAGTGTGGGCCTCAGGAGGGCCTGCCC 121918641 27895 NM_003126.3(SPTA1):c.83G>A (p.Arg28His) SPTA1 May 03, 2017 MedGen:C1851741,OMIM:130600;Human Phenotype Ontology:HP:0004839,MedGen:C0520739,OMIM:266140,SNOMED CT:9434008;MedGen:CN517202;MedGen:CN169374 Elliptocytosis 2;Hereditary pyropoikilocytosis;not provided;not specified germline 1 158685289 TGGAAACAGCAGAAGAGATCCAGGAGAGGCGTCAGGAAGTGTTGACTCGGTATCAAAGTTT -1 441151 NM_194456.1(KRIT1):c.486-1G>A KRIT1 Oct 17, 2016 MedGen:CN517202 not provided germline 7 92235647 GCTACTTCTACCTGTTTTTTTATTTTGCCAGGTGGTTAGATGAACGTCATGCACAATCTCA 753887925 16951 NM_000411.7(HLCS):c.1519+5G>A HLCS Nov 01, 2001 MedGen:C0268581,OMIM:253270,Orphanet:ORPHA79242 Holocarboxylase synthetase deficiency germline 21 36767213 CGCGGCCCGGCAGACCGAGGGCAAAGGTCAGTCATCTTTTGTGATCATTGCTGTTACTTCT 121918513 28285 NM_002739.4(PRKCG):c.383G>A (p.Gly128Asp) PRKCG Apr 18, 2013 MedGen:C1854369,OMIM:605361,Orphanet:ORPHA98763 Spinocerebellar ataxia 14 germline 19 53889735 GCTCCCTCCTCTACGGGCTTGTGCACCAGGGCATGAAATGCTCCTGTGAGTGACCTGGGCC 104893877 29046 NM_000345.3(SNCA):c.157G>A (p.Ala53Thr) SNCA Mar 10, 2017 MedGen:C0752347,OMIM:127750;MedGen:C1868595,OMIM:168601;MedGen:C1868595,OMIM:168601 Lewy body dementia;Parkinson disease 1;Parkinson disease 1 germline 4 89828149 AAAACCAAGGAGGGAGTGGTGCATGGTGTGGCAACAGGTAAGCTCCATTGTGCTTATATCC 875989926 228179 NM_000527.4(LDLR):c.1705+1G>A LDLR Mar 25, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline;not applicable 19 11116213 ACATTCAGTGGCCCAATGGCATCACCCTAGGTATGTTCGCAGGACAGCCGTCCCAGCCAGG 730882070 40143 NM_005786.5(TSHZ1):c.723G>A (p.Trp241Ter) TSHZ1 Mar 01, 2014 MedGen:C1842937,OMIM:607842 Aural atresia, congenital germline 18 75286265 GGACAAGGACTCCGAGAAGACCAAGAGGTGGTCCAAGCCCAGGAAGCGCTCCCTGATGGAG 121912748 32806 NM_000342.3(SLC4A1):c.2102G>A (p.Gly701Asp) SLC4A1 Jan 01, 2003 MedGen:C1969038,OMIM:611590,Orphanet:ORPHA93610 Renal tubular acidosis, distal, with hemolytic anemia germline 17 44253327 AACCTGAGCGCAAGATGGTCAAGGGCTCCGGCTTCCACCTGGACCTGCTGCTGGTAGTAGG 111033574 19658 NM_021830.4(TWNK):c.1422G>A (p.Trp474Ter) TWNK Jul 01, 2001 MedGen:C1836439,OMIM:609286 Autosomal dominant progressive external ophthalmoplegia with mitochondrial DNA deletions 3 germline 10 100989822 GGAAGATCAACTGGACAAATATGATCACTGGGCTGACCGCTTTGAGGACCTGCCCCTCTAT 386134135 51334 NM_000096.3(CP):c.395-1G>A CP Apr 18, 2013 MedGen:C0878682,OMIM:604290,Orphanet:ORPHA48818,SNOMED CT:124224004 Deficiency of ferroxidase not provided 3 149210380 CTTTGCACCTTCATTGCATGTTGCTTCCTAGGGGCCATCTACCCTGATAACACCACAGATT 137853205 33306 NM_000476.2(AK1):c.190G>A (p.Gly64Arg) AK1 Jul 01, 2003 MedGen:C2675459,OMIM:612631,Orphanet:ORPHA86817 Adenylate kinase deficiency, hemolytic anemia due to germline 9 127872707 GGCAAGAAGCTGTCGGAAATCATGGAGAAGGGGCAGCTGGTTCCACTGGTGAGTGGGCCCT 267606924 15219 NM_000274.3(OAT):c.824G>A (p.Trp275Ter) OAT Jan 29, 1993 Human Phenotype Ontology:HP:0012026,MedGen:C0599035,OMIM:258870,SNOMED CT:276426004 Ornithine aminotransferase deficiency germline 10 124403003 TACAGACAGGATTGGCCAGAACTGGTAGATGGCTGGCTGTTGATTATGAAAATGTCAGACC 104886185 35871 NM_000495.4(COL4A5):c.2509G>A COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108615024 CCAGGGATTCCTGGGCCAATAGGTCAACCTGGTAAGATTAGAGTAAATGTGCATTTTGTAG 797044488 172117 NM_170707.3(LMNA):c.1968+5G>A LMNA Aug 01, 2015 MedGen:C4016241;MedGen:C0033300,OMIM:176670,Orphanet:ORPHA740,SNOMED CT:238870004 Hutchinson-Gilford progeria syndrome, atypical;Hutchinson-Gilford syndrome germline 1 156138762 TGGGCAACTCCAGCCCCCGAACCCAGGTGAGTTGTCTCTGCTTTGTCTCCAAATCCTGCAG 104886365 35596 NM_000495.4(COL4A5):c.276+5G>A COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108563931 GGCCACCAGGACCAAAAGGAATCAGAGTAAGTAGTATTTTCTCTATATCAAATACTTTGTT 121918377 28236 NM_006907.3(PYCR1):c.356G>A (p.Arg119His) PYCR1 Sep 01, 2009 MedGen:C2751987,OMIM:612940,Orphanet:ORPHA357064 Autosomal recessive cutis laxa type 2B germline 17 81935110 CAGCGTTTCGGCCAGCCCCCAGGGTCATCCGCTGCATGACCAACACTCCAGTCGTGGTGCG 28937588 21280 NM_004700.3(KCNQ4):c.853G>A (p.Gly285Ser) KCNQ4 Aug 20, 2015 MedGen:C2677637,OMIM:600101;MedGen:CN043648,Orphanet:ORPHA87884 DFNA 2 Nonsyndromic Hearing Loss;Nonsyndromic hearing loss and deafness germline 1 40819893 TTGTGTCTCCAGATTACATTGACAACCATCGGCTATGGTGACAAGACACCGCACACATGGC 66664580 468237 NM_000088.3(COL1A1):c.1012G>A (p.Gly338Ser) COL1A1 May 17, 2017 MedGen:C0023931,OMIM:166200,SNOMED CT:385482004 Osteogenesis imperfecta type I germline 17 50195967 ACATCTCCATTTCATTCACAGGGTCCCACCGGCCCCGCTGGTCCTCCTGGCTTCCCTGGTG 374928784 101830 NM_019109.4(ALG1):c.1187+1G>A ALG1 Apr 20, 2016 MedGen:CN517202 not provided germline 16 5082674 TTTGCCTGTGTGTGCTGTGAACTTCAAGTGGTAGGAGCAGAACCCAAATCCTTCTGGGGAT 797045207 207848 NM_000352.4(ABCC8):c.2117-1G>A ABCC8 Jul 29, 2015 MedGen:C1257959,OMIM:256450,SNOMED CT:360339005 Persistent hyperinsulinemic hypoglycemia of infancy germline 11 17427155 CACTCACATCTGCCACCCTCCCTCCCTGCAGGCCAGCTGACTATGATCGTGGGGCAGGTGG 864622520 222372 NM_015915.4(ATL1):c.757G>A (p.Val253Ile) ATL1 Aug 24, 2016 MedGen:C2931355,OMIM:182600,Orphanet:ORPHA100984;MedGen:CN517202 Spastic paraplegia 3;not provided germline 14 50614406 TCAGGGAACCAGCATGAAGAACTACAGAACGTCAGAAAACACATCCATTCCTGTTTCACCA 142422525 181591 NM_006702.4(PNPLA6):c.3382G>A (p.Gly1128Ser) PNPLA6 Mar 19, 2015 MedGen:C1848745,OMIM:275400 Trichomegaly with mental retardation, dwarfism and pigmentary degeneration of retina germline 19 7558948 GACCTCAGCACCTACGGGGACAGCCTGTCCGGCTGGTGGCTGCTGTGGAAGCGGCTGAATC 387907348 51196 NM_001130004.1(ACTN1):c.137G>A (p.Arg46Gln) ACTN1 Mar 07, 2013 MedGen:C3554663,OMIM:615193 Platelet-type bleeding disorder 15 germline 14 68925641 CATTCACGGCATGGTGTAACTCCCACCTCCGGAAGGCGGGGACACAGATCGAGAACATCGA 34139950 434365 NM_015991.3(C1QA):c.648G>A (p.Trp216Ter) C1QA Sep 28, 2017 MedGen:C3150902,OMIM:613652 C1q deficiency germline 1 22639317 GCTTCAGCTGCAGCAGGGTGACCAGGTCTGGGTTGAAAAAGACCCCAAAAAGGGTCACATT 104886381 35989 NM_000495.4(COL4A5):c.3554-1G>A COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108667132 TTTTGTTTTGTTTTGTTTTGTACTCTGACAGGTCAACCAGGCTTTGGAAACCCAGGACCCC 80358702 66379 NM_000059.3(BRCA2):c.475G>A (p.Val159Met) BRCA2 Jul 17, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 2;Hereditary cancer-predisposing syndrome;not provided germline 13 32326150 ACACATGTAACACCACAAAGAGATAAGTCAGGTATGATTAAAAACAATGCTTTTTATTCTT 796051895 199925 NM_145207.2(SPATA5):c.298G>A (p.Ala100Thr) SPATA5 Sep 03, 2015 MedGen:C4225276,OMIM:616577,Orphanet:ORPHA457351 Epilepsy, hearing loss, and mental retardation syndrome germline 4 122929049 TTTATTTCCTCTGTCTGGCAGGTGTATACAGCCTGGCCTATGGCAGGATTTCCTGGAGGCA 121912298 47535 NM_001363.4(DKC1):c.1050G>A (p.Met350Ile) DKC1 May 10, 2012 MedGen:C1148551,OMIM:305000 Dyskeratosis congenita X-linked germline X 154773144 TTATTCAATGCCTGTAGCTATTGCATTAATGACCACAGCGGTCATCTCTACCTGCGACCAT 1057517662 359045 NM_001309443.1(SPARC):c.494G>A (p.Arg165His) SPARC Aug 05, 2015 MedGen:C4225301,OMIM:616507 Osteogenesis imperfecta, type xvii germline 5 151667555 TGGACTCTGAGCTGACCGAATTCCCCCTGCGCATGCGGGACTGGCTCAAGAACGTCCTGGT 104886144 35798 NM_000495.4(COL4A5):c.1886G>A (p.Gly629Asp) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108598808 CTATGGGTCCCCCTGGTTTCGGCCCTCCAGGCCCAGTAGGTGAAAAAGGCATACAAGGTGT 121917832 23862 NM_004064.4(CDKN1B):c.227G>A (p.Trp76Ter) CDKN1B Nov 01, 2010 MedGen:C1970712,OMIM:610755,Orphanet:ORPHA276152 Multiple endocrine neoplasia, type 4 germline 12 12718066 ATCACAAACCCCTAGAGGGCAAGTACGAGTGGCAAGAGGTGGAGAAGGGCAGCTTGCCCGA 104893743 18569 NM_153281.1(HYAL1):c.802G>A (p.Glu268Lys) HYAL1 May 25, 1999 MedGen:C1291490,OMIM:601492,Orphanet:ORPHA67041,SNOMED CT:124473006 Deficiency of hyaluronoglucosaminidase germline 3 50302155 TCACAGATGTATGTGCAACACCGTGTGGCCGAGGCATTCCGTGTGGCTGTGGCTGCTGGTG 138025751 200476 NM_000030.2(AGXT):c.353G>A (p.Arg118His) AGXT Nov 27, 2014 MedGen:C0268164,OMIM:259900,Orphanet:ORPHA93598,SNOMED CT:65520001 Primary hyperoxaluria, type I germline 2 240869357 GGGGGCAGCGAGCCGTGGACATCGGGGAGCGCATAGGTAAGGGAGAGGCCCAGGTGGGGAT 202247805 46960 NM_014252.3(SLC25A15):c.658G>A (p.Gly220Arg) SLC25A15 May 31, 2012 MedGen:C0268540,OMIM:238970,Orphanet:ORPHA415,SNOMED CT:30287008 Hyperornithinemia-hyperammonemia-homocitrullinuria syndrome not provided 13 40808473 GTACCTTTGATGTTAAGTGGTGGAGTTGGTGGGATTTGCCTCTGGCTTGCGGTATACCCAG 886041609 264242 NM_015570.3(AUTS2):c.1974G>A (p.Trp658Ter) AUTS2 Feb 26, 2016 MedGen:CN517202 not provided germline 7 70777144 GTGGTGTGCTATGCATGTTCACATCGCCTGGCAGATTTACCACCACCAACAGAAAGTCAAG 387906485 25972 NM_000397.3(CYBB):c.252G>A (p.Ala84=) CYBB Mar 23, 2017 MedGen:C1844376,OMIM:306400;MedGen:CN517202 Chronic granulomatous disease, X-linked;not provided germline X 37783600 TCTGCTGTCCTTCCTCAGGGGTTCCAGTGCGGTAAGAGAAAATGTTTTACTAAGTTCCTCT 137852801 33418 NM_000079.3(CHRNA1):c.517G>A (p.Gly173Ser) CHRNA1 Jul 25, 2017 MedGen:C1854678,OMIM:253290,Orphanet:ORPHA33108,SNOMED CT:60192008;MedGen:C0751885,OMIM:601462 Lethal multiple pterygium syndrome;Myasthenic syndrome, slow-channel congenital germline 2 174754242 AGCATGAAGCTGGGCACCTGGACCTACGACGGCTCTGTCGTGGCCATCAACCCGGTAGGTG 121912938 32219 NM_001848.2(COL6A1):c.850G>A (p.Gly284Arg) COL6A1 Sep 13, 2017 MedGen:CN029274,OMIM:158810;MedGen:CN033863,OMIM:254090;MedGen:C4015958;MedGen:CN517202 Bethlem myopathy 1;Ullrich congenital muscular dystrophy 1;Ullrich congenital muscular dystrophy 1, autosomal dominant;not provided germline 21 45989129 CCGGGGCTCCCAGGAGAGAAGGGAGAAGCCGGAGATCCTGTGAGTGCCTGACTGTGGGGTG 727503120 176320 NM_002294.2(LAMP2):c.183+1G>A LAMP2 Nov 12, 2016 MedGen:C0878677,OMIM:300257,Orphanet:ORPHA34587,SNOMED CT:419097006 Danon disease germline X 120456650 GTACGCTATGAAACTACAAATAAAACTTATGTAAGTATATATTTTAATTTTTCTTTGAGTT 754558574 445946 NM_000227.4(LAMA3):c.3881+1G>A LAMA3 Nov 23, 2015 MedGen:CN517202 not provided germline 18 23932292 GGGTTGTATTAGCAATGTTTTTGTCCAGAGGTAGGTGATCCTCTCTTTGTGGGTAACTGAT 745891180 21711 NM_003494.3(DYSF):c.5057+5G>A DYSF Apr 10, 2000 MedGen:C1850889,OMIM:253601,Orphanet:ORPHA268 Limb-girdle muscular dystrophy, type 2B germline 2 71664443 TGTGGACTCCCACAGACCTACTGTGTGTACGTGGATGGGGGCTGGCTGCCTGCTTCTCTGA 762765702 414714 NM_177973.1(SULT2B1):c.821G>A (p.Arg274Gln) SULT2B1 Jul 13, 2017 MedGen:C1855792,OMIM:242100;MedGen:CN317536,OMIM:617571 Autosomal recessive congenital ichthyosis 2;ICHTHYOSIS, CONGENITAL, AUTOSOMAL RECESSIVE 14 germline 19 48596914 TGCTGGACCACCGTCGCGGGGCCTTCCTCCGGAAAGGTGCGGGGGTTCTGGGGTTCAGAGC 1131691149 421089 NM_000051.3(ATM):c.8879G>A (p.Trp2960Ter) ATM Oct 05, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0027672,SNOMED CT:699346009 Ataxia-telangiectasia syndrome;Hereditary cancer-predisposing syndrome germline 11 108365110 AGGTCCTTCTATATGATCCACTCTTTGACTGGACCATGAATCCTTTGAAAGCTTTGTATTT 146600671 36419 NM_000060.4(BTD):c.1369G>A (p.Val457Met) BTD Dec 04, 2012 MedGen:C0220754,OMIM:253260,Orphanet:ORPHA79241,SNOMED CT:8808004 Biotinidase deficiency not provided 3 15645225 CACACAGTACATGGCACTTACTACATCCAAGTGTGTGCCCTGGTCAGGTGTGGGGGTCTTG 267606970 18270 NM_013382.5(POMT2):c.1057G>A (p.Gly353Ser) POMT2 May 26, 2009 MedGen:C3150411,OMIM:613150;MedGen:C3150416,OMIM:613156 Congenital muscular dystrophy-dystroglycanopathy with brain and eye anomalies, type A2;Congenital muscular dystrophy-dystroglycanopathy with mental retardation, type B2 germline 14 77296223 ATCACTGTGAAGAACCTCCGGATGGCCATCGGCTATCTGCACTCCCACAGGCACCTCTACC 786201037 181592 NM_006702.4(PNPLA6):c.3152G>A (p.Arg1051Gln) PNPLA6 Mar 19, 2015 MedGen:C1848745,OMIM:275400 Trichomegaly with mental retardation, dwarfism and pigmentary degeneration of retina germline 19 7556710 TGACCACAGATATCACCGCCTCAGCCATGCGAGTCCACAAAGATGGTGGGTGTCCCCGCCC 80358312 21328 NM_002335.3(LRP5):c.1709G>A (p.Arg570Gln) LRP5 Nov 01, 2004 MedGen:C4016839 Exudative vitreoretinopathy 4, autosomal recessive germline 11 68403607 GGACTGACTGGCAGCGCCGCAGCATCGAGCGGGTGCACAAGGTCAAGGCCAGCCGGGACGT 104894720 27568 NM_000660.6(TGFB1):c.653G>A (p.Arg218His) TGFB1 Mar 05, 2015 Human Phenotype Ontology:HP:0100252,MedGen:C0011989,OMIM:131300,SNOMED CT:34643004 Diaphyseal dysplasia germline 19 41342229 CCACTCCTACAGGGGAAATTGAGGGCTTTCGCCTTAGCGCCCACTGCTCCTGTGACAGCAG 397508122 67752 NM_000218.2(KCNQ1):c.683+5G>A KCNQ1 Jun 11, 2015 MedGen:CN517202 not provided germline 11 2571408 CAGGTGTTTGCCACGTCGGCCATCAGGTGCGTCTGTGCCACAAGCTCCCCCCGCCATGCCG 730881581 180665 NM_000059.3(BRCA2):c.8174G>A (p.Trp2725Ter) BRCA2 Nov 14, 2016 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145;MedGen:CN517202 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome;not provided germline 13 32363376 AAGTGGCCATTATTGAACTTACAGATGGGTGGTATGCTGTTAAGGCCCAGTTAGATCCTCC 121909835 38829 NM_000440.2(PDE6A):c.2053G>A (p.Val685Met) PDE6A Nov 01, 2010 MedGen:C3151139,OMIM:613810 Retinitis pigmentosa 43 germline 5 149883511 TGTAGGAAGAGGACGATGTTCCAAAAGATCGTGGATCAGTCTAAGACATATGAGAGTGAAC 121909302 23206 NM_000436.3(OXCT1):c.656G>A (p.Gly219Glu) OXCT1 Sep 01, 2000 MedGen:C0342792,OMIM:245050,Orphanet:ORPHA832,SNOMED CT:238004006 Succinyl-CoA acetoacetate transferase deficiency germline 5 41842690 TGGTGAAAGCCTGGAAGGCGGACCGAGCAGGAAACGTGATTTTCAGGTATTGTGATAGTTT 78973108 19367 NM_000157.3(GBA):c.887G>A (p.Arg296Gln) GBA May 06, 2016 MedGen:C0017205,Orphanet:ORPHA355;MedGen:C1842704,OMIM:608013,Orphanet:ORPHA85212;MedGen:C1961835,OMIM:230800,SNOMED CT:62201009;MedGen:CN517202 Gaucher disease;Gaucher disease, perinatal lethal;Gaucher's disease, type 1;not provided germline 1 155237453 AGTGCCTGGGCTTCACCCCTGAACATCAGCGAGACTTCATTGCCCGTGACCTAGGTCCTAC 794728208 197723 NM_000138.4(FBN1):c.3712G>A (p.Asp1238Asn) FBN1 May 14, 2015 MedGen:CN517202 not provided germline 15 48485374 GCACTAATGCCTGACCAGAGATCATGCACCGGTGAGTAGGTTCTAGCCTCATGTTGAATCT 111033806 36651 NM_000155.3(GALT):c.1018G>A (p.Glu340Lys) GALT Dec 04, 2012 MedGen:C0268151,OMIM:230400,Orphanet:ORPHA79239,SNOMED CT:124354006 Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase not provided 9 34649523 GCCACTGTCCGGAAATTCATGGTTGGCTACGAAATGCTTGCTCAGGCTCAGAGGGACCTCA 120074181 18154 NM_000218.2(KCNQ1):c.916G>A (p.Gly306Arg) KCNQ1 Apr 28, 2017 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MedGen:C0035828,OMIM:192500,Orphanet:ORPHA101016,SNOMED CT:20852007;MedGen:CN517202 Congenital long QT syndrome;Long QT syndrome 1;not provided germline 11 2572981 TTCGGCAGCTACGCAGATGCGCTGTGGTGGGGGGTGGTAAGTCGGAAACTTCCAGGCATGG 863225321 214694 NM_000038.5(APC):c.1959-1G>A APC Apr 03, 2017 MedGen:C2713442,OMIM:175100;MedGen:CN517202 Familial adenomatous polyposis 1;not provided germline;unknown 5 112837552 TTAATTTTGTGATCTCTTGATTTTATTTCAGGCAAATCCTAAGAGAGAACAACTGTCTACA 786201028 181569 NM_000086.2(CLN3):c.494G>A (p.Gly165Glu) CLN3 Jun 10, 2014 MedGen:C4017059 Ceroid lipofuscinosis, neuronal, 3, protracted germline 16 28486617 TGGTCTTCGCTAGCATCTCATCAGGCCTTGGGGAGGTCACCTTCCTCTCCCTCACTGCCTT 745858366 199923 NM_145207.2(SPATA5):c.251G>A (p.Arg84Gln) SPATA5 Apr 03, 2017 MedGen:CN517202 not provided germline 4 122927721 CTATGAAGTCTGCAAATATATGTATAGGTCGACCAGTGTTGCTTACTAGTTTGAACGGAAA 374317179 101483 NM_014384.2(ACAD8):c.384G>A (p.Met128Ile) ACAD8 Mar 07, 2017 MedGen:C1969809,OMIM:611283,Orphanet:ORPHA79159,SNOMED CT:445274004;MedGen:CN517202 Deficiency of isobutyryl-CoA dehydrogenase;not provided germline 11 134258518 GTCTTTTCTTCTTGGTGTACCTATCAGCATGTGTGCCTGGATGATTGATAGCTTCGGAAAT 151344518 46953 NM_006796.2(AFG3L2):c.2012G>A (p.Gly671Glu) AFG3L2 May 17, 2011 MedGen:C1853249,OMIM:610246,Orphanet:ORPHA101109 Spinocerebellar ataxia 28 not provided 18 12337504 TTGTTCAGTTTGGCATGAATGAAAAGGTTGGGCAAATCTCCTTTGACCTCCCACGTCAGGG 200972872 425565 NM_000094.3(COL7A1):c.5820G>A (p.Pro1940=) COL7A1 Jun 09, 2017 MedGen:CN517202 not provided germline 3 48576249 TGGCCTGCGAGGAGAGCCTGGAAGTGTGCCGGTGAGCCAGGCTTGGGATGTCCCCTTGACT 794729296 198922 NM_001256850.1(TTN):c.79974G>A (p.Trp26658Ter) TTN Apr 01, 2014 MedGen:CN517202 not provided germline 2 178561235 TGAACGCAGAGAACTACCAGATGGCCGGTGGCTGAAGTGCAATTATACTAATATACAAGAA -1 488090 NM_174889.4(NDUFAF2):c.9G>A (p.Trp3Ter) NDUFAF2 Mar 16, 2018 MedGen:C1838979,OMIM:252010 Mitochondrial complex I deficiency germline 5 60945264 CGCTGGAAACTGGGTGGACGGCATGGGTTGGTCTCAGGATTTGTTCCGCGCCTTGTGGAGA 199476105 24728 m.14459G>A MT-ND6 Mar 19, 2015 MedGen:C1839040,OMIM:500001;Human Phenotype Ontology:HP:0001112,MedGen:C0917796,OMIM:535000,Orphanet:ORPHA104,SNOMED CT:58610003;MedGen:C0023264,OMIM:256000,Orphanet:ORPHA506,SNOMED CT:29570005;MedGen:C1838951 Leber hereditary optic neuropathy with dystonia;Leber's optic atrophy;Leigh syndrome;Leigh syndrome due to mitochondrial complex I deficiency germline MT 14459 CATGCCTCAGGATACTCCTCAATAGCCATCGCTGTAGTATATCCAAAGACAACCATCATTC 1057516150 354143 NM_023067.3(FOXL2):c.293G>A (p.Trp98Ter) FOXL2 Nov 03, 2016 MedGen:C0220663,OMIM:110100,Orphanet:ORPHA126 Blepharophimosis, ptosis, and epicanthus inversus germline 3 138946430 TCCCGTTCTACGAGAAGAATAAGAAGGGCTGGCAAAATAGCATCCGCCACAACCTCAGCCT -1 431491 NM_001014797.2(KCNMA1):c.2662G>A (p.Glu888Lys) KCNMA1 Aug 30, 2017 MedGen:C1836173,OMIM:609446,Orphanet:ORPHA79137 Generalized epilepsy and paroxysmal dyskinesia germline 10 76944851 AATATTGATGATACTTCGCTGCAGGACAAGGAATGCATCTTGGCGTCACTCAACATCAAAT -1 442815 NM_001029882.3(AHDC1):c.2327G>A (p.Trp776Ter) AHDC1 Sep 22, 2017 MedGen:CN517202 not provided germline 1 27549789 CTGAGTGGGCCGGGGATAAGGGTGGTGGCTGGGCCCCTCACCATGGGCACCCAGGCGGACA 869312918 226868 NM_018122.4(DARS2):c.127+1G>A DARS2 Nov 12, 2013 MeSH:D030342,MedGen:C0950123 Inborn genetic diseases germline 1 173825357 TGTTGCAGAGTTCACAGAGGAGAATTCCAGGTGAAAATAGCGAAGAGATCTATCCTATGAA 750014782 215641 NM_001320327.1(CHCHD2):c.300+5G>A CHCHD2 Jul 01, 2015 MedGen:C4225238,OMIM:616710 Parkinson disease 22, autosomal dominant germline 7 56104221 CTGCGAGGCCTGACATCACTTACCAGGTGGGAATTTAGGCAGCATTTCCCTTCCATGGGTG -1 442685 NM_018136.4(ASPM):c.8987+1G>A ASPM Aug 11, 2016 MedGen:CN517202 not provided germline 1 197095997 TTGCTTCTATACCAAACTAGAGAGAACACGGTAATGTATCATAGTTCTGTGGAGAGTGTAA 281864975 47632 NM_024312.4(GNPTAB):c.1325G>A (p.Cys442Tyr) GNPTAB May 10, 2012 MedGen:C0033788,OMIM:252600,Orphanet:ORPHA423461,SNOMED CT:65764006 Pseudo-Hurler polydystrophy not provided 12 101768120 CATGGCCTGTGCCAAACTGTGCCGAGGGCTGCCCAGGTTCCTGGATTAAGGATGGCTATTG 869312700 225868 NM_005249.4(FOXG1):c.821G>A (p.Arg274Gln) FOXG1 Jan 14, 2016 MedGen:C3150705,OMIM:613454 Rett syndrome, congenital variant de novo 14 28768100 TGTTCATCGGCGGCACCACGGGCAAGCTGCGGCGCCGCTCCACCACCTCGCGGGCCAAGCT 199472855 78356 NM_000238.3(KCNH2):c.299G>A (p.Arg100Gln) KCNH2 Apr 29, 2014 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MedGen:CN517202 Congenital long QT syndrome;not provided germline 7 150974719 AGGAGCGCAAAGTGGAAATCGCCTTCTACCGGAAAGATGGTAGGAGCGGGCCGGGGCGGGG 104893722 20966 NM_006580.3(CLDN16):c.571G>A (p.Gly191Arg) CLDN16 Jul 02, 1999 MedGen:C0268448,OMIM:248250,Orphanet:ORPHA31043,SNOMED CT:80710001 Primary hypomagnesemia germline 3 190404905 TACATTAAAGTCCGCATCTGCTTTGTTGCTGGAGCCACGTTACTAATAGCAGGTACCGGTC 121912664 27418 NM_000546.5(TP53):c.1010G>A (p.Arg337His) TP53 Jul 31, 2017 MedGen:C1859973;MedGen:C0027672,SNOMED CT:699346009;MedGen:C0085390,Orphanet:ORPHA524,SNOMED CT:428850001;Gene:553989,MedGen:C1835398,OMIM:151623;Human Phenotype Ontology:HP:0100013,MeSH:D001943,MedGen:C1458155,Orphanet:ORPHA180250,SNOMED CT:126926005;MedGen:CN517202 Adrenocortical carcinoma, pediatric;Hereditary cancer-predisposing syndrome;Li-Fraumeni syndrome;Li-Fraumeni syndrome 1;Neoplasm of the breast;not provided germline;unknown 17 7670699 CTCTGTTGCTGCAGATCCGTGGGCGTGAGCGCTTCGAGATGTTCCGAGAGCTGAATGAGGC 121909044 22264 NM_000492.3(CFTR):c.1658G>A (p.Arg553Gln) CFTR Feb 13, 1997 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline 7 117587812 AAGGTGGAATCACACTGAGTGGAGGTCAACGAGCAAGAATTTCTTTAGCAAGGTGAATAAC 1085307655 415797 NM_004187.3(KDM5C):c.2319G>A (p.Trp773Ter) KDM5C Apr 13, 2017 MedGen:CN517202 not provided germline X 53198813 GAAGGTTCGGGCTGAGTCCTTTGACACCTGGGCCAACAAAGTGCGAGTGGCCCTGGAGGTG 879254113 244944 NM_024675.3(PALB2):c.3491G>A (p.Trp1164Ter) PALB2 Sep 25, 2017 MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Familial cancer of breast;Hereditary cancer-predisposing syndrome;not provided germline 16 23603529 TCTCTGACCAACATTGGTCTTTTGTGAAATGGTCGGGTACAGACTCTCATTTGCTGGCTGG 17215479 67749 NM_000218.2(KCNQ1):c.643G>A (p.Val215Met) KCNQ1 Jun 12, 2015 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MedGen:CN517202 Congenital long QT syndrome;not provided germline 11 2571363 GTGGTCGTGGCCTCCATGGTGGTCCTCTGCGTGGGCTCCAAGGGGCAGGTGTTTGCCACGT 128621209 26427 NM_000061.2(BTK):c.1838G>A (p.Gly613Asp) BTK Oct 01, 1994 MedGen:C0221026,OMIM:300755,Orphanet:ORPHA47,SNOMED CT:65880007 X-linked agammaglobulinemia germline X 101353264 ACAGTGAGACTGCTGAACACATTGCCCAAGGCCTACGTCTCTACAGGCCTCATCTGGCTTC 397507303 46378 NM_000059.3(BRCA2):c.316+1G>A BRCA2 Oct 02, 2015 MedGen:C2675520,OMIM:612555 Breast-ovarian cancer, familial 2 germline 13 32319326 AAGAATTAGATAAATTCAAATTAGACTTAGGTAAGTAATGCAATATGGTAGACTGGGGAGA 868002181 440682 NM_000091.4(COL4A3):c.2452G>A (p.Gly818Arg) COL4A3 Mar 25, 2016 MedGen:CN517202 not provided germline 2 227280970 AGGTGCATAGAGGGTCCCAGGGGAGCCCAAGGACTTCCAGGCTTAAATGGATTGAAAGGGC -1 446650 NM_001039590.2(USP9X):c.1374G>A (p.Trp458Ter) USP9X Oct 19, 2017 MedGen:CN517202 not provided germline X 41144581 TGTACATGATCTCCTGGCAAAATTGGCATGGGATTTTTCTCCTGAACAACTTGATCATCTT 786205084 33482 NM_003494.3(DYSF):c.5429G>A (p.Arg1810Lys) DYSF Aug 09, 2016 MedGen:C1850889,OMIM:253601,Orphanet:ORPHA268;MedGen:C1850808,OMIM:254130,Orphanet:ORPHA45448 Limb-girdle muscular dystrophy, type 2B;Miyoshi muscular dystrophy 1 germline 2 71668842 CCTTCAACATCACCCCACGGAGAGCCAGAAGGTGACTTGCCCAGCCACAGGCTCTGAGCTG 797045359 209255 NM_000052.6(ATP7A):c.2499-1G>A ATP7A Feb 08, 2013 MedGen:C0022716,OMIM:309400,Orphanet:ORPHA565,SNOMED CT:59178007 Menkes kinky-hair syndrome germline X 78015753 CATGGTGCTTTTTATGTTAACTTATATCCAGTGAAGAACAAGTGGATGTGGAACTTGTACA 104894375 24188 NM_005888.3(SLC25A3):c.215G>A (p.Gly72Glu) SLC25A3 Mar 01, 2007 MedGen:C1835845,OMIM:610773,Orphanet:ORPHA91130 Mitochondrial phosphate carrier deficiency germline 12 98595490 GCAGATTCTTTATCCTTTGTGGACTTGGAGGAATTATTAGCTGTGGCACAACACATACAGC 77563738 125897 NM_001282227.1(ADA2):c.380G>A (p.Arg127Gln) ADA2 Mar 06, 2014 MedGen:C3887654,OMIM:615688 Polyarteritis nodosa, childhoood-onset germline 22 17207107 GTTCCAAGTGGATTCTGCTGGAGGATTATCGGAAGCGGGTGCAGAACGTCACTGAGTTTGA 797045138 205410 NM_001909.4(CTSD):c.1196G>A (p.Arg399His) CTSD Nov 11, 2014 MedGen:C1864669,OMIM:610127,Orphanet:ORPHA228337 Ceroid lipofuscinosis neuronal 10 germline 11 1753546 TCATCGGCCGCTACTACACTGTGTTTGACCGTGACAACAACAGGGTGGGCTTCGCCGAGGC 760891216 259771 NM_000094.3(COL7A1):c.7723G>A (p.Gly2575Arg) COL7A1 Feb 27, 2016 MedGen:CN517202 not provided germline 3 48568819 AAGGGAGAGCCTGGTGACAAGGGCTCAGCCGGGTTGCCAGGACTGCGTGGACTCCTGGGAC 587779465 106902 NM_000090.3(COL3A1):c.3509G>A (p.Gly1170Asp) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189008126 TTGGACCACCAGGGCCTCGAGGTAACAGAGGTGAAAGAGGATCTGAGGTAAGACATCACTT 876661024 416950 NM_000314.6(PTEN):c.635-1G>A PTEN Mar 01, 2017 MedGen:C1959582,OMIM:601728,Orphanet:ORPHA306498 PTEN hamartoma tumor syndrome unknown 10 87957852 AAATAATACTGGTATGTATTTAACCATGCAGATCCTCAGTTTGTGGTCTGCCAGCTAAAGG 80338679 34061 NM_000528.3(MAN2B1):c.2165+1G>A MAN2B1 May 03, 2012 MedGen:C0024748,OMIM:248500,Orphanet:ORPHA61,SNOMED CT:124466001 Deficiency of alpha-mannosidase not provided 19 12650103 AGAGTGGTCGGTGGGGCCGATACCTGTGGGGTGAGTGGCACAGGCTGGGAGAGGGGTGTGG 869312168 214167 NM_001615.3(ACTG2):c.113G>A (p.Arg38His) ACTG2 May 02, 2015 MedGen:C0238062,Orphanet:ORPHA2978 Chronic intestinal pseudoobstruction germline 2 73901424 CCCGGGCTGTCTTCCCCTCCATTGTGGGCCGCCCTCGCCACCAGGTGCGTGCTCATCTGGA 371904655 191450 NM_194318.3(B3GLCT):c.1065-1G>A B3GLCT Apr 16, 2015 MedGen:C0796012,OMIM:261540 Peters plus syndrome germline 13 31317565 ATCATGATTTGTGTTCCCTTTGGCATCTCAGTATCTCCAGGCTCCAGCACTTGCTTAGCTG 794728625 197538 NM_130799.2(MEN1):c.784-9G>A MEN1 Jan 13, 2017 MeSH:D018761,MedGen:C0025267,OMIM:131100,Orphanet:ORPHA652,SNOMED CT:30664006;MedGen:CN517202;MedGen:CN169374 Multiple endocrine neoplasia, type 1;not provided;not specified germline 11 64807228 CCTGTTCCGTGGCTCATAACTCTCTCCTTCGGCTCCTAGAAGCTGCTCTGGCTGCTCTATG 121908527 20687 NM_000030.2(AGXT):c.698G>A (p.Arg233His) AGXT May 24, 2016 MedGen:C0268164,OMIM:259900,Orphanet:ORPHA93598,SNOMED CT:65520001 Primary hyperoxaluria, type I germline;unknown 2 240875126 TCTTTCTCCCCAGAAAGAAGATGTACTCCCGCAAGACGAAGCCCTTCTCCTTCTACCTGGA 398124477 102274 NM_138694.3(PKHD1):c.1694-1G>A PKHD1 Mar 26, 2013 MedGen:C0085548,OMIM:263200,Orphanet:ORPHA731,SNOMED CT:28770003 Autosomal recessive polycystic kidney disease germline 6 52055730 TGCCTTTCTATTTTATCTGAACTGCATCCAGGCCCAGAAGTTTCCAACTCTGATGGGGACC 118204018 16672 NM_000018.3(ACADVL):c.1246G>A (p.Ala416Thr) ACADVL Feb 01, 2001 MedGen:C3887523,OMIM:201475,Orphanet:ORPHA26793,SNOMED CT:237996001,SNOMED CT:237997005 Very long chain acyl-CoA dehydrogenase deficiency germline 17 7223707 CAGGGAGCCACGGACTTCCAGATAGAGGCCGCCATCAGCAAAATCTTTGGCTCGGTGAGGT 61754011 15344 NM_000552.4(VWF):c.1648G>A (p.Gly550Arg) VWF Oct 01, 2006 MedGen:CN517202;MedGen:C1282968,Orphanet:ORPHA166084 not provided;von Willebrand disease, type 2a germline 12 6057930 GGGCTGGCGGAGCCCCGGGTGGAGGACTTCGGGAACGCCTGGAAGCTGCACGGGGACTGCC 864622358 222013 NM_001080463.1(DYNC2H1):c.2702+1G>A DYNC2H1 Aug 28, 2015 MedGen:C0265275,Orphanet:ORPHA474,SNOMED CT:75049004 Jeune thoracic dystrophy germline 11 103143396 AAAGGGGAAAGAAGTAGAACGACTTCCAAGGTATTGGAGGTTAATGTAGTACTTACGTACC 886039702 260325 NM_003688.3(CASK):c.2100G>A (p.Trp700Ter) CASK Aug 09, 2016 MedGen:CN517202 not provided germline X 41542746 CAAACAGGAGCAGCAGGCCAGCTGTACTTGGTTTGGCAAGAAAAAGAAGCAGTACAAAGAT 387906303 18745 NM_000527.4(LDLR):c.670G>A (p.Asp224Asn) LDLR Mar 30, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11105576 TGGCGCTGTGATGGTGGCCCCGACTGCAAGGACAAATCTGACGAGGAAAACTGCGGTATGG 753564352 200109 NM_000255.3(MUT):c.1663G>A (p.Ala555Thr) MUT Dec 19, 2013 MedGen:C1855114,OMIM:251000;MedGen:CN517202 Methylmalonic aciduria due to methylmalonyl-CoA mutase deficiency;not provided germline 6 49444652 GATGGAAATATCCTGGCTCTTGCAGTGGATGCATCTCGGGCAAGGTGAAGATATATAAGTT 398123108 98234 NM_000033.3(ABCD1):c.1866-10G>A ABCD1 Nov 18, 2016 MedGen:C0162309,OMIM:300100,Orphanet:ORPHA43,SNOMED CT:65389002;MedGen:CN517202 Adrenoleukodystrophy;not provided germline X 153743211 TGGAGGGTGCACAGACTCTCCTCTCGGCCCGGACCCCCAGGCCCAAGTACGCCCTCCTGGA 886041089 263803 NM_002024.5(FMR1):c.990+1G>A FMR1 Feb 11, 2016 Human Phenotype Ontology:HP:0001249,MedGen:C1843367 Intellectual disability de novo X 147936614 GAAAATGAGAAAAATGTTCCACAAGAAGAGGTATGTTACAGTGCGAATATTTTGTGGCACA 112456072 32257 NM_000090.3(COL3A1):c.3563G>A (p.Gly1188Glu) COL3A1 Mar 09, 2000 MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189008961 CAGGCCACCCAGGGCAACCAGGCCCTCCTGGACCTCCTGGTGCCCCTGGTCCTTGCTGTGG 878854441 240029 NM_001277115.1(DNAH11):c.3122G>A (p.Trp1041Ter) DNAH11 Mar 28, 2016 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244 Ciliary dyskinesia germline 7 21600797 GAAACACCCTGGAGACCCACACTTACCTCTGGGTGGATGATCGAGCTGAGTTTATGAAGCA 137852514 25044 NM_000216.3(ANOS1):c.774G>A (p.Trp258Ter) ANOS1 Sep 01, 1992 MedGen:C1563719,OMIM:308700 Kallmann syndrome 1 germline X 8585349 TCAACTGACTGACATAAGACCCAGCCGATGGTACCAGTTTCGAGTGGCTGCTGTGAATGTG 397514642 48617 NM_022095.3(ZNF335):c.3332G>A (p.Arg1111His) ZNF335 Feb 25, 2013 MedGen:C3554499,OMIM:615095,Orphanet:ORPHA329228 Primary autosomal recessive microcephaly 10 germline 20 45950453 AGCCTTTTGCATGCCACCTCTGCGGGCAGCGGTGAGGCCAGATACTGGTGGGTGGGGACTG 34995376 16981 NM_198578.3(LRRK2):c.4322G>A (p.Arg1441His) LRRK2 Sep 13, 2012 MedGen:C1846862,OMIM:607060 Parkinson disease 8, autosomal dominant germline 12 40310435 AGAGGGTTTTGTGTCTTTCCCTCCAGGCTCGCGCTTCTTCTTCCCCTGTGATTCTCGTTGG 121908072 19141 NM_138691.2(TMC1):c.1714G>A (p.Asp572Asn) TMC1 Jun 08, 2015 MedGen:C1847626,OMIM:606705;MedGen:CN043648,Orphanet:ORPHA87884 Deafness, autosomal dominant 36;Nonsyndromic hearing loss and deafness germline 9 72816161 TGTCTCCTCTAGCCTTCATACACCGAATTCGACATCAGTGGCAACGTCCTCGCTCTGATCT 80356700 32571 NM_000083.2(CLCN1):c.689G>A (p.Gly230Glu) CLCN1 Jul 17, 2017 MedGen:C2936781,OMIM:160800,SNOMED CT:57938005;MedGen:C0027127,Orphanet:ORPHA206973;MedGen:CN517202 Congenital myotonia, autosomal dominant form;Myotonia congenita;not provided germline 7 143321841 CTGCGGGCCTGGGCAGTGGCATCCCCGTGGGGAAAGAGGTAGGCCTGGCATGACTGAAGCC 104886003 28694 NM_006218.3(PIK3CA):c.1633G>A (p.Glu545Lys) PIK3CA May 31, 2016 Human Phenotype Ontology:HP:0030078,MeSH:C538231,MedGen:C0152013;MedGen:C0007112;MedGen:C0278701;Human Phenotype Ontology:HP:0010796,MedGen:C0677865;MedGen:C0858252,Orphanet:ORPHA213528;MedGen:C0699790,OMIM:114500,SNOMED CT:269533000;Human Phenotype Ontology:HP:0011459,MedGen:C0152018,Orphanet:ORPHA70482;MedGen:C0235782;MeSH:D015179,MedGen:CN236642;Human Phenotype Ontology:HP:0100843,MeSH:D005909,MedGen:C0017636,SNOMED CT:63634009;MedGen:C2239176,OMIM:114550,Orphanet:ORPHA88673,SNOMED CT:187769009,SNOMED CT:25370001;MedGen:C0022603,OMIM:182000;MeSH:C562393,MedGen:C0151779,SNOMED CT:93655004;MedGen:C0153574,Orphanet:ORPHA213569;MedGen:C1865285,OMIM:602501;MeSH:D009303,MedGen:C0027439;Human Phenotype Ontology:HP:0030692,MeSH:D001932,MedGen:C0006118,SNOMED CT:126952004;Human Phenotype Ontology:HP:0006753,MeSH:D013274,MedGen:C0038356,OMIM:613659,SNOMED CT:126824007;Human Phenotype Ontology:HP:0100013,MeSH:D001943,MedGen:C1458155,Orphanet:ORPHA180250,SNOMED CT:126926005;Human Phenotype Ontology:HP:0030358,MeSH:D002289,MedGen:C0007131,SNOMED CT:254637007;MeSH:D010051,MedGen:CN236629;MedGen:C0279663;MedGen:C0677886,Orphanet:ORPHA398934;Human Phenotype Ontology:HP:0006725,MedGen:C0281361;MeSH:C538614,MedGen:C1336078;Human Phenotype Ontology:HP:0005584,MeSH:D002292,MedGen:C0007134,OMIM:605074,Orphanet:ORPHA217071,SNOMED CT:41607009;Human Phenotype Ontology:HP:0100242,MedGen:C1261473;Gene:7864,Human Phenotype Ontology:HP:0030357,MeSH:D055752,MedGen:C0149925,OMIM:182280,Orphanet:ORPHA70573;Human Phenotype Ontology:HP:0030359,MedGen:C0149782;MeSH:C535575,MedGen:C1168401,OMIM:275355,Orphanet:ORPHA67037;Human Phenotype Ontology:HP:0006740,MedGen:C0279680;MedGen:C0280630;MeSH:D002583,MedGen:CN236667 Adenocarcinoma of lung;Adenocarcinoma of prostate;Adenocarcinoma of stomach;Brainstem glioma;Breast adenocarcinoma;Carcinoma of colon;Carcinoma of esophagus;Carcinoma of gallbladder;Colorectal Neoplasms;Glioblastoma;Hepatocellular carcinoma;Keratosis, seborrheic;Malignant melanoma of skin;Malignant neoplasm of body of uterus;Megalencephaly cutis marmorata telangiectatica congenita;Nasopharyngeal Neoplasms;Neoplasm of brain;Neoplasm of stomach;Neoplasm of the breast;Non-small cell lung cancer;Ovarian Neoplasms;Ovarian Serous Cystadenocarcinoma;Ovarian epithelial cancer;Pancreatic adenocarcinoma;Papillary renal cell carcinoma, sporadic;Renal cell carcinoma, papillary, 1;Sarcoma;Small cell lung cancer;Squamous cell carcinoma of lung;Squamous cell carcinoma of the head and neck;Transitional cell carcinoma of the bladder;Uterine Carcinosarcoma;Uterine cervical neoplasms somatic 3 179218303 TCTACACGAGATCCTCTCTCTGAAATCACTGAGCAGGAGAAAGATTTTCTATGGAGTCACA 1060500273 401699 NM_000267.3(NF1):c.2991-1G>A NF1 Jun 19, 2017 MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003 Neurofibromatosis, type 1 germline 17 31230259 TAATTTTTTTATTGTTTCTATGTCTATATAGGTATGTTCGTGTGCTTGGGAATATGGTCCA 72656360 457602 NM_000089.3(COL1A2):c.389G>A (p.Gly130Asp) COL1A2 Apr 04, 2017 MedGen:C0268335,OMIM:130000,Orphanet:ORPHA287,SNOMED CT:20766005,SNOMED CT:83470009;MedGen:C0023931,OMIM:166200,SNOMED CT:385482004 Ehlers-Danlos syndrome, classic type;Osteogenesis imperfecta type I germline 7 94404849 TGGGTCTCCCATTTTCTTAGGGTCCTGCAGGTGCTCGTGGTCCAGCTGGCCCTCCTGGCAA 775014444 264891 NM_005993.4(TBCD):c.1423G>A (p.Ala475Thr) TBCD Oct 11, 2016 MedGen:CN517202 not provided germline 17 82870328 GACGCCGCCTGCTACGTGTGCTGGGCCTTCGCGCGTGCCTATGAGCCTCAGGAGCTGAAGC 199422247 47556 NM_001363.4(DKC1):c.911G>A (p.Ser304Asn) DKC1 May 10, 2012 MedGen:C1148551,OMIM:305000 Dyskeratosis congenita X-linked not provided X 154769306 CATCTCATAAACGGCTGGTTATGAAAGACAGTGCAGTAAGTTCCGGGTTAGGAGTTTATAT 786204929 187353 NM_000314.6(PTEN):c.385G>A (p.Gly129Arg) PTEN Nov 23, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline 10 87933144 GTTGCAGCAATTCACTGTAAAGCTGGAAAGGGACGAACTGGTGTAATGATATGTGCATATT -1 442373 NM_033380.2(COL4A5):c.2414G>A (p.Gly805Glu) COL4A5 Aug 30, 2017 MedGen:CN517202 not provided germline X 108614929 TATTTCTTAAAGGTGATGTTGGACCAAATGGACAACCTGGACCAATGGGACCTCCTGGGCT 267606920 28942 NM_002524.4(NRAS):c.179G>A (p.Gly60Glu) NRAS Aug 01, 2017 MedGen:C0041409,OMIM:163950;MedGen:C2750732,OMIM:613224;MedGen:CN517202 Noonan syndrome 1;Noonan syndrome 6;not provided germline 1 114713911 CCTGTTTGTTGGACATACTGGATACAGCTGGACAAGAAGAGTACAGTGCCATGAGAGACCA 387907119 40095 NM_174917.4(ACSF3):c.1412G>A (p.Arg471Gln) ACSF3 Aug 14, 2011 MedGen:C3280314,OMIM:614265,Orphanet:ORPHA289504 Combined malonic and methylmalonic aciduria germline 16 89145312 TTAAGGATGGCCAGTACTGGATCCGAGGCCGGACCTCAGTGGACATCATCAAGACTGGAGG 754258809 431494 NM_207189.3(BRDT):c.2783G>A (p.Gly928Asp) BRDT Aug 28, 2017 MedGen:CN424852,OMIM:617644 SPERMATOGENIC FAILURE 21 germline 1 92014213 AAAATTTTCTGCTTTTTCTACAGATGGTGGGTACCATTGATATGACCCTTCAAAGTGACAT 121965007 15274 NM_000398.6(CYB5R3):c.173G>A (p.Arg58Gln) CYB5R3 May 01, 2008 MedGen:C2749559 Methemoglobinemia, type I germline 22 42631431 CCTCTCTCCAGATCATCAGCCATGACACCCGGCGCTTCCGCTTTGCCCTGCCGTCACCCCA 1064794076 411386 NM_000377.2(WAS):c.273+1G>A WAS Aug 14, 2015 MedGen:CN517202 not provided germline X 48684424 TCCTACTTCATCCGCCTTTACGGCCTTCAGGTGACCCCCCCACCCCCGACTGGACTTGCAA 80338722 21041 NM_014251.2(SLC25A13):c.1177+1G>A SLC25A13 Jun 14, 2016 MedGen:C1997910,SNOMED CT:429735007;MedGen:C1863844,OMIM:603471,Orphanet:ORPHA247585;MedGen:C1853942,OMIM:605814,Orphanet:ORPHA247598 Citrin deficiency;Citrullinemia type II;Neonatal intrahepatic cholestasis caused by citrin deficiency germline 7 96184276 GCTATGAAGGCTTCTTTGGACTGTATAGAGGTTAGTGCCACATGCTCAATACCTGTTAGGT 104894965 24787 NM_003140.2(SRY):c.209G>A (p.Trp70Ter) SRY Nov 01, 1992 MedGen:C2748896,OMIM:400044 46,XY sex reversal, type 1 germline Y 2787395 TGAAGCGACCCATGAACGCATTCATCGTGTGGTCTCGCGATCAGAGGCGCAAGATGGCTCT 587783979 168450 NM_133433.3(NIPBL):c.5709+1G>A NIPBL Feb 08, 2013 MedGen:CN029798,OMIM:122470 Cornelia de Lange syndrome 1 germline 5 37024720 CGCAGAGTCAATGATGAAGAGGGCATTAAGGTAGTGTTGACTGTTTTAAATTTATTTTTCA 139517732 27695 NM_001256850.1(TTN):c.160G>A (p.Val54Met) TTN Feb 22, 2002 MedGen:C1858763,OMIM:604145 Dilated cardiomyopathy 1G germline 2 178802273 CAGGTGATTTCCACTTCCACTCTGCCCGGCGTGCAGATCTCCTTTAGCGATGGCCGCGCTA 727503503 176214 NM_000363.4(TNNI3):c.509G>A (p.Arg170Gln) TNNI3 May 04, 2017 Human Phenotype Ontology:HP:0001638,MedGen:C0878544,Orphanet:ORPHA167848,SNOMED CT:85898001;Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569;MedGen:CN517202 Cardiomyopathy;Hypertrophic cardiomyopathy;not provided germline 19 55154070 GGGCCCGGGCTAAGGAGTCCCTGGACCTGCGGGCCCACCTCAAGCAGGTGAAGAAGGAGGA 386833990 71193 NM_012434.4(SLC17A5):c.291G>A (p.Thr97=) SLC17A5 May 13, 2015 MedGen:C1096903,OMIM:604369,Orphanet:ORPHA309334,SNOMED CT:87074006;MedGen:CN517202 Salla disease;not provided germline 6 73644407 TGCTCCCATAAAAGTTCATCATAATCAAACGGTAGGTGCTATTTTTTAAGGAAACAATTTT 137854482 31502 NM_000138.4(FBN1):c.3386G>A (p.Cys1129Tyr) FBN1 Aug 19, 1999 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006 Marfan syndrome germline 15 48487389 GAGATCCTCTCCTATGCCGAGGTGGTGTTTGCCATAACACAGAGGGAAGTTACCGCTGTGA 121913589 29215 NM_000530.7(MPZ):c.293G>A (p.Arg98His) MPZ Jun 27, 2017 MedGen:C0270912,OMIM:118200,Orphanet:ORPHA101082,SNOMED CT:42986003;MedGen:C0751036,Orphanet:ORPHA65753,SNOMED CT:398040009;Human Phenotype Ontology:HP:0000762,MedGen:C1857640;Human Phenotype Ontology:HP:0008944,MedGen:C1836451;Human Phenotype Ontology:HP:0002460,MedGen:C1864696;Human Phenotype Ontology:HP:0001761,MedGen:C0728829;Human Phenotype Ontology:HP:0000763,MedGen:C0151313;MedGen:CN517202 Charcot-Marie-Tooth disease, demyelinating, type 1b;Charcot-Marie-Tooth disease, type I;Decreased nerve conduction velocity;Distal lower limb amyotrophy;Distal muscle weakness;Pes cavus;Sensory neuropathy;not provided germline;unknown 1 161306863 ACATTGACGAGGTGGGGACCTTCAAAGAGCGCATCCAGTGGGTAGGGGACCCTCGCTGGAA 886041299 264525 NM_003070.4(SMARCA2):c.3439G>A (p.Asp1147Asn) SMARCA2 Sep 15, 2016 MedGen:CN517202 not provided germline 9 2110400 GCAGCTGATACAGTGGTCATCTTTGACAGCGACTGGAATCCTCATCAGGTCTGCATGTCCC 137852584 24848 NM_000044.4(AR):c.1943G>A (p.Ser648Asn) AR May 25, 1995 Human Phenotype Ontology:HP:0012125,MedGen:C0376358,OMIM:176807,SNOMED CT:399068003 Malignant tumor of prostate germline X 67711459 TGAAACTACAGGAGGAAGGAGAGGCTTCCAGCACCACCAGCCCCACTGAGGAGACAACCCA 121434462 24625 m.12315G>A MT-TL2 Nov 01, 1996 MedGen:C0162666,SNOMED CT:447292006 Mitochondrial encephalomyopathy germline MT 12315 TATCCATTGGTCTTAGGCCCCAAAAATTTTGGTGCAACTCCAAATAAAAGTAATAACCATG 727504075 177924 NM_000283.3(PDE6B):c.2193+1G>A PDE6B Oct 08, 2015 Human Phenotype Ontology:HP:0000547,MeSH:D012174,MedGen:C0035334,OMIM:268000,Orphanet:ORPHA791,SNOMED CT:28835009;MedGen:C3151107,OMIM:613801 Retinitis pigmentosa;Retinitis pigmentosa 40 germline;unknown 4 664945 ATCACCAAGCCCTGGGAAGTCCAGAGCAAGGTTAGAACAGAGGGCCCTCCAGACCCAGAGT 121918369 16227 NM_001077620.2(PRCD):c.5G>A (p.Cys2Tyr) PRCD Nov 01, 2006 MedGen:C1864621,OMIM:610599 Retinitis pigmentosa 36 germline 17 76540146 CTGGGAGGGGATGGGGCAGCTGCGCCATGTGCACCACCCTTTTCCTGCTCAGCACCCTGGC 748157664 359014 NM_006412.3(AGPAT2):c.514G>A (p.Glu172Lys) AGPAT2 May 19, 2017 MedGen:C1720862,OMIM:608594;MedGen:CN517202 Congenital generalized lipodystrophy type 1;not provided germline 9 136676659 TCCCTGCAGCTCAAAGTGTGGATCTATCCCGAGGGTACTCGCAACGACAATGGGGACCTGC 886043187 269949 NM_001849.3(COL6A2):c.1053+1G>A COL6A2 Jan 22, 2016 MedGen:CN029274,OMIM:158810 Bethlem myopathy 1 germline 21 46117454 CCTGGCTGCAAGGGAGACCCTGGAAACCGGGTAAGGGCCGTTTGCACCCCTCCTTCAGCCT 193921045 442189 NM_000435.2(NOTCH3):c.146G>A (p.Cys49Tyr) NOTCH3 Dec 23, 2015 MedGen:CN517202 not provided germline 19 15197551 CAGCCCCCCCTTGCCTGGACGGAAGCCCGTGTGCAAATGGAGGTCGTTGCACCCAGCTGCC 118203941 15919 NM_000046.3(ARSB):c.1214G>A (p.Cys405Tyr) ARSB Feb 12, 2015 MedGen:C0026709,OMIM:253200,Orphanet:ORPHA583;MedGen:CN068452 Mucopolysaccharidosis type VI;Mucopolysaccharidosis, type vi, severe germline 5 78781974 ATCTAATTCTTTCAAACTATTTCTTCCCAGGTCCCAGGAACAGCATGGCTCCAGCAAAGGA 201213030 243962 NM_018076.4(ARMC4):c.2219G>A (p.Trp740Ter) ARMC4 Apr 03, 2013 MedGen:C3809548,OMIM:615451 Primary ciliary dyskinesia 23 germline 10 27936759 AGCGGTTAGCTGCTGTCACAGGGGCTATATGGAAATGTTCCATCAGCAAAGAGAATGTTAC -1 434391 NM_001199198.2(TBC1D23):c.1687+1G>A TBC1D23 Sep 29, 2017 MedGen:CN502750,OMIM:617695 PONTOCEREBELLAR HYPOPLASIA, TYPE 11 germline 3 100316188 GCATTGGGGATGAAGAAGAATACGACACAGGTGTAGTAATACACTTAGCTACAGACAGCTT 184256941 440137 NM_001080463.1(DYNC2H1):c.4073G>A (p.Arg1358His) DYNC2H1 Jun 01, 2017 MedGen:C0265275,Orphanet:ORPHA474,SNOMED CT:75049004 Jeune thoracic dystrophy unknown 11 103156716 AGTGGGTGTATTTGGAACCCATTTTCGGCCGTGGAGCATTGCCAAAAGAACAGACACGCTT 28928906 29388 NM_002435.2(MPI):c.884G>A (p.Arg295His) MPI Nov 01, 2002 MedGen:C1865145,OMIM:602579,Orphanet:ORPHA79319 Congenital disorder of glycosylation type 1B germline 15 74897050 AGTGCATGGCGTGTTCAGACAACACAGTTCGTGCTGGCCTGACACCCAAGTTCATTGATGT 786201689 183159 NM_000051.3(ATM):c.1737G>A (p.Trp579Ter) ATM Jun 29, 2015 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 11 108251966 CTTTTCTTTAAAGGAATCAATAATGAAATGGCTCTTATTCTATCAGTTAGAGGGTGACTTA 199476125 24775 m.3733G>A MT-ND1 Sep 19, 2013 Human Phenotype Ontology:HP:0001112,MedGen:C0917796,OMIM:535000,Orphanet:ORPHA104,SNOMED CT:58610003 Leber's optic atrophy germline MT 3733 CTGCGAGCAGTAGCCCAAACAATCTCATATGAAGTCACCCTAGCCATCATTCTACTATCAA -1 432708 NM_000277.2(PAH):c.978G>A (p.Trp326Ter) PAH Oct 21, 2016 MedGen:CN517202 not provided germline 12 102844423 TCAGATTGACTTTCCATTCCAGATTTACTGGTTTACTGTGGAGTTTGGGCTCTGCAAACAA 62642055 31959 NM_002272.3(KRT4):c.1303G>A (p.Glu435Lys) KRT4 Jun 01, 2003 MedGen:C1721005,OMIM:193900,Orphanet:ORPHA171723 White sponge nevus of cannon germline 12 52807687 CTCATGAGTGTGAAGCTGGCCTTGGACATCGAGATCGCCACCTACCGCAAACTGCTGGAGG 207459995 24715 m.14985G>A MT-CYB Nov 01, 1998 MedGen:CN029768 Familial colorectal cancer unknown MT 14985 CTCGAGACGTAAATTATGGCTGAATCATCCGCTACCTTCACGCCAATGGCGCCTCAATATT 551747280 424291 NM_000527.4(LDLR):c.82G>A (p.Glu28Lys) LDLR Mar 30, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11100237 TTTTCCTCTCTCTCAGTGGGCGACAGATGCGAAAGAAACGAGTTCCAGTGCCAAGACGGGA -1 444519 NM_002140.4(HNRNPK):c.1008+1G>A HNRNPK Oct 29, 2015 MedGen:CN517202 not provided germline 9 83971671 GGGAGACCTGGAGACCGTTACGACGGCATGGTAAGAACTTTGGTTTATTACCAGTGTGTTG 770689762 187232 NM_177405.2(ADA2):c.424G>A (p.Gly142Ser) ADA2 Apr 07, 2015 MedGen:C0282492,OMIM:182410,Orphanet:ORPHA820,SNOMED CT:238776001 Idiopathic livedo reticularis with systemic involvement germline 22 17182696 GATGCTCTGATGCTGAACACTACCAGAATCGGCCATGGATTTGCTTTGAGCAAACACCCCG 886041879 264791 NM_004380.2(CREBBP):c.3609+1G>A CREBBP Jul 12, 2016 MedGen:CN517202 not provided germline 16 3757808 CAGTCCCTTGGATATTGCTGTGGACGCAAGGTACAGTTTTAAGTTTTTCCGGAAAGTGAAT 281874733 47387 NM_000495.4(COL4A5):c.4271G>A (p.Gly1424Glu) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108686103 CTGGCTTTGATGGTGCAGGAGGGCGCAAAGGAGACCCAGGTCTGCCAGGACAGCCAGGTAA -1 438552 NM_018890.3(RAC1):c.53G>A (p.Cys18Tyr) RAC1 Oct 31, 2017 MedGen:CN580791,OMIM:617751 MENTAL RETARDATION, AUTOSOMAL DOMINANT 48 germline 7 6387229 TCTTTCTCTTTAGAGCTGTAGGTAAAACTTGCCTACTGATCAGTTACACAACCAATGCATT 63751632 95404 NM_000249.3(MLH1):c.1896G>A (p.Glu632=) MLH1 Jul 12, 2017 MedGen:C0009405,Orphanet:ORPHA443090;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:CN517202 Hereditary nonpolyposis colon cancer;Lynch syndrome;not provided germline 3 37047683 TGCAGACTATTTCTCTTTGGAAATTGATGAGGTGTGACAGCCATTCTTATACTTCTGTTGT 62623459 28341 NM_000506.3(F2):c.598G>A (p.Glu200Lys) F2 Jun 01, 1983 na PROTHROMBIN TYPE 3 germline 11 46725897 CAAGTCACTGTAGCGATGACTCCACGCTCCGAAGGCTCCAGTGTGAATCTGTCACCTCCAT 111033383 57351 NM_194248.2(OTOF):c.2153G>A (p.Trp718Ter) OTOF Oct 17, 2012 MedGen:CN043648,Orphanet:ORPHA87884 Nonsyndromic hearing loss and deafness germline 2 26479325 GAAAGCCCTGCATCTACATCAAGAGCTGGTGGCCGGACCAGCGCCGCCGCCTCTACAATGC 796051877 185936 NM_000152.4(GAA):c.1437G>A (p.Lys479=) GAA Dec 21, 2014 MedGen:C0017921,OMIM:232300,Orphanet:ORPHA365,SNOMED CT:124462004,SNOMED CT:237967002 Glycogen storage disease, type II germline 17 80110055 CAACGAGACCGGCCAGCCGCTGATTGGGAAGGTAGGGCGAGGGTCCAGGGGACGGGGGTTA 63750570 29291 NM_016835.4(MAPT):c.1960G>A (p.Val654Met) MAPT Mar 01, 2001 Human Phenotype Ontology:HP:0002145,MedGen:C0338451,OMIM:600274,Orphanet:ORPHA282,SNOMED CT:230270009;MedGen:CN517202 Frontotemporal dementia;not provided germline 17 46018629 TGTGTGTGTTGTGTTCTAGGAGGTGGCCAGGTGGAAGTAAAATCTGAGAAGCTTGACTTCA 587781259 165811 NM_017617.4(NOTCH1):c.4487G>A (p.Cys1496Tyr) NOTCH1 Sep 04, 2014 MedGen:C4014970,OMIM:616028 Adams-Oliver syndrome 5 de novo;germline 9 136505409 CCTGGAAGAACTGCACGCAGTCTCTGCAGTGCTGGAAGTACTTCAGTGACGGCCACTGTGA 1057517710 360547 NM_000061.2(BTK):c.1103G>A (p.Gly368Glu) BTK Jul 17, 2015 MedGen:CN517202 not provided germline X 101357583 CCAACAGCATGACCTCTCTCTCTGTTTCAGGACTCATATCCAGGCTCAAATATCCAGTGTC 1131691060 420745 NM_003000.2(SDHB):c.424-1G>A SDHB Dec 21, 2015 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 1 17027866 TTCTTCTTCTTCTTCTTCCTCTTAACCACAGGATTTGAGCAACTTCTATGCACAGTACAAA 730880460 48906 NM_005343.3(HRAS):c.179G>A (p.Gly60Asp) HRAS Mar 10, 2014 MedGen:CN517202 not provided germline 11 533877 CGTGCCTGTTGGACATCCTGGATACCGCCGGCCAGGAGGAGTACAGCGCCATGCGGGACCA 587782070 151580 NM_007194.3(CHEK2):c.279G>A (p.Trp93Ter) CHEK2 Aug 31, 2017 MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Familial cancer of breast;Hereditary cancer-predisposing syndrome;not provided germline 22 28734443 AGAACCTGAGGAGCCTACCCCTGCCCCCTGGGCTCGATTATGGGCCCTTCAGGATGGATTT 121964848 27510 NM_001159287.1(TPI1):c.236G>A (p.Cys79Tyr) TPI1 Jan 01, 1997 MedGen:C1860808,OMIM:615512,Orphanet:ORPHA868 Triosephosphate isomerase deficiency germline 12 6868873 GTGGTACCATCTTGTCCTCAGAGGTGGTTTGTGCTCCCCCTACTGCCTATATCGACTTCGC 1085307154 414080 NM_001204.6(BMPR2):c.48G>A (p.W16*) BMPR2 Jun 27, 2017 MedGen:C0152171,OMIM:178600,SNOMED CT:26174007 Primary pulmonary hypertension germline 2 202377522 GCGGCCCTGGCGGGTGCCCTGGCTACCATGGACCATCCTGCTGGTCAGCACTGCGGCTGGT 749035807 426808 NM_001171.5(ABCC6):c.4189G>A (p.Asp1397Asn) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16154647 CTGCCCGGCCAGCTGCAGTACAAGTGTGCTGACCGAGGCGAGGACCTGAGGTATGGTCGTC 104894633 17988 NM_030665.3(RAI1):c.5423G>A (p.Ser1808Asn) RAI1 Nov 01, 2005 MedGen:C0795864,OMIM:182290,Orphanet:ORPHA819,SNOMED CT:401315004 Smith-Magenis syndrome germline 17 17798371 CAGCCGACAAGGGTCGCAAACATGAGTGCAGCAAGGAGGCTCCGGCAGAGCCCGGCGGGGA 796052064 200593 NM_000030.2(AGXT):c.996G>A (p.Trp332Ter) AGXT Oct 10, 2016 MedGen:C0268164,OMIM:259900,Orphanet:ORPHA93598,SNOMED CT:65520001 Primary hyperoxaluria, type I germline;unknown 2 240878075 CACTGTGGCTGTACCCGCTGGCTATGACTGGAGAGACATCGTCAGCTACGTCATAGACCAC 1057519503 362227 NM_000265.5(NCF1):c.*154+25G>A NCF1 Apr 27, 2016 MedGen:C1861862,OMIM:115197 Familial hypertrophic cardiomyopathy 4 unknown 7 74789339 GAGTGGACCGAGGCTCTGCAGGAATGCAGGGAGGGCCGGGCTCCGCCCCAGGGTTATTTCT 794728209 197722 NM_000138.4(FBN1):c.3712+1G>A FBN1 Aug 08, 2014 MedGen:CN517202 not provided germline 15 48485373 CACTAATGCCTGACCAGAGATCATGCACCGGTGAGTAGGTTCTAGCCTCATGTTGAATCTC 201188361 40345 NM_014714.3(IFT140):c.634G>A (p.Gly212Arg) IFT140 Jun 01, 2017 MedGen:C0265275,Orphanet:ORPHA474,SNOMED CT:75049004;MedGen:C1849437,OMIM:266920,Orphanet:ORPHA140969;MedGen:CN517202 Jeune thoracic dystrophy;Renal dysplasia, retinal pigmentary dystrophy, cerebellar ataxia and skeletal dysplasia;not provided germline;maternal 16 1592176 GGGCTGTTGTTCTTTGTCAGTCTGATGGACGGTGAGGAACTTTGGTTGTGATTCTCAGGGG 63751165 29293 NM_016835.4(MAPT):c.1865G>A (p.Ser622Asn) MAPT Feb 25, 1999 Human Phenotype Ontology:HP:0002145,MedGen:C0338451,OMIM:600274,Orphanet:ORPHA282,SNOMED CT:230270009;MedGen:CN517202 Frontotemporal dementia;not provided germline 17 46010401 ATAATATCAAACACGTCCCGGGAGGCGGCAGTGTGAGTACCTTCACACGTCCCATGCGCCG 774663443 198452 NM_004572.3(PKP2):c.369G>A (p.Trp123Ter) PKP2 Feb 01, 2017 MedGen:CN517202 not provided germline 12 32878511 TGGCACAACTGCCACTTATGAAGGTCGCTGGGGAAGAGGAACAGCACAGTACAGCTCCCAG 137853867 40505 NM_000942.4(PPIB):c.343+1G>A PPIB Oct 31, 2016 MedGen:CN517202 not provided germline;unknown 15 64160103 GAGACTTCACCAGGGGAGATGGCACAGGAGGTAACCACAGGTCCTCTGGGCCAAGGAGTAT 267607879 95447 NM_000249.3(MLH1):c.1989+1G>A MLH1 Sep 05, 2013 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Lynch syndrome germline 3 37048610 CCTATCTTCATTCTTCGACTAGCCACTGAGGTCAGTGATCAAGCAGATACTAAGCATTTCG 121908577 21209 NM_004328.4(BCS1L):c.548G>A (p.Arg183His) BCS1L Feb 22, 2007 MedGen:C0266006,OMIM:262000,Orphanet:ORPHA123,SNOMED CT:67817003 Pili torti-deafness syndrome germline 2 218661846 GCTCTGAATGGCGTCCCTTTGGCTATCCACGCCGCCGGCGACCACTGAATTCTGTGGTTCT 28940268 17893 NM_173076.2(ABCA12):c.4142G>A (p.Gly1381Glu) ABCA12 Sep 15, 2003 MedGen:C1832550,OMIM:601277 Autosomal recessive congenital ichthyosis 4A germline 2 214986563 GGCATATTACTTCATTGCTGGGGCCCAATGGAGCTGGGAAAACTACTACCATGTATGTTAA -1 446394 NM_000268.3(NF2):c.122G>A (p.Trp41Ter) NF2 May 05, 2017 MedGen:CN517202 not provided germline 22 29636758 TCCCCATTGGTTTGTTATTGCAGATGAAGTGGAAAGGGAAGGACCTCTTTGATTTGGTGTG 267607015 22143 NM_002942.4(ROBO2):c.3706G>A (p.Ala1236Thr) ROBO2 Apr 01, 2007 MedGen:C1970483,OMIM:610878 Vesicoureteral reflux 2 germline 3 77622378 GAAGCTTTAGAAATCCCCAGGCCCCTGAGAGCACTGGACCAGACTCCTGGATCCAGCATGG 397517148 49142 NM_005633.3(SOS1):c.1300G>A (p.Gly434Arg) SOS1 Nov 13, 2012 MeSH:D009634,MedGen:C0028326,Orphanet:ORPHA648,SNOMED CT:205824006 Noonan syndrome germline 2 39023128 GAGATTCAGAAGAATATTGATGGTTGGGAGGGAAAAGACATTGGACAGTGTTGTAATGAAT 137853036 21508 NM_001430.4(EPAS1):c.1609G>A (p.Gly537Arg) EPAS1 Apr 03, 2009 MedGen:C2673187,OMIM:611783 Erythrocytosis, familial, 4 germline 2 46380281 GAGACACTGGCACCCTATATCCCCATGGACGGGGAAGACTTCCAGCTAAGCCCCATCTGCC 119481075 19913 NM_000197.1(HSD17B3):c.239G>A (p.Arg80Gln) HSD17B3 Jul 13, 2017 MedGen:C0033804;MedGen:C0268296,OMIM:264300,Orphanet:ORPHA752,SNOMED CT:50658006;MedGen:C0268296,OMIM:264300,Orphanet:ORPHA752,SNOMED CT:50658006;MedGen:CN517202 Pseudohermaphroditism;Testosterone 17-beta-dehydrogenase deficiency;Testosterone 17-beta-dehydrogenase deficiency;not provided germline;unknown 9 96254906 AACGTGGACTCAATGTTGTCCTTATTAGCCGGACGCTGGAAAAACTAGAGGCCATTGCCAC 267606960 19039 NM_017739.3(POMGNT1):c.1469G>A (p.Cys490Tyr) POMGNT1 Oct 17, 2016 MedGen:C3150412,OMIM:613151;MedGen:C0457133,OMIM:253280,Orphanet:ORPHA588,SNOMED CT:277950001 Congenital muscular dystrophy-dystroglycanopathy with mental retardation, type B3;Muscle eye brain disease germline;unknown 1 46192168 GGATGCCTGAACAACGCCGGGGCCGAGAGTGCATCATCCCTGACGTTTCCCGATCCTACCA 137852777 17104 NM_018100.3(EFHC1):c.628G>A (p.Asp210Asn) EFHC1 Jul 11, 2017 MedGen:C1850778,OMIM:254770;na Juvenile myoclonic epilepsy;Myoclonic epilepsy, juvenile 1 germline 6 52452742 GAGTTAAATCCACCAGAGAAGATGGCTCTTGATCCTTACACTGAACTCCGAAAACAGCCTC 879254644 245737 NM_000527.4(LDLR):c.692G>A (p.Cys231Tyr) LDLR Mar 25, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11105598 ACTGCAAGGACAAATCTGACGAGGAAAACTGCGGTATGGGCGGGGCCAGGGTGGGGGCGGG 387906940 39535 NM_014762.3(DHCR24):c.1438G>A (p.Glu480Lys) DHCR24 Jul 01, 2011 MedGen:C1865596,OMIM:602398,Orphanet:ORPHA35107 Desmosterolosis germline 1 54852346 CTGTATGCCGACTGCTACATGAACCGGGAGGAGTTCTGGGAGATGTTTGATGGCTCCTTGT 587784105 168168 NM_022455.4(NSD1):c.3839G>A (p.Trp1280Ter) NSD1 Feb 08, 2013 MedGen:CN035106,OMIM:117550 Sotos syndrome 1 germline 5 177235863 AGAAGAAACGCCTTAGGAAGCCAAGCAAGTGGCTTTTGGAATATACAGAAGAATATGATCA 886040950 262857 NM_000059.3(BRCA2):c.9118-1G>A BRCA2 Apr 11, 2016 MedGen:C2675520,OMIM:612555 Breast-ovarian cancer, familial 2 germline 13 32380006 ATATGTTGAATTTTTGTTTTGTTTTCTGTAGGTTTCAGATGAAATTTTATTTCAGATTTAC 886039267 259371 NM_001242896.1(DEPDC5):c.3696+5G>A DEPDC5 Apr 13, 2016 Gene:50987,MedGen:C1858477,OMIM:604364 Epilepsy, familial focal, with variable foci 1 germline 22 31874410 AGGCGATGGCCATTGACATCATGCAGGTGAGACAGCAAGAGGGGCCCATAGAGCTGTTTGC 121918656 27845 NM_004959.4(NR5A1):c.3G>A (p.Met1Ile) NR5A1 Mar 19, 2009 MedGen:C2751824,OMIM:612965,Orphanet:ORPHA98085;MedGen:C2751825,OMIM:612964 46,XY sex reversal, type 3;Premature ovarian failure 7 germline 9 124503393 TGTCCCTCCGCAGGCGGACGCCGCGGGCATGGACTATTCGTACGACGAGGACCTGGACGAG 794728811 196751 NM_001035.2(RYR2):c.14876G>A (p.Arg4959Gln) RYR2 Mar 02, 2017 MedGen:C4053736,OMIM:604772;MedGen:CN517202 Catecholaminergic polymorphic ventricular tachycardia type 1;not provided germline 1 237832619 GGGAATTTTTCCCAGCAGGGGATTGCTTCCGGAAACAGTATGAAGACCAGCTAAATTAAAC 104894689 19269 NM_024301.4(FKRP):c.764G>A (p.Trp255Ter) FKRP Dec 01, 2003 MedGen:C1846672,OMIM:607155,Orphanet:ORPHA34515 Limb-girdle muscular dystrophy-dystroglycanopathy, type C5 germline 19 46756214 AGCCCCCGCTGGCCACGGCCCACGCGCGCTGGAAGGCTGAGCGCGAGGGACGCGCTCGGCG 727503428 174163 NM_000441.1(SLC26A4):c.1554G>A (p.Trp518Ter) SLC26A4 Dec 23, 2014 Human Phenotype Ontology:HP:0011387,MedGen:C1863752,OMIM:600791;MedGen:C0271829,OMIM:274600,Orphanet:ORPHA705,SNOMED CT:70348004 Enlarged vestibular aqueduct;Pendred's syndrome germline 7 107698051 CCTTGATATTTTTTCTTCTAGTCCTTCTTGGAATGGCCTTGGAAGCATCCCTAGCACAGAT 764131178 328532 NM_000053.3(ATP7B):c.3182G>A (p.Gly1061Glu) ATP7B Jan 12, 2017 MedGen:C0019202,OMIM:277900,Orphanet:ORPHA905,SNOMED CT:88518009;MedGen:CN169374 Wilson disease;not specified germline 13 51944170 TGCCCCTCAGGAAGGTTCTGGCTGTGGTGGGGACTGCGGAGGCCAGCAGTGAACACCCCTT 587779718 107236 NM_000090.3(COL3A1):c.799G>A (p.Gly267Ser) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188991004 ATAATTTTGCTGGTTTTATACATTTCCTAGGGCTTCGATGGACGAAATGGAGAAAAGGGTG 587784458 169443 NM_001083962.1(TCF4):c.1146+1G>A TCF4 Feb 08, 2013 MedGen:C1970431,OMIM:610954,Orphanet:ORPHA2896 Pitt-Hopkins syndrome germline 18 55257314 CCTAATTATGAAGGACCCTTACACTCTTTGGTATGTCTCATTTGCTAATCTCTGTCCCACC 113313967 18220 NM_138477.3(CDAN1):c.1860+5G>A CDAN1 Aug 01, 2005 MedGen:C0271933,OMIM:224120,Orphanet:ORPHA98869,SNOMED CT:59548005 Congenital dyserythropoietic anemia, type I germline 15 42731206 ACGGGGAGTCAGACGTAGACTGGCAGGTCCGAAAACAGAACAAGGGAAATAATGGGGTCTG 121912864 32391 NM_001844.4(COL2A1):c.3220G>A (p.Gly1074Ser) COL2A1 Nov 05, 1989 MedGen:C0542428,Orphanet:ORPHA93297 Hypochondrogenesis germline 12 47977373 GTGGGAGCTCCTGGAGCCCCTGGGCCCCCTGGCTCCCCTGGCCCCGCTGGTCCAACTGGCA 193066451 16269 NM_152419.2(HGSNAT):c.493+1G>A HGSNAT Oct 01, 2006 MedGen:C0086649,OMIM:252930,Orphanet:ORPHA79271,SNOMED CT:75238000 Mucopolysaccharidosis, MPS-III-C germline 8 43159045 TGAACGAGGATCCAGTTGATAGTAACCTTCGTACGTATATGTTCTCTGCTGATTTTCACAT 121912940 32194 NM_001849.3(COL6A2):c.811G>A (p.Gly271Ser) COL6A2 Sep 01, 1996 MedGen:CN029274,OMIM:158810 Bethlem myopathy 1 germline 21 46115881 TACTCTTTTCTCTGCTTTTAGGGTGCCAAGGGCAACATGGGTGAGCCGGGAGAGCCTGGCC 587783850 170007 NM_000252.2(MTM1):c.679G>A (p.Val227Met) MTM1 Feb 08, 2013 MedGen:C0410203,OMIM:310400,Orphanet:ORPHA596,SNOMED CT:46804001 Severe X-linked myotubular myopathy germline X 150645683 GATAGCTTAAACTTTCTGACTTAACCATAGGTGCTGTCATGGATTCATCCAGAAAATAAGA 104886257 36026 NM_000495.4(COL4A5):c.3808G>A (p.Gly1270Ser) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108677517 GTGGATTATTAAGGTCTACCAGGTCCAGAAGGTCCTCCAGGTCTCCCTGGAAATGGAGGTA 118204079 16592 NM_000237.2(LPL):c.1334G>A (p.Cys445Tyr) LPL Oct 03, 1996 MedGen:C0023817,OMIM:238600,Orphanet:ORPHA309015,SNOMED CT:238086005,SNOMED CT:275598004 Hyperlipoproteinemia, type I germline 8 19962126 CATCCATTTTCTTCCACAGGGTGATCTTCTGTTCTAGGGAGAAAGTGTCTCATTTGCAGAA 104886431 35628 NM_000495.4(COL4A5):c.547-1G>A COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108575909 TTCATCATTTTCTTTACTCACTTTATAACAGGGCCTACCTGGTCCCACTGGTATACCAGGG 886044766 265210 NM_000169.2(GLA):c.830G>A (p.Trp277Ter) GLA Dec 13, 2016 Human Phenotype Ontology:HP:0001071,MedGen:C0002986,OMIM:301500,Orphanet:ORPHA324,SNOMED CT:16652001 Fabry disease germline X 101398539 AGTTAGTGATTGGCAACTTTGGCCTCAGCTGGAATCAGCAAGTAACTCAGATGGCCCTCTG 397514606 48415 NM_181690.2(AKT3):c.49G>A (p.Glu17Lys) AKT3 Aug 19, 2014 MedGen:C4014738,OMIM:615937 Megalencephaly-polymicrogyria-polydactyly-hydrocephalus syndrome 2 somatic 1 243695714 CATTAACATGCGTGCTTTCCTCATGTAGGAGAATATATAAAAAACTGGAGGCCAAGATACT 137852565 24846 NM_000044.4(AR):c.2391G>A (p.Trp797Ter) AR May 01, 1990 MedGen:C0039585,OMIM:300068,SNOMED CT:12313004 Androgen resistance syndrome germline X 67721905 AATGAGGCACCTCTCTCAAGAGTTTGGATGGCTCCAAATCACCCCCCAGGAATTCCTGTGC 886041759 264877 NM_000781.2(CYP11A1):c.425+1G>A CYP11A1 May 10, 2016 MedGen:CN517202 not provided germline 15 74347899 TTACCAGAGACCCATAGGAGTCCTGTTGAAGTGAGTCCTGGGCCATCTCCCAGGGACTGGA 1057524873 444185 NM_000089.3(COL1A2):c.2342G>A (p.Gly781Asp) COL1A2 Oct 04, 2017 MedGen:CN517202 not provided germline 7 94421055 CCGGTCCTGCTGGAAGTCGTGGTGATGGAGGCCCCCCTGTGAGTATTTACAATGGACTCTC -1 438776 NM_001077488.3(GNAS):c.352G>A (p.Val118Met) GNAS Mar 31, 2017 MedGen:CN517202 not provided de novo 20 58903708 GTGGCCGCCATGAGCAACCTGGTGCCCCCCGTGGAGCTGGCCAACCCCGAGAACCAGTTCA 587779471 107062 NM_000090.3(COL3A1):c.2770G>A (p.Gly924Ser) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189004090 CCTGGCAGCCCTGGAGTGTCTGGACCAAAAGGTGATGCTGGCCAACCAGGAGAGAAGGGAT 1131690995 420495 NM_000264.4(PTCH1):c.394+1G>A PTCH1 Apr 12, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline 9 95506406 AGACCAACGTGGAGGAGCTGTGGGTGGAAGGTAAGAGCGCCCGCCGCGGCGCCCGCGCCCC 397508791 68718 NM_000492.3(CFTR):c.743+1G>A CFTR Jul 06, 2016 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008;MedGen:C0238339,OMIM:167800,Orphanet:ORPHA676,SNOMED CT:68072000 Cystic fibrosis;Hereditary pancreatitis germline 7 117535412 TGGGCTAGGGAGAATGATGATGAAGTACAGGTAGCAACCTATTTTCATAACTTGAAAGTTT 148748724 410721 NM_020533.2(MCOLN1):c.405+1G>A MCOLN1 Sep 20, 2015 MedGen:CN517202 not provided germline 19 7526607 TACCAGGCCATCTTCCATGCTGTGGACCAGGTGCTGGTGGGCGGGCAGGTGCTGGTGGGCA 886041906 264086 NM_005214.4(CTLA4):c.60G>A (p.Trp20Ter) CTLA4 Aug 02, 2016 MedGen:CN517202 not provided germline 2 203868002 GGCTCAGCTGAACCTGGCTACCAGGACCTGGCCCTGCACTCTCCTGTTTTTTCTTCTCTTC 1057519055 362057 NM_005215.3(DCC):c.2414G>A (p.Gly805Glu) DCC Jul 03, 2017 MedGen:C0175754,OMIM:217990,Orphanet:ORPHA200;MedGen:C1834870,OMIM:157600 Corpus callosum agenesis;Mirror movements 1 germline 18 53386097 CCCTAAAAGCTTTTAACAATGCCGGAGAAGGAGTTCCTCTTTATGAAAGTGCCACCACCAG 121908126 19485 NM_001031681.2(CTNS):c.506G>A (p.Gly169Asp) CTNS Nov 01, 1998 MedGen:C0010690,OMIM:219800 Nephropathic cystinosis germline 17 3656531 GCTTCGACTTCGTGGCTCTGAACCTGACGGGCTTCGTGGCCTACAGTGTATTCAACATCGG 267607510 77358 NM_002055.4(GFAP):c.209G>A (p.Arg70Gln) GFAP Jan 08, 2015 MedGen:C0270726,OMIM:203450,Orphanet:ORPHA58,SNOMED CT:81854007;MedGen:CN517202 Alexander's disease;not provided germline 17 44915278 CTGGCTTCAAGGAGACCCGGGCCAGTGAGCGGGCAGAGATGATGGAGCTCAATGACCGCTT 587776932 48302 NM_006218.3(PIK3CA):c.2740G>A (p.Gly914Arg) PIK3CA Jun 17, 2016 MedGen:C1865285,OMIM:602501;MedGen:CN517202 Megalencephaly cutis marmorata telangiectatica congenita;not provided de novo;germline;somatic 3 179230077 TACTGTGTAGCTACCTTCATTTTGGGAATTGGAGATCGTCACAATAGTAACATCATGGTGA 72555367 15979 NM_000404.3(GLB1):c.1313G>A (p.Gly438Glu) GLB1 Jul 01, 2000 MedGen:C0086652,OMIM:253010,Orphanet:ORPHA309310,SNOMED CT:238044004 Mucopolysaccharidosis, MPS-IV-B germline 3 33018482 ACCCAGCACCTCTCTCTTCACCCCTCAATGGAGTCCACGATCGAGCATATGTTGCTGTGGA 77010898 22168 NM_000492.3(CFTR):c.3846G>A (p.Trp1282Ter) CFTR Jul 11, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008;MedGen:C0238339,OMIM:167800,Orphanet:ORPHA676,SNOMED CT:68072000;MedGen:CN240590;MedGen:CN517202;MedGen:CN169374 Cystic fibrosis;Hereditary pancreatitis;ataluren response - Efficacy;not provided;not specified germline;unknown 7 117642566 GTCTTGGGATTCAATAACTTTGCAACAGTGGAGGAAAGCCTTTGGAGTGATACCACAGGTG 61755789 28208 NM_000322.4(PRPH2):c.500G>A (p.Gly167Asp) PRPH2 Mar 01, 1993 MedGen:C1868569,OMIM:169150,Orphanet:ORPHA63454;MedGen:CN517202 Patterned dystrophy of retinal pigment epithelium;not provided germline 6 42721835 ACATGCTGCAGATCGAGTTCAAATGCTGCGGCAACAACGGTTTTCGGGACTGGTTTGAGAT 72554322 103019 NM_000531.5(OTC):c.174G>A (p.Trp58Ter) OTC - MedGen:CN517202 not provided unknown X 38367387 TACCGGAGAAGAAATTAAATATATGCTATGGCTATCAGCAGATCTGAAATTTAGGATAAAA 587776576 18532 NM_024426.4(WT1):c.1432+5G>A WT1 Jun 26, 2017 MedGen:C0268747,OMIM:256370,SNOMED CT:111406002,SNOMED CT:236383002;MedGen:C0950121,OMIM:194080,Orphanet:ORPHA220,SNOMED CT:236385009;MedGen:C0950122,OMIM:136680,Orphanet:ORPHA347,SNOMED CT:445431000;MedGen:CN043611 Diffuse mesangial sclerosis;Drash syndrome;Frasier syndrome;Hereditary nephrotic syndrome germline 11 32391967 CACCAGGACTCATACAGGTAAAACAAGTGCGTAAACTTTTCTTCACATTTATTTTTCATTA 762550967 247477 NM_080916.2(DGUOK):c.130G>A (p.Glu44Lys) DGUOK Aug 18, 2016 MedGen:C4310733,OMIM:617070,Orphanet:ORPHA329314 Progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal recessive 4 germline 2 73927040 GCGGGGCGCGGGCCCCGAAGGCTCTCCATCGAAGGCAACATTGGTAAGGGCCGGAAAGCGG 765659555 424020 NM_000088.3(COL1A1):c.2641G>A (p.Gly881Ser) COL1A1 - MedGen:C0023931,OMIM:166200,SNOMED CT:385482004 Osteogenesis imperfecta type I unknown 17 50189705 CAGGGTGCTACTGGTTTCCCTGGTGCTGCTGGCCGAGTCGGTCCTCCTGGCCCCTCTGTAA 727504746 178267 NM_001692.3(ATP6V1B1):c.785+1G>A ATP6V1B1 Oct 11, 2013 MedGen:C0403554,OMIM:267300,SNOMED CT:236532003 Renal tubular acidosis with progressive nerve deafness germline 2 70961694 CCTCTTCCTGAACTTGGCCAATGACCCCACGTGAGCTTTCCCTGATGCCCAAACTGCCCTC 137853104 23668 NM_020547.3(AMHR2):c.1217G>A (p.Arg406Gln) AMHR2 Aug 15, 2009 MedGen:C3897940 Persistent mullerian duct syndrome, type II germline 12 53429907 TGGACCTACAGGATTGGGGCATGGCCCTCCGACGAGCTGATATTTACTCTTTGGCTCTGCT 771438170 214898 NM_000282.3(PCCA):c.2002G>A (p.Gly668Arg) PCCA Jan 01, 2014 Human Phenotype Ontology:HP:0003353,MedGen:C0268579,OMIM:606054,Orphanet:ORPHA35 Propionic acidemia germline 13 100515529 ACAAGCAGTGTTCTGCGTTCCCCGATGCCCGGAGTGGTGGTGGCCGTCTCTGTCAAGCCTG 587778933 95276 NM_000249.3(MLH1):c.1613G>A (p.Trp538Ter) MLH1 Aug 21, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0009405,Orphanet:ORPHA443090;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Hereditary cancer-predisposing syndrome;Hereditary nonpolyposis colon cancer;Lynch syndrome germline 3 37040240 ACTCCTTCGTGGGCTGTGTGAATCCTCAGTGGGCCTTGGCACAGCATCAAACCAAGTTATA 387906812 39159 NM_003073.4(SMARCB1):c.1130G>A (p.Arg377His) SMARCB1 Mar 18, 2012 MedGen:C3553248,OMIM:614608 Mental retardation, autosomal dominant 15 germline 22 23834152 CTCCCCACTCCTCTTCCAGGCGGATGAGGCGTCTTGCCAACACGGCCCCGGCCTGGTAACC 104886302 36121 NM_000495.4(COL4A5):c.4913G>A (p.Cys1638Tyr) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108695376 CCTTCATCGAATGTCATGGGAGGGGTACCTGTAACTACTATGCCAACTCCTACAGCTTTTG 879255689 247689 NM_012062.4(DNM1L):c.1048G>A (p.Gly350Arg) DNM1L Aug 25, 2016 MedGen:C3280660,OMIM:614388,Orphanet:ORPHA330050 Encephalopathy due to defective mitochondrial and peroxisomal fission 1 unknown 12 32722602 TTTGCCACAGAATATTGTAACACTATTGAAGGAACTGCAAAATATATTGAAACTTCGGAGC 80358242 19760 NM_015166.3(MLC1):c.176G>A (p.Gly59Glu) MLC1 Sep 22, 2016 MedGen:C1858854,OMIM:604004,Orphanet:ORPHA2478;MedGen:CN517202 Megalencephalic leukoencephalopathy with subcortical cysts 1;not provided germline;unknown 22 50084727 ACAAGACGTGGGTCTTCTCTGTGCTGATGGGGGTGAGTAGCTCCACACTAAGCCCTTGGAG 794727993 196414 NM_001098398.1(COPA):c.698G>A (p.Arg233His) COPA Jun 01, 2015 MedGen:C4225334,OMIM:616414,Orphanet:ORPHA444092 Autoimmune interstitial lung, joint, and kidney disease germline;inherited 1 160323439 GGGCAGATGATCGTCAAGTGAAGATCTGGCGCATGAATGGTGAGTGAACCGGTTACATTAT 121909264 23372 NM_000388.3(CASR):c.428G>A (p.Gly143Glu) CASR May 22, 2017 MedGen:C0342345,OMIM:601198;MedGen:C1809471,OMIM:145980,Orphanet:ORPHA93372,SNOMED CT:190868007;MedGen:C1809471,OMIM:145980,Orphanet:ORPHA93372,SNOMED CT:190868007;MedGen:CN517202 Hypocalcemia, autosomal dominant 1;Hypocalciuric hypercalcemia, familial, type 1;Hypocalciuric hypercalcemia, familial, type 1;not provided germline;unknown 3 122257323 AGCACATTCCCTCTACGATTGCTGTGGTGGGAGCAACTGGCTCAGGCGTCTCCACGGCAGT 79653797 19330 NM_000157.3(GBA):c.476G>A (p.Arg159Gln) GBA Feb 01, 2011 MedGen:C0017205,Orphanet:ORPHA355;MedGen:C1842704,OMIM:608013,Orphanet:ORPHA85212;MedGen:C1961835,OMIM:230800,SNOMED CT:62201009 Gaucher disease;Gaucher disease, perinatal lethal;Gaucher's disease, type 1 germline 1 155238629 TTTCTGTAGGAATCGGATATAACATCATCCGGGTACCCATGGCCAGCTGTGACTTCTCCAT 141498002 260132 NM_000303.2(PMM2):c.368G>A (p.Arg123Gln) PMM2 Jun 12, 2017 MedGen:C0349653,OMIM:212065,Orphanet:ORPHA79318,SNOMED CT:277893002;MedGen:CN517202 Carbohydrate-deficient glycoprotein syndrome type I;not provided germline;unknown 16 8811099 TCATTCCCAGGGGTACTTTCATTGAATTCCGAAATGGGATGTTAAACGTGTCCCCTATTGG 794729167 198556 NM_000116.4(TAZ):c.582G>A (p.Trp194Ter) TAZ May 31, 2012 MedGen:CN517202 not provided germline X 154419745 CATGAGTTCCGAATTCCTGCGTTTCAAGTGGGGTAAGGGCTGCTGGTCTCTGGCCACAGCC 796065306 171807 NM_183357.2(ADCY5):c.2176G>A (p.Ala726Thr) ADCY5 Aug 22, 2017 MedGen:C1847627,OMIM:606703,Orphanet:ORPHA324588;MedGen:CN517202 Dyskinesia, familial, with facial myokymia;not provided germline 3 123319754 GTGGATGAGTTTCTGGGCCGTGCCATTGACGCCAGGAGCATTGATAGGCTTCGGTCTGAGC 796052887 202968 NM_002693.2(POLG):c.2420G>A (p.Arg807His) POLG Jan 18, 2014 MedGen:CN517202 not provided germline 15 89322748 TGATTTCTTTCTGGAGGAACGCCCATAAACGTATCAGGTGGGCCACCATGGGAGGAGTCCT 527236097 152787 NM_000322.4(PRPH2):c.410G>A (p.Gly137Asp) PRPH2 - Human Phenotype Ontology:HP:0000547,MeSH:D012174,MedGen:C0035334,OMIM:268000,Orphanet:ORPHA791,SNOMED CT:28835009 Retinitis pigmentosa not provided 6 42721925 AGAACACCCTGGGCCAAGGGCTCAAGAACGGCATGAAGTACTACCGGGACACAGACACCCC 121918066 15115 NM_000374.4(UROD):c.995G>A (p.Arg332His) UROD Nov 01, 1998 MedGen:C0268323,OMIM:176100,SNOMED CT:59229005 Familial porphyria cutanea tarda germline 1 45015389 AGCAGATGCTGGATGACTTTGGACCACATCGCTACATTGCCAACCTGGGCCATGGGCTTTA 104893842 31069 NM_000406.2(GNRHR):c.416G>A (p.Arg139His) GNRHR Jun 21, 2017 Human Phenotype Ontology:HP:0000044,MedGen:C0271623,OMIM:146110,Orphanet:ORPHA181387,SNOMED CT:33927004;Human Phenotype Ontology:HP:0000044,MedGen:C0271623,OMIM:146110,Orphanet:ORPHA181387,SNOMED CT:33927004;MedGen:CN239347;MedGen:CN517202 Hypogonadotropic hypogonadism 7 with or without anosmia;Hypogonadotropic hypogonadism 7 with or without anosmia;Isolated GnRH Deficiency;not provided germline;inherited 4 67753920 CCTTCATGATGGTGGTGATCAGCCTGGACCGCTCCCTGGCTATCACGAGGCCCCTAGCTTT 121908614 21141 NM_004820.4(CYP7B1):c.169G>A (p.Gly57Arg) CYP7B1 Jan 01, 2009 MedGen:C1849115,OMIM:270800,Orphanet:ORPHA100986 Spastic paraplegia 5A germline 8 64624493 CCATTGATAAAAGGTTGGCTTCCTTATCTTGGAGTGGTCCTGAACTTACGAAAAGACCCCT 1057520486 365646 NM_001165963.1(SCN1A):c.2946+5G>A SCN1A Aug 10, 2015 MedGen:CN517202 not provided germline 2 166037771 TGGTCATGGTGATTGGAAACCTAGTGGTATGTACCCACTTAAGATATGCATTTTGGAAATA 56821304 22541 NM_002281.3(KRT81):c.1204G>A (p.Glu402Lys) KRT81 Jul 01, 1998 MedGen:C0546966,OMIM:158000,Orphanet:ORPHA573,SNOMED CT:69488000;MedGen:CN517202 Beaded hair;not provided germline 12 52287145 GTGATGAACTCCAAGCTGGGCCTGGACATCGAGATCGCCACCTACAGGCGCCTGCTGGAGG 587779643 107122 NM_000090.3(COL3A1):c.2022G>A (p.Lys674=) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188998718 TGCCGGTGCACCTGGAGCTCCAGGAGGCAAGGTAGTATTTCAATTTATTCTCTACCTTCTT 113828929 264978 NM_001849.3(COL6A2):c.2422+1G>A COL6A2 Jul 05, 2016 MedGen:CN517202 not provided germline 21 46126238 TCGATGACATGGAGGACGTCCTCTGCCCGGGTGAGCGTGTGGGCGCGGGGCAGTCGGCCGA 672601347 372611 NM_001845.5(COL4A1):c.2317G>A (p.Gly773Arg) COL4A1 Jun 14, 2017 MedGen:CN517202 not provided germline 13 110179298 CCAGGCGTTCCTGGAGAACATGGAGCGATCGGACCCCCTGGGCTTCAGGGGATCAGAGGTA 397515589 76692 NM_194248.2(OTOF):c.1841G>A (p.Gly614Glu) OTOF Apr 26, 2011 MedGen:C1832828,OMIM:601071 Deafness, autosomal recessive 9 not provided 2 26480274 CAGGTAAAATGGAAGAATTCTTTCTCTTTGGAGCCTTCCTGGAGGCCTCAATGATCGACCG 267607789 95830 NM_000249.3(MLH1):c.790+1G>A MLH1 Aug 10, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0009405,Orphanet:ORPHA443090;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Hereditary nonpolyposis colon cancer;Lynch syndrome;not provided germline 3 37014545 AGAAGTGCATCTTCTTACTCTTCATCAACCGTAAGTTAAAAAGAACCACATGGGAAATCCA 104894632 20315 NM_007215.3(POLG2):c.1352G>A (p.Gly451Glu) POLG2 Jun 01, 2006 MedGen:C1864668,OMIM:610131 Autosomal dominant progressive external ophthalmoplegia with mitochondrial DNA deletions 4 germline 17 64477929 TTTTGGTTACTGAAACTACTTTGGAGAATGGATTAATACATCTGAGAAGCAGAGACACCAC 587784337 169784 NM_003560.3(PLA2G6):c.1699G>A (p.Glu567Lys) PLA2G6 Feb 08, 2013 Human Phenotype Ontology:HP:0012675,MedGen:C4021076 Iron accumulation in brain germline 22 38120802 TCGGGGCCCCTGGAGGAGTTCCTGAAGCGGGAGTTTGGGGAGCACACCAAGATGACGGACG 606231251 166402 NM_022082.3(SLC17A9):c.932G>A (p.Arg311Gln) SLC17A9 Oct 01, 2014 MedGen:C4015128,OMIM:616063 Porokeratosis 8, disseminated superficial actinic type germline 20 62965153 CCCCTGTAGGTTACAGAGCCATCACGGTGCGGAAGCTCATGCAGGTAGGAGAATCATTCCG 866260675 247773 NM_002439.4(MSH3):c.2319-1G>A MSH3 Aug 31, 2016 MedGen:C4310719,OMIM:617100 Familial adenomatous polyposis 4 germline 5 80778719 TTTCCTATTTGTGTTCTTTCCCCTCTTCTAGCACAAAAGCTGTGAGCCGCTTTCACTCTCC 121909393 16353 NM_001174089.1(SLC4A11):c.1415G>A (p.Arg472Lys) SLC4A11 May 01, 2007 MedGen:C1857572,OMIM:217400,Orphanet:ORPHA1490 Corneal dystrophy and perceptive deafness germline 20 3230515 ACCTCAGCCTGGTCATGAGTCTCTTCAAGAGGTGACTGGCCCTTCCGTGAGCTGCTGGGAC 863225422 214739 NR_023343.1(RNU4ATAC):n.48G>A RNU4ATAC Nov 02, 2015 Gene:57788,MedGen:C1846059,OMIM:616651,Orphanet:ORPHA353298 Roifman syndrome germline 2 121530927 GGTTGCGCTACTGTCCAATGAGCGCATAGTGAGGGCAGTACTGCTAACGCCTGAACAACAC 121918055 28553 NM_002693.2(POLG):c.1532G>A (p.Ser511Asn) POLG Apr 01, 2007 MedGen:C1834846,OMIM:157640 Autosomal dominant progressive external ophthalmoplegia with mitochondrial DNA deletions 1 germline 15 89326965 AGAAGGTGAAGAAGGAACCAGCCACAGCCAGCAAGTTGCCCATCGAGGGGGCTGGGGCCCC 387906876 39356 NM_004281.3(BAG3):c.1430G>A (p.Arg477His) BAG3 Mar 11, 2011 MedGen:C3151293,OMIM:613881 Dilated cardiomyopathy 1HH germline 10 119676984 CAGTGGACCCCGAGGGACGAGCCGATGTGCGTCAGGCCAGGAGAGACGGTGTCAGGAAGGT 763036586 187054 NM_000071.2(CBS):c.1136G>A (p.Arg379Gln) CBS Aug 03, 2015 MedGen:C3150344,OMIM:236200;MedGen:CN517202 Homocystinuria due to CBS deficiency;not provided germline;unknown 21 43060450 GCTGCGTGGTCATTCTGCCCGACTCAGTGCGGAACTACATGTAAGACACGGCTTCCCTCCC 267607970 96202 NM_000251.2(MSH2):c.1662-1G>A MSH2 Dec 22, 2015 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:C0265325,OMIM:276300,Orphanet:ORPHA252202,SNOMED CT:61665008 Hereditary cancer-predisposing syndrome;Lynch syndrome;Turcot syndrome germline 2 47470964 TTTTTAATAAAACTGTTATTTCGATTTGCAGCAAATTGACTTCTTTAAATGAAGAGTATAC 72651645 414000 NM_000088.3(COL1A1):c.2155G>A (p.Gly719Ser) COL1A1 Mar 15, 2016 Human Phenotype Ontology:HP:0000703,MedGen:C0011436,Orphanet:ORPHA49042;MedGen:C0268362,OMIM:259420,Orphanet:ORPHA216812,SNOMED CT:385483009;Human Phenotype Ontology:HP:0002757,MedGen:C0016655 Dentinogenesis imperfecta;Osteogenesis imperfecta type III;Recurrent fractures germline;unknown 17 50191463 TAGGGTGATGCTGGTGCCCCTGGAGCTCCCGGTAGCCAGGGCGCCCCTGGCCTTCAGGGAA 886037683 421128 NM_177438.2(DICER1):c.2040+1G>A DICER1 Nov 03, 2015 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 14 95113091 ATTAACTCACCTCTTCGAGCCTCCATTGTTGTAAGTTTAGAAGAAGAAATGATTGTTATCT 397514703 65605 NM_021954.3(GJA3):c.5G>A (p.Gly2Asp) GJA3 Dec 01, 2011 MedGen:C1866078,OMIM:601885 Zonular pulverulent cataract 3 germline 13 20143284 CTCTTACAGGTTAGGAATCTGAAGCAATGGGCGACTGGAGCTTTCTGGGAAGACTCTTAGA -1 430678 NM_000252.2(MTM1):c.342+1G>A MTM1 May 25, 2017 MedGen:C0410203,OMIM:310400,Orphanet:ORPHA596,SNOMED CT:46804001 Severe X-linked myotubular myopathy germline X 150614700 AATTCCTATGGTCTAGATATTACTTGTAAAGTAAGAGATTCGATACTTTCTTATGCAAAGA 121965062 15315 NM_000934.3(SERPINF2):c.1231G>A (p.Val411Met) SERPINF2 Nov 01, 1999 MedGen:C2752081,OMIM:262850 Anti-plasmin deficiency, congenital germline 17 1754289 ATGTCCCGCATGTCCCTGTCCTCCTTCAGCGTGAACCGCCCCTTCCTCTTCTTCATCTTCG -1 433001 NM_000297.3(PKD2):c.2523-1G>A PKD2 Jan 11, 2017 MedGen:CN169374 not specified germline 4 88074811 TTTGTCCCTCTGTACTGTGTTTTCCTTGCAGCCTGGTGAGACGAGTGGACCGGATGGAGCA 1057516079 354029 NM_172107.3(KCNQ2):c.471G>A (p.Trp157Ter) KCNQ2 Mar 31, 2016 MedGen:C3150986,OMIM:613720,Orphanet:ORPHA439218 Early infantile epileptic encephalopathy 7 germline 20 63445281 CGCAGGCTGCTGCTGCCGGTACCGTGGCTGGAGGGGGCGGCTCAAGTTTGCCCGGAAACCG 863225164 214219 NM_023073.3(CPLANE1):c.2709G>A (p.Trp903Ter) CPLANE1 Feb 23, 2015 MedGen:C3553264,OMIM:614615 Joubert syndrome 17 unknown 5 37221361 TGATCAGCTAGCAAGAGAAATCCTGAGATGGTCCCAACTACCTGTAAAAGAAAATAAAGAT 727503035 176790 NM_000501.3(ELN):c.1918+1G>A ELN Aug 07, 2012 Human Phenotype Ontology:HP:0004381,MedGen:C0003499,OMIM:185500,Orphanet:ORPHA3193,SNOMED CT:268185002 Supravalvar aortic stenosis germline 7 74063370 CCAAAGCTGCTGCCAAAGCCGCCCAGTTTGGTGAGCACTGGGTGGAGGTGGGAGCTGCCGC 776095655 264004 NM_006516.2(SLC2A1):c.1199G>A (p.Arg400His) SLC2A1 Aug 24, 2016 MedGen:CN517202 not provided germline 1 42927684 TCGTGGCTGAACTCTTCAGCCAGGGTCCACGTCCAGCTGCCATTGCCGTTGCAGGCTTCTC 587779438 106870 NM_000090.3(COL3A1):c.2824G>A (p.Gly942Arg) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189004257 GATGAGCTAAGTCTTCATTATCTGTATTAGGGAGCTCCAGGCCCACTTGGGATTGCTGGGA 1057520700 380065 NM_000377.2(WAS):c.360+1G>A WAS Nov 18, 2016 MedGen:CN517202 not provided germline X 48685634 ACCCCCTTCTTCCACACCTTCGCTGGAGATGTAAGTGATCAACCAGCCCTCGGGCCTCACT 200273673 136327 NM_015713.4(RRM2B):c.122G>A (p.Arg41Gln) RRM2B Apr 17, 2014 MedGen:CN187502 RRM2B-related mitochondrial disease germline 8 102232231 AAGAGCCACTCCTAAGAAAGAGTTCTCGCCGGTTTGTCATCTTTCCAATCCAGTACCCTGA 201899866 481156 NM_001168357.1(PLA2G7):c.663+1G>A PLA2G7 Jan 24, 2018 MedGen:C1866472,OMIM:614278 Platelet-activating factor acetylhydrolase deficiency germline 6 46711495 GAGGAGGAGACACATATACGAAATGAGCAGGTACATTGCAGTGAAAGGAGAGGTGGTTGGT 1064793729 411251 NM_014927.4(CNKSR2):c.2145+1G>A CNKSR2 Jun 16, 2015 MedGen:CN517202 not provided germline X 21606880 CCATATGATACATACCCACGACCTCCCTCGGTAAGTTAGCAACAAGAACATTACTTATCAC 67394386 413983 NM_000088.3(COL1A1):c.3226G>A (p.Gly1076Ser) COL1A1 - MedGen:C0268362,OMIM:259420,Orphanet:ORPHA216812,SNOMED CT:385483009 Osteogenesis imperfecta type III unknown 17 50188131 TGCTCTCCCCAGGGTCCTGCTGGTCCCGCCGGTCCTGTCGGCCCTGTTGGCGCCCGTGGCC 137852647 24247 NM_002047.3(GARS):c.1660G>A (p.Asp554Asn) GARS Nov 01, 2014 MedGen:C1832274,OMIM:601472,Orphanet:ORPHA99938;MedGen:C1833308,OMIM:600794,Orphanet:ORPHA139536 Charcot-Marie-Tooth disease type 2D;Distal hereditary motor neuronopathy type 5 germline 7 30626280 ACTGAAGGGAAAACATTTCAGTTAACAAAAGACATGATCAATGTGAAGAGATTCCAGAAAA 767709505 203002 NM_002693.2(POLG):c.1716G>A (p.Trp572Ter) POLG Apr 16, 2014 MedGen:CN517202 not provided germline 15 89325683 CACTGCTGTCTTCCTGCTGGGACGTAGATGGTACCGGAAGCTCTGCCCCCGGCTAGACGAC 137852987 20006 NM_022437.2(ABCG8):c.1083G>A (p.Trp361Ter) ABCG8 May 09, 2016 MedGen:C0342907,OMIM:210250,Orphanet:ORPHA2882,SNOMED CT:238104009;MedGen:CN517202 Sitosterolemia;not provided germline 2 43872094 AAAAGTGCGTGACTTAGATGACTTTCTATGGAAAGCAGAGACGAAGGATCTTGACGAGGAC 121909284 23282 NM_000020.2(ACVRL1):c.1232G>A (p.Arg411Gln) ACVRL1 Sep 08, 2017 MedGen:C1838163,OMIM:600376;MedGen:C1832529;MedGen:CN517202;MedGen:CN169374 Hereditary hemorrhagic telangiectasia type 2;Pulmonary arterial hypertension related to hereditary hemorrhagic telangiectasia;not provided;not specified germline 12 51916219 TTGGCCTGGTGCTGTGGGAGATTGCCCGCCGGACCATCGTGAATGGTGAGGGCCCACCCTA 121912755 32819 NM_000342.3(SLC4A1):c.2279G>A (p.Arg760Gln) SLC4A1 Nov 01, 2005 MedGen:C2675212,OMIM:612653 Spherocytosis type 4 germline 17 44253150 CAGCCCAGATCCAGGAGGTCAAAGAGCAGCGGATCAGTGGACTCCTGGTCGCTGTGCTTGT 753614861 229258 NM_001369.2(DNAH5):c.6249G>A (p.Met2083Ile) DNAH5 May 03, 2017 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244 Ciliary dyskinesia germline 5 13830026 GAACCCTGAATTTGGGCTTTTCTTAACCATGGTAAGGAGCTGCTAGAAAAGCTACTGAATT 148032587 194820 NM_000303.2(PMM2):c.442G>A (p.Asp148Asn) PMM2 Sep 05, 2017 MedGen:C0349653,OMIM:212065,Orphanet:ORPHA79318,SNOMED CT:277893002;MedGen:CN517202 Carbohydrate-deficient glycoprotein syndrome type I;not provided germline;unknown 16 8811173 CAAGAAGAACGCATTGAGTTCTACGAACTCGATAAAGTACGTCTTTCTGAAATATCTTTGG 137854856 45768 NM_000428.2(LTBP2):c.3529G>A (p.Val1177Met) LTBP2 Aug 01, 2012 MedGen:C1869114,OMIM:277600;MedGen:C3553785,OMIM:614819 Weill-Marchesani syndrome 1;Weill-Marchesani syndrome 3 germline 14 74508727 ACACCCACTCCCCATCTTTTCCCTGCAGATGTGAATGAGTGCATGGGGGAGGAGCACTGCG -1 481461 NM_213649.1(SFXN4):c.414+1G>A SFXN4 Dec 13, 2017 MedGen:C3810001,OMIM:615578,Orphanet:ORPHA391348 Combined oxidative phosphorylation deficiency 18 germline 10 119158008 AAAGGGATCAAGTCCGTGATTTTACCTCAGGTAGCCATTCTTCCTGTTTCACGATTACTAA 137852350 25395 NM_007325.4(GRIA3):c.2497G>A (p.Gly833Arg) GRIA3 Nov 13, 2007 MedGen:C2678051,OMIM:300699,Orphanet:ORPHA364028 Mental retardation, X-linked, syndromic, wu type germline X 123482856 AATGTGGCAGGCGTTTTCTATATACTTGTCGGAGGTCTGGGGCTGGCCATGATGGTGGCTT 104894311 27474 NM_003282.3(TNNI2):c.521G>A (p.Arg174Gln) TNNI2 Feb 01, 2016 MedGen:C1834523,OMIM:601680,Orphanet:ORPHA1147;MedGen:CN517202 Distal arthrogryposis type 2B;not provided germline;somatic 11 1841523 ACATCGAGGAGAAGTCTGGCATGGAGGGCCGGAAGAAGATGTTTGAGTCCGAGTCCTAGGC 431825170 16984 NM_030957.3(ADAMTS10):c.1190+1G>A ADAMTS10 Nov 01, 2004 MedGen:C1869114,OMIM:277600 Weill-Marchesani syndrome 1 germline 19 8596306 GTTCACCATTGCCCACGAGATCGGGCACACGTGAGGCCAGGGCACACAAGAGGGGGAGGAG 118203952 15902 NM_013319.2(UBIAD1):c.556G>A (p.Gly186Arg) UBIAD1 Feb 01, 2008 Human Phenotype Ontology:HP:0007760,MedGen:C0271287,OMIM:121800,Orphanet:ORPHA98967,SNOMED CT:39662004,SNOMED CT:419395007 Schnyder crystalline corneal dystrophy germline 1 11285670 GCAGGAATTGGATTCAAGTACGTGGCTCTGGGAGACCTCATCATCCTCATCACTTTTGGCC 1131690950 420695 NM_000455.4(STK11):c.290+1G>A STK11 Jul 27, 2017 MedGen:C0027672,SNOMED CT:699346009;MeSH:D010580,MedGen:C0031269,OMIM:175200,Orphanet:ORPHA2869,SNOMED CT:54411001 Hereditary cancer-predisposing syndrome;Peutz-Jeghers syndrome germline 19 1207204 GATCCCCAACGGGGAGGCCAACGTGAAGAAGTAAGTATGGCTTGCTGGGGTCGGGGCCGGG 752135143 233909 NM_000051.3(ATM):c.331+5G>A ATM Jun 29, 2016 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0027672,SNOMED CT:699346009 Ataxia-telangiectasia syndrome;Hereditary cancer-predisposing syndrome germline;unknown 11 108229328 ATACTTCATCAAATGTGCAAACAGAAGTAAGTGATGTTATAAATTATAAATAAATGGCTTA 59977263 29638 NM_000422.2(KRT17):c.304G>A (p.Val102Met) KRT17 Mar 01, 2002 MedGen:C1721007,OMIM:167210;MedGen:CN517202 Pachyonychia congenita 2;not provided germline 17 41624206 AATGACCGCCTGGCCTCCTACCTGGACAAGGTGCGTGCCCTGGAGGAGGCCAACACTGAGC 1131690907 420508 NM_000321.2(RB1):c.264+1G>A RB1 May 16, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 13 48307407 GAGAAAGTTTCATCTGTGGATGGAGTATTGGTAAGGATTTTCTTAAAACGTTTTGAAATTT -1 362615 NM_031407.6(HUWE1):c.329G>A (p.Arg110Gln) HUWE1 Jan 18, 2017 MedGen:C2678046,OMIM:300706,Orphanet:ORPHA85328 Mental retardation, X-linked, syndromic, turner type de novo X 53647390 CAGCCTTGCTCATTGAGTACAGCTTTTCCCGGCATCTGTACAGTTCCATAGAGGTAGGGGA 780872661 485797 NM_000268.3(NF2):c.180G>A (p.Trp60Ter) NF2 Sep 29, 2016 MedGen:C0027832,OMIM:101000,Orphanet:ORPHA637,SNOMED CT:92503002 Neurofibromatosis, type 2 germline 22 29636816 GTGCCGGACTCTGGGGCTCCGAGAAACCTGGTTCTTTGGACTGCAGTACACAATCAAGGAC -1 442501 NM_001130144.2(LTBP3):c.1846+5G>A LTBP3 Jan 04, 2018 MedGen:CN696019,OMIM:617809 GELEOPHYSIC DYSPLASIA 3 germline 11 65547915 ACATCCCCAGCACCGCTACTGCGTGGGTGAGCGCAGGGCAGGCGGCGGGCATGCAGGTGGG 730880269 17960 NM_024077.4(SECISBP2):c.1212+29G>A SECISBP2 Nov 01, 2005 MedGen:C1864761,OMIM:609698,Orphanet:ORPHA171706 Thyroid hormone metabolism, abnormal germline 9 89338609 AAGTACATTTATATTTTTTATTCACATGGTGTGATATAATAAGTGGGTCTTTCTTAAAAGA 119489103 20458 NM_005456.3(MAPK8IP1):c.176G>A (p.Ser59Asn) MAPK8IP1 Mar 01, 2000 Human Phenotype Ontology:HP:0005978,MedGen:C0011860,OMIM:125853,Orphanet:ORPHA181376,SNOMED CT:44054006 Diabetes mellitus type 2 germline 11 45898159 TCTCGGAGATCACTGATGAGTGTGGCATCAGCTTACAGTGCAAAGACACCCTGTCCTTACG 121908320 19646 NM_020427.2(SLURP1):c.296G>A (p.Cys99Tyr) SLURP1 Mar 01, 2004 MedGen:C0025221,OMIM:248300,Orphanet:ORPHA87503,SNOMED CT:239069005 Acroerythrokeratoderma germline 8 142741159 ACCTGATCTTCTGCTGCTTCCGAGACCTCTGCAACTCGGAACTCTGAACCCAGGGCGGCAG 515726183 136330 NM_015713.4(RRM2B):c.208G>A (p.Asp70Asn) RRM2B Apr 17, 2014 MedGen:CN187502 RRM2B-related mitochondrial disease germline 8 102226031 AAATTTTTGAAAATCTTTTTATTCCAGGTCGACTTATCAAAGGATCTCCCTCACTGGAACA 797044485 172110 NM_170707.3(LMNA):c.667G>A (p.Glu223Lys) LMNA Jan 08, 2015 MedGen:C0033300,OMIM:176670,Orphanet:ORPHA740,SNOMED CT:238870004 Hutchinson-Gilford syndrome germline 1 156134832 CAGGAGCTGCGTGAGACCAAGCGCCGTCATGAGACCCGACTGGTGGAGATTGACAATGGGA 201859109 440665 NM_000092.4(COL4A4):c.1396G>A (p.Gly466Arg) COL4A4 Aug 31, 2016 MedGen:CN517202 not provided germline 2 227089931 ACAGTGATATACTGTAGTGTTGGGAACCCCGGACCACAAGGAATAAAAGGCAAAGTTGGTC 104886146 35800 NM_000495.4(COL4A5):c.1897G>A (p.Glu633Lys) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108598819 CCTGGTTTCGGCCCTCCAGGCCCAGTAGGTGAAAAAGGCATACAAGGTGTGGCAGGAAATC 121909085 22348 NM_004560.3(ROR2):c.2160G>A (p.Trp720Ter) ROR2 Aug 01, 2000 MedGen:C1849334,OMIM:268310,Orphanet:ORPHA1507 Robinow syndrome, autosomal recessive germline 9 91724334 GCTGCCTTGCCCCGATGACTGTCCCGCCTGGGTGTATGCCCTCATGATCGAGTGCTGGAAC 587779703 107213 NM_000090.3(COL3A1):c.3572G>A (p.Gly1191Asp) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189008970 CAGGGCAACCAGGCCCTCCTGGACCTCCTGGTGCCCCTGGTCCTTGCTGTGGTGGTGTTGG 1057524847 369673 NM_000089.3(COL1A2):c.407G>A (p.Gly136Asp) COL1A2 Jan 30, 2017 MedGen:CN517202 not provided germline 7 94404867 AGGGTCCTGCAGGTGCTCGTGGTCCAGCTGGCCCTCCTGGCAAGGCTGGTGAAGATGTAAG 587777575 150464 NM_022168.3(IFIH1):c.1354G>A (p.Ala452Thr) IFIH1 Jul 03, 2014 MedGen:C3888244,OMIM:615846 Aicardi-goutieres syndrome 7 germline 2 162281498 ATTGATGAATGTCATCACACCAACAAAGAAGCAGTGTATAATAACATCATGAGGCATTATT -1 431555 NC_000006.12:g.45512244G>A RUNX2 Aug 31, 2016 MedGen:C0008928,OMIM:119600,Orphanet:ORPHA1452,SNOMED CT:65976001 Cleidocranial dysostosis somatic 6 45512244 ATACTAAAGATTTTTCTTTTTCTTTTTCCCAGACCCCAGGCAGGCACAGTCTTCCCCGCCG 141242566 214430 NM_004366.5(CLCN2):c.1795G>A (p.Asp599Asn) CLCN2 Sep 09, 2015 MedGen:C3810242,OMIM:615651,Orphanet:ORPHA363540 Leukoencephalopathy with ataxia germline 3 184353722 CCCCATGTGGCCCTCAGCTGCACCTTCCGGGACCTGCGTTTGGCACTGCACAGGACCAAGG 28933392 28178 NM_000448.2(RAG1):c.2164G>A (p.Glu722Lys) RAG1 Oct 04, 1996 MedGen:C1867362 Severe combined immunodeficiency, B cell-negative germline 11 36575468 GAAAAACTTGTGCGGGAAGTGGAAGGCCTCGAGGCTTCTGGCTCAGTCTACATTTGTACTC 756880678 200697 NM_138361.5(LRSAM1):c.1913-1G>A LRSAM1 Apr 30, 2015 MedGen:C0007959,Orphanet:ORPHA166,SNOMED CT:50548001 Charcot-Marie-Tooth disease germline 9 127501009 CTGGCTCAGTCTGTCTGTCTGGTCCCCACAGAGCTGAAACCACCAATGGGTGAGGTCGTCA 267606849 19196 NM_000173.6(GP1BA):c.1620G>A (p.Trp540Ter) GP1BA Jul 01, 1997 MedGen:C3278148 Bernard-Soulier syndrome, type A1 germline 17 4934224 CCTGGGCTTCTATGTCTTGGGTCTCTTCTGGCTGCTCTTTGCCTCTGTGGTCCTCATCCTG 111033723 36549 NM_000155.3(GALT):c.564+1G>A GALT Dec 04, 2012 MedGen:C0268151,OMIM:230400,Orphanet:ORPHA79239,SNOMED CT:124354006 Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase not provided 9 34648172 GGCTGTTCTAACCCCCACCCCCACTGCCAGGTAAGGGTGTCAGGGGCTCCAGTGGGTTTCT 369651701 264042 NM_022356.3(P3H1):c.1569+1G>A P3H1 Apr 20, 2016 MedGen:CN517202 not provided germline 1 42752273 TATGGTGTCACTGTCTTCAAAGCCCTCAAGGTAAGATCAACACTGGGCATTCTAGAGTGTG 199469654 106393 NM_003590.4(CUL3):c.1207-1G>A CUL3 - Gene:7830,MedGen:C1449844,OMIM:145260,Orphanet:ORPHA757,SNOMED CT:15689008 Pseudohypoaldosteronism, type 2 germline 2 224503823 GTATAATTGTTACATCATCTTAATTTTGCAGCTAACAGAACAAGAAGTAGAAACAATATTG 886037652 94242 NM_001031725.5(DDX59):c.1600G>A (p.Gly534Arg) DDX59 Sep 05, 2013 MedGen:C1868118,OMIM:174300,Orphanet:ORPHA2919 Orofaciodigital syndrome 5 germline 1 200644514 GAAAATGTTCTTTGCATTTTATTTCAGATTGGAAGAGTAGGAAGATTAGGTCAAAATGGAA 104894640 20156 NM_000199.3(SGSH):c.1105G>A (p.Glu369Lys) SGSH Sep 03, 2015 MedGen:C0086647,OMIM:252900,Orphanet:ORPHA79269,SNOMED CT:41572006;MedGen:CN517202 Mucopolysaccharidosis, MPS-III-A;not provided germline 17 80210856 GCCACCGTCTTTGGCAGCCAGAGCCACCACGAGGTCACCATGTCCTACCCCATGCGCTCCG 61027685 77253 NM_000526.4(KRT14):c.397G>A (p.Val133Met) KRT14 Apr 04, 2015 MedGen:CN517202 not provided germline 17 41586438 AATGACCGCCTGGCCTCCTACCTGGACAAGGTGCGTGCTCTGGAGGAGGCCAACGCCGACC 267606723 68465 NM_000492.3(CFTR):c.3731G>A (p.Gly1244Glu) CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008;MedGen:CN236562 Cystic fibrosis;ivacaftor response - Efficacy germline 7 117642451 TCACTTTTACCTTATAGGTGGGCCTCTTGGGAAGAACTGGATCAGGGAAGAGTACTTTGTT 764813110 245298 NM_001039550.1(DNAJB2):c.620-1G>A DNAJB2 Aug 18, 2015 MedGen:C3553989,OMIM:614881,Orphanet:ORPHA314485 Spinal muscular atrophy, distal, autosomal recessive, 5 germline 2 219284631 TGGGGCCTCATGGTGGCTGTGACTCTTGCAGGTGTCCCAGATGACCTGGCACTGGGCTTGG 372054380 215758 NM_032730.5(RTN4IP1):c.308G>A (p.Arg103His) RTN4IP1 Nov 05, 2015 MedGen:C4225227,OMIM:616732 Optic atrophy 10 with or without ataxia, mental retardation, and seizures germline 6 106622936 GTTATGGAGCTACAGCTTTAAATATGAAGCGTGATCCTTTACACGTGAAAATCAAAGGAGA 587779463 106900 NM_000090.3(COL3A1):c.798+1G>A (p.Phe268Leufs*10) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188990361 CCTGGATTCCCTGGTATGAAAGGACACAGAGTAAGTAGAGTTTCTAAGTTGTTTACAAGGT 111033570 22389 NM_001099679.1(TRIM32):c.1459G>A (p.Asp487Asn) TRIM32 Mar 18, 2017 MedGen:C0752166,OMIM:209900,Orphanet:ORPHA110,SNOMED CT:5619004;Human Phenotype Ontology:HP:0003198,MedGen:C0026848;MedGen:C0270968,OMIM:254110,Orphanet:ORPHA1878,SNOMED CT:240064008,SNOMED CT:43226001 Bardet-Biedl syndrome;Myopathy;Sarcotubular myopathy germline;unknown 9 116699201 GCCTTGCCATCTGGCCAGTTTGTAGTAACCGATGTGGAAGGTGGAAAGCTTTGGTGTTTCA 267606766 31842 NM_001361.4(DHODH):c.454G>A (p.Gly152Arg) DHODH Jan 01, 2010 MedGen:C0265257,OMIM:263750,SNOMED CT:66038001 Miller syndrome germline 16 72017043 GTGCTCTGCAGGTATGGATTTAACAGTCACGGGCTTTCAGTGGTGGAACACAGGTTACGGG 28931584 32812 NM_000342.3(SLC4A1):c.1462G>A (p.Val488Met) SLC4A1 Sep 15, 2016 MedGen:C1969038,OMIM:611590,Orphanet:ORPHA93610;MedGen:C2675212,OMIM:612653 Renal tubular acidosis, distal, with hemolytic anemia;Spherocytosis type 4 germline;unknown 17 44257514 TTCTGCGAGACCAACGGTCTAGAGTACATCGTGGGCCGCGTGTGGATCGGCTTCTGGCTCA 199474822 24702 m.7444G>A MT-CO1;MT-TS1 Jul 03, 2014 MedGen:C1838854,OMIM:580000,Orphanet:ORPHA168609;MedGen:C3151897,OMIM:500008;Human Phenotype Ontology:HP:0001112,MedGen:C0917796,OMIM:535000,Orphanet:ORPHA104,SNOMED CT:58610003 Aminoglycoside-induced deafness;Deafness, nonsyndromic sensorineural, mitochondrial;Leber's optic atrophy germline MT 7444 CATTCGAAGAACCCGTATACATAAAATCTAGACAAAAAAGGAAGGAATCGAACCCCCCAAA 748860341 188162 NM_001131019.2(GFAP):c.1289G>A (p.Arg430His) GFAP Oct 21, 2016 MedGen:C0270726,OMIM:203450,Orphanet:ORPHA58,SNOMED CT:81854007;MedGen:CN517202 Alexander's disease;not provided germline 17 44910143 ACCAGATTGTAAATGGAACGCCGCCGGCTCGCGGTTAGCTGCCTGCCTCTCAGACACGGCG 1057519076 359090 NM_002250.2(KCNN4):c.844G>A (p.Val282Met) KCNN4 Dec 11, 2015 MedGen:C4225242,OMIM:616689 Dehydrated hereditary stomatocytosis 2 germline 19 43769805 CCACAGGGTGTCTGCTGCACAGCCCTGCTGGTGGCCGTGGTGGCCCGGAAGCTGGAGTTTA 72561723 32072 NM_004004.5(GJB2):c.134G>A (p.Gly45Glu) GJB2 May 09, 2017 MedGen:C2673759,OMIM:220290;MedGen:C2673759,OMIM:220290;MedGen:C2673759,OMIM:220290;MedGen:C1835678,OMIM:148210 Deafness, autosomal recessive 1A;Deafness, autosomal recessive 1A;Deafness, autosomal recessive 1A;Keratitis-ichthyosis-deafness syndrome, autosomal dominant germline;unknown 13 20189448 TCCTCGTTGTGGCTGCAAAGGAGGTGTGGGGAGATGAGCAGGCCGACTTTGTCTGCAACAC -1 433529 NM_000118.3(ENG):c.220-1G>A ENG Oct 07, 2016 MedGen:CN169374 not specified germline 9 127829828 ACTGTGTGTGTCTCTCCTCTGTGTCCCCCAGGGCCCGTCACAGCTGGAGCTGACTCTCCAG -1 214856 NM_016218.3(POLK):c.1341G>A (p.Gln447=) POLK Jun 25, 2014 Human Phenotype Ontology:HP:0012125,MedGen:C0376358,OMIM:176807,SNOMED CT:399068003 Malignant tumor of prostate somatic 5 75590425 ACTTTGCAGTGAGCTTGCTCAGGATCTACAGAAAGAAAGACTTAAGGTGCTTTATTTTGAT 727504275 176208 NM_000363.4(TNNI3):c.611G>A (p.Arg204His) TNNI3 Jun 26, 2017 Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Hypertrophic cardiomyopathy;Primary familial hypertrophic cardiomyopathy;not provided de novo;germline 19 55151856 ACATCGATGCACTGAGTGGAATGGAGGGCCGCAAGAAAAAGTTTGAGAGCTGAGCCTTCCT 121908759 44497 NM_000492.3(CFTR):c.1865G>A (p.Gly622Asp) CFTR Sep 01, 2016 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008;MedGen:C0238339,OMIM:167800,Orphanet:ORPHA676,SNOMED CT:68072000;MedGen:CN517202 Cystic fibrosis;Hereditary pancreatitis;not provided germline 7 117592032 AAGCTGACAAAATATTAATTTTGCATGAAGGTAGCAGCTATTTTTATGGGACATTTTCAGA 587777617 153683 NM_003239.4(TGFB3):c.899G>A (p.Arg300Gln) TGFB3 Dec 13, 2016 MedGen:C3553762,OMIM:614816;MedGen:C3810012,OMIM:615582;MedGen:CN517202 Loeys-Dietz syndrome 4;Loeys-Dietz syndrome 5;not provided germline 14 75963343 ACCCGGGCCAGGGGGGTCAGAGGAAGAAGCGGGCTTTGGACACCAATTACTGCTTCCGGTG 587777445 141324 NM_022168.3(IFIH1):c.2159G>A (p.Arg720Gln) IFIH1 May 01, 2014 MedGen:C3888244,OMIM:615846 Aicardi-goutieres syndrome 7 germline 2 162276832 AGCAATATACTAGGACTGAGGAATCAGCACGAGGAATAATCTTTACAAAAACACGACAGAG 267607744 221382 NM_000249.3(MLH1):c.381-1G>A MLH1 Sep 11, 2017 MedGen:C0009405,Orphanet:ORPHA443090;MedGen:CN517202 Hereditary nonpolyposis colon cancer;not provided germline 3 37006990 TGGATATTAATTTGTTATATTTTCTCATTAGAGCAAGTTACTCAGATGGAAAACTGAAAGC 11555217 34125 NM_001360.2(DHCR7):c.452G>A (p.Trp151Ter) DHCR7 Nov 08, 2017 Human Phenotype Ontology:HP:0004691,MedGen:C1861383;Human Phenotype Ontology:HP:0011451,MedGen:C4020749;Human Phenotype Ontology:HP:0010569,MedGen:C1849185;Human Phenotype Ontology:HP:0001518,MedGen:C0021288;MedGen:C0175694,OMIM:270400,Orphanet:ORPHA818,SNOMED CT:43929004;MedGen:CN517202 2-3 toe syndactyly;Congenital microcephaly;Elevated 7-dehydrocholesterol;Small for gestational age;Smith-Lemli-Opitz syndrome;not provided germline;maternal;paternal;unknown 11 71441401 ACAAGTATCAGATCAATGGCCTGCAAGCCTGGCTCCTCACGCACCTGCTCTGGTTTGCAAA 201133219 48239 NM_144577.3(CCDC114):c.1391+5G>A CCDC114 Feb 06, 2013 MedGen:C3540844,OMIM:615067 Ciliary dyskinesia, primary, 20 germline 19 48297995 GCCCCACTTCAGCCCCCTGACACTCTGTGAGGCGCAGGGCAGGAGGGACGCAGAGGGGACG 104893974 32988 NM_000416.2(IFNGR1):c.230G>A (p.Cys77Tyr) IFNGR1 May 01, 2000 MedGen:C0694566,OMIM:209950,SNOMED CT:240413000 Disseminated atypical mycobacterial infection germline 6 137206279 GTGTTAAGAATTCAGAATGGATTGATGCCTGCATCAATATTTCTCATCATTATTGTAATAT 281865492 47592 NM_004614.4(TK2):c.389G>A (p.Arg130Gln) TK2 Dec 06, 2012 MedGen:C3149750,OMIM:609560 Mitochondrial DNA depletion syndrome 2 not provided 16 66529054 TTTTTGTTTTCCTTTAGGTGTCATCTGTACGGTTGATGGAGAGGTCGATTCACAGCGCAAG 1114167378 413997 NM_000088.3(COL1A1):c.2343+1G>A COL1A1 - MedGen:C0023931,OMIM:166200,SNOMED CT:385482004 Osteogenesis imperfecta type I unknown 17 50190816 CCTGGCCCTGCTGGTGCCCCTGGTGACAAGGTGAGGTGGCCGCCTCCCCACCTTCTGCCCT 104886119 35765 NM_000495.4(COL4A5):c.1571G>A (p.Gly524Asp) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108597052 AAGGGGAAAAAGGACAAGCTGGTGCAACTGGTCCCAAAGGATTACCAGTAAGTTTTGAGTA 137852638 24298 NM_005518.3(HMGCS2):c.634G>A (p.Gly212Arg) HMGCS2 Sep 06, 2017 MedGen:C2751532,OMIM:605911,Orphanet:ORPHA35701;MedGen:CN517202 mitochondrial 3-hydroxy-3-methylglutaryl-CoA synthase deficiency;not provided germline 1 119759915 AGTGGTAATGCTCGTCCCACAGGTGGGGCCGGAGCTGTGGCTATGCTGATTGGGCCCAAGG 121434433 21900 NM_001287.5(CLCN7):c.2285G>A (p.Arg762Gln) CLCN7 Jan 26, 2001 MedGen:C1969106,OMIM:611490 Osteopetrosis autosomal recessive 4 germline 16 1447052 CGTCGCTCCCACGGGTGTTCAAGCTGTTCCGGGCCCTGGGCCTGCGGCACCTGGTGGTGGT 137853235 29988 NM_000601.5(HGF):c.495G>A (p.Ser165=) HGF Jul 01, 2009 MedGen:C1842342,OMIM:608265 Deafness, autosomal recessive 39 germline 7 81752250 TTATCATTTTAAAACTAGCTTTTTGCCTTCGAGCTATCGGGGTAAAGACCTACAGGAAAAC -1 432452 NM_001270.2(CHD1):c.1379G>A (p.Arg460Lys) CHD1 Sep 21, 2017 MedGen:CN482172,OMIM:617682 PILAROWSKI-BJORNSSON SYNDROME germline 5 98897307 GTTTATTTCTACTAAAGGTATTAAAACAAAGGCCAAGGTTTGTAGCCCTGAAGAAGCAGCC 267607588 447315 NM_170707.3(LMNA):c.936+1G>A LMNA Jun 28, 2017 MedGen:CN043576 Charcot-Marie-Tooth disease, type 2 germline 1 156135313 TCTGCCCAGCTCAGCCAGCTCCAGAAGCAGGTGATACCCCACCTCACCCCTCTCTCCAGGG 587779856 132883 NM_000051.3(ATM):c.6572+1G>A ATM Apr 13, 2016 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Ataxia-telangiectasia syndrome;Hereditary cancer-predisposing syndrome;not provided germline;unknown 11 108321421 GCTGGAAAGCATTGGGGAGCTTTTCTCAAGGTATGTAATTCGTATGACTTTGTTATCCTAA 397515354 19296 NM_000784.3(CYP27A1):c.844+1G>A CYP27A1 Aug 01, 2013 MedGen:C0238052,OMIM:213700,Orphanet:ORPHA909,SNOMED CT:63246000 Cholestanol storage disease germline 2 218812750 TGGATGGTTGGAATGCCATCTTTTCCTTTGGTGAGGACTCCCAGATGGGGCCCAGGGAAGA 794728594 196473 NM_170707.3(LMNA):c.871G>A (p.Glu291Lys) LMNA Apr 09, 2015 MedGen:CN517202 not provided germline 1 156135247 AACAGCAACCTGGTGGGGGCTGCCCACGAGGAGCTGCAGCAGTCGCGCATCCGCATCGACA 727504269 175196 NM_000256.3(MYBPC3):c.1090+1G>A MYBPC3 May 24, 2017 MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Primary familial hypertrophic cardiomyopathy;not provided germline 11 47346206 GCATGAGGCGCGATGAGAAGAAGAGCACAGGTTAGCCCTTCCTCAGAGGGGAGAGGAGAGG 137854434 27742 NM_003235.4(TG):c.7123G>A (p.Gly2375Arg) TG Apr 01, 2007 MedGen:C0342194,OMIM:274700,SNOMED CT:23536000 Iodotyrosyl coupling defect germline 8 133029907 TGGGTGCAGACCCACATCCGAGGATTTGGCGGGGACCCTCGGCGCGTGTCCCTGGCAGCAG -1 446627 NM_004006.2(DMD):c.6317G>A (p.Trp2106Ter) DMD Sep 13, 2017 MedGen:CN517202 not provided germline X 32217037 GCAGGCGATTTGACAGATCTGTTGAGAAATGGCGGCGTTTTCATTATGATATAAAGATATT 104894484 19118 NM_017882.2(CLN6):c.368G>A (p.Gly123Asp) CLN6 Feb 01, 2002 MedGen:C1866282,OMIM:601780,Orphanet:ORPHA228363 Ceroid lipofuscinosis neuronal 6 germline 15 68211793 CGTACGTGAGCATCATCATCTTCATCATGGGTGCCAGCATCCACCTGGTGGGTGACTCTGT 118203423 58242 NM_000368.4(TSC1):c.664-1G>A TSC1 Jan 28, 2016 MedGen:C0005684,OMIM:109800,Orphanet:ORPHA157980,SNOMED CT:399326009;MedGen:C1854465,OMIM:191100 Malignant tumor of urinary bladder;Tuberous sclerosis 1 germline 9 132921437 CCTTTATAATTTGTCAACCCAACTCTTCTAGCCAATGATGGAGCATGTGCGAATTCATCCG 28934604 16697 NM_000785.3(CYP27B1):c.320G>A (p.Arg107His) CYP27B1 Jun 14, 2016 MedGen:C0221468;MedGen:C0268689,OMIM:264700,Orphanet:ORPHA289157,SNOMED CT:67049004 Vitamin D-Dependent Rickets;Vitamin D-dependent rickets, type 1 germline 12 57766073 TGCTGCGACAGGAGGGACCCCGGCCCGAGCGCTGCAGCTTCTCGCCCTGGACGGAGCACCG 863225094 214099 NM_014225.5(PPP2R1A):c.773G>A (p.Arg258His) PPP2R1A Apr 26, 2017 MedGen:C4225352,OMIM:616362,Orphanet:ORPHA457284;MedGen:CN517202 Mental retardation, autosomal dominant 36;not provided germline 19 52213076 TGCGCCAGGCCGCTGAAGACAAGTCCTGGCGCGTCCGCTACATGGTGGCTGACAAGTTCAC 587779636 107114 NM_000090.3(COL3A1):c.2445+5G>A (p.Gly798_Pro815del) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189002356 GACCTGCTGGTTTCCCTGGTGCTCCTGTAAGTGTGAATATTTATACATACATGTCCCATAG 104894674 21869 NM_016941.3(DLL3):c.1154G>A (p.Gly385Asp) DLL3 Apr 01, 2000 MedGen:CN032975,OMIM:277300 Spondylocostal dysostosis 1, autosomal recessive germline 19 39507099 TGCGCTGCCGCTGCCGCGCCGGCTTCGCGGGTCCTCGCTGCGAGCACGACCTGGACGACTG 387906623 38652 NM_000138.4(FBN1):c.5284G>A (p.Gly1762Ser) FBN1 Jan 04, 2018 MedGen:C3280054,OMIM:614185;MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:CN517202 Geleophysic dysplasia 2;Marfan syndrome;not provided germline 15 48460258 AGGCCAGGCTTTGTCATCGACATTTATACCGGTTTACCCGTTGGTGAGTCATGACGGCATT 587779535 107015 NM_000090.3(COL3A1):c.1662+1G>A (p.Gly537_Pro554del) COL3A1 Jun 06, 2017 MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000;MedGen:CN118826,Orphanet:ORPHA91387;MedGen:CN517202 Ehlers-Danlos syndrome, type 4;Thoracic aortic aneurysm and aortic dissection;not provided germline 2 188996179 CCAGGAAGTGATGGGAAACCAGGGCCTCCCGTATGTACATTTTTAAAATCTCATTTTAAAA 121908333 19766 NM_007078.2(LDB3):c.690-4733G>A LDB3 May 09, 2017 MedGen:C1836155,OMIM:609452,Orphanet:ORPHA98912;MedGen:CN517202 Myofibrillar myopathy, ZASP-related;not provided germline 10 86687163 CCCATCGAGGTGAAGGGGCTGGGCGGCAAGGCCACCATCATCCATGCGCAGTACAACACGC 387907050 39873 NM_152722.4(HEPACAM):c.275G>A (p.Arg92Gln) HEPACAM Nov 03, 2011 MedGen:C3151355,OMIM:613925 Megalencephalic leukoencephalopathy with subcortical cysts 2a germline 11 124924880 CCATTGGCACAGAGGTCATCGGCACCCTGCGGCCTGACTATCGAGACCGTATCCGACTCTT 483353129 143216 NM_000192.3(TBX5):c.338G>A (p.Arg113Lys) TBX5 - MedGen:CN517202 not provided not provided 12 114399537 TCATGGACATTGTACCTGCCGACGATCACAGATACAAATTCGCAGATAATAAATGGTAGGC 786204873 187377 NM_000314.6(PTEN):c.801+1G>A PTEN Aug 23, 2017 MedGen:CN517202 not provided germline 10 87958020 TTCCACAAACAGAACAAGATGCTAAAAAAGGTTTGTACTTTACTTTCATTGGGAGAAATAT 72653790 426942 NM_001171.5(ABCC6):c.2329G>A (p.Asp777Asn) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16178884 GTATACAGAAAGGCAGCTGTGTACCTGCTGGATGACCCCCTGGCGGCCCTGGATGCCCACG -1 430981 NM_001377.2(DYNC2H1):c.1953G>A (p.Lys651=) DYNC2H1 Jun 01, 2017 MedGen:C0265275,Orphanet:ORPHA474,SNOMED CT:75049004;MedGen:C2751311,OMIM:613091,SNOMED CT:254051008 Jeune thoracic dystrophy;Short-rib thoracic dysplasia 3 with or without polydactyly maternal 11 103129005 ATCTGCCTTAGCATTTGAACAGATAATTAAGGTAAATGGGCTTTTAATTTTATTATAATTA 80187739 46188 NM_007294.3(BRCA1):c.5074G>A (p.Asp1692Asn) BRCA1 Aug 29, 2016 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline 17 43067608 GAAGAGACTACTCATGTTGTTATGAAAACAGGTATACCAAGAACCTTTACAGAATACCTTG 397508256 67993 NM_000492.3(CFTR):c.166G>A (p.Glu56Lys) CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline 7 117509035 TATTGGTCCCACTTTTTATTCTTTTGCAGAGAATGGGATAGAGAGCTGGCTTCAAAGAAAA -1 445229 NM_020529.2(NFKBIA):c.33G>A (p.Trp11Ter) NFKBIA Oct 23, 2017 MedGen:CN517202 not provided germline 14 35404612 GTTCCAGGCGGCCGAGCGCCCCCAGGAGTGGGCCATGGAGGGCCCCCGCGACGGGCTGAAG 797044571 188186 NM_002055.4(GFAP):c.232G>A (p.Asp78Asn) GFAP Jan 08, 2015 MedGen:C0270726,OMIM:203450,Orphanet:ORPHA58,SNOMED CT:81854007 Alexander's disease germline 17 44915255 AGTGAGCGGGCAGAGATGATGGAGCTCAATGACCGCTTTGCCAGCTACATCGAGAAGGTTC 398123195 98443 NM_000159.3(GCDH):c.636-1G>A GCDH Nov 01, 2012 MedGen:C0268595,OMIM:231670,Orphanet:ORPHA25,SNOMED CT:360416003,SNOMED CT:76175005 Glutaric aciduria, type 1 germline 19 12896204 TCAGACCCCTCACCGACTGTTCCATCCCCAGGATCACGAACTCGCCTATGGCCGATCTGTT 397507404 46720 NM_000059.3(BRCA2):c.8488-1G>A BRCA2 Jul 05, 2017 MedGen:C2675520,OMIM:612555;MedGen:C1838457,OMIM:605724,Orphanet:ORPHA319462;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 2;Fanconi anemia, complementation group D1;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline;maternal;unknown 13 32370955 CTTTTTTGGTGTGTGTAACACATTATTACAGTGGATGGAGAAGACATCATCTGGATTATAC 397514770 75623 NM_001172646.1(PLCB4):c.1078G>A (p.Asp360Asn) PLCB4 Mar 01, 2013 MedGen:C3553404,OMIM:614669 Auriculocondylar syndrome 2 germline 20 9387476 CTTCACTATATCCCTAGATGTGTTGAACTTGACTGCTGGGATGGAAAAGGTGAAGACCAAG 267607116 16421 NM_001142301.1(TMEM67):c.2218G>A (p.Gly740Ser) TMEM67 Jun 26, 2017 MedGen:C1853153,OMIM:610688;MedGen:C3150796,OMIM:613550 Joubert syndrome 6;Nephronophthisis 11 germline 8 93808861 ACTTTTCAGGAAAATTTGTGTAGCCAGAGAGGTTTGGTACCCAACACAGATGGTCAGACTT 104886339 35805 NM_000495.4(COL4A5):c.1948+1G>A COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108598871 CAGGAAATCCAGGCCAGCCAGGAATACCAGGTAAGTTTACTGTGTTTTGTTTTAAACTTGG 116840808 28040 NM_000996.2(RPL35A):c.97G>A (p.Val33Ile) RPL35A Jun 25, 2009 MedGen:C2675859,OMIM:612528 Diamond-Blackfan anemia 5 germline 3 197951244 GAGCACACAGCTCTTCTTAAAATTGAAGGTGTTTACGCCCGAGATGAAACAGAATTCTATT -1 433268 NM_000267.3(NF1):c.7907+1G>A NF1 Aug 10, 2016 MedGen:CN169374 not specified germline 17 31357370 TGTTGTGTTTCCCAAAGTCTTTCCTGTTGTGTAAGTATCTCCTTTTGATTTTAATTCACCT 121918162 16017 NM_032322.3(RNF135):c.857G>A (p.Arg286His) RNF135 Aug 01, 2007 MedGen:C3280095,OMIM:614192,Orphanet:ORPHA137634 Macrocephaly, macrosomia, facial dysmorphism syndrome germline 17 30998749 AGGATTCCCGTACAGTGACTGTGTCTCACCGCCCACAACCCTATCGCTGGAGCTGTGAGAG 746136135 187689 NM_002334.3(LRP4):c.3830G>A (p.Arg1277His) LRP4 Apr 27, 2015 MedGen:C4225377,OMIM:616304 Myasthenic syndrome, congenital, 17 germline 11 46875551 GGACTGACTGGCAGACTCGGAGCATCCACCGTGCTGACAAGGGTACTGGCAGCAATGTCAT 947230593 426801 NM_001171.5(ABCC6):c.4213G>A (p.Gly1405Ser) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16150768 CAGCTAATTGTCCCAATCGTTCCCAGCGTGGGCCAGAAACAGCTCCTGTGTCTGGCACGTG 80358116 69417 NM_007294.3(BRCA1):c.302-1G>A BRCA1 Oct 02, 2015 MedGen:C2676676,OMIM:604370 Breast-ovarian cancer, familial 1 germline 17 43104262 CAAACATAATGTTTTCCCTTGTATTTTACAGATGCAAACAGCTATAATTTTGCAAAAAAGG 1060502656 404541 NM_004006.2(DMD):c.6118-1G>A DMD Jan 24, 2017 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Duchenne muscular dystrophy germline X 32287702 TTTTTACTGTTTTAAAATTTTTATATTACAGAATATAAAAGATAGTCTACAACAAAGCTCA -1 428524 NM_000288.3(PEX7):c.357G>A (p.Trp119Ter) PEX7 Apr 22, 2016 MedGen:C1859133,OMIM:215100,Orphanet:ORPHA309789 Rhizomelic chondrodysplasia punctata type 1 germline 6 136845632 TCAATGTTTTTAGGTGTATAGTGTTGATTGGAGCCAAACCAGAGGTGAACAGCTTGTGGTG 80356529 20130 NM_015560.2(OPA1):c.1334G>A (p.Arg445His) OPA1 Apr 07, 2017 MedGen:C1852267,OMIM:125250,Orphanet:ORPHA1215;MedGen:C0338508,OMIM:165500,Orphanet:ORPHA98672,SNOMED CT:2065009;MedGen:C0751651,Orphanet:ORPHA68380;MedGen:CN517202 Autosomal dominant optic atrophy plus syndrome;Dominant hereditary optic atrophy;Mitochondrial diseases;not provided germline 3 193643996 TTTTTTCAGATGGATCTGTGGATGCTGAACGCAGTATTGTTACAGACTTGGTCAGTCAAAT 387906951 39570 NM_000017.3(ACADS):c.323G>A (p.Gly108Asp) ACADS Jun 01, 2010 MedGen:C0342783,OMIM:201470,Orphanet:ORPHA26792,SNOMED CT:124166007 Deficiency of butyryl-CoA dehydrogenase germline 12 120737098 ACGCCATCGCCATGGAGGAGATCAGCCGTGGCTGCGCCTCCACCGGAGTCATCATGAGTGT 104894604 17467 NM_153006.2(NAGS):c.971G>A (p.Trp324Ter) NAGS Jun 01, 2003 MedGen:C0268543,OMIM:237310,Orphanet:ORPHA927,SNOMED CT:57119000 Hyperammonemia, type III germline 17 44006584 CCGACCTGGACCTGGTGTGCAACGCCGAGTGGGTGAGCACAAAAGAACGGCAGCAGATGCG -1 434195 NM_000527.4(LDLR):c.132G>A (p.Trp44Ter) LDLR - MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11100287 CCAAGACGGGAAATGCATCTCCTACAAGTGGGTCTGCGATGGCAGCGCTGAGTGCCAGGAT 606231467 171279 NM_002529.3(NTRK1):c.1550G>A (p.Gly517Glu) NTRK1 Oct 31, 2014 MedGen:C0020074,OMIM:256800,Orphanet:ORPHA642,SNOMED CT:62985007 Hereditary insensitivity to pain with anhidrosis germline 1 156876128 GCCGGGACATCGTGCTCAAGTGGGAGCTGGGGGAGGGCGCCTTTGGGAAGGTCTTCCTTGC 863223414 210224 NM_000020.2(ACVRL1):c.200G>A (p.Arg67Gln) ACVRL1 Aug 04, 2017 MedGen:C1838163,OMIM:600376;MedGen:CN517202 Hereditary hemorrhagic telangiectasia type 2;not provided germline 12 51913237 GGGAGGAGGGGAGGCACCCCCAGGAACATCGGGGCTGCGGGAACTTGCACAGGGAGCTCTG 281874667 35750 NM_000495.4(COL4A5):c.1423G>A (p.Gly475Ser) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108591644 AAAGGACTCCAAGGAGAACAAGGAGTGAAAGGTTTGATCTCCAAACATATTCATTCCTTCA 387906403 23955 NM_003051.3(SLC16A1):c.-202G>A SLC16A1 Sep 01, 2007 MedGen:C1864902,OMIM:610021,Orphanet:ORPHA165991 Exercise-induced hyperinsulinemic hypoglycemia germline 1 112956192 AAGGCAGCCTCGCTGGCCCGGCCAGACAAAGTGGTGAGCTGCGACGTGACTGGCTAGCTGC 727503030 176785 NM_000501.3(ELN):c.1150+1G>A ELN Jun 14, 2017 Human Phenotype Ontology:HP:0004381,MedGen:C0003499,OMIM:185500,Orphanet:ORPHA3193,SNOMED CT:268185002;MedGen:CN517202 Supravalvar aortic stenosis;not provided germline 7 74054770 CTAAGGCAGCTGCAAAGGCAGCCAAATACGGTGAGTGCTATGCTGACAGCTCTGCCCCACC 387906545 31269 NM_000143.3(FH):c.793G>A (p.Ala265Thr) FH Mar 12, 2015 MedGen:C0342770,OMIM:606812,Orphanet:ORPHA24,SNOMED CT:237983002 Fumarase deficiency germline 1 241506114 GTAAAATATGCAATGACAAGAATAAAAGCTGCCATGCCAAGAATCTATGAGCTCGCAGCTG 199422295 47712 NM_198253.2(TERT):c.2045G>A (p.Gly682Asp) TERT May 10, 2012 MedGen:C1851970,OMIM:127550 Dyskeratosis congenita autosomal dominant not provided 5 1279376 GCCCCGGCCTCCTGGGCGCCTCTGTGCTGGGCCTGGACGATATCCACAGGGCCTGGCGCAC 1064793840 410890 NM_001848.2(COL6A1):c.815G>A (p.Gly272Asp) COL6A1 Jul 13, 2015 MedGen:CN517202 not provided germline 21 45989094 TGACCTGTTTTGTGTTCCAGGGAGAACGAGGCAAGCCGGGGCTCCCAGGAGAGAAGGGAGA 730881386 222132 NM_000051.3(ATM):c.8988-1G>A ATM Apr 11, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Ataxia-telangiectasia syndrome;Hereditary cancer-predisposing syndrome;not provided germline;unknown 11 108365324 CTCACTGAAACCTTTGTGTTTTTGTCCTTAGTGATATTGACCAGAGTTTCAACAAAGTAGC 767769359 364483 NM_021222.2(PRUNE1):c.383G>A (p.Arg128Gln) PRUNE1 Sep 19, 2017 Human Phenotype Ontology:HP:0012443,MedGen:C4021085;MedGen:CN243994,OMIM:617481;MedGen:CN517202 Abnormality of brain morphology;Neurodevelopmental disorder with microcephaly, hypotonia, and variable brain anomalies;not provided germline;inherited 1 151024658 AGGAGGCAGTAGCAGAGGTGCTAGACCATCGACCCATCGAGCCGAAACACTGCCCTCCCTG 587783577 169864 NM_178151.2(DCX):c.667G>A (p.Gly223Arg) DCX Jul 07, 2014 Human Phenotype Ontology:HP:0002282,MedGen:C0008519 Heterotopia germline X 111401028 GATATCACAGAAGCCATCAAACTGGAGACCGGGGTTGTCAAAAAACTCTACACTCTGGATG 796052653 203724 NM_172107.3(KCNQ2):c.1687G>A (p.Asp563Asn) KCNQ2 Dec 27, 2016 MedGen:C3150986,OMIM:613720,Orphanet:ORPHA439218;MedGen:CN517202 Early infantile epileptic encephalopathy 7;not provided de novo;germline 20 63413526 CGGAAGTTCAAGGAGAGCCTGCGGCCCTACGACGTGATGGACGTCATCGAGCAGTACTCAG 794728256 197628 NM_000138.4(FBN1):c.6752G>A (p.Cys2251Tyr) FBN1 Aug 13, 2014 MedGen:CN517202 not provided germline 15 48430790 ATTGTACATTTTTTACAGATGAGGATGAGTGTGAAGAGGGAAAACATGACTGTACTGAAAA 794728162 197817 NM_000138.4(FBN1):c.640G>A (p.Gly214Ser) FBN1 Jul 11, 2017 MedGen:CN229799;MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:CN118826,Orphanet:ORPHA91387 Marfan Syndrome/Loeys-Dietz Syndrome/Familial Thoracic Aortic Aneurysms and Dissections;Marfan syndrome;Thoracic aortic aneurysm and aortic dissection germline 15 48537707 TGCACAAAAACGCTCTGCTGTGCCACAGTCGGCCGAGCCTGGGGCCACCCCTGTGAGATGT -1 441652 NM_000161.2(GCH1):c.510-1G>A GCH1 Dec 22, 2016 MedGen:CN517202 not provided germline 14 54847131 TGATTAACTAAAACAATTCTTTCTTTTCTAGGATTGTAGAAATCTATAGTAGAAGACTACA 199469636 39475 NM_017415.2(KLHL3):c.1583G>A (p.Arg528His) KLHL3 Oct 01, 2014 MedGen:C3469605,OMIM:614495,Orphanet:ORPHA300525;Gene:7830,MedGen:C1449844,OMIM:145260,Orphanet:ORPHA757,SNOMED CT:15689008 Pseudohypoaldosteronism type 2D;Pseudohypoaldosteronism, type 2 germline 5 137628305 AGCAAGTGGCAGACATGAACATGTGCCGGCGCAACGCAGGTAATGACTGCTCTCTCCATCT 72558476 103266 NM_000531.5(OTC):c.976G>A (p.Glu326Lys) OTC - MedGen:CN517202 not provided unknown X 38411970 TTTTATTCTCCTCGATCACTAGTGTTCCCAGAGGCAGAAAACAGAAAGTGGACAATCATGG 267606838 33442 NM_000512.4(GALNS):c.1019G>A (p.Gly340Asp) GALNS Aug 01, 2010 MedGen:C0086651,OMIM:253000,Orphanet:ORPHA309297,SNOMED CT:7259005 Mucopolysaccharidosis, MPS-IV-A germline 16 88826822 GCCATGTGTTTCAGGTGAGCCACCAGCTGGGCAGCATCATGGACCTCTTCACCACCAGCCT 587779569 107026 NM_000090.3(COL3A1):c.1124G>A (p.Gly375Glu) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188993434 CTGGACAAAGAGGAGAACCTGGACCTCAGGGACACGCTGGTGCTCAAGGTCCTCCTGTAAG 863225045 213904 NM_002860.3(ALDH18A1):c.413G>A (p.Arg138Gln) ALDH18A1 Sep 03, 2015 MedGen:C4225268,OMIM:616603 Cutis laxa, autosomal dominant 3 germline 10 95637327 GCCATGAGATCCTTCTGTCTCAGAGCGTGCGGCAGGCCCTCCACTCGGGGCAGAACCAGCT 200614421 440179 NM_001080463.1(DYNC2H1):c.7967G>A (p.Arg2656His) DYNC2H1 Jun 01, 2017 MedGen:C0265275,Orphanet:ORPHA474,SNOMED CT:75049004 Jeune thoracic dystrophy paternal 11 103199355 TCCCTGGAGGTTCACTTCTATTAGCAGGACGCAGTGGTGTAGGTCGTCGGACCATCACTTC 199472921 78125 NM_000238.3(KCNH2):c.1681G>A (p.Ala561Thr) KCNH2 Jun 20, 2016 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MedGen:CN517202 Congenital long QT syndrome;not provided germline 7 150951712 TTCTTGCTCATGTGCACCTTTGCGCTCATCGCGCACTGGCTAGCCTGCATCTGGTACGCCA 80358029 131383 NM_007294.3(BRCA1):c.5407-1G>A BRCA1 Mar 23, 2016 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome germline 17 43047704 TTTGAATGCTCTTTCCTTCCTGGGGATCCAGGGTGTCCACCCAATTGTGGTTGTGCAGCCA 312262904 49419 NM_000095.2(COMP):c.2155G>A (p.Gly719Ser) COMP Feb 28, 2013 MedGen:C0410538,OMIM:177170,Orphanet:ORPHA750,SNOMED CT:22567005 Pseudoachondroplastic spondyloepiphyseal dysplasia syndrome not provided 19 18783126 AGCAACGTGGTCTTGGACACAACCATGCGGGGTGGCCGCCTGGGGGTCTTCTGCTTCTCCC 120074135 18010 NM_000271.4(NPC1):c.2848G>A (p.Val950Met) NPC1 Aug 01, 2016 MedGen:C3179455,OMIM:257220;MedGen:CN517202 Niemann-Pick disease type C1;not provided germline;unknown 18 23539418 TCGTCCTGGATCGACGATTATTTCGACTGGGTGAAGCCACAGTCGTCTTGCTGTCGAGTGG 121907955 18934 NM_000520.5(HEXA):c.1511G>A (p.Arg504His) HEXA Feb 12, 2016 MedGen:CN068769;MedGen:C0039373,OMIM:272800,Orphanet:ORPHA845,SNOMED CT:111385000 Gm2-gangliosidosis, juvenile;Tay-Sachs disease germline;unknown 15 72345461 CATTTGCCTATGAACGTTTGTCACACTTCCGCTGTGAATTGCTGAGGTAAGCAAGCTGTGG 138336847 264490 NM_000314.6(PTEN):c.634+5G>A PTEN Sep 19, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline 10 87952264 TCCAATGTTCAGTGGCGGAACTTGCAGTAAGTGCTTGAAATTCTCATCCTTCCATGTATTG 267607127 27471 NM_000363.4(TNNI3):c.607G>A (p.Gly203Ser) TNNI3 Aug 01, 1997 MedGen:C1860752,OMIM:613690 Familial hypertrophic cardiomyopathy 7 germline 19 55151860 AAGAACATCGATGCACTGAGTGGAATGGAGGGCCGCAAGAAAAAGTTTGAGAGCTGAGCCT 387907320 48459 NM_001080414.3(CCDC88C):c.5058+1G>A CCDC88C Dec 18, 2012 MedGen:C0020255,OMIM:236600,SNOMED CT:230745008 Hydrocephalus germline 14 91277921 GAGGAGAGCAACCGCAGCTCCCCCACCCATGTGAGTGATCCGGACACGGACTTGGCCCGTC 886044840 269483 NM_000252.2(MTM1):c.444+1G>A MTM1 Dec 16, 2015 MedGen:C0410203,OMIM:310400,Orphanet:ORPHA596,SNOMED CT:46804001 Severe X-linked myotubular myopathy germline X 150619140 AGATACGCGTTTCCCCTGGCTCACAGTCTGGTAAATTCCAGTGCTCTCCTCAGCGTGGGAA 121912580 23584 NM_005359.5(SMAD4):c.1157G>A (p.Gly386Asp) SMAD4 May 31, 2016 Human Phenotype Ontology:HP:0030078,MeSH:C538231,MedGen:C0152013;MedGen:C0007112;MedGen:C0278701;Human Phenotype Ontology:HP:0011459,MedGen:C0152018,Orphanet:ORPHA70482;MeSH:D015179,MedGen:CN236642;na;MedGen:C1832942,OMIM:175050;Human Phenotype Ontology:HP:0006725,MedGen:C0281361 Adenocarcinoma of lung;Adenocarcinoma of prostate;Adenocarcinoma of stomach;Carcinoma of esophagus;Colorectal Neoplasms;JP and JP/HHT;Juvenile polyposis/hereditary hemorrhagic telangiectasia syndrome;Pancreatic adenocarcinoma germline;somatic 18 51067036 TTTTCTTCCTAAGGTTGCACATAGGCAAAGGTGTGCAGTTGGAATGTAAAGGTGAAGGTGA 606231302 167936 NM_003051.3(SLC16A1):c.938G>A (p.Arg313Gln) SLC16A1 Nov 13, 2014 MedGen:C4016684 Monocarboxylate transporter 1 deficiency, autosomal dominant germline 1 112917468 CCATTCTGGCTTTTGTTGACATGGTAGCCCGACCATCTATGGGACTTGTAGCCAACACAAA 587784403 170157 NM_006306.3(SMC1A):c.1193G>A (p.Arg398Gln) SMC1A Feb 08, 2013 MedGen:C1802395,OMIM:300590,SNOMED CT:55016009 Congenital muscular hypertrophy-cerebral syndrome germline X 53411822 CCCTGGCCCAGGAGCTGGAGAAATTCAATCGAGACCAGAAAGCTGACCAGGACCGTCTGGA 121907901 18527 NM_024426.4(WT1):c.1301G>A (p.Arg434His) WT1 Feb 24, 2017 MedGen:C0950121,OMIM:194080,Orphanet:ORPHA220,SNOMED CT:236385009;MedGen:CN517202 Drash syndrome;not provided germline;unknown 11 32392704 ACTTCAAGGACTGTGAACGAAGGTTTTCTCGTTCAGACCAGCTCAAAAGACACCAAAGGAG -1 466633 NM_000267.3(NF1):c.4992G>A (p.Trp1664Ter) NF1 Jan 11, 2017 MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003 Neurofibromatosis, type 1 germline 17 31326039 CGCAGTCTATATCTATAACTGTAACTCCTGGGTCAGGGAGTACACCAAGTATCATGAGCGG 869312726 225902 NM_017671.4(FERMT1):c.958-1G>A FERMT1 Jan 07, 2016 MedGen:C0406557,OMIM:173650,SNOMED CT:238835001,SNOMED CT:238836000 Kindler's syndrome germline 20 6097034 AACATTTCTAAAACGTCTGTTTTCATTTTAGTACCACATTAGCAAACTGTCGTTGTCTGCT 886041431 264855 NM_152296.4(ATP1A3):c.2840G>A (p.Gly947Glu) ATP1A3 Dec 11, 2015 MedGen:CN517202 not provided germline 19 41967743 GTGCCTCCAGGAACAAGATCCTGATCTTCGGGCTGTTTGAGGAGACGGCCCTGGCTGCCTT 121909350 23432 NM_000557.4(GDF5):c.1133G>A (p.Arg378Gln) GDF5 Aug 15, 2008 MedGen:C1856738,OMIM:228900,Orphanet:ORPHA2639 Fibular hypoplasia and complex brachydactyly germline 20 35434282 CCGTGTATGAGTACCTGTTCAGCCAGCGGCGAAAACGGCGGGCCCCACTGGCCACTCGCCA 118204057 16561 NM_000237.2(LPL):c.644G>A (p.Gly215Glu) LPL Oct 20, 2017 MedGen:C0023817,OMIM:238600,Orphanet:ORPHA309015,SNOMED CT:238086005,SNOMED CT:275598004;MedGen:CN517202 Hyperlipoproteinemia, type I;not provided germline 8 19954222 TTGTAGACGTCTTACACACATTCACCAGAGGGTCCCCTGGTCGAAGCATTGGAATCCAGAA 886043634 271674 NM_000451.3(SHOX):c.440G>A (p.Arg147His) SHOX Apr 06, 2016 MedGen:C0265309,OMIM:127300;MedGen:C1845118,OMIM:300582,Orphanet:ORPHA314795 Leri Weill dyschondrosteosis;Short stature, idiopathic, X-linked germline X 634780 ACGAGACCCATTACCCCGACGCCTTCATGCGCGAGGAGCTCAGCCAGCGCCTGGGGCTCTC 765592794 207077 NM_018075.4(ANO10):c.337+1G>A ANO10 Jun 27, 2014 MedGen:C3150998,OMIM:613728,Orphanet:ORPHA284289 Spinocerebellar ataxia, autosomal recessive 10 germline 3 43600383 GAACCAGACAGAACTTCAAAGGTTTTGATGGTAAGCCCTAAGTTCTTTGTCTCTGTTAGAA 113993949 98525 NM_000202.7(IDS):c.253G>A (p.Ala85Thr) IDS Sep 05, 2012 MedGen:C0026705,OMIM:309900,SNOMED CT:70737009 Mucopolysaccharidosis, MPS-II germline;unknown X 149503477 GCTTCTGCTCCCTAACAGCAAGCAGTGTGCGCCCCGAGCCGCGTTTCTTTCCTCACTGGCA -1 486704 NM_002144.3(HOXB1):c.620G>A (p.Arg207His) HOXB1 Mar 06, 2018 MedGen:C3553625,OMIM:614744 Hereditary congenital facial paresis 3 germline 17 48529833 AGCCAGGCCTGGGCTCGCCCAGTGGCCTCCGCACCAACTTCACCACAAGGCAGCTGACAGA 66737144 103070 NM_000531.5(OTC):c.386+1G>A OTC - MedGen:CN517202 not provided unknown X 38381430 TGTGAATGAAAGTCTCACGGACACGGCCCGGTTTGTAAATATTTTCTTCTCTCCAAAGCTG 587777176 106799 NM_006767.3(LZTR1):c.264-13G>A LZTR1 Mar 04, 2014 MedGen:C3810283,OMIM:615670 Schwannomatosis 2 unknown 22 20985828 GTAGACCTGGCTAATGCCACCCTCTCTTCCGGCTGCCTTTCAGGAAGACCATGCTCAATGA 139770721 180483 NM_000051.3(ATM):c.6095G>A (p.Arg2032Lys) ATM Jul 12, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Ataxia-telangiectasia syndrome;Hereditary cancer-predisposing syndrome;not provided germline;unknown 11 108315911 GTGGAGGGAAGATGTTACAACCCATTACTAGGTAAATTGCATTTTTCTAAACAACGGTATA 1060499789 389237 NM_022124.5(CDH23):c.5749G>A (p.Glu1917Lys) CDH23 Jun 04, 2016 MedGen:C1832394,OMIM:601386 Deafness, autosomal recessive 12 germline 10 71785667 ATCGTCACTGTGAACCGGCCCCTGGACCGCGAGCGGATCCCAGAGTACAAGCTGACCATTT 775319351 426799 NM_001171.5(ABCC6):c.4241G>A (p.Arg1414His) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16150740 TGGGCCAGAAACAGCTCCTGTGTCTGGCACGTGCCCTTCTCCGGAAGACCCAGATCCTCAT 118204016 16673 NM_000018.3(ACADVL):c.1349G>A (p.Arg450His) ACADVL Apr 23, 2017 MedGen:C3887523,OMIM:201475,Orphanet:ORPHA26793,SNOMED CT:237996001,SNOMED CT:237997005 Very long chain acyl-CoA dehydrogenase deficiency germline 17 7223984 TGGCCCTGTGCTAGGAACCTGGAGTAGAGCGTGTGCTCCGAGATCTTCGCATCTTCCGGAT 137852932 19078 NM_021978.3(ST14):c.3G>A (p.Met1Ile) ST14 Jul 01, 2008 MedGen:C1865595,OMIM:602400 Ichthyosis, congenital, autosomal recessive 11 germline 11 130159982 GTGAGACCCGCGAGCGGCCTCGGGGACCATGGGGAGCGATCGGGCCCGCAAGGGCGGAGGG 104886150 35808 NM_000495.4(COL4A5):c.1957G>A (p.Gly653Arg) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108601401 ATTGATTTACTCTTGCTTTCAGGTCCTAAAGGGGATCCAGGTCAGACTATAACCCAGCCGG 387907210 40613 NM_005691.3(ABCC9):c.3128G>A (p.Cys1043Tyr) ABCC9 Jun 08, 2012 MedGen:C0795905,OMIM:239850,Orphanet:ORPHA1517 Hypertrichotic osteochondrodysplasia germline 12 21844884 CCTACTATGTGGCTGGCTTTAGCATACTCTGTGGAGCAGGCATTTTCCTTTGCCTTGTTAC 104894684 19273 NM_024301.4(FKRP):c.953G>A (p.Cys318Tyr) FKRP May 01, 2004 MedGen:C3150413,OMIM:613153 Congenital muscular dystrophy-dystroglycanopathy with brain and eye anomalies type A5 germline 19 46756403 TCTACGAGGAGCGCTGGACGCCCCCCTGCTGCCTGCGCGCGCTGCGCGAGACCGCCCGCTA 727503915 177691 NM_003494.3(DYSF):c.5525+1G>A DYSF Jan 23, 2014 MedGen:C1850889,OMIM:253601,Orphanet:ORPHA268;MedGen:C1850808,OMIM:254130,Orphanet:ORPHA45448 Limb-girdle muscular dystrophy, type 2B;Miyoshi muscular dystrophy 1 germline 2 71669208 GGAGAAGATGAGCGACATTTATGTGAAAGGGTAGGGAGCCAGCGTCCTCTTGCCTGTCCAG 754714105 230630 NM_001089.2(ABCA3):c.128G>A (p.Arg43His) ABCA3 Feb 26, 2015 MedGen:C3711368 Pulmonary Surfactant Metabolism Dysfunction germline 16 2326201 TGCTGTTTTCTGGGATCCTCATCTGGCTCCGCTTGAAGATTCAGTCGGAAAATGTGCCCAA 867092741 433161 NM_000296.3(PKD1):c.11710-1G>A PKD1 Mar 16, 2017 MedGen:CN517202;MedGen:CN169374 not provided;not specified germline 16 2091175 CCTCCCGCCCTCCTGACCGCGCCCCCCACAGGTGTGCCTGCTGCTGTTCGCCGTGCACTTC 104894326 32869 NM_000486.5(AQP2):c.190G>A (p.Gly64Arg) AQP2 Mar 17, 2017 MedGen:C4015884;MedGen:CN517202 Diabetes insipidus, nephrogenic, autosomal recessive;not provided germline 12 49951020 ACCCTGGTACAGGCTCTGGGCCACATAAGCGGGGCCCACATCAACCCTGCCGTGACTGTGG 869312732 226063 NM_030657.3(LIM2):c.587G>A (p.Gly196Glu) LIM2 Mar 10, 2016 MedGen:C3809004,OMIM:615277 Cataract 19, multiple types germline 19 51380262 GGGGGTGAATTTGAACTTCTTCTCATGCAGGGATTTTCTACATGTGCGCCTACCGGGTGCA 886039694 259715 NM_000393.4(COL5A2):c.2627G>A (p.Gly876Glu) COL5A2 Aug 30, 2016 MedGen:CN517202 not provided germline 2 189052945 CAGGACAGAAGGGAGATGCTGGTTCTCCTGGACCACAAGGTTTAGCAGGATCCCCTGGCCC 1064797099 413212 NM_003620.3(PPM1D):c.1281G>A (p.Trp427Ter) PPM1D May 03, 2017 MedGen:CN243957,OMIM:617450 Intellectual developmental disorder with gastrointestinal difficulties and high pain threshold germline 17 60663015 TATTTTTCAGTCACTGGAGGAGGATCCATGGCCAAGGGTGAATTCTAAGGACCATATACCT 587777156 106639 NM_002601.3(PDE6D):c.140-1G>A PDE6D Jan 01, 2014 MedGen:C3810278,OMIM:615665 Joubert syndrome 22 germline 2 231738139 AAGGCTTCAACATTTGTTTTTCTCTTACCAGCCCGTGTTCCCAAGAAAATCCTCAAGTGCA 886041028 17208 NM_007214.4(SEC63):c.733+1G>A SEC63 Jun 01, 2004 MedGen:C4310769,OMIM:617004 Polycystic liver disease 2 germline 6 107908926 TTTATAAAACCCGAAATATGGATATGAAACGTAAGTAAACTTTAAGTAACTTTGCTATTAA 797045211 207844 NM_000352.4(ABCC8):c.4119+1G>A ABCC8 Jul 29, 2015 MedGen:C1257959,OMIM:256450,SNOMED CT:360339005 Persistent hyperinsulinemic hypoglycemia of infancy germline 11 17396915 GTCAATGCCCTCATCGCCCCTGGACAGAAGGTCAGAGCACGGGCCCAACCCAATGCTGCAG 746738473 359152 NM_020810.3(TRMT5):c.872G>A (p.Arg291His) TRMT5 Dec 27, 2017 MedGen:C4225290,OMIM:616539,Orphanet:ORPHA477684 Combined oxidative phosphorylation deficiency 26 germline 14 60976047 GGAATCCTCGTCTGTCTACAGAACACAGCCGTATCACAGAACTTCTCAAACCTGGGGATGT 137854555 15389 NM_000267.3(NF1):c.4614G>A (p.Trp1538Ter) NF1 Jun 12, 1997 Human Phenotype Ontology:HP:0012209,MedGen:C0349639,OMIM:607785,Orphanet:ORPHA86834 Juvenile myelomonocytic leukemia germline 17 31261810 AGAGCACAAACCTGTGGCAGATACACACTGGTCCAGCCTTAACCTTACCAGTTCAAAGTTT 180177177 200447 NM_000030.2(AGXT):c.166-1G>A AGXT Nov 27, 2014 MedGen:C0268164,OMIM:259900,Orphanet:ORPHA93598,SNOMED CT:65520001 Primary hyperoxaluria, type I germline 2 240869169 CTGGGTCTCACCCTATACCACCCGCATGCAGATCATGGACGAGATCAAGGAAGGCATCCAG 879254086 245117 NM_001005360.2(DNM2):c.1678G>A (p.Glu560Lys) DNM2 Nov 18, 2015 MedGen:CN517202 not provided germline 19 10819986 TGACTCTTTTCCCTCCACCCTCAGGAGAAAGAGAAGAAGTACATGCTGCCTCTGGACAACC 730880701 179219 NM_000256.3(MYBPC3):c.3021G>A (p.Trp1007Ter) MYBPC3 Oct 16, 2014 MedGen:CN517202 not provided germline 11 47333726 TCAGGGCAAGCCCCGGCCTCAGGTGACCTGGACCAAAGAGGGGCAGCCCCTGGCAGGCGAG 119103270 17290 NM_000265.5(NCF1):c.125G>A (p.Arg42Gln) NCF1 Jul 01, 2001 MedGen:C1856251,OMIM:233700 Chronic granulomatous disease, autosomal recessive cytochrome b-positive, type 1 germline 7 74777319 GGCAGGACCTGTCGGAGAAGGTGGTCTACCGGCGCTTCACCGAGATCTACGAGTTCCATGT 121964856 27448 NM_001001430.2(TNNT2):c.275G>A (p.Arg92Gln) TNNT2 Jun 19, 2017 MedGen:C1861864,OMIM:115195;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Familial hypertrophic cardiomyopathy 2;Primary familial hypertrophic cardiomyopathy;not provided germline 1 201365297 CCGCAGCGGTCCACCCACAGGACATCCACCGGAAGCGCATGGAGAAGGACCTGAATGAGTT 104893764 28652 NM_001122757.2(POU1F1):c.766G>A (p.Glu256Lys) POU1F1 Aug 01, 2005 MedGen:C2751608,OMIM:613038 Pituitary hormone deficiency, combined 1 germline 3 87260082 CCCGCCAGCATTGCTGCTAAAGATGCTCTGGAGAGACACTTTGGAGAACAGAATAAACCTT -1 431632 NM_000350.2(ABCA4):c.1497G>A (p.Trp499Ter) ABCA4 Apr 20, 2017 MedGen:C1858806,OMIM:604116;Human Phenotype Ontology:HP:0000556,MedGen:C0854723,Orphanet:ORPHA71862,SNOMED CT:314407005 Cone-rod dystrophy 3;Retinal dystrophy germline;unknown 1 94077747 CCAGGCTGACGACATGGCCAACTTCGACTGGAGGGACATATTTAACATCACTGATCGCACC 864321659 26386 NM_000061.2(BTK):c.1750+5G>A BTK Jun 13, 1994 MedGen:C0472813,OMIM:307200,Orphanet:ORPHA632,SNOMED CT:234533006 X-linked agammaglobulinemia with growth hormone deficiency germline X 101353865 CAGCAAATCTGACATTTGGGCTTTTGGTAAGTGGATAAGATTACACAGATTATACAGCTCA 886039241 259325 NM_017583.5(TRIM44):c.463G>A (p.Gly155Arg) TRIM44 Oct 03, 2016 MedGen:C4310695,OMIM:617142 Aniridia 3 germline 11 35663574 AACCAAGAAGAAGGGGAATCCGAGGCGGAGGGAGAAACTGAGGCAGAAAGTGAATTTGACC 879255629 247503 NM_145861.2(EDARADD):c.367G>A (p.Asp123Asn) EDARADD Aug 09, 2016 na ECTODERMAL DYSPLASIA 11B, HYPOHIDROTIC/HAIR/TOOTH TYPE, AUTOSOMAL DOMINANT germline 1 236482368 AGTGACTTGCTCAATGATCAGGACTTACTAGACGTGATCAGGATAAAGCTGGATCCGTGTC 121918392 32888 NM_000041.3(APOE):c.61G>A (p.Glu21Lys) APOE Aug 01, 1995 na HYPERLIPOPROTEINEMIA, TYPE III, AND ATHEROSCLEROSIS ASSOCIATED WITH APOE5 germline 19 44907777 TTGTTCCACACAGGATGCCAGGCCAAGGTGGAGCAAGCGGTGGAGACAGAGCCGGAGCCCG 1085307187 414116 NM_001204.6(BMPR2):c.247G>A (p.Gly83Arg) BMPR2 - MedGen:C0152171,OMIM:178600,SNOMED CT:26174007 Primary pulmonary hypertension germline 2 202464979 TCAAAAGGGGACATAAATCTTGTAAAACAAGGCAAGTGATACTTTCCTTACCTGAAATGAC 121912846 32492 NM_000094.3(COL7A1):c.6110G>A (p.Gly2037Glu) COL7A1 Mar 02, 2016 MedGen:C0432322,OMIM:131750,Orphanet:ORPHA231568;MedGen:CN517202 Generalized dominant dystrophic epidermolysis bullosa;not provided germline 3 48575409 CCGGGCCTTCCGGCCTTGCCGGGGAGCCTGGAAAGCCTGGTATTCCCGGGCTCCCAGGCAG 886041558 264681 NM_003482.3(KMT2D):c.16184G>A (p.Trp5395Ter) KMT2D Feb 28, 2016 MedGen:CN517202 not provided germline 12 49022744 CATCTCAGTACCGGCGGCTGCGCACCGAATGGAAGAACAACGTGTACCTGGCTCGCTCCCG 869025183 26732 NM_004484.3(GPC3):c.337+1G>A GPC3 Oct 15, 2005 MedGen:C0796154,OMIM:312870,Orphanet:ORPHA373,SNOMED CT:439143004 Simpson-Golabi-Behmel syndrome germline X 133953049 TAATTATTCAGAATGCTGCGGTTTTCCAAGGTGAGTTCTGGGGATTATTTTAGATGTGCTG 28933979 28456 NM_000371.3(TTR):c.148G>A (p.Val50Met) TTR Jul 12, 2017 MedGen:C2751492,OMIM:105210,SNOMED CT:43532007,SNOMED CT:442012008;MedGen:CN517202 Amyloidogenic transthyretin amyloidosis;not provided germline 18 31592974 GTCCGAGGCAGTCCTGCCATCAATGTGGCCGTGCATGTGTTCAGAAAGGCTGCTGATGACA 200336777 24714 m.15812G>A MT-CYB Jan 01, 1992 Human Phenotype Ontology:HP:0001112,MedGen:C0917796,OMIM:535000,Orphanet:ORPHA104,SNOMED CT:58610003 Leber's optic atrophy germline MT 15812 CCTTTTACCATCATTGGACAAGTAGCATCCGTACTATACTTCACAACAATCCTAATCCTAA 869312671 225818 NM_004958.3(MTOR):c.4785G>A (p.Met1595Ile) MTOR Sep 04, 2015 MedGen:C4225259,OMIM:616638,Orphanet:ORPHA457485 Smith-Kingsmore syndrome de novo 1 11144735 CTTCCATCAGGCCATGGTTTCTTGCCACATGCTGTCCGAGCTGGAGGAGGTTATCCAGTAC 267607261 46911 NM_002437.4(MPV17):c.206G>A (p.Trp69Ter) MPV17 May 17, 2012 MedGen:C1850406,OMIM:256810,Orphanet:ORPHA255229 Navajo neurohepatopathy not provided 2 27312753 TTTACTTCCAGGGCCCTGTGGTAGGAGGCTGGTACAAGGTTTTGGATCGGTTCATCCCTGG 397517147 49139 NM_005633.3(SOS1):c.1297G>A (p.Glu433Lys) SOS1 Feb 28, 2017 MeSH:D009634,MedGen:C0028326,Orphanet:ORPHA648,SNOMED CT:205824006;MedGen:CN166718,Orphanet:ORPHA98733;MedGen:CN517202 Noonan syndrome;Rasopathy;not provided germline 2 39023131 AACGAGATTCAGAAGAATATTGATGGTTGGGAGGGAAAAGACATTGGACAGTGTTGTAATG -1 446801 NM_000390.3(CHM):c.1771-1G>A CHM Dec 17, 2015 MedGen:CN517202 not provided germline X 85864822 AAAACGATTTTATCTTTTCTTCCTTGGCCAGGCTGAAACACTTTTCCAGGAAATCTGCCCC 121909089 22318 NM_001005360.2(DNM2):c.1106G>A (p.Arg369Gln) DNM2 Feb 08, 2013 MedGen:CN221282;MedGen:C1834558,OMIM:160150,Orphanet:ORPHA169189 Myopathy, centronuclear;Myopathy, centronuclear, 1 germline 19 10793833 GCGCCCGAATCAATCGCATCTTCCACGAGCGGTTCCCATTTGAGCTGGTGAAGGTAGTGCC 137852569 24852 NM_000044.4(AR):c.1789G>A (p.Ala597Thr) AR Jun 01, 1992 MedGen:C0268301,OMIM:312300,Orphanet:ORPHA90797,SNOMED CT:58672003 Partial androgen insensitivity syndrome germline X 67686030 GTTCTCCCAGGGAAACAGAAGTACCTGTGCGCCAGCAGAAATGATTGCACTATTGATAAAT -1 446531 NM_005629.3(SLC6A8):c.1254+1G>A SLC6A8 Oct 31, 2017 MedGen:CN517202 not provided germline X 153694018 ATGCTGTTGCTGCTTGGTCTCGACAGCCAGGTTTGCATGGGGCTCTGGGACAGGGAGCCAG 786204597 227135 NM_004004.5(GJB2):c.598G>A (p.Gly200Arg) GJB2 Apr 01, 2016 MedGen:C2675750,OMIM:601544;MedGen:C2673759,OMIM:220290 Deafness, autosomal dominant 3a;Deafness, autosomal recessive 1A inherited;unknown 13 20188984 GTCTTCACAGTGTTCATGATTGCAGTGTCTGGAATTTGCATCCTGCTGAATGTCACTGAAT 1060499534 224778 NM_001257988.1(TYMP):c.1159G>A (p.Gly387Ser) TYMP Jan 14, 2016 MedGen:C0872218,OMIM:603041,Orphanet:ORPHA298 Mitochondrial DNA depletion syndrome 1 (MNGIE type) germline 22 50526246 GAGCAGGAGGAGCTGCTGGCGCCCGCAGATGGTGAGCGTCGGGGGAGTCCCCGTCCTTCCG 727503271 175502 NM_000257.3(MYH7):c.1012G>A (p.Val338Met) MYH7 Nov 20, 2014 MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Primary familial hypertrophic cardiomyopathy;not provided germline 14 23429901 TATGGGGCCTCCCTACAGAACGCTTTTGATGTGCTGGGCTTCACTTCAGAGGAGAAAAACT 797045017 205039 NM_022406.3(XRCC4):c.482G>A (p.Arg161Gln) XRCC4 Jul 01, 2015 MedGen:C4225288,OMIM:616541 Short stature, microcephaly, and endocrine dysfunction germline 5 83195936 TTCTGAGAGATTGGAATGATGTTCAAGGACGGTGTGTACACAGTTTGCTTGTGGTATAAAA 28934274 15967 NM_000404.3(GLB1):c.367G>A (p.Gly123Arg) GLB1 Apr 20, 2016 MedGen:C0268271,OMIM:230500,Orphanet:ORPHA79255,SNOMED CT:238026007;MedGen:C0268271,OMIM:230500,Orphanet:ORPHA79255,SNOMED CT:238026007;MedGen:CN517202 Infantile GM1 gangliosidosis;Infantile GM1 gangliosidosis;not provided germline 3 33068849 GAGCTGGGACTGCTGGTTATCCTGAGGCCCGGGCCCTACATCTGTGCAGAGTGGGAAATGG 535486098 169788 NM_003560.3(PLA2G6):c.1613G>A (p.Arg538His) PLA2G6 May 21, 2015 Human Phenotype Ontology:HP:0012675,MedGen:C4021076;MedGen:CN517202 Iron accumulation in brain;not provided germline 22 38120888 TGTTCCTAGGTAAGTCCATGGCCTACATGCGCGGCATGTACTTTCGCATGAAGGATGAGGT 150885084 264312 NM_000083.2(CLCN1):c.854G>A (p.Gly285Glu) CLCN1 Oct 18, 2016 MedGen:C0751360,OMIM:255700,SNOMED CT:20305008;MedGen:CN517202 Congenital myotonia, autosomal recessive form;not provided germline 7 143330772 GCCCCCAACCACACTTCTGTGCCCCTGCAGGAGTGCTATTTAGCATCGAGGTCACCTCCAC 386834057 71270 NM_017890.4(VPS13B):c.10946G>A (p.Trp3649Ter) VPS13B Dec 08, 2016 MedGen:C0265223,OMIM:216550,Orphanet:ORPHA193,SNOMED CT:56604005;MedGen:CN517202 Cohen syndrome;not provided germline 8 99859307 TCACCCCTTCCCTCTTGTGCGTTGCAGGCTGGGTAGTTGGGTCTCTGGATATTCTTGGCAG 137854600 24415 NM_000335.4(SCN5A):c.4865G>A (p.Arg1622Gln) SCN5A Sep 01, 2006 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MedGen:C1859062,OMIM:603830;MedGen:CN513938 Congenital long QT syndrome;Long QT syndrome 3;Long qt syndrome 3/6, digenic germline 3 38551504 AGAAGTACTTCTTCTCCCCGACGCTCTTCCGAGTCATCCGCCTGGCCCGAATAGGCCGCAT 587784071 168119 NM_022455.4(NSD1):c.1262G>A (p.Trp421Ter) NSD1 Feb 08, 2013 MedGen:CN035106,OMIM:117550 Sotos syndrome 1 germline 5 177209661 TTAAGGTTCCTCAGAAAATTTTGAGTAAATGGGAAGCCAGTGTTGGACTTGCAGAACAGTA 80357307 70275 NM_007294.3(BRCA1):c.5510G>A (p.Trp1837Ter) BRCA1 Sep 08, 2016 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome germline 17 43045760 TGTGTGAGGCACCTGTGGTGACCCGAGAGTGGGTGTTGGACAGTGTAGCACTCTACCAGTG 113173389 98458 NM_000169.2(GLA):c.281G>A (p.Cys94Tyr) GLA May 10, 2013 Human Phenotype Ontology:HP:0001071,MedGen:C0002986,OMIM:301500,Orphanet:ORPHA324,SNOMED CT:16652001 Fabry disease germline X 101403899 CAGGTTATGAGTACCTCTGCATTGATGACTGTTGGATGGCTCCCCAAAGAGATTCAGAAGG 104886317 35712 NM_000495.4(COL4A5):c.1165+1G>A COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108586748 AGGGTCCACCTGGCCTTCCTGGACCTCCAGGTAAATGAGATTGCATTTATGGCCTTGTTCT 72552281 368543 NM_001080.3(ALDH5A1):c.526G>A (p.Gly176Arg) ALDH5A1 Mar 19, 2015 MedGen:CN517202 not provided germline 6 24503350 TGGTTCTCTGAGGAAGCCCGCCGTGTTTACGGAGACATTATCCACACCCCGGCAAAGGACA 863224444 212745 NM_000264.4(PTCH1):c.945+1G>A PTCH1 Dec 09, 2015 MedGen:C0004779,OMIM:109400,Orphanet:ORPHA377,SNOMED CT:69408002 Gorlin syndrome germline 9 95480389 GCCACAGCCCCCAACAAAAATTCAACCAAAGTGAGTACCAGCAGTGAGCGCTCTCAGAAGG 747904021 192576 NM_001178007.1(BBS12):c.1704G>A (p.Trp568Ter) BBS12 Dec 23, 2014 MedGen:C1859570,OMIM:615989 Bardet-Biedl syndrome 12 germline 4 122743596 GAAAAAAGAAAACCATGCCTGCTCAGGGTGGCTGCATAATACTTCCTCTTGGCTGGCTTCA 281874703 35898 NM_000495.4(COL4A5):c.2722G>A (p.Gly908Arg) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108621847 ATGGGTATGATGGGACCTCCAGGCCCACCAGGACCTTTGGGAATTCCTGGCAGGAGTGGTG 121917771 27300 NM_003361.3(UMOD):c.764G>A (p.Cys255Tyr) UMOD Mar 01, 2003 MedGen:C0268113,OMIM:162000,Orphanet:ORPHA209886,SNOMED CT:46785007 Familial juvenile gout germline 16 20348537 GCAAGGCCTGCGCGCACTGGAGCGGCCACTGCTGCCTGTGGGATGCGTCCGTCCAGGTGAA 886041410 264987 NM_000496.2(CRYBB2):c.563G>A (p.Arg188His) CRYBB2 Oct 03, 2016 MedGen:CN517202 not provided germline 22 25231717 GGGCCCCTCACCCCCAGGTGCAGTCCGTGCGCCGTATCCGCGACATGCAGTGGCACCAACG 121912853 32499 NM_000094.3(COL7A1):c.8245G>A (p.Gly2749Arg) COL7A1 Apr 01, 1996 MedGen:C0079474,OMIM:226600,SNOMED CT:48528004 Recessive dystrophic epidermolysis bullosa germline 3 48566719 TGTGTCTGACAGGGTGAGCGAGGTCCCCCCGGAGAGAGAGTGGTGGGGGCTCCTGGGGTCC 113560320 15440 NM_017841.2(SDHAF2):c.232G>A (p.Gly78Arg) SDHAF2 Sep 06, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1866552,OMIM:601650;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Paragangliomas 2;not provided germline 11 61437820 GCCCGCCTGCTCTATGAGAGCAGAAAGAGGGGAATGTTGGAAAACTGCATTCTTCTTAGGT 1057518967 360896 NM_000089.3(COL1A2):c.2549G>A (p.Gly850Glu) COL1A2 Apr 01, 2014 Human Phenotype Ontology:HP:0005855,MedGen:C1853171;Human Phenotype Ontology:HP:0002652,MedGen:C0410528,SNOMED CT:105986008 Multiple prenatal fractures;Skeletal dysplasia unknown 7 94423102 CTGGCTTCGCTGGTGAGAAGGGTCCCTCTGGAGAGGCTGGTACTGCTGTAAGTGATTTCCA 61751377 105240 NM_000350.2(ABCA4):c.5196+1G>A ABCA4 Aug 17, 2016 MeSH:C535804,MedGen:C1855465,OMIM:248200;MedGen:CN517202 Stargardt disease 1;not provided germline;unknown 1 94019581 TACTGGGTGACCAACTTCCTCTGGGACATCGTAAGTGTCAGTTTACAGCGCCTCCCTCCCC 1057519057 362058 NM_005215.3(DCC):c.2677G>A (p.Ala893Thr) DCC Jan 01, 2016 MedGen:C0175754,OMIM:217990,Orphanet:ORPHA200 Corpus callosum agenesis germline 18 53391876 GTCCGGTGGAGAACCAGCTTTTCTGCAAGTGCAAAATACAAGGTGAAGTTCTAATTGATAG 786200936 21359 NM_001022.3(RPS19):c.380G>A (p.Gly127Glu) RPS19 Mar 19, 2009 MedGen:C2676137,OMIM:105650 Diamond-Blackfan anemia 1 germline 19 41869722 CCCACAGCGGCCGCAAACTGACACCTCAGGGACAAAGAGATCTGGACAGAATCGCCGGACA 397516083 51977 NM_000256.3(MYBPC3):c.927-9G>A MYBPC3 Aug 22, 2017 MedGen:CN230736;MedGen:C1861862,OMIM:115197;Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569;MedGen:C3715165,OMIM:615396;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Cardiovascular phenotype;Familial hypertrophic cardiomyopathy 4;Hypertrophic cardiomyopathy;Left ventricular noncompaction 10;Primary familial hypertrophic cardiomyopathy;not provided germline;unknown 11 47346379 AGTCTTGCCCCCGGCCACAGCCTAGACTGCGGGACACAGGGACTCGAAGCTGGAGGCACCA 180177360 78977 NM_017890.4(VPS13B):c.4923G>A (p.Trp1641Ter) VPS13B Oct 28, 2014 MedGen:C0265223,OMIM:216550,Orphanet:ORPHA193,SNOMED CT:56604005;MedGen:CN517202 Cohen syndrome;not provided germline;unknown 8 99556552 GCAGTCCATCAATATTGGTACTGCACAGTGGCATCAACTAAAACCAGAGAAGGAAAGTGTC 200086262 214743 NM_033453.3(ITPA):c.452G>A (p.Trp151Ter) ITPA Nov 10, 2017 MedGen:C4225256,OMIM:616647,Orphanet:ORPHA457375;MedGen:CN517202 Epileptic encephalopathy, early infantile, 35;not provided germline 20 3221881 TGGCACCCAGAGGCTGCCAGGACTTTGGCTGGGACCCCTGCTTTCAGCCTGATGGATATGA 1057520592 374913 NM_001271.3(CHD2):c.1809+1G>A CHD2 Jan 04, 2017 MedGen:CN517202 not provided germline 15 92955513 ACAACATATGAGATCCTCTTGAAAGATAAGGTGTGTAATTAATATCTAAAAGGCTAAATCT 80338715 34362 NM_014251.2(SLC25A13):c.15G>A (p.Lys5=) SLC25A13 Jan 05, 2012 MedGen:C1853942,OMIM:605814,Orphanet:ORPHA247598 Neonatal intrahepatic cholestasis caused by citrin deficiency not provided 7 96321942 GCAACCGGGGCGAATCATGGCGGCCGCCAAGGTAACCGCGGGCCCGAGGCCGGGGGGAGCG 104894445 24329 NM_000161.2(GCH1):c.551G>A (p.Arg184His) GCH1 Dec 30, 2014 MedGen:C0268467,OMIM:233910,Orphanet:ORPHA2102,SNOMED CT:23447005 GTP cyclohydrolase I deficiency germline;not applicable 14 54845843 AGCTCCTTATCACATCCACAGTTCAGGAGCGCCTTACAAAACAAATTGCTGTAGCAATCAC 886041995 264395 NM_078480.2(PUF60):c.485G>A (p.Trp162Ter) PUF60 Sep 22, 2016 MedGen:CN517202 not provided germline 8 143818398 TTGGCCCCATCAAGAGCATCGACATGTCCTGGGACTCCGTCACCATGAAGCACAAGGTCAG 72554308 26053 NM_000531.5(OTC):c.119G>A (p.Arg40His) OTC Oct 25, 2016 MedGen:C0268542,OMIM:311250,Orphanet:ORPHA664,SNOMED CT:80908008;MedGen:CN517202 Ornithine carbamoyltransferase deficiency;not provided germline;unknown X 38367332 CACTACAAAATAAAGTGCAGCTGAAGGGCCGTGACCTTCTCACTCTAAAAAACTTTACCGG 587777184 106808 NM_001166111.1(PNPLA6):c.787G>A (p.Val263Ile) PNPLA6 Jul 25, 2014 MedGen:C2677586,OMIM:612020,Orphanet:ORPHA139480 Spastic paraplegia 39 germline 19 7540675 GTGGTGAAGGAAGTGGTTCCTGGGGACAGCGTCAACAGCCTTCTCAGCATCCTGGATGTCA 142724470 65572 NM_052961.3(SLC26A8):c.2434G>A (p.Glu812Lys) SLC26A8 May 02, 2013 Gene:338331,MedGen:C1847540,OMIM:606766 Spermatogenic failure 3 germline 6 35951201 GGCTCCTCTGAGTTAAGCATCGATGAATCCGAGACAGTGATACGGGAAACCTACTCAGAAA 28937595 20996 NM_006996.2(SLC19A2):c.515G>A (p.Gly172Asp) SLC19A2 Aug 23, 2015 MedGen:C0342287,OMIM:249270,Orphanet:ORPHA49827,SNOMED CT:237617006;MedGen:CN517202 Megaloblastic anemia, thiamine-responsive, with diabetes mellitus and sensorineural deafness;not provided germline 1 169477447 GAAGTGCCACTTTGGTGGGCTTTACAGTGGGCTCTGTCCTAGGGCAAATCCTTGTCTCAGT 397516308 52406 NM_000260.3(MYO7A):c.4293G>A (p.Trp1431Ter) MYO7A Dec 01, 2015 MedGen:C1568247,OMIM:276900,Orphanet:ORPHA231169 Usher syndrome, type 1 germline 11 77194494 GATCACGCCCCTGAAGACGCTGGAGAAGTGGGCCCAGCTGGCCATCGCCGCCCACAAGAAG 530612385 258690 NM_000218.2(KCNQ1):c.564G>A (p.Trp188Ter) KCNQ1 Mar 23, 2015 MedGen:CN230736 Cardiovascular phenotype germline 11 2570714 CGGCTGCCGCAGCAAGTACGTGGGCCTCTGGGGGCGGCTGCGCTTTGCCCGGAAGCCCATT 886042883 269985 NM_004369.3(COL6A3):c.6354+1G>A COL6A3 Dec 12, 2017 MedGen:CN029274,OMIM:158810;MedGen:CN033863,OMIM:254090;MedGen:CN517202 Bethlem myopathy 1;Ullrich congenital muscular dystrophy 1;not provided germline 2 237359205 ATTGGACTGGATGGTCTGGATGGTGAAGATGTAAGTGATTTTACTCTAAGTCCAAACTGCT 104894582 23964 NM_000891.2(KCNJ2):c.904G>A (p.Val302Met) KCNJ2 Aug 01, 2002 MedGen:C1563715,OMIM:170390,Orphanet:ORPHA37553,SNOMED CT:422348008;MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000 Andersen Tawil syndrome;Congenital long QT syndrome germline 17 70175943 TTTGAAATCGTGGTCATACTGGAAGGCATGGTGGAAGCCACTGCCATGACGACACAGTGCC 121918677 27655 NM_001063.3(TF):c.2012G>A (p.Gly671Glu) TF May 01, 1984 na Transferrin variant b2 germline 3 133777188 ATGACAGAAACACATATGAAAAATACTTAGGAGAAGAATATGTCAAGGCTGTTGGTAACCT 796053229 247729 NM_014191.3(SCN8A):c.5615G>A (p.Arg1872Gln) SCN8A Jul 27, 2017 MedGen:C3281191,OMIM:614558;MedGen:CN517202 Early infantile epileptic encephalopathy 13;not provided germline 12 51807101 TGGACATCCTGCGGCAGCAGATGGAAGAGCGGTTCGTGGCATCCAATCCTTCCAAAGTGTC 1064793798 409744 NM_016373.3(WWOX):c.1115G>A (p.Gly372Glu) WWOX Jun 23, 2015 MedGen:CN517202 not provided germline 16 79211666 GTGCTGCTGTCCCAGAACTGGAGGGTCTGGGAGGGATGTACTTCAACAACTGCTGCCGCTG 886041839 265078 NM_000444.5(PHEX):c.1587-1G>A PHEX Jan 25, 2017 MedGen:CN517202 not provided germline X 22190443 TGCTCTCTGGCATTTGTTTCTTTTTCTACAGGTGGTTTACAAATCCGACGACTGTCAATGC 398122711 97208 NM_000059.3(BRCA2):c.8633-1G>A BRCA2 Oct 02, 2015 MedGen:C2675520,OMIM:612555 Breast-ovarian cancer, familial 2 germline 13 32376669 TAGTGAATTAATAATCCTTTTGTTTTCTTAGAAAACACAACAAAACCATATTTACCATCAC 1057520755 371403 NM_000280.4(PAX6):c.486G>A (p.Trp162Ter) PAX6 May 27, 2015 MedGen:CN517202 not provided germline 11 31800728 GACCGGAAGCTGGGGCACCCGCCCTGGTTGGTATCCGGGGACTTCGGTGCCAGGGCAACCT 1057519611 38683 NM_000834.4(GRIN2B):c.411+1G>A GRIN2B Nov 01, 2010 MedGen:C3151411,OMIM:613970 Mental retardation, autosomal dominant 6 germline 12 13865797 GGGGGCTCCTCTATGATAATGGCAGATAAGGTAAAAAGGGGCTGCAGGGAGAAGGGCCTGA 781404312 186796 NM_000051.3(ATM):c.3G>A (p.Met1Ile) ATM Aug 24, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Ataxia-telangiectasia syndrome;Hereditary cancer-predisposing syndrome;not provided germline;unknown 11 108227627 AGTGATGTGTGTTCTGAAATTGTGAACCATGAGTCTAGTACTTAATGATCTGCTTATCTGC 121908037 18773 NM_000527.4(LDLR):c.2531G>A (p.Gly844Asp) LDLR Mar 25, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11129654 ATGAGGTCCACATTTGCCACAACCAGGACGGCTACAGCTACCCCTCGGTGAGTGACCCTCT 81002820 66728 NM_000059.3(BRCA2):c.632-1G>A BRCA2 Oct 02, 2015 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome germline 13 32329442 TATACAATACACATAAATTTTTATCTTACAGTCAGAAATGAAGAAGCATCTGAAACTGTAT 120074188 18171 NM_000218.2(KCNQ1):c.1573G>A (p.Ala525Thr) KCNQ1 Apr 06, 2012 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MedGen:C4017089;MedGen:CN517202 Congenital long QT syndrome;Long QT syndrome 1, recessive;not provided germline 11 2768902 AAGGTCATTCGACGCATGCAGTACTTTGTGGCCAAGAAGAAATTCCAGGTAAGCCCTGTGC 121908135 19460 NM_031475.2(ESPN):c.2230G>A (p.Asp744Asn) ESPN Feb 01, 2006 MedGen:CN068820 Deafness, without vestibular involvement, autosomal dominant germline 1 6452001 CTGGACGTGGAGGCTCTCATCCCCACGCACGATGAGCAGGGCCGGCCCATCCCCGAGTGGA 760576804 193556 NM_004572.3(PKP2):c.368G>A (p.Trp123Ter) PKP2 Mar 02, 2017 MedGen:C1836906,OMIM:609040;MedGen:CN517202 Arrhythmogenic right ventricular cardiomyopathy, type 9;not provided germline 12 32878512 CTGGCACAACTGCCACTTATGAAGGTCGCTGGGGAAGAGGAACAGCACAGTACAGCTCCCA 886039517 259669 NM_006516.2(SLC2A1):c.635G>A (p.Arg212His) SLC2A1 Apr 06, 2016 MedGen:CN517202 not provided germline 1 42929917 TCGTGCTGCCCTTCTGCCCCGAGAGTCCCCGCTTCCTGCTCATCAACCGCAACGAGGAGAA 398122368 94452 NM_003073.4(SMARCB1):c.110G>A (p.Arg37His) SMARCB1 Sep 07, 2016 MedGen:C3553248,OMIM:614608;MedGen:CN517202 Mental retardation, autosomal dominant 15;not provided germline 22 23791772 TGCTTTACTCATAGGTGGGAAACTACCTCCGTATGTTCCGAGGTTCTCTGTACAAGAGATA 886041370 265041 NM_000199.3(SGSH):c.629G>A (p.Trp210Ter) SGSH Sep 01, 2016 MedGen:CN517202 not provided germline 17 80214206 GAGAGAGCGGCATGGGTCGTATCCCAGACTGGACCCCCCAGGCCTACGACCCACTGGACGT 1131692200 424309 NM_000527.4(LDLR):c.805G>A (p.Gly269Ser) LDLR Mar 30, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11106675 TATGACTGCAAGGACATGAGCGATGAAGTTGGCTGCGTTAATGGTGAGCGCTGGCCATCTG 121434249 18383 NM_000348.3(SRD5A2):c.682G>A (p.Ala228Thr) SRD5A2 Sep 08, 2017 MedGen:C0268297,OMIM:264600,Orphanet:ORPHA753,SNOMED CT:57514000 3-Oxo-5 alpha-steroid delta 4-dehydrogenase deficiency germline 2 31529323 TTTTTCTCACTTTGTTTCCTTGGGCTGCGAGCTTTTCACCACCATAGGTAAATTTTTCAAT 398123607 99627 NM_001360.2(DHCR7):c.841G>A (p.Val281Met) DHCR7 Jun 02, 2017 MedGen:C0175694,OMIM:270400,Orphanet:ORPHA818,SNOMED CT:43929004;MedGen:CN517202 Smith-Lemli-Opitz syndrome;not provided germline;unknown 11 71437934 GCGGCTGCTTCTGTCTTGCAGGCCATCTACGTGATTGACTTCTTCTGGAACGAAACCTGGT 121908714 16995 NM_000022.3(ADA):c.302G>A (p.Arg101Gln) ADA Aug 01, 1985 MedGen:C1863236,OMIM:102700,Orphanet:ORPHA277 Severe combined immunodeficiency due to ADA deficiency germline;unknown 20 44626516 CCAAAGAGGGCGTGGTGTATGTGGAGGTGCGGTACAGTCCGCACCTGCTGGCCAACTCCAA 180177484 103873 NM_001243133.1(NLRP3):c.910G>A (p.Glu304Lys) NLRP3 Apr 27, 2017 MedGen:C0343068,OMIM:120100,Orphanet:ORPHA47045,SNOMED CT:238687000;MedGen:CN517202 Familial cold urticaria;not provided germline 1 247424359 AGAATCCTCTTCCTCATGGACGGCTTCGATGAGCTGCAAGGTGCCTTTGACGAGCACATAG 72559716 186812 NM_000352.4(ABCC8):c.4411G>A (p.Asp1471Asn) ABCC8 Feb 17, 2016 MedGen:C3888018,Orphanet:ORPHA276525;MedGen:C1257959,OMIM:256450,SNOMED CT:360339005 Familial hyperinsulinism;Persistent hyperinsulinemic hypoglycemia of infancy germline;unknown 11 17395172 CTGGTGGTGAAGGCACTGCCAGGAGGCCTCGGTAACTACTCCTGGCTATGCAGCTGGGTTG 267607735 95622 NM_000249.3(MLH1):c.306+5G>A MLH1 Sep 05, 2013 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:C1333991,OMIM:609310;MedGen:CN517202 Lynch syndrome;Lynch syndrome II;not provided germline;unknown 3 37001058 TTTCTACCTATGGCTTTCGAGGTGAGGTAAGCTAAAGATTCAAGAAATGTGTAAAATATCC 281875187 38965 NM_003070.4(SMARCA2):c.3476G>A (p.Arg1159Gln) SMARCA2 Feb 26, 2012 MedGen:C1303073,OMIM:601358,Orphanet:ORPHA3051,SNOMED CT:401046009;MedGen:CN517202 Nicolaides-Baraitser syndrome;not provided germline 9 2115841 CCCCCAAACAGGATCTGCAGGCCCAAGACCGAGCTCACCGCATCGGGCAGCAGAACGAGGT 387907347 51195 NM_001130004.1(ACTN1):c.2255G>A (p.Arg752Gln) ACTN1 Mar 07, 2013 MedGen:C3554663,OMIM:615193 Platelet-type bleeding disorder 15 germline 14 68879987 GCATCAGCCAGGAGCAGATGAATGAGTTCCGGGCCTCCTTCAACCACTTTGACCGGGTGAG 122467170 26449 NM_014009.3(FOXP3):c.1150G>A (p.Ala384Thr) FOXP3 Jan 01, 2001 MedGen:C0342288,OMIM:304790,Orphanet:ORPHA37042,SNOMED CT:237618001 Insulin-dependent diabetes mellitus secretory diarrhea syndrome germline X 49251480 CTGCTCCCTGTCCCCGGCCTTCCACAGAACGCCATCCGCCACAACCTGAGTCTGCACAAGT 587776717 24491 NM_004525.2(LRP2):c.2640-1G>A LRP2 Jun 28, 2011 MedGen:C1857277,OMIM:222448,Orphanet:ORPHA2143 Donnai Barrow syndrome germline 2 169256237 TAAGAGATAACTAAATATTTTATTATTTTAGTGCTTCACGATTGTACTGGGTAGATGCCTA 587779460 106897 NM_000090.3(COL3A1):c.2114G>A (p.Gly705Glu) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188999376 GAGGTGGAGCTGGTCCCCCTGGTCCCGAAGGAGGAAAGGTAACTCCACAGCATTCCATTCA 387906628 38663 NM_004960.3(FUS):c.616G>A (p.Gly206Ser) FUS Aug 31, 2010 MedGen:C1842675,OMIM:608030 Amyotrophic lateral sclerosis type 6 germline 16 31185031 AATCAAGACCAGAGTGGTGGAGGTGGCAGCGGTGGCTATGGACAGCAGGACCGTGGAGGCC 80358008 131263 NM_007294.3(BRCA1):c.4676-1G>A BRCA1 Mar 30, 2016 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome germline 17 43071239 GTGTAAATTAAACTTCTCCCATTCCTTTCAGAGGGAACCCCTTACCTGGAATCTGGAATCA 1057519733 362861 NM_002755.3(MAP2K1):c.607G>A (p.Glu203Lys) MAP2K1 Oct 02, 2014 Human Phenotype Ontology:HP:0002861,MeSH:D008545,MedGen:C0025202,SNOMED CT:2092003 Malignant melanoma somatic 15 66481793 CCCTCCAACATCCTAGTCAACTCCCGTGGGGAGATCAAGCTCTGTGACTTTGGGGTCAGCG -1 481114 NM_000096.3(CP):c.1208+1G>A CP Jan 01, 2009 MedGen:C0878682,OMIM:604290,Orphanet:ORPHA48818,SNOMED CT:124224004 Deficiency of ferroxidase germline 3 149206167 CACTAAAGAAAACTTAACAGCACCTGGAAGGTAATTTACAAAAAAAGAGTACTATTTCAAA 28935174 26531 NM_006579.2(EBP):c.440G>A (p.Arg147His) EBP Feb 08, 2013 MedGen:C0282102,OMIM:302960,Orphanet:ORPHA35173 Chondrodysplasia punctata 2 X-linked dominant germline X 48527256 TGATCGCCTTTCTCCGCCAGCATCCCCTCCGCTTCATTCTACAGCTTGTGGTCTCTGTGGG 746368198 264511 NM_000017.3(ACADS):c.820G>A (p.Gly274Ser) ACADS Sep 30, 2016 MedGen:CN517202 not provided germline 12 120738557 CCACAGCAAACCCTGGACATGGGCCGCATCGGCATCGCCTCCCAGGCCCTGGGCATTGCCC 397518470 94309 NM_000833.4(GRIN2A):c.1553G>A (p.Arg518His) GRIN2A Jun 30, 2017 MedGen:C1832814,OMIM:245570;MedGen:CN517202 Epilepsy, focal, with speech disorder and with or without mental retardation;not provided germline 16 9840745 CAGTTGGCTCGCTCACCATCAATGAGGAACGTTCTGAAGTGGTGGACTTCTCTGTGCCCTT 80358173 131342 NM_007294.3(BRCA1):c.5194-1G>A BRCA1 May 29, 2002 MedGen:C2676676,OMIM:604370 Breast-ovarian cancer, familial 1 germline 17 43057136 ATCCTGATGGGTTGTGTTTGGTTTCTTTCAGCATGATTTTGAAGTCAGAGGAGATGTGGTC 786204123 186291 NM_000166.5(GJB1):c.425G>A (p.Arg142Gln) GJB1 Dec 28, 2016 MedGen:CN118851 Charcot-Marie-Tooth Neuropathy X germline X 71224132 GGTGGACCTATGTCATCAGCGTGGTGTTCCGGCTGTTGTTTGAGGCCGTCTTCATGTATGT 28934586 16210 NM_000497.3(CYP11B1):c.1343G>A (p.Arg448His) CYP11B1 Sep 01, 2005 MedGen:C0268292,OMIM:202010,Orphanet:ORPHA90795,SNOMED CT:124214007 Deficiency of steroid 11-beta-monooxygenase germline 8 142875012 TCTACCACGTGCCCTTTGGCTTTGGCATGCGCCAGTGCCTTGGGCGGCGCCTGGCAGAGGC 111033299 53902 NM_004004.5(GJB2):c.283G>A (p.Val95Met) GJB2 May 18, 2017 MedGen:C1844678,OMIM:304400,Orphanet:ORPHA383;MedGen:C2675750,OMIM:601544;MedGen:C2673759,OMIM:220290;MedGen:C2673759,OMIM:220290;Human Phenotype Ontology:HP:0000365,MedGen:C0018772;MedGen:C1865234,OMIM:602540;MedGen:C1835678,OMIM:148210;MedGen:C1835672,OMIM:148350,Orphanet:ORPHA2202;MedGen:C0266004,OMIM:149200,Orphanet:ORPHA2698,SNOMED CT:1271009;MedGen:C0265964,OMIM:124500,Orphanet:ORPHA494,SNOMED CT:24559001;MedGen:CN043648,Orphanet:ORPHA87884;MedGen:CN517202;MedGen:CN169374 Deafness, X-linked 2;Deafness, autosomal dominant 3a;Deafness, autosomal recessive 1A;Deafness, autosomal recessive 1A;Hearing impairment;Hystrix-like ichthyosis with deafness;Keratitis-ichthyosis-deafness syndrome, autosomal dominant;Keratoderma palmoplantar deafness;Knuckle pads, deafness AND leukonychia syndrome;Mutilating keratoderma;Nonsyndromic hearing loss and deafness;not provided;not specified germline;unknown 13 20189299 TCCACGCCAGCGCTCCTAGTGGCCATGCACGTGGCCTACCGGAGACATGAGAAGAAGAGGA 387907001 39713 NM_133261.2(GIPC3):c.767G>A (p.Gly256Asp) GIPC3 Dec 01, 2011 MedGen:C1866094,OMIM:601869 Deafness, autosomal recessive 15 germline 19 3589892 AGGTTGATGACCTGCTGGAAAGCTACATGGGCATTCGGGACCCCGAGCTGGGTAAGGGGCC 137852219 25742 NM_203473.2(PORCN):c.222G>A (p.Trp74Ter) PORCN Jul 01, 2007 MedGen:C0016395,OMIM:305600,Orphanet:ORPHA2092 Focal dermal hypoplasia germline X 48511380 CTACCACTTCTTCCAGCTGCACATGGTTTGGGTCGTGCTGCTCAGCCTCCTGTGCTACCTC -1 487321 NM_000181.3(GUSB):c.1337G>A (p.Trp446Ter) GUSB Dec 22, 2016 MedGen:C0026709,OMIM:253200,Orphanet:ORPHA583 Mucopolysaccharidosis type VI germline 7 65974349 GGGACAAGAACCACCCCGCGGTCGTGATGTGGTCTGTGGCCAACGAGCCTGCGTCCCACCT 28940578 17578 NM_000243.2(MEFV):c.2082G>A (p.Met694Ile) MEFV Jun 25, 2017 MedGen:C0031069,OMIM:249100,Orphanet:ORPHA342,SNOMED CT:12579009;MedGen:C1851347,OMIM:134610;MedGen:C1851347,OMIM:134610;MedGen:CN517202;MedGen:CN169374 Familial Mediterranean fever;Familial mediterranean fever, autosomal dominant;Familial mediterranean fever, autosomal dominant;not provided;not specified germline;unknown 16 3243405 AGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTT 121908204 79638 NM_000391.3(TPP1):c.380G>A (p.Arg127Gln) TPP1 Jun 01, 2017 MedGen:C1876161,OMIM:204500,Orphanet:ORPHA228349;MedGen:CN517202 Ceroid lipofuscinosis neuronal 2;not provided germline 11 6617626 AGGACTTTCTGACTTGCTGGCTGAGCATCCGGTGAGAGGAAATGATTGCTCCATGGAGGGC 147914967 188223 NM_001288953.1(TTC7A):c.109G>A (p.Glu37Lys) TTC7A Dec 01, 2014 MedGen:C0220744,OMIM:243150,Orphanet:ORPHA436252,SNOMED CT:95472001 Multiple gastrointestinal atresias germline 2 46950389 TCAGATGACTTTGGGAAATTGCTGCTGGCTGAGGCCCTCCTGGAGCAGTGTTTGAAGGAGA 587780833 139864 NM_032043.2(BRIP1):c.627+1G>A BRIP1 Jun 03, 2016 MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Familial cancer of breast;Hereditary cancer-predisposing syndrome;not provided germline 17 61847100 GAAAAGATAAACTCCTTTTCGCCACAGAAAGTATGTATTAATGCCATTGTTCAGTTTTAAA 66619856 457708 NM_000089.3(COL1A2):c.1072G>A (p.Gly358Ser) COL1A2 Mar 02, 2017 MedGen:C0268335,OMIM:130000,Orphanet:ORPHA287,SNOMED CT:20766005,SNOMED CT:83470009;MedGen:C0023931,OMIM:166200,SNOMED CT:385482004 Ehlers-Danlos syndrome, classic type;Osteogenesis imperfecta type I germline 7 94410278 CCTGGTCCAGCTGGCTCCAAAGGAGAGAGCGGTAACAAGGGTGAGCCCGTAAGTAGCTCTA 66490707 414007 NM_000088.3(COL1A1):c.1299+1G>A COL1A1 Aug 11, 2017 MedGen:C0023931,OMIM:166200,SNOMED CT:385482004 Osteogenesis imperfecta type I germline;unknown 17 50195231 GGCGGCCCTCCTGGTCCCAAGGGTAACAGCGTGAGTACCAAACTCTCCCTTCTGCCCACCC 55940927 24168 NM_001491.2(GCNT2):c.1148G>A (p.Arg383His) GCNT2 Dec 15, 2001 MedGen:C3805373,OMIM:116700 Cataract 13 with adult i phenotype germline 6 10626552 TTACTGTGGAATGCCTAGAACTGAGGCATCGCGAAAGAACCCTCAATCAGAGTGAAACTGC 104894396 32041 NM_004004.5(GJB2):c.71G>A (p.Trp24Ter) GJB2 May 30, 2017 MedGen:C1844678,OMIM:304400,Orphanet:ORPHA383;MedGen:C2675750,OMIM:601544;MedGen:C2675750,OMIM:601544;MedGen:C2673759,OMIM:220290;MedGen:C2673759,OMIM:220290;Human Phenotype Ontology:HP:0000365,MedGen:C0018772;MedGen:C1865234,OMIM:602540;MedGen:C1835678,OMIM:148210;MedGen:C1835672,OMIM:148350,Orphanet:ORPHA2202;MedGen:C0266004,OMIM:149200,Orphanet:ORPHA2698,SNOMED CT:1271009;MedGen:C0265964,OMIM:124500,Orphanet:ORPHA494,SNOMED CT:24559001;MedGen:CN043648,Orphanet:ORPHA87884;MedGen:CN517202 Deafness, X-linked 2;Deafness, autosomal dominant 3a;Deafness, autosomal dominant 3a;Deafness, autosomal recessive 1A;Deafness, autosomal recessive 1A;Hearing impairment;Hystrix-like ichthyosis with deafness;Keratitis-ichthyosis-deafness syndrome, autosomal dominant;Keratoderma palmoplantar deafness;Knuckle pads, deafness AND leukonychia syndrome;Mutilating keratoderma;Nonsyndromic hearing loss and deafness;not provided germline;unknown 13 20189511 ACAAACACTCCACCAGCATTGGAAAGATCTGGCTCACCGTCCTCTTCATTTTTCGCATTAT 1131692253 424408 NM_003901.3(SGPL1):c.261+1G>A SGPL1 Dec 18, 2017 MedGen:CN339707,OMIM:617575 NEPHROTIC SYNDROME 14 germline 10 70851211 ACCAGGAAGATGCCCATTATTGGTCGTAAGGTAAGTAGAATCTGTGTATGTCATTTTTTCC 118204066 16576 NM_000237.2(LPL):c.1227G>A (p.Trp409Ter) LPL Dec 01, 1991 MedGen:C0023817,OMIM:238600,Orphanet:ORPHA309015,SNOMED CT:238086005,SNOMED CT:275598004 Hyperlipoproteinemia, type I germline 8 19960988 TGGAGAACTACTCATGTTGAAGCTCAAATGGAAGAGTGATTCATACTTTAGCTGGTCAGAC 121908215 23535 NM_001127221.1(CACNA1A):c.877G>A (p.Gly293Arg) CACNA1A Jun 28, 2005 MedGen:C1720416,OMIM:108500,Orphanet:ORPHA97,SNOMED CT:420932006;MedGen:C0752124,OMIM:183086,Orphanet:ORPHA98758 Episodic ataxia type 2;Spinocerebellar ataxia 6 germline 19 13359707 AATGGGACCAAATGTCAGCCCTACTGGGAAGGGCCCAACAACGGGATCACTCAGTTCGACA 121913528 27620 NM_033360.3(KRAS):c.175G>A (p.Ala59Thr) KRAS Jul 14, 2015 MedGen:C4016403;MeSH:D015179,MedGen:CN236642 Bladder cancer, transitional cell, somatic;Colorectal Neoplasms somatic 12 25227349 GAAACCTGTCTCTTGGATATTCTCGACACAGCAGGTCAAGAGGAGTACAGTGCAATGAGGG 869025191 181513 NM_006912.5(RIT1):c.229G>A (p.Ala77Thr) RIT1 Oct 27, 2017 MeSH:D009634,MedGen:C0028326,Orphanet:ORPHA648,SNOMED CT:205824006;MedGen:C3809233,OMIM:615355;MedGen:CN517202 Noonan syndrome;Noonan syndrome 8;not provided de novo;germline;unknown 1 155904739 GAGCCTGCCAATCTGGACATTTTGGATACAGCTGGACAGGTATTAAATCCCAGAATGTTAT 886037831 227489 NM_000523.3(HOXD13):c.781+1G>A HOXD13 Aug 12, 2016 MedGen:C2699746,OMIM:186000,Orphanet:ORPHA93403 Synpolydactyly 1 germline 2 176093672 GGTCCCACTTTTGGAAATCTTCCTTTCCAGGTAGGGGCGATGGAGAAAAGGGACCGACACG 180177366 71322 NM_017890.4(VPS13B):c.6732+1G>A VPS13B Jul 27, 2017 MedGen:C0265223,OMIM:216550,Orphanet:ORPHA193,SNOMED CT:56604005;MedGen:CN517202 Cohen syndrome;not provided germline 8 99717374 TCCATTGACTTAAGAGGAGGTCTACTACAGGTCTGTGGGTATTGGCCATATTTTTTTCATA 869312894 226684 NM_139276.2(STAT3):c.2107G>A (p.Ala703Thr) STAT3 Sep 15, 2016 MedGen:C4014795,OMIM:615952,Orphanet:ORPHA438159 Autoimmune disease, multisystem, infantile-onset, 1 germline;inherited 17 42317219 AGAAAACTGGTTTTCTTCTTCCCAGGCGCTGCCCCATACCTGAAGACCAAGTTTATCTGTG 121918146 15701 NM_000312.3(PROC):c.925G>A (p.Ala309Thr) PROC Mar 21, 1992 MedGen:C2676759,OMIM:612304 Thrombophilia, hereditary, due to protein C deficiency, autosomal recessive germline 2 127428485 GACATCGCACTGCTGCACCTGGCCCAGCCCGCCACCCTCTCGCAGACCATAGTGCCCATCT 786204984 187589 NM_003159.2(CDKL5):c.403+1G>A CDKL5 Mar 13, 2014 MedGen:C2748910,Orphanet:ORPHA3095 Atypical Rett syndrome de novo X 18579969 GGTGCCATAAGAATGATATTGTCCATCGAGGTGAGTATGAGATTTTTAAAATGGAAAATAT 1064797086 411536 NM_001271012.1(FLI1):c.431G>A (p.Arg144Gln) FLI1 Apr 25, 2017 MedGen:CN242283,OMIM:617443 Bleeding disorder, platelet-type, 21 germline 11 128810639 AGCCCAACATGAATTACGACAAGCTGAGCCGGGCCCTCCGTTATTACTATGATAAAAACAT 753288303 216044 NM_000255.3(MUT):c.1280G>A (p.Gly427Asp) MUT Feb 09, 2017 Human Phenotype Ontology:HP:0002912,MedGen:C0268583,SNOMED CT:42393006;MedGen:C1855114,OMIM:251000 Methylmalonic acidemia;Methylmalonic aciduria due to methylmalonyl-CoA mutase deficiency germline 6 49451518 GGATTCCCAAAGTGGCTGATCCTTGGGGAGGTTCTTACATGATGGAATGTCTCACAAATGA 45507199 59122 NM_000548.4(TSC2):c.5228G>A (p.Arg1743Gln) TSC2 May 11, 2017 MedGen:C1860707,OMIM:613254;MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000;MedGen:CN517202 Tuberous sclerosis 2;Tuberous sclerosis syndrome;not provided germline 16 2088294 CCGATATCTACCCCTCCAAGTGGATTGCCCGGCTCCGCCACATCAAGCGGCTCCGCCAGCG 199472712 67758 NM_000218.2(KCNQ1):c.724G>A (p.Asp242Asn) KCNQ1 Aug 04, 2017 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MeSH:D008133,MedGen:C0023976,SNOMED CT:9651007;MedGen:CN517202 Congenital long QT syndrome;Long QT syndrome;not provided germline;inherited 11 2572053 TTCCTGCAGATCCTGAGGATGCTACACGTCGACCGCCAGGGAGGCACCTGGAGGCTCCTGG 104894073 24069 NM_002052.4(GATA4):c.886G>A (p.Gly296Ser) GATA4 Jul 24, 2003 MedGen:C1842778,OMIM:607941 Atrial septal defect 2 germline 8 11750213 GCGGAGGGCGAGCCTGTGTGCAATGCCTGCGGCCTCTACATGAAGCTCCACGGGGTACGTG 786202112 184694 NM_001042492.2(NF1):c.5609G>A (p.Arg1870Gln) NF1 Jun 29, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Neurofibromatosis, type 1;not provided germline 17 31327839 TTAATTTAGGCAGTTCTGACCCGAGTTTACGGTAGGTTTTTTAAAATTCTCTTCAGTTTGA 398123015 49929 NM_020944.2(GBA2):c.2618G>A (p.Arg873His) GBA2 Mar 07, 2017 MedGen:C0037773,Orphanet:ORPHA685,SNOMED CT:39912006;MedGen:C2828721,OMIM:614409,Orphanet:ORPHA320391 Hereditary spastic paraplegia;Spastic paraplegia 46, autosomal recessive germline;inherited 9 35737335 CAGAGGCATACTGCCAGCAGCGAGTGTTCCGCTCACTGGCCTACATGCGGCCACTGAGCAT 121912878 32410 NM_001844.4(COL2A1):c.2905G>A (p.Gly969Ser) COL2A1 Jan 27, 1995 MedGen:C0220685,OMIM:200610,Orphanet:ORPHA93296 Achondrogenesis, type II germline 12 47978389 CTCCTGCCTCTCCTCTCTCAGGGTGCCGAAGGTCCACCAGGTCCCCAGGGTCTGGCTGGTC 80356510 34131 NM_001457.3(FLNB):c.1088G>A (p.Gly363Glu) FLNB Oct 09, 2008 MedGen:C1835564,OMIM:150250 Larsen syndrome, dominant type not provided 3 58097918 ATGCCAGTAAAGTCACTGCAAAAGGTCCAGGGTTGGAAGCTGTAGGGAACATCGCCAATAA 104894821 25480 NM_000166.5(GJB1):c.283G>A (p.Val95Met) GJB1 Jul 05, 2017 MedGen:CN118851;MedGen:C0393808,OMIM:302800,Orphanet:ORPHA101075,SNOMED CT:230552007;MedGen:CN517202 Charcot-Marie-Tooth Neuropathy X;X-linked hereditary motor and sensory neuropathy;not provided germline X 71223990 TCCACCCCAGCTCTCCTCGTGGCCATGCACGTGGCTCACCAGCAACACATAGAGAAGAAAA 67294955 103147 NM_000531.5(OTC):c.583G>A (p.Gly195Arg) OTC Jul 16, 2014 MedGen:CN517202 not provided germline;unknown X 38403660 TCTCTGAAAGGTCTTACCCTCAGCTGGATCGGGGATGGGAACAATATCCTGCACTCCATCA 398122833 227463 NM_000138.4(FBN1):c.8226+1G>A FBN1 Apr 28, 2016 MedGen:C4310796,OMIM:616914,Orphanet:ORPHA300382 Marfan lipodystrophy syndrome germline 15 48412568 ACAAACGAAACTGATGCCTCCAATATCGAGGTGGGTCAGAAGTTAGTTTCTCCTGATGTCT 104894438 24313 NM_000161.2(GCH1):c.602G>A (p.Gly201Glu) GCH1 Oct 01, 2000 MedGen:C1851920,OMIM:128230,Orphanet:ORPHA255 Dystonia 5, Dopa-responsive type germline 14 54845792 TAGCAATCACGGAAGCCTTGCGGCCTGCTGGAGTCGGGGTAGTGGTTGAAGCAACGTAAGT 63750158 432846 NM_000517.4(HBA2):c.95+1G>A HBA2 Jul 13, 2017 MedGen:CN517202 not provided germline 16 173008 TGGCGAGTATGGTGCGGAGGCCCTGGAGAGGTGAGGCTCCCTCCCCTGCTCCGACCCGGGC 864321716 217280 NM_006086.3(TUBB3):c.785G>A (p.Arg262His) TUBB3 Sep 11, 2017 MedGen:C2748801,OMIM:600638;MedGen:CN517202 Fibrosis of extraocular muscles, congenital, 3a, with or without extraocular involvement;not provided germline 16 89935236 AGCTGGCCGTCAACATGGTGCCCTTCCCGCGCCTGCACTTCTTCATGCCCGGCTTCGCCCC 730880691 179301 NM_000256.3(MYBPC3):c.1624+5G>A MYBPC3 Aug 08, 2011 MedGen:CN517202 not provided germline 11 47342573 GGCGCTGGCTGAGCTCATTGTGCAGGGTGAGCCTGGCTGGGGGGGCACATGAGGCTTTAGG 1057520545 365285 NM_006516.2(SLC2A1):c.493G>A (p.Val165Ile) SLC2A1 Mar 11, 2015 MedGen:CN517202 not provided germline 1 42930649 GCCCTGGGCACCCTGCACCAGCTGGGCATCGTCGTCGGCATCCTCATCGCCCAGGTAAGCT 1064794569 411313 NM_004006.2(DMD):c.8390+1G>A DMD Mar 23, 2017 MedGen:CN517202 not provided germline X 31507280 TGAACTTCGGAAAAAGTCTCTCAACATTAGGTAGGAAAAGATGTGGAGCAAAAAGGCCACA 104886305 36123 NM_000495.4(COL4A5):c.4976G>A (p.Ser1659Asn) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108695439 TGGCAACTGTAGATGTGTCAGACATGTTCAGGTAAAGTGCTTATAGCTTTAATTCAGGTCC 267607842 95277 NM_000249.3(MLH1):c.1614G>A (p.Trp538Ter) MLH1 Sep 05, 2013 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Lynch syndrome germline 3 37040241 CTCCTTCGTGGGCTGTGTGAATCCTCAGTGGGCCTTGGCACAGCATCAAACCAAGTTATAC 397514758 75602 NM_005689.3(ABCB6):c.1736G>A (p.Gly579Glu) ABCB6 Sep 01, 2013 MedGen:C3809394,OMIM:615402 Dyschromatosis universalis hereditaria 3 germline 2 219213310 TGGTGCCCTTCCAGGTGAAGGACCTTCCTGGAGCAGGGCCCCTTCGCTTTCAGAAGGGCCG 104886215 35937 NM_000495.4(COL4A5):c.3134G>A (p.Gly1045Glu) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108626237 CAGGGCCTCAGGGTGTGGAAGGGCCTCCTGGACCTTCTGGAGTTCCTGGACAACCTGGCTC 121908963 21720 NM_001130978.1(DYSF):c.895G>A (p.Gly299Arg) DYSF Mar 01, 2008 MedGen:C1850889,OMIM:253601,Orphanet:ORPHA268 Limb-girdle muscular dystrophy, type 2B germline 2 71517028 TCTCGTTCTCTCAGGACAGATGCTCTCCTCGGGGAGTTCCGGGTAATTGCTTATTTTCTAT 121908480 20820 NM_014270.4(SLC7A9):c.313G>A (p.Gly105Arg) SLC7A9 Jul 14, 2017 Human Phenotype Ontology:HP:0003131,MedGen:C0010691,OMIM:220100,Orphanet:ORPHA214,SNOMED CT:85020001;MedGen:CN517202 Cystinuria;not provided germline 19 32864261 GGAGAGTATCCCTACCTGATGGAGGCCTACGGGCCCATCCCCGCCTACCTCTTCTCCTGGG 879254985 246273 NM_000527.4(LDLR):c.1686G>A (p.Trp562Ter) LDLR Mar 30, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11116193 CTACTCGCTGGTGACTGAAAACATTCAGTGGCCCAATGGCATCACCCTAGGTATGTTCGCA 118203968 16076 NM_138387.3(G6PC3):c.758G>A (p.Arg253His) G6PC3 Jan 18, 2015 MedGen:C2675526,OMIM:612541,Orphanet:ORPHA331176 Severe congenital neutropenia 4, autosomal recessive germline 17 44075760 TGGATAGCCGGCCCTTTGCCTCCCTGAGCCGTGACTCAGGGGCTGCCCTGGGCCTGGGCAT 398122887 45780 NM_152296.4(ATP1A3):c.2839G>A (p.Gly947Arg) ATP1A3 Oct 12, 2016 MedGen:C3553788,OMIM:614820;MedGen:C1868681,OMIM:128235,Orphanet:ORPHA71517;Human Phenotype Ontology:HP:0002301,MedGen:C0018991;MedGen:C0014544,Orphanet:ORPHA166463;MedGen:CN517202 Alternating hemiplegia of childhood 2;Dystonia 12;Hemiplegia;Seizure Disorders;not provided de novo;germline;unknown 19 41967744 TGTGCCTCCAGGAACAAGATCCTGATCTTCGGGCTGTTTGAGGAGACGGCCCTGGCTGCCT 121908748 22207 NM_000492.3(CFTR):c.1766+1G>A CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline;unknown 7 117590440 TGTTTTAACAGAAAAAGAAATATTTGAAAGGTATGTTCTTTGAATACCTTACTTATAATGC 1057521068 368950 NM_001024630.3(RUNX2):c.569G>A (p.Arg190Gln) RUNX2 Jan 09, 2017 MedGen:CN517202 not provided germline 6 45432008 CAAGGTTCAACGATCTGAGATTTGTGGGCCGGAGTGGACGAGGTAGGTCTCTGACTTTTGA 886041819 264288 NM_020732.3(ARID1B):c.5811G>A (p.Trp1937Ter) ARID1B Jun 02, 2016 MedGen:CN517202 not provided germline 6 157206952 CGAGACTCCTCTGTGTACCATCGCGCACTGGCAGGACTCGCTGGCTAAGCGATGCATCTGT 148059333 358057 NM_001876.3(CPT1A):c.1163+1G>A CPT1A Mar 25, 2017 MedGen:C1829703,Orphanet:ORPHA156;MedGen:C0342789,OMIM:255120,SNOMED CT:238001003 Carnitine palmitoyl transferase 1 deficiency;Carnitine palmitoyltransferase I deficiency germline;unknown 11 68784814 CAGGCTGGCAGCCCTCACCGCAGGAGACAGGTGCGCAGCCTAGGTCCCTTGTCCTGTTTTG 376107921 213634 NM_000070.2(CAPN3):c.1319G>A (p.Arg440Gln) CAPN3 May 08, 2017 MedGen:C1869123,OMIM:253600,Orphanet:ORPHA267;MedGen:C1869123,OMIM:253600,Orphanet:ORPHA267;MedGen:CN517202 Limb-girdle muscular dystrophy, type 2A;Limb-girdle muscular dystrophy, type 2A;not provided germline;unknown 15 42399617 CAGTGTCTGTGAACGAGGGCCGCTGGGTACGGGGTTGCTCTGCCGGAGGCTGCCGCAACTT 151344523 20512 NM_006796.2(AFG3L2):c.2105G>A (p.Arg702Gln) AFG3L2 Sep 30, 2016 MedGen:C1853249,OMIM:610246,Orphanet:ORPHA101109;MedGen:CN517202 Spinocerebellar ataxia 28;not provided germline 18 12337411 CCACTGCAAGATTGATAGATGATGAAGTACGAATACTTATTAATGATGCTTATAAAAGAAC -1 468302 NM_002734.4(PRKAR1A):c.502+1G>A PRKAR1A May 15, 2017 MedGen:C2607929,OMIM:160980 Carney complex, type 1 germline 17 68524078 TTATCGCAGGAGAGACTGTGATTCAGCAAGGTAAGGGCCTCTGGAGCATGCAATATTGTTA 121912887 32426 NM_001844.4(COL2A1):c.3914G>A (p.Gly1305Asp) COL2A1 Sep 01, 2002 MedGen:C1852989 Vitreoretinopathy with phalangeal epiphyseal dysplasia germline 12 47974835 CAGGAGACTACTGGATTGACCCCAACCAAGGCTGCACCTTGGACGCCATGAAGGTTTTCTG 794726828 187788 NM_001165963.1(SCN1A):c.2929G>A (p.Val977Met) SCN1A Dec 20, 2014 MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002 Severe myoclonic epilepsy in infancy inherited 2 166037793 ATGTGCCTTACTGTCTTCATGATGGTCATGGTGATTGGAAACCTAGTGGTATGTACCCACT 76434661 53916 NM_004004.5(GJB2):c.416G>A (p.Ser139Asn) GJB2 Aug 28, 2017 MedGen:C1844678,OMIM:304400,Orphanet:ORPHA383;MedGen:C2675750,OMIM:601544;MedGen:C2675750,OMIM:601544;MedGen:C2673759,OMIM:220290;MedGen:C2673759,OMIM:220290;Human Phenotype Ontology:HP:0000365,MedGen:C0018772;MedGen:C1865234,OMIM:602540;MedGen:C1835678,OMIM:148210;MedGen:C1835672,OMIM:148350,Orphanet:ORPHA2202;MedGen:C0266004,OMIM:149200,Orphanet:ORPHA2698,SNOMED CT:1271009;MedGen:C0265964,OMIM:124500,Orphanet:ORPHA494,SNOMED CT:24559001;MedGen:CN043648,Orphanet:ORPHA87884;MedGen:CN517202;MedGen:CN169374 Deafness, X-linked 2;Deafness, autosomal dominant 3a;Deafness, autosomal dominant 3a;Deafness, autosomal recessive 1A;Deafness, autosomal recessive 1A;Hearing impairment;Hystrix-like ichthyosis with deafness;Keratitis-ichthyosis-deafness syndrome, autosomal dominant;Keratoderma palmoplantar deafness;Knuckle pads, deafness AND leukonychia syndrome;Mutilating keratoderma;Nonsyndromic hearing loss and deafness;not provided;not specified germline;unknown 13 20189166 AAGGCTCCCTGTGGTGGACCTACACAAGCAGCATCTTCTTCCGGGTCATCTTCGAAGCCGC 1085307188 414117 NM_001204.6(BMPR2):c.247+1G>A BMPR2 - MedGen:C0152171,OMIM:178600,SNOMED CT:26174007 Primary pulmonary hypertension germline 2 202464980 CAAAAGGGGACATAAATCTTGTAAAACAAGGCAAGTGATACTTTCCTTACCTGAAATGACT 863223542 209948 NM_000118.3(ENG):c.1428+1G>A ENG Aug 10, 2017 MedGen:C0039445,OMIM:187300,Orphanet:ORPHA774,SNOMED CT:21877004;MedGen:CN517202 Osler hemorrhagic telangiectasia syndrome;not provided germline 9 127818715 ATCGAGCCGGGGCAGCAGAGCTTTGTGCAGGTACCTGGCATGCCTGTCACCCCTCGGGCCT 770984846 214853 NM_016218.3(POLK):c.1284G>A (p.Ala428=) POLK Jan 01, 2013 Human Phenotype Ontology:HP:0012125,MedGen:C0376358,OMIM:176807,SNOMED CT:399068003 Malignant tumor of prostate somatic 5 75590368 TTCTAGGACATTCAGTGAGATAAATAAAGCGGAAGAGCAATACAGCCTATGTCAAGAACTT 730881702 181096 NM_007194.3(CHEK2):c.1356G>A (p.Trp452Ter) CHEK2 Jul 24, 2017 MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:CN517202 Familial cancer of breast;not provided germline 22 28695146 TGGAAAATACAACTTCATTCCTGAAGTCTGGGCAGAAGTCTCAGAGAAAGGTATGAATATG 587781288 150515 NM_000546.5(TP53):c.422G>A (p.Cys141Tyr) TP53 Jun 10, 2017 Human Phenotype Ontology:HP:0004808,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:ORPHA519,SNOMED CT:17788007;Human Phenotype Ontology:HP:0030078,MeSH:C538231,MedGen:C0152013;MedGen:C0007112;MeSH:D015179,MedGen:CN236642;MedGen:C0027672,SNOMED CT:699346009;MedGen:C0085390,Orphanet:ORPHA524,SNOMED CT:428850001;MedGen:C0153574,Orphanet:ORPHA213569;Human Phenotype Ontology:HP:0006775,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:ORPHA29073,SNOMED CT:109989006,SNOMED CT:55921005;Human Phenotype Ontology:HP:0030692,MeSH:D001932,MedGen:C0006118,SNOMED CT:126952004;Human Phenotype Ontology:HP:0100013,MeSH:D001943,MedGen:C1458155,Orphanet:ORPHA180250,SNOMED CT:126926005;Human Phenotype Ontology:HP:0006725,MedGen:C0281361;Human Phenotype Ontology:HP:0005584,MeSH:D002292,MedGen:C0007134,OMIM:605074,Orphanet:ORPHA217071,SNOMED CT:41607009;Human Phenotype Ontology:HP:0030359,MedGen:C0149782;MeSH:C535575,MedGen:C1168401,OMIM:275355,Orphanet:ORPHA67037 Acute myeloid leukemia;Adenocarcinoma of lung;Adenocarcinoma of prostate;Colorectal Neoplasms;Hereditary cancer-predisposing syndrome;Li-Fraumeni syndrome;Malignant neoplasm of body of uterus;Multiple myeloma;Neoplasm of brain;Neoplasm of the breast;Pancreatic adenocarcinoma;Renal cell carcinoma, papillary, 1;Squamous cell carcinoma of lung;Squamous cell carcinoma of the head and neck germline;somatic 17 7675190 ACAAGATGTTTTGCCAACTGGCCAAGACCTGCCCTGTGCAGCTGTGGGTTGATTCCACACC 886039072 482072 NM_000138.4(FBN1):c.3G>A (p.Met1Ile) FBN1 Dec 13, 2016 MedGen:CN517202 not provided germline 15 48644767 CGGCGGGAGCCGGTGGCGGCTCGGCATCATGCGTCGAGGGCGTCTGCTGGAGATCGCCCTG 727504255 172365 NM_001001430.2(TNNT2):c.244G>A (p.Gly82Arg) TNNT2 Mar 30, 2016 MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Primary familial hypertrophic cardiomyopathy;not provided germline 1 201365630 CCCAACTTGGTGCCTCCCAAGATCCCCGATGGAGAGAGAGTGGACTTTGATGTAAGCGGTG 879254011 244195 NM_014874.3(MFN2):c.1091G>A (p.Arg364Gln) MFN2 Oct 26, 2016 MedGen:CN043576;MedGen:CN517202 Charcot-Marie-Tooth disease, type 2;not provided germline 1 12002034 TGAAGACCAAGTTTGAGCAGCACACGGTCCGGGCCAAGCAGATTGCAGAGGCGGTTCGACT 62642057 24938 NM_000328.2(RPGR):c.823G>A (p.Gly275Ser) RPGR Jun 01, 2007 MedGen:C1848295,OMIM:300029;MedGen:CN517202 Retinitis pigmentosa 15;not provided germline X 38304746 ACCTTTGGGCTGGGACAATTTGGTCAGCTGGGTCTTGGCACTTTTCTTTTTGAAACTTCAG 267606671 20190 NM_020632.2(ATP6V0A4):c.2458G>A (p.Gly820Arg) ATP6V0A4 Sep 01, 2000 MedGen:C1864498,OMIM:602722,Orphanet:ORPHA402041 Renal tubular acidosis, distal, autosomal recessive germline 7 138706689 AGGGTTGAGTTCCAGAACAAGTTCTATGTCGGGGATGGTTACAAGTTTTCTCCATTCTCCT 786204762 186765 NM_019098.4(CNGB3):c.1119G>A (p.Trp373Ter) CNGB3 Mar 27, 2017 MedGen:C1849792,OMIM:262300;MedGen:CN517202 Achromatopsia 3;not provided germline;unknown 8 86643810 TCTGCACATTAATGCCTGTGTTTATTACTGGGCTTCAAACTATGAAGGAATTGGCACTACT 199473653 78465 NM_000891.2(KCNJ2):c.245G>A (p.Arg82Gln) KCNJ2 Jul 05, 2017 MedGen:C1563715,OMIM:170390,Orphanet:ORPHA37553,SNOMED CT:422348008;MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000 Andersen Tawil syndrome;Congenital long QT syndrome germline;unknown 17 70175284 TCTTCACCACGTGTGTGGACATTCGCTGGCGGTGGATGCTGGTTATCTTCTGCCTGGCTTT 118192163 28013 NM_000540.2(RYR1):c.6488G>A (p.Arg2163His) RYR1 Nov 09, 2015 MedGen:C0751951,OMIM:117000,Orphanet:ORPHA597,SNOMED CT:43152001;MedGen:CN031421,OMIM:145600;MedGen:CN517202 Central core disease;Malignant hyperthermia, susceptibility to, 1;not provided germline;unknown 19 38494565 TGAGCCTGCTCGAGTGCCTCGGCCAGATCCGCTCGCTGCTCATCGTGCAGATGGGCCCCCA 587779674 107178 NM_000090.3(COL3A1):c.2860G>A (p.Gly954Arg) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189004293 CCAGGCCCACTTGGGATTGCTGGGATCACTGGAGCACGGGGTCTTGCAGGACCACCAGGCA 121913502 29755 NM_002168.3(IDH2):c.419G>A (p.Arg140Gln) IDH2 Feb 16, 2018 Human Phenotype Ontology:HP:0004808,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:ORPHA519,SNOMED CT:17788007;MeSH:D015179,MedGen:CN236642;MedGen:C3150909,OMIM:613657;Human Phenotype Ontology:HP:0006775,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:ORPHA29073,SNOMED CT:109989006,SNOMED CT:55921005;MeSH:D009190,MedGen:C0026986,OMIM:614286;MeSH:C535575,MedGen:C1168401,OMIM:275355,Orphanet:ORPHA67037;MedGen:CN517202 Acute myeloid leukemia;Colorectal Neoplasms;D-2-hydroxyglutaric aciduria 2;Multiple myeloma;Myelodysplastic syndrome;Squamous cell carcinoma of the head and neck;not provided germline;somatic;unknown 15 90088702 AGATGTGGAAAAGTCCCAATGGAACTATCCGGAACATCCTGGGGGGGACTGTCTTCCGGGA 72549387 22776 NM_000104.3(CYP1B1):c.171G>A (p.Trp57Ter) CYP1B1 Apr 19, 2017 MedGen:C4310623,OMIM:617315;Human Phenotype Ontology:HP:0000557,MedGen:C0020302,OMIM:231300,Orphanet:ORPHA98976;MedGen:CN239260;Human Phenotype Ontology:HP:0000659,MedGen:C0344559,OMIM:604229,SNOMED CT:204153003;MedGen:CN517202 Anterior segment dysgenesis 6;Buphthalmos;CYP1B1-Related Disorders;Irido-corneo-trabecular dysgenesis;not provided germline;paternal 2 38075218 CCGGTCCGCGCCCCCGGGCCCGTTTGCGTGGCCACTGATCGGAAACGCGGCGGCGGTGGGC 116928232 199794 NM_000235.3(LIPA):c.894G>A (p.Gln298=) LIPA Sep 06, 2016 MedGen:C0043208,OMIM:278000,Orphanet:ORPHA275761;MedGen:CN517202 Lysosomal acid lipase deficiency;not provided germline;unknown 10 89222511 TTCTGTGCAAAACATGTTACACTGGAGCCAGGTAGGCATTCCAGGAGTGCATTTGGGGTTC 62638193 23044 NM_002905.3(RDH5):c.839G>A (p.Arg280His) RDH5 Nov 01, 2000 MedGen:C4016746 Fundus albipunctatus, autosomal recessive germline 12 55724427 ATGCCCTGACTGCTCGACACCCCCGAACCCGCTACAGCCCAGGTTGGGATGCCAAGCTGCT 483352886 136639 NM_000271.4(NPC1):c.1553G>A (p.Arg518Gln) NPC1 Jan 29, 2016 MedGen:C3179455,OMIM:257220 Niemann-Pick disease type C1 germline;unknown 18 23554758 ATTACCACACGCACTTTCTGTACTGCGTACGGTAAGTGGCAAGAGACAATCATTGGTAGAC 28937909 19062 NM_000152.4(GAA):c.1927G>A (p.Gly643Arg) GAA Sep 09, 2016 MedGen:CN568813;MedGen:C0017921,OMIM:232300,Orphanet:ORPHA365,SNOMED CT:124462004,SNOMED CT:237967002 Glycogen storage disease II, adult form;Glycogen storage disease, type II germline;unknown 17 80112914 CAGTTTAACCTGCTGGGGGTGCCTCTGGTCGGGGCCGACGTCTGCGGCTTCCTGGGCAACA -1 426111 NM_000138.4(FBN1):c.3091G>A (p.Glu1031Lys) FBN1 May 25, 2017 MedGen:CN517202 not provided germline 15 48488485 CCACATTTTCTTATTCTTGAAGATATCAATGAGTGCAAGATGATACCCAGCCTCTGCACCC 111033808 46843 NM_000155.3(GALT):c.998G>A (p.Arg333Gln) GALT Jan 21, 2016 MedGen:C0268151,OMIM:230400,Orphanet:ORPHA79239,SNOMED CT:124354006 Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase unknown 9 34649503 ACCCTCCGCTCCTGCGCTCTGCCACTGTCCGGAAATTCATGGTTGGCTACGAAATGCTTGC 587778871 132301 NM_000321.2(RB1):c.1960+5G>A RB1 Jan 16, 2018 Human Phenotype Ontology:HP:0009919,MeSH:D012175,MedGen:C0035335,OMIM:180200,Orphanet:ORPHA790;MedGen:CN517202 Retinoblastoma;not provided germline;somatic 13 48456354 CTCTCTTTCACTGTTTTATAAAAAAGGTTAGTAGATGATTATTTTCAAGAGCATGGACTCT 748275416 469404 NM_000159.3(GCDH):c.1064G>A (p.Arg355His) GCDH Jul 28, 2017 MedGen:C0268595,OMIM:231670,Orphanet:ORPHA25,SNOMED CT:360416003,SNOMED CT:76175005 Glutaric aciduria, type 1 germline 19 12897410 TGGGCCTTCACGCCTGCCTGCAGCTCGGCCGCTTGAAGGACCAGGACAAGTAGGGGCTGTG 121912983 31905 NM_000031.5(ALAD):c.820G>A (p.Ala274Thr) ALAD May 01, 1992 MedGen:C0268328,OMIM:612740,Orphanet:ORPHA95157,SNOMED CT:64081000 Porphobilinogen synthase deficiency germline 9 113389088 GCTTCCCTGCAGCACCCTGACCTCCCTCTCGCCGTGTACCACGTCTCTGGAGAGTTTGCCA 80358146 69139 NM_007294.3(BRCA1):c.213-1G>A BRCA1 Nov 01, 2015 MedGen:C2676676,OMIM:604370;Human Phenotype Ontology:HP:0100013,MeSH:D001943,MedGen:C1458155,Orphanet:ORPHA180250,SNOMED CT:126926005 Breast-ovarian cancer, familial 1;Neoplasm of the breast germline;somatic 17 43104957 TGAGTGTGTTTCTCAAACAATTTAATTTCAGGAGCCTACAAGAAAGTACGAGATTTAGTCA 137852615 24506 NM_000211.4(ITGB2):c.382G>A (p.Asp128Asn) ITGB2 May 15, 1992 MedGen:C0272187 Leukocyte adhesion deficiency germline 21 44903482 ACCTTCCGGCGGGCCAAGGGCTACCCCATCGACCTGTACTATCTGATGGACCTCTCCTACT 104893990 24338 NM_001024630.3(RUNX2):c.572G>A (p.Ser191Asn) RUNX2 Jul 01, 1997 MedGen:C0008928,OMIM:119600,Orphanet:ORPHA1452,SNOMED CT:65976001 Cleidocranial dysostosis germline 6 45432011 GGTTCAACGATCTGAGATTTGTGGGCCGGAGTGGACGAGGTAGGTCTCTGACTTTTGATAC 1060501039 400674 NM_000138.4(FBN1):c.4061G>A (p.Trp1354Ter) FBN1 Jul 14, 2016 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006 Marfan syndrome germline 15 48474554 GAAGCTTCAAATGTAGCTGCAGTCCCGGGTGGATTGGAGATGGCATTAAGTGCACTGGTGA 28937289 25312 NM_000132.3(F8):c.5336G>A (p.Gly1779Glu) F8 Dec 01, 1993 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154906457 GAGAACTAAATGAACATTTGGGACTCCTGGGGCCATATATAAGAGCAGAAGTTGAAGATAA 398124545 102396 NM_152419.2(HGSNAT):c.1464+1G>A HGSNAT Jun 18, 2013 MedGen:CN517202 not provided germline 8 43193844 TCCATCGTGATGGCCTTTTTAGGAGTTCAGGTATTTGTTCATTTCATTAGGTTACTTTTTC 121908301 19349 NM_001005741.2(GBA):c.1549G>A (p.Gly517Ser) GBA Jun 15, 1993 MedGen:C1961835,OMIM:230800,SNOMED CT:62201009 Gaucher's disease, type 1 germline 1 155235057 GTGCCTCTTACCATCAAGGATCCTGCTGTGGGCTTCCTGGAGACAATCTCACCTGGCTACT 781065280 439706 NM_005956.3(MTHFD1):c.727+1G>A MTHFD1 Nov 21, 2017 MedGen:CN635903,OMIM:617780 COMBINED IMMUNODEFICIENCY AND MEGALOBLASTIC ANEMIA WITH OR WITHOUT HYPERHOMOCYSTEINEMIA germline 14 64419926 TCATCGACTGTGGAATCAATTATGTCCCAGGTGAGTGTTGTTGGAGGAGTAAGGTGGCTGC 761211705 264570 NM_000070.2(CAPN3):c.802-9G>A CAPN3 Jun 14, 2016 MedGen:C1869123,OMIM:253600,Orphanet:ORPHA267;MedGen:CN517202 Limb-girdle muscular dystrophy, type 2A;not provided germline 15 42389944 TCCCCTGTGTTGTTCCCTACATTCTCCATCGGGCCTCAGGATGGCACGAACATGACCTATG 63749817 199868 NM_002087.3(GRN):c.708+1G>A GRN Feb 28, 2017 Human Phenotype Ontology:HP:0002145,MedGen:C0338451,OMIM:600274,Orphanet:ORPHA282,SNOMED CT:230270009;MedGen:C1843792,OMIM:607485;MedGen:CN517202 Frontotemporal dementia;Frontotemporal dementia, ubiquitin-positive;not provided germline 17 44350801 GGGAAGTATGGCTGCTGCCCAATGCCCAACGTGAGTGAGGGGCTGGAGCCAGCTTGGCTGT 748014296 404689 NM_177965.3(C8orf37):c.555G>A (p.Trp185Ter) C8orf37 Mar 28, 2017 MedGen:CN121949 Retinitis pigmentosa 64 germline 8 95247686 AACACGGGCATATGCCTGCCAGTGTAGCTGGAGAACTATTGAAGAAGTGACTGACCTTCAG 121907929 18522 NM_000280.4(PAX6):c.771G>A (p.Trp257Ter) PAX6 Aug 01, 2007 MedGen:C0344542,OMIM:106210 Aniridia 1 germline 11 31793797 CTAACCTGTCCCACCTGATTTCCAGGTATGGTTTTCTAATCGAAGGGCCAAATGGAGAAGA 267607592 77750 NM_170707.3(LMNA):c.1608+1G>A LMNA Sep 10, 2014 Human Phenotype Ontology:HP:0006785,MedGen:C0686353,Orphanet:ORPHA263,SNOMED CT:93153005;MedGen:CN517202 Limb-girdle muscular dystrophy;not provided germline 1 156137233 CGTACGGCTCTCATCAACTCCACTGGGGAAGTAAGTAGGCCTGGGCCTGGCTGCTTGCTGG 104886244 35992 NM_000495.4(COL4A5):c.3586G>A (p.Gly1196Arg) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108667165 CAACCAGGCTTTGGAAACCCAGGACCCCCTGGACTTCCAGGACTTTCTGGTAAACCTTAAT 121913294 362911 NM_000314.6(PTEN):c.518G>A (p.Arg173His) PTEN Apr 27, 2017 Human Phenotype Ontology:HP:0030692,MeSH:D001932,MedGen:C0006118,SNOMED CT:126952004;MedGen:C1959582,OMIM:601728,Orphanet:ORPHA306498;MedGen:CN517202 Neoplasm of brain;PTEN hamartoma tumor syndrome;not provided germline;maternal;paternal;somatic;unknown 10 87952143 ACCAGGGAGTAACTATTCCCAGTCAGAGGCGCTATGTGTATTATTATAGCTACCTGTTAAA 72544145 75312 NM_004588.4(SCN2B):c.83G>A (p.Arg28Gln) SCN2B Jun 01, 2009 MedGen:C3809312,OMIM:615378 Atrial fibrillation, familial, 14 germline 11 118168739 TTGTGGCTTCATCTGCAGTGCCACCAGGACGGAGCATGGAGGTCACAGTACCTGCCACCCT 863225080 214565 NM_006245.3(PPP2R5D):c.1258G>A (p.Glu420Lys) PPP2R5D Oct 17, 2015 MedGen:CN517202 not provided germline 6 43009328 ACCGAGTCTGCCTCTCCCCACCAGGTGGCAGAGCGTGCTCTCTATTACTGGAACAATGAGT 587783849 170006 NM_000252.2(MTM1):c.678+1G>A MTM1 Feb 08, 2013 MedGen:C0410203,OMIM:310400,Orphanet:ORPHA596,SNOMED CT:46804001 Severe X-linked myotubular myopathy germline X 150641419 GCAACTTTTAGGTCCCGAAATCGAATTCCAGTGAGTACTGCAATTAACGTTTCTCTTGAAG 387907003 39718 NM_001134831.1(AHI1):c.1484G>A (p.Arg495His) AHI1 Sep 21, 2011 MedGen:C1837713,OMIM:608629 Joubert syndrome 3 germline 6 135448432 ATGGAAATGCAAACATCAACTCAAAACTTCGCTTGCAGCTATATTACCCACCTACTAAGCC 587779417 106847 NM_000090.3(COL3A1):c.2600G>A (p.Gly867Asp) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189003457 AAGGTGTCAAAGGTGAACGTGGCAGTCCTGGTGGACCTGTAAGTATTGATCCTCTTAACTA 121912557 23616 NM_004999.3(MYO6):c.1325G>A (p.Cys442Tyr) MYO6 Jul 09, 2004 MedGen:C1853441,OMIM:606346 Deafness, autosomal dominant 22 germline 6 75857198 TTGATCATGTGGTAAACAGAGTAAATCAGTGTTTTCCTTTTGAAACATCATCCTATTTTAT 397514582 48361 NM_172107.3(KCNQ2):c.869G>A (p.Gly290Asp) KCNQ2 Jun 13, 2017 MedGen:C1852587,OMIM:121200;MedGen:C3150986,OMIM:613720,Orphanet:ORPHA439218;MedGen:CN517202 Benign familial neonatal seizures 1;Early infantile epileptic encephalopathy 7;not provided germline 20 63439656 ACGGGGACAAGTACCCCCAGACCTGGAACGGCAGGCTCCTTGCGGCAACCTTCACCCTCAT 121912517 29455 NM_000894.2(LHB):c.167G>A (p.Gly56Asp) LHB Jan 01, 2009 MedGen:C0271582,OMIM:228300,Orphanet:ORPHA325448,SNOMED CT:8829008 Isolated lutropin deficiency germline 19 49016563 GCATCACCGTCAACACCACCATCTGTGCCGGCTACTGCCCCACCATGGTGAGCTGCCTGGG 1057517028 357507 NM_012434.4(SLC17A5):c.819+1G>A SLC17A5 Jul 06, 2016 MedGen:C1096903,OMIM:604369,Orphanet:ORPHA309334,SNOMED CT:87074006;MedGen:CN517202 Salla disease;not provided germline;unknown 6 73635381 GAATACATTCTTTCATCATTAAGAAATCAGGTATGGACTTTGACACATTTTAAAAATAATG 780855765 440158 NM_001080463.1(DYNC2H1):c.6545G>A (p.Cys2182Tyr) DYNC2H1 Jun 01, 2017 MedGen:CN674505 Short-rib polydactyly syndrome type III unknown 11 103184963 TGATGAATGGTTTGTCACATCTACATGGTTGCAGAGATCATGACGAATTCATTATTAATCT 28942083 18728 NM_000527.4(LDLR):c.2000G>A (p.Cys667Tyr) LDLR Sep 21, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000;MedGen:CN517202 Familial hypercholesterolemia;not provided germline 19 11120382 CCGCTTCTTCTGCCCCAGGAGTGAACTGGTGTGAGAGGACCACCCTGAGCAATGGCGGCTG 551660089 374322 NM_173201.3(ATP2A1):c.1184+1G>A ATP2A1 Jan 03, 2017 MedGen:CN517202 not provided germline 16 28894244 CGGCTCCACTTACGCTCCAGAGGGAGAGGTGTAAGTCACCCAGGCATCTTCTCCCCAGCTC 121918464 28375 NM_002834.4(PTPN11):c.226G>A (p.Glu76Lys) PTPN11 May 31, 2016 Human Phenotype Ontology:HP:0009592,MeSH:D001254,MedGen:C0004114,Orphanet:ORPHA94,SNOMED CT:38713004;MeSH:D015179,MedGen:CN236642;Human Phenotype Ontology:HP:0012209,MedGen:C0349639,OMIM:607785,Orphanet:ORPHA86834;Human Phenotype Ontology:HP:0006775,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:ORPHA29073,SNOMED CT:109989006,SNOMED CT:55921005;Human Phenotype Ontology:HP:0003006,MeSH:D009447,MedGen:C0027819,OMIM:256700;MeSH:D009634,MedGen:C0028326,Orphanet:ORPHA648,SNOMED CT:205824006;MedGen:CN166718,Orphanet:ORPHA98733;Human Phenotype Ontology:HP:0030359,MedGen:C0149782;MedGen:CN517202 Astrocytoma;Colorectal Neoplasms;Juvenile myelomonocytic leukemia;Multiple myeloma;Neuroblastoma;Noonan syndrome;Rasopathy;Squamous cell carcinoma of lung;not provided germline;somatic;unknown 12 112450406 TATGGAGGGGAGAAATTTGCCACTTTGGCTGAGTTGGTCCAGTATTACATGGAACATCACG 72656370 259882 NM_000089.3(COL1A2):c.577G>A (p.Gly193Ser) COL1A2 Feb 02, 2017 MedGen:C0023931,OMIM:166200,SNOMED CT:385482004;MedGen:CN517202 Osteogenesis imperfecta type I;not provided germline;maternal;paternal 7 94406286 AATGGTCTGGATGGATTGAAGGGACAGCCCGGTGCTCCTGGTGTGAAGGTAAATATTAAAT 748704459 186790 NM_001128227.2(GNE):c.479G>A (p.Arg160Gln) GNE May 31, 2017 MedGen:C1833373,OMIM:600737 Inclusion body myopathy 2 germline;unknown 9 36246261 TGGCCACATCTGCTGCCTTGATGAACATCCGAATCCTTCACATTGAAGGTGGGGAAGTCAG 281874737 35611 NM_000495.4(COL4A5):c.431G>A (p.Gly144Asp) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108571459 CAGGCAGTCCCGGTTTTCCTGGTTTACAGGGTCCTCCAGTAAGTTATAAAATTTGGGATTA 1085307614 415362 NM_001845.5(COL4A1):c.3760G>A (p.Gly1254Arg) COL4A1 Apr 18, 2017 MedGen:CN517202 not provided germline 13 110169745 TCTCTTCCATTAGGACTTCCGGGACCCATGGGGCCTCCAGGGCTTCCTGGGATTGATGGAG 786205745 188541 NM_001167625.1(CACNA1C):c.1216G>A (p.Gly406Arg) CACNA1C Jul 16, 2015 MedGen:C1832916,OMIM:601005,Orphanet:ORPHA65283;MedGen:CN517202 Timothy syndrome;not provided germline 12 2504538 GTTCTAAATCTGGTTCTCGGTGTGTTGAGCGGGTAAGCTGACCGTTTCTATGTCCTCTCCA 181134220 27020 NM_000481.3(AMT):c.878-1G>A AMT Jul 11, 2013 Human Phenotype Ontology:HP:0008288,MedGen:C0751748,OMIM:605899,Orphanet:ORPHA407,SNOMED CT:237939006 Non-ketotic hyperglycinemia germline 3 49417974 TGTGGCTTATGTCTCATGTGTCATTCTCCAGGGAAGCGCCGCCGAGCTGCTATGGACTTCC 387907570 70787 NM_000243.2(MEFV):c.2060G>A (p.Gly687Asp) MEFV May 26, 2015 MedGen:C0031069,OMIM:249100,Orphanet:ORPHA342,SNOMED CT:12579009;MedGen:CN517202 Familial Mediterranean fever;not provided germline;somatic 16 3243427 AAGGGAACATGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAA 104893779 28062 NM_000539.3(RHO):c.568G>A (p.Asp190Asn) RHO Sep 01, 1991 MedGen:C3151001,OMIM:613731 Retinitis pigmentosa 4 germline 3 129532288 CCCGAGGGCCTGCAGTGCTCGTGTGGAATCGACTACTACACGCTCAAGCCGGAGGTCAACA 886037755 213939 NM_003990.4(PAX2):c.187G>A (p.Gly63Ser) PAX2 Oct 19, 2015 MedGen:CN517202 not provided somatic 10 100749889 GACATCTCCCGGCAGCTGCGGGTCAGCCACGGCTGTGTCAGCAAAATCCTGGGCAGGTGAG 121908471 20841 NM_139025.4(ADAMTS13):c.1193G>A (p.Arg398His) ADAMTS13 Oct 04, 2001 MedGen:C1268935,OMIM:274150,Orphanet:ORPHA93583,SNOMED CT:373420004 Upshaw-Schulman syndrome germline 9 133433478 CTAGCTGGGGTCCCCGAAGTCCTTGCTCCCGCTCCTGCGGAGGAGGTGTGGTCACCAGGAG 104886116 35749 NM_000495.4(COL4A5):c.1414G>A (p.Gly472Arg) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108591635 CCAGGTGATAAAGGACTCCAAGGAGAACAAGGAGTGAAAGGTTTGATCTCCAAACATATTC 387906756 39035 NM_001698.2(AUH):c.650G>A (p.Gly217Asp) AUH Sep 21, 2010 MedGen:C0342727,OMIM:250950,Orphanet:ORPHA67046,SNOMED CT:237950009 3-Methylglutaconic aciduria germline 9 91296026 TGGTTGAAACAAAATTGGCGATTATTCCTGGTGGAGGTATGAGTAGTTCACGCCCATTCCT 397509417 75097 NM_021942.5(TRAPPC11):c.2938G>A (p.Gly980Arg) TRAPPC11 Jul 11, 2013 MedGen:C3809236,OMIM:615356 Limb-girdle muscular dystrophy, type 2S germline 4 183701783 CTTGGAAATATTGAAGGTGGAGTAGCAACCGGGCATTATATTATCTCTTGGAAAAGGTAAG 104894430 21034 NM_014252.3(SLC25A15):c.79G>A (p.Gly27Arg) SLC25A15 Jun 29, 2017 MedGen:C0268540,OMIM:238970,Orphanet:ORPHA415,SNOMED CT:30287008 Hyperornithinemia-hyperammonemia-homocitrullinuria syndrome germline 13 40799080 ATTGCAGGAGGTACAGCATGTGTACTGACCGGGCAGCCCTTTGACACAATGAAAGTGAAGA 879253825 224653 NM_000255.3(MUT):c.129G>A (p.Trp43Ter) MUT - MedGen:C1855114,OMIM:251000 Methylmalonic aciduria due to methylmalonyl-CoA mutase deficiency germline 6 49459338 ACACCAGCAACAGCCCCTTCACCCAGAATGGGCTGCCCTGGCTAAAAAGCAGCTGAAAGGC 104893863 15529 NM_000320.2(QDPR):c.68G>A (p.Gly23Asp) QDPR Jun 01, 1993 MedGen:C0268465,OMIM:261630,Orphanet:ORPHA226,SNOMED CT:58256000 Dihydropteridine reductase deficiency germline 4 17511987 TGCTGGTGTACGGCGGCAGGGGCGCTCTGGGTTCTCGATGCGTGCAGGCTTTTCGGGCCCG 68058881 103051 NM_000531.5(OTC):c.298+1G>A OTC Jun 20, 2017 MedGen:C0268542,OMIM:311250,Orphanet:ORPHA664,SNOMED CT:80908008;MedGen:CN517202 Ornithine carbamoyltransferase deficiency;not provided germline;unknown X 38369878 GTACTCGAACAAGATTGTCTACAGAAACAGGTAAGTCCACTGCCAAATTCACACTTGTGTT 104893914 31196 NM_001018077.1(NR3C1):c.2035G>A (p.Gly679Ser) NR3C1 Apr 01, 2006 MedGen:C1841972,OMIM:615962,Orphanet:ORPHA786 Glucocorticoid resistance, generalized germline 5 143282714 CTTCATCTTAACCTTTTAGTTCCTAAGGACGGTCTGAAGAGCCAAGAGCTATTTGATGAAA 886039329 259769 NM_000094.3(COL7A1):c.8012G>A (p.Gly2671Glu) COL7A1 Nov 23, 2015 MedGen:CN517202 not provided germline 3 48567608 AGGGGGAGCCTGGTGTGCCGGGCCAGTCGGGGGCCCCTGGCAAGGAGGGCCTGATCGGTCC 863225090 214083 NM_005183.3(CACNA1F):c.2542G>A (p.Gly848Ser) CACNA1F Jun 11, 2013 MedGen:C1845407,OMIM:300476 Cone-rod dystrophy X-linked 3 germline X 49219668 CCCAAGGAGAAGGTGGTACCCATCCCTGAGGGCAGCGCCTTCTTCTGCCTCAGCCAAACCA 1064796702 410731 NM_000214.2(JAG1):c.863G>A (p.Trp288Ter) JAG1 Feb 22, 2017 MedGen:CN517202 not provided germline 20 10652491 AGCCCTGGCAGTGCCTCTGTGAGACCAACTGGGGCGGCCAGCTCTGTGACAAAGGTATGGC 796053521 204229 NM_052859.3(RFT1):c.892G>A (p.Glu298Lys) RFT1 Oct 01, 2009 MedGen:C2677590,OMIM:612015,Orphanet:ORPHA244310 Congenital disorder of glycosylation type 1N germline 3 53105738 GTGGCCAGATTAATTTTCCAGCCAATAGAGGAAAGTTTTTATATATTTTTTGCTAAGGTGC 140593 175987 NM_000138.4(FBN1):c.3037G>A (p.Gly1013Arg) FBN1 Aug 02, 2016 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:CN517202 Marfan syndrome;not provided germline 15 48489896 GAGTACGAGGAGCTGTGTCCGAGAGGACCCGGATTTGCCACAAAAGAAATTACAAATGGAA 746549806 223295 NM_015160.2(PMPCA):c.766G>A (p.Val256Met) PMPCA Oct 12, 2016 MedGen:C1859298,OMIM:213200,Orphanet:ORPHA1170 Spinocerebellar ataxia, autosomal recessive 2 germline 9 136417083 TACACTCCCGACCGCATGGTGCTGGCCGGCGTGGGCGTGGAGCACGAGCATCTGGTGGACT 104894385 17604 NM_006493.2(CLN5):c.225G>A (p.Trp75Ter) CLN5 Aug 01, 2013 MedGen:C1850442,OMIM:256731,Orphanet:ORPHA228360 Ceroid lipofuscinosis neuronal 5 germline 13 76992176 CGCGGGCGCGGCTCGGGGACGCGCTTCCTGGTGCTGGGCCCTGGCGCTGCTTTGGCTCGCG 749070370 353971 NM_172107.3(KCNQ2):c.1956G>A (p.Pro652=) KCNQ2 Mar 31, 2016 MedGen:C3150986,OMIM:613720,Orphanet:ORPHA439218 Early infantile epileptic encephalopathy 7 germline 20 63407307 TATCTACATGCAGCGGATGGGCATCCCCCCGACAGAGACCGAGGCCTACTTTGGGGCCAAA 281874671 47361 NM_000495.4(COL4A5):c.1589G>A (p.Gly530Asp) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108597378 TTTTTTCTTTTTTTCCTTACTCATTTCAGGGCATTCCAGGAGCTCCAGGTGCTCCAGGCTT 727503988 177801 NM_003482.3(KMT2D):c.2797+1G>A KMT2D Jan 17, 2014 MedGen:CN030661,OMIM:147920 Kabuki syndrome 1 germline 12 49050885 CATCCTTGTCGCCTCAGCTGATGCCACCAGGTAAGGGGATGTTAGTACTCTGTTATTCTGG 74315460 18100 NM_000487.5(ARSA):c.263G>A (p.Gly88Asp) ARSA Jan 01, 1994 MedGen:C4017094 Metachromatic leukodystrophy, severe germline 22 50627368 TCCTGACCGGCCGGCTCCCGGTTCGGATGGGCATGTACCCTGGCGTCCTGGTGCCCAGCTC 756039188 243266 NM_000527.4(LDLR):c.12G>A (p.Trp4Ter) LDLR Mar 30, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11089560 CCTGGCAGAGGCTGCGAGCATGGGGCCCTGGGGCTGGAAATTGCGCTGGACCGTCGCCTTG 121908753 22237 NM_000492.3(CFTR):c.1055G>A (p.Arg352Gln) CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline;unknown 7 117540285 TCTGCATTGTTCTGCGCATGGCGGTCACTCGGCAATTTCCCTGGGCTGTACAAACATGGTA 104886186 35877 NM_000495.4(COL4A5):c.2554G>A (p.Gly852Arg) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108620303 CCAGGAGAGAAGGGGGATCCAGGACCTCCTGGACTTGATGTTCCAGGACCCCCAGGTGAAA -1 444363 NM_000118.3(ENG):c.67+1G>A ENG May 05, 2016 MedGen:CN517202 not provided germline 9 127854288 TGCTGGCCAGCTGCAGCCTCAGCCCCACAAGTAGGTGTCCAGGGACCCAGGGTGGGGAGAC 113994033 19156 NM_001034116.1(EIF2B4):c.1070G>A (p.Arg357Gln) EIF2B4 Feb 01, 2002 MedGen:C1858991,OMIM:603896,Orphanet:ORPHA99854 Leukoencephalopathy with vanishing white matter germline 2 27366880 AGGAGGCTTGGACAGAGGGCCGGCGGTTTCGGGTGGTAGTGGTGGACAGCCGGCCATGGCT 121912655 27393 NM_000546.5(TP53):c.725G>A (p.Cys242Tyr) TP53 Jul 06, 2017 Human Phenotype Ontology:HP:0030078,MeSH:C538231,MedGen:C0152013;MedGen:C0278701;Human Phenotype Ontology:HP:0011459,MedGen:C0152018,Orphanet:ORPHA70482;Human Phenotype Ontology:HP:0005550,MeSH:D015451,MedGen:C0023434,OMIM:151400,SNOMED CT:277473004,SNOMED CT:51092000;Human Phenotype Ontology:HP:0100843,MeSH:D005909,MedGen:C0017636,SNOMED CT:63634009;MedGen:C2239176,OMIM:114550,Orphanet:ORPHA88673,SNOMED CT:187769009,SNOMED CT:25370001;MedGen:C0027672,SNOMED CT:699346009;MedGen:C0085390,Orphanet:ORPHA524,SNOMED CT:428850001;MedGen:C2675080;Human Phenotype Ontology:HP:0100013,MeSH:D001943,MedGen:C1458155,Orphanet:ORPHA180250,SNOMED CT:126926005;Human Phenotype Ontology:HP:0030359,MedGen:C0149782;MeSH:C535575,MedGen:C1168401,OMIM:275355,Orphanet:ORPHA67037;Human Phenotype Ontology:HP:0006740,MedGen:C0279680;MedGen:C0280630 Adenocarcinoma of lung;Adenocarcinoma of stomach;Carcinoma of esophagus;Chronic lymphocytic leukemia;Glioblastoma;Hepatocellular carcinoma;Hereditary cancer-predisposing syndrome;Li-Fraumeni syndrome;Li-Fraumeni-like syndrome;Neoplasm of the breast;Squamous cell carcinoma of lung;Squamous cell carcinoma of the head and neck;Transitional cell carcinoma of the bladder;Uterine Carcinosarcoma germline;somatic 17 7674238 TCCACTACAACTACATGTGTAACAGTTCCTGCATGGGCGGCATGAACCGGAGGCCCATCCT 886041015 263157 NM_006087.3(TUBB4A):c.1054G>A (p.Ala352Thr) TUBB4A Jul 05, 2016 MedGen:C2676244,OMIM:612438,Orphanet:ORPHA139441 Leukodystrophy, hypomyelinating, 6 germline 19 6495445 GTGGAGTGGATCCCCAACAACGTGAAGACGGCCGTGTGCGACATCCCGCCCCGCGGCCTGA 200382776 205564 NM_080860.3(RSPH1):c.727+5G>A (p.Ala244ValfsTer22) RSPH1 Sep 03, 2015 MedGen:C0022521,OMIM:244400,Orphanet:ORPHA98861,SNOMED CT:42402006 Kartagener syndrome germline 21 42477286 TGGCCAAGACGCTCCAGGAGCTGAGAGTGTGGGGCACCCCCGGGCTGTGGGGTGGAGGGGG 104893697 23365 NM_000388.3(CASR):c.571G>A (p.Glu191Lys) CASR Oct 10, 1996 MedGen:C0342345,OMIM:601198 Hypocalcemia, autosomal dominant 1 germline 3 122261606 AAGTCTTTCCTCCGAACCATCCCCAATGATGAGCACCAGGCCACTGCCATGGCAGACATCA 377767356 36184 NM_005359.5(SMAD4):c.1168G>A (p.Glu390Lys) SMAD4 Dec 04, 2012 MedGen:C0345893,OMIM:174900,Orphanet:ORPHA329971,SNOMED CT:9273005 Juvenile polyposis syndrome not provided 18 51067047 AGGTTGCACATAGGCAAAGGTGTGCAGTTGGAATGTAAAGGTGAAGGTGATGTTTGGGTCA 398124208 101189 NM_005609.3(PYGM):c.1366G>A (p.Val456Met) PYGM Sep 04, 2014 MedGen:C0017924,OMIM:232600,Orphanet:ORPHA368,SNOMED CT:55912009 Glycogen storage disease, type V germline;unknown 11 64753556 TGCATCGCGGGGTCGCACGCCGTCAACGGCGTGGCGCGCATCCACTCCGAGATCCTCAAGA 28936069 26748 NM_004429.4(EFNB1):c.451G>A (p.Gly151Ser) EFNB1 Jun 08, 2004 MedGen:C0220767,OMIM:304110 Craniofrontonasal dysplasia germline X 68839708 AGCCTGGAGGGGCTGGAAAACCGGGAGGGCGGTGTGTGCCGCACACGCACCATGAAGATCA 121909736 31166 NM_005271.4(GLUD1):c.953G>A (p.Arg318Lys) GLUD1 Jan 01, 2000 MedGen:C1847555,OMIM:606762,Orphanet:ORPHA35878 Hyperinsulinism-hyperammonemia syndrome germline 10 87061021 GATTTGGTAATGTGGGCCTACACTCTATGAGATATTTACATCGTTTTGGTGCTAAATGTAT -1 444317 NM_017890.4(VPS13B):c.6030G>A (p.Trp2010Ter) VPS13B Aug 31, 2017 MedGen:CN517202 not provided germline 8 99661400 GCCTGAAGCCCTTGATTATTGCACTGTTTGGCTACAGACAGTGCCTGGAGAAATAGACAGC -1 439637 NM_013335.3(GMPPA):c.853+1G>A GMPPA - MedGen:C3809738,OMIM:615510 Alacrima, achalasia, and mental retardation syndrome germline 2 219505556 AGCACACCCCAGGGGGCCCATGGATCCGAGGTACCCAGCCTGCCCCAATTCCTAACCTTTG 104886451 35678 NM_000495.4(COL4A5):c.891+1G>A COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108580739 AAGGGTGAGCAAGGAGAGCCAGGCAAAAGAGTAAGTGATGTAACTGCTAATATTCTTTGCA 119103288 17537 NM_000127.2(EXT1):c.1016G>A (p.Gly339Asp) EXT1 Jun 01, 1998 Human Phenotype Ontology:HP:0002762,MedGen:C0015306,OMIM:133700,SNOMED CT:254044004 Multiple congenital exostosis germline 8 117837148 ACAATGCCACTTTCTGTCTGGTTCCTCGTGGTCGCAGGCTTGGGTCCTTCAGATTCCTGGA 137852621 24474 NM_000023.3(SGCA):c.293G>A (p.Arg98His) SGCA Apr 17, 2017 MedGen:C2936332,OMIM:608099,Orphanet:ORPHA62 Limb-girdle muscular dystrophy, type 2D germline;unknown 17 50167717 TCCTCTACGGCTCTGCCACCCCAGAAGATCGTGGGCTCCAGGTCATTGAGGTGCCGTCAGG 104894612 21738 NM_005450.4(NOG):c.551G>A (p.Cys184Tyr) NOG Dec 01, 2001 Human Phenotype Ontology:HP:0100264,MedGen:C1861385,OMIM:185800,Orphanet:ORPHA3250 Cushing's symphalangism germline 17 56594774 AGGTGGGCAGCTGCTTCAGTAAGCGCTCGTGCTCCGTGCCCGAGGGCATGGTGTGCAAGCC 587779421 106852 NM_000090.3(COL3A1):c.1916G>A (p.Gly639Glu) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188997746 AAGGAGACACAGGACCCCCTGGTCCACAAGGATTACAAGTAAGAACTTGTTATTTAAATGT 267607934 96680 NM_000251.2(MSH2):c.792+1G>A MSH2 Sep 05, 2013 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Lynch syndrome germline 2 47412561 AGTGCTGTATTGCCAGAAATGGAGAATCAGGTACATGGATTATAAATGTGAATTACAATAT 137852500 25114 NM_000194.2(HPRT1):c.172G>A (p.Gly58Arg) HPRT1 May 12, 2011 na;MedGen:C0268117,OMIM:300323,Orphanet:ORPHA79233,SNOMED CT:238007004 HPRT TOOWONG;Partial hypoxanthine-guanine phosphoribosyltransferase deficiency germline X 134475218 CGTCTTGCTCGAGATGTGATGAAGGAGATGGGAGGCCATCACATTGTAGCCCTCTGTGTGC 111033730 36558 NM_000155.3(GALT):c.595G>A (p.Ala199Thr) GALT Dec 04, 2012 MedGen:C0268151,OMIM:230400,Orphanet:ORPHA79239,SNOMED CT:124354006 Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase not provided 9 34648364 GTATGGGCCAGCAGTTTCCTGCCAGATATTGCCCAGCGTGAGGAGCGATCTCAGCAGGCCT 76857106 19680 NM_006397.2(RNASEH2A):c.109G>A (p.Gly37Ser) RNASEH2A Mar 13, 2014 MedGen:C1835912,OMIM:610333 Aicardi Goutieres syndrome 4 germline 19 12806782 GAGCCTTGCGTCCTGGGCGTCGATGAGGCGGGCAGGGGCCCCGTGCTGGGTGCGCCCCTAG 121908453 20892 NM_022336.3(EDAR):c.1259G>A (p.Arg420Gln) EDAR Jul 25, 2016 MedGen:C1720965,OMIM:129490;MedGen:C3551587;MedGen:CN517202 Autosomal dominant hypohidrotic ectodermal dysplasia;Ectodermal dysplasia 10a, hypohidrotic/hair/tooth type, autosomal dominant;not provided germline 2 108896995 AGCTACTCACAAAACTGGTGCAGATTGAGCGGCTGGATGCTGTGGAGTCCTTGTGTGCAGA 587779540 106990 NM_000090.3(COL3A1):c.3167G>A (p.Gly1056Asp) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189006418 CTGGTCATCCAGGCCCACCTGGTCCTGTCGGTCCAGCTGGAAAGAGTGGTGACAGAGGAGA 146405172 191634 NM_000392.4(ABCC2):c.1967+1G>A ABCC2 Feb 04, 2015 MedGen:C0022350,OMIM:237500,Orphanet:ORPHA234,SNOMED CT:44553005 Dubin-Johnson syndrome germline 10 99811603 GGAACATGATTCGGAAGCCACAGTCCGAGAGTGAGTTGCCTTCTTTCCATCCTAATGTTCT 747446711 472490 NM_000465.3(BARD1):c.1886G>A (p.Trp629Ter) BARD1 Jun 23, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 2 214745084 AGTGTATGCTTGGGATTCTCAATGGATGCTGGATTCTAAAATTTGAATGTAAGTGTTGGAT 587777511 143243 NM_006439.4(MAB21L2):c.152G>A (p.Arg51His) MAB21L2 Jun 05, 2015 MedGen:C4014540,OMIM:615877,Orphanet:ORPHA424099 Microphthalmia/coloboma and skeletal dysplasia syndrome de novo;germline 4 150583181 TGCTCAAGGAAGTGGAGGTGCAGGAGCCTCGCTTCATCAGCTCCTTGAGCGAGATCGATGC 142439390 445074 NM_001038.5(SCNN1A):c.875+1G>A SCNN1A Jun 28, 2017 MedGen:CN517202 not provided germline 12 6362050 CCGCTTCAACCAGGTCTCCTGCAACCAGGCGTGAGTCAGTCCTGCCTGGCTCCTTGCTCTC 1060501077 400143 NM_000138.4(FBN1):c.7466G>A (p.Cys2489Tyr) FBN1 May 13, 2016 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006 Marfan syndrome germline 15 48422056 TCTTGCATTTTCTTGTAGATCTTGATGAGTGTGCAACCAAGCAACACAACTGCCAGTTCCT 121918296 17748 NM_178443.2(FERMT3):c.48G>A (p.Trp16Ter) FERMT3 Mar 01, 2009 MedGen:C2748536,OMIM:612840,Orphanet:ORPHA99844 Leukocyte adhesion deficiency, type III germline 11 64207412 AGCCTCCGGGGACTACATCGACTCGTCATGGGAGCTGCGGGTGTTTGTGGGAGAGGAGGAC 397509412 70509 NM_001376.4(DYNC1H1):c.10031G>A (p.Arg3344Gln) DYNC1H1 Jun 01, 2013 MedGen:C3281202,OMIM:614563 Mental retardation, autosomal dominant 13 germline 14 102032419 ACTGGAAGCAGATCCGCTCCATCATCATGCGGGAGAACTTCATCCCCACCATCGTCAACTT 863223403 209408 NM_002140.4(HNRNPK):c.257G>A (p.Arg86His) HNRNPK Oct 01, 2015 MedGen:C4225274,OMIM:616580;MedGen:CN517202 AU-KLINE SYNDROME;not provided de novo;germline 9 83975462 TTTCAGTCCCAGACAGCAGTGGCCCCGAGCGGTATGTCCCAACAGTTTATGCCTCACTGCC 377546036 39975 NM_001159772.1(CANT1):c.676G>A (p.Val226Met) CANT1 Oct 12, 2017 MedGen:C4012146,OMIM:251450;MedGen:CN533578,OMIM:617719 Desbuquois dysplasia 1;EPIPHYSEAL DYSPLASIA, MULTIPLE, 7 not provided 17 78995177 TGGCTGGCAGTGAAGGACGAGCGTCTGTACGTGGGCGGCCTGGGCAAGGAGTGGACGACCA 606231367 32180 NM_001853.3(COL9A3):c.148-1G>A COL9A3 Feb 01, 2000 MedGen:C3152083 Epiphyseal dysplasia, multiple, 3, with myopathy germline 20 62818517 CAGGGTTACATGTGGGTGTCTTTCCTCACAGGGAGAAGCTGGTCCTCCAGGTCTGCCTGGG 61751410 104926 NM_000350.2(ABCA4):c.122G>A (p.Trp41Ter) ABCA4 Jan 01, 2016 MeSH:C535804,MedGen:C1855465,OMIM:248200;MedGen:CN517202 Stargardt disease 1;not provided germline;unknown 1 94113011 GGCCTTTATCTTTATTTCTGGTCTTGATCTGGTTAAGGAATGCCAACCCACTCTACAGCCA 756029120 186883 NM_000053.3(ATP7B):c.3517G>A (p.Glu1173Lys) ATP7B Apr 13, 2017 MedGen:C0019202,OMIM:277900,Orphanet:ORPHA905,SNOMED CT:88518009 Wilson disease germline;unknown 13 51941120 AGCGATGTCAGTGACGCTATGACAGACCACGAGATGAAAGGACAGACAGCCATCCTGGTGG 796052062 200518 NM_000030.2(AGXT):c.595G>A (p.Gly199Ser) AGXT Nov 27, 2014 MedGen:C0268164,OMIM:259900,Orphanet:ORPHA93598,SNOMED CT:65520001 Primary hyperoxaluria, type I germline 2 240873049 GGCGGGACCCCCCTTTACATGGACCGGCAAGGTAAGGGTGGGCTCTGAGAGCCCTACCCAG 121908873 21491 NM_000369.2(TSHR):c.842G>A (p.Ser281Asn) TSHR May 01, 1998 MedGen:C1836706,OMIM:609152,Orphanet:ORPHA424 Hyperthyroidism, nonautoimmune germline 14 81139828 ACCTCACACGGGCTGACCTTTCTTACCCAAGCCACTGCTGTGCTTTTAAGAATCAGAAGAA 587776651 22097 NM_012233.2(RAB3GAP1):c.748+1G>A RAB3GAP1 Nov 28, 2017 MedGen:C1838625,OMIM:600118;MedGen:CN517202 Warburg micro syndrome 1;not provided germline 2 135120919 AGCAGTATTTTTGGCCTCAGCAACCTCCAGGTGAGATCATTTAGAACTATATTTAACTTAC 63751624 96496 NM_000251.2(MSH2):c.2634G>A (p.Glu878=) MSH2 Aug 01, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Lynch syndrome;not provided germline 2 47480871 AGCAGCAAAGAAGTGCTATCTGGAAAGAGAGGTTTGTCAGTTTGTTTTCATAGTTTAACTT 45517411 58525 NM_000548.4(TSC2):c.5220G>A (p.Trp1740Ter) TSC2 May 25, 2017 MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000;MedGen:CN517202 Tuberous sclerosis syndrome;not provided germline 16 2088286 CAACCCCACCGATATCTACCCCTCCAAGTGGATTGCCCGGCTCCGCCACATCAAGCGGCTC 587777374 133690 NM_001145155.1(NR2F2):c.571+1G>A NR2F2 Feb 01, 2018 MedGen:C4014310,OMIM:615779 Congenital heart defects, multiple types, 4 germline 15 96334604 GCCTCAAGGCCATAGTCCTGTTCACCTCAGGTAGGAAGGAGCCCTGTCTTCTCGTGCCCAC 137852573 24859 NM_000044.4(AR):c.1823G>A (p.Arg608Gln) AR Feb 13, 2017 MedGen:C0268301,OMIM:312300,Orphanet:ORPHA90797,SNOMED CT:58672003;MedGen:CN517202 Partial androgen insensitivity syndrome;not provided germline X 67686064 GCAGAAATGATTGCACTATTGATAAATTCCGAAGGAAAAATTGTCCATCTTGTCGTCTTCG 121918033 28619 NM_000301.3(PLG):c.2251G>A (p.Gly751Arg) PLG Dec 01, 1998 MedGen:C0521808 Dysplasminogenemia germline 6 160752240 TCCACCGAACTCTGTGCTGGGCATTTGGCCGGAGGCACTGACAGTTGCCAGGTAAGCAAAG 111033617 25065 NM_000206.2(IL2RG):c.854G>A (p.Arg285Gln) IL2RG Apr 14, 2016 MedGen:C1279481,OMIM:300400,SNOMED CT:203592006 X-linked severe combined immunodeficiency germline X 71108599 GCCTTCTCTGTGTGTATTTCTGGCTGGAACGGTGAGATTTGGAGAAGCCCAGAAAAATGAG 121918675 27686 NM_000458.3(HNF1B):c.494G>A (p.Arg165His) HNF1B Mar 01, 2005 MedGen:C0431693,OMIM:137920,SNOMED CT:253864004 Familial hypoplastic, glomerulocystic kidney unknown 17 37739490 ACAAGGGCACCCCTATGAAGACCCAGAAGCGTGCCGCTCTGTACACCTGGTACGTCAGAAA 137854890 48497 NM_000372.4(TYR):c.272G>A (p.Cys91Tyr) TYR Oct 05, 2012 MedGen:C0268494,OMIM:203100,Orphanet:ORPHA79431,SNOMED CT:6483008 Tyrosinase-negative oculocutaneous albinism germline 11 89178225 CTTCCGTCTTTTATAATAGGACCTGCCAGTGCTCTGGCAACTTCATGGGATTCAACTGTGG 886040966 262312 NM_002317.6(LOX):c.125G>A (p.Trp42Ter) LOX Oct 24, 2016 MedGen:C4284414,OMIM:617168 Aortic aneurysm, familial thoracic 10 germline 5 122077861 CGCGCGAGCCGCCGGCGGCTCCGGGCGCCTGGCGCCAGCAGATCCAATGGGAGAACAACGG 140522266 199951 NM_015506.2(MMACHC):c.440G>A (p.Gly147Asp) MMACHC Aug 18, 2016 MedGen:C1848561,OMIM:277400,Orphanet:ORPHA26;MedGen:CN517202 Methylmalonic acidemia with homocystinuria;not provided germline 1 45508806 TTTCTTCACCCTCTCCCCAGCGCATATCAGGTGTGTGCATACACCCCCGATTTGGGGGCTG 397517346 55160 NM_022124.5(CDH23):c.5923+1G>A CDH23 Sep 27, 2010 MedGen:C1832845,OMIM:601067 Usher syndrome, type 1D germline 10 71789043 AGGCAGAGGTGATGGAAAACTCTCCCGCTGGTAGGTGCTGGGCCCACCCGGGAGCTCCTGC 794727343 192758 NM_003494.3(DYSF):c.1956G>A (p.Trp652Ter) DYSF Mar 17, 2015 MedGen:C1850889,OMIM:253601,Orphanet:ORPHA268;MedGen:C1850808,OMIM:254130,Orphanet:ORPHA45448;MedGen:C1847532,OMIM:606768,Orphanet:ORPHA178400 Limb-girdle muscular dystrophy, type 2B;Miyoshi muscular dystrophy 1;Myopathy, distal, with anterior tibial onset germline 2 71553832 TCCAGGGTGCCACTACTACTACCTACCCTGGGGTAACGTGAAACCTGTGGTGGTGCTGTCA 118203387 58208 NM_000368.4(TSC1):c.491G>A (p.Trp164Ter) TSC1 Mar 06, 2014 MedGen:C0751674,OMIM:606690,Orphanet:ORPHA538,SNOMED CT:73017001;MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000;MedGen:CN517202 Lymphangiomyomatosis;Tuberous sclerosis syndrome;not provided germline 9 132923365 TCTTTGACATTTTTGGCCGTCTGTCATCATGGTGCCTGAAGAAACCAGGTACAGATCTCCT 74315289 19426 NM_057176.2(BSND):c.139G>A (p.Gly47Arg) BSND Feb 01, 2003 MedGen:C1865270,OMIM:602522 Bartter syndrome type 4 germline 1 54999325 TTCTATGCCATGGGCAGCGTCATGGTGATCGGGGGCATCATCTGGAGCATGTGCCAGTGCT 587777603 152959 NM_015600.4(ABHD12):c.477G>A (p.Trp159Ter) ABHD12 Aug 01, 2014 MedGen:C2675204,OMIM:612674,Orphanet:ORPHA171848 Polyneuropathy, hearing loss, ataxia, retinitis pigmentosa, and cataract germline 20 25320264 GAAGAACGCCCAAGGCAAAGACCAGATGTGGTATGAGGATGCCTTGGCTTCCAGCCACCCT 75718910 76970 NM_006397.2(RNASEH2A):c.704G>A (p.Arg235Gln) RNASEH2A Mar 13, 2014 MedGen:C1835912,OMIM:610333 Aicardi Goutieres syndrome 4 germline 19 12813149 AGCCTGTGTTCGGCTTCCCCCAGTTTGTCCGGTTCAGCTGGCGCACGGCCCAGACCATCCT 986151799 434153 NM_174936.3(PCSK9):c.1503G>A (p.Glu501=) PCSK9 - MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 1 55058647 GAGTGGGAAGCGGCGGGGCGAGCGCATGGAGGTGACTGTACCCCTCCTTCGTGTGTGTGTG 72645334 414021 NM_000088.3(COL1A1):c.841G>A (p.Gly281Ser) COL1A1 - MedGen:C0023931,OMIM:166200,SNOMED CT:385482004 Osteogenesis imperfecta type I unknown 17 50196634 AGTGGTTTGGATGGTGCCAAGGGAGATGCTGGTCCTGCTGGTCCTAAGGTAAGAGGCTGTC 147579680 107250 NM_173812.4(DPY19L2):c.869G>A (p.Arg290His) DPY19L2 Mar 10, 2014 MedGen:C3151407,OMIM:613958 Spermatogenic failure 9 germline 12 63624124 AGTGGGCATTTTGTTGATTTCAGGCCACCCGTGTGATGTGGACACCACCTCTCCGTGAAAG 72552258 21656 NM_005589.3(ALDH6A1):c.1336G>A (p.Gly446Arg) ALDH6A1 Jul 01, 2000 MedGen:C1864150,OMIM:614105 Methylmalonate semialdehyde dehydrogenase deficiency germline 14 74065249 CAGATTGTAAATAACAACCCATATGGAAATGGAACTGCCATCTTCACCACCAATGGAGCCA 886041848 264130 NM_198056.2(SCN5A):c.467G>A (p.Trp156Ter) SCN5A Jul 15, 2016 MedGen:CN517202 not provided germline 3 38622415 TGTTCATGGCCCAGCACGACCCTCCACCCTGGACCAAGTATGTCGAGTGAGTATCTTCAGG 515726195 136343 NM_015713.4(RRM2B):c.632G>A (p.Arg211Lys) RRM2B Apr 17, 2014 MedGen:CN187502 RRM2B-related mitochondrial disease germline 8 102218866 CTTTTGCTGCTATATTCTGGCTAAAGAAGAGAGGTCTTATGCCAGGACTCACTTTTTCCAA 121964952 27075 NM_000892.4(KLKB1):c.367G>A (p.Gly123Arg) KLKB1 Jul 01, 2007 MedGen:C0272339,OMIM:612423,Orphanet:ORPHA749,SNOMED CT:48976006 Prekallikrein deficiency germline 4 186236819 CGAGACATTTATAAAGGAGTTGATATGAGAGGAGTCAATTTTAATGTGTCTAAGGTTAGCA 575472572 39135 NR_023343.1(RNU4ATAC):n.55G>A RNU4ATAC Jun 01, 2012 MedGen:C1859452,OMIM:210710,SNOMED CT:254102008 Osteodysplastic primordial dwarfism, type 1 germline 2 121530934 CTACTGTCCAATGAGCGCATAGTGAGGGCAGTACTGCTAACGCCTGAACAACACACCCGCA 180177259 186659 NM_000030.2(AGXT):c.737G>A (p.Trp246Ter) AGXT Nov 27, 2014 MedGen:C0268164,OMIM:259900,Orphanet:ORPHA93598,SNOMED CT:65520001 Primary hyperoxaluria, type I germline;unknown 2 240875165 AGCCCTTCTCCTTCTACCTGGACATCAAGTGGCTGGCCAACTTCTGGGGCTGTGACGACCA 786205862 189178 NM_000159.3(GCDH):c.675G>A (p.Trp225Ter) GCDH Mar 02, 2016 MedGen:C0268595,OMIM:231670,Orphanet:ORPHA25,SNOMED CT:360416003,SNOMED CT:76175005 Glutaric aciduria, type 1 germline;unknown 19 12896244 CTCGCCTATGGCCGATCTGTTTGTAGTGTGGGCTCGGTGTGAAGATGGCTGCATTCGGGGC 111888148 136848 NM_000540.2(RYR1):c.1589G>A (p.Arg530His) RYR1 Jun 01, 2014 MedGen:CN031421,OMIM:145600;MedGen:CN517202 Malignant hyperthermia, susceptibility to, 1;not provided germline;unknown 19 38455463 CACCTCTTCCCCCCTCAGCTTCTCTAATCCGTGGCAATCGTAGCAACTGTGCCCTCTTCTC 779857359 433541 NM_147127.4(EVC2):c.645G>A (p.Trp215Ter) EVC2 Apr 11, 2017 MedGen:CN169374 not specified germline 4 5689218 GCTGGACAGCATTGCTGGTCTCACCATTTGGGACTCTGTGGGAAACAGGACCTCGGAAGGA -1 444306 NM_018972.2(GDAP1):c.929G>A (p.Arg310Gln) GDAP1 Jul 14, 2017 MedGen:CN517202 not provided germline 8 74364219 TAATCTCTGCAGTGCTGCCAACAGCATTCCGGGTGGCCAAGAAAAGGGCCCCAAAAGTTCT 267607689 96630 NM_000251.2(MSH2):c.645+1G>A MSH2 Aug 15, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Hereditary cancer-predisposing syndrome;Lynch syndrome germline 2 47410373 ACTGCTGGAGACATGGGGAAACTGAGACAGGTAAGCAAATTGAGTCTAGTGATAGAGGAGA -1 440085 NM_001199397.1(NEK1):c.418G>A (p.Gly140Arg) NEK1 Jun 01, 2017 MedGen:C0432198,OMIM:269860,SNOMED CT:254052001 Type IV short rib polydactyly syndrome maternal 4 169589493 CTTTTACAGAACATATTTTTAACTAAAGATGGAACAGTACAACTTGGAGATTTTGGAATTG 387906468 25420 NM_000402.4(G6PD):c.1192G>A (p.Glu398Lys) G6PD May 24, 2017 MedGen:C2720289,OMIM:300908,Orphanet:ORPHA466026;na Anemia, nonspherocytic hemolytic, due to G6PD deficiency;G6PD PUERTO LIMON germline X 154532752 TGCGGCAAGGCCCTGAACGAGCGCAAGGCCGAGGTGAGGCTGCAGTTCCATGATGTGGCCG 878854073 376684 NM_000546.5(TP53):c.673-1G>A TP53 Sep 25, 2015 MedGen:CN517202 not provided germline 17 7674291 GGCCTCATCTTGGGCCTGTGTTATCTCCTAGGTTGGCTCTGACTGTACCACCATCCACTAC 397514044 49356 NM_024334.2(TMEM43):c.253G>A (p.Glu85Lys) TMEM43 Jun 01, 2011 MedGen:C3553060,OMIM:614302 Emery-Dreifuss muscular dystrophy 7, autosomal dominant germline 3 14130912 GACAGCATCCACAGTGTGGCTCCGGAGAATGAAGGAAGGCTGGTGCACATCATTGGCGCCT 1057519438 362151 NM_001039803.2(CDK20):c.564G>A (p.Trp188Ter) CDK20 - Human Phenotype Ontology:HP:0007018,MedGen:C1263846,OMIM:143465,SNOMED CT:406506008;Human Phenotype Ontology:HP:0000365,MedGen:C0018772;Human Phenotype Ontology:HP:0000722,MedGen:C0600104;Human Phenotype Ontology:HP:0001250,MedGen:C0036572 Attention deficit hyperactivity disorder;Hearing impairment;Obsessive-compulsive behavior;Seizures de novo 9 87969919 TCTGACCTGCTTGGGGCTCTGTGTCCACAGGTCTGTGGGCTGCATCATGGGGGAGCTGTTG 121908522 20682 NM_000030.2(AGXT):c.245G>A (p.Gly82Glu) AGXT Mar 07, 2016 MedGen:C0268164,OMIM:259900,Orphanet:ORPHA93598,SNOMED CT:65520001 Primary hyperoxaluria, type I germline;unknown 2 240869249 ACCCACTCACACTGGTCATCTCTGGCTCGGGACACTGTGCCCTGGAGGCCGCCCTGGTCAA 267607221 20729 NM_002334.3(LRP4):c.479G>A (p.Cys160Tyr) LRP4 May 14, 2010 MedGen:C1859309,OMIM:212780,Orphanet:ORPHA3258 Syndactyly Cenani Lenz type germline 11 46899455 ACAAGGAGTTCCGCTGTAGTGACGGAAGCTGCATTGCTGAGCATTGGTACTGCGACGGTGA 104894260 31726 NM_130799.2(MEN1):c.1307G>A (p.Trp436Ter) MEN1 Sep 06, 2017 MeSH:D018761,MedGen:C0025267,OMIM:131100,Orphanet:ORPHA652,SNOMED CT:30664006;MedGen:CN517202 Multiple endocrine neoplasia, type 1;not provided germline 11 64805077 GCAGTCCCACGCCTGTGCTGCATGTGGGCTGGGCCACCTTTCTTGTGCAGTCCCTAGGCCG 371675217 98212 NM_000023.3(SGCA):c.101G>A (p.Arg34His) SGCA Aug 21, 2017 MedGen:C2936332,OMIM:608099,Orphanet:ORPHA62;MedGen:CN517202 Limb-girdle muscular dystrophy, type 2D;not provided germline;unknown 17 50167431 AGCAGACCACGCTACACCCACTTGTGGGCCGTGTCTTTGTGCACACCTTGGACCATGAGAC 121909347 23427 NM_000557.4(GDF5):c.1424G>A (p.Ser475Asn) GDF5 Nov 20, 2014 MedGen:C1832708,OMIM:610017 Multiple synostoses syndrome 2 germline 20 35433991 GCTGTGTGCCCACGCGGCTGAGTCCCATCAGCATCCTCTTCATTGACTCTGCCAACAACGT 387907192 40341 NM_014714.3(IFT140):c.1990G>A (p.Glu664Lys) IFT140 Nov 22, 2017 MedGen:CN638473,OMIM:617781;MedGen:C1849437,OMIM:266920,Orphanet:ORPHA140969 RETINITIS PIGMENTOSA 80;Renal dysplasia, retinal pigmentary dystrophy, cerebellar ataxia and skeletal dysplasia not provided 16 1564074 GACCAGAGTGAGCCCCGGCTGTTTGTATGCGAAGCCGTGCAGGAGACGCCGCGCTCCCAGC 60791294 21600 NM_001171.5(ABCC6):c.3413G>A (p.Arg1138Gln) ABCC6 Jun 01, 2000 MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16163086 CTGAGACGTTCCAGGGCAGCACAGTGGTCCGGGCATTCCGAACCCAGGCCCCCTTTGTGGC 138909849 226848 NM_014669.4(NUP93):c.1537+1G>A NUP93 Apr 06, 2016 MedGen:C4225166,OMIM:616892 Nephrotic syndrome, type 12 germline 16 56833407 TAAAGTCCTCTGGACAGAGTGCTCAGCTCCGTGAGTATTTGGGATTGGATTGACAGTAATG 199473428 78157 NM_000238.3(KCNH2):c.1750G>A (p.Gly584Ser) KCNH2 Jan 23, 2017 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MeSH:D008133,MedGen:C0023976,SNOMED CT:9651007;MedGen:C3150943,OMIM:613688;MedGen:C3150943,OMIM:613688;MedGen:C1865020,OMIM:609620;MedGen:CN517202 Congenital long QT syndrome;Long QT syndrome;Long QT syndrome 2;Long QT syndrome 2;Short QT syndrome 1;not provided germline;maternal 7 150951643 ATGGAGCAGCCACACATGGACTCACGCATCGGCTGGCTGCACAACCTGGGCGACCAGATAG 137854483 31503 NM_000138.4(FBN1):c.3662G>A (p.Cys1221Tyr) FBN1 Jan 01, 2006 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006 Marfan syndrome germline 15 48485424 TCTGCACAAACTCTGAAGGCAGCTATGAATGTAGCTGTCAGCCGGGATTTGCACTAATGCC 767083273 371525 NM_000494.3(COL17A1):c.1906G>A (p.Gly636Arg) COL17A1 Jan 06, 2017 MedGen:CN517202 not provided germline 10 104053064 GAAGGCCCCATGGGACCTCGTGGTGAGGCAGGGCCTCCTGGATCTGGAGAGAAAGGGGAAA 794728568 204198 NM_000218.2(KCNQ1):c.557G>A (p.Gly186Asp) KCNQ1 Jan 01, 2013 MedGen:C0035828,OMIM:192500,Orphanet:ORPHA101016,SNOMED CT:20852007 Long QT syndrome 1 germline 11 2570707 GGTCCGCCGGCTGCCGCAGCAAGTACGTGGGCCTCTGGGGGCGGCTGCGCTTTGCCCGGAA 797045072 445988 NM_001083962.1(TCF4):c.1069+1G>A TCF4 Jun 26, 2017 MedGen:CN517202 not provided germline 18 55259948 CTCCTGTTGGCTCTCCTCCATCTCTCTCAGGTAGTGTATTTCAAATCCCATTTCATCATAT 61749398 15339 NM_000552.4(VWF):c.3970G>A (p.Gly1324Ser) VWF May 01, 2010 MedGen:CN517202;MedGen:C1282974,Orphanet:ORPHA166090,SNOMED CT:359729006 not provided;von Willebrand disease type 2M germline 12 6019448 GTCCGCGTGGCCGTGGTGGAGTACCACGACGGCTCCCACGCCTACATCGGGCTCAAGGACC 1064794308 409142 NM_005982.3(SIX1):c.329G>A (p.Arg110Gln) SIX1 Mar 27, 2017 MedGen:CN517202 not provided germline 14 60648861 GCCGACCCCTGGGCGCCGTGGGCAAATATCGGGTGCGCCGAAAATTTCCACTGCCGCGCAC 121912953 32147 NM_004530.5(MMP2):c.302G>A (p.Arg101His) MMP2 Feb 01, 2007 MedGen:C1850155,OMIM:259600 Multicentric osteolysis, nodulosis and arthropathy germline 16 55483057 AGAATACCATCGAGACCATGCGGAAGCCACGCTGCGGCAACCCAGATGTGGCCAACTACAA 28936674 23996 NM_000098.2(CPT2):c.520G>A (p.Glu174Lys) CPT2 May 15, 2014 MedGen:C0342790,Orphanet:ORPHA157,SNOMED CT:238002005;MedGen:C1833511,OMIM:600649,Orphanet:ORPHA228305 Carnitine palmitoyltransferase II deficiency;Carnitine palmitoyltransferase II deficiency, infantile germline 1 53210194 AAGACACTCCGGGCTGGCCTTCTGGAGCCAGAAGTGTTCCACTTGAACCCTGCAAAAAGTG 200166664 107258 NM_006147.3(IRF6):c.1199G>A (p.Arg400Gln) IRF6 Sep 01, 2010 MedGen:C0175697,OMIM:119300,SNOMED CT:79261008 Van der Woude syndrome germline 1 209788625 GTCCTGAACAGGTCATTCCAGTAGTGGCTCGGATGATCTACGAGATGTTTTCTGGTGATTT 587779581 107038 NM_000090.3(COL3A1):c.2168G>A (p.Gly723Asp) COL3A1 Mar 08, 2016 MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188999516 CTGGGCCACCTGGTGCTGCTGGTACTCCTGGTCTGCAAGGAATGCCTGGAGAAAGAGGAGG 180177038 29016 NM_004333.4(BRAF):c.1501G>A (p.Glu501Lys) BRAF Dec 29, 2015 MedGen:CN029449,OMIM:115150,SNOMED CT:403770008;MedGen:C3150970,OMIM:613706;MedGen:CN166718,Orphanet:ORPHA98733;MedGen:CN517202 Cardiofaciocutaneous syndrome 1;Noonan syndrome 7;Rasopathy;not provided germline;unknown 7 140778007 ACACCTCAGCAGTTACAAGCCTTCAAAAATGAAGTAGGAGTACTCAGGTGAGCTTGTGTGA 864309715 215724 NM_001009999.2(KDM1A):c.1207G>A (p.Glu403Lys) KDM1A Dec 10, 2015 MedGen:C4225229,OMIM:616728,Orphanet:ORPHA477993 Cleft palate, psychomotor retardation, and distinctive facial features de novo;germline 1 23068566 CAGGTTCCTAAAGAGAAAGATGAAATGGTAGAGCAAGAGTTTAACCGGTTGCTAGAAGCTA 121909793 22788 NM_001017535.1(VDR):c.239G>A (p.Arg80Gln) VDR Apr 01, 1990 MedGen:C0268690,OMIM:277440,SNOMED CT:72831007 Vitamin D-dependent rickets, type 2 germline 12 47865085 AGGACAACCGACGCCACTGCCAGGCCTGCCGGCTCAAACGCTGTGTGGACATCGGCATGAT 587778777 76741 NM_000784.3(CYP27A1):c.1184+1G>A CYP27A1 Aug 03, 2016 MedGen:C0238052,OMIM:213700,Orphanet:ORPHA909,SNOMED CT:63246000;MedGen:CN517202 Cholestanol storage disease;not provided germline 2 218814188 GCTCAAAGCTGTGCTTAAGGAGACTCTGCGGTAGGACAGAATGCTGTTCTGGGGGGCACAG 281865355 104887 NM_000330.3(RS1):c.590G>A (p.Arg197His) RS1 Jun 21, 2017 MedGen:C0271091,OMIM:312700,Orphanet:ORPHA792,SNOMED CT:86923008;MedGen:CN517202 Juvenile retinoschisis;not provided germline;unknown X 18642089 AGAACCTGCTGCGGCCCCCCATCATCTCCCGCTTCATCCGCCTCATCCCGCTGGGCTGGCA 771066826 434384 NM_052988.4(CDK10):c.608+1G>A CDK10 Sep 29, 2017 MedGen:CN502749,OMIM:617694 AL KAISSI SYNDROME germline 16 89693468 GCCAATGACCCCCAAGGTGGTCACTCTCTGGTAAGTCCTTCTGAAGCATGGTGGCCCCTGG 879254459 245464 NM_000527.4(LDLR):c.298G>A (p.Asp100Asn) LDLR Mar 30, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11102771 GATGGCCAAGTGGACTGCGACAACGGCTCAGACGAGCAAGGCTGTCGTAAGTGTGGCCCTG 200620279 360016 NM_014384.2(ACAD8):c.958G>A (p.Ala320Thr) ACAD8 Jan 06, 2016 MedGen:CN517202 not provided germline 11 134261756 CCTGTGCTGCAGTACTTGCAATTCACACTGGCTGATATGGCAACAAGGCTGGTGGCCGCGC 398122565 96934 NM_000059.3(BRCA2):c.681+1G>A BRCA2 Jan 31, 2014 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome germline 13 32329493 GAAACTGTATTTCCTCATGATACTACTGCTGTAAGTAAATATGACATTGATTAGACTGTTG 121912464 29776 NM_001005619.1(ITGB4):c.4592G>A (p.Trp1531Ter) ITGB4 Nov 01, 1998 MedGen:C1856934,OMIM:226730,Orphanet:ORPHA79403 Epidermolysis bullosa junctionalis with pyloric atresia germline 17 75755785 CCCTGGGGCCCACATCTCTCAGAGTGAGCTGGCAGGAGCCGCGGTGCGAGCGGCCGCTGCA 150038620 187049 NM_004646.3(NPHS1):c.2335-1G>A NPHS1 Jun 05, 2017 MedGen:C0403399,OMIM:256300,Orphanet:ORPHA839,SNOMED CT:197601003 Finnish congenital nephrotic syndrome germline;unknown 19 35842551 GGAGGCCAATTCTGGACTCTTGGGCCTCCAGGGAGAAGATGAGGAGGACCAGAGCCTGGAT 786201063 181619 NM_003000.2(SDHB):c.286+1G>A SDHB Jun 30, 2014 MedGen:C1708353,Orphanet:ORPHA29072;MedGen:C0027672,SNOMED CT:699346009 Hereditary Paraganglioma-Pheochromocytoma Syndromes;Hereditary cancer-predisposing syndrome germline 1 17033059 CTTTGACCTTCCGAAGATCATGCAGAGAAGGTGAGCATTTCATTCCTGTTGGGCTCCAGAT 386134178 51303 NM_020919.3(ALS2):c.1619G>A (p.Gly540Glu) ALS2 Feb 10, 2011 MedGen:C1853396,OMIM:606353,Orphanet:ORPHA247604 Juvenile primary lateral sclerosis not provided 2 201754524 CCTGGGGGAAAGGGAAGGAAGGGCAGCTGGGGCACGGCGATGTTCTGCCTAGGTAAGCGCT 1131690851 420546 NM_000321.2(RB1):c.1345G>A (p.Gly449Arg) RB1 Oct 02, 2012 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 13 48379606 CTTTTTGTTTGTTTGTAGCGATACAAACTTGGAGTTCGCTTGTATTACCGAGTAATGGAAT 761669036 259784 NM_004453.3(ETFDH):c.1832G>A (p.Gly611Glu) ETFDH Aug 25, 2015 MedGen:CN517202 not provided germline 4 158708505 TTAACTGGGTGGTACCTGAAGGTGGAGGAGGACCTGCTTACAATGGAATGTAAACTGCAGC 387907189 40335 NM_006947.3(SRP72):c.620G>A (p.Arg207His) SRP72 May 04, 2012 MedGen:C3808553,OMIM:614675 Bone marrow failure syndrome 1 germline 4 56476680 AAAACAATTTTTCTCCTGTAGATCTTTGCCGCCGTTCATTATCAGAAGACACTGTAAGTAT 879253835 224638 NM_000255.3(MUT):c.851G>A (p.Gly284Glu) MUT - MedGen:C1855114,OMIM:251000 Methylmalonic aciduria due to methylmalonyl-CoA mutase deficiency germline 6 49456140 TTCTGGAGCTGGCCTATACTTTAGCAGATGGATTGGAGTACTCTAGAACTGGACTCCAGGC 730880451 179870 NM_000169.2(GLA):c.801G>A (p.Met267Ile) GLA Jan 18, 2014 MedGen:CN517202 not provided germline X 101398785 TGGACCAGGGGGTTGGAATGACCCAGATATGGTAAAAACTTGAGCCCTCCTTGTTCAAGAC 104894369 29106 NM_000432.3(MYL2):c.173G>A (p.Arg58Gln) MYL2 Oct 31, 2017 MedGen:C1834460,OMIM:608758;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Familial hypertrophic cardiomyopathy 10;Primary familial hypertrophic cardiomyopathy;not provided germline;unknown 12 110914287 TCCCTGAGTGTGTGTTTCCTACCCTAGGGCGAGTGAACGTGAAAAATGAAGAAATTGATGA 121918721 48132 NM_000359.2(TGM1):c.1187G>A (p.Arg396His) TGM1 Jan 18, 2013 MedGen:C3536797,OMIM:242300 Autosomal recessive congenital ichthyosis 1 germline 14 24258646 CAGTGCTGCGCTGCCTGGGTCTGGCCACCCGTACTGTCACCAACTTCAACTCCGCCCACGA 863225292 214535 NM_000806.5(GABRA1):c.902G>A (p.Arg301Lys) GABRA1 Aug 12, 2014 MedGen:C3810400,OMIM:615744 Epileptic encephalopathy, early infantile, 19 de novo 5 161895711 TCACCATGACAACATTGAGCATCAGTGCCAGAAACTCCCTCCCTAAGGTGGCTTATGCAAC 61754367 18844 NM_000372.4(TYR):c.707G>A (p.Trp236Ter) TYR Jan 01, 1993 MedGen:C0268494,OMIM:203100,Orphanet:ORPHA79431,SNOMED CT:6483008;MedGen:CN517202 Tyrosinase-negative oculocutaneous albinism;not provided germline 11 89178660 CAGGAGATGAAAACTTCACTATTCCATATTGGGACTGGCGGGATGCAGAAAAGTGTGACAT 727504159 177225 NM_003060.3(SLC22A5):c.338G>A (p.Cys113Tyr) SLC22A5 Jul 29, 2016 MedGen:C0342788,OMIM:212140,Orphanet:ORPHA158,SNOMED CT:21764004;MedGen:CN517202 Renal carnitine transport defect;not provided germline;unknown 5 132370310 TGGACCTGGGGCAGCTGGAGCAGGAGAGCTGTCTGGATGGCTGGGAGTTCAGTCAGGACGT 772570523 225790 NM_006502.2(POLH):c.764+1G>A POLH Sep 26, 2016 MedGen:C1848410,OMIM:278750,Orphanet:ORPHA90342 Xeroderma pigmentosum, variant type germline 6 43601092 GCTCTTCAGCCAAATGCCCATTCGCAAAATGTAAGTATTCAGGCAGCATGTTAAATTTCAC 587777774 166140 NM_006623.3(PHGDH):c.793G>A (p.Glu265Lys) PHGDH Sep 04, 2014 MedGen:CN032230,OMIM:256520 Neu-Laxova syndrome 1 germline 1 119737114 GCCAACTTAGAGGTATCTCTTTCTGGGCAGGAGCCGCCACGGGACCGGGCCTTGGTGGACC 879254597 245665 NM_000527.4(LDLR):c.622G>A (p.Glu208Lys) LDLR Mar 25, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11105528 TCGGCCTTCGAGTTCCACTGCCTAAGTGGCGAGTGCATCCACTCCAGCTGGCGCTGTGATG 267607571 77807 NM_170707.3(LMNA):c.569G>A (p.Arg190Gln) LMNA Jun 26, 2017 MedGen:CN517202 not provided germline 1 156134458 AGAAGCAACTTCAGGATGAGATGCTGCGGCGGGTGGATGCTGAGAACAGGCTGCAGACCAT 45517150 58558 NM_000548.4(TSC2):c.976-15G>A TSC2 Jul 27, 2017 MedGen:C1860707,OMIM:613254;MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000;MedGen:CN517202 Tuberous sclerosis 2;Tuberous sclerosis syndrome;not provided germline 16 2060655 AGCAAGCAGCTCTGACCCTGTGTGCTGGCCGGGCTCGTGTTCCAGGCCATGGCATGTCCGA 886043966 272884 NM_003494.3(DYSF):c.5529G>A (p.Trp1843Ter) DYSF Jun 09, 2016 MedGen:C1850889,OMIM:253601,Orphanet:ORPHA268 Limb-girdle muscular dystrophy, type 2B germline 2 71669608 CTATTCTCTAAAAACATGTATGTCTAGTTGGATGATTGGCTTTGAAGAACACAAGCAAAAG -1 485806 NM_000061.2(BTK):c.863G>A (p.Arg288Gln) BTK Mar 03, 2010 MedGen:C1832241,OMIM:601495,Orphanet:ORPHA33110 Agammaglobulinemia, non-Bruton type germline X 101359324 TTCACAGGTGGTATTCCAAACACATGACTCGGAGTCAGGCTGAGCAACTGCTAAAGCAAGA 587781558 150896 NM_000051.3(ATM):c.2921+1G>A ATM Jul 31, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202;MedGen:CN169374 Ataxia-telangiectasia syndrome;Hereditary cancer-predisposing syndrome;not provided;not specified germline;unknown 11 108271147 AGATGTTCTTGAACTTCTGAAACCACTATCGTAAGAAATTAAAACCTTATGTTATGTTCAC 267607135 15173 NM_001128228.2(TPRN):c.1239G>A (p.Trp413Ter) TPRN Mar 12, 2010 MedGen:C2750082,OMIM:613307 Deafness, autosomal recessive 79 germline 9 137199473 CACCGCCCTCGCTGACCGGGCTATTAGGTGGCAGAGGCCGTCCTCACCGCCCCCCTTCCTG 587783798 170065 NM_000252.2(MTM1):c.1467+1G>A MTM1 Jun 06, 2013 MedGen:C0410203,OMIM:310400,Orphanet:ORPHA596,SNOMED CT:46804001 Severe X-linked myotubular myopathy germline X 150660485 TTCAACTGTGAATCTGCTCGAGAAAGACAGGTGAGTTAAAATGCTATTTTTTTTGATACAT 137853260 25897 NM_000276.3(OCRL):c.1499G>A (p.Arg500Gln) OCRL Aug 27, 2014 MedGen:C0028860,OMIM:309000,Orphanet:ORPHA534,SNOMED CT:79385002 Lowe syndrome germline X 129569296 GGAAATGCCGGGTTCCAGCCTGGTGTGACCGAATTCTTTGGAGAGGAACAAATGTTAATCA 104886103 35729 NM_000495.4(COL4A5):c.1243G>A (p.Gly415Arg) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108591135 AGGGGTCAGAAAGGTGATGAAGGACCACCTGGAATTTCCATTCCTGGACCTCCTGGACTTG 121918062 15111 NM_000374.4(UROD):c.942G>A (p.Glu314=) UROD Nov 01, 1998 MedGen:C0268323,OMIM:176100,SNOMED CT:59229005 Familial porphyria cutanea tarda germline 1 45015006 CCTGGACCCCTGTGCCTTGTATGCATCTGAGGTAACAGCCAGGGCCCCTCTGTGTGTCTGT 1800450 29389 NM_000242.2(MBL2):c.161G>A (p.Gly54Asp) MBL2 Oct 01, 2004 MedGen:C1835140,OMIM:614372 Mannose-binding protein deficiency germline;unknown 10 52771475 ACGGCTTCCCAGGCAAAGATGGGCGTGATGGCACCAAGGGAGAAAAGGGGGAACCAGGTAC 387906553 31783 NM_001972.3(ELANE):c.214G>A (p.Val72Met) ELANE Oct 01, 2000 MedGen:C1859966,OMIM:202700 Severe congenital neutropenia autosomal dominant germline 19 853022 CCCAACTTCGTCATGTCGGCCGCGCACTGCGTGGCGAATGTGTGAGTAGCCGGGAGTGTGC 137852596 24892 NM_000044.4(AR):c.1732G>A (p.Gly578Arg) AR Oct 01, 2001 MedGen:C0039585,OMIM:300068,SNOMED CT:12313004 Androgen resistance syndrome germline X 67643371 TCTGGGTGTCACTATGGAGCTCTCACATGTGGAAGCTGCAAGGTCTTCTTCAAAAGAGCCG 397509370 32241 NM_000090.3(COL3A1):c.1347+1G>A (p.Arg449_Gly450insValSerPheThrAlaThrAspLeu+) COL3A1 Jul 01, 1990 MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188994595 AAAGGAGAGCCCGGACCACGTGGTGAACGCGTAAGTTTTACTGCAACAGATCTGGTTATTT 28933681 25331 NM_000132.3(F8):c.5710G>A (p.Glu1904Lys) F8 Dec 01, 1993 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154904401 GAATTTGCTCTGTTTTTCACCATCTTTGATGAGACCAAAAGCTGGTACTTCACTGAAAATA 587779586 107045 NM_000090.3(COL3A1):c.1268G>A (p.Gly423Asp) COL3A1 May 06, 2015 MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000;MedGen:CN517202 Ehlers-Danlos syndrome, type 4;not provided germline 2 188994307 GGGGTCCTCCAGGACCAGCCGGTGCTAATGGTGCTCCTGGACTGCGAGGTGGTGCAGTAAG 104886297 36111 NM_000495.4(COL4A5):c.4787G>A (p.Gly1596Asp) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108694905 GTCCTCAGGGATGGGATTCTCTGTGGATTGGTTATTCCTTCATGATGGTATTTTACACTCT -1 444452 NM_007327.3(GRIN1):c.1930G>A (p.Val644Met) GRIN1 Sep 13, 2017 MedGen:CN517202 not provided germline 9 137162656 ATGGTGTGGGCCGGCTTTGCCATGATCATCGTGGCCTCCTACACCGCCAACCTGGCGGCCT 121912757 32821 NM_000342.3(SLC4A1):c.1937G>A (p.Arg646Gln) SLC4A1 Jan 01, 2000 na SWANN BLOOD GROUP ANTIGEN germline 17 44254616 ATGGCTTCAAGGTGTCCAACTCCTCAGCCCGGGGCTGGGTCATCCACCCACTGGGCTTGCG 1057520298 380136 NM_018684.3(ZC4H2):c.225+5G>A ZC4H2 Mar 02, 2017 MedGen:C0796200,OMIM:314580,Orphanet:ORPHA3454 Wieacker syndrome germline X 64921812 GACTGATCCACGCTGACATCAATGTGGTACGTGGCTGCCTGGAGCCTATCTCTAAAGCCTT 267607190 15822 NM_213595.3(ISCU):c.149G>A (p.Gly50Glu) ISCU Mar 03, 2016 MedGen:C1850718,OMIM:255125,Orphanet:ORPHA43115 Myopathy with lactic acidosis, hereditary germline 12 108564313 TTGATCATTATGAAAATCCTAGAAACGTGGGGTCCCTTGACAAGACATCTAAAAATGTTGG 137853933 34289 NM_004750.4(CRLF1):c.935G>A (p.Arg312His) CRLF1 Mar 03, 2011 MedGen:C1848947,OMIM:272430 Cold-induced sweating syndrome 1 not provided 19 18596711 AACCCGGCACCGTGTACTTCGTGCAAGTGCGCTGCAACCCCTTTGGCATCTATGGCTCCAA 189923208 269414 NM_001130987.1(DYSF):c.1577-1G>A DYSF Dec 21, 2015 MedGen:C1850889,OMIM:253601,Orphanet:ORPHA268 Limb-girdle muscular dystrophy, type 2B germline 2 71551040 GACCCCTCTGATTGCCACTTGTGTCTCCCAGTGGATGACTACCTGGGCTTCCTCCCCACTT 760956030 432314 NM_001287.5(CLCN7):c.857G>A (p.Arg286Gln) CLCN7 Apr 20, 2017 MedGen:C1833700,OMIM:166600 Osteopetrosis autosomal dominant type 2 germline 16 1456172 TCGAGTACTTCCGCAGAGACACAGAGAAGCGGGACTTCGTCTCCGCAGGGGCTGCGGCCGG 28934580 27367 NM_199292.2(TH):c.1010G>A (p.Arg337His) TH Jan 01, 2000 MedGen:C1854299,OMIM:605407 Segawa syndrome, autosomal recessive germline 11 2166693 CCCGGGACTTCCTGGCCAGCCTGGCCTTCCGCGTGTTCCAGTGCACCCAGTATATCCGCCA 398123560 99445 NM_001083962.1(TCF4):c.1086G>A (p.Trp362Ter) TCF4 Apr 27, 2017 MedGen:C1970431,OMIM:610954,Orphanet:ORPHA2896;MedGen:CN517202 Pitt-Hopkins syndrome;not provided germline 18 55257375 CACTTTAATATCAGCAGGCACAGCTGTTTGGTCTAGAAATGGAGGACAGGCCTCATCGTCT 1060501722 396826 NM_003165.3(STXBP1):c.1434G>A (p.Trp478Ter) STXBP1 Jun 09, 2016 MedGen:C0393706,Orphanet:ORPHA1934 Early infantile epileptic encephalopathy germline 9 127678505 CAGCGAGCAGACCTACCAGCTCTCACGGTGGACTCCGATTATCAAGGACATCATGGAGGTT 368778627 171188 NM_144606.5(FLCN):c.779G>A (p.Trp260Ter) FLCN Jun 01, 2014 MedGen:C1868193,OMIM:173600,Orphanet:ORPHA2903 Pneumothorax, primary spontaneous germline 17 17222501 TGTGGGCGTGCCTGCACACCTCCTTTGCCTGGTAACGGGCGTCTCTGCTTTTGGCATATCT 980578884 237521 NM_006231.3(POLE):c.1420G>A (p.Val474Ile) POLE May 25, 2016 MedGen:C3554460,OMIM:615083 Colorectal cancer, susceptibility to, 12 unknown 12 132673217 GTCGCCACTTACTACCTGTACATGAAGTACGTCCACCCATTCATCTTTGCTCTGTGCACCA -1 480554 NM_007327.3(GRIN1):c.2479G>A (p.Gly827Arg) GRIN1 Feb 22, 2018 MedGen:C3280282,OMIM:614254 Neurodevelopmental disorder with or without hyperkinetic movements and seizures, autosomal dominant germline 9 137163794 TTCATGCTGGTAGCTGGGGGCATCGTGGCCGGGATCTTCCTGATTTTCATCGAGATTGCCT 587784256 169343 NM_000430.3(PAFAH1B1):c.192+1G>A PAFAH1B1 Feb 08, 2013 MedGen:C1843916,OMIM:607432 Lissencephaly 1 germline 17 2666091 TGGACATCTGTTATTAGATTACAAAAGAAGGTAACTAAGTCTTTTTTCTTTAAAATTAGTT 1057519300 361813 NM_020738.3(KIDINS220):c.4050G>A (p.Trp1350Ter) KIDINS220 Jan 11, 2017 MedGen:C4284592,OMIM:617296 Spastic paraplegia, intellectual disability, nystagmus, and obesity germline 2 8733447 AGGTGCCCCTCGTCACAGTAATCTAAGTTGGCAGGTATTTATTGAATGGCATTTTTCATAT 281875215 40290 NM_024110.4(CARD14):c.349G>A (p.Gly117Ser) CARD14 Nov 25, 2014 MedGen:C1864497,OMIM:602723;MedGen:CN517202 Psoriasis susceptibility 2;not provided germline 17 80182790 CAGCCTGATGTTGACTTCAGTAACTTTAGCGGTGAGAGCTCCGACTTTGACGGTTTGGCAG 879254448 245435 NM_000527.4(LDLR):c.245G>A (p.Cys82Tyr) LDLR Mar 30, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11102718 ACTTCAGCTGTGGGGGCCGTGTCAACCGCTGCATTCCTCAGTTCTGGAGGTGCGATGGCCA 1131692272 424494 NM_002285.2(AFF3):c.697G>A (p.Ala233Thr) AFF3 Oct 10, 2016 MedGen:CN517202 not provided de novo 2 100006808 AAACCCAGCCTGGTCCAGCAGAAACCGACCGCGTATGTGAGGCCAATGGACGGCCAAGATC 794728106 197023 NM_004415.3(DSP):c.273+1G>A DSP Aug 18, 2014 MedGen:CN517202 not provided germline 6 7555821 TTGATGCGAGCAGAGCTCATCGTGCAGCCTGTAAGCTTTCCCTGTTCCCATCGCTTCTCCC 61736587 39175 NM_006949.3(STXBP2):c.1621G>A (p.Gly541Ser) STXBP2 Aug 08, 2017 MedGen:C2751293,OMIM:613101;MedGen:CN517202 Hemophagocytic lymphohistiocytosis, familial, 5;not provided germline 19 7647436 GGCCCCCGGCTCATCGTGTATGTCATGGGCGGTGTGGCCATGTCAGAGATGAGGGCCGCCT 397508413 68203 NM_000492.3(CFTR):c.2645G>A (p.Trp882Ter) CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline 7 117602851 TCCAGGTGGCTGCTTCTTTGGTTGTGCTGTGGCTCCTTGGAAAGTGAGTATTCCATGTCCT 121913148 29736 NM_000208.3(INSR):c.3059G>A (p.Arg1020Gln) INSR Mar 15, 1991 MedGen:C0271690,OMIM:610549,SNOMED CT:9859006 Insulin-resistant diabetes mellitus AND acanthosis nigricans germline 19 7125482 TGTACGTGCCGGACGAGTGGGAGGTGTCTCGAGAGAAGATCACCCTCCTTCGAGAGCTGGG 121917723 15251 NM_000285.3(PEPD):c.833G>A (p.Gly278Asp) PEPD Nov 01, 1996 MedGen:C0268532,OMIM:170100 Prolidase deficiency germline 19 33401855 CTTCCTCTCTCCGCAGCCTGTTCGACATGGGCGGTGAGTATTACTGCTTCGCTTCCGACAT 587784139 168212 NM_022455.4(NSD1):c.5146+1G>A NSD1 Feb 08, 2013 MedGen:CN035106,OMIM:117550 Sotos syndrome 1 germline 5 177260169 ATGTTAGCTGGTGCTTTGTGTGCTCAGAAGGTAAGAAATCATTTCTTCCTCTATTTGTAGT 267606686 15182 NM_033409.3(SLC52A3):c.106G>A (p.Glu36Lys) SLC52A3 Mar 17, 2015 MedGen:CN029849,OMIM:211530 Brown-Vialetto-Van Laere syndrome 1 germline 20 765669 GAGCTGCCCCTGCTGGTGATGGAGCTGCCCGAGGGCTGGTACCTGCCCTCCTACCTCACGG 199469644 106404 NM_017415.2(KLHL3):c.1410G>A (p.Trp470Ter) KLHL3 - Gene:7830,MedGen:C1449844,OMIM:145260,Orphanet:ORPHA757,SNOMED CT:15689008 Pseudohypoaldosteronism, type 2 germline 5 137634077 GGAGCAGTACAACCCAGCGACCAATGAATGGATATACGTGGCGGACATGAGCACCCGCCGC 777022647 259691 NM_022336.3(EDAR):c.212G>A (p.Cys71Tyr) EDAR Dec 11, 2015 MedGen:CN517202 not provided germline 2 108929342 GCTACGGCACCAAAGACGAGGACTACGGCTGCGTCCCCTGCCCGGCGGAGAAGTTTTCCAA 587777446 141325 NM_022168.3(IFIH1):c.2336G>A (p.Arg779His) IFIH1 Aug 01, 2017 MedGen:C3888244,OMIM:615846;MedGen:CN517202 Aicardi-goutieres syndrome 7;not provided germline;maternal 2 162273913 ATGAACAAAAAGAAGTCATTAGTAAATTTCGCACTGGAAAAATAAATCTGCTTATCGCTAC 587777034 76334 NM_001098511.2(KIF2A):c.950G>A (p.Ser317Asn) KIF2A Jun 01, 2013 MedGen:C3809414,OMIM:615411 Cortical dysplasia, complex, with other brain malformations 3 germline 5 62361319 CTACATGCTTTGCTTATGGGCAGACTGGAAGTGGAAAAACTCATGTAAGTAATTTATTAAA 121908324 19812 NM_015627.2(LDLRAP1):c.65G>A (p.Trp22Ter) LDLRAP1 May 18, 2001 MedGen:C1863512,OMIM:603813 Hypercholesterolemia, autosomal recessive germline 1 25543763 TCCGGAGCCCCAGCTTGGCCAAGCAGAGCTGGGGGGGCGGTGGCCGGCACCGCAGTGAGTG 140826989 187005 NM_000152.4(GAA):c.1548G>A (p.Trp516Ter) GAA Oct 20, 2014 MedGen:C0017921,OMIM:232300,Orphanet:ORPHA365,SNOMED CT:124462004,SNOMED CT:237967002 Glycogen storage disease, type II germline;unknown 17 80110837 CCATGACCAGGTGCCCTTCGACGGCATGTGGATTGTAAGTGTGGCCCCCTCCTGAGCATCC 573006534 247578 NM_018480.5(TMEM126B):c.397G>A (p.Asp133Asn) TMEM126B Aug 01, 2016 MedGen:C1838979,OMIM:252010 Mitochondrial complex I deficiency germline 11 85634279 AAGCTTTTTGTAATTGATGCTTTGTATTCAGGTGAATTTAAATTCACTAATGTATAACGTA 587784572 171003 NM_004963.3(GUCY2C):c.2008G>A (p.Ala670Thr) GUCY2C Aug 13, 2014 MedGen:C0270246,OMIM:614665 Meconium ileus germline 12 14641142 AAAGGAGATGTGTACAGCTATGGGATCATCGCACAGGAGATCATCCTGCGGAAAGAAACCT 28931594 32059 NM_004004.5(GJB2):c.148G>A (p.Asp50Asn) GJB2 Jun 16, 2015 MedGen:C2673759,OMIM:220290;MedGen:C1865234,OMIM:602540;MedGen:C1835678,OMIM:148210;MedGen:CN517202 Deafness, autosomal recessive 1A;Hystrix-like ichthyosis with deafness;Keratitis-ichthyosis-deafness syndrome, autosomal dominant;not provided germline 13 20189434 GCAAAGGAGGTGTGGGGAGATGAGCAGGCCGACTTTGTCTGCAACACCCTGCAGCCAGGCT 28933985 28419 NM_000207.2(INS):c.266G>A (p.Arg89His) INS Jun 01, 1998 MedGen:C0342283,OMIM:616214 Hyperproinsulinemia germline 11 2159919 CCTTGGCCCTGGAGGGGTCCCTGCAGAAGCGTGGCATTGTGGAACAATGCTGTACCAGCAT 372380880 268634 NM_004260.3(RECQL4):c.1259-1G>A RECQL4 Nov 20, 2015 MedGen:C0032339,OMIM:268400,Orphanet:ORPHA2909,SNOMED CT:69093006 Rothmund-Thomson syndrome germline 8 144515458 CTCCCATTCTACCCTCTCCTGCCTGCCCCAGCAAGTGAGGAAGACACAGATGCTGTTGGGC 746195428 440175 NM_001080463.1(DYNC2H1):c.7663G>A (p.Val2555Met) DYNC2H1 Jun 01, 2017 MedGen:C0265275,Orphanet:ORPHA474,SNOMED CT:75049004 Jeune thoracic dystrophy maternal 11 103192219 CTTCATTTATTTGACATCATTTTAACATCAGTGTTTCAAGGAGATTGGGGCTCAGACATAT 267607518 188183 NM_002055.4(GFAP):c.259G>A (p.Val87Ile) GFAP Jan 08, 2015 MedGen:C0270726,OMIM:203450,Orphanet:ORPHA58,SNOMED CT:81854007 Alexander's disease germline 17 44915228 AATGACCGCTTTGCCAGCTACATCGAGAAGGTTCGCTTCCTGGAACAGCAAAACAAGGCGC -1 439917 NM_022124.5(CDH23):c.7312G>A (p.Glu2438Lys) CDH23 Jul 01, 2017 MedGen:C1832394,OMIM:601386 Deafness, autosomal recessive 12 germline 10 71799579 GATGCTGACTCAGGCAACTTTGCACTCATTGAGTACAGCCTTGGAGATGGAGAGAGCAAGT 1057519635 362625 NM_001330069.1(PRKD1):c.1798G>A (p.Gly600Arg) PRKD1 Feb 24, 2017 MedGen:CN240689,OMIM:617364 Congenital heart defects and ectodermal dysplasia germline 14 29626508 CAGATTTTTCCTGATGAAGTACTGGGTTCTGGACAGTTTGGAATTGTTTATGGAGGTAGGT -1 434336 NM_000527.4(LDLR):c.2253G>A (p.Arg751=) LDLR - MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11123286 AACCACCCGACCTGTTCCCGACACCTCCCGGCTGCCTGGGGCCACCCCTGGGCTCACCACG 797045222 207660 NM_006412.3(AGPAT2):c.406G>A (p.Gly136Arg) AGPAT2 Aug 06, 2015 MedGen:C1720862,OMIM:608594 Congenital generalized lipodystrophy type 1 germline 9 136677047 CTGGGGCCCGTGGGCCTCATCATGTACCTCGGGGGCGTCTTCTTCATCAACCGGCAGCGCT 72658200 32300 NM_000089.3(COL1A2):c.2575G>A (p.Gly859Ser) COL1A2 Jan 01, 1994 MedGen:C0268362,OMIM:259420,Orphanet:ORPHA216812,SNOMED CT:385483009 Osteogenesis imperfecta type III germline 7 94424345 CAGTATTTTTTCTCTATTTAGGGACCTCCTGGCACTCCAGGTCCTCAGGGTCTTCTTGGTG 762352115 229307 NM_001038603.2(MARVELD2):c.1331+1G>A MARVELD2 Jan 28, 2016 MedGen:CN043648,Orphanet:ORPHA87884 Nonsyndromic hearing loss and deafness germline 5 69432676 TAAACCTATCGTGATGCCCGACTATGTGGCGTGAGTGTCAGTCTGAATTCTTCCTCAAGGT 1085307647 415565 NM_004247.3(EFTUD2):c.1058+1G>A EFTUD2 Apr 14, 2017 MedGen:CN517202 not provided germline 17 44868286 CTGGGGTGACATCTACTTCAACCCTAAGACGTAAGTAGAGTATGGGACGTGACTTTCCAGA 121434372 17127 NM_000159.3(GCDH):c.1198G>A (p.Val400Met) GCDH Oct 05, 2017 MedGen:C0268595,OMIM:231670,Orphanet:ORPHA25,SNOMED CT:360416003,SNOMED CT:76175005;MedGen:CN517202 Glutaric aciduria, type 1;not provided germline;unknown 19 12897818 GGGGGGAATGGGATTTCTGACGAGTATCACGTGATCCGGCACGCCATGAACCTGGAGGCCG 121917756 27647 NM_005343.3(HRAS):c.187G>A (p.Glu63Lys) HRAS Mar 21, 2017 MedGen:C1968782;MedGen:CN517202 Myopathy, congenital, with excess of muscle spindles;not provided germline 11 533869 TTGGACATCCTGGATACCGCCGGCCAGGAGGAGTACAGCGCCATGCGGGACCAGTACATGC 886037945 248801 NM_001127221.1(CACNA1A):c.2137G>A (p.Ala713Thr) CACNA1A May 05, 2017 MedGen:C4310716,OMIM:617106;MedGen:CN517202 Epileptic encephalopathy, early infantile, 42;not provided germline;unknown 19 13303584 GACACCCTCCTGAATGTGTTCTTGGCCATCGCTGTGGACAATCTGGCCAACGCCCAGGAGC 137852874 17419 NM_000709.3(BCKDHA):c.745G>A (p.Gly249Ser) BCKDHA May 22, 1998 MedGen:C1855369 Maple syrup urine disease type 1A germline 19 41422262 GGGGCAGCCAGTGAGGGGGACGCCCATGCCGGCTTCAACTTCGCTGCCACACTTGAGTGCC 267607028 24293 NM_001037.4(SCN1B):c.448+88G>A SCN1B Nov 07, 2011 MedGen:C2748541,OMIM:612838;MedGen:CN517202 Brugada syndrome 5;not provided germline 19 35033827 ACAGATGGCAGGCAGTGGACAGGACAGGCTGGCTCTGTGCCTGGCCAGCCAACCGCCCACA 587777513 143245 NM_006439.4(MAB21L2):c.145G>A (p.Glu49Lys) MAB21L2 Jun 05, 2015 MedGen:C4014540,OMIM:615877,Orphanet:ORPHA424099 Microphthalmia/coloboma and skeletal dysplasia syndrome de novo;germline 4 150583174 TCGGACGTGCTCAAGGAAGTGGAGGTGCAGGAGCCTCGCTTCATCAGCTCCTTGAGCGAGA 281864962 47688 NM_024312.4(GNPTAB):c.637-1G>A GNPTAB May 10, 2012 MedGen:C2673377,OMIM:252500,Orphanet:ORPHA576 I cell disease not provided 12 101780287 AAAATGAGTTATGTTTTTCCCCTTATTTTAGACAACAGATAAAGAAGTCCCTGGATTAGTG 137853114 16049 NM_001031710.2(KLHL7):c.457G>A (p.Ala153Thr) KLHL7 Sep 23, 2011 MedGen:C2751986,OMIM:612943 Retinitis pigmentosa 42 germline 7 23140783 TTCTTTCTGTGTTTAGGTATAAGTGTGCTAGCGGAGTGTCTAGATTGTCCTGAATTGAAAG 193922703 44320 NM_020661.3(AICDA):c.251G>A (p.Trp84Ter) AICDA Feb 07, 2017 MedGen:C1720956,OMIM:605258,Orphanet:ORPHA101089;MedGen:CN517202 Immunodeficiency with hyper IgM type 2;not provided germline 12 8605391 GCTGCTACCGCGTCACCTGGTTCACCTCCTGGAGCCCCTGCTACGACTGTGCCCGACATGT 121918416 31109 NM_001146040.1(GLRA1):c.862G>A (p.Val288Met) GLRA1 Oct 04, 2012 MedGen:C1835614,OMIM:149400,Orphanet:ORPHA3197 Hyperekplexia hereditary germline 5 151851440 CCTGCTCGTGTGGGCCTAGGCATCACCACTGTGCTCACCATGACCACCCAGAGCTCCGGCT 1057521920 415635 NM_001127221.1(CACNA1A):c.526G>A (p.Val176Met) CACNA1A Oct 23, 2017 MedGen:CN517202 not provided germline 19 13452889 AGGAATGGCTGGAATGTCATGGACTTTGTGGTGGTGCTAACGGGGTAAGTGGCGCGTGCTA 373286166 172184 NM_004006.2(DMD):c.1812+1G>A DMD Oct 20, 2017 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001;MedGen:CN517202 Becker muscular dystrophy;Duchenne muscular dystrophy;not provided germline X 32573529 GAAATGTTATCAAGTCTTCAAAAACTGGCCGTATGTACTTTCTAGCTTTCAATGGTCTTAT 141957107 259733 NM_025243.3(SLC19A3):c.1314+1G>A SLC19A3 Mar 02, 2017 MedGen:CN517202 not provided germline 2 227688165 AGAGGGCTCAACTTGCCAGTCAGCATTCAGGTAAGCTGCAATACTTCTGTTTTCAACTAGG 121917986 79429 NM_006920.4(SCN1A):c.4135G>A (p.Val1379Met) SCN1A Aug 04, 2016 MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002;MedGen:CN517202 Severe myoclonic epilepsy in infancy;not provided de novo;germline;unknown 2 166002588 ACAACTGGTGACAGGTTTGACATCGAAGACGTGAATAATCATACTGATTGCCTAAAACTAA 121918587 28099 NM_000324.2(RHAG):c.836G>A (p.Gly279Glu) RHAG Sep 01, 1998 MedGen:C4016364 Rh-null hemolytic anemia, regulator type germline 6 49612506 AGGTTCACATTCAGAATGCCACCCTTGCTGGAGGAGTTGCTGTGGGCACTTGTGCGGATAT 1057516454 371519 NM_000543.4(SMPD1):c.1264-1G>A SMPD1 Apr 07, 2015 MedGen:CN517202 not provided germline 11 6393616 CCTGATTACCATCCTTAATTCTCCCTACTAGGTGCATATAATTGGCCACATTCCCCCAGGG 1064793732 406150 NM_006218.3(PIK3CA):c.1093G>A (p.Glu365Lys) PIK3CA Jun 25, 2015 MedGen:CN517202 not provided germline 3 179204536 TATGTTCGAACAGGTATCTACCATGGAGGAGAACCCTTATGTGACAATGTGAACACTCAAA 797045145 205545 NM_000410.3(HFE):c.506G>A (p.Trp169Ter) HFE Sep 17, 2015 MedGen:C3469186,OMIM:235200 Hemochromatosis type 1 germline 6 26091479 AACCCAGGGCCTGGCCCACCAAGCTGGAGTGGGAAAGGCACAAGATTCGGGCCAGGCAGAA 1057519090 361902 NM_001846.3(COL4A2):c.3490G>A (p.Gly1164Arg) COL4A2 Jan 01, 2016 MedGen:CN517202 not provided inherited 13 110492105 CCAGGGCTGACTGGGCCTCCAGGGTCGCAGGGAGAGCTGGGGCGGATTGGACTGCCTGGTG 387906621 38648 NM_001002295.1(GATA3):c.1025G>A (p.Cys342Tyr) GATA3 Sep 01, 2011 MedGen:C1840333,OMIM:146255,Orphanet:ORPHA2237 Barakat syndrome germline 10 8069573 ATGCCAATGGGGACCCTGTCTGCAATGCCTGTGGGCTCTACTACAAGCTTCACAATGTAAG 398123070 102599 NM_002700.2(POU4F3):c.977G>A (p.Arg326Lys) POU4F3 Jan 01, 2013 MedGen:C1865366,OMIM:602459 Deafness, autosomal dominant 15 germline 5 146340404 ACGTGGTGAGAGTCTGGTTCTGCAACCAGAGACAGAAACAGAAACGAATGAAGTATTCGGC 34940801 17811 NM_024312.4(GNPTAB):c.3335+1G>A GNPTAB May 10, 2012 MedGen:C2673377,OMIM:252500,Orphanet:ORPHA576 I cell disease germline 12 101757571 CAAAGCATATAAGGACAAAAACAAATATAGGTAAGTAGTACACGCATACTCCCTTTGTTTA 72558450 103226 NM_000531.5(OTC):c.806G>A (p.Gly269Glu) OTC - MedGen:CN517202 not provided unknown X 38408964 TATTAATTACAGACACTTGGATAAGCATGGGACAAGAAGAGGAGAAGAAAAAGCGGCTCCA -1 434136 NM_174936.3(PCSK9):c.142G>A (p.Glu48Lys) PCSK9 - MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 1 55039979 TACGAGGAGCTGGTGCTAGCCTTGCGTTCCGAGGAGGACGGCCTGGCCGAAGCACCCGAGC 121918000 28701 NM_000478.5(ALPL):c.535G>A (p.Ala179Thr) ALPL Aug 01, 2014 Human Phenotype Ontology:HP:0003239,MedGen:C0268412,OMIM:241500,Orphanet:ORPHA247651,SNOMED CT:55236002 Infantile hypophosphatasia germline;unknown 1 21564103 GTGAACCATGCCACCCCCAGCGCCGCCTACGCCCACTCGGCTGACCGGGACTGGTACTCAG 397509369 32238 NM_000090.3(COL3A1):c.2437G>A (p.Gly813Ser) COL3A1 Jan 25, 1989 MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189002343 ACTGGCCCTCCAGGACCTGCTGGTTTCCCTGGTGCTCCTGTAAGTGTGAATATTTATACAT 587777428 139376 NM_006087.3(TUBB4A):c.1228G>A (p.Glu410Lys) TUBB4A Dec 07, 2017 MedGen:C2676244,OMIM:612438,Orphanet:ORPHA139441 Leukodystrophy, hypomyelinating, 6 de novo;germline 19 6495271 GGCGAGGGCATGGACGAGATGGAGTTCACCGAGGCCGAGAGCAACATGAATGACCTGGTAT -1 487570 NM_000138.4(FBN1):c.4337-1G>A FBN1 Jul 15, 2016 MedGen:CN229799 Marfan Syndrome/Loeys-Dietz Syndrome/Familial Thoracic Aortic Aneurysms and Dissections germline 15 48470757 AGTTTTTTGCTTTTTTCTCCCTCCCCCCAAGATATTGATGAGTGCTCCCTTCCGAACATCT 587779626 107097 NM_000090.3(COL3A1):c.611G>A (p.Gly204Asp) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188988618 AGGGATCTCCAGGATACCAAGGACCCCCTGGTGAACCTGGGCAAGCTGGTCCTTCAGTAAG 387906598 38574 NM_004056.5(CA8):c.710G>A (p.Arg237Gln) CA8 Sep 21, 2011 MedGen:C2750509,OMIM:613227 Cerebellar ataxia, mental retardation, and dysequilibrium syndrome 3 germline 8 60222677 GCAGTGAAGGTGTCACCTGGATATTATTCCGATACCCTTTAACTATATCCCAGCTACAGGT 397514394 36388 NM_000060.4(BTD):c.932G>A (p.Ser311Asn) BTD Dec 04, 2012 MedGen:C0220754,OMIM:253260,Orphanet:ORPHA79241,SNOMED CT:8808004 Biotinidase deficiency not provided 3 15644788 TCCACCACCCAGTTCTGGGGATGACAGGAAGTGGCATACACACCCCTCTGGAGTCCTTTTG 886044555 275011 NM_001844.4(COL2A1):c.1636G>A (p.Gly546Ser) COL2A1 Apr 19, 2017 Human Phenotype Ontology:HP:0002655,MedGen:C0038015,OMIM:183900,Orphanet:ORPHA253;MedGen:CN517202 Spondyloepiphyseal dysplasia congenita;not provided germline 12 47985772 AGTGGTCTTGCTGGCCCCAAGGGAGCCAACGGTGACCCTGGCCGTCCTGGAGAACCTGGCC 398123131 98285 NM_000050.4(ASS1):c.794G>A (p.Arg265His) ASS1 Sep 01, 2016 MedGen:C0175683,OMIM:215700,Orphanet:ORPHA187 Citrullinemia type I germline;unknown 9 130480405 CTTCCCACAGGGGCAAGCATGGCGTGGGCCGTATTGACATCGTGGAGAACCGCTTCATTGG 63750828 96748 NM_000251.2(MSH2):c.998G>A (p.Cys333Tyr) MSH2 Oct 10, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:C2936783,OMIM:120435;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Lynch syndrome;Lynch syndrome I;not provided germline 2 47416351 CTCAGTCTCTGGCTGCCTTGCTGAATAAGTGTAAAACCCCTCAAGGACAAAGACTTGTTAA 121908348 19958 NM_022124.5(CDH23):c.6133G>A (p.Asp2045Asn) CDH23 Jan 01, 2001 MedGen:C1832394,OMIM:601386 Deafness, autosomal recessive 12 germline 10 71791215 CCCATCCTGGAGCTGCTGCTGCTGGCTGAGGACATCGGGCTGCTCAACAGCACGGCCCACC -1 481777 NM_014491.3(FOXP2):c.1267-1G>A FOXP2 Nov 30, 2017 MedGen:CN517202 not provided germline 7 114658065 TTTTTCCTGCCCTTCTCTTGGGCCTTTGCAGCTAAATCTGGTGTCTAGTGTCACCATGTCG 137962929 395637 NM_198428.2(BBS9):c.263+1G>A BBS9 Oct 24, 2016 MedGen:C0752166,OMIM:209900,Orphanet:ORPHA110,SNOMED CT:5619004 Bardet-Biedl syndrome germline 7 33152852 ACTTCAAGTGGAAGTAGGAAAGTTTGTTTCGTAAGTAAGCCCACTAATTCTGGTATTTTAC 200440536 445267 NM_000693.3(ALDH1A3):c.537+5G>A ALDH1A3 Nov 04, 2015 MedGen:CN517202 not provided germline 15 100893011 TTGGTGTCTGTGGGGCCATCACTCCAGTAAGTATGGCAGCCTTTCTCAGTAGATTCTATGT 121908622 21061 NM_005476.5(GNE):c.797G>A (p.Arg266Gln) GNE Oct 18, 2012 MedGen:C0342853,OMIM:269921,Orphanet:ORPHA3166,SNOMED CT:238051008 Sialuria germline 9 36234105 TAGGGAGCAAAGAGATGGTTCGAGTGATGCGGAAGAAGGGCATTGAGCATCATCCCAACTT 121907964 18950 NM_000520.5(HEXA):c.78G>A (p.Trp26Ter) HEXA Jan 01, 1993 MedGen:C0039373,OMIM:272800,Orphanet:ORPHA845,SNOMED CT:111385000 Tay-Sachs disease germline 15 72375895 CGCAGGACGGGCGACGGCCCTCTGGCCCTGGCCTCAGAACTTCCAAACCTCCGACCAGCGC 118192160 76840 NM_000540.2(RYR1):c.178G>A (p.Asp60Asn) RYR1 May 11, 2010 MedGen:C0751951,OMIM:117000,Orphanet:ORPHA597,SNOMED CT:43152001;MedGen:CN517202 Central core disease;not provided unknown 19 38442361 ATCCCCCTCCCACCCCAGAATGTGCCCCCCGATCTGGCCATCTGTTGCTTCGTCCTGGAGC 1064796543 408528 NM_015335.4(MED13L):c.5589-1G>A MED13L Feb 27, 2017 MedGen:CN517202 not provided germline 12 115975314 CCTTCCCCTTCCCCATTTCTTTATTTGTTAGGTCACGGAGGAGTAAAGTATCTGCACGTAA 312262864 49479 NM_003611.2(OFD1):c.1100G>A (p.Arg367Gln) OFD1 Feb 28, 2013 MedGen:C1510460,OMIM:311200,Orphanet:ORPHA2750,SNOMED CT:52868006 Oral-facial-digital syndrome not provided X 13753412 TGAAGGATGACTACATCATTAGAACTAATCGACTGATTGAAGATGAAAGGAAGAATAAAGG -1 443652 NM_000414.3(HSD17B4):c.1438-1G>A HSD17B4 Nov 17, 2015 MedGen:CN517202 not provided germline 5 119514980 TAAGATTTAACATGTAATGTCTTAATTTTAGGTAGCTGTAGCCATACCTAATAGACCTCCT 606231203 27810 NM_002354.2(EPCAM):c.491+1G>A EPCAM Jul 01, 2013 MedGen:C2750737,OMIM:613217,Orphanet:ORPHA92050 Diarrhea 5, with tufting enteropathy, congenital germline 2 47375300 AAAACCTTATGATAGTAAAAGTTTGCGGACGTAAGTGCAATTAAATGCATCATATTCTTGC 869025343 223780 NM_001145408.1(NONO):c.1131G>A (p.Ala377=) NONO Sep 21, 2016 MedGen:C4225417,OMIM:300967,Orphanet:ORPHA466791;MedGen:CN517202 Mental retardation, X-linked, syndromic 34;not provided germline X 71297938 GGAAGGATTCAAGGGAACCTTCCCTGATGCGGTATATCTCCCATGTGCCCGTGATGTACCA 786205224 188075 NM_021728.3(OTX2):c.259G>A (p.Glu87Lys) OTX2 Sep 01, 2016 MedGen:C1864690,OMIM:610125,Orphanet:ORPHA178364;MedGen:CN517202 Microphthalmia syndromic 5;not provided germline 14 56804202 GAGGAGGTGGCACTGAAAATCAACTTGCCCGAGTCGAGGGTGCAGGTAGGGCAGATGCAGG 886039574 259910 NM_002316.3(LMX1B):c.227G>A (p.Trp76Ter) LMX1B Jul 10, 2017 MedGen:CN517202 not provided germline 9 126615470 GCTTCCTGATGCGAGTCAACGAGTCGTCCTGGCACGAGGAGTGTTTGCAGTGCGCGGCGTG 397515942 51761 NM_000256.3(MYBPC3):c.2048G>A (p.Trp683Ter) MYBPC3 Jan 18, 2012 MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Primary familial hypertrophic cardiomyopathy;not provided germline 11 47339670 TCTCTGGGGACCCTGCTCCCACTGTGATCTGGCAGAAGGCTATCACGCAGGTACTGTGGGT 180177156 186663 NM_000030.2(AGXT):c.1049G>A (p.Gly350Asp) AGXT Nov 27, 2014 MedGen:C0268164,OMIM:259900,Orphanet:ORPHA93598,SNOMED CT:65520001 Primary hyperoxaluria, type I germline;unknown 2 240878128 TAGACCACTTCGACATTGAGATCATGGGTGGCCTTGGGCCCTCCACGGGGAAGGTGAGAGG 121918686 27591 NM_001128177.1(THRB):c.1033G>A (p.Gly345Ser) THRB May 01, 1994 MedGen:C2937288,OMIM:188570 Thyroid hormone resistance, generalized, autosomal dominant germline 3 24127610 GCAGTGACACGGGGCCAGCTGAAAAATGGGGGTCTTGGGGTGGTGTCAGACGCCATCTTTG 137853217 31039 NM_002890.2(RASA1):c.1619G>A (p.Cys540Tyr) RASA1 Dec 01, 2003 MedGen:C1842180,OMIM:608354,Orphanet:ORPHA137667 Capillary malformation-arteriovenous malformation germline 5 87369821 AATTTTTGTTTTTATTTTAAAGGCCAAACTGTTTTCAGATAGTAGTTCAGCACTTTAGTGA 886037661 107273 NM_001013703.3(EIF2AK4):c.860-1G>A EIF2AK4 Feb 01, 2014 MedGen:C0340848,OMIM:234810,SNOMED CT:234161007 Familial pulmonary capillary hemangiomatosis germline 15 39965685 GATTTAATTACACTTTCTGTTTAATGTGCAGGCAGTGATGAACAACTTGGAAAATTAGTCT 397515854 51599 NM_000138.4(FBN1):c.7606G>A (p.Gly2536Arg) FBN1 Aug 05, 2016 MedGen:CN229799;MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:CN517202 Marfan Syndrome/Loeys-Dietz Syndrome/Familial Thoracic Aortic Aneurysms and Dissections;Marfan syndrome;not provided germline 15 48421651 AATGAATGCACCTCTGACATCAATCTGTGCGGGTCTAAGGGCATTTGCCAGAACACTCCTG 397514031 15874 NM_000038.5(APC):c.423-1G>A APC Apr 25, 2016 MedGen:CN240755;MedGen:C2713442,OMIM:175100;MedGen:C0027672,SNOMED CT:699346009 Familial adenomatous polyposis;Familial adenomatous polyposis 1;Hereditary cancer-predisposing syndrome germline 5 112775628 AACGTACCTTTTTTTAAAAAAAAAAAAATAGGTCATTGCTTCTTGCTGATCTTGACAAAGA 1057518922 360814 NM_000329.2(RPE65):c.1338+1G>A RPE65 Nov 14, 2014 Human Phenotype Ontology:HP:0000512,MedGen:C1849688;Human Phenotype Ontology:HP:0000504,MedGen:C4025846;Human Phenotype Ontology:HP:0007875,MedGen:C0005754;Human Phenotype Ontology:HP:0000546,MedGen:C0035304 Abnormal electroretinogram;Abnormality of vision;Congenital blindness;Retinal degeneration unknown 1 68431281 CTTGGCTTGAATCACTTTGTTCCAGATAGGGTAATTAATCCTTCTTACTAATATTTGAACA 199474738 79199 NM_001042492.2(NF1):c.1885G>A (p.Gly629Arg) NF1 Oct 19, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003;MedGen:CN517202;MedGen:CN169374 Hereditary cancer-predisposing syndrome;Neurofibromatosis, type 1;not provided;not specified germline 17 31225134 AGAAGTTCCTGTCACTTTCTCCTTTTTTACGGGGTAGGATGTGATATTCCTTCTAGTGGAA 121912581 36168 NM_005359.5(SMAD4):c.1054G>A (p.Gly352Arg) SMAD4 Dec 04, 2012 na;MedGen:C1832942,OMIM:175050;MedGen:CN517202 JP and JP/HHT;Juvenile polyposis/hereditary hemorrhagic telangiectasia syndrome;not provided germline 18 51065521 CCTTCAAGCTGCCCTATTGTTACTGTTGATGGATACGTGGACCCTTCTGGAGGAGATCGCT 121912430 29828 NM_001111284.1(IGF1):c.226G>A (p.Val76Met) IGF1 May 01, 2005 MedGen:C1837475,OMIM:608747,Orphanet:ORPHA73272 Insulin-like growth factor I deficiency germline 12 102419637 AGCAGTCGGAGGGCGCCTCAGACAGGCATCGTGGATGAGTGCTGCTTCCGGAGCTGTGATC 104894858 25021 NM_002294.2(LAMP2):c.928G>A (p.Val310Ile) LAMP2 May 31, 2017 MedGen:C0878677,OMIM:300257,Orphanet:ORPHA34587,SNOMED CT:419097006;MedGen:CN517202 Danon disease;not provided germline X 120442599 AACATCAGCATGTATTTGGTTAATGGCTCCGGTAAGCAAAGCACTGGCCTGGGGAAAAAGA 527236103 152798 NM_000539.3(RHO):c.520G>A (p.Gly174Ser) RHO - Human Phenotype Ontology:HP:0000547,MeSH:D012174,MedGen:C0035334,OMIM:268000,Orphanet:ORPHA791,SNOMED CT:28835009 Retinitis pigmentosa not provided 3 129531034 GCGCTGGCCTGCGCCGCACCCCCACTCGCCGGCTGGTCCAGGTAATGGCACTGAGCAGAAG 119455956 17684 NM_000391.3(TPP1):c.1340G>A (p.Arg447His) TPP1 Aug 18, 2015 MedGen:C1876161,OMIM:204500,Orphanet:ORPHA228349;MedGen:CN517202 Ceroid lipofuscinosis neuronal 2;not provided germline 11 6615256 CACCATCCAGTTACTTCAATGCCAGTGGCCGTGCCTACCCAGATGTGGCTGCACTTTCTGA 587777187 106813 NM_176787.4(PIGN):c.963G>A (p.Gln321=) PIGN Mar 04, 2014 MedGen:C3279775,OMIM:614080,Orphanet:ORPHA280633 Multiple congenital anomalies-hypotonia-seizures syndrome 1 germline 18 62143306 GGAGAATTGGAAGAGGCTAGATGTCAATCAGGTATCCAGTTCGATTTTATTACATTCAAAT 398123770 100174 NM_003494.3(DYSF):c.1481-1G>A DYSF Sep 28, 2012 MedGen:C1850889,OMIM:253601,Orphanet:ORPHA268;MedGen:C1850808,OMIM:254130,Orphanet:ORPHA45448 Limb-girdle muscular dystrophy, type 2B;Miyoshi muscular dystrophy 1 germline 2 71549349 CTAACCCCTTTTCCATTTCTTTACGCTTCAGAGGAGCCTGCAGGTGCTGTCAAGCCTTCGA -1 444818 NM_000256.3(MYBPC3):c.2067+1G>A MYBPC3 Aug 09, 2017 MedGen:CN517202 not provided germline 11 47339650 ACTGTGATCTGGCAGAAGGCTATCACGCAGGTACTGTGGGTCCCTCCTCAGTCTCCCCATC 387907053 39876 NM_152722.4(HEPACAM):c.265G>A (p.Gly89Ser) HEPACAM Mar 07, 2016 MedGen:C3151355,OMIM:613925;MedGen:C3151356,OMIM:613926;MedGen:CN517202 Megalencephalic leukoencephalopathy with subcortical cysts 2a;Megalencephalic leukoencephalopathy with subcortical cysts 2b, remitting, with or without mental retardation;not provided germline 11 124924890 GTGGTGCAGTCCATTGGCACAGAGGTCATCGGCACCCTGCGGCCTGACTATCGAGACCGTA 1064796419 407276 NM_000089.3(COL1A2):c.1054G>A (p.Gly352Ser) COL1A2 Feb 24, 2017 MedGen:CN517202 not provided germline 7 94410260 ATTGAACCCTAGGGTGAGCCTGGTCCAGCTGGCTCCAAAGGAGAGAGCGGTAACAAGGGTG 893256143 372861 NM_000545.6(HNF1A):c.599G>A (p.Arg200Gln) HNF1A Jun 09, 2016 MedGen:CN517202 not provided germline 12 120993592 CAGGTGATGAGCTACCAACCAAGAAGGGGCGGAGGAACCGTTTCAAGTGGGGCCCAGCATC 794727143 191663 NM_003482.3(KMT2D):c.4265G>A (p.Trp1422Ter) KMT2D Apr 22, 2015 MedGen:CN030661,OMIM:147920 Kabuki syndrome 1 germline 12 49046762 AGATCACCAAGGTGATGCTGCTCAAGGGCTGGCGTTGTGTGGAGTGTATTGTGTGTGAGGT 730882099 181251 NM_000527.4(LDLR):c.1195G>A (p.Ala399Thr) LDLR Mar 25, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000;MedGen:CN517202 Familial hypercholesterolemia;not provided germline;not applicable 19 11113286 ACCTCGCTCCCCGGACCCCCAGGCTCCATCGCCTACCTCTTCTTCACCAACCGGCACGAGG 730880016 132729 NM_207036.1(TCF12):c.1838G>A (p.Arg613His) TCF12 Sep 02, 2013 MedGen:C3715051,OMIM:615314 Craniosynostosis 3 germline 15 57273122 GGATGGCTAACAATGCCAGAGAACGCTTACGCGTGCGGGATATTAATGAAGCATTCAAAGA 864309730 216034 NM_172250.2(MMAA):c.653G>A (p.Gly218Glu) MMAA Jan 07, 2016 MedGen:C1855109,OMIM:251100,Orphanet:ORPHA79310 Methylmalonic aciduria cblA type germline 4 145646076 TCAGGCCATCTCCTACTAGAGGAACTTTAGGAGGCGTGACAAGGACCACAAATGAAGCTAT 397514567 48319 NM_178012.4(TUBB2B):c.1249G>A (p.Asp417Asn) TUBB2B Feb 28, 2013 MedGen:C2750247,OMIM:610031 Polymicrogyria, asymmetric germline 6 3224840 GAGTTCACCGAGGCCGAGAGCAACATGAACGACCTGGTGTCCGAGTACCAGCAGTACCAGG 387906684 38841 NM_021007.2(SCN2A):c.3631G>A (p.Glu1211Lys) SCN2A Sep 20, 2017 MedGen:C1843140,OMIM:607745,Orphanet:ORPHA140927;MedGen:C3150987,OMIM:613721;MedGen:CN517202 Benign familial neonatal-infantile seizures;Early infantile epileptic encephalopathy 11;not provided de novo;germline 2 165367327 TGCTATAAGATAGTGGAGCACAATTGGTTCGAAACCTTCATTGTCTTCATGATTCTGCTGA 886044252 273992 NM_004369.3(COL6A3):c.6220G>A (p.Gly2074Ser) COL6A3 Jun 04, 2017 MedGen:CN029274,OMIM:158810;MedGen:CN033863,OMIM:254090 Bethlem myopathy 1;Ullrich congenital muscular dystrophy 1 germline 2 237360150 TGCCTTTGTCTCTCACAACAGGGTGAGCGTGGTCCGCCTGGTGTGAACGGCACTCAAGGTT 587779501 106943 NM_000090.3(COL3A1):c.3255+5G>A (p.Gly1068_Pro1085del) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189006995 GTCCTGCTGGTTCCCGAGGTGCTCCTGTAAGTTTTGTCATTTTTTGGTTTTATTTTGTTTT 137854601 24416 NM_198056.2(SCN5A):c.5350G>A (p.Glu1784Lys) SCN5A Jul 31, 2017 MedGen:C1142166,Orphanet:ORPHA130,SNOMED CT:418818005;MedGen:CN029323,OMIM:601144;MedGen:CN230736;MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MedGen:C0035828,OMIM:192500,Orphanet:ORPHA101016,SNOMED CT:20852007;MedGen:C1859062,OMIM:603830;MedGen:C0428908;MedGen:CN517202 Brugada syndrome;Brugada syndrome 1;Cardiovascular phenotype;Congenital long QT syndrome;Long QT syndrome 1;Long QT syndrome 3;Sinus node disease;not provided germline 3 38551022 AACTTCAGCGTGGCCACGGAGGAGAGCACCGAGCCCCTGAGTGAGGACGACTTCGATATGT 80356703 33889 NM_000083.2(CLCN1):c.1013G>A (p.Arg338Gln) CLCN1 Mar 29, 2017 MedGen:C0027127,Orphanet:ORPHA206973;MedGen:CN517202 Myotonia congenita;not provided germline 7 143331265 CCATCACTGCTCTGTTCAGAACCAATTTCCGAATGGATTTCCCCTTTGACCTGAAGGAACT 137852963 19591 NM_153638.3(PANK2):c.1412G>A (p.Ser471Asn) PANK2 Aug 01, 2001 MedGen:C0018523,OMIM:234200,Orphanet:ORPHA157850,SNOMED CT:2992000 Pigmentary pallidal degeneration germline 20 3912634 TTGGACTGCCAGGCTGGGCTGTGGCTTCAAGGTAAGGGGGCATGTGTGTTCTAAGAAATAC 794728166 197800 NM_000138.4(FBN1):c.1421G>A (p.Cys474Tyr) FBN1 Feb 09, 2014 MedGen:CN517202 not provided germline 15 48515434 GCTGCATTCCAACTCCTGGGAGTTACCGGTGTGAGTGCAACAAAGGGTTCCAGCTGGACCT 121912494 29561 NM_170707.3(LMNA):c.1585G>A (p.Ala529Thr) LMNA Nov 01, 2007 MedGen:C0432291,OMIM:248370,Orphanet:ORPHA2457,SNOMED CT:109419009;MedGen:CN517202 Mandibuloacral dysostosis;not provided germline 1 156137209 ACCTGGGGCTGCGGGAACAGCCTGCGTACGGCTCTCATCAACTCCACTGGGGAAGTAAGTA 117642173 21106 NM_004260.3(RECQL4):c.1391-1G>A RECQL4 Jan 31, 2000 MedGen:C0032339,OMIM:268400,Orphanet:ORPHA2909,SNOMED CT:69093006 Rothmund-Thomson syndrome germline 8 144515243 AAGTCATGGTGATCAACATCTGTGTCTGCAGAGACGCCGGCTGAGGTGTTCCAGGCCCTGG 121908639 21366 NM_000050.4(ASS1):c.970G>A (p.Gly324Ser) ASS1 Jul 24, 2017 MedGen:C0175683,OMIM:215700,Orphanet:ORPHA187 Citrullinemia type I germline;unknown 9 130489464 GGCTTGAAATTTGCTGAGCTGGTGTATACCGGTGCGTAAGACTCTATGGCTGCCCCCTCTA 397509376 32261 NM_000090.3(COL3A1):c.1869+5G>A COL3A1 Jan 01, 1995 MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188997394 GACCTCAGGGACCCCCAGGGCCTACTGTAAGTTCACTCATATAAAATTGGAGATGAAAATA 879255708 247725 NM_014191.3(SCN8A):c.4873G>A (p.Gly1625Arg) SCN8A Feb 19, 2016 MedGen:C3281191,OMIM:614558 Early infantile epileptic encephalopathy 13 germline 12 51806359 CTATTCCGAGTCATCCGATTGGCCCGTATTGGGCGCATCTTGCGTCTGATCAAAGGCGCCA 121909794 22789 NM_001017535.1(VDR):c.149G>A (p.Arg50Gln) VDR Sep 01, 1991 MedGen:C0268690,OMIM:277440,SNOMED CT:72831007 Vitamin D-dependent rickets, type 2 germline 12 47865175 CAGGGCAGGGTGTGTGCTCTCTCGGCAGGCGAAGCATGAAGCGGAAGGCACTATTCACCTG 893198212 451194 NM_000104.3(CYP1B1):c.1302G>A (p.Trp434Ter) CYP1B1 May 03, 2017 Human Phenotype Ontology:HP:0000557,MedGen:C0020302,OMIM:231300,Orphanet:ORPHA98976 Buphthalmos germline 2 38071052 GTGGTCTGTGAATCATGACCCACTGAAGTGGCCTAACCCGGAGAACTTTGATCCAGCTCGA 796052618 203798 NM_172107.3(KCNQ2):c.431G>A (p.Arg144Gln) KCNQ2 Jun 23, 2016 MedGen:C3150986,OMIM:613720,Orphanet:ORPHA439218;MedGen:CN517202 Early infantile epileptic encephalopathy 7;not provided de novo;germline 20 63445321 TCGTGGTGTTTGGCGTGGAGTACTTCGTGCGGATCTGGGCCGCAGGCTGCTGCTGCCGGTA 794728375 197238 NM_000238.3(KCNH2):c.1946-1G>A KCNH2 Jul 23, 2013 MedGen:CN517202 not provided germline 7 150951121 GGCTGACGGCCCCACGTGCCCACGCCCCCAGCCCTCATGTATGCTAGCATCTTCGGCAACG 1060499991 398357 NM_130799.2(MEN1):c.1412G>A (p.Trp471Ter) MEN1 Apr 19, 2016 MeSH:D018761,MedGen:C0025267,OMIM:131100,Orphanet:ORPHA652,SNOMED CT:30664006 Multiple endocrine neoplasia, type 1 germline 11 64804755 AGGCCGAGGCGGCCGAGGCCGAGGAGCCGTGGGGCGAGGAAGCCCGGGAAGGCCGGCGGCG -1 444803 NM_207122.1(EXT2):c.1182G>A (p.Trp394Ter) EXT2 Oct 23, 2017 MedGen:CN517202 not provided germline 11 44171619 AACAGCATTATTTTCTTTATAGGCCCGGTGGTTCTGGGAAGCGTACTTCCAGTCAATTAAA 312262740 49712 NM_025137.3(SPG11):c.2316+1G>A SPG11 Aug 02, 2016 MedGen:C1858479,OMIM:604360,Orphanet:ORPHA2822 Spastic paraplegia 11, autosomal recessive germline 15 44622727 ACAACTAATAAAAATATACGTGACTTTTTGGTAGGTAAAGGTGAGACTACATAGTATACAT 587777785 166196 NM_032374.4(APOPT1):c.163-1G>A APOPT1 Sep 04, 2014 MedGen:C0268237,OMIM:220110,Orphanet:ORPHA254905,SNOMED CT:67434000 Hepatic failure, early-onset, and neurologic disorder due to cytochrome C oxidase deficiency germline 14 103571622 TCATATGTTAATCCAATTTACTTTGTTAAAGGTCTCAAGATTCTGCCCTCCAAGAAAGTCT 886037825 260502 NM_001711.5(BGN):c.238G>A (p.Gly80Ser) BGN May 10, 2017 MedGen:C4310811,OMIM:300989;MedGen:CN118826,Orphanet:ORPHA91387 Meester-loeys syndrome;Thoracic aortic aneurysm and aortic dissection germline;maternal X 153504869 CACCTGCGGGTGGTTCAGTGCTCCGACCTGGGTTTGTCCCTGAGTGATGGGGAGCGGGGCA 121918585 28107 NM_006744.3(RBP4):c.278G>A (p.Gly93Asp) RBP4 Jan 01, 1999 MedGen:C3554593,OMIM:615147,Orphanet:ORPHA352718 Retinal dystrophy, iris coloboma, and comedogenic acne syndrome germline 10 93600470 GTAACTGGGACGTGTGCGCAGACATGGTGGGCACCTTCACAGACACCGAGGACCCTGCCAA 1131690832 420616 NM_144997.5(FLCN):c.1062+1G>A FLCN Dec 16, 2015 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 17 17219018 GTCTTCAAGTCCCTCCGGCACATGAGGCAGGTAGGCGGCAGGGGCACAGCGCATCAGGAGC 886039507 394347 NM_000038.5(APC):c.1312+5G>A APC Jun 17, 2017 MedGen:C2713442,OMIM:175100;MedGen:C0027672,SNOMED CT:699346009 Familial adenomatous polyposis 1;Hereditary cancer-predisposing syndrome germline 5 112819349 AGGCATGGACCAGGACAAAAATCCAAGTATGTTCTCTATAGTGTACATCGTAGTGCATGTT 121913348 29003 NM_004333.4(BRAF):c.1391G>A (p.Gly464Glu) BRAF May 13, 2016 MedGen:C0699790,OMIM:114500,SNOMED CT:269533000;Human Phenotype Ontology:HP:0005550,MeSH:D015451,MedGen:C0023434,OMIM:151400,SNOMED CT:277473004,SNOMED CT:51092000;MeSH:D009369,MedGen:C0027651,SNOMED CT:108369006;MedGen:CN166718,Orphanet:ORPHA98733;MedGen:CN517202 Carcinoma of colon;Chronic lymphocytic leukemia;Neoplasm;Rasopathy;not provided germline;somatic;unknown 7 140781617 ATGGGCAGATTACAGTGGGACAAAGAATTGGATCTGGATCATTTGGAACAGTCTACAAGGG 121909127 22675 NM_013435.2(RAX):c.575G>A (p.Arg192Gln) RAX Feb 01, 2004 MedGen:C1970237,OMIM:611038 Microphthalmia, isolated 3 germline 18 59269470 TGTGGTTCCAGAACCGACGGGCTAAGTGGCGGCGGCAGGAGAAGCTGGAAGTGTCCTCCAT 28938170 359622 NM_003023.4(SH3BP2):c.1258G>A (p.Gly420Arg) SH3BP2 Nov 14, 2016 MedGen:CN517202 not provided germline 4 2831587 CCCTGCCCCTCCAGGCGATCACCCCCCGATGGGCAGAGTTTCAGGAGCTTCTCCTTTGAAA 137852209 25824 NM_194277.2(FRMD7):c.252G>A (p.Val84=) FRMD7 Nov 01, 2006 MedGen:C1839580,OMIM:310700 Infantile nystagmus, X-linked germline X 132097298 TTTCAAATTTATGGTGAAATTTTTCCCAGTGGACCCTGGACATCTGCGGGAAGAACTTACA 727504241 175482 NM_000257.3(MYH7):c.2198G>A (p.Gly733Glu) MYH7 Sep 25, 2014 MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005 Primary familial hypertrophic cardiomyopathy germline 14 23425783 GCATCCTGAACCCAGCGGCCATCCCTGAGGGACAGTTCATTGATAGCAGGAAGGGGGCAGA 121918622 27921 NM_006920.4(SCN1A):c.4910G>A (p.Arg1637His) SCN1A Jul 10, 2015 MedGen:C1858673,OMIM:604403;MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002;MedGen:CN517202 Generalized epilepsy with febrile seizures plus, type 2;Severe myoclonic epilepsy in infancy;not provided germline 2 165992332 TCCGTCTTGCTAGGATTGGCCGAATCCTACGTCTGATCAAAGGAGCAAAGGGGATCCGCAC 121908889 21460 NM_003060.3(SLC22A5):c.506G>A (p.Arg169Gln) SLC22A5 Nov 29, 2016 MedGen:C0342788,OMIM:212140,Orphanet:ORPHA158,SNOMED CT:21764004;MedGen:CN517202 Renal carnitine transport defect;not provided germline 5 132384155 GTCACTCTCCTTTTCTTCCCAGGTTTGGCCGGAAGAATGTGCTGTTCGTGACCATGGGCAT 200491579 264796 NM_000359.2(TGM1):c.377G>A (p.Arg126His) TGM1 Mar 04, 2016 MedGen:CN517202 not provided germline 14 24261826 ACTTGCTGAGCTCGCGCTCGGACCAGAACCGCCGAGAGCACCACACAGACGAGTATGAGTA 121912685 33209 NM_001134.2(AFP):c.543G>A (p.Trp181Ter) AFP Mar 01, 2009 MedGen:C1863081,OMIM:615969,Orphanet:ORPHA168612 Alpha-fetoprotein deficiency germline 4 73442356 CTTCCTGTATGCACCTACAATTCTTCTTTGGGCTGCTCGCTATGACAAAATAATTCCATCT 879255594 227008 NM_130837.2(OPA1):c.1369G>A (p.Val457Met) OPA1 Aug 18, 2016 MedGen:C0221061,OMIM:210000,Orphanet:ORPHA1239,SNOMED CT:66988006 Abortive cerebellar ataxia germline 3 193643436 CAGAGGATGGTGCTTGTTGACTTACCAGGTGTGATTAATGTAAGTATATACAAAACATGTA 121912925 32266 NM_000090.3(COL3A1):c.2212G>A (p.Gly738Ser) COL3A1 Nov 26, 2016 MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188999560 CCTGGAGAAAGAGGAGGTCTTGGAAGTCCTGGTCCAAAGGGTGACAAGGTGTTGACTTGTT 886038949 258845 NM_000138.4(FBN1):c.6884G>A (p.Cys2295Tyr) FBN1 Jul 14, 2014 MedGen:CN118826,Orphanet:ORPHA91387 Thoracic aortic aneurysm and aortic dissection germline 15 48428459 TTCAATAAAATCAAACAGATGAGAATGAATGTCAGACGAAGCCAGGGATCTGTGAGAATGG 201128942 263760 NM_153816.5(SNX14):c.1108G>A (p.Glu370Lys) SNX14 Nov 14, 2016 MedGen:C4225355,OMIM:616354,Orphanet:ORPHA397709 Spinocerebellar ataxia, autosomal recessive 20 germline 6 85547112 GTGCACGTGTTGCAGTTTTGTTTGACTGTGGGTGAGGCTTACCTGTGTATTTTACGAAAGT 121909301 23205 NM_000436.3(OXCT1):c.971G>A (p.Gly324Glu) OXCT1 Sep 01, 2000 MedGen:C0342792,OMIM:245050,Orphanet:ORPHA832,SNOMED CT:238004006 Succinyl-CoA acetoacetate transferase deficiency germline 5 41803148 ATCTTTTTTTTCCAGCTAATTTGGGCATAGGAATCCCTCTCCTGGCCAGCAATTTTATCAG 104893860 23127 NM_153427.2(PITX2):c.399G>A (p.Trp133Ter) PITX2 Dec 01, 1996 MedGen:C3714873,OMIM:180500 Axenfeld-Rieger syndrome type 1 germline 4 110618542 CATGTACCCAGGCTATTCCTACAACAACTGGGCCGCCAAGGGCCTTACATCCGCCTCCCTA 74315389 23428 NM_000557.4(GDF5):c.1471G>A (p.Glu491Lys) GDF5 Sep 01, 2006 MedGen:C3809104,OMIM:615298 Symphalangism, proximal, 1b germline 20 35433944 TCTGCCAACAACGTGGTGTATAAGCAGTATGAGGACATGGTCGTGGAGTCGTGTGGCTGCA 864622488 485309 NM_000455.4(STK11):c.923G>A (p.Trp308Ter) STK11 Oct 31, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 19 1222987 AGGCGCCACTGCTTCTGGGCGTTTGCAGCTGGTTCCGGAAGAAACATCCTCCGGCTGAAGC 727504742 176316 NM_002294.2(LAMP2):c.1093+1G>A LAMP2 May 10, 2016 MedGen:C0878677,OMIM:300257,Orphanet:ORPHA34587,SNOMED CT:419097006;MedGen:CN517202 Danon disease;not provided germline X 120441729 TCAATGTGACACAAGGAAAGTATTCTACAGGTAAGAATCAAGCAAACTTCATTAATAATTT 28937320 24300 NM_001166107.1(HMGCS2):c.160G>A (p.Val54Met) HMGCS2 Apr 01, 2003 MedGen:C2751532,OMIM:605911,Orphanet:ORPHA35701 mitochondrial 3-hydroxy-3-methylglutaryl-CoA synthase deficiency germline 1 119764571 CTGGCCAAAACAGATACTTGGCCAAAGGACGTGGGCATCCTGGCCCTGGAGGTCTACTTCC 121913638 29144 NM_000257.3(MYH7):c.2146G>A (p.Gly716Arg) MYH7 Jun 19, 2017 MedGen:C3495498,OMIM:192600;Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202;MedGen:CN169374 Familial hypertrophic cardiomyopathy 1;Hypertrophic cardiomyopathy;Primary familial hypertrophic cardiomyopathy;not provided;not specified germline 14 23425980 AGGAAAGGCTTCCCCAACCGCATCCTCTACGGGGACTTCCGGCAGAGGTGGGTATGAGGGT 745516434 263973 NM_002016.1(FLG):c.2427G>A (p.Trp809Ter) FLG Jun 28, 2016 MedGen:CN517202 not provided germline 1 152312459 TCATAAACAGTCTGAGTCCTCCCATGGATGGACAGGGCCCAGCACTGGAGTAAGACAAGGA 5030849 15621 NM_000277.2(PAH):c.782G>A (p.Arg261Gln) PAH Aug 10, 2017 MedGen:C0031485,OMIM:261600,Orphanet:ORPHA716,SNOMED CT:154735006;MedGen:CN517202 Phenylketonuria;not provided germline;unknown 12 102852875 CTCGGGATTTCTTGGGTGGCCTGGCCTTCCGAGTCTTCCACTGCACACAGTACATCAGACA 777066716 371307 NM_203447.3(DOCK8):c.2971-1G>A DOCK8 Apr 21, 2015 MedGen:CN517202 not provided germline 9 396784 ATGTTGACATTTCCTCCATCCCCCTCCGCAGGTGAAAAGCATGGCCCAGCACGTACATAAC 113993982 27031 NM_002863.4(PYGL):c.1768+1G>A PYGL May 17, 2011 MedGen:C0017925,OMIM:232700,Orphanet:ORPHA369,SNOMED CT:237971004,SNOMED CT:29291001 Glycogen storage disease, type VI germline 14 50912155 ACTGTCTGCATGTGATCACGATGTACAACCGTGAGTCAGCCCTGTAGCCAACAAGCCCCCT 730881495 180825 NM_007294.3(BRCA1):c.4987-1G>A BRCA1 Apr 05, 2017 MedGen:C2676676,OMIM:604370;MedGen:CN517202;MedGen:CN169374 Breast-ovarian cancer, familial 1;not provided;not specified germline;unknown 17 43067696 CATGATAATGGAATATTTGATTTAATTTCAGATGCTCGTGTACAAGTTTGCCAGAAAACAC 267606746 32221 NM_001848.2(COL6A1):c.841G>A (p.Gly281Arg) COL6A1 May 17, 2017 MedGen:CN033863,OMIM:254090;MedGen:CN517202 Ullrich congenital muscular dystrophy 1;not provided germline 21 45989120 CGAGGCAAGCCGGGGCTCCCAGGAGAGAAGGGAGAAGCCGGAGATCCTGTGAGTGCCTGAC 121912891 32432 NM_001844.4(COL2A1):c.3508G>A (p.Gly1170Ser) COL2A1 Jun 01, 2007 MedGen:C0410480,OMIM:608805,SNOMED CT:203476003;Human Phenotype Ontology:HP:0005743,MedGen:C0023234,OMIM:150600,Orphanet:ORPHA2380,SNOMED CT:240241003 Avascular necrosis of the head of femur;Coxa plana germline 12 47976052 TCTCTCTTGCAGGGTCCTCCTGGCCCCGTCGGTCCCTCTGGCAAAGATGGTGCTAATGGAA 137853340 24171 NM_145649.4(GCNT2):c.683G>A (p.Arg228Gln) GCNT2 Mar 15, 2003 MedGen:C1292164 ADULT i BLOOD GROUP PHENOTYPE germline 6 10529594 GAGTGCTGCCTCCTGACCACGCTGTTGGACGGACTAAATACGTCCACCAAGAACTGTTAAA 111033595 23006 NM_130838.1(UBE3A):c.2304G>A (p.Trp768Ter) UBE3A Jun 05, 2015 MedGen:C0162635,OMIM:105830,Orphanet:ORPHA72,SNOMED CT:76880004 Angelman syndrome germline 15 25340219 TATTGTATTTTTTCTCATTAGGGAGTTCTGGGAAATCGTTCATTCATTTACAGATGAACAG 755218546 405663 NM_000463.2(UGT1A1):c.1084G>A (p.Gly362Ser) UGT1A1 Mar 21, 2017 MedGen:CN517202 not provided germline 2 233767936 GTTAAGTGGCTACCCCAAAACGATCTGCTTGGTATGTTGGGCGGATTGGATGTATAGGTCA 1057521096 367718 NM_000248.3(MITF):c.909G>A (p.Thr303=) MITF Dec 06, 2016 MedGen:CN517202 not provided germline 3 69964897 AGCTCATGGACTTTCCCTTATTCCATCCACGGGTCTCTGCTCTCCAGATTTGGTGAATCGG 587776522 15904 NR_029512.1(MIR96):n.13G>A MIR96 May 01, 2009 MedGen:C3888123,OMIM:613074 Deafness, autosomal dominant 50 germline 7 129774757 GCACCAGTGCCATCTGCTTGGCCGATTTTGGCACTAGCACATTTTTGCTTGTGTCTCTCCG 868953318 224816 NM_001135055.2(TKT):c.633G>A (p.Trp211Ter) TKT Jul 20, 2016 MedGen:C4310751,OMIM:617044 Short stature, developmental delay, and congenital heart defects germline 3 53233271 CCCTTACTCTCTGCCCCCTGTCCCCAGTTGGCATGCCATCATCGTGGATGGACACAGCGTG 113994106 32459 NM_001845.5(COL4A1):c.1583G>A (p.Gly528Glu) COL4A1 Mar 08, 2011 MedGen:C2673195,OMIM:611773,Orphanet:ORPHA73229 Angiopathy, hereditary, with nephropathy, aneurysms, and muscle cramps germline 13 110187283 CAGGGCTGATAGGCCAGCCAGGAGCCAAGGGGGAGCCTGGTGAGTTTTATTTCGACTTGCG -1 455195 NM_000426.3(LAMA2):c.1467+1G>A LAMA2 Jul 03, 2016 MedGen:CN117977 Laminin alpha 2-related dystrophy germline 6 129177867 GATCCTTGTTTTGGCCCCTGTATCTGCAAGGTACATTGTTTATTCCAGTAATGTCCCACTG 80358252 18013 NM_000271.4(NPC1):c.530G>A (p.Cys177Tyr) NPC1 Jan 23, 2015 MedGen:C3179455,OMIM:257220 Niemann-Pick disease type C1 germline;unknown 18 23561461 CAAGTAATGACAAGGCCCTGGGACTCCTGTGTGGGAAGGACGCTGACGCCTGTAATGCCAC 28935499 25150 NM_000132.3(F8):c.1172G>A (p.Arg391His) F8 Oct 01, 1989 na FACTOR VIII (OKAYAMA) germline X 154966525 ATGACAACTCTCCTTCCTTTATCCAAATTCGCTCAGTTGCCAAGAAGCATCCTAAAACTTG 1057516053 353953 NM_000089.3(COL1A2):c.1550G>A (p.Gly517Asp) COL1A2 Jun 22, 2015 MedGen:C0268362,OMIM:259420,Orphanet:ORPHA216812,SNOMED CT:385483009 Osteogenesis imperfecta type III germline 7 94413129 ACGGTGATAAAGGTCATGCTGGTCTTGCTGGTGCTCGGGTAGGTGCTAACTTGTGTACAGA 397514593 48390 NM_001083614.1(EARS2):c.286G>A (p.Glu96Lys) EARS2 Nov 20, 2012 MedGen:C3554079,OMIM:614924,Orphanet:ORPHA314051 Combined oxidative phosphorylation deficiency 12 germline 16 23552158 GGGGCAGCGGAGAATATTGAGGACATGCTGGAGTGGGCAGGTAAGCCTGGCAGAGAAAGGA 1057520567 367271 NM_000094.3(COL7A1):c.4928G>A (p.Gly1643Asp) COL7A1 Apr 28, 2015 MedGen:CN517202 not provided germline 3 48581129 AGGGTGAAGTTGGAGAGAAAGGTGACGAGGGTCCTCCGGTGAGACTCCTTCCCACTGTGGT 137852442 25313 NM_000132.3(F8):c.5399G>A (p.Arg1800His) F8 Jan 20, 2017 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008;MedGen:CN169374 Hereditary factor VIII deficiency disease;not specified germline X 154904998 TACAGGTAACTTTCAGAAATCAGGCCTCTCGTCCCTATTCCTTCTATTCTAGCCTTATTTC 137853012 20621 NM_001001486.1(ATP2C1):c.910G>A (p.Ala304Thr) ATP2C1 Jan 01, 2000 MedGen:C0085106,OMIM:169600,Orphanet:ORPHA2841,SNOMED CT:79468000 Familial benign pemphigus germline 3 130963981 TTTGTATATGTTGGTTATAGTTTGGCTGTAGCAGCAATTCCTGAAGGTCTCCCCATTGTGG 786205109 32859 NM_031226.2(CYP19A1):c.296+1G>A CYP19A1 Jun 01, 1997 MedGen:C0878680,OMIM:613546,Orphanet:ORPHA91 Aromatase deficiency germline 15 51236858 CTCTGGAGAGGAAACACTCATTATCAGCAAGTGAGTCTGTTCATAATCGAAGACATACTTT 104894423 17048 NM_000231.2(SGCG):c.787G>A (p.Glu263Lys) SGCG Jun 27, 2017 MedGen:C0410173,OMIM:253700,Orphanet:ORPHA353,SNOMED CT:240056002;MedGen:CN517202 Severe autosomal recessive muscular dystrophy of childhood - North African type;not provided germline 13 23324452 GGTCCCTCTGGCAGCTCACAGAGCCTCTACGAAATCTGTGTGTGTCCAGATGGGAAGCTGT 587783563 169882 NM_178151.2(DCX):c.557G>A (p.Arg186His) DCX Feb 08, 2013 Human Phenotype Ontology:HP:0002282,MedGen:C0008519 Heterotopia germline X 111401138 TTGTGCGCCCCAAGCTGGTTACCATCATCCGCAGTGGGGTGAAGCCTCGGAAGGCTGTGCG 587781629 150997 NM_000059.3(BRCA2):c.1909+1G>A BRCA2 Jul 13, 2017 MedGen:C2676676,OMIM:604370;MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 1;Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline 13 32333388 CACCACTTACATTTGCAAATGCTGATTCAGGTACCTCTGTCTTTTTTTTTTTGTAAATAGT 386134162 51327 NM_002739.4(PRKCG):c.341G>A (p.Cys114Tyr) PRKCG Apr 18, 2013 MedGen:C1854369,OMIM:605361,Orphanet:ORPHA98763 Spinocerebellar ataxia 14 not provided 19 53889693 GCCTGCATAGCTACAGCAGCCCCACCTTCTGCGACCACTGTGGCTCCCTCCTCTACGGGCT 199472708 67753 NM_000218.2(KCNQ1):c.686G>A (p.Gly229Asp) KCNQ1 Jan 01, 2014 MedGen:C1837014,OMIM:607554;MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MedGen:CN517202 Atrial fibrillation, familial, 3;Congenital long QT syndrome;not provided germline 11 2572015 CCTCAGCCCCACACCATCTCCTTCGCAGGGGCATCCGCTTCCTGCAGATCCTGAGGATGCT 797044809 204266 NM_000084.4(CLCN5):c.836G>A (p.Trp279Ter) CLCN5 Sep 25, 2014 MedGen:C1848336,OMIM:300009 Dent disease 1 germline X 50086359 TCAGCTACTATTTTCCCCTCAAAACATTGTGGCGTTCATTCTTTGCTGCCTTGGTGGCAGC 28940294 17310 NM_014874.3(MFN2):c.839G>A (p.Arg280His) MFN2 Apr 07, 2017 MedGen:CN043576;MedGen:C1836485,OMIM:609260,Orphanet:ORPHA99947;MedGen:CN517202 Charcot-Marie-Tooth disease, type 2;Charcot-Marie-Tooth disease, type 2A2A;not provided germline 1 12001423 GGCTCCAGGTGCGGCGGCAGCACATGGAGCGTTGTACCAGCTTCCTGGTGGATGAGCTGGG 386134134 51301 NM_000096.3(CP):c.146+1G>A CP Apr 18, 2013 MedGen:C0878682,OMIM:604290,Orphanet:ORPHA48818,SNOMED CT:124224004 Deficiency of ferroxidase not provided 3 149221646 TGGGGAAAAGAAACTTATTTCTGTTGACACGTAAGTCACTATTTTTATTGTTTATAGACCA 879254600 245669 NM_000527.4(LDLR):c.626G>A (p.Cys209Tyr) LDLR Mar 30, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline;inherited 19 11105532 CCTTCGAGTTCCACTGCCTAAGTGGCGAGTGCATCCACTCCAGCTGGCGCTGTGATGGTGG 869320686 205685 NM_006767.3(LZTR1):c.742G>A (p.Gly248Arg) LZTR1 Oct 27, 2016 MedGen:C4225280,OMIM:616564;MedGen:CN517202 Noonan syndrome 10;not provided germline 22 20990476 GACAAGATGTTTGTATTCTCTGGGCAAAGCGGAGCCAAAATAACCAACAACCTCTTCCAGT 121912551 29874 NM_000883.3(IMPDH1):c.1057G>A (p.Val353Ile) IMPDH1 Mar 01, 2002 MedGen:C1867299,OMIM:180105 Retinitis pigmentosa 10 germline 7 128398431 TACCGTCTGGACCTGCTCACCCAGGCGGGCGTCGACGTCATAGTCTTGGTAAGGCCCCCGC 397509422 75121 NM_021971.2(GMPPB):c.1000G>A (p.Asp334Asn) GMPPB Jan 01, 2016 MedGen:C3809216,OMIM:615350;MedGen:C3809221,OMIM:615351;MedGen:C3714932,OMIM:615352,Orphanet:ORPHA363623 Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type a, 14;Muscular dystrophy-dystroglycanopathy (congenital with mental retardation), type b, 14;Muscular dystrophy-dystroglycanopathy (limb-girdle), type c, 14 germline 3 49721835 ACAGTGCTGGGTGAGGACGTCATAGTTAATGATGAGCTCTACCTCAACGGAGCCAGCGTGC 1060499703 384472 NM_014625.3(NPHS2):c.452-1G>A NPHS2 - MedGen:C1868672,OMIM:600995,Orphanet:ORPHA656 Nephrotic syndrome, idiopathic, steroid-resistant germline 1 179559762 TTATCTGTCACTTCCTCCTCCTCTCTTTTAGGTCTTTTCTTTTTTTTGCCCTGCCTGGATA 763449629 197710 NM_000138.4(FBN1):c.4096G>A (p.Glu1366Lys) FBN1 Jun 30, 2017 MedGen:CN229799;MedGen:CN517202 Marfan Syndrome/Loeys-Dietz Syndrome/Familial Thoracic Aortic Aneurysms and Dissections;not provided germline 15 48474369 TGATATAACCTTTTTCTATAAGATCTGGACGAATGTTCCAATGGAACCCATATGTGCAGCC 796052356 202873 NM_017882.2(CLN6):c.665+1G>A CLN6 May 05, 2014 MedGen:CN517202 not provided germline 15 68209636 CCTGGTGGCACCCAGTGGCCTGTACTACTGGTGAGTGGACATCAGCATGGGGGCAGAGGCA 886039713 260141 NM_013275.5(ANKRD11):c.1652G>A (p.Trp551Ter) ANKRD11 Aug 15, 2016 MedGen:CN517202 not provided germline 16 89284890 AGCACACCAAGCACTGGCGGACAGACAATTGGAAAACCATTTCTTCCCCGGCTTGGTCAGA 137852474 25373 NM_000132.3(F8):c.6968G>A (p.Arg2323His) F8 Jan 01, 1995 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154837685 TGAACTCTCTAGACCCACCGTTACTGACTCGCTACCTTCGAATTCACCCCCAGAGTTGGGT 121917753 27919 NM_021007.2(SCN2A):c.3956G>A (p.Arg1319Gln) SCN2A Apr 27, 2017 MedGen:C1843140,OMIM:607745,Orphanet:ORPHA140927;MedGen:CN517202 Benign familial neonatal-infantile seizures;not provided germline 2 165373331 GAGCTCTGAGGCCACTGAGAGCTTTGTCCCGGTTTGAAGGAATGAGGGTAAGACTGAATGC 200934080 411494 NM_032121.5(MAGT1):c.110G>A (p.Trp37Ter) MAGT1 Jul 14, 2015 MedGen:CN517202 not provided germline X 77895397 AAGGGAGAGGAGCGAACATGGCAGCGCGTTGGCGGTTTTGGTGTGTCTCTGTGACCATGGT 63751711 95792 NM_000249.3(MLH1):c.677G>A (p.Arg226Gln) MLH1 Sep 25, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0009405,Orphanet:ORPHA443090;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:C1333991,OMIM:609310;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Hereditary nonpolyposis colon cancer;Lynch syndrome;Lynch syndrome II;not provided germline;unknown 3 37012099 TTCGCTCCATCTTTGGAAATGCTGTTAGTCGGTATGTCGATAACCTATATAAAAAAATCTT 80359013 46680 NM_000059.3(BRCA2):c.7878G>A (p.Trp2626Ter) BRCA2 Jun 11, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline;somatic;unknown 13 32362595 TAGAATTTGGGTTTATAATCACTATAGATGGATCATATGGAAACTGGCAGCTATGGAATGT 121908479 20819 NM_014270.4(SLC7A9):c.508G>A (p.Val170Met) SLC7A9 Jan 01, 2005 Human Phenotype Ontology:HP:0003131,MedGen:C0010691,OMIM:220100,Orphanet:ORPHA214,SNOMED CT:85020001 Cystinuria germline 19 32862557 GTGTTCATCTCGACAGTGAACTCACTGAGCGTGCGGCTGGGAAGCTACGTCCAGAACATCT -1 427917 NM_004543.4(NEB):c.1471-1G>A NEB Sep 01, 2015 MedGen:CN187052 Nemaline myopathy 2, autosomal recessive germline 2 151696736 TACTAAACCAAATGCCTTTGCTTCCCCACAGCACACCTACAAAGTCCATCCAGATAAGACA 1057520208 364254 NM_000314.6(PTEN):c.254-1G>A PTEN Sep 12, 2017 MedGen:C1959582,OMIM:601728,Orphanet:ORPHA306498;MedGen:CN517202 PTEN hamartoma tumor syndrome;not provided germline 10 87933012 TTCTTATTCTGAGGTTATCTTTTTACCACAGTTGCACAATATCCTTTTGAAGACCATAACC 281865553 102983 NM_000531.5(OTC):c.1005G>A (p.Met335Ile) OTC - MedGen:CN517202 not provided unknown X 38411999 AGAGGCAGAAAACAGAAAGTGGACAATCATGGTAAGCAAGAAACAAGGAATGGAGGATAAG 74315356 17445 NM_032409.2(PINK1):c.1311G>A (p.Trp437Ter) PINK1 Sep 01, 2008 MedGen:C1853833,OMIM:605909 Parkinson disease 6, autosomal recessive early-onset germline 1 20649054 AGTGATTGACTACAGCAAGGCTGATGCCTGGGCAGTGGGAGCCATCGCCTATGAAATCTTC 11540652 27395 NM_000546.5(TP53):c.743G>A (p.Arg248Gln) TP53 Jul 17, 2017 Human Phenotype Ontology:HP:0004808,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:ORPHA519,SNOMED CT:17788007;Human Phenotype Ontology:HP:0030078,MeSH:C538231,MedGen:C0152013;MedGen:C0007112;MedGen:C0278701;Human Phenotype Ontology:HP:0010796,MedGen:C0677865;Human Phenotype Ontology:HP:0011459,MedGen:C0152018,Orphanet:ORPHA70482;Human Phenotype Ontology:HP:0005550,MeSH:D015451,MedGen:C0023434,OMIM:151400,SNOMED CT:277473004,SNOMED CT:51092000;MeSH:D015179,MedGen:CN236642;Human Phenotype Ontology:HP:0100843,MeSH:D005909,MedGen:C0017636,SNOMED CT:63634009;MedGen:C2239176,OMIM:114550,Orphanet:ORPHA88673,SNOMED CT:187769009,SNOMED CT:25370001;MedGen:C0027672,SNOMED CT:699346009;MedGen:C0085390,Orphanet:ORPHA524,SNOMED CT:428850001;Gene:553989,MedGen:C1835398,OMIM:151623;MedGen:C1836482,OMIM:609265;MedGen:C0346629;MeSH:C562393,MedGen:C0151779,SNOMED CT:93655004;MedGen:C0153574,Orphanet:ORPHA213569;Human Phenotype Ontology:HP:0002885,MeSH:D008527,MedGen:C0025149,OMIM:155255,Orphanet:ORPHA616;Human Phenotype Ontology:HP:0006775,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:ORPHA29073,SNOMED CT:109989006,SNOMED CT:55921005;MeSH:D009190,MedGen:C0026986,OMIM:614286;MeSH:D009369,MedGen:C0027651,SNOMED CT:108369006;Human Phenotype Ontology:HP:0030692,MeSH:D001932,MedGen:C0006118,SNOMED CT:126952004;Human Phenotype Ontology:HP:0100013,MeSH:D001943,MedGen:C1458155,Orphanet:ORPHA180250,SNOMED CT:126926005;MedGen:C0279663;Human Phenotype Ontology:HP:0006725,MedGen:C0281361;Human Phenotype Ontology:HP:0100242,MedGen:C1261473;Gene:7864,Human Phenotype Ontology:HP:0030357,MeSH:D055752,MedGen:C0149925,OMIM:182280,Orphanet:ORPHA70573;Human Phenotype Ontology:HP:0030359,MedGen:C0149782;MeSH:C535575,MedGen:C1168401,OMIM:275355,Orphanet:ORPHA67037;Human Phenotype Ontology:HP:0006739,MedGen:C0553723;Human Phenotype Ontology:HP:0006740,MedGen:C0279680;MedGen:C0280630;MedGen:CN517202 Acute myeloid leukemia;Adenocarcinoma of lung;Adenocarcinoma of prostate;Adenocarcinoma of stomach;Brainstem glioma;Carcinoma of esophagus;Chronic lymphocytic leukemia;Colorectal Neoplasms;Glioblastoma;Hepatocellular carcinoma;Hereditary cancer-predisposing syndrome;Li-Fraumeni syndrome;Li-Fraumeni syndrome 1;Li-Fraumeni syndrome 2;Malignant Colorectal Neoplasm;Malignant melanoma of skin;Malignant neoplasm of body of uterus;Medulloblastoma;Multiple myeloma;Myelodysplastic syndrome;Neoplasm;Neoplasm of brain;Neoplasm of the breast;Ovarian Serous Cystadenocarcinoma;Pancreatic adenocarcinoma;Sarcoma;Small cell lung cancer;Squamous cell carcinoma of lung;Squamous cell carcinoma of the head and neck;Squamous cell carcinoma of the skin;Transitional cell carcinoma of the bladder;Uterine Carcinosarcoma;not provided germline;maternal;somatic;unknown 17 7674220 GTAACAGTTCCTGCATGGGCGGCATGAACCGGAGGCCCATCCTCACCATCATCACACTGGA 104894035 28662 NM_004577.3(PSPH):c.94G>A (p.Asp32Asn) PSPH Feb 01, 2004 MedGen:C1291463,OMIM:614023,Orphanet:ORPHA79350,SNOMED CT:124432005 Deficiency of phosphoserine phosphatase germline 7 56021119 GACAGCACGGTCATCAGAGAAGAAGGAATCGATGAGCTAGCCAAAATCTGTGGCGTTGAGG 121912909 32296 NM_000089.3(COL1A2):c.1739G>A (p.Gly580Asp) COL1A2 Nov 15, 1992 MedGen:C0268360,OMIM:166210,SNOMED CT:86470003 Osteogenesis imperfecta, recessive perinatal lethal germline 7 94415245 GTTTTGTCTAGGGTCTCCATGGTGAGTTTGGTCTCCCTGGTCCTGCTGGTCCAAGAGTAAG 267607201 33486 NM_006563.4(KLF1):c.973G>A (p.Glu325Lys) KLF1 Jan 01, 2013 MedGen:C3150926,OMIM:613673,Orphanet:ORPHA293825 Congenital dyserythropoietic anemia, type IV germline 19 12885001 GGCTGCGGCTGGAGATTCGCGCGCTCGGACGAGCTGACCCGCCACTACCGGAAACACACGG 121908868 21480 NM_000369.2(TSHR):c.1228G>A (p.Asp410Asn) TSHR Dec 01, 1996 MedGen:C3493776,OMIM:275200 Hypothyroidism, congenital, nongoitrous, 1 germline 14 81143286 CCCAAGTCCGATGAGTTCAACCCGTGTGAAGACATAATGGGCTACAAGTTCCTGAGAATTG 1064794242 406610 NM_001182.4(ALDH7A1):c.177G>A (p.Trp59Ter) ALDH7A1 Apr 05, 2017 MedGen:CN517202 not provided germline 5 126595022 GGAAAACGAGGGCGTGTATAATGGAAGCTGGGGAGGCCGGGGAGAGGTACGCGGGCGCTCA 180177252 200527 NM_000030.2(AGXT):c.646G>A (p.Gly216Arg) AGXT Nov 27, 2014 MedGen:C0268164,OMIM:259900,Orphanet:ORPHA93598,SNOMED CT:65520001 Primary hyperoxaluria, type I germline 2 240874028 GGCTCCCAGAAGGCCCTGAACGCCCCTCCAGGGACCTCGCTCATCTCCTTCAGTGACAAGG 786205859 189176 NM_024665.5(TBL1XR1):c.209G>A (p.Gly70Asp) TBL1XR1 May 29, 2015 MedGen:C0795942,OMIM:270710,OMIM:616944,Orphanet:ORPHA2823 Fitzsimmons-Guilbert syndrome germline 3 177051722 CTTCTCTCACAATTTTCCAAATCCAGGATGGTACCTTGTTTGATGGTCGACCAATAGAGTC 372893383 99078 NM_000512.4(GALNS):c.1559G>A (p.Trp520Ter) GALNS Dec 14, 2012 MedGen:C0086651,OMIM:253000,Orphanet:ORPHA309297,SNOMED CT:7259005 Mucopolysaccharidosis, MPS-IV-A germline 16 88814449 CTCCAGAATCCATTCCCAAGAAGTGCCTCTGGTCCCACTAGCACCTGCGCAGACTCAGGCC 587783399 170097 NM_003159.2(CDKL5):c.146-1G>A CDKL5 Feb 08, 2013 MedGen:C1839333,OMIM:300672 Early infantile epileptic encephalopathy 2 germline X 18575353 TTTAGTCTCTTCACCATTGTTTACATTCTAGAAAATGAAGAAGTCAAAGAAACGACTTTAC 72645333 32323 NM_000088.3(COL1A1):c.824G>A (p.Gly275Asp) COL1A1 Oct 03, 1997 MedGen:C0268360,OMIM:166210,SNOMED CT:86470003 Osteogenesis imperfecta, recessive perinatal lethal germline 17 50196651 TCCTGCTTTAGGGTTTCAGTGGTTTGGATGGTGCCAAGGGAGATGCTGGTCCTGCTGGTCC 587779543 106993 NM_000090.3(COL3A1):c.2185G>A (p.Gly729Arg) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188999533 GCTGGTACTCCTGGTCTGCAAGGAATGCCTGGAGAAAGAGGAGGTCTTGGAAGTCCTGGTC 754786373 424951 NM_015263.3(DMXL2):c.7247G>A (p.Arg2416His) DMXL2 Aug 07, 2017 MedGen:CN381219,OMIM:617605 DEAFNESS, AUTOSOMAL DOMINANT 71 germline 15 51471365 CTGTCCTTTCTGAAGACATAGATAAACACCGTAGGAGATTTAACATGAGAATGCTCGTCCC 121908305 19357 NM_001005741.2(GBA):c.1090G>A (p.Gly364Arg) GBA Mar 07, 2014 MedGen:C0268250,OMIM:230900,Orphanet:ORPHA77260,SNOMED CT:12246008;MedGen:C1961835,OMIM:230800,SNOMED CT:62201009 Acute neuronopathic Gaucher's disease;Gaucher's disease, type 1 germline 1 155236379 GACTTTCTGGCTCCAGCCAAAGCCACCCTAGGGGAGACACACCGCCTGTTCCCCAACACCA 782175860 360446 NM_152296.4(ATP1A3):c.2116G>A (p.Gly706Arg) ATP1A3 Oct 19, 2016 MedGen:CN517202 not provided germline 19 41975776 TCCCTCCAGGGTGCAATTGTGGCTGTGACCGGGGATGGTGTGAACGACTCCCCCGCTCTGA 794726836 187774 NM_001165963.1(SCN1A):c.3550+1G>A SCN1A Dec 20, 2014 MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002 Severe myoclonic epilepsy in infancy de novo 2 166015606 CTCTTGAACCAGAAGCTTGTTTCACTGAAGGTAAAGAAAAGAATCCTAATGTTAATCTTTC 79891110 32671 NM_000719.6(CACNA1C):c.1216G>A (p.Gly406Arg) CACNA1C Apr 11, 2017 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MeSH:D008133,MedGen:C0023976,SNOMED CT:9651007;MedGen:C1832916,OMIM:601005,Orphanet:ORPHA65283;MedGen:CN517202 Congenital long QT syndrome;Long QT syndrome;Timothy syndrome;not provided germline 12 2504944 GTACTTAACTTGGTTCTCGGTGTGCTTAGCGGGTAAGCAGGACCAAGGAAAAAGGTCTTGA 111033553 32518 NM_000493.3(COL10A1):c.1784G>A (p.Gly595Glu) COL10A1 Dec 01, 1998 MedGen:C0265289,OMIM:156500,Orphanet:ORPHA174,SNOMED CT:29248006 Metaphyseal chondrodysplasia, Schmid type germline 6 116120332 GGACTGGAATCTTTACTTGTCAGATACCAGGAATATACTATTTTTCATACCACGTGCATGT 769268803 259865 NM_000162.3(GCK):c.766G>A (p.Glu256Lys) GCK Feb 07, 2017 MedGen:CN517202 not provided germline 7 44147747 GGGGACGAGGGCCGCATGTGCGTCAATACCGAGTGGGGCGCCTTCGGGGACTCCGGCGAGC 875989837 227457 NM_001007593.2(SMPD1):c.949G>A (p.Val317Met) SMPD1 May 20, 2015 MedGen:C0268242,OMIM:257200,Orphanet:ORPHA77292,SNOMED CT:52165006 Niemann-Pick disease, type A inherited 11 6392017 TTCCTGGGGCCAGTGCCAGTGTACCCTGCTGTGGGTAACCATGAAAGCACACCTGTCAATA 797045993 209112 NM_006306.3(SMC1A):c.2369G>A (p.Arg790Gln) SMC1A Jun 07, 2017 MedGen:C1802395,OMIM:300590,SNOMED CT:55016009 Congenital muscular hypertrophy-cerebral syndrome germline X 53403617 TTTGTCGGGAGATTGGTGTGCGCAACATCCGGGAGTTTGAGGAAGAAAAGGTGAAACGGCA 66626662 26042 NM_000531.5(OTC):c.484G>A (p.Gly162Arg) OTC Jul 01, 1992 MedGen:C0268542,OMIM:311250,Orphanet:ORPHA664,SNOMED CT:80908008;MedGen:CN517202 Ornithine carbamoyltransferase deficiency;not provided germline;unknown X 38401372 GCTAAAGAAGCATCCATCCCAATTATCAATGGGCTGTCAGATTTGTACCATCCTATCCAGA 368765949 172177 NM_000256.3(MYBPC3):c.3642G>A (p.Trp1214Ter) MYBPC3 Jan 26, 2017 MedGen:C1861862,OMIM:115197;Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569;MedGen:CN517202 Familial hypertrophic cardiomyopathy 4;Hypertrophic cardiomyopathy;not provided germline 11 47332244 TTTACCTTATTTATAGCCCAAGATTTCCTGGTTCAAGAATGGCCTGGACCTGGGAGAAGAC 886037947 248805 NM_017739.3(POMGNT1):c.466G>A (p.Glu156Lys) POMGNT1 Sep 20, 2016 MedGen:C4310704,OMIM:617123 Retinitis pigmentosa 76 germline 1 46195879 AAACGTGTGTTTGACACGTACTCACCTCATGAGGATGAGGCCATGGTGCTATTCCTCAACA 587779449 106892 NM_000090.3(COL3A1):c.2941G>A (p.Gly981Arg) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189005359 TTTTCATTCCTTTGTATACAGGGTGAAAGTGGGAAACCAGGAGCTAACGGTCTCAGTGGAG 148438059 215094 NM_001218.4(CA12):c.908-1G>A CA12 Oct 20, 2015 MedGen:C1840437,OMIM:143860 Hyperchlorhidrosis, isolated germline 15 63327234 ATGTAATGTGTGCCCTCTACCTCTTCACCAGGCATCATCCTCTCACTGGCCCTGGCTGGCA 886041779 264685 NM_003482.3(KMT2D):c.13999+1G>A KMT2D May 12, 2016 MedGen:CN517202 not provided germline 12 49030279 CTGCCCGGGATAGTGAAAGGGCACTGAGGGGTAAGTCAAGAGCAGATGCCACCCCTGGTGG -1 452681 NM_000249.3(MLH1):c.1667+1G>A MLH1 Jun 19, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0009405,Orphanet:ORPHA443090 Hereditary cancer-predisposing syndrome;Hereditary nonpolyposis colon cancer germline 3 37040295 GTTATACCTTCTCAACACCACCAAGCTTAGGTAAATCAGCTGAGTGTGTGAACAAGCAGAG 1057518223 360641 NM_001456.3(FLNA):c.4599-1G>A FLNA Mar 15, 2017 MedGen:CN517202 not provided germline X 154358356 TCTGACTGCTCACAACACCAATCCCTCACAGCCCCTTCAAGGTCAAGGTGCTGCCTACTCA -1 437688 NM_001145112.1(PATL2):c.1108G>A (p.Gly370Arg) PATL2 Oct 24, 2017 MedGen:CN562785,OMIM:617743 OOCYTE MATURATION DEFECT 4 germline 15 44669096 GGCTTCCTGCAGGTGCTCTCTGTGAGGAAGGGGAAGGCCCTGGTGGCCCGGCTGCTCCCCT 137852857 17698 NM_198428.2(BBS9):c.421G>A (p.Gly141Arg) BBS9 Dec 01, 2005 MedGen:C1859567,OMIM:615986 Bardet-Biedl syndrome 9 germline 7 33177570 CTTCAGAGAACAGCCTGCAATATGACCTATGGATCATTTGGTGGTGTAAAAGGTAATTTGC 80358274 34278 NM_004700.3(KCNQ4):c.778G>A (p.Glu260Lys) KCNQ4 Feb 17, 2011 MedGen:C2677637,OMIM:600101 DFNA 2 Nonsyndromic Hearing Loss not provided 1 40819416 ATCTTCGCCTCCTTCCTGGTCTACCTGGCTGAGAAGGACGCCAACTCCGACTTCTCCTCCT 786204014 185786 NM_005957.4(MTHFR):c.587G>A (p.Gly196Asp) MTHFR - MedGen:C1856058,OMIM:236250 Homocysteinemia due to MTHFR deficiency germline 1 11796399 GCCTCTCCTGACTGTCATCCCTATTGGCAGGTTACCCCAAAGGCCACCCCGAAGCAGGGAG 397509372 106954 NM_000090.3(COL3A1):c.1761+5G>A (p.Gly555_Asp587del) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188996501 GCTTCCCCGGTCCTAAAGGAAATGATGTGAGTTCCTTCATTAATTTCTTCAATAAATATTT 80359808 67523 NM_000059.3(BRCA2):c.9501G>A (p.Glu3167=) BRCA2 Nov 13, 1997 MedGen:C2675520,OMIM:612555 Breast-ovarian cancer, familial 2 not provided 13 32394933 GACATTCAACAAAATGAAAAATACTGTTGAGGTAAGGTTACTTTTCAGCATCACCACACAT 137853150 20502 NM_006019.3(TCIRG1):c.1213G>A (p.Gly405Arg) TCIRG1 Feb 01, 2003 MedGen:C1850127,OMIM:259700 Osteopetrosis autosomal recessive 1 germline 11 68047480 ACCTTCCCCTTCCTGTTTGCTGTGATGTTCGGGGATGTGGGCCACGGGCTGCTCATGTTCC 869025613 224882 NM_001203.2(BMPR1B):c.447-1G>A BMPR1B Mar 04, 2016 MedGen:C4225183,OMIM:616849 Brachydactyly, type a1, d germline 4 95124982 TCTAAAATTATCTTCATCTATCCATCTTTAGGTATAAAAGACAAGAAACCAGACCTCGATA 179363873 79107 NM_000211.4(ITGB2):c.715G>A (p.Ala239Thr) ITGB2 - MedGen:C0398738,OMIM:116920,Orphanet:ORPHA99842;MedGen:CN517202 Leukocyte adhesion deficiency type 1;not provided inherited 21 44901518 AACCTGGATGCACCCGAGGGTGGGCTGGACGCCATGATGCAGGTCGCCGCCTGCCCGGTGA 1057524142 371167 NM_024757.4(EHMT1):c.2622G>A (p.Trp874Ter) EHMT1 Dec 22, 2016 MedGen:CN517202 not provided germline 9 137800894 TCCTCTTCCCTGGCAGGATGACGGAGGCTGGACACCCATGATCTGGGCCACAGAGTACAAG 121964916 27163 NM_000204.4(CFI):c.728G>A (p.Gly243Asp) CFI Mar 01, 2007 MedGen:C0001733,OMIM:610984 Afibrinogenemia germline 4 109760567 AATACATTTCTCAGATGAAAGCCTGTGATGGTATCAATGATTGTGGAGACCAAAGTGATGA 58075662 29612 NM_000421.3(KRT10):c.467G>A (p.Arg156His) KRT10 Sep 20, 2017 Human Phenotype Ontology:HP:0007475,MedGen:C0079153,OMIM:113800,Orphanet:ORPHA312,SNOMED CT:254167000;MedGen:CN517202 Bullous ichthyosiform erythroderma;not provided germline 17 40822119 AAAAAGTAACCATGCAGAATCTGAATGACCGCCTGGCTTCCTACTTGGACAAAGTTCGGGC 797044846 266621 NM_000304.3(PMP22):c.117G>A (p.Trp39Ter) PMP22 Aug 13, 2015 MedGen:C0393814,OMIM:162500,Orphanet:ORPHA640,SNOMED CT:230558006 Hereditary liability to pressure palsies germline 17 15259155 CGTGGGCAATGGACACGCAACTGATCTCTGGCAGAACTGTAGCACCTCTTCCTCAGGAAAT 367699137 409111 NM_000359.2(TGM1):c.788G>A (p.Trp263Ter) TGM1 Jul 15, 2015 MedGen:CN517202 not provided germline 14 24260028 AGGACATTGTGTACGTGGACCATGAGGATTGGCGGCAGGAGTATGTTCTTAATGAGTCTGG 587784265 169332 NM_000430.3(PAFAH1B1):c.3G>A (p.Met1Ile) PAFAH1B1 Feb 08, 2013 MedGen:C1843916,OMIM:607432 Lissencephaly 1 germline 17 2638291 ATCAGATAAGCTTGACATTACAGCCAAGATGGTGCTGTCCCAGAGACAACGAGATGAACTG 863223296 26789 NM_001110556.1(FLNA):c.373+1G>A FLNA Dec 01, 1998 MedGen:C1848213,OMIM:300049,OMIM:300537,SNOMED CT:448227009 Periventricular nodular heterotopia 1 germline X 154370872 ACCGCGAGAGCATCAAACTGGTGTCCATCGGTGAGGGACGCCCCGAAGCGCCGGGCGGGCG 1057517846 360198 NM_016373.3(WWOX):c.131G>A (p.Trp44Ter) WWOX Jun 28, 2016 MedGen:CN517202 not provided germline 16 78108446 TTAACAGTCACACCGAGGAGAAGACTCAGTGGGAACATCCAAAAACTGGAAAAAGAAAACG 876661242 231905 NM_000059.3(BRCA2):c.9381G>A (p.Trp3127Ter) BRCA2 Feb 23, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline 13 32394813 TATGTTAATTGCTGCAAGCAACCTCCAGTGGCGACCAGAATCCAAATCAGGCCTTCTTACT -1 432450 NM_001270.2(CHD1):c.1853G>A (p.Arg618Gln) CHD1 Sep 21, 2017 MedGen:CN482172,OMIM:617682;MedGen:CN517202 PILAROWSKI-BJORNSSON SYNDROME;not provided de novo;germline 5 98893554 GGGCATTTATAGGTGTTGATGAAGCACACCGATTAAAGAATGATGACTCCCTTCTGTATAA 137853135 20787 NM_005094.3(SLC27A4):c.1748G>A (p.Arg583His) SLC27A4 Aug 01, 2009 MedGen:C1837610,OMIM:608649,Orphanet:ORPHA88621 Ichthyosis prematurity syndrome germline 9 128355770 TGCCCCTGTATGCGCGCCCCATCTTCCTGCGCCTCCTGCCTGAGCTGCACAAAACAGGTGT -1 442374 NM_033380.2(COL4A5):c.2509+1G>A COL4A5 Jun 06, 2017 MedGen:CN517202 not provided germline X 108615025 CAGGGATTCCTGGGCCAATAGGTCAACCTGGTAAGATTAGAGTAAATGTGCATTTTGTAGC 62514956 98659 NM_000277.2(PAH):c.912+1G>A PAH Mar 29, 2016 MedGen:C0031485,OMIM:261600,Orphanet:ORPHA716,SNOMED CT:154735006;MedGen:CN517202 Phenylketonuria;not provided germline 12 102851686 TCAGATCGCAGCTTTGCCCAGTTTTCCCAGGTAAGGAATGGATTTTTTAGCCTTCTAGTTA 879255596 227108 NM_001144967.2(NEDD4L):c.2690G>A (p.Arg897Gln) NEDD4L Nov 16, 2016 MedGen:C4310669,OMIM:617201;MedGen:CN236338 Periventricular nodular heterotopia 7;Periventricular nodular heterotopia with syndactyly, cleft palate and developmental delay de novo;germline 18 58390680 TGCTACTCATGGACGCCGAAAAGCGTATCCGGTTACTGCAGTTTGTCACAGGGACATCGCG 763799125 481376 NM_014297.4(ETHE1):c.586G>A (p.Asp196Asn) ETHE1 Nov 16, 2017 MedGen:C1865349,OMIM:602473,Orphanet:ORPHA51188 Ethylmalonic encephalopathy maternal 19 43508784 CCAGGAGACTGTCTGATCTACCCTGCTCACGATTACCATGGTGAGGGCTTCCTGGAAGAGG 121434563 31792 NM_000399.4(EGR2):c.1234G>A (p.Glu412Lys) EGR2 Nov 01, 2007 MedGen:C4016028 Dejerine-sottas neuropathy, autosomal dominant germline 10 62813404 TACTGTGGCCGAAAGTTTGCCCGGAGTGATGAGAGGAAGCGCCACACCAAGATCCACCTGA -1 434293 NM_000527.4(LDLR):c.1433G>A (p.Gly478Glu) LDLR - MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11113609 TCATCAGCAGAGACATCCAGGCCCCCGACGGGCTGGCTGTGGACTGGATCCACAGCAACAT 1800312 358515 NM_000152.4(GAA):c.2238G>A (p.Trp746Ter) GAA Jun 13, 2017 MedGen:C0017921,OMIM:232300,Orphanet:ORPHA365,SNOMED CT:124462004,SNOMED CT:237967002 Glycogen storage disease, type II germline;unknown 17 80117016 CACCTGGACTGTGGACCACCAGCTCCTGTGGGGGGAGGCCCTGCTCATCACCCCAGTGCTC 770302956 259645 NM_000228.2(LAMB3):c.1132+5G>A LAMB3 Jul 18, 2016 MedGen:CN517202 not provided germline 1 209629732 AGCTTCCATTCAGGAGACCTGCATCTGTGAGTAGAGGCTCCGGAGTCCCAGAGTGTCATTT 104893988 24335 NM_001024630.3(RUNX2):c.891G>A (p.Trp297Ter) RUNX2 May 30, 1997 MedGen:C0008928,OMIM:119600,Orphanet:ORPHA1452,SNOMED CT:65976001 Cleidocranial dysostosis germline 6 45512277 CCCCAGGCAGGCACAGTCTTCCCCGCCGTGGTCCTATGACCAGTCTTACCCCTCCTACCTG 377544304 358505 NM_000152.4(GAA):c.1799G>A (p.Arg600His) GAA Jul 10, 2017 MedGen:C0017921,OMIM:232300,Orphanet:ORPHA365,SNOMED CT:124462004,SNOMED CT:237967002;MedGen:CN517202 Glycogen storage disease, type II;not provided germline;unknown 17 80112622 CTCGGGGGACACGCCCATTTGTGATCTCCCGCTCGACCTTTGCTGGCCACGGCCGATACGC 118192120 76831 NM_000540.2(RYR1):c.4729G>A (p.Ala1577Thr) RYR1 May 11, 2010 MedGen:C0751951,OMIM:117000,Orphanet:ORPHA597,SNOMED CT:43152001;MedGen:CN517202 Central core disease;not provided unknown 19 38483311 TGCCCTCAGAACATCATGCCGTTGTCAGCCGCCATGTTCCAAAGCGAGCGCAAGAACCCGG 886039505 259913 NM_000118.3(ENG):c.360+1G>A ENG Jun 16, 2017 MedGen:C0039445,OMIM:187300,Orphanet:ORPHA774,SNOMED CT:21877004;MedGen:CN517202 Osler hemorrhagic telangiectasia syndrome;not provided germline 9 127829686 GCCCTGGGAATCCCACTGCACTTGGCCTACGTGAGTGTGTTCCCTCCAACCCCAGGCTGAG 397514454 38559 NM_006721.3(ADK):c.89G>A (p.Gly30Glu) ADK Oct 07, 2011 MedGen:C3280381,OMIM:614300,Orphanet:ORPHA289290 Hypermethioninemia due to adenosine kinase deficiency germline 10 74200787 TTTTTAGAGAAAATATTCTCTTTGGAATGGGAAATCCTCTGCTTGACATCTCTGCTGTAGT 267606918 21914 NM_004646.3(NPHS1):c.2464G>A (p.Val822Met) NPHS1 May 01, 2007 MedGen:C0403399,OMIM:256300,Orphanet:ORPHA839,SNOMED CT:197601003 Finnish congenital nephrotic syndrome germline 19 35842421 GGCGCTTACCAGTGCATTGTGGACAATGGGGTGGCGCCTCCAGCACGACGGCTGCTCCGTC 587777791 166219 NM_006218.3(PIK3CA):c.403G>A (p.Glu135Lys) PIK3CA Jan 10, 2013 MedGen:C3554518,OMIM:615108 Cowden syndrome 5 germline 3 179199740 GTGTGTGAATTTGATATGGTTAAAGATCCAGAAGTACAGGACTTCCGAAGAAATATTCTGA 1131692293 424537 NM_000280.4(PAX6):c.151G>A (p.Gly51Arg) PAX6 - MedGen:C0344542,OMIM:106210 Aniridia 1 de novo 11 31801767 CTGTCCACTTCCCCTATGCAGGTGTCCAACGGATGTGTGAGTAAAATTCTGGGCAGGTATT 1060503323 394685 NM_000038.5(APC):c.532-8G>A APC Nov 14, 2016 MedGen:CN240755;MedGen:C2713442,OMIM:175100;MedGen:C0027672,SNOMED CT:699346009 Familial adenomatous polyposis;Familial adenomatous polyposis 1;Hereditary cancer-predisposing syndrome germline 5 112780782 ACAAGATATTGATACTTTTTTATTATTTGTGGTTTTAGTTTTCCTTACAAACAGATATGAC 869025610 224871 NM_177987.2(TUBB8):c.785G>A (p.Arg262Gln) TUBB8 Jan 21, 2016 MedGen:C4225210,OMIM:616780 Oocyte maturation defect 2 germline 10 47607 AGCTGGCCGTGAACATGGTCCCGTTTCCCCGGCTGCATTTCTTCATGCCCGGCTTTGCCCC 267606844 32035 NM_000165.4(GJA1):c.227G>A (p.Arg76His) GJA1 Mar 01, 2004 MedGen:C2749477,OMIM:257850 Oculodentodigital dysplasia, autosomal recessive germline 6 121447074 ATGACAAGTCTTTCCCAATCTCTCATGTGCGCTTCTGGGTCCTGCAGATCATATTTGTGTC 587783015 166165 NM_201253.2(CRB1):c.998G>A (p.Gly333Asp) CRB1 Sep 18, 2014 MedGen:C3151202,OMIM:613835 Leber congenital amaurosis 8 unknown 1 197356840 CTCTGAATTTTCATCATGCAGGATACACAGGTGCCCAGTGTGAGATCGACCTCAATGAATG 587777161 106646 NM_001830.3(CLCN4):c.1630G>A (p.Gly544Arg) CLCN4 Aug 23, 2017 Gene:4412,MedGen:C3887959,OMIM:300114;MedGen:CN517202 Mental retardation 49, X-linked;not provided germline X 10213734 TCATTGGTGGTCATCATGTTTGAATTAACCGGGGGTCTGGAGTACATCGTGCCCCTGATGG 104894284 28182 NM_000448.2(RAG1):c.1682G>A (p.Arg561His) RAG1 May 29, 1998 MedGen:C1801959,OMIM:603554,Orphanet:ORPHA39041,SNOMED CT:307650006 Histiocytic medullary reticulosis germline 11 36574986 ACCCAGTGGACACCATTGCAAAGAGGTTCCGCTATGATTCAGCTTTGGTGTCTGCTTTGAT 28935472 26797 NM_001110556.1(FLNA):c.3562G>A (p.Ala1188Thr) FLNA Jan 04, 2018 MedGen:C0025237,OMIM:309350,Orphanet:ORPHA2484,SNOMED CT:13449007;MedGen:CN517202 Melnick-Needles syndrome;not provided germline X 154360233 GTGGGCCAATTCCAAGTGGACTGCTCGAGCGCGGGCAGCGCGGAGCTGACCATTGAGATCT 180177304 200621 NM_012203.1(GRHPR):c.102G>A (p.Trp34Ter) GRHPR Nov 27, 2014 MedGen:C0268165,OMIM:260000,Orphanet:ORPHA93599,SNOMED CT:40951006 Primary hyperoxaluria, type II germline 9 37424863 CTTTCCCCGCAGCTGTGAGGTGGAGCAGTGGGACTCGGATGAGCCCATCCCTGCCAAGGAG 1060500296 401837 NM_000267.3(NF1):c.6084+1G>A NF1 Nov 08, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003 Hereditary cancer-predisposing syndrome;Neurofibromatosis, type 1 germline 17 31336474 TCTGGAAATGTGAAATTGGTTTCAAGCAAGGTAATCACTTTTCTTTTGCCTTCTGTACTAT 974677376 439688 NM_020247.4(COQ8A):c.1506+1G>A COQ8A Aug 21, 2017 MedGen:C2677589,OMIM:612016,Orphanet:ORPHA139485 Coenzyme Q10 deficiency, primary, 4 maternal;paternal 1 226984656 AACTTCTTCTATGACCCCCAGCAGCACAAGGTGAGCCCCAGGGTGGGGGCACCCGCAGCCA 886039703 259922 NM_024757.4(EHMT1):c.2867+5G>A EHMT1 Aug 15, 2016 MedGen:CN517202 not provided germline 9 137811620 CGGGAGAACCGCTACGACTGTGTCGTGTGAGTGCAGTGCTTCCCCCAGCGCGGGCTGGCGC 1057518707 361243 NM_001356.4(DDX3X):c.1052G>A (p.Arg351Gln) DDX3X May 01, 2016 MedGen:C4085582,OMIM:300958,Orphanet:ORPHA457260 Mental retardation, X-linked 102 maternal X 41345206 ACAGATACTTGGTGTTAGATGAAGCTGATCGGATGTTGGATATGGGGTTTGAGCCTCAGAT 104894012 31179 NM_000162.3(GCK):c.1363G>A (p.Val455Met) GCK Jan 22, 1998 MedGen:C1865290,OMIM:602485,Orphanet:ORPHA79299 Hyperinsulinemic hypoglycemia familial 3 germline 7 44145171 AGTGGCCGGGGCGCGGCCCTGGTCTCGGCGGTGGCCTGTAAGAAGGCCTGTATGCTGGGCC 797045948 206783 NM_006642.4(SDCCAG8):c.567G>A (p.Trp189Ter) SDCCAG8 Jul 17, 2015 MedGen:C3150877,OMIM:613615 Senior-Loken syndrome 7 germline 1 243293111 TTTATTTTAGGGAAACATGCACAATTCTTGGATTACAACAGGTGAAGATTCTGGGGTGGGC 397516073 51961 NM_000256.3(MYBPC3):c.821+1G>A MYBPC3 Oct 30, 2017 MedGen:CN230736;Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Cardiovascular phenotype;Hypertrophic cardiomyopathy;Primary familial hypertrophic cardiomyopathy;not provided germline 11 47347856 CCTGGACCTCCTATCAGCCTTCCGCCGCACGTGAGTGGCCATCCTCAGGGCCTGGGGGAGG 397514747 75297 NM_001014796.2(DDR2):c.337G>A (p.Glu113Lys) DDR2 Jun 01, 2010 MedGen:C1849011,OMIM:271665,Orphanet:ORPHA93358 Spondylometaepiphyseal dysplasia short limb-hand type germline 1 162754775 CAGGGGCGCCATGCAGGAGGTCATGGCATCGAGTTTGCCCCCATGTACAAGATCAATTACA 879255278 244130 NM_001136239.3(PRDM6):c.1646G>A (p.Arg549Gln) PRDM6 Jul 20, 2016 MedGen:C4310753,OMIM:617039 Patent ductus arteriosus 3 germline 5 123180296 CCGGGGCCACCACCCTCAACAACCACATCCGAACCCACACTGGAGAAAAGCCCTTCAAGTA 80338828 29118 NM_002473.5(MYH9):c.2114G>A (p.Arg705His) MYH9 Apr 05, 2011 MedGen:C1863659,OMIM:603622;MedGen:CN073381,Orphanet:ORPHA182050 Deafness, autosomal dominant nonsyndromic sensorineural 17;MYH9 related disorders germline 22 36305975 ACGGTGTTCTCGAGGGCATCCGTATCTGCCGCCAGGGCTTCCCCAACAGGGTGGTCTTCCA 28942098 18306 NM_024529.4(CDC73):c.3G>A (p.Met1Ile) CDC73 Dec 01, 2002 MedGen:C1704981,OMIM:145001,Orphanet:ORPHA99880 Hyperparathyroidism 2 germline 1 193122203 CGAGCCGGCGGAGGCGAGGGGGGGGAAGATGGCGGACGTGCTTAGCGTCCTGCGACAGTAC 63750013 104110 NM_005910.5(MAPT):c.915+3G>A MAPT Mar 15, 2017 MedGen:CN517202 not provided germline 17 46010405 TATCAAACACGTCCCGGGAGGCGGCAGTGTGAGTACCTTCACACGTCCCATGCGCCGTGCT 727504350 193387 NM_000169.2(GLA):c.485G>A (p.Trp162Ter) GLA Dec 14, 2016 Human Phenotype Ontology:HP:0001071,MedGen:C0002986,OMIM:301500,Orphanet:ORPHA324,SNOMED CT:16652001 Fabry disease germline X 101401694 ACGACATTGATGCCCAGACCTTTGCTGACTGGGGAGTAGATCTGCTAAAATTTGATGGTTG 397515203 76209 NM_000548.4(TSC2):c.2640-1G>A TSC2 Jun 13, 2016 MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000;MedGen:CN517202 Tuberous sclerosis syndrome;not provided germline 16 2076067 GGATGGAGTGCCAGCCCCCTTCTCATCTCAGGTTTAATCAGTACATCGTGTGTCTGGCCCA 1131692062 424206 NC_012920.1:m.12283G>A MT-TL2 May 22, 2017 MedGen:C0751651,Orphanet:ORPHA68380 Mitochondrial diseases germline MT 12283 CATGGCTTTCTCAACTTTTAAAGGATAACAGCTATCCATTGGTCTTAGGCCCCAAAAATTT 794726716 187792 NM_001165963.1(SCN1A):c.2876G>A (p.Cys959Tyr) SCN1A Jun 16, 2016 MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002;MedGen:CN517202 Severe myoclonic epilepsy in infancy;not provided de novo;germline 2 166037846 GTGGGGAGTGGATAGAGACCATGTGGGACTGTATGGAGGTTGCTGGTCAAGCCATGTGCCT 312262708 171262 NM_000100.3(CSTB):c.149G>A (p.Gly50Glu) CSTB Nov 25, 2014 MedGen:C0751785,OMIM:254800,Orphanet:ORPHA308,SNOMED CT:230423006 Unverricht-Lundborg syndrome germline 21 43774677 CCGTGTCATTCAAGAGCCAGGTGGTCGCGGGGACAAACTACTTCATCAAGGTAGAGTGTGG 727503863 177590 NM_017780.3(CHD7):c.2933G>A (p.Trp978Ter) CHD7 Apr 15, 2014 MedGen:C0265354,OMIM:214800,Orphanet:ORPHA138,SNOMED CT:47535005 CHARGE association germline 8 60822121 TCAGGGAATACCAGTTGGAGGGAGTAAACTGGCTACTTTTCAATTGGTACAACATGTATGT 141659620 21858 NM_003119.3(SPG7):c.1045G>A (p.Gly349Ser) SPG7 Oct 18, 2017 MedGen:CN239433;MedGen:C1846564,OMIM:607259,Orphanet:ORPHA99013;MedGen:CN517202 Spastic Paraplegia, Recessive;Spastic paraplegia 7;not provided germline 16 89531961 GCCAAGGTCCCAAAGGGCGCACTGCTGCTCGGCCCCCCCGGCTGTGGGAAGACGCTGCTGG 104893622 22773 NM_000104.3(CYP1B1):c.1120G>A (p.Asp374Asn) CYP1B1 Feb 01, 1998 Human Phenotype Ontology:HP:0000557,MedGen:C0020302,OMIM:231300,Orphanet:ORPHA98976 Buphthalmos germline 2 38071234 GTGGGGAGGGACCGTCTGCCTTGTATGGGTGACCAGCCCAACCTGCCCTATGTCCTGGCCT 886041359 265148 NM_000444.5(PHEX):c.1367G>A (p.Trp456Ter) PHEX May 12, 2016 MedGen:C0733682,OMIM:307800,Orphanet:ORPHA89936,SNOMED CT:82236004;MedGen:CN517202 Familial X-linked hypophosphatemic vitamin D refractory rickets;not provided germline X 22133587 TTATTGACATGCTAGAGAAAGAAAATGAGTGGATGGATGCAGGAACGAAAAGGAAAGCCAA 1064793980 409261 NM_000138.4(FBN1):c.6616+1G>A FBN1 Apr 07, 2016 MedGen:CN517202 not provided germline 15 48434593 TTGAGCCCGGTCCAATGATGACATGTGAAGGTACATCTCTTAAACAGAGAACAGTTGATTA 137852956 19667 NM_021830.4(TWNK):c.908G>A (p.Arg303Gln) TWNK May 01, 2009 MedGen:C1836439,OMIM:609286 Autosomal dominant progressive external ophthalmoplegia with mitochondrial DNA deletions 3 germline 10 100989118 CCTTACTCCCTTACCTGGAACAGTTCCGGCGGATTGTATTCTGGTTGGGGGATGACCTTCG 111033648 44187 NM_000155.3(GALT):c.152G>A (p.Arg51Gln) GALT Dec 04, 2012 MedGen:C0268151,OMIM:230400,Orphanet:ORPHA79239,SNOMED CT:124354006 Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase not provided 9 34647158 GGGTGCTGGTGTCAGCTCACCGCATGAAGCGGCCCTGGCAGGGTCAAGTGGAGCCCCAGCT 2309689 33868 NM_000018.3(ACADVL):c.1322G>A (p.Gly441Asp) ACADVL Jun 16, 2017 MedGen:C3887523,OMIM:201475,Orphanet:ORPHA26793,SNOMED CT:237996001,SNOMED CT:237997005;MedGen:CN517202;MedGen:CN169374 Very long chain acyl-CoA dehydrogenase deficiency;not provided;not specified germline;unknown 17 7223865 ATGAATGCATCCAAATCATGGGGGGTATGGGCTTCATGAAGGTACAGGACGGTCTTCTGCA 63750992 426825 NM_001171.5(ABCC6):c.3932G>A (p.Gly1311Glu) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16154982 CCGGGGCAGGGAAGTCCTCCCTGGCCAGTGGGCTGCTGCGGCTCCAGGAGGCAGCTGAGGG 137853599 25832 NM_152692.4(C1GALT1C1):c.454G>A (p.Glu152Lys) C1GALT1C1 Oct 27, 2005 MedGen:C0272137,OMIM:300622,SNOMED CT:40387008 Polyagglutinable erythrocyte syndrome somatic X 120626713 CTTGCACGCCCCACTACGTTTGCTATCATTGAAAACCTAAAGTATTTTTTGTTAAAAAAGG 121912509 29470 NM_000238.3(KCNH2):c.3003G>A (p.Trp1001Ter) KCNH2 Apr 20, 2017 MedGen:C3150943,OMIM:613688;MedGen:CN517202 Long QT syndrome 2;not provided germline 7 150947477 CTCAGGAGTGTCCAACATTTTCAGCTTCTGGGGGGACAGTCGGGGCCGCCAGTACCAGGAG 104895317 26969 NM_000431.3(MVK):c.1000G>A (p.Ala334Thr) MVK Apr 26, 2017 MedGen:C0398691,OMIM:260920,Orphanet:ORPHA343,SNOMED CT:234538002;MedGen:C1959626,OMIM:610377,Orphanet:ORPHA29 Hyperimmunoglobulin D with periodic fever;Mevalonic aciduria not provided 12 109595142 GCCCGCGGACTTCACAGCAAGCTGACTGGCGCAGGCGGTGGTGGCTGTGGCATCACACTCC 144781064 68459 NM_000492.3(CFTR):c.3717G>A (p.Arg1239=) CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline 7 117627770 CATTTCCTTCTCAATAAGTCCTGGCCAGAGGGTGAGATTTGAACACTGCTTGCTTTGTTAG 1057518792 361011 NM_001042492.2(NF1):c.2410-1G>A NF1 Mar 10, 2017 Human Phenotype Ontology:HP:0007565,MedGen:C1861975,OMIM:114030,Orphanet:ORPHA2678;MedGen:C0027672,SNOMED CT:699346009 Cafe au lait spots, multiple;Hereditary cancer-predisposing syndrome germline;unknown 17 31229024 TTCATGCTTTGCACAAAAATTTTGTGTTTAGGCTGCTGAAAGCCTTCACAAGACCATTGTT 587784131 168204 NM_022455.4(NSD1):c.4966+1G>A NSD1 Feb 08, 2013 MedGen:CN035106,OMIM:117550 Sotos syndrome 1 germline 5 177257152 CTAATCCAGCCAATGTTTCTGCATCTAAAGGTATGGATTTCTTATGTGGACCAGTCTAATT 72656330 32352 NM_000088.3(COL1A1):c.3541G>A (p.Gly1181Ser) COL1A1 Jan 11, 1996 MedGen:C0268360,OMIM:166210,SNOMED CT:86470003 Osteogenesis imperfecta, recessive perinatal lethal germline 17 50186913 CTCTCTTCCCTCTCTGTGCAGGGTCCCCCCGGCCCTCCTGGACCTCCTGGTCCCCCTGGTC 375596425 441058 NM_000083.2(CLCN1):c.1471+1G>A CLCN1 Jul 01, 2016 MedGen:CN517202 not provided germline 7 143339323 GCGGAGGCTTCATGCCTGTGTTTGTGCTAGGTAAGTTCTGATGGGAAGCCTGGGGTCTGAC 140880838 260219 NM_001972.3(ELANE):c.628G>A (p.Gly210Arg) ELANE Apr 08, 2014 MedGen:CN517202 not provided germline 19 855988 GGGGACTCCGGCAGCCCCTTGGTCTGCAACGGGCTAATCCACGGAATTGCCTCCTTCGTCC 119468009 18685 NM_020247.4(COQ8A):c.1645G>A (p.Gly549Ser) COQ8A Jun 07, 2016 MedGen:C2677589,OMIM:612016,Orphanet:ORPHA139485 Coenzyme Q10 deficiency, primary, 4 germline 1 226985326 GCGAAATCCATAGAGATGAAGTTCCTCACCGGCTACGAGGTCAAGGTGAGCAGGGTTGCGG 587779557 107008 NM_000090.3(COL3A1):c.637G>A (p.Gly213Ser) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188989396 TCTATTCATTTTTTATTTCCTTATTTTCAGGGCCCTCCAGGACCTCCTGGTGCTATAGGTC 771894262 227165 NM_017909.3(RMND1):c.631G>A (p.Val211Met) RMND1 Dec 22, 2015 MedGen:C0751651,Orphanet:ORPHA68380 Mitochondrial diseases germline 6 151433213 TTTTAAATCACAGATGCAGCAAATATTTTGGTGATGGGTGTGGAAAATTCTGCAAAAGAAG 766328537 186962 NM_000049.2(ASPA):c.79G>A (p.Gly27Arg) ASPA Apr 07, 2017 MedGen:C0206307,OMIM:271900,Orphanet:ORPHA141,SNOMED CT:80544005;MedGen:CN517202 Spongy degeneration of central nervous system;not provided germline;unknown 17 3476238 TTTGGAGGAACCCATGGGAATGAGCTAACCGGAGTATTTCTGGTTAAGCATTGGCTAGAGA 104886131 35789 NM_000495.4(COL4A5):c.1780G>A (p.Gly594Ser) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108598702 TGTTTCTGTATTAAACTTTTCCCTTTTTAGGGTGGAATTACTTTTAAGGGTGAAAGAGGTC 863224923 213539 NM_014946.3(SPAST):c.1685G>A (p.Arg562Gln) SPAST Jun 24, 2014 MedGen:C1866855,OMIM:182601,Orphanet:ORPHA100985 Spastic paraplegia 4, autosomal dominant unknown 2 32145005 TGGCAAAAGATGCAGCACTGGGTCCTATCCGAGGTAGGTATACAAGAGCTTAAAACATTTA 863225165 214218 NM_023073.3(CPLANE1):c.2831G>A (p.Arg944His) CPLANE1 Feb 23, 2015 MedGen:C3553264,OMIM:614615 Joubert syndrome 17 unknown 5 37213648 CAGCAGTGAGAGTCGTCCAGTCCATGGCTCGTTTCATGGCTGCCTATTTCACCAATCAGCA 886041225 264998 NM_000444.5(PHEX):c.1645+1G>A PHEX Jun 12, 2017 MedGen:C0733682,OMIM:307800,Orphanet:ORPHA89936,SNOMED CT:82236004;MedGen:CN517202 Familial X-linked hypophosphatemic vitamin D refractory rickets;not provided germline;maternal X 22190503 CCTTCTACAGTGCATCCACCAACCAGATCCGTGAGTACGGGTTCCTTGTCTCCTTGGTAAC 149914792 266410 NM_000070.2(CAPN3):c.1303G>A (p.Glu435Lys) CAPN3 Oct 27, 2016 MedGen:C1869123,OMIM:253600,Orphanet:ORPHA267;MedGen:CN517202 Limb-girdle muscular dystrophy, type 2A;not provided germline 15 42399601 AAGCTTCAGACCTGGACAGTGTCTGTGAACGAGGGCCGCTGGGTACGGGGTTGCTCTGCCG 690016564 171838 NM_005211.3(CSF1R):c.2350G>A (p.Val784Met) CSF1R Dec 18, 2014 Gene:8156,MedGen:C1857300,OMIM:221820 Hereditary diffuse leukoencephalopathy with spheroids germline 5 150056311 TGCATCCACCGGGACGTGGCAGCGCGTAACGTGCTGTTGACCAATGGTCATGTGGCCAAGA 886041057 263634 NM_181789.2(GLDN):c.541+1G>A GLDN Nov 09, 2016 MedGen:C4310670,OMIM:617194 Lethal congenital contracture syndrome 11 germline 15 51383893 AAGGAGCAAATGGAAAAAGAGGAAAAATGGGTATTTTTGGCAACTCTTCTAATTAATTTCC 267607734 95616 NM_000249.3(MLH1):c.306+1G>A MLH1 Jul 27, 2017 MedGen:C0009405,Orphanet:ORPHA443090;MedGen:C2936783,OMIM:120435 Hereditary nonpolyposis colon cancer;Lynch syndrome I germline 3 37001054 AGTATTTCTACCTATGGCTTTCGAGGTGAGGTAAGCTAAAGATTCAAGAAATGTGTAAAAT 587779521 106966 NM_000090.3(COL3A1):c.3517G>A (p.Gly1173Arg) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189008134 CCAGGGCCTCGAGGTAACAGAGGTGAAAGAGGATCTGAGGTAAGACATCACTTATACGTAT 886039761 260386 NM_024818.4(UBA5):c.503G>A (p.Gly168Glu) UBA5 Oct 06, 2016 MedGen:C4310700,OMIM:617132 Epileptic encephalopathy, early infantile, 44 germline 3 132670973 CAAACTTATTTTCTTTGACTAGTAATGGTGGGTTAGAAGAAGGAAAACCTGTTGATCTAGT 587779599 107059 NM_000090.3(COL3A1):c.2699G>A (p.Gly900Asp) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189004019 CAGGACCCCCAGGTCCCAGCGGTTCTCCAGGCAAGGATGGGCCCCCAGGTCCTGCGGGTAA 137854500 24542 NM_005502.3(ABCA1):c.3865G>A (p.Asp1289Asn) ABCA1 Jul 27, 2001 MedGen:C0039292,OMIM:205400,Orphanet:ORPHA31150 Tangier disease germline 9 104814154 CAGAGCTGTCTTCGCCCGTTCACTGAAGATGATGCTGCTGATCCAAATGATTCTGACATAG 397518423 94255 NM_005026.4(PIK3CD):c.3061G>A (p.Glu1021Lys) PIK3CD Aug 07, 2017 MedGen:C3714976,OMIM:615513,Orphanet:ORPHA397596;MedGen:CN517202;MedGen:CN169374 Immunodeficiency 14;not provided;not specified de novo;germline;inherited 1 9726972 GCACTGAAGCACTTCCGAGTGAAGTTTAACGAAGCCCTCCGTGAGAGCTGGAAAACCAAAG 864321623 217214 NM_032504.1(UNC80):c.565G>A (p.Val189Met) UNC80 Jan 07, 2016 Human Phenotype Ontology:HP:0001298,MedGen:C1963101;MedGen:C4225203,OMIM:616801 Encephalopathy;Hypotonia, infantile, with psychomotor retardation and characteristic facies 2 germline 2 209777524 CAGAACTCCATGGCTACTGTGGAGCTCTTCGTGTTTCTGTTTGCTCCCCTGGTACACAGGA 121912868 32398 NM_001844.4(COL2A1):c.3158G>A (p.Gly1053Glu) COL2A1 Nov 05, 1992 MedGen:C0542428,Orphanet:ORPHA93297 Hypochondrogenesis germline 12 47977607 ATGGCCCCCCTGGCAGAGATGGCGCTGCTGGAGTCAAGGTGAGTGTCTGGTGTCTGTGTGT 397507941 67095 NM_000059.3(BRCA2):c.7856G>A (p.Trp2619Ter) BRCA2 Sep 08, 2016 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome germline 13 32362573 GTGTGGATCCAAAGCTTATTTCTAGAATTTGGGTTTATAATCACTATAGATGGATCATATG 201095702 38850 NM_004959.4(NR5A1):c.634G>A (p.Gly212Ser) NR5A1 Oct 08, 2010 MedGen:C3151406,OMIM:613957 Spermatogenic failure 8 germline 9 124500326 GCCAGCCCCCCACAGCCTGGGCTGCCGTACGGCTACCCAGAGCCCTTCTCTGGAGGGCCCA 879254771 245947 NM_000527.4(LDLR):c.1060+1G>A LDLR Mar 25, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11110772 TCCAGCTGGTGGCCCAGCGAAGATGCGAAGGTGATTCCCGGGTGGGACTGAGCCCTGGGCC 72664214 426832 NM_001171.5(ABCC6):c.3883-6G>A ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16155037 TGGTCAGAGCAGGCCTTTCCTCCCAACCCCGGGCAGGTGGGCATCGTTGGCAGGACCGGGG 1060503494 393485 NM_022912.2(REEP1):c.113G>A (p.Trp38Ter) REEP1 May 20, 2016 MedGen:C1853247,OMIM:610250,Orphanet:ORPHA101011 Spastic paraplegia 31, autosomal dominant germline 2 86264034 TGTGTTGCTTTCTGTTTCAACAGGTCAAATGGATGATGTACTGGATTATATTTGCACTTTT 869320767 227451 NM_005045.3(RELN):c.5969+1G>A RELN Dec 21, 2015 MedGen:C0796089,OMIM:257320,Orphanet:ORPHA89844 Lissencephaly 2 germline 7 103553659 TTATTGTCCATATTCTTCAAAGGGGGCACCGTAAGTATTAAGAATCTAAAAATAAAACCAC 61752159 104850 NM_000330.3(RS1):c.422G>A (p.Arg141His) RS1 Nov 04, 2016 MedGen:C0271091,OMIM:312700,Orphanet:ORPHA792,SNOMED CT:86923008;MedGen:CN517202 Juvenile retinoschisis;not provided germline;unknown X 18644530 AAGTGATTTCAGGGATCCTCACCCAGGGGCGCTGTGACATCGATGAGTGGATGACCAAGTA 750950408 214274 NM_153704.5(TMEM67):c.515G>A (p.Arg172Gln) TMEM67 Feb 23, 2015 MedGen:C1853153,OMIM:610688 Joubert syndrome 6 unknown 8 93765414 TTATTTTTGTTATATTGAACAGGTGCGTCCGATGTGAGCCAACATTTGTTAATACCAGCAG 587780326 134329 NM_018294.5(CWF19L1):c.964+1G>A CWF19L1 Dec 09, 2014 MedGen:C4015301,OMIM:616127,Orphanet:ORPHA453521;MedGen:CN517202 Spinocerebellar ataxia, autosomal recessive 17;not provided germline 10 100245798 CTCCTCATCCAAAGCAGCCTCGCAAACCTCGTAAGTACCTTTATTCCAGAGGTTTCTTCTA 61754375 18835 NM_000372.4(TYR):c.896G>A (p.Arg299His) TYR Jan 17, 2017 MedGen:C0268494,OMIM:203100,Orphanet:ORPHA79431,SNOMED CT:6483008;MedGen:CN517202 Tyrosinase-negative oculocutaneous albinism;not provided germline 11 89191278 GCAATGGAACGCCCGAGGGACCTTTACGGCGTAATCCTGGAAACCATGACAAATCCAGAAC 397515563 76612 NM_012144.3(DNAI1):c.2001+1G>A (p.Ala607_Lys667del) DNAI1 Sep 03, 2015 MedGen:C0022521,OMIM:244400,Orphanet:ORPHA98861,SNOMED CT:42402006 Kartagener syndrome germline 9 34517468 CTCTCACCCAATTTGCGCAAGATGCCAAAGGTACAGGCTCTGGGACTTTGAGCTGCTGCAA 137852909 17936 NM_000419.4(ITGA2B):c.1253G>A (p.Gly418Asp) ITGA2B Feb 11, 1994 MedGen:C0040015,OMIM:273800,Orphanet:ORPHA849,SNOMED CT:32942005 Glanzmann thrombasthenia germline 17 44381019 CTGCCCCCTACGGGGGTCCCAGTGGCCGGGGCCAAGTGCTGGTGTTCCTGGGTCAGAGTGA 113994173 49461 NM_001079.3(ZAP70):c.837+121G>A ZAP70 Mar 01, 2012 MedGen:C1849236,OMIM:269840 Severe combined immunodeficiency, atypical not provided 2 97733464 AGCGGAAGAAGCTCTCTCTCCACTGTCTCTGGGAGTCCTCAGTGGATATAGGTCTCATGAG 199473058 78703 NM_198056.2(SCN5A):c.362G>A (p.Arg121Gln) SCN5A Jul 22, 2016 MedGen:C1142166,Orphanet:ORPHA130,SNOMED CT:418818005 Brugada syndrome germline 3 38630341 TGTATGTCCTCAGTCCCTTCCACCCCATCCGGAGAGCGGCTGTGAAGATTCTGGTTCACTC -1 434138 NM_174936.3(PCSK9):c.207+5G>A PCSK9 - Human Phenotype Ontology:HP:0003146,MedGen:C0151718 Hypocholesterolemia germline 1 55040049 CAGCCACCTTCCACCGCTGCGCCAAGGTGCGGGTGTAGGGATGGGAGGCCGGGGCGAACCC -1 426528 NM_002052.4(GATA4):c.998-26G>A GATA4 Jan 07, 2017 MedGen:C0152021,SNOMED CT:13213009 Congenital heart disease unknown 8 11756909 GGCTGTTCGTTTGTCCCTGCCGCTGATTTGGGTGTGCTGACTCTGCTTCATTCCAGCTCCT 1057516539 357043 NM_000228.2(LAMB3):c.628+1G>A LAMB3 Aug 07, 2017 MedGen:C0079683,OMIM:226700,Orphanet:ORPHA79404,SNOMED CT:400140006;MedGen:CN517202 Junctional epidermolysis bullosa gravis of Herlitz;not provided germline;unknown 1 209633069 TTCCAGCAACTCAAAGTCAAAAAATTCAAGGTCAGTGTGGTTACTTCTCTTGTCCATGGAA 281874739 35612 NM_000495.4(COL4A5):c.438+5G>A COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108571471 GTTTTCCTGGTTTACAGGGTCCTCCAGTAAGTTATAAAATTTGGGATTATGATGAACACAG 121918468 28381 NM_002834.4(PTPN11):c.1381G>A (p.Ala461Thr) PTPN11 Jul 11, 2017 MedGen:CN074218,OMIM:151100;MedGen:C1860991,OMIM:609942;MedGen:C0175704,Orphanet:ORPHA500;MedGen:CN166718,Orphanet:ORPHA98733;MedGen:CN517202 LEOPARD syndrome 1;Noonan syndrome 3;Noonan syndrome with multiple lentigines;Rasopathy;not provided germline 12 112488444 GTCCCTGCTTTTTGTCCTTCTGCCCGCAGTGCTGGAATTGGCCGGACAGGGACGTTCATTG 878855326 243898 NM_007075.3(WDR45):c.614G>A (p.Gly205Asp) WDR45 Jun 09, 2016 MedGen:C3550973,OMIM:300894,Orphanet:ORPHA329284 Neurodegeneration with brain iron accumulation 5 de novo X 49075659 ACATAGCCTGTGTGTCTCTAAACCAGCCAGGCACTGTAGTGGCCTCAGCCTCCCAGAAGGG 121908084 19084 NM_000547.5(TPO):c.1768G>A (p.Gly590Ser) TPO Jan 01, 1995 MedGen:C1291299,OMIM:274500,SNOMED CT:124204003 Deficiency of iodide peroxidase germline 2 1487991 CTGCAGAGGGGCCGGGACCACGGGCTGCCAGGTCTGCCAGTTCCTTCCCTTGCACACCTCA 1057520599 367268 NM_000094.3(COL7A1):c.6109G>A (p.Gly2037Arg) COL7A1 Mar 23, 2016 MedGen:CN517202 not provided germline 3 48575410 CCCGGGCCTTCCGGCCTTGCCGGGGAGCCTGGAAAGCCTGGTATTCCCGGGCTCCCAGGCA 61750571 105256 NM_000350.2(ABCA4):c.5316G>A (p.Trp1772Ter) ABCA4 Feb 12, 2016 MedGen:CN517202 not provided germline 1 94014687 CACTCTGAGTTGTCTCATTTCACACAGATGGGCGGTCATTCCCATGATGTACCCAGCATCC 121909233 22876 NM_000314.6(PTEN):c.55G>A (p.Asp19Asn) PTEN Sep 01, 2000 Human Phenotype Ontology:HP:0002861,MeSH:D008545,MedGen:C0025202,SNOMED CT:2092003 Malignant melanoma somatic 10 87864524 GTTAGCAGAAACAAAAGGAGATATCAAGAGGATGGATTCGACTTAGACTTGACCTGTATCC 1060502226 392807 NM_014946.3(SPAST):c.1173+1G>A SPAST May 24, 2017 MedGen:C1866855,OMIM:182601,Orphanet:ORPHA100985;MedGen:CN517202 Spastic paraplegia 4, autosomal dominant;not provided germline 2 32127023 GGTCCACCTGGGAATGGGAAGACAATGCTGGTAAGGGTTCTCTTCAAATTTGAGTTTTCTG 1131692057 424223 NM_006194.3(PAX9):c.3G>A (p.Met1Ile) PAX9 Jun 24, 2017 MedGen:C1970291,OMIM:604625 Tooth agenesis, selective, 3 germline 14 36662092 GGGCCGGGTTGGTGTACTGCTCGGAGCAATGGGTGAGTGGCGGCGGGGGACTCTGTCAGAG 121908909 21394 NM_002977.3(SCN9A):c.2691G>A (p.Trp897Ter) SCN9A Dec 14, 2006 MedGen:C1855739,OMIM:243000,Orphanet:ORPHA88642 Indifference to pain, congenital, autosomal recessive germline 2 166277133 GATCAATGATGACTGTACGCTCCCACGGTGGCACATGAACGACTTCTTCCACTCCTTCCTG 137852990 20009 NM_022437.2(ABCG8):c.788G>A (p.Arg263Gln) ABCG8 Dec 01, 2000 MedGen:C0342907,OMIM:210250,Orphanet:ORPHA2882,SNOMED CT:238104009 Sitosterolemia germline 2 43852692 AGACCTTGTCCAGGCTGGCCAAAGGCAACCGGCTGGTGCTCATCTCCCTCCACCAGCCTCG 756690487 208129 NM_000153.3(GALC):c.331G>A (p.Gly111Ser) GALC May 27, 2015 MedGen:C0023521,OMIM:245200,Orphanet:ORPHA487,SNOMED CT:192782005 Galactosylceramide beta-galactosidase deficiency germline 14 87986600 ACTTCCGTTTTTGCTCTCCTCTATTCAGACGGCACTGAGCCCTCCCACATGCATTATGCAC 794726749 443035 NM_001165963.2(SCN1A):c.1662+1G>A SCN1A Aug 24, 2016 MedGen:CN517202 not provided germline 2 166045042 TATGAAAAGAGGTACTCCTCCCCACACCAGGTATGGCACTGCTGAGTTTACTGATGCATGG -1 433501 NM_004006.2(DMD):c.8880G>A (p.Trp2960Ter) DMD Apr 25, 2017 MedGen:CN169374 not specified germline X 31478163 GCGCCAAGCTGAGGTGATCAAGGGATCCTGGCAGCCCGTGGGCGATCTCCTCATTGACTCT 111033614 25305 NM_000132.3(F8):c.5123G>A (p.Arg1708His) F8 Mar 01, 1993 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154928667 TTTATGATGAGGATGAAAATCAGAGCCCCCGCAGCTTTCAAAAGAAAACACGACACTATTT 867262025 363355 NM_006218.3(PIK3CA):c.2176G>A (p.Glu726Lys) PIK3CA Jan 30, 2017 Human Phenotype Ontology:HP:0030078,MeSH:C538231,MedGen:C0152013;Human Phenotype Ontology:HP:0010796,MedGen:C0677865;MeSH:D015179,MedGen:CN236642;Human Phenotype Ontology:HP:0100013,MeSH:D001943,MedGen:C1458155,Orphanet:ORPHA180250,SNOMED CT:126926005;Human Phenotype Ontology:HP:0030359,MedGen:C0149782;MeSH:C535575,MedGen:C1168401,OMIM:275355,Orphanet:ORPHA67037;Human Phenotype Ontology:HP:0006740,MedGen:C0279680;MeSH:D002583,MedGen:CN236667;MedGen:CN517202 Adenocarcinoma of lung;Brainstem glioma;Colorectal Neoplasms;Neoplasm of the breast;Squamous cell carcinoma of lung;Squamous cell carcinoma of the head and neck;Transitional cell carcinoma of the bladder;Uterine cervical neoplasms;not provided germline;somatic 3 179221146 ACTGACATTCTCAAACAGGAGAAGAAGGATGAAACACAAAAGGTGTGTGACTCTAGTTTGT 763393580 441759 NM_002693.2(POLG):c.2665G>A (p.Ala889Thr) POLG Oct 05, 2016 MedGen:CN517202 not provided germline 15 89321194 CAGGCCCCACCTGGCTACACCCTTGTGGGTGCTGATGTGGACTCCCAAGAGCTGTGGATTG 864309725 216026 NM_172250.2(MMAA):c.161G>A (p.Trp54Ter) MMAA Jan 07, 2016 MedGen:C1855109,OMIM:251100,Orphanet:ORPHA79310 Methylmalonic aciduria cblA type germline 4 145639300 TTAATTCTCTTGGACTCCATTGTACAAAGTGGATGCTGCTGTCAGATGGCTTAAAGAGAAA 121909678 31239 NM_000821.6(GGCX):c.1672G>A (p.Gly558Arg) GGCX Mar 01, 2007 MedGen:C1835813,OMIM:610842,Orphanet:ORPHA91135 Pseudoxanthoma elasticum-like disorder with multiple coagulation factor deficiency germline 2 85551548 CTGGGCAACACTAGCATCCAGCTGCTGCAGGGGGAAGTGACTGTGGAGCTTGTGGCAGAAC 369398935 171800 NM_002887.3(RARS):c.1535G>A (p.Arg512Gln) RARS Apr 29, 2014 MedGen:C4015323,OMIM:616140,Orphanet:ORPHA438114 Leukodystrophy, hypomyelinating, 9 germline 5 168516860 GCATCAAATATGCTGACCTTTCCCATAACCGGTTGAATGACTACATCTTCTCCTTTGACAA 368454909 98531 NM_000203.4(IDUA):c.1045G>A (p.Asp349Asn) IDUA Nov 30, 2012 Human Phenotype Ontology:HP:0000943,MedGen:C0086795,OMIM:607014,Orphanet:ORPHA93473 Hurler syndrome germline 4 1002341 TCCGCCTTCCCCTACGCGCTCCTGAGCAACGACAATGCCTTCCTGAGCTACCACCCGCACC 370706991 468962 NM_017950.3(CCDC40):c.2712-1G>A CCDC40 May 24, 2017 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244 Ciliary dyskinesia germline 17 80089763 ATTTCTTACACTGCCTCTCCTACCTCTAAAGACACCAGATTATGCTTTGGGAGAAAAAAAT 1060505037 404674 NM_001690.3(ATP6V1A):c.215G>A (p.Gly72Asp) ATP6V1A Mar 27, 2017 MedGen:CN241828,OMIM:617403 CUTIS LAXA, AUTOSOMAL RECESSIVE, TYPE IID germline 3 113784227 TAGGTTTTCCTTAGCTGCTGTTTTTAGCTGGTGTGTCTGTTGGAGATCCTGTACTTCGCAC 193922922 39291 NM_007317.2(KIF22):c.446G>A (p.Arg149Gln) KIF22 Feb 10, 2017 MedGen:C1863732,OMIM:603546,Orphanet:ORPHA93360;MedGen:CN517202 Spondyloepimetaphyseal dysplasia with multiple dislocations;not provided germline 16 29798644 GCAGCCCAGAGCAACCTGGGGTGATCCCGCGGGCTCTCATGGACCTCCTGCAGCTCACAAG 606231154 20243 NM_021102.3(SPINT2):c.593-1G>A SPINT2 Feb 01, 2009 MedGen:C2678346 Diarrhea 3, secretory sodium, congenital, syndromic germline 19 38291839 GCCCGTCCTGAGGCCCCTCTCTCGTCCTCAGTGGTGGTTCTGGCGGGGCTGTTCGTGATGG 794727444 193200 NM_021007.2(SCN2A):c.5645G>A (p.Arg1882Gln) SCN2A Mar 15, 2017 MedGen:C1843140,OMIM:607745,Orphanet:ORPHA140927;MedGen:C3150987,OMIM:613721;Human Phenotype Ontology:HP:0200134,MedGen:C0543888;MedGen:CN517202 Benign familial neonatal-infantile seizures;Early infantile epileptic encephalopathy 11;Epileptic encephalopathy;not provided de novo;germline 2 165389451 TGGATGCCCTTCGAATACAGATGGAAGAGCGATTCATGGCATCAAACCCCTCCAAAGTCTC 398122876 45621 NM_002501.3(NFIX):c.955+1G>A NFIX Aug 13, 2010 MedGen:C0265211,OMIM:602535,SNOMED CT:73284007 Marshall-Smith syndrome germline 19 13075672 CCAGCGGGTGGCCCAACGATGTGGATGCAGGTATGGGTGCGGGGGATCCTGACCCAGAGCA 140307681 443310 NM_080916.2(DGUOK):c.195G>A (p.Trp65Ter) DGUOK Sep 13, 2017 MedGen:CN517202 not provided germline 2 73938962 GAAGTTACTCACGAAAACTTACCCAGAATGGCACGTAGCTACAGAACCTGTAGCAACATGG -1 469861 NM_001127221.1(CACNA1A):c.1704G>A (p.Trp568Ter) CACNA1A Jun 03, 2017 MedGen:C4310716,OMIM:617106;MedGen:C1720416,OMIM:108500,Orphanet:ORPHA97,SNOMED CT:420932006 Epileptic encephalopathy, early infantile, 42;Episodic ataxia type 2 germline 19 13308496 TATCATTGGGAGCATCTTCGAGGTCATCTGGGCTGTCATAAAACCTGGCACATCCTTTGGA 794728257 197627 NM_000138.4(FBN1):c.6871G>A (p.Asp2291Asn) FBN1 Feb 18, 2015 MedGen:CN517202 not provided germline 15 48430671 CAGCGGAGACCTGATGGAGAAGGCTGTGTAGGTAAGAGGATCCCTGTGGAAGGAGCTTTGA 104886052 35610 NM_000495.4(COL4A5):c.430G>A (p.Gly144Ser) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108571458 CCAGGCAGTCCCGGTTTTCCTGGTTTACAGGGTCCTCCAGTAAGTTATAAAATTTGGGATT 104886384 35997 NM_000495.4(COL4A5):c.3605-1G>A COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108668318 TTTATCTTCTAATTATACTTTACTTTCATAGGCCAAAAGGGTGATGGAGGATTACCTGGGA 121918243 16464 NM_015506.2(MMACHC):c.482G>A (p.Arg161Gln) MMACHC Aug 09, 2017 MedGen:C1828210,OMIM:153870,Orphanet:ORPHA251287,SNOMED CT:424169002;MedGen:C1848561,OMIM:277400,Orphanet:ORPHA26;MedGen:C1848561,OMIM:277400,Orphanet:ORPHA26;MedGen:CN517202;MedGen:CN169374 Bull's eye maculopathy;Methylmalonic acidemia with homocystinuria;Methylmalonic acidemia with homocystinuria;not provided;not specified germline;inherited 1 45508848 ACCCCCGATTTGGGGGCTGGTTTGCCATCCGAGGGGTAGTGCTGCTGCCAGGGATAGAGGT 397515817 51546 NM_000138.4(FBN1):c.4955G>A (p.Cys1652Tyr) FBN1 Apr 29, 2009 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006 Marfan syndrome germline 15 48464009 TTTCTCTTTGGATTATAGATGTGAATGAATGTGAGACTCCTGGAATCTGTGGTCCAGGGAC 587776653 22283 NM_003001.3(SDHC):c.405+1G>A SDHC Jan 04, 2011 MedGen:C1858592,OMIM:604287,Orphanet:ORPHA139411;Human Phenotype Ontology:HP:0100723,MeSH:D046152,MedGen:C0238198,OMIM:606764,Orphanet:ORPHA44890;MedGen:C1708353,Orphanet:ORPHA29072;MedGen:C1847319,OMIM:606864,Orphanet:ORPHA97286 Carney triad;Gastrointestinal stroma tumor;Hereditary Paraganglioma-Pheochromocytoma Syndromes;Paraganglioma and gastric stromal sarcoma germline 1 161356841 TATCATACCTGGAATGGGATCCGACACTTGGTAAGTTAATTCGGGATTTGCACATTTTCTC 121918016 28720 NM_000478.5(ALPL):c.1366G>A (p.Gly456Arg) ALPL Dec 01, 1996 Human Phenotype Ontology:HP:0003239,MedGen:C0268412,OMIM:241500,Orphanet:ORPHA247651,SNOMED CT:55236002 Infantile hypophosphatasia germline 1 21577439 GCTGTGCCCCTGCGCCACGAGACCCACGGCGGGGAGGACGTGGCCGTCTTCTCCAAGGGCC 120074193 18183 NM_000218.2(KCNQ1):c.805G>A (p.Gly269Ser) KCNQ1 Aug 09, 2017 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MeSH:D008133,MedGen:C0023976,SNOMED CT:9651007;MedGen:C0035828,OMIM:192500,Orphanet:ORPHA101016,SNOMED CT:20852007;MedGen:CN517202 Congenital long QT syndrome;Long QT syndrome;Long QT syndrome 1;not provided germline 11 2572870 GCCTAGGAGCTGATAACCACCCTGTACATCGGCTTCCTGGGCCTCATCTTCTCCTCGTACT 767196276 453036 NM_015512.4(DNAH1):c.12339G>A (p.Trp4113Ter) DNAH1 May 18, 2017 MedGen:CN337166,OMIM:617576 SPERMATOGENIC FAILURE 18 germline 3 52399099 GATCCAAGATGGCATCCCAGCTGTCTTCTGGATCAGTGGATTCTTCTTCCCCCAGGCTTTC 267607888 95518 NM_000249.3(MLH1):c.2103+1G>A MLH1 Sep 05, 2013 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:CN517202 Lynch syndrome;not provided germline;unknown 3 37049018 TCTGAGGAGTCGACCCTCTCAGGCCAGCAGGTACAGTGGTGATGCACACTGGCACCCCAGG 113994112 32451 NM_001845.5(COL4A1):c.3706G>A (p.Gly1236Arg) COL4A1 Mar 08, 2011 MedGen:CN032791,OMIM:175780 Porencephaly 1 germline 13 110170583 TCCCCAGGCCATGCCACGGAGGGGCCCAAAGGAGACCGCGGACCTCAGGGCCAGCCTGGCC 762864856 480412 NM_001146040.1(GLRA1):c.477-1G>A GLRA1 - MedGen:C1835614,OMIM:149400,Orphanet:ORPHA3197 Hyperekplexia hereditary inherited 5 151856384 CTGCATCATTCAAAATCCCTTCTCTTCCCAGAATCACCCTGACACTGGCCTGCCCCATGGA 763500364 39137 NR_023343.1(RNU4ATAC):n.111G>A RNU4ATAC Apr 08, 2011 MedGen:C1859452,OMIM:210710,SNOMED CT:254102008 Osteodysplastic primordial dwarfism, type 1 germline 2 121530990 CCGCATCAACTAGAGCTTTTGCTTTATTTTGGTGCAATTTTTGGAAAAATGAAAACCTGTT 72558200 23458 NM_000392.4(ABCC2):c.3449G>A (p.Arg1150His) ABCC2 Oct 05, 2001 MedGen:C0022350,OMIM:237500,Orphanet:ORPHA234,SNOMED CT:44553005 Dubin-Johnson syndrome germline 10 99836125 TTTATGTGTCTACCTCCCGCCAGCTGAGGCGTCTGGACTCTGTCACCAGGTCCCCAATCTA 863225280 214504 NM_001287174.1(ABCC8):c.683G>A (p.Gly228Asp) ABCC8 Apr 28, 2017 MedGen:C3888018,Orphanet:ORPHA276525;MedGen:CN517202 Familial hyperinsulinism;not provided germline 11 17461722 TGCAGCCCTTCGTGAATCTGCTGTCCAAAGGCACCTACTGGTGGATGAACGCCTTCATCAA 121909549 33058 NM_000488.3(SERPINC1):c.1274G>A (p.Arg425His) SERPINC1 Oct 01, 1989 MedGen:C0272375,OMIM:613118,Orphanet:ORPHA82,SNOMED CT:36351005 Antithrombin III deficiency germline 1 173904010 CTGCAAGTACCGCTGTTGTGATTGCTGGCCGTTCGCTAAACCCCAACAGGGTGACTTTCAA 372388344 431531 NM_022124.5(CDH23):c.9886G>A (p.Asp3296Asn) CDH23 Sep 27, 2017 MedGen:CN432550,OMIM:617540 PITUITARY ADENOMA 5, MULTIPLE TYPES germline 10 71815099 CACGGCAGCACGGGCACGCTGCTGGCCACCGACCTCAACAGCCTGCCCGAGGAAGACCAGA 587779476 106915 NM_000090.3(COL3A1):c.1466G>A (p.Gly489Glu) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188995056 TTGTCTTTCATTATTTTCAGGGTGCCCCTGGGTTCCGAGGACCTGCTGGACCAAATGGCAT 121964882 27243 NM_000490.4(AVP):c.262G>A (p.Gly88Ser) AVP Feb 01, 1991 Human Phenotype Ontology:HP:0000863,MedGen:C0687720,OMIM:125700,Orphanet:ORPHA178029,SNOMED CT:45369008 Neurohypophyseal diabetes insipidus germline 20 3083037 GAGAACTACCTGCCGTCGCCCTGCCAGTCCGGCCAGAAGGCGTGCGGGAGCGGGGGCCGCT 397516101 52008 NM_000257.3(MYH7):c.1358G>A (p.Arg453His) MYH7 Jul 11, 2017 MedGen:C3495498,OMIM:192600;Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Familial hypertrophic cardiomyopathy 1;Hypertrophic cardiomyopathy;Primary familial hypertrophic cardiomyopathy;not provided germline 14 23429004 TCAATGCCACCCTGGAGACCAAGCAGCCACGCCAGTACTTCATAGGAGTCCTGGACATCGC 397514698 59839 NM_002072.4(GNAQ):c.548G>A (p.Arg183Gln) GNAQ Jul 19, 2016 Gene:246230,Human Phenotype Ontology:HP:0025104,MedGen:C0340803,OMIM:163000,Orphanet:ORPHA211247;MedGen:C1274879,Orphanet:ORPHA2875,SNOMED CT:403545005;MedGen:C0038505,OMIM:185300 Capillary malformations, congenital;Port-wine stain with oculocutaneous melanosis;Sturge-Weber syndrome somatic 9 77797577 TGCCTACGCAACAAGATGTGCTTAGAGTTCGAGTCCCCACCACAGGGATCATCGAATACCC 118192200 22430 NM_172107.3(KCNQ2):c.620G>A (p.Arg207Gln) KCNQ2 Jul 12, 2016 MedGen:C3150986,OMIM:613720,Orphanet:ORPHA439218;MedGen:C3149075;MedGen:CN517202 Early infantile epileptic encephalopathy 7;Seizures, benign familial neonatal, 1, and/or myokymia;not provided germline 20 63444729 TCCGGAGCCTGCGCTTCCTGCAGATTCTGCGGATGATCCGCATGGACCGGCGGGGAGGCAC 80358018 97145 NM_007294.3(BRCA1):c.81-1G>A BRCA1 Aug 26, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline 17 43115780 ATTTTCTTTTTCTCCCCCCCTACCCTGCTAGTCTGGAGTTGATCAAGGAACCTGTCTCCAC 1064793904 406320 NM_000094.3(COL7A1):c.7688G>A (p.Gly2563Asp) COL7A1 Jul 20, 2015 MedGen:CN517202 not provided germline 3 48568854 CTGAATCCCTCTCCTGGTCACTCCCACAGGGCAGCAAGGGAGAGCCTGGTGACAAGGGCTC 587779595 107055 NM_000090.3(COL3A1):c.2933G>A (p.Gly978Asp) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189005351 CAAAATGTTTTTCATTCCTTTGTATACAGGGTGAAAGTGGGAAACCAGGAGCTAACGGTCT -1 432148 NM_000444.5(PHEX):c.1103G>A (p.Trp368Ter) PHEX Nov 06, 2013 MedGen:C0733682,OMIM:307800,Orphanet:ORPHA89936,SNOMED CT:82236004 Familial X-linked hypophosphatemic vitamin D refractory rickets germline X 22111490 TTAACAGGACCATTGCCAACTATTTGGTGTGGAGAATGGTTTATTCCAGAATTCCAAACCT 796053365 202306 NM_003165.3(STXBP1):c.1061G>A (p.Cys354Tyr) STXBP1 Oct 06, 2016 MedGen:CN517202 not provided germline 9 127673212 ACTCCACCCACCTGCACCTTGCTGAGGACTGTATGAAGCATTACCAAGGCACCGTAGACAA 886041507 264944 NM_194277.2(FRMD7):c.905+1G>A FRMD7 Feb 10, 2016 MedGen:CN517202 not provided germline X 132082362 CTGCAGCAAGGGTTCCAGTTTCCGCTATAGGTAATTAAACAATGCACATAGGCAAACTGCT 587776667 22859 NM_000314.6(PTEN):c.253+1G>A PTEN Jul 05, 2017 MedGen:CN072330,OMIM:158350;Human Phenotype Ontology:HP:0012114,MedGen:C0476089,OMIM:608089,SNOMED CT:254878006;MedGen:C1959582,OMIM:601728,Orphanet:ORPHA306498;MedGen:CN517202 Cowden syndrome 1;Endometrial carcinoma;PTEN hamartoma tumor syndrome;not provided germline 10 87931090 ATTATGACACCGCCAAATTTAATTGCAGAGGTAGGTATGAATGTACTGTACTATGTTGTAT 771732955 248760 NM_003896.3(ST3GAL5):c.601G>A (p.Gly201Arg) ST3GAL5 Sep 16, 2016 MedGen:C1836824,OMIM:609056,Orphanet:ORPHA171714 Amish infantile epilepsy syndrome germline 2 85847922 ACCTGTCGGCGCTGTGTGGTTATTGGAAGCGGAGGAATACTGCACGGATTAGAACTGGGCC 794727944 196117 NM_001080463.1(DYNC2H1):c.12177+1G>A DYNC2H1 Feb 10, 2015 MedGen:C2751311,OMIM:613091,SNOMED CT:254051008 Short-rib thoracic dysplasia 3 with or without polydactyly germline 11 103358360 GTCCTCAATCTCTGGAAGAAACTAAACCAGGTTAGTAGTGGAATATTCTTCTGATTCTTTT 180177161 200601 NM_000030.2(AGXT):c.1079G>A (p.Arg360Gln) AGXT Nov 27, 2014 MedGen:C0268164,OMIM:259900,Orphanet:ORPHA93598,SNOMED CT:65520001 Primary hyperoxaluria, type I germline 2 240878721 TCAGCCCGCCCTGTGCCCCCCAGGTGCTGCGGATCGGCCTGCTGGGCTGCAATGCCACCCG 1135402872 425161 NM_001042492.2(NF1):c.5492G>A (p.Trp1831Ter) NF1 Feb 02, 2017 MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003 Neurofibromatosis, type 1 germline 17 31327722 TCCAGTCTATCATTCATATCCGGACCCGCTGGGAACTGTCACAGCCCGACTCTATCCCCCA 121913006 31849 NM_001943.4(DSG2):c.146G>A (p.Arg49His) DSG2 Jun 09, 2017 MedGen:C0349788,Orphanet:ORPHA247,SNOMED CT:253528005,SNOMED CT:281170005;MedGen:C1857777,OMIM:610193;MedGen:CN517202 Arrhythmogenic right ventricular cardiomyopathy;Arrhythmogenic right ventricular cardiomyopathy, type 10;not provided germline 18 31519867 CTAAACATCCTCATTTAGTGCGGCAAAAGCGCGCCTGGATCACCGCCCCCGTGGCTCTTCG 886041749 264355 NM_000089.3(COL1A2):c.2054G>A (p.Gly685Asp) COL1A2 Apr 21, 2017 MedGen:CN517202 not provided germline 7 94419526 AGGGTGCTCCTGGTGCTGTAGGTGCCCCTGGTCCTGCTGGAGCCACAGGTGACCGGGTAAG 201422368 190033 NM_178454.5(DRAM2):c.494G>A (p.Trp165Ter) DRAM2 May 12, 2015 MedGen:CN231743,OMIM:616502;Human Phenotype Ontology:HP:0000556,MedGen:C0854723,Orphanet:ORPHA71862,SNOMED CT:314407005 Cone-rod dystrophy 21;Retinal dystrophy germline 1 111120539 TCTTCTGGATCAGACTGTTGTTGGTTATCTGGTGTGGAGTAAGTGCACTTAGCAGTATCCT 121908419 20395 NM_014384.2(ACAD8):c.1129G>A (p.Gly377Ser) ACAD8 Aug 18, 2016 MedGen:C1969809,OMIM:611283,Orphanet:ORPHA79159,SNOMED CT:445274004;MedGen:CN517202 Deficiency of isobutyryl-CoA dehydrogenase;not provided germline;unknown 11 134262556 AACCAGGCCTTGCAGATGCACGGGGGCTACGGCTACCTGAAGGATTACGCTGTTCAGCAGT 587776445 165895 NM_002775.4(HTRA1):c.821G>A (p.Arg274Gln) HTRA1 Sep 11, 2014 MedGen:C1838577,OMIM:600142,Orphanet:ORPHA199354 Cerebral autosomal recessive arteriopathy with subcortical infarcts and leukoencephalopathy germline 10 122506734 TCCTGCTGCTTGGCCGCTCCTCAGAGCTGCGGCCGGGAGAGTTCGTGGTCGCCATCGGAAG 80358219 27229 NM_001166120.1(HSD3B2):c.424G>A (p.Glu142Lys) HSD3B2 Jun 01, 2002 MedGen:C0342471,OMIM:201810,SNOMED CT:54470008 3 beta-Hydroxysteroid dehydrogenase deficiency germline 1 119421925 TCCTACAAGGAAATCATCCAGAACGGCCACGAAGAAGAGCCTCTGGAAAACACATGGCCCA 879255045 246364 NM_000527.4(LDLR):c.1843G>A (p.Glu615Lys) LDLR Dec 16, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11116996 CTGGCCCACCCCTTCTCCTTGGCCGTCTTTGAGGTGTGGCTTACGTACGAGATGCAAGCAC 121909715 31219 NM_000177.4(GSN):c.640G>A (p.Asp214Asn) GSN Apr 13, 2017 MedGen:C1622345,OMIM:105120,SNOMED CT:419398009;MedGen:CN517202 Meretoja syndrome;not provided germline 9 121310819 CCTGTGTCCTGGGAGAGCTTCAACAATGGCGACTGCTTCATCCTGGACCTGGGCAACGTGA -1 433316 NM_000132.3(F8):c.5186G>A (p.Gly1729Glu) F8 May 02, 2017 MedGen:CN169374 not specified germline X 154928604 TTGCTGCAGTGGAGAGGCTCTGGGATTATGGGATGAGTAGCTCCCCACATGTTCTAAGAAA 140629318 195844 NM_000018.3(ACADVL):c.637G>A (p.Ala213Thr) ACADVL Jun 14, 2016 MedGen:C3887523,OMIM:201475,Orphanet:ORPHA26793,SNOMED CT:237996001,SNOMED CT:237997005 Very long chain acyl-CoA dehydrogenase deficiency germline 17 7221966 GCTCTCTCCCCAACAGGGGAGACTGTGGCCGCTTTCTGTCTAACCGAGCCCTCAAGCGGGT 879253822 224658 NM_000255.3(MUT):c.-39-1G>A MUT Oct 23, 2017 MedGen:C1855114,OMIM:251000;MedGen:CN517202 Methylmalonic aciduria due to methylmalonyl-CoA mutase deficiency;not provided germline 6 49459506 AAATGTTTTTACTCTATGTTTCTTTTTCTAGGTCAGTTCTTATTTCTATTGGGTGTTTCCA 121909010 22172 NM_000492.3(CFTR):c.3947G>A (p.Trp1316Ter) CFTR Dec 13, 1990 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline 7 117652915 CCTATGAACAGTGGAGTGATCAAGAAATATGGAAAGTTGCAGATGAGGTAAGGCTGCTAAC 1057519613 185674 NM_001128430.1(SMARCAD1):c.1281+665G>A SMARCAD1 Dec 01, 2014 MedGen:C1851080,OMIM:136000 Adermatoglyphia germline 4 94253672 GCGTTAGGTGAAGGGAAGGCATAAGCACTGGTAAGTACACTTTGCATGATCATTTTCTGGA 104894840 25771 NM_000169.2(GLA):c.680G>A (p.Arg227Gln) GLA Dec 15, 2016 Human Phenotype Ontology:HP:0001071,MedGen:C0002986,OMIM:301500,Orphanet:ORPHA324,SNOMED CT:16652001;MedGen:CN517202 Fabry disease;not provided germline X 101398906 CAGAAATCCGACAGTACTGCAATCACTGGCGAAATTTTGCTGACATTGATGATTCCTGGAA 281860269 38766 NM_005211.3(CSF1R):c.1897G>A (p.Glu633Lys) CSF1R Aug 30, 2012 Gene:8156,MedGen:C1857300,OMIM:221820 Hereditary diffuse leukoencephalopathy with spheroids germline 5 150060934 CATGCTGATGAGAAGGAGGCCCTCATGTCCGAGCTGAAGATCATGAGCCACCTGGGCCAGC 121913053 31583 NM_000186.3(CFH):c.2876G>A (p.Cys959Tyr) CFH Oct 03, 1997 MedGen:C0398777,OMIM:609814,Orphanet:ORPHA200421,SNOMED CT:234622003 Factor H deficiency germline 1 196740712 ATCAGTATGGAGAAGAAGTTACGTACAAATGTTTTGAAGGTTTTGGAATTGATGGGCCTGC 397516677 53378 NM_001399.4(EDA):c.871G>A (p.Gly291Arg) EDA Apr 04, 2016 Human Phenotype Ontology:HP:0007607,MedGen:C1706004,Orphanet:ORPHA238468;MedGen:CN517202 Hypohidrotic ectodermal dysplasia;not provided germline X 70033475 CCCAAGGTGTTTAAGCTACATCCCCGCAGCGGGGAGCTGGAGGTACTGGTGGACGGCACCT 199469643 106422 NM_017415.2(KLHL3):c.1292G>A (p.Arg431Gln) KLHL3 - Gene:7830,MedGen:C1449844,OMIM:145260,Orphanet:ORPHA757,SNOMED CT:15689008 Pseudohypoaldosteronism, type 2 germline 5 137637323 GGTTCTTTGTGGCCCCGATGAACACGCGGCGGAGCAGTGTGGGTGTGGGCGTTGTGGAGGG 121909602 31914 NM_001863.4(COX6B1):c.59G>A (p.Arg20His) COX6B1 Jun 01, 2008 MedGen:C0268237,OMIM:220110,Orphanet:ORPHA254905,SNOMED CT:67434000 Hepatic failure, early-onset, and neurologic disorder due to cytochrome C oxidase deficiency germline 19 35651302 AGAACTACAAGACCGCCCCTTTTGACAGCCGCTTCCCCAACCAGAACCAGACTAGAAACTG 1057519701 362782 NM_000222.2(KIT):c.1468G>A (p.Glu490Lys) KIT Oct 02, 2014 Human Phenotype Ontology:HP:0100522,MeSH:D013945,MedGen:C0040100,Orphanet:ORPHA99867 Thymoma somatic 4 54725978 TCTAGTGCATTCAAGCACAATGGCACGGTTGAATGTAAGGCTTACAACGATGTGGGCAAGA 28939710 21282 NM_004700.3(KCNQ4):c.961G>A (p.Gly321Ser) KCNQ4 Sep 27, 2016 MedGen:C2677637,OMIM:600101 DFNA 2 Nonsyndromic Hearing Loss germline 1 40820180 GCCCTATCCCTCTAGGGCATCCTAGGCTCCGGCTTTGCCCTGAAGGTCCAGGAGCAGCACC 587782603 419734 NM_000314.6(PTEN):c.493G>A (p.Gly165Arg) PTEN Aug 16, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline 10 87952118 TTTGGCTTCTCTTTTTTTTCTGTCCACCAGGGAGTAACTATTCCCAGTCAGAGGCGCTATG 121434427 21748 NM_004550.4(NDUFS2):c.683G>A (p.Arg228Gln) NDUFS2 Feb 01, 2001 MedGen:C1838979,OMIM:252010 Mitochondrial complex I deficiency germline 1 161209912 CTGGAGCCCGAATGCATGCTGCTTATATCCGGCCAGGAGGAGTGCACCAGGTGAGCAGGTC 199954546 437659 NM_003494.3(DYSF):c.2810+1G>A DYSF Oct 11, 2017 MedGen:C1850889,OMIM:253601,Orphanet:ORPHA268 Limb-girdle muscular dystrophy, type 2B unknown 2 71568339 TGGAGATTGGTTCGTGTGTCCGGAGAAGACGTGAGTCGTGGGCAGGGAGGGCTGGGGAGAG 777046879 200684 NM_138413.3(HOGA1):c.973G>A (p.Gly325Ser) HOGA1 Nov 27, 2014 MedGen:C3150878,OMIM:613616,Orphanet:ORPHA93600 Primary hyperoxaluria, type III germline 10 97611648 GAGGCACTGCGCATGGATTTCACCAGCAACGGCTGGCTCTGAGGGCAGGCAGGGTCCATGG 964335184 424386 NM_001080483.2(MYMK):c.298G>A (p.Gly100Ser) MYMK Jul 19, 2017 MedGen:C1850746,OMIM:254940,Orphanet:ORPHA1358,SNOMED CT:429753001 Congenital nonprogressive myopathy with Moebius and Robin sequences germline 9 133518975 GAACCCAAGAGGTCAACATTTGTGATGTTCGGCGTCCTGACCATTGCTGTGCGGATCTACC 587784027 168499 NM_133433.3(NIPBL):c.6954+1G>A NIPBL Feb 08, 2013 MedGen:CN029798,OMIM:122470 Cornelia de Lange syndrome 1 germline 5 37049302 CTAAATCAAGGTCTTATTCATCCAGTTCAGGTAAGCATGTTTTATGGCAGCAGCACTTACT 886039401 259878 NM_194456.1(KRIT1):c.1146+1G>A KRIT1 Apr 23, 2015 MedGen:CN517202 not provided germline 7 92226525 ATTCTCCTAAACCACCCAGAAACGGATAGAGTAAGTTATTTTCCAGGTTTTTAAAAATAAT 886043909 272713 NM_004006.2(DMD):c.2861G>A (p.Trp954Ter) DMD Jun 21, 2016 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Duchenne muscular dystrophy germline X 32472252 ATCAGGAGACCATGAGTGCCATCAGGACATGGGTCCAGCAGTCAGAAACCAAACTCTCCAT 387906952 39571 NM_000153.3(GALC):c.1630G>A (p.Asp544Asn) GALC Dec 01, 2010 MedGen:C0023521,OMIM:245200,Orphanet:ORPHA487,SNOMED CT:192782005 Galactosylceramide beta-galactosidase deficiency germline 14 87945593 CTCAACCAGAGACCCATTACATGGGCTGCCGATGCATCCAACACAATCAGTATTATAGGAG 137852210 25825 NM_194277.2(FRMD7):c.70G>A (p.Gly24Arg) FRMD7 Mar 01, 2011 MedGen:C1839580,OMIM:310700 Infantile nystagmus, X-linked germline X 132100704 TCTTTTTGTTTTGTTTAGCAAAAGTCATCCGGGAAGGCATTGTTTAACCTGAGTTGCAGCC 746307931 262357 NM_004937.2(CTNS):c.922G>A (p.Gly308Arg) CTNS Oct 06, 2016 MedGen:CN035091,Orphanet:ORPHA213,SNOMED CT:190681003 Cystinosis germline 17 3659927 AGCATTGGCAACGTGCTCCTGGACTTCACCGGGGGCAGCTTCAGCCTCCTGCAGATGTTCC 863225215 214352 NM_015272.4(RPGRIP1L):c.2305-1G>A RPGRIP1L Feb 23, 2015 MedGen:C1969053,OMIM:611560 Joubert syndrome 7 unknown 16 53646004 TTCCTTAATATAAATATGTATGTTTTTCCAGTTAAGTCAGCAAGCACCCAAAACTGCTCAA 137854545 15422 NM_000308.3(CTSA):c.448G>A (p.Val150Met) CTSA Dec 01, 1996 MedGen:C0268233,OMIM:256540,Orphanet:ORPHA351,SNOMED CT:35691006;MedGen:CN068414 Combined deficiency of sialidase AND beta galactosidase;Galactosialidosis, early infantile germline;inherited 20 45892434 AATGTGTTATACCTGGAGTCCCCAGCTGGGGTGGGCTTCTCCTACTCCGATGACAAGTTTT 1060501086 400712 NM_000138.4(FBN1):c.1982G>A (p.Cys661Tyr) FBN1 Jul 18, 2016 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006 Marfan syndrome germline 15 48503918 CCTGTTTAGACACACACATGCGGAGCACATGCTATGGTGGATACAAGAGAGGCCAGTGTAT 111033790 36625 NM_000155.3(GALT):c.947G>A (p.Trp316Ter) GALT May 22, 2014 MedGen:C0268151,OMIM:230400,Orphanet:ORPHA79239,SNOMED CT:124354006 Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase germline;unknown 9 34649452 GATCAGAGGCTGGGGCCAACTGGAACCATTGGCAGCTGCACGCTCATTACTACCCTCCGCT 199718602 223695 NM_013447.3(ADGRE2):c.1475G>A (p.Cys492Tyr) ADGRE2 Jun 24, 2016 Gene:29764,MedGen:C1852146,OMIM:125630 Vibratory urticaria germline 19 14755069 GTGTCTTCTGGGAGCATGGCCAGAATGGATGTGGTCACTGGGCCACCACAGGCTGCAGCAC 281874675 35780 NM_000495.4(COL4A5):c.1726G>A (p.Gly576Ser) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108597515 CCTGGAGCTCCAGGGCTTCCTGGTTTACCTGGCACTCCTGGACAGGATGGATTGCCAGGGC 587779656 107145 NM_000090.3(COL3A1):c.701G>A (p.Gly234Asp) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188990106 TTCTTTATTTCTCTACCTAGGGAGAATCAGGTAGACCCGGACGACCTGGAGAGCGAGGATT 104894124 27839 NM_004959.4(NR5A1):c.43G>A (p.Val15Met) NR5A1 Mar 01, 2007 MedGen:C2751824,OMIM:612965,Orphanet:ORPHA98085 46,XY sex reversal, type 3 germline 9 124503353 TACGACGAGGACCTGGACGAGCTGTGCCCCGTGTGCGGGGACAAGGTGTCCGGCTACCACT 879254452 245441 NM_000527.4(LDLR):c.260G>A (p.Trp87Ter) LDLR Mar 25, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11102733 GCCGTGTCAACCGCTGCATTCCTCAGTTCTGGAGGTGCGATGGCCAAGTGGACTGCGACAA 121909504 33405 NM_000751.2(CHRND):c.238G>A (p.Glu80Lys) CHRND Jul 01, 2001 MedGen:C4225371,OMIM:616322 Myasthenic syndrome, congenital, 3b, fast-channel germline 2 232527440 GAGGAGACCCTCACTACCAATGTGTGGATAGAGCACGTAAGAATGCCCCTCCCAGCCGGGC 1057516164 354126 NM_023067.3(FOXL2):c.612G>A (p.Trp204Ter) FOXL2 Nov 03, 2016 MedGen:C0220663,OMIM:110100,Orphanet:ORPHA126 Blepharophimosis, ptosis, and epicanthus inversus germline 3 138946111 CCTGCAGTCTGGCTTCCTCAACAACTCGTGGCCGCTACCGCAGCCTCCCTCACCCATGCCC 267607149 33474 NM_021625.4(TRPV4):c.2389G>A (p.Glu797Lys) TRPV4 Apr 02, 2014 MedGen:C0265281,OMIM:156530,Orphanet:ORPHA2635,SNOMED CT:22764001;MedGen:C0027868,Orphanet:ORPHA68381;Human Phenotype Ontology:HP:0002652,MedGen:C0410528,SNOMED CT:105986008;MedGen:C3159322,OMIM:184095;MedGen:C0265280,OMIM:184252,Orphanet:ORPHA93314 Metatrophic dysplasia;Neuromuscular Diseases;Skeletal dysplasia;Spondyloepiphyseal dysplasia Maroteaux type;Spondylometaphyseal dysplasia, Kozlowski type germline 12 109784385 CACTGGAACCAGAACTTGGGCATCATCAACGAGGACCCGGGCAAGAATGAGACCTACCAGT 751590073 200152 NM_000048.3(ASL):c.545G>A (p.Arg182Gln) ASL Dec 04, 2015 MedGen:C0268547,OMIM:207900,Orphanet:ORPHA23,SNOMED CT:41013004 Argininosuccinate lyase deficiency germline 7 66086764 CTTCCCACAGCCACGCCGTGGCACTGACCCGAGACTCTGAGCGGCTGCTGGAGGTGCGGAA 863223361 205474 NM_001376.4(DYNC1H1):c.1738G>A (p.Glu580Lys) DYNC1H1 Oct 31, 2014 Human Phenotype Ontology:HP:0002269,MedGen:C1837249 Abnormality of neuronal migration de novo 14 101985963 GATCAGCTTGGCACAGCCAAGAATGCCAACGAGATGTTTAGGATTTTCTCCAGGTTTAATG 121918668 27723 NM_000549.4(TSHB):c.145G>A (p.Gly49Arg) TSHB Aug 01, 1989 MedGen:C0271789,OMIM:275100,Orphanet:ORPHA90674,SNOMED CT:82598004 Secondary hypothyroidism germline 1 115033507 TGCCTAACCATCAACACCACCATCTGTGCTGGATATTGTATGACACGGGTATGTAGTTCAT 747724352 485749 NM_000197.1(HSD17B3):c.397G>A (p.Gly133Arg) HSD17B3 Sep 28, 2010 MedGen:C0033804 Pseudohermaphroditism germline 9 96251474 TTTTGCTTCTTTCTGCCAGTCAACAATGTCGGAATGCTTCCAAACCTTCTCCCAAGCCATT 368488511 409244 NM_014080.4(DUOX2):c.3329G>A (p.Arg1110Gln) DUOX2 Feb 24, 2017 MedGen:CN517202 not provided germline 15 45099748 CCATGTGCCGCAACCTCATAACCTTCCTGCGAGAGACTTTCCTCAACCGCTATGTGCCTTT 886041462 264498 NM_004523.3(KIF11):c.1702+1G>A KIF11 Dec 23, 2015 MedGen:CN517202 not provided germline 10 92632694 CCATGCTAGAAGTACATAAGACCTTATTTGGTAAGTTCAGGCTGTTCTGTTCTAGTCTTGA 121918254 16923 NM_000255.3(MUT):c.1867G>A (p.Gly623Arg) MUT Jan 31, 2017 MedGen:C1855115;MedGen:C1855114,OMIM:251000;MedGen:CN517202 METHYLMALONIC ACIDURIA, mut(0) TYPE;Methylmalonic aciduria due to methylmalonyl-CoA mutase deficiency;not provided germline 6 49440295 CGCAGACCTCGTCTTCTTGTAGCAAAAATGGGACAAGATGGCCATGACAGAGGAGCAAAAG -1 440187 NM_001080463.1(DYNC2H1):c.8311+1G>A DYNC2H1 Jun 01, 2017 MedGen:C0265275,Orphanet:ORPHA474,SNOMED CT:75049004 Jeune thoracic dystrophy maternal 11 103203777 TTGGACCAGTCTTCAATTACTTCACATATAGTAAGTGACATAGAATTCATTAATCAAATCA 121434358 16986 NM_030957.3(ADAMTS10):c.73G>A (p.Ala25Thr) ADAMTS10 Dec 01, 2008 MedGen:C1869114,OMIM:277600 Weill-Marchesani syndrome 1 germline 19 8605638 GGGCTGGGCCTCATGTTCGAGGTCACGCACGCCTTCCGGTCTCAAGGTAGGGGAAGTCTGG 121909534 33217 NM_000034.3(ALDOA):c.619G>A (p.Glu207Lys) ALDOA Apr 25, 1996 MedGen:C0272066,OMIM:611881,Orphanet:ORPHA57,SNOMED CT:111578003 HNSHA due to aldolase A deficiency germline 16 30069384 CATGACTTGAAGCGCTGCCAGTATGTGACCGAGAAGGTAAATGGCTACCTGCCTGACCAGT 62507322 98637 NM_000277.2(PAH):c.1200-1G>A PAH Jul 27, 2015 MedGen:C0031485,OMIM:261600,Orphanet:ORPHA716,SNOMED CT:154735006;MedGen:CN517202 Phenylketonuria;not provided germline 12 102840516 CCTTCACTCAAGCCTGTGGTTTTGGTCTTAGGAACTTTGCTGCCACAATACCTCGGCCCTT 80358197 15725 NM_000147.4(FUCA1):c.1160G>A (p.Trp387Ter) FUCA1 Aug 01, 1993 MedGen:C0016788,OMIM:230000,Orphanet:ORPHA349,SNOMED CT:64716005 Fucosidosis germline 1 23848649 TGCAATGGGAAAAGAACACAACATCTGTATGGTGAGTCTTGTCTTCTGTTGTGTGTAAGAA -1 472546 NM_000465.3(BARD1):c.1385G>A (p.Trp462Ter) BARD1 May 23, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 2 214769242 GTGATCCAAATGTTAAAGACCATGCTGGATGGACACCATTGGTAGTTGTCTGGTTTTTATT -1 441240 NM_000370.3(TTPA):c.366G>A (p.Trp122Ter) TTPA Nov 08, 2016 MedGen:CN517202 not provided germline 8 63066090 ATGATATGCTTTATTTTTTTTAGCACACTGGGACCCCAAAGTTTTTACAGCTTATGACGTA 121909557 33059 NM_000488.3(SERPINC1):c.1240G>A (p.Ala414Thr) SERPINC1 Jan 01, 1996 MedGen:C0272375,OMIM:613118,Orphanet:ORPHA82,SNOMED CT:36351005 Antithrombin III deficiency germline 1 173904044 GACCTGCAGGTAAATGAAGAAGGCAGTGAAGCAGCTGCAAGTACCGCTGTTGTGATTGCTG 199472807 67677 NM_000218.2(KCNQ1):c.1702G>A (p.Gly568Arg) KCNQ1 Jul 14, 2017 MedGen:CN230736;MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MedGen:CN517202 Cardiovascular phenotype;Congenital long QT syndrome;not provided germline 11 2777002 GTCCTTCTCTCCAGGCTGGACCAGTCCATTGGGAAGCCCTCACTGTTCATCTCCGTCTCAG 863223307 31014 NM_000515.4(GH1):c.291+5G>A GH1 Sep 01, 1999 MedGen:C0271567,OMIM:173100,Orphanet:ORPHA231679,SNOMED CT:237687003 Autosomal dominant isolated somatotropin deficiency germline 17 63918012 ACAGGGAGGAAACACAACAGAAATCCGTGAGTGGATGCCTTCTCCCCAGGCGGGGATGGGG 104886060 35632 NM_000495.4(COL4A5):c.574G>A (p.Gly192Arg) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108575937 CAGGGCCTACCTGGTCCCACTGGTATACCAGGGCCAATTGGTCCCCCAGGACCACCAGGTT 397515550 76585 NM_004595.4(SMS):c.200G>A (p.Gly67Glu) SMS Sep 01, 2013 MedGen:C0796160,OMIM:309583,Orphanet:ORPHA3063 Snyder Robinson syndrome germline X 21971926 GCTTTGCCAATTTGAGAATTTACCCACATGGATTGGTGTTGCTGGACCTTCAGAGTTATGA 794728335 197645 NM_000138.4(FBN1):c.6425G>A (p.Cys2142Tyr) FBN1 Oct 03, 2014 MedGen:CN517202 not provided germline 15 48437032 AAGAACCCGATGTCTGTAAACATGGACAGTGCATCAATACAGATGGTTCCTATCGCTGCGA 267607108 33504 NM_001042425.1(TFAP2A):c.874G>A (p.Glu292Lys) TFAP2A Apr 01, 2010 MedGen:C0376524,OMIM:113620 Branchiooculofacial syndrome germline 6 10400587 CTGGCTCCCTCCTCTCCCCTCTTGCCAGGAGAAGCTGTCCACCTAGCCAGGGACTTTGGGT 199422274 47888 NR_001566.1(TERC):n.143G>A TERC May 10, 2012 MedGen:C1851970,OMIM:127550 Dyskeratosis congenita autosomal dominant not provided 3 169764918 TTTCAGCGGGCGGAAAAGCCTCGGCCTGCCGCCTTCCACCGTTCATTCTAGAGCAAACAAA 63750209 426843 NM_001171.5(ABCC6):c.3818G>A (p.Arg1273Lys) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16157727 GGCAGATCGAGTTCCGGGACTTTGGGCTAAGATACCGACCTGAGCTCCCGCTGGCTGTGCA 397514381 36373 NM_000060.4(BTD):c.709G>A (p.Ala237Thr) BTD Dec 04, 2012 MedGen:C0220754,OMIM:253260,Orphanet:ORPHA79241,SNOMED CT:8808004 Biotinidase deficiency not provided 3 15644565 GTGGATCTCATCACCTTTGATACCCCCTTTGCTGGCAGGTTTGGCATCTTCACATGCTTTG 794728786 196710 NM_001035.2(RYR2):c.12470G>A (p.Arg4157Gln) RYR2 Apr 23, 2015 MedGen:CN517202 not provided germline 1 237784182 GGGTCTATTTTGAAATCAGTGAGTCCAGCCGAACCCAGTGGGAGAAGCCCCAGGTCAAGGA 587781457 150767 NM_024675.3(PALB2):c.2712G>A (p.Trp904Ter) PALB2 Oct 21, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline 16 23626272 AGTTTCTCTTTGGAAAGCTCTGGATGCTTGGCAGTGGGAAAAACTTTATACCTGGCACTTC 796053283 203998 NM_006359.2(SLC9A6):c.1631+1G>A SLC9A6 Jan 08, 2015 MedGen:CN517202 not provided germline X 136033494 TTTCCGGATGTGGTACAACTTTGATCATAAGTATCCTTAATTGAGGGAAAAAAAAAAAGGA -1 467938 NM_000088.3(COL1A1):c.3825G>A (p.Trp1275Ter) COL1A1 Dec 13, 2016 MedGen:C0023931,OMIM:166200,SNOMED CT:385482004 Osteogenesis imperfecta type I germline 17 50186497 CTTGCCCTGCCCTACCACAGGAGAGTACTGGATTGACCCCAACCAAGGCTGCAACCTGGAT 267606640 16147 NM_000642.2(AGL):c.3980G>A (p.Trp1327Ter) AGL Jun 26, 2017 MedGen:C1968739;MedGen:C0017922,OMIM:232400,Orphanet:ORPHA308684,SNOMED CT:66937008;MedGen:CN517202 Glycogen storage disease IIIa;Glycogen storage disease type III;not provided germline;paternal;unknown 1 99913557 GAAAGGCTATAAAGGTCTCATATGATGAGTGGAACAGAAAAATACAAGACAACTTTGAAAA 879254781 245971 NM_000527.4(LDLR):c.1069G>A (p.Glu357Lys) LDLR Mar 30, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11111522 AGCCTCTTTCTCTCTCTTCCAGATATCGATGAGTGTCAGGATCCCGACACCTGCAGCCAGC 587779500 106942 NM_000090.3(COL3A1):c.1475G>A (p.Gly492Glu) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188995065 ATTATTTTCAGGGTGCCCCTGGGTTCCGAGGACCTGCTGGACCAAATGGCATCCCAGGAGA 28933402 27807 NM_003172.3(SURF1):c.371G>A (p.Gly124Glu) SURF1 Feb 01, 2000 MedGen:C1850599 Leigh syndrome due to mitochondrial complex IV deficiency germline 9 133353893 ATCTGGAGTATAGGCCAGTGAAGGTCAGGGGGTGCTTTGACCATTCCAAGGAGCTGTATAT -1 434904 NM_000070.2(CAPN3):c.518G>A (p.Trp173Ter) CAPN3 - MedGen:C1869123,OMIM:253600,Orphanet:ORPHA267 Limb-girdle muscular dystrophy, type 2A unknown 15 42387772 CTTCTGTGCAGTTCTGGCGCTATGGAGAGTGGGTGGACGTGGTTATAGATGACTGCCTGCC 863223315 38682 NM_002860.3(ALDH18A1):c.1923+1G>A ALDH18A1 Aug 01, 2011 MedGen:C0268354,OMIM:219150,Orphanet:ORPHA2962,SNOMED CT:238826008,SNOMED CT:59252009 Cutis laxa-corneal clouding-oligophrenia syndrome germline 10 95613741 CAGATCATTGATATGCTGAGAGTGGAACAGGTAAGAGTTCCATAGGACTAGTACATTACTT 886038108 248973 NM_000059.3(BRCA2):c.4689G>A (p.Trp1563Ter) BRCA2 Dec 21, 2016 MedGen:C2675520,OMIM:612555;MedGen:CN169374 Breast-ovarian cancer, familial 2;not specified germline 13 32339044 TAGTGAAATCACCAGTTTTAGCCATCAATGGGCAAAGACCCTAAAGTACAGAGAGGCCTGT 387907167 40269 NM_004285.3(H6PD):c.1076G>A (p.Gly359Asp) H6PD Oct 01, 2008 MedGen:C3551716,OMIM:604931 Cortisone reductase deficiency 1 germline 1 9263569 GGGAGGGCGTGCCTTTCATCCTGATGTCTGGCAAAGCCTTGGACGAGAGAGTGGGCTACGC 1085307816 415367 NM_001845.5(COL4A1):c.324+1G>A COL4A1 Apr 03, 2017 MedGen:CN517202 not provided germline 13 110212573 TCTGGCTACCCTGGAAACCCAGGACTTCCCGTATGTATAGAAAACGTGCTCTACTTCTTTT 933422777 359015 NM_006412.3(AGPAT2):c.492+1G>A AGPAT2 Dec 08, 2016 MedGen:C1720862,OMIM:608594 Congenital generalized lipodystrophy type 1 germline 9 136676960 GACCTGGGCGAGCGCATGGTCAGGGAGAACGTGAGTGTGCAGGGCCGGGCTCGGTGGGGTT 797044867 205278 NM_001845.5(COL4A1):c.2494G>A (p.Gly832Arg) COL4A1 Nov 26, 2013 MeSH:D030342,MedGen:C0950123 Inborn genetic diseases germline 13 110178196 CCTGGAATAAAAGGAGAGAAGGGTTTCCCCGGATTCCCTGGACTGGACATGCCGGGCCCTA 386834187 16409 NM_153704.5(TMEM67):c.1575+1G>A TMEM67 Feb 01, 2006 MedGen:C1846357,OMIM:607361 Meckel syndrome type 3 germline 8 93791320 GATCATGGAGAAGCACATGTCCAGACAGATGTAAGTTTATTTTAACCTTTTAAAATATATA 199570811 245442 NM_000527.4(LDLR):c.261G>A (p.Trp87Ter) LDLR Mar 25, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11102734 CCGTGTCAACCGCTGCATTCCTCAGTTCTGGAGGTGCGATGGCCAAGTGGACTGCGACAAC 121908611 21142 NM_004820.4(CYP7B1):c.1250G>A (p.Arg417His) CYP7B1 Jul 12, 2017 MedGen:C0037772;MedGen:C1849115,OMIM:270800,Orphanet:ORPHA100986;MedGen:CN517202 Spastic paraplegia;Spastic paraplegia 5A;not provided germline 8 64596913 ATTCTTCCTTACAGGAGTTTAGATATGATCGTTTTATAGAAGATGGTAAGAAGAAAACCAC 886041197 264912 NM_001958.3(EEF1A2):c.271G>A (p.Asp91Asn) EEF1A2 Oct 13, 2016 MedGen:CN517202 not provided germline 20 63495909 GAGACCACCAAGTACTACATCACCATCATCGATGCCCCCGGCCACCGCGACTTCATCAAGA 397507554 21189 NM_001011.3(RPS7):c.147+1G>A RPS7 Aug 01, 2013 MedGen:C2675511,OMIM:612563 Diamond-Blackfan anemia 8 germline 2 3575889 CTCAGGGAGCTGAATATTACGGCAGCTAAGGTAAGCTGGCGCTCCCTCGGCTGGGAGGGAG 796053155 201391 NM_021007.2(SCN2A):c.4877G>A (p.Arg1626Gln) SCN2A Nov 28, 2015 MedGen:CN517202 not provided de novo;germline 2 165388683 AAAAGTATTTTGTGTCCCCTACCCTGTTCCGAGTGATCCGTCTTGCCAGGATTGGCCGAAT 398123110 98236 NM_000033.3(ABCD1):c.346G>A (p.Gly116Arg) ABCD1 Apr 12, 2013 MedGen:C0162309,OMIM:300100,Orphanet:ORPHA43,SNOMED CT:65389002 Adrenoleukodystrophy germline X 153725612 TTCCTGTCGGTGTATGTGGCCCGCCTGGACGGAAGGCTGGCCCGCTGCATCGTCCGCAAGG 886041248 264822 NM_001083962.1(TCF4):c.655G>A (p.Asp219Asn) TCF4 May 26, 2016 MedGen:CN517202 not provided germline 18 55279551 AGCACTTTCCCTAGCTCCTTCTTCATGCAAGGTAAGATGCTGCTGCTTCTGAGGGAAAGGC 61751413 105076 NM_000350.2(ABCA4):c.302+1G>A ABCA4 Dec 21, 2017 MedGen:CN517202 not provided germline 1 94111437 TGGAATTGTGTCAAACTATAACAACTCCATGTAAGTGTTGAGATCCCTACCATGCAGGGGA 104886279 36075 NM_000495.4(COL4A5):c.4342G>A (p.Gly1448Ser) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108687526 GATGGTCCCCCTGGTCCAGATGGATTGCAAGGTCCCCCAGGTCCCCCTGGAACCTCCTCTG 793888506 44195 NM_018475.4(TMEM165):c.792+182G>A TMEM165 Jul 18, 2012 MedGen:C3553571,OMIM:614727,Orphanet:ORPHA314667 Congenital disorder of glycosylation type 2k germline 4 55418167 GCCTTCTCCCAGTTCCTGCTACCTGCAGGTGAAATTCTTGTAACCAAGCTCAGTTGGGCTC 151344517 39382 NM_006796.2(AFG3L2):c.2011G>A (p.Gly671Arg) AFG3L2 May 17, 2011 MedGen:C1853249,OMIM:610246,Orphanet:ORPHA101109 Spinocerebellar ataxia 28 germline 18 12337505 ATTGTTCAGTTTGGCATGAATGAAAAGGTTGGGCAAATCTCCTTTGACCTCCCACGTCAGG 121918129 15438 NM_019892.5(INPP5E):c.1304G>A (p.Arg435Gln) INPP5E Feb 23, 2015 Human Phenotype Ontology:HP:0002335,MedGen:C0431399,Orphanet:ORPHA475,SNOMED CT:253175003,SNOMED CT:716997004;MedGen:CN119531,OMIM:213300 Joubert syndrome;Joubert syndrome 1 germline;unknown 9 136432562 CCACAGCAGGTGACGGGAAGGTGGCGGAGCGGCTGCTGGACTACACCAGGACTGTACAAGC 200378205 177147 NM_000153.3(GALC):c.1592G>A (p.Arg531His) GALC Jun 30, 2017 MedGen:C0023521,OMIM:245200,Orphanet:ORPHA487,SNOMED CT:192782005;MedGen:CN517202 Galactosylceramide beta-galactosidase deficiency;not provided germline;unknown 14 87945631 AAGACCCTGGCGAGCATCACTTCACGCTACGCCAAGTTCTCAACCAGAGACCCATTACATG 61748467 39968 NM_000552.4(VWF):c.2279G>A (p.Arg760His) VWF Oct 15, 2009 MedGen:CN517202;MedGen:C1264039,OMIM:193400,Orphanet:ORPHA166078,SNOMED CT:128106003 not provided;von Willebrand disease type 1 germline 12 6046725 ACGCTGTCCTCAGCAGTCCCCTGTCTCATCGCAGTGAGTACTGTCCCCCTGGAAGGCCCAT 63750783 30442 NM_000518.4(HBB):c.47G>A (p.Trp16Ter) HBB Jun 30, 2017 MedGen:C0005283,OMIM:613985,Orphanet:ORPHA848,SNOMED CT:65959000;MedGen:C0271980,SNOMED CT:86715000;MedGen:CN517202;MedGen:CN169374 beta Thalassemia;beta^0^ Thalassemia;not provided;not specified germline;unknown 11 5226975 CTGAGGAGAAGTCTGCCGTTACTGCCCTGTGGGGCAAGGTGAACGTGGATGAAGTTGGTGG -1 427887 NM_014795.3(ZEB2):c.2072G>A (p.Trp691Ter) ZEB2 Oct 02, 2015 MedGen:C1856113,OMIM:235730,Orphanet:ORPHA2152 Mowat-Wilson syndrome germline 2 144399115 TGGGCCTTCCTCAGGAATTTGTGAAGGAATGGTTTGAACAACGAAAAGTCTACCAGTACTC 587779677 107182 NM_000090.3(COL3A1):c.30G>A (p.Trp10Ter) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188974519 CATGATGAGCTTTGTGCAAAAGGGGAGCTGGCTACTTCTCGCTCTGCTTCATCCCACTATT 80358201 23761 NM_005267.4(GJA8):c.142G>A (p.Glu48Lys) GJA8 Jul 01, 1999 MedGen:C1861828,OMIM:116200 Cataract 1 germline 1 147908097 GGCACGGCCGCAGAGTTCGTGTGGGGGGATGAGCAATCCGACTTCGTGTGCAACACCCAGC 267607500 77388 NM_002055.4(GFAP):c.619G>A (p.Glu207Lys) GFAP Jan 08, 2015 MedGen:C0270726,OMIM:203450,Orphanet:ORPHA58,SNOMED CT:81854007;MedGen:CN517202 Alexander's disease;not provided germline 17 44913430 CCCTGGTACCGCTTCTCTCACCCTGGTCAGGAGGTTCGGGAACTCCAGGAGCAGCTGGCCC 121917976 79450 NM_006920.4(SCN1A):c.4901G>A (p.Arg1634Gln) SCN1A Nov 16, 2016 MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002;MedGen:CN517202 Severe myoclonic epilepsy in infancy;not provided de novo;germline;unknown 2 165992341 TCCGAGTGATCCGTCTTGCTAGGATTGGCCGAATCCTACGTCTGATCAAAGGAGCAAAGGG 121913250 172332 NM_002524.4(NRAS):c.34G>A (p.Gly12Ser) NRAS May 31, 2016 Human Phenotype Ontology:HP:0004808,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:ORPHA519,SNOMED CT:17788007;MedGen:C0278701;MeSH:D015179,MedGen:CN236642;Human Phenotype Ontology:HP:0002861,MeSH:D008545,MedGen:C0025202,SNOMED CT:2092003;MeSH:C562393,MedGen:C0151779,SNOMED CT:93655004;MedGen:C0153574,Orphanet:ORPHA213569;Human Phenotype Ontology:HP:0006775,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:ORPHA29073,SNOMED CT:109989006,SNOMED CT:55921005;MeSH:D009190,MedGen:C0026986,OMIM:614286;Human Phenotype Ontology:HP:0030358,MeSH:D002289,MedGen:C0007131,SNOMED CT:254637007;MedGen:CN166718,Orphanet:ORPHA98733;MedGen:CN517202 Acute myeloid leukemia;Adenocarcinoma of stomach;Colorectal Neoplasms;Malignant melanoma;Malignant melanoma of skin;Malignant neoplasm of body of uterus;Multiple myeloma;Myelodysplastic syndrome;Non-small cell lung cancer;Rasopathy;not provided germline;somatic 1 114716127 ACTGAGTACAAACTGGTGGTGGTTGGAGCAGGTGGTGTTGGGAAAAGCGCACTGACAATCC 1057517828 359355 NM_000348.3(SRD5A2):c.100G>A (p.Gly34Arg) SRD5A2 May 10, 2016 MedGen:CN517202 not provided germline 2 31580801 GCCTTGTACGTCGCGAAGCCCTCCGGCTACGGGAAGCACACGGAGAGCCTGAAGCCGGCGG 587777269 131963 NM_001017975.4(HFM1):c.2206G>A (p.Gly736Ser) HFM1 Mar 06, 2014 MedGen:C3810376,OMIM:615724 Premature ovarian failure 9 germline 1 91350738 ATCAGAGCCTTGAAAAATCCATCTCATTATGGTTTGTTACTTTGACTTGGAAAAGTAGTAA 104893742 22738 NM_003865.2(HESX1):c.445G>A (p.Glu149Lys) HESX1 Feb 01, 2007 MedGen:C2750027 Growth hormone deficiency with pituitary anomalies germline 3 57198405 GAAGACTTAGCTCAAAAATTGAATCTAGAGGAAGACAGAATCCAGGTAATTTTCAAATTTA 1085307857 415250 NM_001197104.1(KMT2A):c.4343G>A (p.Cys1448Tyr) KMT2A Mar 27, 2017 MedGen:CN517202 not provided germline 11 118488624 TTCCCATGTTCTTACTATAGTTTGTGTATTGCCAAGTCTGTTGTGAGCCCTTCCACAAGTT 137854590 25964 NM_000397.3(CYBB):c.466G>A (p.Ala156Thr) CYBB Jun 01, 1991 MedGen:C1844378;MedGen:CN517202 Granulomatous disease, chronic, X-linked, variant;not provided germline X 37793793 GACAGGCAAAATGAAAGTTATCTCAATTTTGCTCGAAAGAGAATAAAGGTAAGCCTCTCAT 80338673 17821 NM_000158.3(GBE1):c.1571G>A (p.Arg524Gln) GBE1 Apr 26, 2017 MedGen:C4017118;MedGen:CN734585;MedGen:C0017923,OMIM:232500,SNOMED CT:11179002 Adult polyglucosan body neuropathy;Glycogen storage disease IV, combined hepatic and myopathic;Glycogen storage disease, type IV not provided 3 81577972 ATCGTGGAATACAGCTTCATAAAATGATTCGACTCATTACGCATGGGCTTGGTGGAGAAGG 104893832 23100 NM_004625.3(WNT7A):c.325G>A (p.Ala109Thr) WNT7A Aug 01, 2006 MedGen:C1856728,OMIM:228930,Orphanet:ORPHA2854 Fuhrmann syndrome germline 3 13854777 GCAGGGAGCCGGGAGGCTGCGTTCACCTACGCCATCATTGCCGCCGGCGTGGCCCACGCCA 879255268 227504 NM_198291.2(SRC):c.1579G>A (p.Glu527Lys) SRC Oct 07, 2016 MedGen:C4310789,OMIM:616937,Orphanet:ORPHA480851 Thrombocytopenia 6 germline 20 37403347 GCCTTCCTGGAGGACTACTTCACGTCCACCGAGCCCCAGTACCAGCCCGGGGAGAACCTCT 794726866 190184 NM_000921.4(PDE3A):c.1339G>A (p.Ala447Thr) PDE3A Jun 01, 2015 Gene:8080,MedGen:C1862170,OMIM:112410,Orphanet:ORPHA1276 Brachydactyly with hypertension germline 12 20616299 GTTTCTTCCACTTGGACCACCACCACCTCGGCCACAGGTCTACCCACCTTGGAGCCTGCAC 397516685 53386 NM_001613.2(ACTA2):c.635G>A (p.Arg212Gln) ACTA2 Nov 06, 2017 MedGen:C2673186,OMIM:611788;MedGen:CN118826,Orphanet:ORPHA91387;MedGen:CN517202 Aortic aneurysm, familial thoracic 6;Thoracic aortic aneurysm and aortic dissection;not provided germline 10 88939680 TCTGGTTGACAGCTGAGCGTGAGATTGTCCGGGACATCAAGGAGAAACTGTGTTATGTAGC 121918690 27581 NM_001252634.1(THRB):c.949G>A (p.Ala317Thr) THRB Jul 23, 2013 MedGen:C2937288,OMIM:188570 Thyroid hormone resistance, generalized, autosomal dominant germline 3 24127694 GGCTGCTGCATGGAGATCATGTCCCTTCGCGCTGCTGTGCGCTATGACCCAGAAAGTGAGA 120074190 18179 NM_000218.2(KCNQ1):c.1766G>A (p.Gly589Asp) KCNQ1 Nov 22, 2016 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MedGen:CN034131,OMIM:220400;MedGen:C0035828,OMIM:192500,Orphanet:ORPHA101016,SNOMED CT:20852007;MedGen:CN517202 Congenital long QT syndrome;Jervell and Lange-Nielsen syndrome 1;Long QT syndrome 1;not provided germline 11 2778009 AGAGCAAGGATCGCGGCAGCAACACGATCGGCGCCCGCCTGAACCGAGTAGAAGACAAGGT 1060503282 394464 NM_000038.5(APC):c.2097G>A (p.Trp699Ter) APC Nov 15, 2016 MedGen:C2713442,OMIM:175100 Familial adenomatous polyposis 1 germline 5 112837691 AAGAAATCCTAAAGACCAGGAAGCATTATGGGACATGGGGGCAGTTAGCATGCTCAAGAAC 606231340 136657 NM_000257.3(MYH7):c.2686G>A (p.Asp896Asn) MYH7 - MedGen:C0264789,SNOMED CT:35728003 Familial cardiomyopathy not provided 14 23424143 CTCCCCTCTGTTCCTCACCTTCAGGAACAAGACAACCTGGCAGATGCTGAGGAGCGCTGTG 200411226 174776 NM_000256.3(MYBPC3):c.1484G>A (p.Arg495Gln) MYBPC3 Jul 10, 2017 MedGen:CN230736;MedGen:C1861862,OMIM:115197;Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569;MedGen:CN239295;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Cardiovascular phenotype;Familial hypertrophic cardiomyopathy 4;Hypertrophic cardiomyopathy;MYBPC3-Related Disorders;Primary familial hypertrophic cardiomyopathy;not provided germline;unknown 11 47342718 CTAGGCTGAAGGACGGGGTGGAGCTGACCCGGGAGGAGACCTTCAAATACCGGTTCAAGAA -1 444125 NM_003718.4(CDK13):c.2141G>A (p.Gly714Asp) CDK13 Aug 25, 2017 MedGen:CN517202 not provided germline 7 39999459 AATTTGATATCATCGGAATTATTGGAGAAGGTACTTACGGACAAGTTTACAAAGCCAGGGA 121907930 18486 NM_000135.3(FANCA):c.513G>A (p.Trp171Ter) FANCA Jan 01, 2003 MedGen:C3469521,OMIM:227650 Fanconi anemia, complementation group A germline 16 89810716 CTCCCGTCTTTCCTTCTGTCAAGAATTATGGAAAATACAGGTAAATTTGAGATTGCAAATC 137853101 23057 NM_005327.4(HADH):c.118G>A (p.Ala40Thr) HADH Feb 04, 2013 MedGen:C1291230,OMIM:231530,SNOMED CT:124122005 Deficiency of 3-hydroxyacyl-CoA dehydrogenase germline 4 107990050 GTGACGGTCATCGGCGGCGGGCTGATGGGCGCCGGCATTGCCCAGGTGAGCGGCCCTCCCT 752596663 434368 NM_172369.4(C1QC):c.490G>A (p.Gly164Ser) C1QC Oct 18, 2017 MedGen:C3150902,OMIM:613652 C1q deficiency germline 1 22647535 AGCACTGGCAAGTTCACCTGCAAAGTCCCCGGCCTCTACTACTTTGTCTACCACGCGTCGC -1 470914 NM_000044.4(AR):c.2296G>A (p.Ala766Thr) AR May 30, 2017 MedGen:C0039585,OMIM:300068,SNOMED CT:12313004 Androgen resistance syndrome germline X 67717600 ACCAATGTCAACTCCAGGATGCTCTACTTCGCCCCTGATCTGGTTTTCAATGAGTAAGTGC -1 464504 NM_003239.4(TGFB3):c.989G>A (p.Trp330Ter) TGFB3 Jun 19, 2017 MedGen:C3553762,OMIM:614816 Loeys-Dietz syndrome 4 germline 14 75961014 TCTACATTGACTTCCGACAGGATCTGGGCTGGAAGTGGGTCCATGAACCTAAGGGCTACTA 879254907 246162 NM_000527.4(LDLR):c.1449G>A (p.Trp483Ter) LDLR Dec 16, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11113625 CCAGGCCCCCGACGGGCTGGCTGTGGACTGGATCCACAGCAACATCTACTGGACCGACTCT 863224004 210669 NM_000143.3(FH):c.1097G>A (p.Ser366Asn) FH Jul 31, 2017 MedGen:C0342770,OMIM:606812,Orphanet:ORPHA24,SNOMED CT:237983002;MedGen:CN517202 Fumarase deficiency;not provided germline 1 241504053 TGATCTTGCCTGAAAATGAACCAGGAAGCAGTATCATGCCAGGTAATCACATAGCTAGTAA 886041189 264135 NM_000094.3(COL7A1):c.6769G>A (p.Gly2257Arg) COL7A1 Mar 01, 2016 MedGen:CN517202 not provided germline 3 48572924 CTTCCCTCTCAGGGGGAGACAGGGAAGCCGGGAGCCCCAGGTCGAGATGGTGCCAGTGGAA 74339576 23722 NM_000525.3(KCNJ11):c.902G>A (p.Arg301His) KCNJ11 Feb 01, 2005 MedGen:C0027773,OMIM:601820,SNOMED CT:42681006 Islet cell hyperplasia germline 11 17387190 TGGAAACCACGGGCATCACCACCCAGGCCCGCACCTCCTACCTGGCCGATGAGATCCTGTG 104894066 16215 NM_000497.3(CYP11B1):c.347G>A (p.Trp116Ter) CYP11B1 Dec 01, 1993 MedGen:C0268292,OMIM:202010,Orphanet:ORPHA90795,SNOMED CT:124214007 Deficiency of steroid 11-beta-monooxygenase germline 8 142879080 TGCATCCCCACAGGATGAGCCTGGAGCCCTGGGTGGCCTACAGACAACATCGTGGGCACAA 61754393 18821 NM_000372.4(TYR):c.1265G>A (p.Arg422Gln) TYR Jul 01, 1991 MedGen:C1847132,Orphanet:ORPHA352737;MedGen:CN517202 Oculocutaneous albinism type 1, temperature sensitive;not provided germline 11 89284853 CAGAAGCCAATGCACCCATTGGACATAACCGGGAATCCTACATGGTTCCTTTTATACCACT 397518041 57773 NM_206933.2(USH2A):c.8981G>A (p.Trp2994Ter) USH2A Jan 01, 2015 Human Phenotype Ontology:HP:0000547,MeSH:D012174,MedGen:C0035334,OMIM:268000,Orphanet:ORPHA791,SNOMED CT:28835009;MedGen:C1848634,OMIM:276901 Retinitis pigmentosa;Usher syndrome, type 2A germline;unknown 1 215845898 TTGGCCACCTAAAGCCAAACACAGAGTATTGGATCTTTATCTCTGTCTTCAATGGAGTCCA 397507518 48977 NM_002834.4(PTPN11):c.328G>A (p.Glu110Lys) PTPN11 Mar 14, 2016 MeSH:D009634,MedGen:C0028326,Orphanet:ORPHA648,SNOMED CT:205824006;MedGen:C1860991,OMIM:609942;MedGen:CN517202 Noonan syndrome;Noonan syndrome 3;not provided germline 12 112450508 TATCCTCTGAACTGTGCAGATCCTACCTCTGAAAGGTCAGTAACATTTTAGTGACCACAAA 104894395 186860 NM_004004.5(GJB2):c.230G>A (p.Trp77Ter) GJB2 Feb 25, 2016 MedGen:C2673759,OMIM:220290;MedGen:CN043648,Orphanet:ORPHA87884 Deafness, autosomal recessive 1A;Nonsyndromic hearing loss and deafness germline;unknown 13 20189352 ACTACTTCCCCATCTCCCACATCCGGCTATGGGCCCTGCAGCTGATCTTCGTGTCCACGCC 794728533 197493 NM_000218.2(KCNQ1):c.1660G>A (p.Val554Met) KCNQ1 Apr 16, 2013 MedGen:CN517202 not provided germline 11 2776029 CAGTACTCGCAGGGCCACCTCAACCTCATGGTGCGCATCAAGGAGCTGCAGAGGAGGTGGG 121913283 173901 NM_006218.3(PIK3CA):c.3129G>A (p.Met1043Ile) PIK3CA May 31, 2016 MedGen:C0278701;MeSH:D003528,MedGen:C0010606;MeSH:D015179,MedGen:CN236642;Human Phenotype Ontology:HP:0100843,MeSH:D005909,MedGen:C0017636,SNOMED CT:63634009;MedGen:C0153574,Orphanet:ORPHA213569;Human Phenotype Ontology:HP:0030692,MeSH:D001932,MedGen:C0006118,SNOMED CT:126952004;Human Phenotype Ontology:HP:0100013,MeSH:D001943,MedGen:C1458155,Orphanet:ORPHA180250,SNOMED CT:126926005;Human Phenotype Ontology:HP:0100031,MeSH:D013964,MedGen:C0040136,Orphanet:ORPHA100087;Human Phenotype Ontology:HP:0030358,MeSH:D002289,MedGen:C0007131,SNOMED CT:254637007;MedGen:CN233161;Human Phenotype Ontology:HP:0006725,MedGen:C0281361;MeSH:C535575,MedGen:C1168401,OMIM:275355,Orphanet:ORPHA67037;Human Phenotype Ontology:HP:0006740,MedGen:C0279680 Adenocarcinoma of stomach;Adenoid cystic carcinoma;Colorectal Neoplasms;Glioblastoma;Malignant neoplasm of body of uterus;Neoplasm of brain;Neoplasm of the breast;Neoplasm of the thyroid gland;Non-small cell lung cancer;PIK3CA related overgrowth spectrum;Pancreatic adenocarcinoma;Squamous cell carcinoma of the head and neck;Transitional cell carcinoma of the bladder somatic 3 179234286 AGAGGCTTTGGAGTATTTCATGAAACAAATGAATGATGCACATCATGGTGGCTGGACAACA 587776837 31415 NM_021870.2(FGG):c.78+5G>A FGG Oct 01, 2000 MedGen:C2584774,OMIM:202400,Orphanet:ORPHA98880 Afibrinogenemia, congenital germline 4 154612527 TATTTCTCTCTTCAACATGTGTAGCAGTAAGTGTGCTCTTCACAAAACGTTGTTTAAAATG 193929392 34296 NM_005333.4(HCCS):c.475G>A (p.Glu159Lys) HCCS Aug 18, 2011 MedGen:C0796070,OMIM:309801 Linear skin defects with multiple congenital anomalies 1 not provided X 11118574 AATATCATTAGAATTCACAATCAGAATAACGAGCAGGCTTGGAAGGAGATTTTGAAGTGGG 36001797 28172 NM_000536.3(RAG2):c.283G>A (p.Gly95Arg) RAG2 Aug 01, 2000 MedGen:C1801959,OMIM:603554,Orphanet:ORPHA39041,SNOMED CT:307650006 Histiocytic medullary reticulosis germline 11 36593886 GAGTCTGAAAAGCATCAATACATCATCCATGGAGGGAAAACACCAAACAATGAGGTTTCAG 876658672 235944 NM_007294.3(BRCA1):c.5135G>A (p.Trp1712Ter) BRCA1 Apr 27, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 1;Hereditary cancer-predisposing syndrome germline 17 43063891 AATATTTTCTAGGAATTGCGGGAGGAAAATGGGTAGTTAGCTATTTCTGTAAGTATAATAC -1 482230 NM_000381.3(MID1):c.756+5G>A MID1 Dec 08, 2017 MedGen:CN517202 not provided germline X 10523087 TCATCCAAACCTGTCAACATGTTGAAGTGAGTATCTCTGTATTTCTGTATGGTATGTTTCA 28937593 21079 NM_004273.4(CHST3):c.911G>A (p.Arg304Gln) CHST3 Jul 06, 2004 MedGen:C1840471,OMIM:143095 Spondyloepiphyseal dysplasia with congenital joint dislocations germline 10 72007942 TGCGCGTCATCCAGCTGGTGCGCGACCCCCGGGCCGTGCTGGCCTCGCGCATGGTGGCCTT 62516101 15658 NM_000277.2(PAH):c.1162G>A (p.Val388Met) PAH Jun 14, 2017 MedGen:C0031485,OMIM:261600,Orphanet:ORPHA716,SNOMED CT:154735006;MedGen:CN517202 Phenylketonuria;not provided germline;unknown 12 102843683 ACTGTCACGGAGTTCCAGCCCCTCTATTACGTGGCAGAGAGTTTTAATGATGCCAAGGAGA 759877008 402204 NM_000135.2(FANCA):c.709+5G>A FANCA Jul 11, 2016 MedGen:C0015625,Orphanet:ORPHA84,SNOMED CT:30575002 Fanconi anemia germline 16 89805275 TGACGTCGCCAGGGCCATGCTTTCTGGTGCGTTCATGACAAGATGCGGGTTCTTGGGTAAA -1 29477 NM_172057.2(KCNH2):c.1572+1G>A KCNH2 Mar 23, 1999 MedGen:C3150944 Long QT syndrome 1/2, digenic germline 7 150948855 AGCCTGGAGATCACCTTCAACCTGCGAGATGTGAGTTGGCTGCCCTGAGCTGGACCCCATC 1064793563 408743 NM_001131025.1(PEX5):c.552-1G>A PEX5 May 07, 2015 MedGen:CN517202 not provided germline 12 7201750 AATGTGTAAAATTAGTTCTTACCCGTTCCAGGTATGATGAATATCATCCTGAGGAGGATCT 202247818 47486 NM_000532.4(PCCB):c.335G>A (p.Gly112Asp) PCCB May 17, 2012 Human Phenotype Ontology:HP:0003353,MedGen:C0268579,OMIM:606054,Orphanet:ORPHA35 Propionic acidemia not provided 3 136256586 TTCCTGGAGACAGCGTGGTCACTGGACGAGGCCGAATCAATGGAAGATTGGTTTATGTCTT 104894153 16841 NM_000102.3(CYP17A1):c.287G>A (p.Arg96Gln) CYP17A1 Jun 01, 2006 MedGen:CN042980 Complete combined 17-alpha-hydroxylase/17,20-lyase deficiency germline 10 102837075 TTATTAAGAAGGGCAAGGACTTCTCTGGGCGGCCTCAAATGGTAAGTGGTGCCCATCTCCT 267606708 28849 NM_005188.3(CBL):c.1259G>A (p.Arg420Gln) CBL Dec 09, 2016 MedGen:C3150803,OMIM:613563,Orphanet:ORPHA363972;MedGen:CN517202 Noonan syndrome-like disorder with or without juvenile myelomonocytic leukemia;not provided germline 11 119278541 AATCAGAAGGTCAGGGCTGTCCTTTCTGCCGATGTGAAATTAAAGGTACTGAACCCATCGT 587777534 150120 NM_001814.5(CTSC):c.815G>A (p.Arg272His) CTSC Mar 01, 2004 MedGen:C0031106,OMIM:170650 Periodontitis, aggressive, 1 germline 11 88296207 CTTCTATGGGTATGCTAGAAGCGAGAATCCGTATACTAACCAACAATTCTCAGACCCCAAT 113993979 34180 NM_002863.4(PYGL):c.1366G>A (p.Val456Met) PYGL May 17, 2011 MedGen:C0017925,OMIM:232700,Orphanet:ORPHA369,SNOMED CT:237971004,SNOMED CT:29291001 Glycogen storage disease, type VI not provided 14 50915373 TGCATTGTCGGTTCCCATGCTGTGAATGGCGTGGCTAAAATCCACTCAGACATCGTGAAGA 777828000 204411 NM_000050.4(ASS1):c.571G>A (p.Glu191Lys) ASS1 May 25, 2014 MedGen:C0175683,OMIM:215700,Orphanet:ORPHA187 Citrullinemia type I inherited 9 130471489 CCCTGTCTTTCCTTTCCCCTCCGCAGCTACGAGGCTGGAATCCTGGAGAACCCCAAGGTAA 769405586 426948 NM_001171.5(ABCC6):c.2279G>A (p.Arg760Gln) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16178934 GCATGAATCTCTCCGGAGGCCAGAAGCAGCGGCTGAGCCTGGCCCGGGCTGTATACAGAAA 104886118 35757 NM_000495.4(COL4A5):c.1481G>A (p.Gly494Asp) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108595566 GCATTGGAACTGGTATTTCAGGGCCTCCAGGTCAACCTGGTTTGCCAGGTCTCCCAGGTCC 1060502576 392288 NM_001204.6(BMPR2):c.1398G>A (p.Trp466Ter) BMPR2 Oct 16, 2016 MedGen:C0152171,OMIM:178600,SNOMED CT:26174007 Primary pulmonary hypertension germline 2 202542432 AAAACAGAGACCCAAGTTCCCAGAAGCCTGGAAAGAAAATAGCCTGGTAAGAAAAAACTAA 72556299 103146 NM_000531.5(OTC):c.578G>A (p.Trp193Ter) OTC - MedGen:CN517202 not provided unknown X 38403655 ATAGCTCTCTGAAAGGTCTTACCCTCAGCTGGATCGGGGATGGGAACAATATCCTGCACTC 189261858 227362 NM_000369.2(TSHR):c.1349G>A (p.Arg450His) TSHR Mar 18, 2016 MedGen:C3493776,OMIM:275200;MedGen:CN517202 Hypothyroidism, congenital, nongoitrous, 1;not provided germline 14 81143407 TCACCAGCCACTACAAACTGAACGTCCCCCGCTTTCTCATGTGCAACCTGGCCTTTGCGGA 398124476 102273 NM_138694.3(PKHD1):c.1602+1G>A PKHD1 Nov 01, 2012 MedGen:C0085548,OMIM:263200,Orphanet:ORPHA731,SNOMED CT:28770003 Autosomal recessive polycystic kidney disease germline 6 52056889 CCAATCCCTGCAAATGCCACAGCCCATCTGGTGGGAGACTTCTTCAAAAAATGAGGGAGGG -1 440410 NM_000530.7(MPZ):c.67+1G>A MPZ Dec 28, 2016 MedGen:CN517202 not provided germline 1 161309838 TCCTGGCTGTGCTGCTCTTCTCTTCTTTGGGTAAGTGGAGCCACTCTACTCTGGGAGTCTT 397508200 67910 NM_000492.3(CFTR):c.1393-1G>A CFTR Apr 08, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008;MedGen:CN517202;MedGen:CN169374 Cystic fibrosis;not provided;not specified germline 7 117559463 ATGACCTAATAATGATGGGTTTTATTTCCAGACTTCACTTCTAATGGTGATTATGGGAGAA 866001342 224768 NM_001257988.1(TYMP):c.856G>A (p.Glu286Lys) TYMP Jan 14, 2016 MedGen:C0872218,OMIM:603041,Orphanet:ORPHA298 Mitochondrial DNA depletion syndrome 1 (MNGIE type) germline 22 50526648 CCCCTGGGTCGCTGCGTGGGCCACGCCCTGGAGGTGGAGGAGGCGCTGCTCTGCATGGACG 886041857 264594 NM_001271.3(CHD2):c.1481G>A (p.Trp494Ter) CHD2 Jul 08, 2016 MedGen:CN517202 not provided germline 15 92949055 TTCGAGATTATCAGCTAGAAGGTCTAAACTGGCTAGCTCATTCCTGGTGCAAGTAGGTAGA 876658409 235486 NM_144997.5(FLCN):c.557G>A (p.Trp186Ter) FLCN Apr 17, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0346010,OMIM:135150,Orphanet:ORPHA122,SNOMED CT:110985001;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Multiple fibrofolliculomas;not provided germline 17 17223983 TGATGGACCGGATCTACCTCATCAACTCCTGGCCCTTCCTGCTGGGGAAGGTCCGGGGAAT -1 464927 NM_000138.4(FBN1):c.4043G>A (p.Cys1348Tyr) FBN1 Aug 16, 2017 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:CN118826,Orphanet:ORPHA91387 Marfan syndrome;Thoracic aortic aneurysm and aortic dissection germline 15 48474572 TATGTACCAATACAGCAGGAAGCTTCAAATGTAGCTGCAGTCCCGGGTGGATTGGAGATGG 72547564 16678 NM_000382.2(ALDH3A2):c.641G>A (p.Cys214Tyr) ALDH3A2 Jan 01, 1996 MedGen:C0037231,OMIM:270200,Orphanet:ORPHA816,SNOMED CT:111303009 Sjögren-Larsson syndrome germline 17 19656535 TGACTCTTGAACTGGGAGGGAAAAGTCCATGTTATATTGATAAAGATTGTGACCTGGACAT 281874664 35738 NM_000495.4(COL4A5):c.1294G>A (p.Gly432Arg) COL4A5 Aug 22, 2017 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917;MedGen:CN517202 Alport syndrome, X-linked recessive;not provided germline X 108591186 CCTGGACTTGACGGACAGCCTGGGGCTCCTGGGCTTCCAGGGCCTCCTGGCCCTGCTGGCC -1 423241 NM_000051.3(ATM):c.6312G>A (p.Trp2104Ter) ATM - Human Phenotype Ontology:HP:0100013,MeSH:D001943,MedGen:C1458155,Orphanet:ORPHA180250,SNOMED CT:126926005 Neoplasm of the breast germline 11 108317486 ACTAGAAGAACTTCATTACCAAGCAGCATGGAGGAATATGCAGTGGGACCATTGCACTTCC 147611168 177296 NM_000159.3(GCDH):c.1240G>A (p.Glu414Lys) GCDH Oct 13, 2016 MedGen:C0268595,OMIM:231670,Orphanet:ORPHA25,SNOMED CT:360416003,SNOMED CT:76175005 Glutaric aciduria, type 1 germline 19 12897860 GCCATGAACCTGGAGGCCGTGAACACCTACGAAGGTAGGAGCTGGACCTCAGAGGGCTCAC 397514481 40316 NM_000933.3(PLCB4):c.1862G>A (p.Arg621His) PLCB4 Mar 01, 2013 Gene:100381211,MedGen:C1865295,OMIM:602483;MedGen:C3553404,OMIM:614669 Auriculocondylar syndrome 1;Auriculocondylar syndrome 2 germline;inherited 20 9409080 GTTACAGTTATAACAAACGGCAAATGAGTCGCATTTACCCCAAGGGAGGCCGAGTCGATTC 1057517960 360601 NM_004006.2(DMD):c.1602+1G>A DMD Nov 18, 2016 MedGen:CN517202 not provided germline X 32595756 GCAACTGCTGCTTTGGAAGAACAACTTAAGGTCAGATTATTTTGCTTAGTAAACTAAATAT -1 442405 NM_000444.5(PHEX):c.187+1G>A PHEX Oct 25, 2016 MedGen:CN517202 not provided germline X 22038538 ACTGCCTGAAGCCAGAATGCATCGAAGCGGGTAAGTCACAGTTTTCCATCCTGTGTCAAGT 121913617 29177 NM_002470.3(MYH3):c.2015G>A (p.Arg672His) MYH3 May 01, 2006 MedGen:C0265224,OMIM:193700,SNOMED CT:52616002 Freeman-Sheldon syndrome germline 17 10641317 ATTTAAGAACTACTCACCCTCATTTTGTGCGTTGTATAATTCCCAATGAAACCAAAACTCC 397514581 48359 NM_172107.3(KCNQ2):c.638G>A (p.Arg213Gln) KCNQ2 Dec 06, 2016 MedGen:C3150986,OMIM:613720,Orphanet:ORPHA439218;MedGen:CN517202 Early infantile epileptic encephalopathy 7;not provided germline 20 63444711 TGCAGATTCTGCGGATGATCCGCATGGACCGGCGGGGAGGCACCTGGAAGCTGCTGGGCTC 876657717 228932 NM_181457.3(PAX3):c.668G>A (p.Arg223Gln) PAX3 Jun 23, 2015 MedGen:C3266898,Orphanet:ORPHA3440,SNOMED CT:47434006 Waardenburg syndrome germline 2 222232202 TACCACTAAAGAGGAAACAGCGCAGAAGCCGAACCACCTTCACAGCAGAACAGCTGGAGGA 755389753 246219 NM_000527.4(LDLR):c.1586+1G>A LDLR Dec 16, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11113763 AAGGGCCATCGTGGTGGATCCTGTTCATGGGTGCGTATCCACGACGCTGAGGGCTGCAGAG 121908841 21573 NM_003722.4(TP63):c.1028G>A (p.Arg343Gln) TP63 May 02, 2016 MedGen:C1858562,OMIM:604292;MedGen:CN517202 Ectrodactyly, ectodermal dysplasia, and cleft lip/palate syndrome 3;not provided germline 3 189868615 AAGTCCTGGGCCGACGCTGCTTTGAGGCCCGGATCTGTGCTTGCCCAGGAAGAGACAGGAA 281865012 46983 NM_024312.4(GNPTAB):c.3249+1G>A GNPTAB May 10, 2012 MedGen:C2673377,OMIM:252500,Orphanet:ORPHA576 I cell disease not provided 12 101760029 ACTCAGGAATCCTACTATGATCCCAACCTGGTAAGTGGAATGGGTTACTTTTATGTACAAC 386834227 70799 NM_000130.4(F5):c.5392G>A (p.Glu1798Lys) F5 - MedGen:CN517202 not provided inherited 1 169529635 TCCCGAAGTTCTTGGAGACTCACATCCTCAGAAATGAAAAAATCCCATGAGTTTCACGGTA 121918274 17216 NM_022370.3(ROBO3):c.955G>A (p.Glu319Lys) ROBO3 Jun 04, 2004 MedGen:C1846496,OMIM:607313,Orphanet:ORPHA2744 Gaze palsy, familial horizontal, with progressive scoliosis germline 11 124870650 CACAGCCTTTGGATTGGGCATGTGAGTGCCGAAGATGAGGGAACGTACACCTGTGTGGCGG 121912835 32476 NM_000094.3(COL7A1):c.4556G>A (p.Gly1519Asp) COL7A1 Dec 01, 1998 MedGen:C1851573,OMIM:131705,Orphanet:ORPHA79411 Transient bullous dermolysis of the newborn germline 3 48582616 CAGGGGTTGCTGGACGTCCTGGAGCCAAGGGTCCTGAAGTGAGTCTGTGACTGTGGTGGGA 121909361 23675 NM_000163.4(GHR):c.184G>A (p.Glu62Lys) GHR Oct 26, 1995 MedGen:C1858656,OMIM:604271,OMIM:615925 Short stature, idiopathic, autosomal germline 5 42688937 AAATTCACCAAGTGCCGTTCACCTGAGCGAGAGACTTTTTCATGCCACTGGACAGATGAGG 886042417 266767 NM_015295.2(SMCHD1):c.3801+1G>A SMCHD1 Sep 10, 2015 Gene:2490,MedGen:C1834671,OMIM:158901 Facioscapulohumeral muscular dystrophy 2 germline 18 2743929 CTCCTTATAGACTGGCCAGAACTAAAGGAGGTAAGTCACTTCATGTCTTCACTGAAAGAAT 200788251 358466 NM_000018.3(ACADVL):c.865G>A (p.Gly289Arg) ACADVL Apr 27, 2017 MedGen:C3887523,OMIM:201475,Orphanet:ORPHA26793,SNOMED CT:237996001,SNOMED CT:237997005;MedGen:CN517202 Very long chain acyl-CoA dehydrogenase deficiency;not provided germline;unknown 17 7222289 ATCACAGCTTTTGTGGTGGAGAGGGGCTTCGGGGGCATTACCCAGTGAGTGAATTTGGGTT 121913613 29198 NM_005373.2(MPL):c.1473G>A (p.Trp491Ter) MPL Aug 01, 2000 MedGen:C1327915,OMIM:604498,Orphanet:ORPHA3319 Congenital amegakaryocytic thrombocytopenia germline 1 43349267 GAAGTCTGACCCTTTTTGTCTCCTAGCCTGGATCTCCTTGGTGACCGCTCTGCATCTAGTG 727503309 176599 NM_016239.3(MYO15A):c.5531+1G>A MYO15A Oct 17, 2014 MedGen:CN043648,Orphanet:ORPHA87884 Nonsyndromic hearing loss and deafness germline 17 18141144 GCGCCTGCCTTTCCAGGGGTTCATCGACAGGTATCTTGGTTACGGTAGTTCCTGAGCTCTA 769193201 214394 NM_001135822.1(FDPS):c.486+1G>A FDPS Jul 23, 2015 MedGen:C4225262,OMIM:616631 Porokeratosis 9, multiple types germline 1 155318292 TACCTGAACCTGATCGAGCTCTTCCTGCAGGTGTATTGCAGACAGGGCCCGATGCCCAGAG 121908641 21368 NM_000050.4(ASS1):c.1168G>A (p.Gly390Arg) ASS1 Oct 20, 2017 MedGen:C0175683,OMIM:215700,Orphanet:ORPHA187;MedGen:CN517202 Citrullinemia type I;not provided germline;unknown 9 130499545 CAGGGTGATTATGAGCCAACTGATGCCACCGGGTTCATCAACATCAATTCCCTCAGGTGAG 80358258 33990 NM_000271.4(NPC1):c.3160G>A (p.Ala1054Thr) NPC1 Jul 22, 2008 MedGen:C3179455,OMIM:257220 Niemann-Pick disease type C1 not provided 18 23536758 GTGCTGCAGACCTCTGCTGACTTTATTGACGCTCTGAAGAAAGCCCGACTTATAGCCAGTA 1057517650 359019 NM_006412.3(AGPAT2):c.182+1G>A AGPAT2 Dec 08, 2016 MedGen:C1720862,OMIM:608594 Congenital generalized lipodystrophy type 1 germline 9 136687175 CCACGGCGGCCGGACGGTGGAGAACATGAGGCAAGGCCGGGGGCCGCCGGGAGGGGCCGGG 587777096 102947 NM_052844.3(WDR34):c.1177G>A (p.Gly393Ser) WDR34 Jun 01, 2017 MedGen:C0265275,Orphanet:ORPHA474,SNOMED CT:75049004;MedGen:C3810200,OMIM:615633 Jeune thoracic dystrophy;Short-rib thoracic dysplasia 11 with or without polydactyly germline;inherited 9 128634726 CCAGCACAGTTTACCTTCTCCCCCCACGGCGGTCCCATCTACTCTGTGAGCTGTTCCCCCT -1 440675 NM_000091.4(COL4A3):c.637G>A (p.Gly213Arg) COL4A3 Aug 19, 2016 MedGen:CN517202 not provided germline 2 227251363 TAGGGCTTTCCAGGAGCCATGGGACCTAGAGGACCTAAGGTAGACTACAGTTCATATGATG 587779720 107240 NM_000090.3(COL3A1):c.3410G>A (p.Gly1137Asp) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189007931 AGGGTGCAATCGGCAGTCCAGGACCTGCAGGCCCCAGAGTAAGTAGCACAGAAAGATATTA 111033565 26915 NM_002769.4(PRSS1):c.365G>A (p.Arg122His) PRSS1 Jul 11, 2017 MedGen:C0238339,OMIM:167800,Orphanet:ORPHA676,SNOMED CT:68072000;MedGen:CN517202;MedGen:CN169374 Hereditary pancreatitis;not provided;not specified germline 7 142751938 AGCTCTCCTCACGTGCAGTAATCAACGCCCGCGTGTCCACCATCTCTCTGCCCACCGCCCC 151344525 33505 NM_001042425.1(TFAP2A):c.698G>A (p.Arg233Gln) TFAP2A Apr 01, 2010 MedGen:C0376524,OMIM:113620 Branchiooculofacial syndrome germline 6 10404562 ACAAGGTCACGGTGGCGGAAGTGCAGCGGCGGCTCTCACCACCCGAGTGTCTCAACGCGTC 763797356 371313 NM_033056.3(PCDH15):c.1997+1G>A PCDH15 May 14, 2015 MedGen:CN517202 not provided germline 10 54089983 TCCTCAGAGAGTTTTTAATCTTTCAGAAACGTAAGTTAAAAATGATTTCCTACTTTAAAAA 104893732 20976 NM_006580.3(CLDN16):c.350G>A (p.Trp117Ter) CLDN16 Jun 01, 2000 MedGen:C0268448,OMIM:248250,Orphanet:ORPHA31043,SNOMED CT:80710001 Primary hypomagnesemia germline 3 190402362 TCTAGGTGAGCACAAAATGCCGAGGCCTCTGGTGGGAATGCGTCACAAATGCTTTTGATGG 121912614 16455 NM_001041.3(SI):c.3686G>A (p.Cys1229Tyr) SI Jan 01, 2006 MedGen:C1283620,OMIM:222900,Orphanet:ORPHA35122,SNOMED CT:360854006,SNOMED CT:78373000 Sucrase-isomaltase deficiency germline 3 165017621 CAGCTTATTGGGCTTTGGGATTCCAATTATGTCGTTATGGATATGCAAATACTTCAGAGGT 1010078101 374885 NM_000382.2(ALDH3A2):c.1202G>A (p.Gly401Glu) ALDH3A2 Apr 15, 2015 MedGen:CN517202 not provided germline 17 19665042 ACTTCACGCTCAACTCTTTCCCATTTGGAGGAGTGGGTGAGTCTTATTTTCTCCTGCTTGT 121912914 32240 NM_000090.3(COL3A1):c.3149G>A (p.Gly1050Asp) COL3A1 Dec 21, 2017 MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189006400 CTGGTGCCCCTGGCGCTCCTGGTCATCCAGGCCCACCTGGTCCTGTCGGTCCAGCTGGAAA -1 434204 NM_000527.4(LDLR):c.263G>A (p.Arg88Lys) LDLR - MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11102736 GTGTCAACCGCTGCATTCCTCAGTTCTGGAGGTGCGATGGCCAAGTGGACTGCGACAACGG -1 428727 NM_000162.3(GCK):c.775G>A (p.Ala259Thr) GCK Jan 11, 2017 MedGen:C1841962,OMIM:125851 Maturity-onset diabetes of the young, type 2 germline 7 44147738 GGCCGCATGTGCGTCAATACCGAGTGGGGCGCCTTCGGGGACTCCGGCGAGCTGGACGAGT 113993981 27035 NM_002863.4(PYGL):c.1620+1G>A PYGL May 17, 2011 MedGen:C0017925,OMIM:232700,Orphanet:ORPHA369,SNOMED CT:237971004,SNOMED CT:29291001 Glycogen storage disease, type VI germline 14 50913028 TTCCTCCGGGAACTCGCCAAGGTGAAGCAGGTGAGCCTTCCAGGTGTGGGTCCCCTCCTGG 483352809 65656 NM_006087.3(TUBB4A):c.745G>A (p.Asp249Asn) TUBB4A Jul 05, 2016 MedGen:C2676244,OMIM:612438,Orphanet:ORPHA139441;MedGen:CN517202 Leukodystrophy, hypomyelinating, 6;not provided germline;unknown 19 6495754 TGCCTGCGCTTCCCGGGCCAGCTGAACGCCGACCTGCGCAAGCTGGCCGTCAACATGGTTC 1060499708 384502 NM_003647.2(DGKE):c.1376G>A (p.Trp459Ter) DGKE - MedGen:C3554330,OMIM:615008 Nephrotic syndrome, type 7 germline 17 56861882 TCGGATACTGGGGCGGTGGCTGCAGACTATGGGAAGGGATGGGGGACGAGACTTACCCTCT 386834008 20285 NM_015294.4(TRIM37):c.860G>A (p.Ser287Asn) TRIM37 Dec 01, 2006 MedGen:C0524582,OMIM:253250,Orphanet:ORPHA2576,SNOMED CT:81604003 Mulibrey nanism syndrome germline 17 59064355 ATTCAGCTACTTTTGTTTTAGAGAATTTCAGGTAAGAGTTTTTGACAATTCTGGTTTTTTT -1 471869 NM_004006.2(DMD):c.831+1G>A DMD Jul 11, 2017 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Duchenne muscular dystrophy germline X 32699111 TTACATCATCAAATGCACTATTCTCAACAGGTAAAGTGTGTAAAGGACAGCTACTATTCAA 794726853 187759 NM_001165963.1(SCN1A):c.3858G>A (p.Trp1286Ter) SCN1A Dec 20, 2014 MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002 Severe myoclonic epilepsy in infancy de novo 2 166012130 TCAAACATATTTCACCAATGCCTGGTGTTGGCTGGACTTCTTAATTGTTGATGTAGGTATC 121912529 29437 NM_000233.3(LHCGR):c.1060G>A (p.Glu354Lys) LHCGR Jun 01, 1998 MedGen:C0266432,OMIM:238320,SNOMED CT:56212008;MedGen:C2673498 Leydig cell agenesis;Luteinizing hormone resistance, female germline 2 48688737 GCTCCTGAACCAGATGCTTTTAATCCCTGTGAAGATATTATGGGCTATGACTTCCTTAGGG 104894386 17606 NM_006493.2(CLN5):c.335G>A (p.Arg112His) CLN5 Feb 22, 2005 MedGen:C1850442,OMIM:256731,Orphanet:ORPHA228360 Ceroid lipofuscinosis neuronal 5 germline 13 76995077 TCTTTTTCTTTATTAGGCGCTTTGACTTCCGTCCAAAACCTGATCCTTATTGTCAAGCTAA -1 452457 NM_198056.2(SCN5A):c.1121G>A (p.Trp374Ter) SCN5A Mar 09, 2017 MedGen:C1142166,Orphanet:ORPHA130,SNOMED CT:418818005 Brugada syndrome germline 3 38606688 CACTCTTCCGCCTGATGACGCAGGACTGCTGGGAGCGCCTCTATCAGCAGGTGTGTGTGTG 886043251 270158 NM_004006.2(DMD):c.1150-1G>A DMD Jan 16, 2018 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001;MedGen:CN517202 Duchenne muscular dystrophy;not provided germline X 32644314 AATTACAATTGTTAACTTCCTTCTTTGTCAGGGGTACATGATGGATTTGACAGCCCATCAG 761283105 211189 NM_032380.4(GFM2):c.569G>A (p.Arg190Gln) GFM2 Sep 15, 2017 MedGen:C0751651,Orphanet:ORPHA68380;MedGen:CN517202 Mitochondrial diseases;not provided germline 5 74747731 GGAGGCAAGCTGATAAACACAATATACCTCGAATCTGTTTTTTAAACAAGATGGACAAAAC 1057520644 379505 NM_000206.2(IL2RG):c.202G>A (p.Glu68Lys) IL2RG Apr 15, 2015 MedGen:CN517202 not provided germline X 71110964 CCAGAGGTTCAGTGTTTTGTGTTCAATGTCGAGTACATGAATTGCACTTGGAACAGCAGCT 876658153 407985 NM_000314.6(PTEN):c.209+1G>A PTEN Oct 04, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline 10 87925558 GCATAAAAACCATTACAAGATATACAATCTGTAAGTATGTTTTCTTATTTGTATGCTTGCA 5030808 17276 NM_000551.3(VHL):c.277G>A (p.Gly93Ser) VHL Feb 26, 2016 Human Phenotype Ontology:HP:0002666,MedGen:C0031511,OMIM:171300;MedGen:C0019562,OMIM:193300,Orphanet:ORPHA892,SNOMED CT:46659004 Pheochromocytoma;Von Hippel-Lindau syndrome germline 3 10142124 GTCGTGCTGCCCGTATGGCTCAACTTCGACGGCGAGCCGCAGCCCTACCCAACGCTGCCGC 373885654 172174 NM_000535.6(PMS2):c.1144+1G>A PMS2 Mar 20, 2017 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:CN517202 Lynch syndrome;not provided germline 7 5989799 TCAGTCAGCAGCCACTGCTGGATGTTGAAGGTAAGAAAAATACAGTGTACAAACAGCTTCT 397507175 46836 NM_000060.4(BTD):c.734G>A (p.Cys245Tyr) BTD Mar 17, 2015 MedGen:C0220754,OMIM:253260,Orphanet:ORPHA79241,SNOMED CT:8808004 Biotinidase deficiency germline 3 15644590 CCTTTGCTGGCAGGTTTGGCATCTTCACATGCTTTGATATATTGTTCTTTGACCCTGCCAT 80338958 20939 NM_000334.4(SCN4A):c.3466G>A (p.Ala1156Thr) SCN4A Jan 28, 2016 MedGen:CN074266,OMIM:170500;MedGen:C1858891;MedGen:CN517202 Hyperkalemic Periodic Paralysis Type 1;Paramyotonia congenita/hyperkalemic periodic paralysis;not provided germline 17 63945614 CCCCAGGTGGTGGTGAACGCCCTCCTAGGCGCCATCCCCTCCATCATGAATGTGCTGCTTG 281874763 35657 NM_000495.4(COL4A5):c.689G>A (p.Gly230Asp) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108578292 ACCACTGTCTTATTTTATCTTGCAAACAGGGTGAGCAAGGTCTTCAGGGCCCACCTGGGCC 775565634 362055 NM_005215.3(DCC):c.2260G>A (p.Val754Met) DCC Jan 01, 2016 MedGen:C0175754,OMIM:217990,Orphanet:ORPHA200 Corpus callosum agenesis germline 18 53339808 AGTTGGACTCCTCCCTTGAACCCAAACATCGTGGTGCGAGGTTATATTATCGGTTATGGCG 368435864 202925 NM_002693.2(POLG):c.3287G>A (p.Arg1096His) POLG May 16, 2017 MedGen:C0205710,OMIM:203700,Orphanet:ORPHA726,SNOMED CT:20415001;MedGen:CN517202 Progressive sclerosing poliodystrophy;not provided germline 15 89318736 CCACCTTCCCTTCCCAGTTTATGACCAGCCGTGTGAATTGGGTGGTACAGAGCTCTGCTGT 387906499 26570 NM_003688.3(CASK):c.915G>A (p.Lys305=) CASK Sep 01, 2008 MedGen:C2677903,OMIM:300749,Orphanet:ORPHA163937 Mental retardation and microcephaly with pontine and cerebellar hypoplasia germline X 41636578 GAGGAAATTCAATGCAAGGAGGAAACTAAAGGTAAATTAAACAAATCAGCAAAAAAGCCAA 869025217 217242 NM_004423.3(DVL3):c.1715-1G>A DVL3 Apr 04, 2016 MedGen:C0265205,OMIM:180700,SNOMED CT:76520005;MedGen:C4225164,OMIM:616894 Robinow syndrome;Robinow syndrome, autosomal dominant 3 de novo;germline 3 184170318 GCCCCACCCCGGCCCTGTTTGCCTCCTACAGGCAGTCGGAGCAGTGGCTCCAACCGTAGCG 879254546 245591 NM_000527.4(LDLR):c.495G>A (p.Trp165Ter) LDLR Mar 25, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11105401 CAACAGCTCCACCTGCATCCCCCAGCTGTGGGCCTGCGACAACGACCCCGACTGCGAAGAT 797045351 209246 NM_000052.6(ATP7A):c.2187G>A (p.Trp729Ter) ATP7A Feb 08, 2013 MedGen:C0022716,OMIM:309400,Orphanet:ORPHA565,SNOMED CT:59178007 Menkes kinky-hair syndrome germline X 78012893 CATTCCTATATTGCAGTTTTTCGGAGGCTGGTACTTCTACATTCAGGCTTATAAAGCACTG 864309514 215041 NM_006516.2(SLC2A1):c.857G>A (p.Gly286Asp) SLC2A1 Nov 10, 2011 MedGen:C1837206,OMIM:608885,Orphanet:ORPHA168577 Stomatin-deficient cryohydrocytosis with neurologic defects germline 1 42929603 TGGTGCTGCAGCTGTCCCAGCAGCTGTCTGGCATCAACGCTGTGAGTGCCCCCACCCACCC 387907285 45788 NM_004984.3(KIF5A):c.751G>A (p.Glu251Lys) KIF5A Jun 27, 2017 MedGen:C0037772;MedGen:C1858712,OMIM:604187,Orphanet:ORPHA100991 Spastic paraplegia;Spastic paraplegia 10 germline 12 57568999 AAGACTGGAGCAGAGGGAGCCGTGCTGGACGAGGCAAAGAATATCAACAAGTCACTGTCAG 104893619 24519 NM_001298.2(CNGA3):c.1585G>A (p.Val529Met) CNGA3 May 04, 2016 MedGen:C1857618,OMIM:216900;MedGen:CN517202 Achromatopsia 2;not provided germline 2 98396755 ATGTACATCATCAACGAGGGCAAGCTGGCCGTGGTGGCTGATGATGGGGTCACCCAGTTCG 1057518200 359277 NM_001271208.1(NEB):c.17262G>A (p.Trp5754Ter) NEB Nov 08, 2016 MedGen:CN517202 not provided germline 2 151570249 ACGAGAGTACCGGCTGGACTGGGCCAAATGGAAGGCCAAGATCCAGAGCCCTGTGGACATG 1085307346 414300 NM_001204.6(BMPR2):c.1397G>A (p.W466*) BMPR2 - MedGen:C0152171,OMIM:178600,SNOMED CT:26174007 Primary pulmonary hypertension germline 2 202542431 AAAAACAGAGACCCAAGTTCCCAGAAGCCTGGAAAGAAAATAGCCTGGTAAGAAAAAACTA 80338714 26568 NM_000047.2(ARSE):c.1743G>A (p.Trp581Ter) ARSE May 22, 2017 MedGen:C1844853,OMIM:302950,Orphanet:ORPHA79345;MedGen:CN517202 Chondrodysplasia punctata 1, X-linked recessive;not provided germline X 2934859 GCCCTGCTGTGGCCCGTTCCCCCTCTGCTGGTGCCTTAGGGAAGATGACCCACAATAAATG 869312952 226934 NM_052867.3(NALCN):c.4197+1G>A NALCN Apr 17, 2014 MeSH:D030342,MedGen:C0950123 Inborn genetic diseases germline 13 101073583 GACTGGAACAAGATTATGCATGACTGTATGGTAAATATCTCTCATCATGAACAAGGCTTAG 121912744 32802 NM_000342.3(SLC4A1):c.1766G>A (p.Arg589His) SLC4A1 May 26, 1998 MedGen:C0259810,OMIM:179800 Renal tubular acidosis, distal, autosomal dominant germline 17 44255707 CCGGTACCTTCTTCTTTGCCATGATGCTGCGCAAGTTCAAGAACAGCTCCTATTTCCCTGG 376459828 198012 NM_000527.4(LDLR):c.590G>A (p.Cys197Tyr) LDLR May 01, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000;MedGen:CN118841 Familial hypercholesterolemia;Familial hypercholesterolemias germline 19 11105496 TTTACGTGTTCCAAGGGGACAGTAGCCCCTGCTCGGCCTTCGAGTTCCACTGCCTAAGTGG 207459999 24719 m.15242G>A MT-CYB Dec 01, 2000 MedGen:C0162666,SNOMED CT:447292006 Mitochondrial encephalomyopathy germline MT 15242 ATTGGGACAGACCTAGTTCAATGAATCTGAGGAGGCTACTCAGTAGACAGTCCCACCCTCA 1114167394 413989 NM_000088.3(COL1A1):c.2668-1G>A COL1A1 - MedGen:C0023931,OMIM:166200,SNOMED CT:385482004 Osteogenesis imperfecta type I unknown 17 50189539 GAGTCTGACAGCCCCTCCTATCCTCATCCAGGGAAATGCTGGACCCCCTGGCCCTCCTGGT 886039551 259758 NM_003242.5(TGFBR2):c.1336G>A (p.Asp446Asn) TGFBR2 Feb 09, 2016 MedGen:CN517202 not provided germline 3 30674186 TTGGAGAATGTTGAGTCCTTCAAGCAGACCGATGTCTACTCCATGGCTCTGGTGCTCTGGG 768410753 248706 NM_133171.4(ELMO2):c.1065+1G>A ELMO2 Sep 13, 2016 MedGen:C1847197,OMIM:606893,Orphanet:ORPHA140436 Vascular malformation, primary intraosseous germline 20 46375235 ACAAAGGACTACAAAATGCTGGGATTTACCGTAAGTACCTCAGAGCATAGACGGTGGTAGG 67561842 39293 NM_001171.5(ABCC6):c.2294G>A (p.Arg765Gln) ABCC6 Jan 01, 2010 MedGen:C3276161,OMIM:614473;MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Generalized arterial calcification of infancy 2;Pseudoxanthoma elasticum germline 16 16178919 GAGGCCAGAAGCAGCGGCTGAGCCTGGCCCGGGCTGTATACAGAAAGGCAGCTGTGTACCT 747068278 49919 NM_022173.2(TIA1):c.1150G>A (p.Glu384Lys) TIA1 Nov 01, 2017 MedGen:C0221054,OMIM:604454,SNOMED CT:58795000;MedGen:CN517202 Welander distal myopathy;not provided germline 2 70212730 CAGCCTTCTGGGTATCGAGTGGCAGGGTATGAAACCCAGTGAATAAGGACTCCAGAATCTA 267606738 17608 NM_006493.2(CLN5):c.377G>A (p.Cys126Tyr) CLN5 Feb 16, 2010 MedGen:C1850442,OMIM:256731,Orphanet:ORPHA228360 Ceroid lipofuscinosis neuronal 5 germline 13 76995119 ATCCTTATTGTCAAGCTAAGTATACTTTCTGTCCAACTGGCTCACCTATCCCAGTTATGGA 199422280 47896 NR_001566.1(TERC):n.322G>A TERC May 10, 2012 Human Phenotype Ontology:HP:0001915,MedGen:C0002874,OMIM:609135,SNOMED CT:306058006 Aplastic anemia not provided 3 169764739 GCCACCGCGAAGAGTTGGGCTCTGTCAGCCGCGGGTCTCTCGGGGGCGAGGGCGAGGTTCA 1060499798 389249 NM_016239.3(MYO15A):c.4240G>A (p.Glu1414Lys) MYO15A Jun 04, 2016 MedGen:C1838263,OMIM:600316 Deafness, autosomal recessive 3 germline 17 18132486 AAAAACGAGAGGAATTACCACATCTTCTACGAGTTGCTGGCCGGGTTGCCTGCCCAGCTCA 879255694 247711 NM_014191.3(SCN8A):c.641G>A (p.Gly214Asp) SCN8A Feb 19, 2016 MedGen:C3281191,OMIM:614558 Early infantile epileptic encephalopathy 13 germline 12 51688784 GCAGGTATATAACAGAGTTTGTAAACCTAGGCAATGTTTCAGCTCTACGCACTTTCAGGGT 121912741 32799 NM_000342.3(SLC4A1):c.2312G>A (p.Gly771Asp) SLC4A1 Dec 01, 1995 MedGen:C2675212,OMIM:612653 Spherocytosis type 4 germline 17 44251588 CTGGGCTGAGAGTGTGCGGCTCCCCCACAGGCCTGTCCATCCTCATGGAGCCCATCCTGTC 886041153 265103 NM_003688.3(CASK):c.429+1G>A CASK May 17, 2016 MedGen:CN517202 not provided germline X 41739383 GATAATAACATAATTCACAGGGATGTGAAGGTAAGTCATTTGTTATCACTAACTTTAATGT 587778805 76795 NM_000193.3(SHH):c.664G>A (p.Asp222Asn) SHH Aug 29, 2013 MedGen:C1840529,OMIM:142945 Holoprosencephaly 3 not provided 7 155803625 ACCAAGCTGGTGAAGGACCTGAGCCCCGGGGACCGCGTGCTGGCGGCGGACGACCAGGGCC 398122933 49381 NM_001242.4(CD27):c.24G>A (p.Trp8Ter) CD27 Mar 01, 2012 MedGen:C3554540,OMIM:615122 Lymphoproliferative syndrome 2 germline 12 6445119 AGGGACCATGGCACGGCCACATCCCTGGTGGCTGTGCGTTCTGGGGACCCTGGTGGGGCTC 794728858 196961 NM_198056.2(SCN5A):c.1891-1G>A SCN5A Sep 01, 2011 MedGen:CN517202 not provided germline 3 38599051 AGGCTGACGCAAATCTCCTGATTGCACTCAGACCACGCCATCGGAGGAGCCAGGCGGGCCC 879253785 244088 NM_000038.5(APC):c.-30416G>A APC Jul 24, 2017 MedGen:C2713442,OMIM:175100 Familial adenomatous polyposis 1 germline 5 112707528 GCATTGTAGTCTTCCCACCTCCCACAAGATGGCGGAGGGCAAGTAGCAAGGGGGCGGGGTG 587779714 107230 NM_000090.3(COL3A1):c.539G>A (p.Gly180Asp) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188988091 CATTCAAATTCACATTCCAGGGCCCCCCAGGCCCTCCCGGTCCCCCTGGTACATCTGGTCA -1 468836 NM_001022.3(RPS19):c.185G>A (p.Arg62Gln) RPS19 Feb 27, 2017 Human Phenotype Ontology:HP:0004810,MedGen:C1260899,Orphanet:ORPHA124,SNOMED CT:88854002 Diamond-Blackfan anemia germline 19 41869043 CTCTCACACTACCCCCAGCTTCCACAGCGCGGCACCTGTACCTCCGGGGTGGCGCTGGGGT 1060499714 384487 NM_022124.5(CDH23):c.1987-1G>A CDH23 - MedGen:C1832845,OMIM:601067 Usher syndrome, type 1D germline 10 71687646 GCCTCCTGCAACCTGTCTGTGTTCCTTCCAGGATGAGAATGACAACCCTCCCACCTTCAGC 587779418 106848 NM_000090.3(COL3A1):c.2276G>A (p.Gly759Asp) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188999888 CAGGTGCTGATGGTGTCCCAGGGAAAGATGGCCCAAGGGTGAGTATTCCCAGTGAGGAGAA 886037643 75133 NM_205850.2(SLC24A5):c.591G>A (p.Trp197Ter) SLC24A5 Jul 01, 2013 MedGen:CN514775 Albinism, oculocutaneous, type VI germline 15 48136683 AATTTAAAAACACAAATTTCTCTTTTGTAGGTATGAAGGGGCTTTACTGCTTTTGATATAT 118204117 16522 NM_000190.3(HMBS):c.849G>A (p.Trp283Ter) HMBS Apr 30, 2015 MedGen:C0162565,OMIM:176000,Orphanet:ORPHA79276,SNOMED CT:234422006;MedGen:CN517202 Acute intermittent porphyria;not provided germline 11 119092958 TCCCCAGCTGTACCTGACTGGAGGAGTCTGGAGTCTAGACGGCTCAGATAGCATACAAGAG -1 461455 NM_016725.2(FOLR1):c.257G>A (p.Trp86Ter) FOLR1 Aug 29, 2016 MedGen:C2751584,OMIM:613068,Orphanet:ORPHA217382 Cerebral folate deficiency germline 11 72195359 AGGATGTTTCCTACCTATATAGATTCAACTGGAACCACTGTGGAGAGATGGCACCTGCCTG 587779519 106964 NM_000090.3(COL3A1):c.2554-1G>A (p.Gly852Valfs*384) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189003410 TTCTTACATAATTTCCTTCCATTTCATATAGGGTCCTCCTGGTCCCCAAGGTGTCAAAGGT 80356780 24110 NM_001876.3(CPT1A):c.2129G>A (p.Gly710Glu) CPT1A May 09, 2016 MedGen:C0342789,OMIM:255120,SNOMED CT:238001003 Carnitine palmitoyltransferase I deficiency germline;unknown 11 68760238 AGAATAACCCAGAGTACGTGTCCAGCGGAGGGGGCTTTGGACCGGTGAGTGCGGCGGGGCT 867760244 444713 NM_000051.3(ATM):c.6327G>A (p.Trp2109Ter) ATM Apr 05, 2017 MedGen:CN517202 not provided germline 11 108317501 TTACCAAGCAGCATGGAGGAATATGCAGTGGGACCATTGCACTTCCGTCAGGTAAGAAATT 1057519468 362115 NM_000520.5(HEXA):c.1454G>A (p.Trp485Ter) HEXA Mar 24, 2012 MedGen:C0039373,OMIM:272800,Orphanet:ORPHA845,SNOMED CT:111385000 Tay-Sachs disease germline 15 72345518 CCAGAGCAGGGGCTGTTGCCGAAAGGCTGTGGAGCAACAAGTTGACATCTGACCTGACATT 180177323 200645 NM_012203.1(GRHPR):c.905G>A (p.Arg302His) GRHPR Nov 27, 2014 MedGen:C0268165,OMIM:260000,Orphanet:ORPHA93599,SNOMED CT:40951006 Primary hyperoxaluria, type II germline 9 37436700 CCCACATTGGCAGTGCCACCCACAGAACCCGCAACACCATGTCCTTGTTGGCAGCTAACAA 137853932 34284 NM_004750.4(CRLF1):c.397+1G>A CRLF1 Mar 03, 2011 MedGen:C1848947,OMIM:272430 Cold-induced sweating syndrome 1 not provided 19 18599564 TCCTGGCTGGCTCCTGCCTCTATGTTGGCCGTAAGTTGGCACCCAGGACACCCCAGGGGTA 587779495 106937 NM_000090.3(COL3A1):c.3437G>A (p.Gly1146Glu) COL3A1 May 23, 2016 MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189008054 TACTTTCTTAGGGACCTGTTGGACCCAGTGGACCTCCTGGCAAAGATGGAACCAGTGGACA 387907169 40277 NM_025237.2(SOST):c.61G>A (p.Val21Met) SOST May 01, 2011 MedGen:C2675746,OMIM:122860 Craniodiaphyseal dysplasia, autosomal dominant germline 17 43758681 TGCCTGCTGGTACACACAGCCTTCCGTGTAGTGGAGGGCCAGGGGTGGCAGGCGTTCAAGA 1064796939 410859 NM_001396.4(DYRK1A):c.517-1G>A DYRK1A Mar 15, 2017 MedGen:CN517202 not provided germline 21 37486466 GAAATAGAGAATTATTCATCTTCTCTTTTAGGTTGTAAAGGCATATGATCGTGTGGAGCAA 80358810 46556 NM_000059.3(BRCA2):c.582G>A (p.Trp194Ter) BRCA2 Oct 31, 2016 MedGen:C2675520,OMIM:612555;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 2;Hereditary cancer-predisposing syndrome germline 13 32326564 AGGAGCTGAGGTGGATCCTGATATGTCTTGGTCAAGTTCTTTAGCTACACCACCCACCCTT 137852403 25231 NM_000132.3(F8):c.902G>A (p.Arg301His) F8 Aug 19, 2016 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008;MedGen:CN517202 Hereditary factor VIII deficiency disease;not provided germline X 154969438 AAGGTCACACATTTCTTGTGAGGAACCATCGCCAGGCGTCCTTGGAAATCTCGCCAATAAC 80358063 46152 NM_007294.3(BRCA1):c.4484+1G>A BRCA1 Nov 01, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 1;Familial cancer of breast;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline 17 43076487 CAGTAAAAATAAAGAACCAGGAGTGGAAAGGTAAGAAACATCAATGTAAAGATGCTGTGGT 794729149 198207 NM_001134363.2(RBM20):c.1910G>A (p.Ser637Asn) RBM20 Sep 25, 2013 MedGen:CN517202 not provided germline 10 110812307 GATATGGCCCAGAAAGGCCGCGGTCTCGTAGTCCGGTGAGCCGGTCACTCTCCCCGAGGTC 886043249 270145 NM_018136.4(ASPM):c.8829G>A (p.Trp2943Ter) ASPM Jan 28, 2016 MedGen:C1837501,OMIM:608716 Primary autosomal recessive microcephaly 5 germline 1 197096156 GTTATATTTATGTATTTAATAGGCTATGTGGAGGAGATATAGAGCCAAGAAATATTTATGT 786204795 187137 NM_002240.4(KCNJ6):c.460G>A (p.Gly154Ser) KCNJ6 Feb 05, 2015 MedGen:C3279800,OMIM:614098,Orphanet:ORPHA435628 Keppen-Lubinsky syndrome germline 21 37714697 TTATTCTCAATAGAGACAGAAACCACCATTGGTTATGGCTACCGGGTCATCACAGATAAAT 121909767 21830 NM_001360.2(DHCR7):c.3G>A (p.Met1Ile) DHCR7 Jul 07, 2014 MedGen:C0175694,OMIM:270400,Orphanet:ORPHA818,SNOMED CT:43929004 Smith-Lemli-Opitz syndrome germline;unknown 11 71444950 AGCAAGGTTCTCTTTCTTGCAGGGCCCAATGGCTGCAAAATCGCAACCCAACATTCCCAAA 386833431 70589 NM_000027.3(AGA):c.677G>A (p.Gly226Asp) AGA Sep 30, 2016 Human Phenotype Ontology:HP:0012068,MedGen:C0268225,OMIM:208400;MedGen:CN517202 Aspartylglucosaminuria;not provided germline 4 177436297 GACATATTGCTGCTGGTACATCTACAAATGGTATAAAATTCAAAATACATGGGTTAGTGTT 181087667 40103 NM_007055.3(POLR3A):c.2617-1G>A POLR3A Jun 08, 2016 MedGen:C1843200,OMIM:607694;MedGen:CN517202 Hypomyelinating leukodystrophy 7;not provided germline 10 77993368 GCAGCTGAGCTTTTTCCTCCTTTTCCTTTAGCGAAGGCTTGTCAAATCTCTTGAAGATCTT 121964982 27014 NM_000481.3(AMT):c.139G>A (p.Gly47Arg) AMT Jun 01, 1994 Human Phenotype Ontology:HP:0008288,MedGen:C0751748,OMIM:605899,Orphanet:ORPHA407,SNOMED CT:237939006 Non-ketotic hyperglycinemia germline 3 49422223 CCGCTCTATGACTTCCACCTGGCCCACGGCGGGAAAATGGTGGCGTTTGCGGGTTGGAGTC 959284348 360345 NM_001139.2(ALOX12B):c.530G>A (p.Trp177Ter) ALOX12B Nov 14, 2016 MedGen:CN517202 not provided germline 17 8080778 CCCAGTTGCCCTGCGCTTCTCCCCACAGGTGGAATGGCTATATTCCGGGATTCCCAATTCT 724159829 17153 NM_003477.2(PDHX):c.641+1G>A PDHX Feb 01, 2002 MedGen:C1855553,OMIM:245349,Orphanet:ORPHA255182 Pyruvate dehydrogenase E3-binding protein deficiency germline 11 34960519 CACTGGCCCTCGGGGGATATTCACTAAAGAGTATGTGTTTGCTTTTTGTAATAACCAGTTC 72558442 103216 NM_000531.5(OTC):c.787G>A (p.Asp263Asn) OTC - MedGen:CN517202 not provided unknown X 38408945 GCAGCGCATGGAGGCAATGTATTAATTACAGACACTTGGATAAGCATGGGACAAGAAGAGG 587777466 143137 NM_001128159.2(VPS53):c.1556+5G>A VPS53 May 01, 2014 MedGen:C4014488,OMIM:615851,Orphanet:ORPHA247198 Pontocerebellar hypoplasia, type 2e germline 17 562498 AAAATCCTCTCTGGCAACCTGCCCAAGTGAGTCCTGTTCTTCATAGTCTGAGTGGTGGCAA 121909334 23512 NM_007126.4(VCP):c.572G>A (p.Arg191Gln) VCP Jul 24, 2017 MedGen:C3151403,OMIM:613954;MedGen:C3151403,OMIM:613954;MedGen:C1833662,OMIM:167320,Orphanet:ORPHA52430;MedGen:C1833662,OMIM:167320,Orphanet:ORPHA52430;MedGen:CN517202 Amyotrophic lateral sclerosis 14, with or without frontotemporal dementia;Amyotrophic lateral sclerosis 14, with or without frontotemporal dementia;Inclusion body myopathy with early-onset paget disease and frontotemporal dementia;Inclusion body myopathy with early-onset paget disease and frontotemporal dementia;not provided germline 9 35065255 TGATCCACTGCGAAGGGGAGCCTATCAAACGAGAGGTGAGTTTTCTCCCTGATTCCAGTAT 748915609 263877 NM_030813.5(CLPB):c.1501G>A (p.Glu501Lys) CLPB Sep 14, 2016 MedGen:C4225393,OMIM:616271,Orphanet:ORPHA445038 3-methylglutaconic aciduria with cataracts, neurologic involvement, and neutropenia germline 11 72295567 TTCATCATGACCTCCAATGTGGCCAGCGACGAGATCGCACAGCACGCGCTGCAGCTGAGGC 372245668 228225 NM_016614.2(TDP2):c.425+1G>A TDP2 Dec 28, 2017 MedGen:C4310780,OMIM:616949,Orphanet:ORPHA404493 Spinocerebellar ataxia, autosomal recessive 23 germline 6 24658560 GGCTCGAGGGGTGTGTTCCTACTTAGCTTTGTAAGTATTATCACTTCTATTTAATAGTAAT 121918122 29953 NM_000412.4(HRG):c.308G>A (p.Gly103Glu) HRG Jan 01, 1998 MedGen:C2751090,OMIM:613116,Orphanet:ORPHA217467 Thrombophilia, histidine-rich glycoprotein-related germline 3 186669945 CCTCAAGAGCCTCTTTCTTACAGGTGATCGGACAATGTAAGGTAATAGCTACAAGACATTC 730882032 224922 NM_000551.3(VHL):c.340+1G>A VHL Feb 26, 2016 MedGen:C0019562,OMIM:193300,Orphanet:ORPHA892,SNOMED CT:46659004 Von Hippel-Lindau syndrome germline 3 10142188 GCACGGGCCGCCGCATCCACAGCTACCGAGGTACGGGCCCGGCGCTTAGGCCCGACCCAGC 786205866 190049 NM_001958.3(EEF1A2):c.364G>A (p.Glu122Lys) EEF1A2 Apr 01, 2015 MedGen:C4225337,OMIM:616409;MedGen:C4225343,OMIM:616393 Epileptic encephalopathy, early infantile, 33;Mental retardation, autosomal dominant 38 germline 20 63495062 GCAGTGCTGATCGTGGCGGCGGGCGTGGGCGAGTTCGAGGCGGGCATCTCCAAGAATGGGC 28937285 25286 NM_000132.3(F8):c.2215G>A (p.Glu739Lys) F8 Jan 01, 1995 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154931575 AGTTGTGACAAGAACACTGGTGATTATTACGAGGACAGTTATGAAGATATTTCAGCATACT 869312128 225783 NM_183050.3(BCKDHB):c.3G>A (p.Met1Ile) BCKDHB Jan 01, 2014 MedGen:C0024776,OMIM:248600,SNOMED CT:27718001 Maple syrup urine disease germline 6 80106696 AGCCTGAGAATCCCGGTGGTGAGCGGGGATGGCGGTTGTAGCGGCGGCTGCCGGCTGGCTA 132630317 26079 NM_001399.4(EDA):c.1045G>A (p.Ala349Thr) EDA Dec 23, 2015 MedGen:C0162359,OMIM:305100,SNOMED CT:239007005;MedGen:CN517202 Hypohidrotic X-linked ectodermal dysplasia;not provided germline X 70035478 GGCAAGACCAACTACAACACTTGCTATACCGCAGGCGTCTGCCTCCTCAAGGCCCGGCAGA 374356079 209389 NM_016008.3(DYNC2LI1):c.993+1G>A DYNC2LI1 Jun 16, 2015 MedGen:C4310724,OMIM:617088 Short-rib thoracic dysplasia 15 with polydactyly germline;paternal 2 43805247 GTCGATGAGATGAGAATTCAGAAGGATCTGGTATTATCCTAAACATTTACTTAATTTCATC 397515554 76591 NM_005120.2(MED12):c.2873G>A (p.Gly958Glu) MED12 Jun 06, 2013 MedGen:C0220769,OMIM:305450,SNOMED CT:49984004 FG syndrome not provided X 71127359 CATGCAGGCTGTGTGGCGTCGTGAAGCATGGGATGAACCGGTCCGATGGCTCCTCTGCAGA 863225457 214863 NM_016218.3(POLK):c.1741G>A (p.Asp581Asn) POLK Mar 21, 2014 Human Phenotype Ontology:HP:0012125,MedGen:C0376358,OMIM:176807,SNOMED CT:399068003 Malignant tumor of prostate somatic 5 75596434 AAACGATCAGAAAGGAAATGGAGTCACCAAGATACATTTAAATGTGAAGCCGTGAATAAAC 199472815 67686 NM_000218.2(KCNQ1):c.1781G>A (p.Arg594Gln) KCNQ1 Sep 06, 2017 MedGen:CN230736;MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MeSH:D008133,MedGen:C0023976,SNOMED CT:9651007;MedGen:CN517202 Cardiovascular phenotype;Congenital long QT syndrome;Long QT syndrome;not provided germline 11 2778024 GCAGCAACACGATCGGCGCCCGCCTGAACCGAGTAGAAGACAAGGTAGGCTCACGCGCCGG 121908007 18859 NM_000456.2(SUOX):c.650G>A (p.Arg217Gln) SUOX May 26, 1998 MedGen:CN068763 Sulfite oxidase deficiency, isolated germline 12 56004039 ACATCACACCCAACCCTATCTTCTTCACCCGGAACCATCTGCCTGTACCTAACCTGGATCC 5030843 15626 NM_000277.2(PAH):c.473G>A (p.Arg158Gln) PAH Jul 07, 2017 MedGen:C0031485,OMIM:261600,Orphanet:ORPHA716,SNOMED CT:154735006;MedGen:CN517202 Phenylketonuria;not provided germline;unknown 12 102866632 GTTTTAAAGATCCTGTGTACCGTGCAAGACGGAAGCAGTTTGCTGACATTGCCTACAACTA 758872875 359070 NM_004199.2(P4HA2):c.871G>A (p.Glu291Lys) P4HA2 Dec 05, 2016 MedGen:C4310655,OMIM:617238 Myopia 25, autosomal dominant germline 5 132209170 GTGGACTACCTGCCTGAGAGGGATGTTTACGAGAGCCTCTGTCGTGGGGAGGGTGTCAAAC 1057519359 224598 NM_005957.4(MTHFR):c.236+1G>A MTHFR - MedGen:C1856058,OMIM:236250 Homocysteinemia due to MTHFR deficiency germline 1 11802880 TGCTGAGGGAGCTGTCAATCTCATCTCAAGGTAAACTCATGCAAGGTTAAGGTGGGAGGCG 104894258 31721 NM_000244.3(MEN1):c.608G>A (p.Trp203Ter) MEN1 Apr 18, 1997 MeSH:D018761,MedGen:C0025267,OMIM:131100,Orphanet:ORPHA652,SNOMED CT:30664006 Multiple endocrine neoplasia, type 1 germline 11 64807952 CCAATGGGGAGCAGACAGCTGAGGTCACCTGGCACGGCAAGGGCAACGAGGACCGCAGGGG 74603784 15668 NM_000277.2(PAH):c.136G>A (p.Gly46Ser) PAH Jan 01, 1996 MedGen:C0031485,OMIM:261600,Orphanet:ORPHA716,SNOMED CT:154735006;MedGen:CN517202 Phenylketonuria;not provided germline 12 102912823 TCACTGATCTTCTCACTCAAAGAAGAAGTTGGTGCATTGGCCAAAGTATTGCGCTTATTTG 28940885 18720 NM_000403.3(GALE):c.956G>A (p.Gly319Glu) GALE Sep 12, 2014 MedGen:C0751161,OMIM:230350,Orphanet:ORPHA79238,SNOMED CT:8849004;MedGen:CN517202 UDPglucose-4-epimerase deficiency;not provided germline 1 23796183 CCAACCCCAGCCTGGCCCAAGAGGAGCTGGGGTGGACAGCAGCCTTAGGGCTGGACAGGAT 267606816 26816 NM_001110556.1(FLNA):c.862G>A (p.Gly288Arg) FLNA Jan 02, 2007 MedGen:C0262436,OMIM:314400,Orphanet:ORPHA1864 Cardiac valvular dysplasia, X-linked germline X 154367403 AAACTGAACCCGAAGAAAGCCCGTGCCTACGGGCCAGGTGAGGGAGCCCCACCAGGGGTGC 63750597 472825 NM_000251.2(MSH2):c.1661G>A (p.Ser554Asn) MSH2 Sep 07, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 2 47466808 TCCAGAAGAATGGTGTTAAATTTACCAACAGGTTTGCAAGTCGTTATTATATTTTTAACCC 533755473 224629 NM_000255.3(MUT):c.1277G>A (p.Gly426Glu) MUT - MedGen:C1855114,OMIM:251000 Methylmalonic aciduria due to methylmalonyl-CoA mutase deficiency germline 6 49451521 CTGGGATTCCCAAAGTGGCTGATCCTTGGGGAGGTTCTTACATGATGGAATGTCTCACAAA 587777277 132020 NM_005654.5(NR2F1):c.335G>A (p.Arg112Lys) NR2F1 Feb 06, 2014 MedGen:C3810363,OMIM:615722,Orphanet:ORPHA401777 Bosch-Boonstra-Schaaf optic atrophy syndrome de novo;germline 5 93585358 CCTGCGAGGGCTGCAAAAGTTTCTTCAAGAGGAGCGTCCGCAGGAACTTAACTTACACATG 121965034 15185 NM_000274.3(OAT):c.3G>A (p.Met1Ile) OAT Feb 01, 1991 Human Phenotype Ontology:HP:0012026,MedGen:C0599035,OMIM:258870,SNOMED CT:276426004 Ornithine aminotransferase deficiency germline 10 124412169 TCTGTGGTTTTTCTACTTGAAGGACACAATGTTTTCCAAACTAGCACATTTGCAGAGGTTT 118192101 24622 m.8313G>A MT-TK Nov 12, 2012 MedGen:C0872218,OMIM:603041,Orphanet:ORPHA298 Mitochondrial DNA depletion syndrome 1 (MNGIE type) germline MT 8313 CCCTCTAGAGCCCACTGTAAAGCTAACTTAGCATTAACCTTTTAAGTTAAAGATTAAGAGA 28939078 20392 NM_016006.4(ABHD5):c.778G>A (p.Glu260Lys) ABHD5 Jul 16, 2004 MedGen:C0268238,OMIM:275630,Orphanet:ORPHA98907,SNOMED CT:19604005 Triglyceride storage disease with ichthyosis germline 3 43717675 TCGTGATTTTCTCCTTGCCGTTAAAGTGGTGAGACAGCTTTCAAGAATATGACTATTCCTT 397514499 48025 NM_004069.4(AP2S1):c.44G>A (p.Arg15His) AP2S1 Oct 10, 2017 MedGen:C1833372,OMIM:600740,Orphanet:ORPHA101050;MedGen:CN517202 Hypocalciuric hypercalcemia, familial, type III;not provided germline 19 46846102 TCCTCATCCAGAACCGGGCAGGCAAGACGCGCCTGGCCAAGTGGTACATGCAGTTTGATGA 587783756 170027 NM_000252.2(MTM1):c.1136G>A (p.Trp379Ter) MTM1 Feb 08, 2013 MedGen:C0410203,OMIM:310400,Orphanet:ORPHA596,SNOMED CT:46804001 Severe X-linked myotubular myopathy germline X 150657903 GTTCAGTGCTTGTGCATTGCAGTGACGGATGGGACAGGACTGCTCAGCTGACATCCTTGGC 121434343 17071 NM_017780.3(CHD7):c.6322G>A (p.Gly2108Arg) CHD7 Jan 01, 2008 MedGen:C0265354,OMIM:214800,Orphanet:ORPHA138,SNOMED CT:47535005 CHARGE association germline 8 60853047 CGAGACTTGCTGGTTGGTGCTGCTAAACACGGGGTCAGTCGGACGGATTATCACATCCTCA 587783843 169956 NM_000252.2(MTM1):c.63+1G>A MTM1 Feb 08, 2013 MedGen:C0410203,OMIM:310400,Orphanet:ORPHA596,SNOMED CT:46804001 Severe X-linked myotubular myopathy germline X 150592678 CACTCCTTGGAGAATGAGTCTATTAAGAGGGTAAGTTGAATTTTCAGATTTATCTGTCTCT 72645356 414019 NM_000088.3(COL1A1):c.977G>A (p.Gly326Asp) COL1A1 - MedGen:C0023931,OMIM:166200,SNOMED CT:385482004 Osteogenesis imperfecta type I maternal 17 50196180 CTCTCCTGCAGGGTGCTCGTGGAAATGATGGTGCTACTGGTGCTGCCGGGCCCCCTGTGAG 797045623 207862 NM_000207.2(INS):c.188-31G>A INS Jun 28, 2016 MedGen:C1833104,OMIM:606176,Orphanet:ORPHA99885;MedGen:CN517202 Permanent neonatal diabetes mellitus;not provided germline 11 2160028 TCCTGTGTCCCTCTGCCTCGCCGCTGTTCCGGAACCTGCTCTGCGCGGCACGTCCTGGCAG 111033615 25336 NM_000132.3(F8):c.5900G>A (p.Gly1967Asp) F8 Apr 01, 1994 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154904004 AAAGGATTCGATGGTATCTGCTCAGCATGGGCAGCAATGAAAACATCCATTCTATTCATTT 776569219 442955 NM_001271208.1(NEB):c.11627G>A (p.Trp3876Ter) NEB Jun 30, 2017 MedGen:C1850569,OMIM:256030;MedGen:CN517202 Nemaline myopathy 2;not provided germline 2 151612364 TTCAGGCTATTTACAAATCTGATCTTGAGTGGCTGAGAGGCATAGGATGGGTTCCCATTGG 376252276 76611 NM_012144.3(DNAI1):c.1490G>A (p.Gly497Asp) DNAI1 Jun 22, 2017 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244;MedGen:C0022521,OMIM:244400,Orphanet:ORPHA98861,SNOMED CT:42402006 Ciliary dyskinesia;Kartagener syndrome germline 9 34513112 GCTAAGCCTGCCCCTCCCTCTTTTCCCAAGGTTGTGGCACTGCCTTTGACTTCCACAAAGA 886037869 247750 NM_016004.4(IFT52):c.595G>A (p.Ala199Thr) IFT52 Aug 30, 2016 MedGen:C4310718,OMIM:617102 Short-rib thoracic dysplasia 16 with or without polydactyly germline 20 43613959 GTCTGCTTCCCACTTAACAGACCCATTTTGGCTTTCTATCACTCAAAGGTACAGCTTTTCT 1057517988 360608 NM_001849.3(COL6A2):c.855+1G>A COL6A2 Oct 17, 2016 MedGen:CN517202 not provided germline 21 46115926 CCGGGAGAGCCTGGCCAGAAGGGAAGACAGGTGAGTGTCCTTGCCCCACGCCCGCCCCGCC 770446752 411605 NM_015909.3(NBAS):c.1749G>A (p.Trp583Ter) NBAS - MedGen:C3809651,OMIM:616483,Orphanet:ORPHA464724 Infantile liver failure syndrome 2 germline 2 15468510 TATGCAGAGTAAAATAAAGAAGCGATCCTGGGTTCTCCATGAGTGTTTGGAAAGAGTTCCT 373607247 425322 NM_022089.3(ATP13A2):c.212G>A (p.Trp71Ter) ATP13A2 Jun 06, 2017 MedGen:CN517202 not provided germline 1 17005450 CTTTGCTGCTCTTCCGTTGGAAGCCCCTGTGGGGGGTGCGGCTGCGGCTCCGGCCCTGCAA 946234163 224769 NM_001257989.1(TYMP):c.865G>A (p.Glu289Lys) TYMP Jan 14, 2016 MedGen:C0872218,OMIM:603041,Orphanet:ORPHA298 Mitochondrial DNA depletion syndrome 1 (MNGIE type) germline 22 50526639 CGCTGCGTGGGCCACGCCCTGGAGGTGGAGGAGGCGCTGCTCTGCATGGACGGCGCAGGCC 1085307119 404677 NM_000988.4(RPL27):c.-2-1G>A RPL27 Mar 28, 2017 MedGen:CN241838,OMIM:617408 Diamond-Blackfan anemia 16 germline 17 42998748 TTAAGTGGCCCTTTCTCCTTGCTCTCTGCAGAAATGGGCAAGTTCATGAAACCTGGGAAGG 121918484 28351 NM_000506.3(F2):c.1054G>A (p.Glu352Lys) F2 Jan 01, 2000 MedGen:C0272317,SNOMED CT:33297000 Hereditary factor II deficiency disease germline 11 46726761 TTCGAGAAGAAGTCGCTGGAGGACAAAACCGAAAGAGAGCTCCTGGAATCCTACATCGACG 61753245 186702 NM_000288.3(PEX7):c.618G>A (p.Trp206Ter) PEX7 Nov 14, 2017 MedGen:C1859133,OMIM:215100,Orphanet:ORPHA309789;MedGen:CN517202 Rhizomelic chondrodysplasia punctata type 1;not provided germline;unknown 6 136866718 ACATCAGGCAGAAATCTTGAGTTGTGACTGGTGTAAATACAATGAGGTATAGTGTATGGCT 121918509 28337 NM_000141.4(FGFR2):c.1882G>A (p.Ala628Thr) FGFR2 Dec 07, 2016 MedGen:C0265269,OMIM:149730,SNOMED CT:23817003;MedGen:CN517202 Levy-Hollister syndrome;not provided germline 10 121488095 TCTTGATTTCAGTGTATTCATCGAGATTTAGCAGCCAGAAATGTTTTGGTAACAGAAAACA 199476128 24705 m.6480G>A MT-CO1 Nov 01, 1998 MedGen:C0268237,OMIM:220110,Orphanet:ORPHA254905,SNOMED CT:67434000 Hepatic failure, early-onset, and neurologic disorder due to cytochrome C oxidase deficiency germline MT 6480 CTCTTCGTCTGATCCGTCCTAATCACAGCAGTCCTACTTCTCCTATCTCTCCCAGTCCTAG 397509411 70508 NM_001376.4(DYNC1H1):c.10151G>A (p.Arg3384Gln) DYNC1H1 Jun 01, 2013 MedGen:C3281202,OMIM:614563 Mental retardation, autosomal dominant 13 germline 14 102033136 ATCCAAGTTACAATTATGAAATTGTGAATCGGGCTTCCCTGGCTTGCGGCCCTATGGTGAA 1057523751 368619 NM_000094.3(COL7A1):c.5388+5G>A COL7A1 Jul 03, 2017 MedGen:CN517202 not provided germline 3 48579192 GAGCCGCTGGGCCCTCTGGGCCGAATGTGAGTCTTGGTAGTCCTGCCTGGTTGTCCCCTTC 1064796499 410068 NM_000088.3(COL1A1):c.3416G>A (p.Gly1139Asp) COL1A1 Feb 22, 2017 MedGen:CN517202 not provided germline 17 50187491 AAGGTCCCTCTGGAGCCTCTGGTCCTGCTGGTCCCCGAGTAAGTCATGCCTTCTCTCTCCT 104886313 35768 NM_000495.4(COL4A5):c.1587+1G>A COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108597069 GCTGGTGCAACTGGTCCCAAAGGATTACCAGTAAGTTTTGAGTATATTATAAAACAAAAAG 515726224 136395 NM_023110.2(FGFR1):c.1460G>A (p.Gly487Asp) FGFR1 Oct 24, 2013 MedGen:C1563720,OMIM:147950 Kallmann syndrome 2 germline 8 38417962 GACTGGTCTTAGGCAAACCCCTGGGAGAGGGCTGCTTTGGGCAGGTGGTGTTGGCAGAGGC 886041692 264094 NM_004321.7(KIF1A):c.761G>A (p.Arg254Gln) KIF1A Aug 05, 2016 MedGen:CN517202 not provided germline 2 240783776 TCAGCCTGGTGGACCTGGCTGGGAGCGAGCGGGCTGACTCCACGGGAGCCAAGGGCACGCG 773618224 389107 NM_021222.2(PRUNE1):c.316G>A (p.Asp106Asn) PRUNE1 Dec 11, 2017 Human Phenotype Ontology:HP:0012443,MedGen:C4021085;MedGen:CN243994,OMIM:617481 Abnormality of brain morphology;Neurodevelopmental disorder with microcephaly, hypotonia, and variable brain anomalies germline;inherited 1 151018650 CAGGCTGGCCAACTCACCCTCATCCTTGTCGACCATCATATCTTATCCAAGTAAGCACAAG 985064686 440082 NM_001199397.1(NEK1):c.1226G>A (p.Trp409Ter) NEK1 Jun 01, 2017 MedGen:C0024507,OMIM:263520,SNOMED CT:72922008 Short rib-polydactyly syndrome, Majewski type unknown 4 169561520 AAAGAATAAATAGGGCCAGGGAACAAGGATGGAGAAATGTGCTAAGTGCTGGTGGAAGTGG 863225042 213898 NM_001256794.1(BMPR1B):c.657G>A (p.Trp219Ter) BMPR1B Jun 01, 2014 MedGen:C4225404,OMIM:609441 Acromesomelic dysplasia, Demirhan type germline 4 95129933 GATTGGAAAAGGTCGCTATGGGGAAGTTTGGATGGGAAAGTGGCGTGGCGAAAAGGTAGCT 80338663 76456 NM_000081.3(LYST):c.8428G>A (p.Glu2810Lys) LYST Feb 16, 2012 MedGen:C0007965,OMIM:214500,Orphanet:ORPHA167,SNOMED CT:111396008 Chédiak-Higashi syndrome not provided 1 235734590 CATAATCACCAAGGTGAATTGACTGAAGAAGAGCTAGGCACAGCAGAACTGCTTATGAATG 142027093 191968 NM_213599.2(ANO5):c.1898+1G>A ANO5 Aug 21, 2017 MedGen:C1969785,OMIM:611307,Orphanet:ORPHA206549;MedGen:CN517202 Limb-girdle muscular dystrophy, type 2L;not provided germline 11 22263044 TTTTGGAAACATTAAAGAAGCCATTTATCCGTATGTATGACTTACAAGCTTTTTATTTGAT 80358042 46002 NM_007294.3(BRCA1):c.212+1G>A BRCA1 Mar 10, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline;unknown 17 43106455 TCCTTTATGTAAGAATGATATAACCAAAAGGTATATAATTTGGTAATGATGCTAGGTTGGA -1 452440 NM_181426.1(CCDC39):c.1874+1G>A CCDC39 Jun 03, 2017 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244 Ciliary dyskinesia germline 3 180641992 ATATGTTGATCAAGAACGGGAAAACATAAGGTAATTTTCAGTTTTAAAACTGCTGAGGAAT 752924362 230781 NM_023036.5(DNAI2):c.1304G>A (p.Trp435Ter) DNAI2 Jun 29, 2017 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244;MedGen:C2676235,OMIM:612444 Ciliary dyskinesia;Ciliary dyskinesia, primary, 9 germline;unknown 17 74309345 CCACCAGGATGGACGGAACCCTGGATATCTGGGACTTCATGTTCGAGCAGTGCGATCCCAC 587777450 141332 NM_022068.3(PIEZO2):c.8057G>A (p.Arg2686His) PIEZO2 Jun 04, 2014 MedGen:C0220666,OMIM:114300,SNOMED CT:237850008;MedGen:C1862472,OMIM:108145,Orphanet:ORPHA1154 Gordon's syndrome;Oculomelic amyoplasia de novo;germline 18 10671729 CAGTTGTCCTTGTGATTGGGAAATTTGTCCGTGAATTCTTCAGTGGGATTTCTCACTCCAT 372010465 210411 NM_000071.2(CBS):c.1111G>A (p.Val371Met) CBS Aug 05, 2016 MedGen:C3150344,OMIM:236200;MedGen:CN517202 Homocystinuria due to CBS deficiency;not provided germline;unknown 21 43060475 GCGCAGGAGCTGCAGGAGGGCCAGCGCTGCGTGGTCATTCTGCCCGACTCAGTGCGGAACT 750987123 431652 NM_001029883.2(C2orf71):c.758G>A (p.Trp253Ter) C2orf71 Jan 01, 2015 Human Phenotype Ontology:HP:0000556,MedGen:C0854723,Orphanet:ORPHA71862,SNOMED CT:314407005 Retinal dystrophy unknown 2 29073504 TCCTGCAGGAAGTCAGGGAGGATCTGGCTTGGCCTTTGAAGAAAAGAGAGCCCCAGGAGCA 387907064 39901 NM_001145320.1(ADAMTSL2):c.215G>A (p.Arg72Gln) ADAMTSL2 Jun 01, 2011 MedGen:C3278147,OMIM:231050,SNOMED CT:28557005 Geleophysic dysplasia 1 germline 9 133537529 GTTGCGGGGGTGGGGTGACATCCCAGGAGCGGCACTGCCTGCAGCAGAGGTGCGAGGTTGG 387907194 40347 NM_003070.4(SMARCA2):c.3395G>A (p.Gly1132Asp) SMARCA2 Apr 01, 2012 MedGen:C1303073,OMIM:601358,Orphanet:ORPHA3051,SNOMED CT:401046009 Nicolaides-Baraitser syndrome germline 9 2110356 TCTTGCTGAGCACAAGAGCTGGTGGCCTGGGCTTAAATCTTCAGGCAGCTGATACAGTGGT 62636503 77568 NM_006158.4(NEFL):c.1186G>A (p.Glu396Lys) NEFL Mar 06, 2018 MedGen:CN847583,OMIM:617882;MedGen:C1843225,OMIM:607684,Orphanet:ORPHA99939;MedGen:CN517202 CHARCOT-MARIE-TOOTH DISEASE, DOMINANT INTERMEDIATE G;Charcot-Marie-Tooth disease type 2E;not provided germline 8 24953779 ATCTGCATCCCCAGGAAACTCTTGGAAGGCGAGGAGACCCGACTCAGTTTCACCAGCGTGG 104894775 26202 NM_000074.2(CD40LG):c.419G>A (p.Trp140Ter) CD40LG Apr 01, 1995 MedGen:C0398689,OMIM:308230,Orphanet:ORPHA101088 Immunodeficiency with hyper IgM type 1 germline X 136659048 CTTTCCCTTTCTTTGTAACAGTGTTACAGTGGGCTGAAAAAGGATACTACACCATGAGCAA 79560904 28608 NM_000212.2(ITGB3):c.740G>A (p.Gly247Asp) ITGB3 Mar 01, 2010 MedGen:C0040015,OMIM:273800,Orphanet:ORPHA849,SNOMED CT:32942005 Glanzmann thrombasthenia germline 17 47286385 GTGTGTCACGGAACCGAGATGCCCCAGAGGGTGGCTTTGATGCCATCATGCAGGCTACAGT 121908097 19297 NM_000784.3(CYP27A1):c.1421G>A (p.Arg474Gln) CYP27A1 Aug 01, 2013 MedGen:C0238052,OMIM:213700,Orphanet:ORPHA909,SNOMED CT:63246000 Cholestanol storage disease germline 2 218814702 TTGGCTCTGTGCCCTTTGGCTATGGGGTCCGGGCCTGCCTGGGCCGCAGGATTGCAGAGCT 56829062 24353 NM_000423.2(KRT2):c.1426G>A (p.Glu476Lys) KRT2 Nov 01, 1998 MedGen:C0432306,OMIM:146800,Orphanet:ORPHA455,SNOMED CT:254169002;MedGen:CN517202 Ichthyosis bullosa of Siemens;not provided germline 12 52646783 CTGATGAACGTGAAGCTGGCCCTAGATGTGGAGATCGCCACCTACCGCAAACTGCTGGAGG -1 426009 NM_012064.3(MIP):c.698G>A (p.Arg233Lys) MIP May 08, 2017 MedGen:CN517202 not provided germline 12 56451374 TCTTCCCCCGGCTCAAGAGTATTTCTGAGAGACTGTCTGTCCTCAAGGGTGCCAAACCCGA 1060501650 398037 NM_000051.3(ATM):c.8880G>A (p.Trp2960Ter) ATM Oct 16, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0027672,SNOMED CT:699346009 Ataxia-telangiectasia syndrome;Hereditary cancer-predisposing syndrome germline 11 108365111 GGTCCTTCTATATGATCCACTCTTTGACTGGACCATGAATCCTTTGAAAGCTTTGTATTTA 63750144 95889 NM_000249.3(MLH1):c.884G>A (p.Ser295Asn) MLH1 Aug 13, 2015 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Hereditary cancer-predisposing syndrome;Lynch syndrome germline 3 37017599 CCAAAAACACACACCCATTCCTGTACCTCAGGTAATGTAGCACCAAACTCCTCAACCAAGA 730881979 181057 NM_000455.4(STK11):c.526G>A (p.Asp176Asn) STK11 Apr 07, 2017 MeSH:D010580,MedGen:C0031269,OMIM:175200,Orphanet:ORPHA2869,SNOMED CT:54411001 Peutz-Jeghers syndrome germline;somatic 19 1220434 TACCTGCATAGCCAGGGCATTGTGCACAAGGACATCAAGCCGGGGAACCTGCTGCTCACCA 121908153 19416 NM_001243133.1(NLRP3):c.907G>A (p.Asp303Asn) NLRP3 Nov 28, 2017 MedGen:C0409818,OMIM:607115,Orphanet:ORPHA1451,SNOMED CT:239826001;MedGen:C2316212,Orphanet:ORPHA208650,SNOMED CT:430079001;MedGen:C0268390,OMIM:191900,Orphanet:ORPHA575,SNOMED CT:15123008;MedGen:C0343068,OMIM:120100,Orphanet:ORPHA47045,SNOMED CT:238687000;MedGen:CN517202 Chronic infantile neurological, cutaneous and articular syndrome;Cryopyrin associated periodic syndrome;Familial amyloid nephropathy with urticaria AND deafness;Familial cold urticaria;not provided germline 1 247424356 TCCAGAATCCTCTTCCTCATGGACGGCTTCGATGAGCTGCAAGGTGCCTTTGACGAGCACA -1 440096 NM_147127.4(EVC2):c.3360+1G>A EVC2 Jun 01, 2017 MedGen:C0265275,Orphanet:ORPHA474,SNOMED CT:75049004 Jeune thoracic dystrophy unknown 4 5574684 GCAGACACCTTTGCAACCCTGTGCAGCCAGGTGAGAAGGTACTGGCAGGGTCTGAGGCCAC 794726743 449138 NM_001165963.2(SCN1A):c.2261G>A (p.Trp754Ter) SCN1A Mar 04, 2017 MedGen:C0393706,Orphanet:ORPHA1934 Early infantile epileptic encephalopathy germline 2 166041385 TATTCTTAATCTGGGACTGTTCTCCATATTGGTTAAAAGTGAAACATGTTGTCAACCTGGT 587784059 168325 NM_133433.3(NIPBL):c.869-1G>A NIPBL Feb 08, 2013 MedGen:CN029798,OMIM:122470 Cornelia de Lange syndrome 1 germline 5 36975775 AACTGTTACTTCTATCGAATTATTTTTCTAGGCTCAAGACCACCTTTAATCCTACAATCTC 387907116 40082 NM_152383.4(DIS3L2):c.1466G>A (p.Cys489Tyr) DIS3L2 Feb 05, 2012 MedGen:C0796113,OMIM:267000,Orphanet:ORPHA2849 Renal hamartomas nephroblastomatosis and fetal gigantism germline 2 232263247 AATGGTTTGGCCGGACCATCATCCGCTCCTGCACCAAACTTAGCTACGAGCATGCACAGAG 67486158 103009 NM_000531.5(OTC):c.148G>A (p.Gly50Arg) OTC - MedGen:CN517202 not provided unknown X 38367361 CGTGACCTTCTCACTCTAAAAAACTTTACCGGAGAAGAAATTAAATATATGCTATGGCTAT 748112833 199853 NM_013254.3(TBK1):c.2086G>A (p.Glu696Lys) TBK1 Jul 01, 2015 MedGen:C4225325,OMIM:616439 Frontotemporal dementia and/or amyotrophic lateral sclerosis 4 germline 12 64497987 TATTTTATTAGTATGAAGAAATTAAAGGAAGAGATGGAAGGGGTGGTTAAAGAACTTGCTG 398124126 100856 NM_004369.3(COL6A3):c.6210+1G>A COL6A3 Aug 15, 2016 MedGen:CN029274,OMIM:158810;MedGen:CN033863,OMIM:254090;MedGen:CN517202 Bethlem myopathy 1;Ullrich congenital muscular dystrophy 1;not provided germline 2 237361120 CGAGGCTATCCTGGTGATGAGGGTGGACCCGTAAGTAAAAATTGTTTTAGTCCCTAAAATT 199475693 462148 NM_000277.2(PAH):c.865G>A (p.Gly289Arg) PAH Jun 28, 2016 MedGen:C0031485,OMIM:261600,Orphanet:ORPHA716,SNOMED CT:154735006 Phenylketonuria germline 12 102851734 TCTTTCAGTGACATCTGCCATGAGCTGTTGGGACATGTGCCCTTGTTTTCAGATCGCAGCT -1 434432 NM_172250.2(MMAA):c.575G>A (p.Gly192Asp) MMAA - MedGen:C1855109,OMIM:251100,Orphanet:ORPHA79310 Methylmalonic aciduria cblA type germline 4 145645998 TGTAACTGTATGTTTTAGGATCACTCTTAGGTGATAAAACCCGAATGACTGAGTTATCAAG 1131691547 421284 NM_001271208.1(NEB):c.8265+1G>A NEB Sep 01, 2015 MedGen:CN517202 not provided germline 2 151642764 GCTAAACAAAACAAAGTAAATTACAGTGAGGTAAGTAATATATTCATAGTGCGTGATACAT 794726699 187745 NM_001165963.1(SCN1A):c.4302G>A (p.Trp1434Ter) SCN1A Dec 20, 2014 MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002 Severe myoclonic epilepsy in infancy maternal 2 165999759 TCCTTCTTAATAGGCCACATTCAAAGGATGGATGGATATAATGTATGCAGCAGTTGATTCC 748190164 215043 NM_000520.5(HEXA):c.340G>A (p.Glu114Lys) HEXA Apr 07, 2011 MedGen:C0039373,OMIM:272800,Orphanet:ORPHA845,SNOMED CT:111385000 Tay-Sachs disease germline 15 72356531 TGTAACCAGCTTCCTACTTTGGAGTCAGTGGAGAATTGTAAGTACCATCCTGTTCCCTGTC 587782944 165543 NM_000138.4(FBN1):c.1496G>A (p.Cys499Tyr) FBN1 Jul 18, 2016 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006 Marfan syndrome germline 15 48513641 CAGATGTTGATGAATGTGAGAAAAACCCCTGTGCTGGTGGTGAGTGTATTAACAACCAGGG 758115945 207919 NM_000372.4(TYR):c.661G>A (p.Glu221Lys) TYR May 15, 2015 MedGen:C0268494,OMIM:203100,Orphanet:ORPHA79431,SNOMED CT:6483008 Tyrosinase-negative oculocutaneous albinism germline 11 89178614 CATAGACTCTTCTTGTTGCGGTGGGAACAAGAAATCCAGAAGCTGACAGGAGATGAAAACT 757252110 245853 NM_000527.4(LDLR):c.915G>A (p.Trp305Ter) LDLR Mar 25, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11107489 CTGCAACATGGCTAGAGACTGCCGGGACTGGTCAGATGAACCCATCAAAGAGTGCGGTGAG 1057516983 357134 NM_000016.5(ACADM):c.387+1G>A ACADM Oct 12, 2016 MedGen:C0220710,OMIM:201450,Orphanet:ORPHA42,SNOMED CT:128596003 Medium-chain acyl-coenzyme A dehydrogenase deficiency unknown 1 75733629 CAGACTGCTATTGAAGGAAATTCTTTGGGGGTAAGTGACTTAGAAAATTAACTACCTAACT 80359214 67497 NM_000059.3(BRCA2):c.93G>A (p.Trp31Ter) BRCA2 Dec 06, 2016 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome germline 13 32319102 AATAGATTTAGGACCAATAAGTCTTAATTGGTTTGAAGAACTTTCTTCAGAAGCTCCACCC 587777106 102967 NM_001013703.3(EIF2AK4):c.1754G>A (p.Arg585Gln) EIF2AK4 Feb 12, 2014 MedGen:C0340848,OMIM:234810,SNOMED CT:234161007 Familial pulmonary capillary hemangiomatosis germline 15 39973685 TCTTTAGTGAGACACAGAGACAGTTTTCCCGATACTTCATTGAGTTTGAAGAATTACAACT 121964954 27067 NM_004453.3(ETFDH):c.250G>A (p.Ala84Thr) ETFDH May 02, 2017 MedGen:C3278156;MedGen:C0268596,OMIM:231680,Orphanet:ORPHA26791,SNOMED CT:22886006;MedGen:CN517202 Glutaric acidemia IIC;Glutaric aciduria, type 2;not provided germline 4 158682269 GTTGGTGCAGGCCCTGCAGGGCTCTCTGCAGCTGTTCGTCTAAAACAGTTGGCTGTGGCAC 200549601 247529 NM_016213.4(TRIP4):c.950G>A (p.Arg317Gln) TRIP4 Aug 10, 2016 MedGen:C4310736,OMIM:617066 Muscular dystrophy, congenital, davignon-chauveau type germline 15 64409735 AGAAGCGAGAGGAGGAGCTGAGAGAACTTCGACACGCCTCTCGACTTTCTAAGAAGGTCAC 397515544 76560 NM_001876.3(CPT1A):c.2156G>A (p.Gly719Asp) CPT1A Mar 07, 2013 MedGen:C0342789,OMIM:255120,SNOMED CT:238001003 Carnitine palmitoyltransferase I deficiency not provided 11 68759648 ATTCCCTTGTCCTCCAGGTTGCTGATGACGGCTATGGTGTGTCGTACATCCTTGTGGGAGA 111033677 36492 NM_000155.3(GALT):c.337G>A (p.Asp113Asn) GALT Dec 04, 2012 MedGen:C0268151,OMIM:230400,Orphanet:ORPHA79239,SNOMED CT:124354006 Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase not provided 9 34647665 GAGTGATACTCCTTTACCTCAGGACCCAGTGATCATCCCCTTTTCCAAGCAAAGTCTGCTC 200444084 187022 NM_000271.4(NPC1):c.3557G>A (p.Arg1186His) NPC1 Feb 24, 2017 MedGen:C3179455,OMIM:257220;MedGen:CN517202 Niemann-Pick disease type C1;not provided germline;unknown 18 23534480 CGGTGAGCATGAAAGGCAGCCGCGTGGAGCGCGCGGAAGAGGCACTTGCCCACATGGGCAG 387906290 359873 NM_000218.2(KCNQ1):c.922-1G>A KCNQ1 May 12, 2016 MedGen:CN517202 not provided germline 11 2583434 CCGTGGCTGACCACTGTCCCTCTCCCTGCAGGTCACAGTCACCACCATCGGCTATGGGGAC 397514494 48018 NM_021625.4(TRPV4):c.557G>A (p.Arg186Gln) TRPV4 Dec 02, 2016 MedGen:C2079540,OMIM:606071;Gene:8094,MedGen:C1838492,OMIM:600175,Orphanet:ORPHA1216;MedGen:C0027868,Orphanet:ORPHA68381;MedGen:CN517202 Charcot-Marie-Tooth disease type 2C;Distal spinal muscular atrophy, congenital nonprogressive;Neuromuscular Diseases;not provided germline 12 109808298 ACAAGAAACGCCTAACTGATGAGGAGTTTCGAGGTGAGCCACCCAGATGGGCATAGCCAGT 121917742 28163 NM_000537.3(REN):c.689G>A (p.Arg230Lys) REN Sep 01, 2005 Human Phenotype Ontology:HP:0008660,MedGen:C0266313,OMIM:267430,SNOMED CT:204949001 Renal dysplasia germline 1 204159399 AAGAGGACGTCTTCTCTTTCTACTACAACAGGTGGGGACTGGGACTCCAAGGGCTGAGGTG 150774447 104955 NM_000350.2(ABCA4):c.161G>A (p.Cys54Tyr) ABCA4 Jan 01, 2016 MedGen:C1858806,OMIM:604116;MedGen:C1866422,OMIM:601718;MeSH:C535804,MedGen:C1855465,OMIM:248200;MedGen:CN517202 Cone-rod dystrophy 3;Retinitis pigmentosa 19;Stargardt disease 1;not provided germline 1 94111579 CCCGTCTTGTCCTCATTTTCTGTTTTAAAGGCCATTTCCCCAACAAGGCGATGCCCTCAGC 121912295 26625 NM_001363.4(DKC1):c.1205G>A (p.Gly402Glu) DKC1 May 10, 2012 MedGen:C1148551,OMIM:305000 Dyskeratosis congenita X-linked germline X 154774651 TGATCAAGCAGGGCCTTCTGGACAAGCATGGGAAGCCCACAGACAGCACACCTGCCACCTG 199839039 175965 NM_153700.2(STRC):c.4701+1G>A STRC Nov 23, 2015 MedGen:C1863561,OMIM:603720;MedGen:CN043648,Orphanet:ORPHA87884 Deafness, autosomal recessive 16;Nonsyndromic hearing loss and deafness germline;paternal 15 43601395 GGGCAGATAGATGGCTGGAGCACCACTCAGGTAACACTTTTCCTCCTCCCTACGGCTTCCC 61195471 57234 NM_170707.3(LMNA):c.607G>A (p.Glu203Lys) LMNA Jul 14, 2017 MedGen:C1449563,OMIM:115200,Orphanet:ORPHA300751;EFO:EFO_0000407,Human Phenotype Ontology:HP:0001644,MedGen:C0007193,Orphanet:ORPHA217604,SNOMED CT:195021004;MedGen:CN517202 Dilated cardiomyopathy 1A;Primary dilated cardiomyopathy;not provided germline 1 156134496 GCTGAGAACAGGCTGCAGACCATGAAGGAGGAACTGGACTTCCAGAAGAACATCTACAGTG 199473383 78479 NM_000891.2(KCNJ2):c.644G>A (p.Gly215Asp) KCNJ2 Feb 18, 2017 MedGen:C1563715,OMIM:170390,Orphanet:ORPHA37553,SNOMED CT:422348008;MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000 Andersen Tawil syndrome;Congenital long QT syndrome germline 17 70175683 ACGGCAAGCTGTGTTTGATGTGGCGAGTGGGCAATCTTCGGAAAAGCCACTTGGTGGAAGC 367928692 55166 NM_022124.5(CDH23):c.6050-9G>A CDH23 Sep 27, 2016 MedGen:C1832845,OMIM:601067;MedGen:CN517202 Usher syndrome, type 1D;not provided germline;unknown 10 71791123 TTTCTGTGTGTTTCCCTGGCTGGCGGCACCGGGTGCCAGGTGTGGTGACCGTGAGGTCAGG 1135401743 390707 NM_012205.2(HAAO):c.558G>A (p.Trp186Ter) HAAO Sep 21, 2017 MedGen:CN241975;MedGen:CN482173,OMIM:617660 Congenital NAD deficiency disorder;VERTEBRAL, CARDIAC, RENAL, AND LIMB DEFECTS SYNDROME 1 germline 2 42769785 CATCATGGAGCCCATGTCCCTGGATGCCTGGCTGGACAGCCACCACAGGGAGCTGCAGGCA 104886225 35958 NM_000495.4(COL4A5):c.3319G>A (p.Gly1107Arg) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive germline X 108655403 AAAGGTTCTGTGGGAGATCCTGGTTTGCCCGGATTACCAGGAACCCCTGGAGCAAAAGGAC 786205058 16440 NM_153609.3(TMPRSS6):c.1582+1G>A TMPRSS6 May 01, 2008 Human Phenotype Ontology:HP:0001935,MedGen:C0085576,OMIM:206200,Orphanet:ORPHA209981,SNOMED CT:234349007 Microcytic anemia germline 22 37073531 ACGGCAGCGACGAAGAGCAGTGCCAGGAAGGTAGGGCAGGCCTAGCCGAGTGTCTGGAGGG 121964875 27278 NM_004360.4(CDH1):c.59G>A (p.Trp20Ter) CDH1 Apr 01, 1999 MedGen:C1708349,OMIM:137215,Orphanet:ORPHA26106 Hereditary diffuse gastric cancer germline 16 68738307 CTACCTTTCCCCCACCCCAGGTCTCCTCTTGGCTCTGCCAGGAGCCGGAGCCCTGCCACCC 143523371 265192 NM_000152.4(GAA):c.546G>A (p.Thr182=) GAA May 03, 2017 MedGen:C0017921,OMIM:232300,Orphanet:ORPHA365,SNOMED CT:124462004,SNOMED CT:237967002 Glycogen storage disease, type II germline 17 80105132 GATGGAGACTGAGAACCGCCTCCACTTCACGGTGGGCAGGGCAGGGGCGGGGGCGGCGGCC 121908005 18871 NM_000017.3(ACADS):c.268G>A (p.Gly90Ser) ACADS Jan 01, 2001 MedGen:C0342783,OMIM:201470,Orphanet:ORPHA26792,SNOMED CT:124166007 Deficiency of butyryl-CoA dehydrogenase germline 12 120737043 CTGGCCATGGACGTGCCCGAGGAGCTTGGCGGTGCTGGCCTCGATTACCTGGCCTACGCCA 527236037 152906 NM_000263.3(NAGLU):c.1949G>A (p.Gly650Glu) NAGLU - MedGen:C0086648,OMIM:252920,Orphanet:ORPHA79270,SNOMED CT:59990008 Mucopolysaccharidosis, MPS-III-B inherited 17 42543955 AGAACAGCCGCTACCAGCTGACCTTGTGGGGGCCAGAAGGCAACATCCTGGACTATGCCAA 80356504 47564 NM_001457.3(FLNB):c.502G>A (p.Gly168Ser) FLNB Oct 09, 2008 MedGen:CN164251,SNOMED CT:43814000 FLNB-Related Disorders not provided 3 58077255 ATCACCAACTTTAACCAGAACTGGCAAGACGGCAAAGCCCTGGGAGCCCTGGTAGACAGCT 104894971 24793 NM_003140.2(SRY):c.53G>A (p.Ser18Asn) SRY May 01, 2000 MedGen:C2748896,OMIM:400044 46,XY sex reversal, type 1 germline Y 2787551 TGTTAAGCGTATTCAACAGCGATGATTACAGTCCAGCTGTGCAAGAGAATATTCCCGCTCT 113994136 33344 NM_139276.2(STAT3):c.1145G>A (p.Arg382Gln) STAT3 Jun 07, 2012 MedGen:C0022398,OMIM:147060,SNOMED CT:50926003 Hyperimmunoglobulin E syndrome germline 17 42329642 AGTTGATTGTTCCCCTGTGATTCAGATCCCGGAAATTTAACATTCTGGGCACAAACACAAA 113994108 32460 NM_001845.5(COL4A1):c.2159G>A (p.Gly720Asp) COL4A1 Mar 08, 2011 MedGen:C1843512,OMIM:607595 Brain small vessel disease with hemorrhage germline 13 110181326 CGGGGACTCCAGGTCGCCCGGGATTTAATGGCTTACCTGGGAACCCAGGTGTGCAGGGCCA 28928897 29629 NM_000422.2(KRT17):c.281G>A (p.Arg94His) KRT17 Dec 01, 2001 MedGen:C1721007,OMIM:167210;Human Phenotype Ontology:HP:0012035,MedGen:C0259771,OMIM:184500,Orphanet:ORPHA841,SNOMED CT:109433009;MedGen:CN517202 Pachyonychia congenita 2;Steatocystoma multiplex;not provided germline 17 41624229 AGAAGGCCACCATGCAGAACCTCAATGACCGCCTGGCCTCCTACCTGGACAAGGTGCGTGC 1085307442 414420 NM_001013703.3(EIF2AK4):c.3159G>A (p.K975_K1053del) EIF2AK4 - MedGen:C0340848,OMIM:234810,SNOMED CT:234161007 Familial pulmonary capillary hemangiomatosis germline 15 40001224 CGATTACACCTATGACAGCGACATACTGAAGGTGGGCTTAAGCCACGCTGCACAAAGGGAG -1 426865 NM_001171.5(ABCC6):c.3633+1G>A ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16161437 GTGGGCTTCTCTGTCTCTGCTGCCCTCCAGGTACTCCCCACATCCCCAAACTGGGCTTGAG 533916138 18258 NM_013382.5(POMT2):c.1006+1G>A POMT2 Dec 10, 2015 MedGen:C3150411,OMIM:613150;MedGen:C3150418,OMIM:613158,Orphanet:ORPHA206559 Congenital muscular dystrophy-dystroglycanopathy with brain and eye anomalies, type A2;Limb-girdle muscular dystrophy-dystroglycanopathy, type C2 germline 14 77298688 ACAACCTGCACAATGCTTCCATCCCTGAACGTGAGTGTCTCTGGGCCATTACAAAGGTAGA 786203954 182800 NM_000535.6(PMS2):c.354-1G>A PMS2 Dec 26, 2014 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 7 6002637 TGAACACACCATGCCTGGTATTCTCTCACAGCGATGTCACCATTTCTACCTGCCACGCATC 121909121 22410 NM_001083962.1(TCF4):c.1739G>A (p.Arg580Gln) TCF4 Oct 27, 2017 MedGen:C1970431,OMIM:610954,Orphanet:ORPHA2896;MedGen:CN517202 Pitt-Hopkins syndrome;not provided germline 18 55228987 GGATGGCCAACAATGCCCGAGAGCGTCTGCGGGTCCGTGACATCAACGAGGCTTTCAAAGA 121434302 20521 NM_006329.3(FBLN5):c.1087G>A (p.Ala363Thr) FBLN5 Jun 01, 2011 MedGen:C1837187,OMIM:608895 Age-related macular degeneration 3 germline 14 91877585 ATGGACGTGGTGTCAGGACGCTCCGTTCCCGCTGACATCTTCCAAATGCAAGCCACGACCC 63750499 95540 NM_000249.3(MLH1):c.2136G>A (p.Trp712Ter) MLH1 Sep 05, 2013 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Lynch syndrome germline 3 37050518 TGAAGTGCCTGGCTCCATTCCAAACTCCTGGAAGTGGACTGTGGAACACATTGTCTATAAA 80358041 70194 NM_007294.3(BRCA1):c.5332+1G>A BRCA1 Jun 14, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline 17 43051062 GCTATGGGCCCTTCACCAACATGCCCACAGGTAAGAGCCTGGGAGAACCCCAGAGTTCCAG 373517016 446763 NM_002637.3(PHKA1):c.2606+1G>A PHKA1 Oct 16, 2017 MedGen:CN517202 not provided germline X 72609623 TCCAGAACCTCGAGAAAAGACTATCTCTGCGTGAGTATGGCTGGGTTTGGTCAGGCTTCTC 1060502726 401513 NM_024675.3(PALB2):c.2711G>A (p.Trp904Ter) PALB2 Aug 11, 2017 MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Familial cancer of breast;Hereditary cancer-predisposing syndrome;not provided germline 16 23626273 TAGTTTCTCTTTGGAAAGCTCTGGATGCTTGGCAGTGGGAAAAACTTTATACCTGGCACTT 121908548 20944 NM_000334.4(SCN4A):c.4765G>A (p.Val1589Met) SCN4A Jul 29, 2015 MedGen:C1868617,OMIM:168300;MedGen:C0752355,OMIM:608390,Orphanet:ORPHA99734;MedGen:CN517202 Paramyotonia congenita of von Eulenburg;Potassium aggravated myotonia;not provided germline 17 63941517 TGCAGCTATATCATCATCTCCTTCCTCATCGTGGTCAACATGTACATCGCCATCATCCTGG 143493067 439218 NM_016327.2(UPB1):c.917-1G>A UPB1 May 08, 2017 MedGen:CN517202 not provided germline 22 24523618 CTCACAGATGTGTTTCTTTGTTCCTTTAAAGCTCACCAGGACTTTGGCTACTTTTATGGCT 28942080 18735 NM_000527.4(LDLR):c.1567G>A (p.Val523Met) LDLR Mar 30, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000;MedGen:CN118841;MedGen:CN517202 Familial hypercholesterolemia;Familial hypercholesterolemias;not provided germline;inherited;not applicable 19 11113743 AGGGAGAACGGCTCCAAGCCAAGGGCCATCGTGGTGGATCCTGTTCATGGGTGCGTATCCA 587783696 168908 NM_003482.3(KMT2D):c.15195G>A (p.Trp5065Ter) KMT2D Feb 08, 2013 MedGen:CN030661,OMIM:147920 Kabuki syndrome 1 germline 12 49026771 CCTGTGGGTGCACCTCAACTGTGCCCTTTGGTCCACGGAGGTGTATGAGACCCAGGGCGGG 587777292 132051 NM_173086.4(KRT6C):c.1414G>A (p.Glu472Lys) KRT6C Jul 21, 2017 MedGen:C3810394,OMIM:615735,Orphanet:ORPHA402003;MedGen:CN517202 Palmoplantar keratoderma, nonepidermolytic, focal or diffuse;not provided germline 12 52469680 ATCGCCACCTACCGCAAGCTGCTGGAGGGCGAGGAGTGCAGGTAGGTAACTGACGCGACTT 143670942 444843 NM_005609.3(PYGM):c.2178-1G>A PYGM Feb 19, 2016 MedGen:CN517202 not provided germline 11 64747359 CGGGGAGCTGACCACAGCTCTGTCCTGGCAGGTACAATGCCCAGGAGTACTACGATCGCAT 398122822 48057 NM_001111.4(ADAR):c.3019G>A (p.Gly1007Arg) ADAR Apr 28, 2017 MedGen:C3539013,OMIM:615010;MedGen:C0406775,OMIM:127400,Orphanet:ORPHA41,SNOMED CT:239085000 Aicardi-goutieres syndrome 6;Symmetrical dyschromatosis of extremities de novo;germline 1 154588125 CAAGGAAAGCTCCGCACCAAGGTGGAGAACGGTGAGTGATACATGCCCCCGCCTCCTTTCC 780595770 481674 NM_007208.3(MRPL3):c.629+1G>A MRPL3 Jan 12, 2018 MedGen:CN517202 not provided germline 3 131487679 AGGACAGTATGTGGATGTCACAGCCAAAACGTAGGTCCTCATAGCGAGTTCTCTTTTCCTT 397517436 55536 NM_032119.3(ADGRV1):c.7406G>A (p.Trp2469Ter) ADGRV1 Jan 30, 2013 MedGen:C1854237,OMIM:605472 Usher syndrome, type 2C germline 5 90694162 AGGGTCCCCAGTGTTTCTGGATGACATCATGGATCAGCCCAGCTGTCAACAATTCAGACTT 121909518 33353 NM_001458.4(FLNC):c.8130G>A (p.Trp2710Ter) FLNC Feb 03, 2012 MedGen:C1836050,OMIM:609524,Orphanet:ORPHA171445 Myofibrillar myopathy, filamin C-related germline 7 128858475 GAAAGGGGACTACATCCTCATTGTCAAGTGGGGTGACGAAAGTGTCCCTGGAAGCCCCTTC 398122816 40268 NM_004285.3(H6PD):c.960G>A (p.Val320=) H6PD Oct 01, 2008 MedGen:C3551716,OMIM:604931 Cortisone reductase deficiency 1 germline 1 9262273 GGGCCAGTACCAGTCTTACAGTGAGCAGGTGCGCAGAGAGCTGCAGAAGCCAGACAGCTTC 587777467 143144 NM_006087.3(TUBB4A):c.5G>A (p.Arg2Gln) TUBB4A Mar 23, 2017 MedGen:C2676244,OMIM:612438,Orphanet:ORPHA139441;MedGen:CN517202 Leukodystrophy, hypomyelinating, 6;not provided germline 19 6502208 CCGCGTCCACCCTCAGCGCCACCGCCATGCGGGAGATCGTGCACCTGCAGGCCGGCCAGTG 398123909 100437 NM_004006.2(DMD):c.2804-1G>A DMD Nov 01, 2012 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009;MedGen:C3668940,OMIM:302045;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Becker muscular dystrophy;Dilated cardiomyopathy 3B;Duchenne muscular dystrophy germline X 32472310 GATTCTCATTCTTTTTTCCCTTTTGATAAAGTTTTTGACACTTTGCCACCAATGCGCTATC 267606676 17787 NM_004183.3(BEST1):c.682G>A (p.Asp228Asn) BEST1 Apr 22, 2016 MedGen:C2750788,OMIM:613194;MedGen:C2750789;MedGen:CN517202 Retinitis pigmentosa 50;Retinitis pigmentosa, concentric;not provided germline 11 61957432 CGTACTCAGTGTGGACACCTGTATGCCTACGACTGGATTAGTATCCCACTGGTGTATACAC 587777706 165720 NM_014753.3(BMS1):c.2789G>A (p.Arg930His) BMS1 Jun 01, 2013 Human Phenotype Ontology:HP:0001057,MedGen:C0282160,OMIM:107600,Orphanet:ORPHA1114 Aplasia cutis congenita germline 10 42820527 CGTCCCCTCAGATGCGTCTGAAGAAACATCGCTGGTATAAGAAAATCCTCAAGTCCCGAGA 137852537 24992 NM_000291.3(PGK1):c.959G>A (p.Ser320Asn) PGK1 Feb 01, 2006 MedGen:C1970848,OMIM:300653,Orphanet:ORPHA713 Phosphoglycerate kinase 1 deficiency germline X 78124896 CCCCTCAGGGCTTGGACTGTGGTCCTGAAAGCAGCAAGAAGTATGCTGAGGCTGTCACTCG 769567624 199876 NM_004341.4(CAD):c.1843-1G>A CAD Jun 01, 2015 MedGen:C4225320,OMIM:616457,Orphanet:ORPHA448010 Epileptic encephalopathy, early infantile, 50 germline 2 27226130 GCAGTGACCTCCATGGCACCCCCCTTCACAGGTGTGTAACATGGAGAACTTGGACCCACTG 1131691065 420756 NM_003002.3(SDHD):c.314G>A (p.Trp105Ter) SDHD Dec 15, 2015 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 11 112089011 TGGCTGCAGCCCTCACTCTTCATGGTCACTGGCAAGTATAGCAATTCCAAATATAGTTGTC 377767405 36250 NM_020630.4(RET):c.1889G>A (p.Cys630Tyr) RET Dec 04, 2012 na MEN2A and Unclassified not provided 10 43114489 TCACACCACCCCCACCCACAGATCCACTGTGCGACGAGCTGTGCCGCACGGTGATCGCAGC 145787161 18783 NM_000527.4(LDLR):c.2140+1G>A LDLR Jan 19, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11120523 TGGCCAGGGACATGAGGAGCTGCCTCACAGGTGTGGCACACGCCTTGTTTCTGCGTCCTGT 398122984 97339 NM_003239.4(TGFB3):c.1226G>A (p.Cys409Tyr) TGFB3 Aug 01, 2013 MedGen:C3810012,OMIM:615582 Loeys-Dietz syndrome 5 germline 14 75959200 AGCAGCTCTCCAACATGGTGGTGAAGTCTTGTAAATGTAGCTGAGACCCCACGTGCGACAG 397514668 49383 NM_000557.4(GDF5):c.1139G>A (p.Arg380Gln) GDF5 May 01, 2008 Human Phenotype Ontology:HP:0009372,MedGen:C1832702,OMIM:112600,Orphanet:ORPHA93396 Type A2 brachydactyly germline 20 35434276 ATGAGTACCTGTTCAGCCAGCGGCGAAAACGGCGGGCCCCACTGGCCACTCGCCAGGGCAA 397507979 262842 NM_000059.3(BRCA2):c.8332-1G>A BRCA2 Oct 02, 2015 MedGen:C2675520,OMIM:612555 Breast-ovarian cancer, familial 2 germline 13 32370401 ACTAAATCAATATATTTATTAATTTGTCCAGATTTCTGCTAACAGTACTCGGCCTGCTCGC 104894567 27044 NM_000151.3(G6PC):c.328G>A (p.Glu110Lys) G6PC May 01, 1996 MedGen:C2919796,OMIM:232200 Glycogen storage disease type 1A germline 17 42904028 CCCCTGATAAAGCAGTTCCCTGTAACCTGTGAGACTGGACCAGGTAAGCGTCCCAGCCCCT 587777709 359705 NM_181523.2(PIK3R1):c.1425+1G>A PIK3R1 Dec 04, 2017 MedGen:C4014934,OMIM:616005;MedGen:CN517202 Immunodeficiency 36;not provided germline 5 68293835 TTATATGAAGAATATACCCGCACATCCCAGGTGAGTTTTCTATGAAAATCAGATTAAAAAA 587779573 107030 NM_000090.3(COL3A1):c.1923+1G>A (p.Gly624_Gln641del) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188997754 ACAGGACCCCCTGGTCCACAAGGATTACAAGTAAGAACTTGTTATTTAAATGTCACGGCAT 397516171 52103 NM_000257.3(MYH7):c.2788G>A (p.Glu930Lys) MYH7 Mar 24, 2017 MedGen:CN230736;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Cardiovascular phenotype;Primary familial hypertrophic cardiomyopathy;not provided germline 14 23424041 AAGGAGATGAACGAGAGGCTGGAGGATGAGGAGGAGATGAATGCTGAGCTCACTGCCAAGA 886039726 260182 NM_000088.3(COL1A1):c.3479G>A (p.Gly1160Asp) COL1A1 May 01, 2017 MedGen:CN517202;MedGen:CN169374 not provided;not specified germline 17 50187067 CTGGCAAAGATGGACTCAACGGTCTCCCTGGCCCCATTGGGCCCCCTGGTCCTCGCGGTCG 398124479 102283 NM_138694.3(PKHD1):c.2407+1G>A PKHD1 Sep 13, 2012 MedGen:C0085548,OMIM:263200,Orphanet:ORPHA731,SNOMED CT:28770003 Autosomal recessive polycystic kidney disease germline 6 52048491 GCATCCAGCTTCCTAATACAGTGATTTCTGGTAAAGGGGTGATTGGGGTTGCAACAATTCT 397515427 48444 NM_001410.2(MEGF8):c.4496G>A (p.Arg1499His) MEGF8 Nov 02, 2012 MedGen:C3554247,OMIM:614976 Carpenter syndrome 2 germline 19 42356848 CCGAGGACGGGGGCCCAGGCCCATCGCCCCGCTCCTTCCATGCAGCCGCATATGTGCCCGC 77829017 19335 NM_001005741.2(GBA):c.254G>A (p.Gly85Glu) GBA Jan 01, 1996 MedGen:C1961835,OMIM:230800,SNOMED CT:62201009 Gaucher's disease, type 1 germline 1 155239939 CCTTCAGCCGCTATGAGAGTACACGCAGTGGGCGACGGATGGAGCTGAGTATGGGGCCCAT 137852884 17836 NM_032520.4(GNPTG):c.333G>A (p.Trp111Ter) GNPTG Jul 05, 2012 MedGen:C1854896,OMIM:252605,Orphanet:ORPHA423470 Mucolipidosis III Gamma germline 16 1362053 CCCGTGTCTCCCCAGCATCTGGCACGAGTGGGAGATCGCCAACAACACCTTCACGGGCATG 121434451 22379 NM_005144.4(HR):c.3034G>A (p.Asp1012Asn) HR Oct 01, 2002 MedGen:C1859877,OMIM:203655 Alopecia universalis congenita germline 8 22119227 GGGACCAAGAACCTCTGTGTGGAGGTGGCCGACCTGGTCAGCATCCTGGTGCATGCCGACA 80359003 67069 NM_000059.3(BRCA2):c.7757G>A (p.Trp2586Ter) BRCA2 Jun 09, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline 13 32357881 GAAAAGGAATACAGTTGGCTGATGGTGGATGGCTCATACCCTCCAATGATGGAAAGGCTGG 879255585 205714 NM_001830.3(CLCN4):c.823G>A (p.Val275Met) CLCN4 Mar 22, 2016 MedGen:CN232948;MedGen:CN517202 CLCN4-related disorder;not provided de novo;germline X 10206756 TCTGTTGCCTTTGGTGCACCAATTGGAGGCGTGCTTTTCAGTCTAGAAGAGGTGAGAATGG 869025612 224870 NM_177987.2(TUBB8):c.900G>A (p.Met300Ile) TUBB8 Jan 21, 2016 MedGen:C4225210,OMIM:616780 Oocyte maturation defect 2 germline 10 47492 CCAGCAGATGTTTGATGCTAAGAACATGATGGCTGCCTGTGACCCCCGTCACGGCCGCTAC -1 482103 NM_001297.4(CNGB1):c.315G>A (p.Trp105Ter) CNGB1 Nov 21, 2017 MedGen:CN517202 not provided germline 16 57963040 TCGCAGTCCCAGCCGCAGGGTACTGACCTGGCTCATGAAGGGCGTAGAGAAGGTGATCCCG 137854618 24440 NM_198056.2(SCN5A):c.3823G>A (p.Asp1275Asn) SCN5A Feb 08, 2017 MedGen:C3151464,OMIM:614022;MedGen:C4016652;MedGen:C1142166,Orphanet:ORPHA130,SNOMED CT:418818005;MedGen:C1832680,OMIM:601154;MedGen:CN517202 Atrial fibrillation, familial, 10;Atrial standstill 1, digenic;Brugada syndrome;Dilated cardiomyopathy 1E;not provided germline 3 38566426 AAGTACTTCACCAATGCCTGGTGCTGGCTCGACTTCCTCATCGTAGACGTGAGTGTGGGCA -1 442720 NM_003238.4(TGFB2):c.932+1G>A TGFB2 Jul 19, 2017 MedGen:CN517202 not provided germline 1 218436148 GCGTGCTTTGGATGCGGCCTATTGCTTTAGGTAAAGGAAAGAAAAGTAAAACCAAGTAATT 72554652 26827 NM_000052.6(ATP7A):c.3056G>A (p.Gly1019Asp) ATP7A Feb 08, 2013 MedGen:C0022716,OMIM:309400,Orphanet:ORPHA565,SNOMED CT:59178007 Menkes kinky-hair syndrome germline X 78029389 CAACTGCTGTGATGGTGGGTACAGGAGTAGGTGCTCAAAATGGCATACTAATAAAAGGTGG -1 426789 NM_001171.5(ABCC6):c.4341G>A (p.Trp1447Ter) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16150640 GCTGCAGATGCAGGCCATGCTCGGGAGCTGGTTTGCACAGTGCACTGTGCTGCTCATTGCC 397515890 179334 NM_000256.3(MYBPC3):c.1188G>A (p.Trp396Ter) MYBPC3 Aug 31, 2011 MedGen:CN517202 not provided germline 11 47343527 ACTGGCTGACCATGACGCTGAGGTCAAATGGCTCAAGAATGGCCAGGAGATCCAGATGAGC 121912837 32478 NM_000094.3(COL7A1):c.6724G>A (p.Gly2242Arg) COL7A1 Jun 01, 1999 MedGen:C2675780 Epidermolysis bullosa pruriginosa, autosomal dominant germline 3 48573047 ATCCGACTTGTTCTCCGTCAGGGTCCACAGGGGTCTCCAGGTTTGCCTGGACAAGTGGTGA 397514469 38996 NM_001165899.1(PDE4D):c.1835G>A (p.Gly612Asp) PDE4D Apr 06, 2012 MedGen:C3553250,OMIM:614613 Acrodysostosis 2, with or without hormone resistance germline 5 58975076 TCATACTGGATTTTTTTCTTAACTAGGTGGGCTTCATAGACTATATTGTTCATCCCCTCTG -1 440225 NM_015359.5(SLC39A14):c.512G>A (p.Gly171Glu) SLC39A14 Mar 13, 2017 MedGen:C4310765,OMIM:617013 Hypermanganesemia with dystonia 2 germline 8 22410000 TCTCACTGATTAACCTGGCCTCTCTCCTGGGAGTCCTCGTCCTGCCCTGCACAGAGAAAGC 267607853 95322 NM_000249.3(MLH1):c.1731+1G>A MLH1 Aug 01, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Hereditary cancer-predisposing syndrome;Lynch syndrome germline 3 37042332 TTTGCCAATTTTGGTGTTCTCAGGTTATCGGTAAGTTTAGATCCTTTTCACTTCTGAAATT 1131692258 424471 NM_001005463.2(EBF3):c.486-1G>A EBF3 Jul 11, 2017 MedGen:CN517202 not provided germline 10 129957327 ATTAAAACCACTGTTTACAATTGCTCCACAGCCGGTGCTGTGACAAGAAAAGTTGTGGCAA 189315801 481387 NM_000147.4(FUCA1):c.564G>A (p.Trp188Ter) FUCA1 Nov 08, 2017 MedGen:C0016788,OMIM:230000,Orphanet:ORPHA349,SNOMED CT:64716005 Fucosidosis germline 1 23863232 CTATGGACTATACCACTCACTCTTAGAGTGGTTCCATCCACTCTATCTACTTGATAAGAAA 1057517542 358917 NM_004360.4(CDH1):c.2296-1G>A CDH1 Aug 17, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1708349,OMIM:137215,Orphanet:ORPHA26106 Hereditary cancer-predisposing syndrome;Hereditary diffuse gastric cancer germline;unknown 16 68829653 TTCATTGTACTTCAACCTTTTTTCTCCAAAGGACTTTGACTTGAGCCAGCTGCACAGGGGC 148311934 44907 NM_000162.3(GCK):c.676G>A (p.Val226Met) GCK Oct 11, 2017 MedGen:C1841962,OMIM:125851;MedGen:CN517202 Maturity-onset diabetes of the young, type 2;not provided germline 7 44149763 GAAGACCATCAGTGCGAGGTCGGCATGATCGTGGGTAAGGGCTCCTTGCACCCCTGCCCCT 61752391 104933 NM_000350.2(ABCA4):c.1317G>A (p.Trp439Ter) ABCA4 Jan 26, 2017 MedGen:CN517202 not provided germline 1 94078629 AGCCTGGGAAGAAGTAGGGCCCCAGATCTGGTACTTCTTTGACAACAGCACACAGATGAAC 863225129 214164 NM_016434.3(RTEL1):c.1482-1G>A RTEL1 Jun 16, 2016 MedGen:C0265965,Orphanet:ORPHA1775,SNOMED CT:74911008;MedGen:C1800706,OMIM:178500,Orphanet:ORPHA79126,SNOMED CT:28168000 Dyskeratosis congenita;Idiopathic fibrosing alveolitis, chronic form germline;inherited 20 63687936 CCCACTGTCTGCTCCCTCTGGCCACGCTCAGCCCTTTCCCAGTCTGCCTGGAGAACCCACA 104893867 15534 NM_000320.2(QDPR):c.270G>A (p.Trp90Ter) QDPR Dec 01, 2000 MedGen:C0268465,OMIM:261630,Orphanet:ORPHA226,SNOMED CT:58256000 Dihydropteridine reductase deficiency germline 4 17504404 GGATGCAATTCTTTGCGTTGCTGGAGGATGGGCCGGGGGCAATGCCAAATCCAAGTGTGAG 1131690859 420550 NM_000321.2(RB1):c.1389+5G>A RB1 Oct 29, 2015 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 13 48379655 GAGTAATGGAATCCATGCTTAAATCAGTAAGTTAAAAACAATATAAAAAAATTTCAGCCGG 121964955 40255 NM_004453.3(ETFDH):c.524G>A (p.Arg175His) ETFDH Dec 01, 2010 MedGen:C3278156 Glutaric acidemia IIC germline 4 158685137 CAATGAATAATCATGGCAATTACATTGTACGCTTGGGACATTTAGTGAGCTGGATGGGCGA -1 454864 NM_003060.3(SLC22A5):c.1172G>A (p.Trp391Ter) SLC22A5 Nov 06, 2016 MedGen:C0342788,OMIM:212140,Orphanet:ORPHA158,SNOMED CT:21764004 Renal carnitine transport defect germline 5 132390809 TGGTTGAAGTCCCAGCATATGTGTTGGCCTGGCTGCTGCTGCAATATTTGCCCCGGCGCTA 199476129 24708 m.5920G>A MT-CO1 Sep 12, 2000 Human Phenotype Ontology:HP:0003652,MedGen:C1838877,OMIM:550500 Myoglobinuria, recurrent germline MT 5920 CCTCACCCCCACTGATGTTCGCCGACCGTTGACTATTCTCTACAAACCACAAAGACATTGG 1131690882 420575 NM_000321.2(RB1):c.2325+1G>A RB1 Feb 19, 2015 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 13 48465112 ACAAATATTTTGCAGTATGCTTCCACCAGGGTAGGTCAAAAGTATCCTTTGATTGGAAAAA 137853118 16450 NM_031955.5(SPATA16):c.848G>A (p.Arg283Gln) SPATA16 Oct 01, 2007 Human Phenotype Ontology:HP:0012205,MedGen:C0403825,OMIM:102530,SNOMED CT:236818008 Globozoospermia germline 3 173019486 GATGTCTGGAGAGGTATTCAGAGGCTGCCCGGTATGTTTGTTTTAACTTTTGTGAGGATTT 104894809 25467 NM_002049.3(GATA1):c.647G>A (p.Arg216Gln) GATA1 Apr 17, 2014 MedGen:C1839161,OMIM:314050,Orphanet:ORPHA231393 Thrombocytopenia, platelet dysfunction, hemolysis, and imbalanced globin synthesis germline X 48792371 ACTGCGGAGCAACAGCCACTCCACTGTGGCGGAGGGACAGGACAGGCCACTACCTATGCAA 397514913 75818 NM_000548.4(TSC2):c.2688G>A (p.Trp896Ter) TSC2 Feb 08, 2016 MedGen:C1860707,OMIM:613254;MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000 Tuberous sclerosis 2;Tuberous sclerosis syndrome germline 16 2076116 GTGTCTGGCCCATCACGTCATAGCCATGTGGTTCATCAGGTGCCGCCTGCCCTTCCGGAAG 886044326 274231 NM_022455.4(NSD1):c.6152-1G>A NSD1 Aug 22, 2016 MedGen:CN035106,OMIM:117550 Sotos syndrome 1 germline 5 177288818 GATATTAATATTTTCACGGTCTCTTATGCAGGCACTGAACTTACCTTCAACTACAACCTAG 886042442 266872 NM_213599.2(ANO5):c.2235+1G>A ANO5 Sep 16, 2015 MedGen:C2750076,OMIM:613319,Orphanet:ORPHA399096 Miyoshi muscular dystrophy 3 germline 11 22272990 GGAATGGCTGTCCTTTCTGTTGCAACTAATGTAAGTGGACCTATTTCGGTGGGGTGACTTT 121918258 16927 NM_000255.3(MUT):c.643G>A (p.Gly215Ser) MUT Jan 07, 2016 MedGen:C1855115;MedGen:C1855114,OMIM:251000 METHYLMALONIC ACIDURIA, mut(0) TYPE;Methylmalonic aciduria due to methylmalonyl-CoA mutase deficiency germline 6 49457801 GAACAAGGTGTACCTAAAGAGAAGCTTACTGGTACCATCCAAAATGATATACTAAAGGAAT 372966991 192190 NM_000169.2(GLA):c.335G>A (p.Arg112His) GLA Aug 02, 2016 Human Phenotype Ontology:HP:0001071,MedGen:C0002986,OMIM:301500,Orphanet:ORPHA324,SNOMED CT:16652001 Fabry disease germline X 101403845 CAGAAGGCAGACTTCAGGCAGACCCTCAGCGCTTTCCTCATGGGATTCGCCAGCTAGCTAA 1064796836 411071 NM_000061.2(BTK):c.1185G>A (p.Trp395Ter) BTK Mar 06, 2017 MedGen:CN517202 not provided germline X 101356948 TCACACCAAGACTTTATTGTTAGGATCATGGGAAATTGATCCAAAGGACCTGACCTTCTTG 180177312 200630 NM_012203.1(GRHPR):c.478G>A (p.Gly160Arg) GRHPR Nov 27, 2014 MedGen:C0268165,OMIM:260000,Orphanet:ORPHA93599,SNOMED CT:40951006 Primary hyperoxaluria, type II germline 9 37428557 GGACTCACGCAGAGCACTGTCGGCATCATCGGGCTGGGGCGCATAGGTGAGGCTCCCACCG 786205910 190116 NM_017649.4(CNNM2):c.1069G>A (p.Glu357Lys) CNNM2 Apr 01, 2014 MedGen:C4225333,OMIM:616418 Hypomagnesemia, seizures, and mental retardation germline 10 102919549 GTCTCCACCATCGGTATCGTCATCTTCGGAGAGATCGTGCCCCAGGCCATCTGCTCCCGGC 727503430 174032 NM_000441.1(SLC26A4):c.2089+1G>A SLC26A4 May 03, 2017 Human Phenotype Ontology:HP:0011387,MedGen:C1863752,OMIM:600791;Human Phenotype Ontology:HP:0011387,MedGen:C1863752,OMIM:600791;MedGen:C0271829,OMIM:274600,Orphanet:ORPHA705,SNOMED CT:70348004;MedGen:C0271829,OMIM:274600,Orphanet:ORPHA705,SNOMED CT:70348004;MedGen:CN517202 Enlarged vestibular aqueduct;Enlarged vestibular aqueduct;Pendred's syndrome;Pendred's syndrome;not provided germline;unknown 7 107704386 ATGTGAATGTGTATTTTGCATCACTTCAAGGTAAATACATATATCTACATATCTACCTGTA 121908039 18778 NM_000527.4(LDLR):c.551G>A (p.Cys184Tyr) LDLR Jun 08, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000;MedGen:CN118841 Familial hypercholesterolemia;Familial hypercholesterolemias germline 19 11105457 AAGATGGCTCGGATGAGTGGCCGCAGCGCTGTAGGGGTCTTTACGTGTTCCAAGGGGACAG 879254418 245393 NM_000527.4(LDLR):c.155G>A (p.Cys52Tyr) LDLR Mar 30, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11100310 ACAAGTGGGTCTGCGATGGCAGCGCTGAGTGCCAGGATGGCTCTGATGAGTCCCAGGAGAC 774795340 432290 NM_005630.2(SLCO2A1):c.664G>A (p.Gly222Arg) SLCO2A1 Apr 20, 2017 MedGen:C3280800,OMIM:614441 Primary hypertrophic osteoarthropathy, autosomal recessive 2 germline 3 133953723 TTTGCCATCTCTGTATTTGGACCGGCTTTCGGGTACCTGCTGGGCTCTGTCATGCTGCAGA -1 446837 NM_004218.3(RAB11B):c.202G>A (p.Ala68Thr) RAB11B Dec 15, 2017 MedGen:CN698604,OMIM:617807 NEURODEVELOPMENTAL DISORDER WITH ATAXIC GAIT, ABSENT SPEECH, AND DECREASED CORTICAL WHITE MATTER germline 19 8400024 AAGACCATCAAGGCGCAGATCTGGGACACCGCTGGCCAGGAGCGCTACCGCGCCATCACCT 587776587 19275 NM_031889.2(ENAM):c.534+1G>A ENAM Jan 01, 2012 MedGen:C0399368,OMIM:104500,SNOMED CT:234961008 Amelogenesis imperfecta - hypoplastic autosomal dominant - local germline 4 70635895 TATCAACAACCACCATGGCAAATTCCACAGGTGAGAAATTTTTTTTTCTTTACACTGTAAG 397515907 51711 NM_000256.3(MYBPC3):c.1505G>A (p.Arg502Gln) MYBPC3 Aug 14, 2017 MedGen:CN230736;MedGen:C1861862,OMIM:115197;Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Cardiovascular phenotype;Familial hypertrophic cardiomyopathy 4;Hypertrophic cardiomyopathy;Primary familial hypertrophic cardiomyopathy;not provided germline 11 47342697 AGCTGACCCGGGAGGAGACCTTCAAATACCGGTTCAAGAAGGACGGGCAGAGACACCACCT 376048533 187227 NM_022168.3(IFIH1):c.2465G>A (p.Arg822Gln) IFIH1 Jun 11, 2015 MedGen:C4225427,OMIM:182250;MedGen:CN517202 Singleton-Merten syndrome 1;not provided germline 2 162272377 TGATTTATTTGTGTTTTCAGGCCCGTGGTCGAGCCAGAGCTGATGAGAGCACCTACGTCCT 762374961 358302 NM_000520.5(HEXA):c.1421G>A (p.Trp474Ter) HEXA Jul 19, 2016 MedGen:C0039373,OMIM:272800,Orphanet:ORPHA845,SNOMED CT:111385000 Tay-Sachs disease germline;unknown 15 72346235 TGGACAACACAAACCTGGTCCCCAGGCTCTGGTAAGGGTTTTCGGGGGGGAGGTGGAGGGT 137852414 25256 NM_000132.3(F8):c.1492G>A (p.Gly498Arg) F8 Jan 01, 1995 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154961120 GCAAGCAGACCATATAACATCTACCCTCACGGAATCACTGATGTCCGTCCTTTGTATTCAA 80315385 32672 NM_000719.6(CACNA1C):c.1204G>A (p.Gly402Ser) CACNA1C Feb 24, 2017 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MedGen:C1832916,OMIM:601005,Orphanet:ORPHA65283;MedGen:CN517202 Congenital long QT syndrome;Timothy syndrome;not provided germline 12 2504932 GGGTCATTTTTTGTACTTAACTTGGTTCTCGGTGTGCTTAGCGGGTAAGCAGGACCAAGGA 863223648 210342 NM_000214.2(JAG1):c.439+1G>A JAG1 May 12, 2015 MedGen:CN517202 not provided germline 20 10663962 AGGCGTGGGATTCCAGTAATGACACCGTTCGTAAGTATCGCTTCTGTGGACTTTTCTCTAA 863224030 210949 NM_024996.5(GFM1):c.3G>A (p.Met1Ile) GFM1 Aug 12, 2013 MedGen:CN517202 not provided germline 3 158644637 GGACTTTGACGCGTGCTCTGCGCTTGCCATGAGACTCCTGGGAGCTGCAGCCGTCGCGGCT 121912595 17463 NM_001875.4(CPS1):c.2945G>A (p.Gly982Asp) CPS1 Jan 01, 2007 MedGen:C0751753,OMIM:237300,Orphanet:ORPHA147,SNOMED CT:62522004 Congenital hyperammonemia, type I germline 2 210640045 ATGACCATGGAATGATGGTGCTAGGCTGTGGTCCATATCACATTGGTAAAATAATAAATTA 281865136 49429 NM_000399.4(EGR2):c.1076G>A (p.Arg359Gln) EGR2 Oct 18, 2012 MedGen:C1843247,OMIM:607678,Orphanet:ORPHA101084 Charcot-Marie-Tooth disease, demyelinating, type 1d not provided 10 62813562 GGCGGTTCTCCCGCTCTGACGAGCTGACACGGCACATCCGAATCCACACTGGGCATAAGCC 587779526 106971 NM_000090.3(COL3A1):c.2510G>A (p.Gly837Asp) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189003019 GAGGGGCTCCGGGTGAGAAAGGTGAAGGAGGCCCTCCTGGAGTTGCAGGACCCCCTGGAGG 146973734 39550 NM_020634.2(GDF3):c.584G>A (p.Arg195Gln) GDF3 Jan 15, 2010 MedGen:C3150969,OMIM:613704 Microphthalmia, isolated 7 germline 12 7690389 ATGTAGCTAAGGATTGGAATGACAACCCCCGGAAAAATTTCGGGTTATTCCTGGAGATACT 118192234 34619 NM_172107.3(KCNQ2):c.1658G>A (p.Arg553Gln) KCNQ2 Feb 02, 2017 MedGen:C1852587,OMIM:121200;MedGen:CN517202 Benign familial neonatal seizures 1;not provided germline 20 63413555 GCAGTGTCATGCGGTTCCTGGTGTCCAAGCGGAAGTTCAAGGAGAGCCTGCGGCCCTACGA 1800553 22927 NM_000350.2(ABCA4):c.5882G>A (p.Gly1961Glu) ABCA4 May 05, 2017 MedGen:CN239167;MedGen:C1858806,OMIM:604116;na;Human Phenotype Ontology:HP:0007754,MedGen:C0730292;Human Phenotype Ontology:HP:0000556,MedGen:C0854723,Orphanet:ORPHA71862,SNOMED CT:314407005;MeSH:C535804,MedGen:C1855465,OMIM:248200;MeSH:C535804,MedGen:C1855465,OMIM:248200;MedGen:CN517202 ABCA4-Related Disorders;Cone-rod dystrophy 3;MACULAR DEGENERATION, AGE-RELATED, 2, SUSCEPTIBILITY TO;Macular dystrophy;Retinal dystrophy;Stargardt disease 1;Stargardt disease 1;not provided germline;unknown 1 94008251 CCAGCCCAGCAGTGGACAGGCTGTGTGTCGGAGTTCGCCCTGGAGAGGTGGGTACTCTGCA 397514417 36416 NM_000060.4(BTD):c.1333G>A (p.Gly445Arg) BTD Dec 04, 2012 MedGen:C0220754,OMIM:253260,Orphanet:ORPHA79241,SNOMED CT:8808004 Biotinidase deficiency not provided 3 15645189 AAAGAGCTGTATGCCCTGGGGGTCTTTGATGGGCTTCACACAGTACATGGCACTTACTACA 1064794295 407690 NM_000155.3(GALT):c.899G>A (p.Trp300Ter) GALT Feb 20, 2017 MedGen:CN517202 not provided germline 9 34649076 TTGAGACGTCCTTTCCCTACTCCATGGGCTGGCATGGTGAGGCTTTTCAAGTACCTATATT 119463992 18247 NM_001079802.1(FKTN):c.920G>A (p.Arg307Gln) FKTN May 26, 2009 MedGen:C2751052,OMIM:613152;MedGen:C1969040,OMIM:611588,Orphanet:ORPHA206554 Congenital muscular dystrophy-dystroglycanopathy without mental retardation, type B4;Limb-girdle muscular dystrophy-dystroglycanopathy, type C4 germline 9 105617968 AAAATTTAATCTTCTTTTTAGGATGGTATCGACAATGCAACATTATTCCTTATAGCAAAGA 121908593 28511 NM_002234.3(KCNA5):c.1828G>A (p.Glu610Lys) KCNA5 May 01, 2009 MedGen:C2677106,OMIM:612240 Atrial fibrillation, familial, 7 germline 12 5045975 CTTTATGCCCTCTGCCTGGACACCAGCCGGGAAACAGATTTGTGAAAGGAGATTCAGGCAG 137853147 20542 NM_014244.4(ADAMTS2):c.2384G>A (p.Trp795Ter) ADAMTS2 Oct 18, 2016 MedGen:C2700425,OMIM:225410,Orphanet:ORPHA1901,SNOMED CT:55711009 Ehlers-Danlos syndrome, type vii, autosomal recessive germline;unknown 5 179130005 CCAAAACCTTCATTGCCATGGGCGTGGAGTGGGAGTACAGAGACGAGGACGGCCGGGAGAC 387907125 40129 NM_145239.2(PRRT2):c.950G>A (p.Ser317Asn) PRRT2 Jan 13, 2012 MedGen:C1865926,OMIM:602066,Orphanet:ORPHA31709 Infantile convulsions and paroxysmal choreoathetosis, familial germline 16 29814403 AGCGTCTGGGCCGGGTAGCCAAGCTCTTAAGCATCGTGGCGCTGGTGGGGGGAGTCCTCAT 121907992 18888 NM_000053.3(ATP7B):c.3796G>A (p.Gly1266Arg) ATP7B Apr 20, 2017 MedGen:C0019202,OMIM:277900,Orphanet:ORPHA905,SNOMED CT:88518009 Wilson disease germline 13 51937583 CAGAATAAAGGGAAGAAAGTCGCCATGGTGGGGGATGGGGTCAATGACTCCCCGGCCTTGG 121434524 20741 NM_005977.3(RNF6):c.731G>A (p.Gly244Asp) RNF6 Aug 01, 2002 MedGen:C4016881 Esophageal squamous cell carcinoma, somatic somatic 13 26215151 GGTTAAGAAATGGAATTGGGGGAGCAGCTGGCATTCCTCGAGCTAACGCTTCACGCACTAA 587777285 132030 NM_012338.3(TSPAN12):c.285+1G>A TSPAN12 May 14, 2012 MedGen:C2750079,OMIM:613310 Exudative vitreoretinopathy 5 germline 7 120838776 GTGAAAAGAAATCTGTTGCTTCTTGCATGGGTATGATGTTATATTTTCTCTTTATTATAGT 114025668 17006 NM_000022.3(ADA):c.643G>A (p.Ala215Thr) ADA Aug 01, 1990 MedGen:C1863239;MedGen:C1863236,OMIM:102700,Orphanet:ORPHA277 Partial adenosine deaminase deficiency;Severe combined immunodeficiency due to ADA deficiency germline;unknown 20 44623042 GTGAAGAGCGGCATTCACCGTACTGTCCACGCCGGGGAGGTGGGCTCGGCCGAAGTAGTAA 886041326 264386 NM_000118.3(ENG):c.816G>A (p.Trp272Ter) ENG Sep 29, 2016 MedGen:CN517202 not provided germline 9 127825231 CATCGACGCCAACCACAACATGCAGATCTGGGTGAGTTGTGCGCAGCTCCCGGGACACAAA 549330397 269242 NM_139125.3(MASP1):c.1779G>A (p.Trp593Ter) MASP1 Nov 25, 2015 MedGen:C0796059,OMIM:257920 Michels syndrome germline 3 187236092 CCCCCACATGCTGGGCCTGGTGGCCGGCTGGGGCATCTCCAATCCCAATGTGACAGTGGAT 774730452 246486 NM_000527.4(LDLR):c.2050G>A (p.Ala684Thr) LDLR Dec 16, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11120432 AATGGCGGCTGCCAGTATCTGTGCCTCCCTGCCCCGCAGATCAACCCCCACTCGCCCAAGT 121912583 15602 NM_018344.5(SLC29A3):c.1279G>A (p.Gly427Ser) SLC29A3 Jun 14, 2016 MedGen:C1864445,OMIM:602782,Orphanet:ORPHA168569 Histiocytosis-lymphadenopathy plus syndrome germline 10 71362459 CTCCTCAGCTCCCTGCTGGGGCTCAGCAACGGCTACCTCAGCACCCTGGCCCTCCTCTACG 863225305 214560 NM_001134771.1(SLC12A5):c.1652G>A (p.Gly551Asp) SLC12A5 Sep 03, 2015 MedGen:C4225257,OMIM:616645 Early infantile epileptic encephalopathy 34 germline 20 46045891 GATTGCTCTTTCCCCAGGTCTTTGGCCATGGCAAGGCCAATGGAGAGCCGACCTGGGCCCT 28940882 18716 NM_000403.3(GALE):c.269G>A (p.Gly90Glu) GALE Jan 25, 2011 MedGen:C0751161,OMIM:230350,Orphanet:ORPHA79238,SNOMED CT:8849004 UDPglucose-4-epimerase deficiency germline 1 23798199 ACAGCTTTATGGCGGTCATCCACTTTGCGGGGCTCAAGGCCGTGGGCGAGTCGGTGCAGAA 201954387 377918 NM_174917.4(ACSF3):c.1608G>A (p.Trp536Ter) ACSF3 Jun 02, 2015 MedGen:CN517202 not provided germline 16 89146044 CTCACTGTCCCACAGGGAGCTCAAAGAGTGGGCCAGGTAGGGCTGGGTGGGGCGGGCAGGG 409652 99364 NM_001005741.2(GBA):c.721G>A (p.Gly241Arg) GBA May 08, 2017 MedGen:C0017205,Orphanet:ORPHA355;MedGen:C1961835,OMIM:230800,SNOMED CT:62201009 Gaucher disease;Gaucher's disease, type 1 germline 1 155238174 AATGGGAAGGGGTCACTCAAGGGACAGCCCGGAGACATCTACCACCAGACCTGGGCCAGAT 104893896 32002 NM_002449.4(MSX2):c.515G>A (p.Arg172His) MSX2 Apr 01, 2000 MedGen:C1868599,OMIM:168500 Parietal foramina 1 germline 5 174729294 GTCAGAAACAGTACCTCTCCATTGCAGAGCGTGCAGAGTTCTCCAGCTCTCTGAACCTCAC 587783673 168868 NM_000525.3(KCNJ11):c.685G>A (p.Glu229Lys) KCNJ11 Apr 28, 2014 Human Phenotype Ontology:HP:0000819,MedGen:C0011849,SNOMED CT:73211009 Diabetes mellitus germline 11 17387407 GTGGTACGCAAGACCACCAGCCCCGAGGGCGAGGTGGTGCCCCTCCACCAGGTGGACATCC 3902401 426779 NM_001171.5(ABCC6):c.*17G>A ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16150116 CAGGCCTGGTCTGAGCCAGGACCCTCAACCGTACCCCAGTTGGACCAGCCCGCACAGCCTG 118192125 76890 NM_000540.2(RYR1):c.8816G>A (p.Arg2939Lys) RYR1 May 11, 2010 MedGen:C0751951,OMIM:117000,Orphanet:ORPHA597,SNOMED CT:43152001;MedGen:CN517202 Central core disease;not provided unknown 19 38506952 TCCTGCAGATGAATGGCTACGCGGTTACAAGGCACGCGGGTTGGGGCTCCCGCGGAAGAGC 398122958 94618 NM_006254.3(PRKCD):c.1352+1G>A PRKCD Dec 09, 2013 MedGen:C3809928,OMIM:615559 Autoimmune lymphoproliferative syndrome, type III germline 3 53186696 CAAAGGCCGCTTTGAACTCTACCGTGCCACGTACGTAAGGGCCATGGTGGGGAAGGGCCCA -1 437732 NM_000475.4(NR0B1):c.515G>A (p.Trp172Ter) NR0B1 Oct 05, 2017 MedGen:C0342482,OMIM:300200,SNOMED CT:237764004 Congenital adrenal hypoplasia, X-linked maternal X 30308849 CGCCCGAGGCACGGCCAGGGGGCGCGTGGTGGGACCGCTCCTACTTCGCGCAGAGGCCAGG 587777794 166222 NM_006218.3(PIK3CA):c.1145G>A (p.Arg382Lys) PIK3CA Jan 10, 2013 MedGen:C3554518,OMIM:615108 Cowden syndrome 5 germline 3 179204588 ACACTCAAAGAGTACCTTGTTCCAATCCCAGGTAAGGAAGTATATAGATTTATATTTCCAA 886039246 259333 NM_001242896.1(DEPDC5):c.279+1G>A DEPDC5 Apr 13, 2016 Gene:50987,MedGen:C1858477,OMIM:604364 Epilepsy, familial focal, with variable foci 1 germline 22 31765061 GATGTCTATGTTAATGTCGTAGACCCTAAGGTATGTCTTTGTTTTGTACTTGAATATCTTT 398123219 98471 NM_000169.2(GLA):c.677G>A (p.Trp226Ter) GLA Dec 08, 2015 Human Phenotype Ontology:HP:0001071,MedGen:C0002986,OMIM:301500,Orphanet:ORPHA324,SNOMED CT:16652001 Fabry disease germline X 101398909 ATACAGAAATCCGACAGTACTGCAATCACTGGCGAAATTTTGCTGACATTGATGATTCCTG -1 463112 NM_003482.3(KMT2D):c.16052G>A (p.Arg5351Gln) KMT2D Jun 29, 2017 MedGen:C0796004,Orphanet:ORPHA2322,SNOMED CT:313426007 Kabuki syndrome germline 12 49024578 CAGAGCCTAAAATCCTCACACACTACAAACGGTGAGCTTGTGATGCTGGAGCCAAGGGATG 886039106 258303 NM_003242.5(TGFBR2):c.1178G>A (p.Cys393Tyr) TGFBR2 Jul 06, 2017 MedGen:CN118826,Orphanet:ORPHA91387 Thoracic aortic aneurysm and aortic dissection germline 3 30672361 CCAATATCCTCGTGAAGAACGACCTAACCTGCTGCCTGTGTGACTTTGGGCTTTCCCTGCG 869312034 32243 NM_000090.3(COL3A1):c.3093+1G>A COL3A1 Jul 15, 1990 MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189006260 CCAGGCCGAGATGGATCTCCTGGTGGCAAGGTATAATAAACACATGTGCAATTGATTTGTG 137852931 19077 NM_021978.3(ST14):c.2479G>A (p.Gly827Arg) ST14 Mar 01, 2007 MedGen:C1865595,OMIM:602400 Ichthyosis, congenital, autosomal recessive 11 germline 11 130209734 CGGATCTTCCAGGCCGGTGTGGTGAGCTGGGGAGACGGCTGCGCTCAGAGGAACAAGCCAG 104895311 103489 NM_000431.3(MVK):c.564G>A (p.Trp188Ter) MVK Mar 07, 2016 MedGen:C0398691,OMIM:260920,Orphanet:ORPHA343,SNOMED CT:234538002 Hyperimmunoglobulin D with periodic fever germline 12 109586058 CAAGGAGGATTTGGAGCTAATTAACAAGTGGGCCTTCCAAGGGGAGAGAATGATTCACGGG 28934872 27436 NM_000548.4(TSC2):c.1832G>A (p.Arg611Gln) TSC2 Apr 16, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0751674,OMIM:606690,Orphanet:ORPHA538,SNOMED CT:73017001;MedGen:C1860707,OMIM:613254;MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Lymphangiomyomatosis;Tuberous sclerosis 2;Tuberous sclerosis syndrome;not provided germline;somatic 16 2070571 GCTACACCCTGCCAATCGCGAGCAGCATCCGGCTGCAGGTATGGTGGCTGGGGTTGCGCAG 730882174 181520 NM_002238.3(KCNH1):c.1042G>A (p.Gly348Arg) KCNH1 Jun 01, 2015 Gene:353173,MedGen:CN032818,OMIM:135500 Zimmermann-Laband syndrome 1 de novo;germline 1 210919979 GCCCGTAAGCTGGACCACTACATTGAATATGGAGCTGCTGTGCTGGTCCTGCTGGTGTGTG 879253829 224649 NM_000255.3(MUT):c.415G>A (p.Asp139Asn) MUT - MedGen:C1855114,OMIM:251000 Methylmalonic aciduria due to methylmalonyl-CoA mutase deficiency germline 6 49458029 GCTGGTCAGCAGGGATTATCAGTTGCCTTTGATCTGGCGACACATCGTGGCTATGATTCAG 864622777 222901 NM_000202.7(IDS):c.1181-1G>A IDS Dec 05, 2011 MedGen:C0026705,OMIM:309900,SNOMED CT:70737009 Mucopolysaccharidosis, MPS-II maternal X 149483219 ACCCATTCTGCTCTGTCGCTTCCTGTTTCAGGCAGGCAATCCATGGACCTTGTGGAACTTG 587777516 143248 NM_004771.3(MMP20):c.102G>A (p.Trp34Ter) MMP20 Jan 01, 2008 MedGen:C2675858,OMIM:612529 Amelogenesis imperfecta, hypomaturation type, IIA2 germline 11 102625218 CTCCCTAGTTGCAGCCTCCCCCAGGACCTGGAGGAACAACTACCGCCTCGCACAGGTTTGT 876657388 188151 NM_001957.3(EDNRA):c.907G>A (p.Glu303Lys) EDNRA Apr 02, 2015 MedGen:C4225349,OMIM:616367,Orphanet:ORPHA443995 Mandibulofacial dysostosis with alopecia unknown 4 147539823 TATTTTTTTCTCACTTTCCTTTAGCGTCGAGAAGTGGCAAAAACAGTTTTCTGCTTGGTTG 753594601 247521 NM_007255.2(B4GALT7):c.641G>A (p.Cys214Tyr) B4GALT7 Dec 22, 2017 MedGen:C1869122,OMIM:130070,Orphanet:ORPHA75496 Ehlers-Danlos syndrome progeroid type germline 5 177608540 CCGAGTGACGCTGCTTGTCTCTGTGTCAGTGCAATGGGATGTCCAACCGCTTCTGGGGCTG 869312029 16160 NM_017875.3(SLC25A38):c.277-1G>A SLC25A38 Jun 01, 2009 MedGen:C2673914,OMIM:205950,Orphanet:ORPHA255132 Anemia, sideroblastic, pyridoxine-refractory, autosomal recessive germline 3 39391440 GATTTTCTTTTCTCCCTGACCTTCTCTGCAGTCCATTGTGAGATGTGTCCCTGGCGTTGGA 121909132 22631 NM_000085.4(CLCNKB):c.610G>A (p.Ala204Thr) CLCNKB Oct 01, 1997 MedGen:C1846343,OMIM:607364,Orphanet:ORPHA93605 Bartter syndrome type 3 germline 1 16048537 AAGAGCAAGCAAAACGAAATGCTGGTGGCAGCGGCGGCAGTGGGCGTGGCCACAGTCTTTG 587779511 106955 NM_000090.3(COL3A1):c.2888G>A (p.Gly963Asp) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189004321 CTGGAGCACGGGGTCTTGCAGGACCACCAGGCATGCCAGGTCCTAGGGGAAGCCCTGGCCC 111033670 36482 NM_000155.3(GALT):c.292G>A (p.Asp98Asn) GALT Aug 06, 2014 MedGen:C0268151,OMIM:230400,Orphanet:ORPHA79239,SNOMED CT:124354006 Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase germline 9 34647531 CAGTACGATAGCACCTTCCTGTTTGACAACGACTTCCCAGCTCTGCAGCCTGATGCCCCCA 199474701 24611 m.15967G>A MT-TP Jan 29, 2015 MedGen:CN069287;MedGen:C0162672,OMIM:545000,Orphanet:ORPHA551 MERFF syndrome;Myoclonus with epilepsy with ragged red fibers germline MT 15967 ACCTTTTTCCAAGGACAAATCAGAGAAAAAGTCTTTAACTCCACCATTAGCACCCAAAGCT 863223341 189156 NM_001257965.1(CRB1):c.2711G>A (p.Cys904Tyr) CRB1 Jan 01, 2015 Human Phenotype Ontology:HP:0000547,MeSH:D012174,MedGen:C0035334,OMIM:268000,Orphanet:ORPHA791,SNOMED CT:28835009 Retinitis pigmentosa germline 1 197429555 GTGGGAAAGCCTGTGAGGAGGTTCAGTGGTGTGGATTCAGCCCGTGTCCTCACGGAGCCCA 769284314 240611 NM_012144.3(DNAI1):c.1307G>A (p.Trp436Ter) DNAI1 Feb 23, 2016 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244 Ciliary dyskinesia germline 9 34506870 CCAAGTCTGGCAAGCACTCAGACCCTGTGTGGCAGGTCAGCAACCAGGCTGGGAGGGGTGG 45517252 203150 NM_000548.4(TSC2):c.2639+1G>A TSC2 Dec 06, 2013 MedGen:CN517202 not provided germline 16 2075893 CATCTCCCTGCCGTACACCAACCCCTCCAAGTGAGTGGTCGCCCCAGGCCCTGTGCCTCCC 587776641 21770 NM_003165.3(STXBP1):c.169+1G>A STXBP1 Jun 01, 2009 MedGen:C2677326,OMIM:612164 Early infantile epileptic encephalopathy 4 germline 9 127653797 TGACAGACATCATGACCGAGGGCATAACGAGTGAGCATGCGCTCTGCACTTGAGCAGTGCT 52836744 29738 NM_000208.3(INSR):c.172G>A (p.Gly58Arg) INSR Jan 05, 1992 MedGen:C0265344,OMIM:246200,Orphanet:ORPHA508,SNOMED CT:111307005 Leprechaunism syndrome germline 19 7267825 CATGAGCTGGAGAATTGCTCTGTCATCGAAGGACACTTGCAGATACTCTTGATGTTCAAAA 104894590 16599 NM_000263.3(NAGLU):c.2021G>A (p.Arg674His) NAGLU Nov 12, 2013 MedGen:C0086648,OMIM:252920,Orphanet:ORPHA79270,SNOMED CT:59990008;MedGen:CN517202 Mucopolysaccharidosis, MPS-III-B;not provided germline 17 42544027 CGGGGTTGGTGGCCAACTACTACACCCCTCGCTGGCGGCTTTTCCTGGAGGCGCTGGTTGA 769765227 421583 NM_000434.3(NEU1):c.679G>A (p.Gly227Arg) NEU1 Jul 31, 2017 MedGen:CN203634,Orphanet:ORPHA309294;MedGen:CN517202 Sialidosis;not provided germline 6 31860558 GTGTGTGGCCATGGGACGCTGGAGCGGGACGGAGTCTTCTGTCTCCTCAGCGATGATCATG -1 446643 NM_000531.5(OTC):c.540+265G>A OTC Dec 20, 2016 MedGen:C0268542,OMIM:311250,Orphanet:ORPHA664,SNOMED CT:80908008;MedGen:CN517202 Ornithine carbamoyltransferase deficiency;not provided germline X 38401693 CTTATGTTCTGTCAATCCCTTTGATTTTTCGGTGCCATATTTAACACAATGAATGAATAGA 794726827 194348 NM_001165963.1(SCN1A):c.602+1G>A SCN1A Jun 07, 2017 MedGen:C1858673,OMIM:604403;MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002;MedGen:CN517202 Generalized epilepsy with febrile seizures plus, type 2;Severe myoclonic epilepsy in infancy;not provided germline 2 166054637 CTGGCTCGATTTCACTGTCATTACATTTGCGTAAGTGCCTTTTTTGAAACTTTAAGAGAGA 758452450 224719 NM_000203.4(IDUA):c.223G>A (p.Ala75Thr) IDUA Feb 11, 2016 MedGen:C0023786,Orphanet:ORPHA579 Mucopolysaccharidosis type I germline 4 987873 GTCCTCAGCTGGGACCAGCAGCTCAACCTCGCCTATGTGGGCGCCGTCCCTCACCGCGGCA -1 485853 NM_000044.4(AR):c.2593G>A (p.Asp865Asn) AR Apr 21, 2009 MedGen:C0039585,OMIM:300068,SNOMED CT:12313004 Androgen resistance syndrome germline X 67722970 AGACGCTTCTACCAGCTCACCAAGCTCCTGGACTCCGTGCAGCCTGTAAGCAAACGATGGA 387907225 44202 NM_000076.2(CDKN1C):c.820G>A (p.Asp274Asn) CDKN1C Feb 05, 2013 MedGen:C1846009,OMIM:614732,Orphanet:ORPHA85173 Intrauterine growth retardation, metaphyseal dysplasia, adrenal hypoplasia congenita, and genital anomalies germline 11 2884670 ATCAAGAAGCTGTCCGGGCCTCTGATCTCCGGTGAGCCCCGCACGGCCCCGCCCCGGCCCG 1131692250 424402 NM_015512.4(DNAH1):c.8626-1G>A DNAH1 Jul 20, 2017 MedGen:CN337166,OMIM:617576 SPERMATOGENIC FAILURE 18 germline 3 52386159 GGGAGGACATCCCTATGTCTCCCATCCCCAGGTGGATACGGCCATCGCCGAGGAGACCCGG 797044829 204297 NM_020533.2(MCOLN1):c.1388G>A (p.Cys463Tyr) MCOLN1 Jul 30, 2015 MedGen:C0238286,OMIM:252650,Orphanet:ORPHA578,SNOMED CT:111384001 Mucolipidosis type IV germline 19 7530314 AGTTCCGCTCACTCTCCATGGTGTCTGAGTGCCTGTTCTCGCTCATCAATGGGGACGACAT 730880546 179292 NM_000256.3(MYBPC3):c.1731G>A (p.Trp577Ter) MYBPC3 Dec 05, 2014 MedGen:CN517202 not provided germline 11 47342050 GGTCTCAGATGAGAATGTTCGGGGTGTGTGGCTGAAGAATGGGAAGGAGCTGGTGCCCGAC 772727116 203596 NM_007254.3(PNKP):c.992G>A (p.Trp331Ter) PNKP May 09, 2013 MedGen:CN517202 not provided germline 19 49862408 TCGCCACGCCTGAGGAGTTCTTTCTCAAGTGGCCAGCAGCCGGCTTCGAGCTCCCAGCCTT 121913623 29184 NM_002470.3(MYH3):c.700G>A (p.Ala234Thr) MYH3 May 10, 2017 MedGen:C1834523,OMIM:601680,Orphanet:ORPHA1147;MedGen:CN517202 Distal arthrogryposis type 2B;not provided germline 17 10648592 GCCAATCCCCTGCTGGAGGCCTTTGGGAACGCCAAGACTGTGAGGAATGACAACTCCTCCC 17174393 132920 NM_000051.3(ATM):c.8786+1G>A ATM Oct 27, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Ataxia-telangiectasia syndrome;Hereditary cancer-predisposing syndrome;not provided germline;unknown 11 108353881 CATTACGGGTGTTGAAGGTGTCTTCAGAAGGTAAGTGATATGAAGTAAAGGAGGGAAATAA 368352689 214776 NM_001101.4(ACTB):c.1090G>A (p.Glu364Lys) ACTB Sep 17, 2015 MedGen:C1855722,OMIM:243310,OMIM:608578,Orphanet:ORPHA2995 Baraitser-Winter syndrome 1 germline 7 5527786 CAGATGTGGATCAGCAAGCAGGAGTATGACGAGTCCGGCCCCTCCATCGTCCACCGCAAAT 864622778 222908 NM_000202.7(IDS):c.708+1G>A IDS Dec 07, 2011 MedGen:C0026705,OMIM:309900,SNOMED CT:70737009 Mucopolysaccharidosis, MPS-II maternal X 149498106 AAGCCACACATCCCCTTCAGATACCCCAAGGTGAAGAGCTGGTTGAGGGCTGATCCAGCAC 587777610 153587 NM_198282.3(TMEM173):c.463G>A (p.Val155Met) TMEM173 Aug 13, 2015 MedGen:C4014722,OMIM:615934,Orphanet:ORPHA425120;MedGen:CN517202 Sting-associated vasculopathy, infantile-onset;not provided germline 5 139480847 TCTGCAGTGTGTGAAAAAGGGAATTTCAACGTGGCCCATGGGCTGGCATGGTCATATTACA 118192190 34663 NM_172107.3(KCNQ2):c.296+1G>A KCNQ2 Mar 31, 2016 MedGen:C1852587,OMIM:121200 Benign familial neonatal seizures 1 germline 20 63472167 CGGCTGGGCGTTCATCTACCACGCCTACGTGTGAGTGGCCGGCGGGGCCCCCGTGGCGACC 143010236 76499 NM_000370.3(TTPA):c.358G>A (p.Ala120Thr) TTPA Jun 27, 2013 MedGen:C1848533,OMIM:277460,Orphanet:ORPHA96 Ataxia with vitamin E deficiency not provided 8 63072935 ACTGGCAGCAAAGTTCTTATTTACAGAATCGGTAAGTCATACACAACTCTTTTTTTTTTCT 113993946 25537 NM_000202.7(IDS):c.1403G>A (p.Arg468Gln) IDS Sep 25, 2013 MedGen:C0026705,OMIM:309900,SNOMED CT:70737009;MedGen:C0026705,OMIM:309900,SNOMED CT:70737009;MedGen:C0342841 Mucopolysaccharidosis, MPS-II;Mucopolysaccharidosis, MPS-II;Mucopolysaccharidosis, type II, severe form de novo;germline;maternal;unknown X 149482996 GTGAACTGATTGCCTATAGCCAGTATCCCCGGCCTTCAGACATCCCTCAGTGGAATTCTGA 118192228 34615 NM_172107.3(KCNQ2):c.1525+1G>A KCNQ2 Jan 17, 2017 MedGen:C1852587,OMIM:121200;MedGen:C0393706,Orphanet:ORPHA1934 Benign familial neonatal seizures 1;Early infantile epileptic encephalopathy germline 20 63414902 AGGGTGCCGCGTCACGGCAGAACTCAGAAGGTGGGTGTGGCCGCATCCTCTCCTGGTCCAT 121912819 32549 NM_020549.4(CHAT):c.1679G>A (p.Arg560His) CHAT Feb 13, 2001 MedGen:C0393929,OMIM:254210,SNOMED CT:230670003 Familial infantile myasthenia germline 10 49655139 TGGTGCCCACCTACGAGAGCGCGTCCATCCGCCGATTCCAGGAGGGACGCGTGGACAACAT 111377893 52842 NM_000364.3(TNNT2):c.842+1G>A TNNT2 Dec 22, 2014 MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005 Primary familial hypertrophic cardiomyopathy germline 1 201359622 CCGAAACAGGATCAACGATAACCAGAAAGTGTAAGTGTCTGAGGTCATTCTCGCCTAGCCC 763220502 170948 NM_030777.3(SLC2A10):c.1309G>A (p.Glu437Lys) SLC2A10 Sep 10, 2014 MedGen:C1859726,OMIM:208050,Orphanet:ORPHA3342 Arterial tortuosity syndrome germline 20 46726884 CCCACCCTAGTGACCTGGCTTGTCCTCAGCGAGATCTACCCTGTGGAGATACGAGGAAGAG 104894286 28188 NM_000448.2(RAG1):c.2210G>A (p.Arg737His) RAG1 May 08, 2008 MedGen:C2673536,OMIM:233650,Orphanet:ORPHA157949;MedGen:C1801959,OMIM:603554,Orphanet:ORPHA39041,SNOMED CT:307650006 Combined cellular and humoral immune defects with granulomas;Histiocytic medullary reticulosis germline 11 36575514 TCTACATTTGTACTCTTTGTGATGCCACCCGTCTGGAAGCCTCTCAAAATCTTGTCTTCCA 794729222 198630 NM_152743.3(BRAT1):c.1857G>A (p.Trp619Ter) BRAT1 Dec 02, 2013 MedGen:C3281029,OMIM:614498,Orphanet:ORPHA435845 Rigidity and multifocal seizure syndrome, lethal neonatal germline 7 2538678 GCGGGCGGTCATGCAAGTCTTCACTGAGTGGCTGCGGGACGGCCACGCCGACGCGGCCCAG 281865119 47015 NM_014363.5(SACS):c.10907G>A (p.Arg3636Gln) SACS Oct 11, 2012 MedGen:C1849140,OMIM:270550,Orphanet:ORPHA98 Spastic ataxia Charlevoix-Saguenay type not provided 13 23332969 ATATCCTTCTGCATCATATATTCCAAGAACGAATGGATTTGTTATCTGGAAATTTTCTGAA 886042766 268243 NM_206933.2(USH2A):c.9390G>A (p.Trp3130Ter) USH2A Oct 27, 2015 MedGen:C1848634,OMIM:276901 Usher syndrome, type 2A germline 1 215817177 TCTCTGTTGCAGATCTCTTCAAATTGATTGGGTGTCTCCACGGAAGCCAAATGGCATCATT 137853866 40504 NM_000942.4(PPIB):c.313G>A (p.Gly105Arg) PPIB Dec 07, 2015 MedGen:C1850169,OMIM:259440;MedGen:CN517202 Osteogenesis imperfecta type 9;not provided germline;unknown 15 64160134 CGTGTAATCAAGGACTTCATGATCCAGGGCGGAGACTTCACCAGGGGAGATGGCACAGGAG 80356751 34351 NM_012463.3(ATP6V0A2):c.294+1G>A ATP6V0A2 Sep 23, 2010 MedGen:C0268355,OMIM:219200,Orphanet:ORPHA357058,SNOMED CT:73856006 Cutis laxa with osteodystrophy not provided 12 123722449 CCACCCCTGAAACAGGTTCTAGAAATGCAGGTAACTTGCTTCTGACGAAGCTGGTTGCAGC 104893964 32024 NM_000165.4(GJA1):c.65G>A (p.Gly22Glu) GJA1 Feb 01, 2003 MedGen:C0812437,OMIM:164200 Oculodentodigital dysplasia germline 6 121446912 ACAAGGTTCAAGCCTACTCAACTGCTGGAGGGAAGGTGTGGCTGTCAGTACTTTTCATTTT 119462987 18289 NM_007171.3(POMT1):c.2005G>A (p.Ala669Thr) POMT1 Dec 08, 2016 MedGen:C3150415,OMIM:613155;MedGen:C1836373,OMIM:609308,Orphanet:ORPHA86812;MedGen:CN033898,OMIM:236670;MedGen:CN517202 Congenital muscular dystrophy-dystroglycanopathy with mental retardation, type B1;Limb-girdle muscular dystrophy-dystroglycanopathy, type C1;Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type a, 1;not provided germline 9 131522160 AAGACACTCTTCCTCTACCACTACCTGCCCGCACTCACCTTCCAAATCCTTCTGCTCCCTG 104894378 23032 NM_000192.3(TBX5):c.710G>A (p.Arg237Gln) TBX5 Nov 07, 2017 MedGen:C3542024,OMIM:614823;MedGen:C0265264,OMIM:142900,SNOMED CT:19092004;MedGen:CN517202 Aortic valve disease 2;Holt-Oram syndrome;not provided germline 12 114385521 TTGAGAATAATCCCTTTGCCAAAGGATTTCGGGGCAGTGATGACATGGAGCTGCACAGAAT 1057520664 368310 NM_003722.4(TP63):c.935G>A (p.Cys312Tyr) TP63 Apr 28, 2015 MedGen:CN517202 not provided germline 3 189867885 TCTTGTACAATTTCATGTGTAACAGCAGTTGTGTTGGAGGGATGAACCGCCGTCCAATTTT 398122805 38851 NM_003000.2(SDHB):c.423+1G>A SDHB Jul 24, 2017 MedGen:C1708353,Orphanet:ORPHA29072;MedGen:C0027672,SNOMED CT:699346009;MedGen:C1861848,OMIM:115310;MedGen:CN517202;MedGen:CN169374 Hereditary Paraganglioma-Pheochromocytoma Syndromes;Hereditary cancer-predisposing syndrome;Paragangliomas 4;not provided;not specified germline 1 17028599 CACATGTATGTGATAAAGGATCTTGTTCCCGTGAGTTTCTGCATCTCTCTGGTTTTGTTTT 199497486 259807 NM_001182.4(ALDH7A1):c.312+1G>A ALDH7A1 Feb 09, 2016 MedGen:CN517202 not provided germline 5 126592663 GCAAGAGAAGCATGGAAAATCTGGGCAGATGTAAGTATGGCCTTTGTTTCTAGAATTCAGA 2069566 27739 NM_003235.4(TG):c.6725G>A (p.Arg2242His) TG Aug 01, 2003 MedGen:C0342194,OMIM:274700,SNOMED CT:23536000 Iodotyrosyl coupling defect germline 8 133017940 CATATGCTGCCCCGCCCCTGGCAGAGAGGCGCTTCCAGGCACCAGAGCCCTTGAACTGGAC 397508058 67521 NM_000059.3(BRCA2):c.9501+1G>A BRCA2 Nov 01, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006 Breast-ovarian cancer, familial 2;Familial cancer of breast germline 13 32394934 ACATTCAACAAAATGAAAAATACTGTTGAGGTAAGGTTACTTTTCAGCATCACCACACATT 770269674 207707 NM_003383.4(VLDLR):c.83-1G>A VLDLR Nov 11, 2014 MedGen:CN233038 Cerebellar hypoplasia and mental retardation with or without quadrupedal locomotion 1 germline 9 2635452 TGCTTTACCGAATGTTCCCTTCTTATTCTAGGGAGAAAAGCCAAATGTGAACCCTCCCAAT 111984349 258823 NM_000138.4(FBN1):c.7828G>A (p.Glu2610Lys) FBN1 May 07, 2017 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:CN118826,Orphanet:ORPHA91387;MedGen:CN118826,Orphanet:ORPHA91387 Marfan syndrome;Thoracic aortic aneurysm and aortic dissection;Thoracic aortic aneurysm and aortic dissection germline 15 48415759 CCGCTTCTTATTTTGCCTGCAGATGAAAACGAATGCCTCAGCGCTCACATCTGCGGAGGAG 121909181 23050 NM_001089.2(ABCA3):c.3426G>A (p.Trp1142Ter) ABCA3 Mar 25, 2004 MedGen:C1970456,OMIM:610921,Orphanet:ORPHA440402 Surfactant metabolism dysfunction, pulmonary, 3 germline 16 2285499 TGTGAGTGGAGTCCACGTGGCCAGTTTCTGGCTCTCTGCTCTGCTGTGGGACCTCATCTCC 80338876 34229 NM_003227.3(TFR2):c.64G>A (p.Val22Ile) TFR2 Jun 09, 2011 MedGen:C1858664,OMIM:604250,Orphanet:ORPHA225123 Hemochromatosis type 3 not provided 7 100641198 CAACAACTGTCCCCAAGATCCTCTCAGACCGTCTACCAGCGTGTGGAAGGCCCCCGGAAAG 121434562 31813 NM_003286.3(TOP1):c.1252G>A (p.Glu418Lys) TOP1 Jul 01, 2002 MedGen:C4016020 DNA topoisomerase I, camptothecin-resistant germline 20 41101297 AACAAGGTTACTTGGCTGGTTTCCTGGACAGAGAACATCCAAGGTTCCATTAAATACATCA 1064796877 407118 NM_152743.3(BRAT1):c.1771-1G>A BRAT1 Mar 16, 2017 MedGen:CN517202 not provided germline 7 2538765 CAACCATCCGCACTTGCTCCCTGTCCCCCAGAGCCTGTTCCTGGAGCTCCTGCACATCCTC 796053115 201335 NM_021007.2(SCN2A):c.2635G>A (p.Gly879Arg) SCN2A Dec 11, 2017 MedGen:C3150987,OMIM:613721 Early infantile epileptic encephalopathy 11 de novo 2 165344627 ATGCTAATTAAGATCATTGGCAATTCTGTGGGGGCTCTAGGAAACCTCACCTTGGTATTGG 796051960 200080 NM_004453.3(ETFDH):c.1809G>A (p.Trp603Ter) ETFDH May 06, 2014 MedGen:CN517202 not provided germline 4 158708482 TATTAAAGATCCAAGTCAGAATATTAACTGGGTGGTACCTGAAGGTGGAGGAGGACCTGCT 904122716 360147 NM_000359.2(TGM1):c.1417G>A (p.Gly473Ser) TGM1 Aug 11, 2015 MedGen:CN517202 not provided germline 14 24256063 CCGCCTCACTCTCTAGGCATCTTCTGCTGCGGCCCCTGCTCTGTGGAGTCCATCAAGAATG 56816490 57257 NM_170707.3(LMNA):c.949G>A (p.Glu317Lys) LMNA Jan 23, 2017 MedGen:CN043576;EFO:EFO_0000407,Human Phenotype Ontology:HP:0001644,MedGen:C0007193,Orphanet:ORPHA217604,SNOMED CT:195021004;MedGen:CN517202 Charcot-Marie-Tooth disease, type 2;Primary dilated cardiomyopathy;not provided germline 1 156135913 CCTCCCACCCCCCTTCAGCTGGCAGCCAAGGAGGCGAAGCTTCGAGACCTGGAGGACTCAC -1 433256 NM_000267.3(NF1):c.4514+1G>A NF1 Aug 09, 2017 MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003;MedGen:CN517202;MedGen:CN169374 Neurofibromatosis, type 1;not provided;not specified germline 17 31260516 GAAAATTGGGCAGTATCTTTCCAGCAACAGGTAAGATTTCCCAGTCATGGGGATAGTGAAC 762798018 432468 NM_018116.3(MSTO1):c.22G>A (p.Val8Met) MSTO1 Sep 22, 2017 MedGen:CN484737,OMIM:617675 MYOPATHY, MITOCHONDRIAL, AND ATAXIA germline 1 155610270 CAGCGCAGTATGGCGGGCGGGGCCCGGGAGGTGCTCACACTGCAGTTGGGACATTTTGCCG 886041083 263780 NM_000207.2(INS):c.187+241G>A INS Nov 14, 2016 MedGen:C1833104,OMIM:606176,Orphanet:ORPHA99885 Permanent neonatal diabetes mellitus germline 11 2160544 TTCGGCAGCCCCGAGATACATCAGAGGGTGGGCACGCTCCTCCCTCCACTCGCCCCTCAAA 886037898 248621 NM_015650.3(TRAF3IP1):c.373G>A (p.Val125Met) TRAF3IP1 Sep 06, 2016 MedGen:C4225263,OMIM:616629 Senior-Loken syndrome 9 germline 2 238328704 TTGGACGACAAGCTCTCTAGTGACGATGCGGTGCGGAGGGTTTTAGCTGGAGAGAAGGGAG 113994109 32452 NM_001845.5(COL4A1):c.2245G>A (p.Gly749Ser) COL4A1 Mar 08, 2011 MedGen:CN032791,OMIM:175780 Porencephaly 1 germline 13 110179370 CCGGGACTCAAAGGTTTGCCAGGTCTTCCCGGCATTCCTGGCACACCCGGGGAGAAGGGGA 886042722 268093 NM_206933.2(USH2A):c.14175G>A (p.Trp4725Ter) USH2A Oct 03, 2015 MedGen:C1848634,OMIM:276901 Usher syndrome, type 2A germline 1 215650760 GAATTCTGCAGGAAAAGCCCCCAGTAGCTGGACATGGTGCAGAACCGGGCCAGCCCCACCA 869312702 225871 NM_001005336.2(DNM1):c.139G>A (p.Val47Met) DNM1 Aug 07, 2015 MedGen:C4225357,OMIM:616346 Epileptic encephalopathy, early infantile, 31 de novo 9 128203609 GTGGGCGGCCAGAGCGCCGGCAAGAGCTCGGTGCTCGAGAATTTCGTAGGCAGGTAGGCGC 397515390 39497 NM_003156.3(STIM1):c.970-1G>A STIM1 Oct 25, 2010 MedGen:C2748557,OMIM:612783,Orphanet:ORPHA317430 Immune dysfunction with T-cell inactivation due to calcium entry defect 2 germline 11 4082183 TAAATGAACTCACATCCTTTTGGCTGCCTAGGTTCGGGAGGCCTTGAGGAAAGCAGAGAAG 113993967 21579 NM_003722.4(TP63):c.1010G>A (p.Arg337Gln) TP63 Jun 08, 2010 MedGen:C1863204,OMIM:103285,Orphanet:ORPHA978 ADULT syndrome germline 3 189868597 TTCTAATTCCTAGTGGGCAAGTCCTGGGCCGACGCTGCTTTGAGGCCCGGATCTGTGCTTG 121908115 19242 NM_018972.2(GDAP1):c.719G>A (p.Cys240Tyr) GDAP1 Apr 01, 2009 MedGen:C1842983,OMIM:607831,Orphanet:ORPHA101097 Charcot-Marie-Tooth disease type 2K germline 8 74364009 AATTAGAAGAGGGCCAGCAACCTTGGCTCTGCGGTGAATCCTTCACCCTGGCAGACGTCTC 137852576 24867 NM_000044.4(AR):c.1826G>A (p.Arg609Lys) AR Nov 01, 1993 MedGen:C4016581 Androgen insensitivity, partial, with breast cancer germline X 67686067 GAAATGATTGCACTATTGATAAATTCCGAAGGAAAAATTGTCCATCTTGTCGTCTTCGGAA 121912621 19542 NM_016180.4(SLC45A2):c.469G>A (p.Asp157Asn) SLC45A2 Oct 01, 2005 MedGen:C1847836,OMIM:606574,Orphanet:ORPHA79435 Oculocutaneous albinism type 4 germline 5 33982329 ATAGGTGTCGTTCTCTTTGATTTTGCTGCCGACTTCATTGATGGGCCCATCAAAGCCTACT -1 445820 NM_000088.3(COL1A1):c.1300G>A (p.Gly434Ser) COL1A1 Aug 11, 2017 MedGen:CN517202 not provided germline 17 50195100 CTCAGCTCATCCTCTTCTCCCCCCTTGCAGGGTGAACCTGGTGCTCCTGGCAGCAAAGGAG 797045151 205554 NM_001190787.1(MCIDAS):c.1097G>A (p.Gly366Asp) MCIDAS Sep 03, 2015 MedGen:C0022521,OMIM:244400,Orphanet:ORPHA98861,SNOMED CT:42402006 Kartagener syndrome germline 5 55220427 GCACCATCCGCACCCTCGCCTTCCCCCAGGGCAATGCCTTCACCATCAGAACAGCCAACGG -1 414704 NM_021830.4(TWNK):c.1121G>A (p.Arg374Gln) TWNK Apr 07, 2017 MedGen:C0751651,Orphanet:ORPHA68380;MedGen:CN517202 Mitochondrial diseases;not provided germline 10 100989331 ACAAGTCCATCGTATCTTTCCGGCAGCTTCGGGAGGAGGTGCTAGGAGAACTGTCAAATGT 368438393 187010 NM_000152.4(GAA):c.1933G>A (p.Asp645Asn) GAA Mar 07, 2017 MedGen:C0017921,OMIM:232300,Orphanet:ORPHA365,SNOMED CT:124462004,SNOMED CT:237967002;MedGen:CN517202 Glycogen storage disease, type II;not provided germline;unknown 17 80112920 AACCTGCTGGGGGTGCCTCTGGTCGGGGCCGACGTCTGCGGCTTCCTGGGCAACACCTCAG 863223420 209589 NM_001204.6(BMPR2):c.1128+1G>A BMPR2 Sep 15, 2015 MedGen:C0152171,OMIM:178600,SNOMED CT:26174007;MedGen:CN517202 Primary pulmonary hypertension;not provided germline 2 202530955 GGGGAGGAAGATAATGCAGCCATAAGCGAGGTGAGTGTATACAAAAGGTATCACACTGATG 398122888 45845 NM_018486.2(HDAC8):c.164+5G>A HDAC8 Oct 23, 2012 MedGen:C3550903,OMIM:300882 Cornelia de Lange syndrome 5 germline X 72572052 GCATATGCACTGCATAAGCAGATGAGGTAAGTTGTCTTTCTTGAACATAGCCCTGAAGCTA 121964895 15347 NM_000552.4(VWF):c.3614G>A (p.Arg1205His) VWF Jan 12, 2017 MedGen:CN517202;MedGen:C1264039,OMIM:193400,Orphanet:ORPHA166078,SNOMED CT:128106003;na not provided;von Willebrand disease type 1;von Willebrand factor Vicenza germline 12 6021960 ACTGTCCAGTGTGTGAGGTGGCTGGCCGGCGTTTTGCCTCAGGAAAGAAAGTCACCTTGAA 78970689 197675 NM_000138.4(FBN1):c.5513G>A (p.Gly1838Asp) FBN1 May 07, 2014 MedGen:CN517202 not provided germline 15 48452594 CAGGCAGCTACCGCTGTGACTGTAAGCCCGGCTACCGCTTCACCTCCACAGGACAGTGCAA 104894264 31742 NM_000244.3(MEN1):c.1267G>A (p.Asp423Asn) MEN1 Apr 19, 2017 MedGen:C0027672,SNOMED CT:699346009;MeSH:D018761,MedGen:C0025267,OMIM:131100,Orphanet:ORPHA652,SNOMED CT:30664006 Hereditary cancer-predisposing syndrome;Multiple endocrine neoplasia, type 1 germline 11 64805132 GAGTGCTTCGCCCACCTGCTGCGATTCTACGACGGCATCTGCAAATGGGAGGAGGGCAGTC 121908294 17602 NM_024079.4(ALG8):c.824G>A (p.Gly275Asp) ALG8 Jul 01, 2004 MedGen:C2931002,OMIM:608104,Orphanet:ORPHA79325 Congenital disorder of glycosylation type 1H germline 11 78112724 TCTTTTCCCGACTCTTTCCTTTCAAGAGGGGCCTCTGTCATGCATATTGGGCTCCAAACTT 875989928 228182 NM_000527.4(LDLR):c.1731G>A (p.Trp577Ter) LDLR Mar 25, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline;not applicable 19 11116884 TCTAGATCTCCTCAGTGGCCGCCTCTACTGGGTTGACTCCAAACTTCACTCCATCTCAAGC 730881101 178943 NM_001001430.2(TNNT2):c.422G>A (p.Arg141Gln) TNNT2 Sep 16, 2013 MedGen:CN517202 not provided germline 1 201364335 GGGCAGAGCGGGCCGAGCAGCAGCGCATCCGGAATGAGCGGGAGAAGGAGCGGCAGAACCG 148960463 214847 NM_016218.3(POLK):c.85G>A (p.Glu29Lys) POLK Nov 06, 2013 Human Phenotype Ontology:HP:0012125,MedGen:C0376358,OMIM:176807,SNOMED CT:399068003 Malignant tumor of prostate somatic 5 75547107 ATGGGACTTAATGATAATAAAGCAGGAATGGAAGGATTAGATAAAGAGAAAATTAACAAAA 149390820 106602 NM_024312.4(GNPTAB):c.1774G>A (p.Ala592Thr) GNPTAB - MedGen:C0033788,OMIM:252600,Orphanet:ORPHA423461,SNOMED CT:65764006 Pseudo-Hurler polydystrophy inherited 12 101765143 GACAATCCAATAATTCGACATGCTTCTATTGCCAACAAGTGGAAAACCATCCACCTCATAA 80356503 21445 NM_001457.3(FLNB):c.5071G>A (p.Gly1691Ser) FLNB Oct 09, 2008 MedGen:C0175778,SNOMED CT:63387002;MedGen:C1835564,OMIM:150250 Larsen syndrome;Larsen syndrome, dominant type germline 3 58138491 CCGGGCACATATGTGATCTATGTGCGCTTCGGTGGTGTTGATATTCCTAACAGCCCCTTCA 1057519738 362873 NM_004448.3(ERBB2):c.2524G>A (p.Val842Ile) ERBB2 May 31, 2016 MedGen:C0278701;MedGen:C0235782;MeSH:D015179,MedGen:CN236642;MedGen:C0153574,Orphanet:ORPHA213569;Human Phenotype Ontology:HP:0100013,MeSH:D001943,MedGen:C1458155,Orphanet:ORPHA180250,SNOMED CT:126926005;Human Phenotype Ontology:HP:0006725,MedGen:C0281361;MedGen:C0280630 Adenocarcinoma of stomach;Carcinoma of gallbladder;Colorectal Neoplasms;Malignant neoplasm of body of uterus;Neoplasm of the breast;Pancreatic adenocarcinoma;Uterine Carcinosarcoma somatic 17 39725079 GGGATGAGCTACCTGGAGGATGTGCGGCTCGTACACAGGGACTTGGCCGCTCGGAACGTGC 727503119 179890 NM_002294.2(LAMP2):c.864+1G>A LAMP2 Nov 11, 2013 MedGen:CN517202 not provided germline X 120446304 ATTAAGTATCTAGACTTTGTCTTTGCTGTGGTGAGTAACAGATTTTTTAAAGTTAGGTTCA 398123490 99251 NM_000709.3(BCKDHA):c.1234G>A (p.Val412Met) BCKDHA Aug 25, 2013 MedGen:C0024776,OMIM:248600,SNOMED CT:27718001 Maple syrup urine disease germline 19 41424504 AAACCCAACCCCAACCTACTCTTCTCAGACGTGTATCAGGAGATGCCCGCCCAGCTCCGCA 397508006 67335 NM_000059.3(BRCA2):c.8754+1G>A BRCA2 Apr 19, 2016 MedGen:C2675520,OMIM:612555;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 2;Hereditary cancer-predisposing syndrome germline 13 32376792 AAGAATGCAGCAGACCCAGCTTACCTTGAGGTGAGAGAGTAAGAGGACATATAATGAGGCT 587779474 106913 NM_000090.3(COL3A1):c.2068G>A (p.Gly690Arg) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188999330 CCTGGTGAACGTGGACCTCCTGGATTGGCAGGGGCCCCAGGACTTAGAGGTGGAGCTGGTC 794727139 191636 NM_000440.2(PDE6A):c.1926+1G>A PDE6A Feb 02, 2015 MedGen:C3151139,OMIM:613810 Retinitis pigmentosa 43 germline 5 149884779 GAGTTTGGCAAAACACTGCTCAGAGACGAGGTAGGATGAGGGCCAAGGGTCTACAGGCCGC -1 481159 NM_024887.3(DHDDS):c.192G>A (p.Trp64Ter) DHDDS Jan 24, 2018 na CONGENITAL DISORDER OF GLYCOSYLATION, TYPE 1bb (1 patient) germline 1 26442742 TTGCCTTCTCCCCTCTCAGACTCTGCGGTGGTGTTTGAACCTGGGCATCCTAGAGGTGACA 794728199 197742 NM_000138.4(FBN1):c.2953G>A (p.Gly985Arg) FBN1 Jul 24, 2017 MedGen:CN229799;MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:CN118826,Orphanet:ORPHA91387;MedGen:CN118826,Orphanet:ORPHA91387;MedGen:CN517202 Marfan Syndrome/Loeys-Dietz Syndrome/Familial Thoracic Aortic Aneurysms and Dissections;Marfan syndrome;Thoracic aortic aneurysm and aortic dissection;Thoracic aortic aneurysm and aortic dissection;not provided germline 15 48489980 CACCGCATGGACGCCTGCTGCTGCTCCGTCGGGGCAGCCTGGGGTACTGAGGAATGCGAGG 1060499794 389245 NM_004452.3(ESRRB):c.545G>A (p.Arg182His) ESRRB Jun 04, 2016 MedGen:C1837857,OMIM:608565 Deafness, autosomal recessive 35 germline 14 76482046 GTGTGCGCCTTGATCGAGTGCGTGGAGGCCGTCAGAAATACAAGCGACGGCTGGACTCAGA 398122968 96875 NM_001199107.1(TBC1D24):c.1206+5G>A TBC1D24 Jan 01, 2014 MedGen:C1857345,OMIM:220500 Digitorenocerebral syndrome germline 16 2499425 TGCTCATCAAGACCACGCAGAAGGAGGTGAGCAGGGGCCCTGGAGCCAGGGCTGGCTCTGA 777027944 214552 NM_000532.4(PCCB):c.1210G>A (p.Glu404Lys) PCCB - Human Phenotype Ontology:HP:0003353,MedGen:C0268579,OMIM:606054,Orphanet:ORPHA35 Propionic acidemia germline 3 136327166 AACTCTTCCTCATGTCTAGGCACAGCACAGGAATACGGGGGCATCATCCGGCATGGTGCCA 886041516 264091 NM_015265.3(SATB2):c.1286G>A (p.Arg429Gln) SATB2 Jun 21, 2017 MedGen:CN517202 not provided germline 2 199328798 AGAATTTCCTCAATCTGCCAGAAGTGGAGCGAGATCGCATCTACCAGGATGAGAGGGAGCG 121913509 28901 NM_000222.2(KIT):c.2515G>A (p.Glu839Lys) KIT Jul 14, 2015 Human Phenotype Ontology:HP:0100723,MeSH:D046152,MedGen:C0238198,OMIM:606764,Orphanet:ORPHA44890;MedGen:C4016295 Gastrointestinal stroma tumor;Mastocytosis, sporadic, childhood-onset germline;somatic 4 54736528 GCTCGACTACCTGTGAAGTGGATGGCACCTGAAAGCATTTTCAACTGTGTATACACGTTTG 587779672 107176 NM_000090.3(COL3A1):c.3266G>A (p.Gly1089Asp) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189007510 TTCAAAATATGTTTCTAAAGGGTCCTCAAGGCCCACGTGGTGACAAAGGTGAAACAGGTGA 587777850 166306 NM_004975.3(KCNB1):c.1135G>A (p.Gly379Arg) KCNB1 Oct 01, 2014 MedGen:C4015119,OMIM:616056 Epileptic encephalopathy, early infantile, 26 germline 20 49374425 TGGTGGGCCACCATCACCATGACTACTGTTGGGTATGGAGACATCTACCCCAAGACTCTCC 869312990 226856 NM_000048.3(ASL):c.718+5G>A ASL - MedGen:C0268547,OMIM:207900,Orphanet:ORPHA23,SNOMED CT:41013004 Argininosuccinate lyase deficiency germline 7 66087796 TGCCACTAGTGAGCGGGACTTTGTGGGTGAGTCCTGGGGAGCCAGTCCCCTGCCCTGTGCC 80356692 33904 NM_000083.2(CLCN1):c.937G>A (p.Ala313Thr) CLCN1 May 09, 2016 MedGen:C0027127,Orphanet:ORPHA206973;MedGen:CN517202 Myotonia congenita;not provided germline 7 143330855 TGGAGAGGATTCTTTGCAGCCACGTTCAGCGCCTTTGTGTTTCGAGTGCTGGCAGTGTGGA 397515555 76592 NM_005211.3(CSF1R):c.1958G>A (p.Cys653Tyr) CSF1R Aug 30, 2012 Gene:8156,MedGen:C1857300,OMIM:221820 Hereditary diffuse leukoencephalopathy with spheroids not provided 5 150060873 ACGAGAACATCGTCAACCTTCTGGGAGCCTGTACCCATGGAGGTAAGGGCCTTGGGGTTCC 606231357 22984 NM_000503.5(EYA1):c.966+5G>A EYA1 Mar 01, 2009 MedGen:C0265234,OMIM:113650,Orphanet:ORPHA107,SNOMED CT:290006 Melnick-Fraser syndrome de novo;germline 8 71271753 CACCTCCCCCAGATTCTGATCTTGAGGTACGTCATAGCCAACACCCAAGTGAATAGAAAGG 180177239 186657 NM_000030.2(AGXT):c.568G>A (p.Gly190Arg) AGXT Nov 27, 2014 MedGen:C0268164,OMIM:259900,Orphanet:ORPHA93598,SNOMED CT:65520001 Primary hyperoxaluria, type I germline;unknown 2 240873022 CTCCTGGTGGATTCGGTGGCATCCCTGGGCGGGACCCCCCTTTACATGGACCGGCAAGGTA 72558416 103166 NM_000531.5(OTC):c.622G>A (p.Ala208Thr) OTC Aug 08, 2017 MedGen:CN517202 not provided germline;unknown X 38403699 AACAATATCCTGCACTCCATCATGATGAGCGCAGCGAAATTCGGAATGCACCTTCAGGCAG 886039705 259706 NM_001165963.1(SCN1A):c.3857G>A (p.Trp1286Ter) SCN1A Aug 05, 2016 MedGen:CN517202 not provided germline 2 166012131 ATCAAACATATTTCACCAATGCCTGGTGTTGGCTGGACTTCTTAATTGTTGATGTAGGTAT 769035623 445415 NM_000520.5(HEXA):c.233G>A (p.Trp78Ter) HEXA Nov 02, 2017 MedGen:CN517202 not provided germline 15 72375740 ATCGTGACCTGCTTTTCGGTTCCGGGTCTTGGCCCCGTCCTTACCTCACAGGTGAGTCGGA 179363897 78957 NM_152384.2(BBS5):c.413G>A (p.Arg138His) BBS5 - MedGen:C0752166,OMIM:209900,Orphanet:ORPHA110,SNOMED CT:5619004 Bardet-Biedl syndrome germline 2 169492900 ATAGAGCTTATGAAACTTCTAAAATGTATCGTGATTTTAAATTAAGAAGTGCACTAATTCA 375683615 39197 NM_006225.3(PLCD1):c.1657G>A (p.Ala553Thr) PLCD1 Jun 10, 2011 MedGen:C0544855,OMIM:151600,Orphanet:ORPHA2387 Leukonychia totalis germline 3 38009108 AACGTGGGGCACCTGAGCAGAATCTACCCGGCTGGATGGAGAACAGACTCCTCCAACTACA 200147906 173640 NM_194248.2(OTOF):c.4799+1G>A OTOF Jan 30, 2014 MedGen:CN043648,Orphanet:ORPHA87884 Nonsyndromic hearing loss and deafness germline 2 26465671 CACCTGCGGCATCGCCCAGACCTACTCCACGTATGTGGGGCATGGGGCAGAGGGCGGGGGC -1 424354 NM_001197104.1(KMT2A):c.5803-1G>A KMT2A - MedGen:CN030661,OMIM:147920 Kabuki syndrome 1 de novo 11 118498369 GAATAGGACTCTGTTCTTTTTGGATTTTTAGAGATGTGAATTCTGCCAAAAGCCAGGAGCC 869025631 224916 NM_000551.3(VHL):c.332G>A (p.Ser111Asn) VHL Feb 26, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0019562,OMIM:193300,Orphanet:ORPHA892,SNOMED CT:46659004 Hereditary cancer-predisposing syndrome;Von Hippel-Lindau syndrome germline 3 10142179 TGCCGCCTGGCACGGGCCGCCGCATCCACAGCTACCGAGGTACGGGCCCGGCGCTTAGGCC 869312070 225040 NM_001256850.1(TTN):c.44423-1G>A TTN May 27, 2015 EFO:EFO_0000407,Human Phenotype Ontology:HP:0001644,MedGen:C0007193,Orphanet:ORPHA217604,SNOMED CT:195021004;MedGen:CN517202 Primary dilated cardiomyopathy;not provided germline 2 178613938 ATAACATTTTACACCATTATCCTGTCTATAGATCCACCTGGTCCTCCAACTCGCCTAGAAC -1 425417 NM_021007.2(SCN2A):c.2810G>A (p.Arg937His) SCN2A Jun 08, 2017 MedGen:CN517202 not provided germline 2 165344802 ACTTTTTCCACTCCTTCCTGATCGTGTTCCGCGTGCTGTGTGGAGAGTGGATAGAGACCAT 1064794302 405925 NM_000179.2(MSH6):c.3140G>A (p.Trp1047Ter) MSH6 Feb 14, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline 2 47801123 TCTATAACTTTGATAAAAATTACAAGGACTGGCAGTCTGCTGTAGAGTGTATCGCAGTGTT -1 434182 NM_000527.4(LDLR):c.-172G>A LDLR - MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11089377 CGTTCGAAACTCCTCCTCTTGCAGTGAGGTGAAGACATTTGAAAATCACCCCACTGCAAAC 1057518221 360334 NM_000088.3(COL1A1):c.3208G>A (p.Gly1070Ser) COL1A1 Nov 03, 2016 MedGen:CN517202 not provided germline 17 50188149 AAGAGCTCATGCTTTCCTTGCTCTCCCCAGGGTCCTGCTGGTCCCGCCGGTCCTGTCGGCC 397515626 79353 NM_000394.3(CRYAA):c.62G>A (p.Arg21Gln) CRYAA Mar 01, 2013 MedGen:C1858679,OMIM:604219 Cataract, autosomal dominant germline 21 43169161 AGCGCACCCTGGGGCCCTTCTACCCCAGCCGGCTGTTCGACCAGTTTTTCGGCGAGGGCCT 863224981 213880 NM_004006.2(DMD):c.1388G>A (p.Trp463Ter) DMD Jun 30, 2012 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Duchenne muscular dystrophy germline X 32614397 AGAATCAGAAACTGAAAGAGTTGAATGACTGGCTAACAAAAACAGAAGAAAGAACAAGGAA 80356885 69888 NM_007294.3(BRCA1):c.4524G>A (p.Trp1508Ter) BRCA1 Nov 01, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline;unknown 17 43074482 TTCTAAATGCCCATCATTAGATGATAGGTGGTACATGCACAGTTGCTCTGGGAGTCTTCAG 886044535 274932 NM_001848.2(COL6A1):c.957+1G>A COL6A1 Sep 03, 2016 MedGen:CN033863,OMIM:254090 Ullrich congenital muscular dystrophy 1 germline 21 45990285 CAGGGCTCCAGGGGACCCAAGGGCTACAAGGTGAGCGTGGGCTGCTGGGAGGGGGGAGTTC 118204107 16503 NM_000190.3(HMBS):c.331G>A (p.Gly111Arg) HMBS Oct 08, 1999 MedGen:C0162565,OMIM:176000,Orphanet:ORPHA79276,SNOMED CT:234422006 Acute intermittent porphyria germline 11 119089747 CCCACTGTGCTTCCTCCTGGCTTCACCATCGGAGCCATCTGCAAGTAAGAGTCTTGCAAGT 151340627 26842 NM_001127899.3(CLCN5):c.1238G>A (p.Trp413Ter) CLCN5 Mar 01, 1997 MedGen:C1839874,OMIM:308990 Proteinuria, low molecular weight, with hypercalciuria and nephrocalcinosis germline X 50086551 GAGCACTGTTTATCCGCACAAACATTGCCTGGTGTCGGAAGCGAAAGACCACCCAGTTGGG 121912768 32743 NM_001202.5(BMP4):c.860G>A (p.Arg287His) BMP4 Mar 01, 2009 MedGen:C2677434,OMIM:600625 Orofacial cleft 11 germline 14 53950399 ATGATGGCCGGGGCCATGCCTTGACCCGACGCCGGAGGGCCAAGCGTAGCCCTAAGCATCA 121918694 27593 NM_000461.4(THRB):c.700G>A (p.Ala234Thr) THRB Jun 16, 2017 MedGen:CN118820;MedGen:C2937288,OMIM:188570 Thyroid Hormone Resistance;Thyroid hormone resistance, generalized, autosomal dominant germline 3 24143539 ACTGTCACCGAAGCCCATGTGGCGACCAACGCCCAAGGCAGCCACTGGAAGCAAAAACGGA 56141211 24167 NM_001491.2(GCNT2):c.1043G>A (p.Gly348Glu) GCNT2 Dec 15, 2001 MedGen:C3805373,OMIM:116700 Cataract 13 with adult i phenotype germline 6 10626447 GCCACTATGTACATGGTATTTGTATCTATGGAAACGGAGACTTAAAGTGGCTGGTTAATTC 111033784 36623 NM_000155.3(GALT):c.922G>A (p.Glu308Lys) GALT Dec 04, 2012 MedGen:C0268151,OMIM:230400,Orphanet:ORPHA79239,SNOMED CT:124354006 Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase not provided 9 34649427 TTCTTTCTGTCAGGGGCTCCCACAGGATCAGAGGCTGGGGCCAACTGGAACCATTGGCAGC 72558464 103250 NM_000531.5(OTC):c.908G>A (p.Cys303Tyr) OTC - MedGen:CN517202 not provided unknown X 38411902 TTGCTGCCTCTGACTGGACATTTTTACACTGCTTGCCCAGAAAGCCAGAAGAAGTGGATGA 879254957 246237 NM_000527.4(LDLR):c.1607G>A (p.Trp536Ter) LDLR Mar 25, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11116114 CTCCCACCAGCTTCATGTACTGGACTGACTGGGGAACTCCCGCCAAGATCAAGAAAGGGGG 587778720 139098 NM_000546.5(TP53):c.638G>A (p.Arg213Gln) TP53 Aug 23, 2017 Human Phenotype Ontology:HP:0030078,MeSH:C538231,MedGen:C0152013;MedGen:C0007112;MedGen:C0278701;MeSH:D003528,MedGen:C0010606;Human Phenotype Ontology:HP:0006744,MeSH:D018268,MedGen:C0206686,Orphanet:ORPHA1501;Human Phenotype Ontology:HP:0011459,MedGen:C0152018,Orphanet:ORPHA70482;MeSH:D015179,MedGen:CN236642;Human Phenotype Ontology:HP:0100843,MeSH:D005909,MedGen:C0017636,SNOMED CT:63634009;MedGen:C2239176,OMIM:114550,Orphanet:ORPHA88673,SNOMED CT:187769009,SNOMED CT:25370001;MedGen:C0027672,SNOMED CT:699346009;MedGen:C0085390,Orphanet:ORPHA524,SNOMED CT:428850001;Gene:553989,MedGen:C1835398,OMIM:151623;MeSH:C562393,MedGen:C0151779,SNOMED CT:93655004;MedGen:C0153574,Orphanet:ORPHA213569;MeSH:D009303,MedGen:C0027439;Human Phenotype Ontology:HP:0030692,MeSH:D001932,MedGen:C0006118,SNOMED CT:126952004;Human Phenotype Ontology:HP:0100013,MeSH:D001943,MedGen:C1458155,Orphanet:ORPHA180250,SNOMED CT:126926005;MedGen:C0279663;Human Phenotype Ontology:HP:0006725,MedGen:C0281361;Human Phenotype Ontology:HP:0005584,MeSH:D002292,MedGen:C0007134,OMIM:605074,Orphanet:ORPHA217071,SNOMED CT:41607009;Human Phenotype Ontology:HP:0030359,MedGen:C0149782;MeSH:C535575,MedGen:C1168401,OMIM:275355,Orphanet:ORPHA67037;Human Phenotype Ontology:HP:0006739,MedGen:C0553723;Human Phenotype Ontology:HP:0006740,MedGen:C0279680;MedGen:C0280630;MedGen:CN517202;MedGen:CN169374 Adenocarcinoma of lung;Adenocarcinoma of prostate;Adenocarcinoma of stomach;Adenoid cystic carcinoma;Adrenocortical carcinoma;Carcinoma of esophagus;Colorectal Neoplasms;Glioblastoma;Hepatocellular carcinoma;Hereditary cancer-predisposing syndrome;Li-Fraumeni syndrome;Li-Fraumeni syndrome 1;Malignant melanoma of skin;Malignant neoplasm of body of uterus;Nasopharyngeal Neoplasms;Neoplasm of brain;Neoplasm of the breast;Ovarian Serous Cystadenocarcinoma;Pancreatic adenocarcinoma;Renal cell carcinoma, papillary, 1;Squamous cell carcinoma of lung;Squamous cell carcinoma of the head and neck;Squamous cell carcinoma of the skin;Transitional cell carcinoma of the bladder;Uterine Carcinosarcoma;not provided;not specified germline;somatic 17 7674893 TGGAGTATTTGGATGACAGAAACACTTTTCGACATAGTGTGGTGGTGCCCTATGAGCCGCC 121434355 17024 NM_207361.5(FREM2):c.5920G>A (p.Glu1974Lys) FREM2 Sep 01, 2008 MedGen:CN464191,OMIM:617666 FRASER SYNDROME 2 germline 13 38784709 GTCATAATTGATGACTCTTTGTACGAGGAGGAGGAAACCTTCCATGTCCTTCTGAGCATGC 267607042 16071 NM_015559.2(SETBP1):c.2602G>A (p.Asp868Asn) SETBP1 Feb 08, 2013 MedGen:C1849294,OMIM:269150,SNOMED CT:18899000 Schinzel-Giedion syndrome germline 18 44951942 GAGTCCCACAGTGAGGAGACGATCCCCAGCGACAGCGGCATTGGGACAGACAACAACAGCA 587780588 139371 NM_001845.5(COL4A1):c.2086G>A (p.Gly696Ser) COL4A1 Feb 11, 2016 MedGen:C1843512,OMIM:607595;MedGen:CN517202 Brain small vessel disease with hemorrhage;not provided de novo;germline 13 110183002 CAGCCAGGCATTGGATTTCCAGGGCCCCCCGGCCCCAAAGGTAACCCTGCCAGACGGACCC 727504349 175160 NM_000256.3(MYBPC3):c.2747G>A (p.Trp916Ter) MYBPC3 Jun 07, 2017 Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Hypertrophic cardiomyopathy;Primary familial hypertrophic cardiomyopathy;not provided germline 11 47335200 CCTCCCCCTCCCCACCCCCAGGCTCAGAGTGGGTGGCTGCCCTGCAGGGGCTGACAGAGCA 786204181 186092 NM_002485.4(NBN):c.2165G>A (p.Trp722Ter) NBN Nov 25, 2014 MedGen:C0398791,OMIM:251260,Orphanet:ORPHA647,SNOMED CT:234638009 Microcephaly, normal intelligence and immunodeficiency germline 8 89943272 ATGCTCGAAAGAATACAGAACTAGAAGAGTGGCTAAGGCAGGAAATGGAGGTTAGTAGGAA 137852671 24136 NM_001287174.1(ABCC8):c.4519G>A (p.Glu1507Lys) ABCC8 Oct 07, 2015 MedGen:C1257959,OMIM:256450,SNOMED CT:360339005;MedGen:CN517202 Persistent hyperinsulinemic hypoglycemia of infancy;not provided germline 11 17394295 GTGAGGAAGACCAGCATCTTCATCATGGACGAGGCCACGGCTTCCATTGACATGGCCACGG 753920931 465091 NM_025137.3(SPG11):c.4790G>A (p.Trp1597Ter) SPG11 Jul 05, 2017 MedGen:C1858479,OMIM:604360,Orphanet:ORPHA2822 Spastic paraplegia 11, autosomal recessive germline 15 44589368 CAAAGGTCCACCCTGTCATCCCTGCCATGTGGCTGGAGGATCAGGTGTGTTTCCTTTTGAA 111033309 52701 NM_000441.1(SLC26A4):c.2015G>A (p.Gly672Glu) SLC26A4 Feb 19, 2015 Human Phenotype Ontology:HP:0011387,MedGen:C1863752,OMIM:600791;MedGen:C0271829,OMIM:274600,Orphanet:ORPHA705,SNOMED CT:70348004 Enlarged vestibular aqueduct;Pendred's syndrome germline 7 107702038 GTGGAGCTATATCTTTCCTGGACGTTGTTGGAGTGAGATCACTGCGGGTGGTAAGGTTCTG -1 433384 NM_000061.2(BTK):c.1780G>A (p.Gly594Arg) BTK Dec 15, 2016 MedGen:CN169374 not specified germline X 101353322 GGGGTTTTGATGTGGGAAATTTACTCCCTGGGGAAGATGCCATATGAGAGATTTACTAACA 122456133 26653 NM_005183.3(CACNA1F):c.1106G>A (p.Gly369Asp) CACNA1F Jul 01, 1998 MedGen:C1848172,OMIM:300071 Congenital stationary night blindness, type 2A germline X 49228048 GGTCCTTCTTCGTCCTCAACCTTGTGCTTGGCGTCCTGAGTGGGTGAGAGACCTAGACACT -1 446612 NM_000444.5(PHEX):c.663+1G>A PHEX Jun 20, 2016 MedGen:CN517202 not provided germline X 22077703 GACAAAGCATCCAATGAACATATCTTGAAGGTATAATGAGGACCCATTCATCTTCTTTGCT 587777379 136540 NM_001845.5(COL4A1):c.3976G>A (p.Gly1326Arg) COL4A1 Jan 01, 2013 Human Phenotype Ontology:HP:0010636,MedGen:C0266484,OMIM:269160,Orphanet:ORPHA799,SNOMED CT:253159001 SCHIZENCEPHALY germline 13 110166277 TTAGGTCCAAAAGGTCTTCCTGGCCTCCAGGGAATTAAAGGTGATCAAGGCGATCAAGGCG 1060503762 390935 NM_003000.2(SDHB):c.141G>A (p.Trp47Ter) SDHB Oct 09, 2016 Human Phenotype Ontology:HP:0100723,MeSH:D046152,MedGen:C0238198,OMIM:606764,Orphanet:ORPHA44890;MedGen:C1861848,OMIM:115310;Human Phenotype Ontology:HP:0002666,MedGen:C0031511,OMIM:171300 Gastrointestinal stroma tumor;Paragangliomas 4;Pheochromocytoma germline 1 17044820 CCGTATCAAGAAATTTGCCATCTATCGATGGGACCCAGACAAGGCTGGAGACAAACCTCAT 104886329 35754 NM_000495.4(COL4A5):c.1424-1G>A COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108595508 TAAAATTTGTTTGTTATTATGATTTCACTAGGTGACAAAGGTGACACTTGCTTCAACTGCA -1 380444 NM_000228.2(LAMB3):c.3383-1G>A LAMB3 Mar 01, 2017 MedGen:C0399367,OMIM:104530,Orphanet:ORPHA100031,SNOMED CT:109476006 Amelogenesis imperfecta, type IA germline 1 209615408 CCTCCTCCTGCTGCTGTTCCATTTGCCTCAGACATGGAGTTGGAGCTGCTGCGGGGCAGCC 104894273 15515 NM_000317.2(PTS):c.74G>A (p.Arg25Gln) PTS May 01, 1994 MedGen:C0878676,OMIM:261640,Orphanet:ORPHA13 6-pyruvoyl-tetrahydropterin synthase deficiency germline 11 112226517 CCCGCCGCATCTCCTTCAGCGCGAGCCACCGATTGTACAGGTAGGGTGTGCACACAGGTAC 1085307267 414206 NM_001204.6(BMPR2):c.853-1G>A BMPR2 - MedGen:C0152171,OMIM:178600,SNOMED CT:26174007 Primary pulmonary hypertension germline 2 202520086 TTTTTTTTTTCGCATTTTTTCCTCTATATAGGGATCTTTATGCAAGTATTTAAGTCTCCAC 80338723 21044 NM_014251.2(SLC25A13):c.1311+1G>A SLC25A13 Jan 05, 2012 MedGen:C1863844,OMIM:603471,Orphanet:ORPHA247585 Citrullinemia type II germline 7 96170044 CTTGCAGCAGAAATTCTTGCTGGAGGCTGCGTAAGTACCTTTTGAAGCTCTCTTCATTGAA 796052923 201117 NM_000310.3(PPT1):c.234+1G>A PPT1 Aug 06, 2013 MedGen:CN517202 not provided germline 1 40092397 TCTTTAGAGATTGGGAAGACCCTGATGGAGGTAAGGCGCTTCACAGCTGTTCCTTTGAAGG 267606800 464356 NM_000138.4(FBN1):c.4691G>A (p.Cys1564Tyr) FBN1 May 30, 2017 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:CN118826,Orphanet:ORPHA91387 Marfan syndrome;Thoracic aortic aneurysm and aortic dissection germline 15 48467994 GAGTTGGTGTTTCCAAAGCTTCCTGCTGCTGTTCTCTGGGTAAAGCCTGGGGTACTCCTTG -1 445344 NM_000138.4(FBN1):c.6953G>A (p.Cys2318Tyr) FBN1 Sep 21, 2017 MedGen:CN517202 not provided germline 15 48428390 TCAACACCCGTGGGAGCTACACCTGTGAGTGTAATGATGGGTTTACCGCCAGCCCCAACCA 397514767 75619 NM_203330.2(CD59):c.266G>A (p.Cys89Tyr) CD59 Jan 03, 2013 MedGen:C2676767,OMIM:612300,Orphanet:ORPHA169464 Cd59 deficiency germline 11 33710247 TGAGGGAAAATGAGCTAACGTACTACTGCTGCAAGAAGGACCTGTGTAACTTTAACGAACA 121909734 31164 NM_005271.4(GLUD1):c.1496G>A (p.Gly499Asp) GLUD1 Apr 16, 2015 MedGen:C1847555,OMIM:606762,Orphanet:ORPHA35878 Hyperinsulinism-hyperammonemia syndrome germline 10 87053403 TGTTAAACTTGTGTTCTTTTCCCTAATAGGGTGCATCTGAGAAAGACATCGTGCACTCTGG 879255261 206661 NM_032436.3(CHAMP1):c.1002G>A (p.Trp334Ter) CHAMP1 Mar 12, 2015 MedGen:C4225275,OMIM:616579 Mental retardation, autosomal dominant 40 germline 13 114324844 ATCCAATCCTTCAGCATCATCAGGACCTTGGAAGCCAGCTAAACCTGCTCCATCTGTGTCT 28933687 25585 NM_006915.2(RP2):c.353G>A (p.Arg118His) RP2 Aug 01, 2000 MedGen:C2681923,OMIM:312600 Retinitis pigmentosa 2 germline X 46853726 GCAAGTGCACATTAGCCTGCCAACAATTTCGTGTGCGAGATTGTAGAAAGCTGGAAGTCTT 876657393 188222 NM_001288953.1(TTC7A):c.2392G>A (p.Ala798Thr) TTC7A Apr 01, 2014 MedGen:C0220744,OMIM:243150,Orphanet:ORPHA436252,SNOMED CT:95472001 Multiple gastrointestinal atresias germline 2 47073840 GTGCTGCAGGCCCAGGGCCAGAACGAGGCTGCCGTTGACTGCTTCCTCACCGCCCTTGAGC 367543051 51275 NM_001100.3(ACTA1):c.727G>A (p.Glu243Lys) ACTA1 Apr 11, 2013 MedGen:C0546264,OMIM:255310,Orphanet:ORPHA2020,SNOMED CT:240084007 Congenital myopathy with fiber type disproportion not provided 1 229432075 GCCTCCTCCTCCTCCCTGGAAAAGAGCTACGAGCTGCCAGACGGGCAGGTCATCACCATCG 72653169 32334 NM_000088.3(COL1A1):c.3028G>A (p.Gly1010Ser) COL1A1 Jan 15, 1993 MedGen:C0268363,OMIM:166220,Orphanet:ORPHA216820,SNOMED CT:205497004 Osteogenesis imperfecta with normal sclerae, dominant form germline 17 50188920 ATGGGCCCCCCTGGATTGGCTGGACCCCCTGGTGAATCTGGACGTGAGGTGAGCAGTCCCC 2904552 19050 NM_016335.4(PRODH):c.1292G>A (p.Arg431His) PRODH Mar 01, 2005 MedGen:C0268529,OMIM:239500,Orphanet:ORPHA419,SNOMED CT:61071003;MedGen:C1833247,OMIM:600850 Proline dehydrogenase deficiency;Schizophrenia 4 germline 22 18918451 ACAATGTGACCCTGGACGTGGAGCTGGCTCGCCGTGAGGGCTGGTGTTTTGGGGCCAAGCT 61749385 106177 NM_000552.4(VWF):c.3917G>A (p.Arg1306Gln) VWF Dec 02, 2016 MedGen:CN517202 not provided germline 12 6019501 TGAAGGCCTTTGTGGTGGACATGATGGAGCGGCTGCGCATCTCCCAGAAGTGGGTCCGCGT 876660678 235211 NM_024675.3(PALB2):c.2630G>A (p.Trp877Ter) PALB2 Sep 12, 2015 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 16 23626354 CCTGTTCCGTAGATGTGAGTGCCATGTTTTGGGAAAGAGCCGGTTGTAAAGAGCCATGTAT 121918718 27524 NM_000359.2(TGM1):c.425G>A (p.Arg142His) TGM1 Sep 01, 1997 MedGen:C3536797,OMIM:242300 Autosomal recessive congenital ichthyosis 1 germline 14 24261778 ACGAGTATGAGTACGACGAGCTGATAGTGCGCCGCGGGCAGCCTTTCCATATGCTCCTCCT 137852655 24233 NM_000095.2(COMP):c.2156G>A (p.Gly719Asp) COMP Feb 28, 2013 na;MedGen:C0410538,OMIM:177170,Orphanet:ORPHA750,SNOMED CT:22567005 Pseudoachondroplasia, severe;Pseudoachondroplastic spondyloepiphyseal dysplasia syndrome germline 19 18783125 GCAACGTGGTCTTGGACACAACCATGCGGGGTGGCCGCCTGGGGGTCTTCTGCTTCTCCCA 66523073 32335 NM_000088.3(COL1A1):c.3064G>A (p.Gly1022Ser) COL1A1 Nov 25, 1989 MedGen:C0268362,OMIM:259420,Orphanet:ORPHA216812,SNOMED CT:385483009 Osteogenesis imperfecta type III germline 17 50188777 CTCTCTCTGCAGGGGGCTCCTGGTGCCGAAGGTTCCCCTGGACGAGACGGTTCTCCTGGCG 113605263 27487 NM_152263.3(TPM3):c.855-1G>A TPM3 Aug 27, 2002 MedGen:C1836448,OMIM:609284;MedGen:CN517202 Nemaline myopathy 1;not provided germline 1 154167941 TCACCTAGAGTATCCTTACTTTTTCATACAGATAATTATCACCGTTTCTGCTCTGTTCTGG 121913020 31823 NM_000400.3(ERCC2):c.335G>A (p.Arg112His) ERCC2 Apr 25, 2017 MedGen:C1866504,OMIM:601675;MedGen:C0268138,OMIM:278730,SNOMED CT:68637004;MedGen:CN517202 Trichothiodystrophy 1, photosensitive;Xeroderma pigmentosum, group D;not provided germline 19 45368655 TGCCGTTTCTGGGACTGGCTCTGAGCTCCCGCAAAAACTTGTGTATTCACCCTGAGGTGAG 149659001 441559 NM_000486.5(AQP2):c.211G>A (p.Val71Met) AQP2 Jan 25, 2017 MedGen:CN517202 not provided germline 12 49951041 CACATAAGCGGGGCCCACATCAACCCTGCCGTGACTGTGGCCTGCCTGGTGGGCTGCCACG 794727236 192186 NM_000162.4(GCK):c.118G>A (p.Glu40Lys) GCK Nov 22, 2014 MedGen:C1841962,OMIM:125851 Maturity-onset diabetes of the young, type 2 germline 7 44153391 CTGAAGAAGGTGATGAGACGGATGCAGAAGGAGATGGACCGCGGCCTGAGGCTGGAGACCC 119485092 20074 NM_022041.3(GAN):c.413G>A (p.Arg138His) GAN Dec 01, 2000 MedGen:C1850386,OMIM:256850,Orphanet:ORPHA643,SNOMED CT:128207002 Giant axonal neuropathy germline 16 81354535 GCATTGCTGCTGAGAACTGTATTGGTATCCGTGACTTTGCACTACATTACTGCCTCCATCA 28940291 17307 NM_014874.3(MFN2):c.281G>A (p.Arg94Gln) MFN2 Jul 13, 2017 MedGen:CN043576;MedGen:C1836485,OMIM:609260,Orphanet:ORPHA99947;MedGen:CN517202 Charcot-Marie-Tooth disease, type 2;Charcot-Marie-Tooth disease, type 2A2A;not provided germline 1 11992660 AAGTGAGAGGCATCAGTGAGGTGCTGGCTCGGAGGCACATGAAAGTGGCTTTTTTTGGCCG 804290 426532 NM_002052.4(GATA4):c.*852G>A GATA4 Jan 07, 2017 MedGen:C0152021,SNOMED CT:13213009 Congenital heart disease unknown 8 11759327 ACATAGAGGGGTTCTGAGTAAGAACAAAACGTTCTGCTGCTCAAGCCAGTCTGGCAAGCAC 61672878 29534 NM_170707.3(LMNA):c.1130G>A (p.Arg377His) LMNA Jul 05, 2017 MedGen:CN043576;MedGen:C1449563,OMIM:115200,Orphanet:ORPHA300751;MedGen:C1834653,OMIM:159001,Orphanet:ORPHA264;MeSH:D009136,MedGen:C0026850,Orphanet:ORPHA98473;MedGen:CN517202 Charcot-Marie-Tooth disease, type 2;Dilated cardiomyopathy 1A;Limb-girdle muscular dystrophy, type 1B;Muscular dystrophy;not provided germline 1 156136094 TGGCCCTGGACATGGAGATCCACGCCTACCGCAAGCTCTTGGAGGGCGAGGAGGAGAGGTG 745603321 440095 NM_025132.3(WDR19):c.3800G>A (p.Cys1267Tyr) WDR19 Jun 01, 2017 MedGen:C0265275,Orphanet:ORPHA474,SNOMED CT:75049004 Jeune thoracic dystrophy maternal 4 39277103 AATTTCTTCTCCCAGAGTGTGAACTCCTCTGTCCTGGATGTAAAAACAGTATCCCATATTG 886041134 265155 NM_000047.2(ARSE):c.1300G>A (p.Gly434Ser) ARSE Apr 13, 2016 MedGen:CN517202 not provided germline X 2936853 TGCCATGTTCCTTCCTGCAGAGTGATTGACGGCCAAGACCTTCTGCCCTTGCTCCTGGGGA 1057519537 362335 NM_003165.3(STXBP1):c.1565G>A (p.Trp522Ter) STXBP1 Nov 16, 2016 Human Phenotype Ontology:HP:0200134,MedGen:C0543888 Epileptic encephalopathy de novo 9 127682423 CTCTCTTTCTCAGCGCCCGCTATGGGCACTGGCATAAGAACAAGGCCCCAGGCGAGTACCG 121918725 27531 NM_000359.2(TGM1):c.832G>A (p.Gly278Arg) TGM1 Jan 09, 2017 MedGen:C3536797,OMIM:242300;MedGen:CN517202 Autosomal recessive congenital ichthyosis 1;not provided germline 14 24259984 GTTCTTAATGAGTCTGGGAGAATTTACTACGGGACCGAAGCACAGATTGGTGAGCGGACCT 397508176 67882 NM_000492.3(CFTR):c.1209+1G>A CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline 7 117542109 ATGGAGAATGTAACAGCCTTCTGGGAGGAGGTCAGAATTTTTAAAAAATTGTTTGCTCTAA 121908569 20914 NM_004836.6(EIF2AK3):c.1763G>A (p.Arg588Gln) EIF2AK3 Aug 01, 2000 MedGen:C0432217,OMIM:226980,Orphanet:ORPHA1667,SNOMED CT:254066006 Wolcott-Rallison dysplasia germline 2 88583430 ATGACATAAAAAACTCTGGATATATATCACGGTAAGAGTCTTATAAAATACAACCATCTGA 587778785 76752 NM_000784.3(CYP27A1):c.1264-1G>A CYP27A1 Aug 01, 2013 MedGen:C0238052,OMIM:213700,Orphanet:ORPHA909,SNOMED CT:63246000 Cholestanol storage disease not provided 2 218814544 GGCATTCATGCTGCCCAATCTTCCTTTATAGACCCAGTTTGTGTTCTGCCACTATGTGGTG 869025323 223716 NM_001042616.2(PIGY):c.-540G>A PIGY Jan 10, 2018 MedGen:C4225201,OMIM:616809 Hyperphosphatasia with mental retardation syndrome 6 germline 4 88523797 TCCTCGGCAGCGTTTCCTGGAGGACCAGGGGGCGGGGCCTGCCCGGCTGGCCTGGACGAAC 587779610 107074 NM_000090.3(COL3A1):c.3284G>A (p.Gly1095Asp) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189007528 AGGGTCCTCAAGGCCCACGTGGTGACAAAGGTGAAACAGGTGAACGTGGAGCTGCTGGCAT 199476112 24747 NC_012920.1:m.11778G>A MT-ND4 Oct 03, 2017 Human Phenotype Ontology:HP:0001112,MedGen:C0917796,OMIM:535000,Orphanet:ORPHA104,SNOMED CT:58610003;MedGen:CN517202;MedGen:CN169374 Leber's optic atrophy;not provided;not specified germline MT 11778 CAAACTCAAACTACGAACGCACTCACAGTCGCATCATAATCCTCTCTCAAGGACTTCAAAC -1 432451 NM_001270.2(CHD1):c.5123G>A (p.Arg1708Gln) CHD1 Sep 21, 2017 MedGen:CN482172,OMIM:617682 PILAROWSKI-BJORNSSON SYNDROME germline 5 98856390 AAAGTACACCGGAGCATACCTGGAGTAGTCGGAAAACATAACAAAAACTGATACTTCGTCT 118204087 16551 NM_000298.5(PKLR):c.110G>A (p.Gly37Glu) PKLR Jan 01, 1997 MedGen:C1863224,OMIM:102900 Adenosine triphosphate, elevated, of erythrocytes germline 1 155300271 CTGAGCCCCCTTCTACCACAGGGCCAGCGGGGTATCTGCGGCGGGCCAGTGTGGCCCAACT 118204068 16578 NM_000237.2(LPL):c.829G>A (p.Asp277Asn) LPL Jul 01, 1992 MedGen:C0023817,OMIM:238600,Orphanet:ORPHA309015,SNOMED CT:238086005,SNOMED CT:275598004 Hyperlipoproteinemia, type I germline 8 19955894 TCCCACGAGCGCTCCATTCATCTCTTCATCGACTCTCTGTTGAATGAAGAAAATCCAAGTA 75267011 17887 NM_020184.3(CNNM4):c.707G>A (p.Arg236Gln) CNNM4 Feb 01, 2009 MedGen:C1857588,OMIM:217080,Orphanet:ORPHA1021 Cone-rod dystrophy amelogenesis imperfecta germline 2 96761706 GGCGCTATGCCCGCAAGATTGAGCCCATCCGGCGCAAGGGCAACTACCTTCTCTGCTCGTT 113994037 19158 NM_001034116.1(EIF2B4):c.1191+1G>A EIF2B4 Feb 01, 2002 MedGen:C1858991,OMIM:603896,Orphanet:ORPHA99854 Leukoencephalopathy with vanishing white matter germline 2 27366758 ATTCCTGCAGCCTCCTATGTGCTCCCAGAGGTAAGTACAGAGGAAAAGGACTCCAAAGTTG 74315205 19565 NM_006005.3(WFS1):c.2590G>A (p.Glu864Lys) WFS1 Jul 21, 2017 MedGen:CN184629;MedGen:C1833021,OMIM:600965;MedGen:C1857286,OMIM:614296,Orphanet:ORPHA411590;MedGen:CN517202 DFNA6/14/38 Nonsyndromic Low-Frequency Sensorineural Hearing Loss;WFS1-Related Disorders;Wolfram-like syndrome, autosomal dominant;not provided germline 4 6302385 CTCTCACCCACCAGGCGGCACGTGAAGATCGAGCACGACTGGCGCAGCACCGTGCATGGCG 483352908 39789 NM_152419.2(HGSNAT):c.234+1G>A HGSNAT Mar 31, 2014 MedGen:C0086649,OMIM:252930,Orphanet:ORPHA79271,SNOMED CT:75238000;MedGen:CN517202 Mucopolysaccharidosis, MPS-III-C;not provided germline 8 43147064 GTCTACTGGAAATCTGAATGCTGTTATCACGTATGTATCAGTTCACACTCAGTTCTGTTTG 28897756 46771 NM_000059.3(BRCA2):c.9117G>A (p.Pro3039=) BRCA2 Jul 24, 2017 MedGen:C2675520,OMIM:612555;MedGen:C2675520,OMIM:612555;MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C1838457,OMIM:605724,Orphanet:ORPHA319462;MedGen:C2751641,OMIM:613029;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;Human Phenotype Ontology:HP:0012125,MedGen:C0376358,OMIM:176807,SNOMED CT:399068003;Human Phenotype Ontology:HP:0002885,MeSH:D008527,MedGen:C0025149,OMIM:155255,Orphanet:ORPHA616;MedGen:C3150546,OMIM:613347;MedGen:C1861028,OMIM:189960;MedGen:CN033288,OMIM:194070;MedGen:CN517202 Breast-ovarian cancer, familial 2;Breast-ovarian cancer, familial 2;Familial cancer of breast;Fanconi anemia, complementation group D1;Glioma susceptibility 3;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;Malignant tumor of prostate;Medulloblastoma;Pancreatic cancer 2;Tracheoesophageal fistula;Wilms tumor 1;not provided germline;unknown 13 32379913 GACAAAAAAAACTCAGTATCAACAACTACCGGTACAAACCTTTCATTGTAATTTTTCAGTT 72664282 427062 NM_001171.5(ABCC6):c.645G>A (p.Thr215=) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16212202 GACTGGGGCAGCCTTCCCCTCCAAAGCCACGTTCTGGTGGGTTTCTGGGTAAGTAAAGTCG 1131692280 424508 NM_000297.3(PKD2):c.1319+1G>A PKD2 Jun 30, 2017 MedGen:C2751306,OMIM:613095;MedGen:CN119611 Polycystic kidney disease 2;Polycystic kidney disease, autosomal dominant germline;unknown 4 88043458 CGCCAACATTAACCTGTTCTGTGTGGTCAGGTGTGTACTGAGGACATGCATCCCTCCTATT 879255676 247656 NM_144997.5(FLCN):c.1300+1G>A FLCN Feb 06, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0346010,OMIM:135150,Orphanet:ORPHA122,SNOMED CT:110985001 Hereditary cancer-predisposing syndrome;Multiple fibrofolliculomas germline 17 17216379 TGCAGATCCCCCCCCACGTGCTCTCCTCAGGTGCGTGCCCCCGCGGGCTGTGGGGCCATGC 199476085 23270 NM_004329.2(BMPR1A):c.812G>A (p.Trp271Ter) BMPR1A Jun 01, 2001 MedGen:C0345893,OMIM:174900,Orphanet:ORPHA329971,SNOMED CT:9273005 Juvenile polyposis syndrome germline 10 86917270 AAGTATTCTTTACCACTGAAGAAGCCAGCTGGTTTCGAGAAACAGAAATCTACCAAACTGT 794726974 190729 NM_000214.2(JAG1):c.1326G>A (p.Trp442Ter) JAG1 May 11, 2015 MedGen:C1956125,OMIM:118450 Alagille syndrome 1 germline 20 10649544 CAGCTACTACTGCGACTGTCTTCCCGGCTGGATGGGTCAGAATTGTGACATAAGTGAGTGA 587779671 107172 NM_000090.3(COL3A1):c.582+5G>A (p.Gly177_Pro194del) COL3A1 Aug 03, 2000 MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188988139 GTACATCTGGTCATCCTGGTTCCCCTGTAAGTATAGCCATTGGTGGTGTTTTCTTCCTCAT 121908022 18787 NM_024740.2(ALG9):c.1588G>A (p.Glu530Lys) ALG9 Jul 01, 2004 MedGen:C2931006,OMIM:608776,Orphanet:ORPHA79328,SNOMED CT:720978005 ALG9 congenital disorder of glycosylation germline 11 111836179 CCTACTGACATGAATGACCAGAATCTAGAAGAGCCATCCAGATATGTAAGGGCTACATTCT 1064792875 224781 NM_001257989.1(TYMP):c.1326G>A (p.Trp442Ter) TYMP Jan 14, 2016 MedGen:C0872218,OMIM:603041,Orphanet:ORPHA298 Mitochondrial DNA depletion syndrome 1 (MNGIE type) germline 22 50525908 AACAGCCCCTCGCTCTGCAGGGACCCCCTGGCTCCGCGTGCACCGGGACGGCCCCGCGCTC -1 481351 NM_001127899.3(CLCN5):c.575G>A (p.Trp192Ter) CLCN5 Oct 12, 2017 MedGen:C1848336,OMIM:300009 Dent disease 1 germline X 50075954 AGAGAGACAAATGTCCAGAGTGGAATAGTTGGTCCCAGCTTATCATCAGCACAGATGAGGT 886037851 247548 NM_003705.4(SLC25A12):c.1058G>A (p.Arg353Gln) SLC25A12 Aug 01, 2016 MedGen:C2751855,OMIM:612949,Orphanet:ORPHA353217 Hypomyelination, global cerebral germline 2 171813452 CAGTGTATCCTATAGATCTGGTGAAGACCCGAATGCAAAACCAGCGTGGCTCTGGCTCTGT 62514893 15661 NM_000277.2(PAH):c.3G>A (p.Met1Ile) PAH Jan 01, 1992 MedGen:C0031485,OMIM:261600,Orphanet:ORPHA716,SNOMED CT:154735006;MedGen:CN517202 Phenylketonuria;not provided germline 12 102917128 CCAGAGACCTCACTCCCGGGGAGCCAGCATGTCCACTGCGGTCCTGGAAAACCCAGGCTTG 1064792861 224749 NM_001257989.1(TYMP):c.340G>A (p.Asp114Asn) TYMP Jan 14, 2016 MedGen:C0872218,OMIM:603041,Orphanet:ORPHA298 Mitochondrial DNA depletion syndrome 1 (MNGIE type) germline 22 50529213 TGGCCAGAGGCCTGGCGCCAGCAGCTTGTGGACAAGCATTCCACAGGGGGTGTGGGTGACA 121434371 17122 NM_000159.3(GCDH):c.877G>A (p.Ala293Thr) GCDH May 26, 2017 MedGen:C0268595,OMIM:231670,Orphanet:ORPHA25,SNOMED CT:360416003,SNOMED CT:76175005 Glutaric aciduria, type 1 germline 19 12896934 CTACAGGGTCCCTTCGGCTGCCTGAACAACGCCCGGTACGGCATCGCGTGGGGCGTGCTTG 146075796 259844 NM_005943.5(MOCS1):c.1102+1G>A MOCS1 Jun 22, 2017 MedGen:CN517202 not provided germline 6 39909834 CTGTGGGCAGGAAGAAGCGGCAGCATGCAGGTAAGTGCAGGGTGGGGAGGGCTGGCCTGGA 869312137 214050 NM_000169.2(GLA):c.104G>A (p.Gly35Glu) GLA Jan 01, 2014 MedGen:CN233149;Human Phenotype Ontology:HP:0001071,MedGen:C0002986,OMIM:301500,Orphanet:ORPHA324,SNOMED CT:16652001 Deoxygalactonojirimycin response;Fabry disease inherited X 101407800 ACATCCCTGGGGCTAGAGCACTGGACAATGGATTGGCAAGGACGCCTACCATGGGCTGGCT 587776951 49864 NM_001159772.1(CANT1):c.-286+1G>A CANT1 Mar 29, 2013 MedGen:C4012146,OMIM:251450 Desbuquois dysplasia 1 germline 17 79009663 TCGCGGGCACCGGAGCCAGCCCCGCAGCGGGTGAGTGACTGCGCCCGCGGCCGCCGGCGCC 80356913 69138 NM_007294.3(BRCA1):c.212G>A (p.Arg71Lys) BRCA1 Oct 02, 2015 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome germline 17 43106456 GTCCTTTATGTAAGAATGATATAACCAAAAGGTATATAATTTGGTAATGATGCTAGGTTGG 35378915 30069 NM_000559.2(HBG1):c.-170G>A HBG1 Aug 06, 1992 MedGen:C1841621,OMIM:141749;MedGen:C4017537;MedGen:C3891817 Fetal hemoglobin quantitative trait locus 1;Greek HPFH;Sardinian HPFH germline 11 5249974 CTCCACCCATGGGTTGGCCAGCCTTGCCTTGACCAATAGCCTTGACAAGGCAAACTTGACC 797044510 178183 NM_000260.3(MYO7A):c.470+1G>A MYO7A Aug 19, 2014 MedGen:C1568247,OMIM:276900,Orphanet:ORPHA231169 Usher syndrome, type 1 germline 11 77156092 CAACAGCCGAGACCAGTGCTGCATCATCAGGTGGGCGGCCCAGCACCTGTGTGGAGCTCCA 794728161 197818 NM_000138.4(FBN1):c.539-1G>A FBN1 Jan 13, 2016 MedGen:CN517202 not provided germline 15 48537809 TTTTCATCAGATTTTTATTCTTTATTTTCAGATTACAGGACAGGCCCATGTTTTACTGTGA 201335279 439656 NM_001447.2(FAT2):c.10946G>A (p.Arg3649Gln) FAT2 Nov 16, 2017 MedGen:CN623017,OMIM:617769 SPINOCEREBELLAR ATAXIA 45 germline 5 151521647 CCCCCGAGGAGCTGGTGAGTGACCACTGGCGGAACCTGCAGAGGTTCCTCAGCCATAAGCT 121907954 18937 NM_000520.5(HEXA):c.805G>A (p.Gly269Ser) HEXA May 24, 2017 MedGen:CN068773;MedGen:C0039373,OMIM:272800,Orphanet:ORPHA845,SNOMED CT:111385000;MedGen:CN517202 Gm2-gangliosidosis, adult;Tay-Sachs disease;not provided germline;unknown 15 72350518 ACTCCTGGCCACACTTTGTCCTGGGGACCAGGTAAGAATGATGTCTGGGACCAGAGGGACT -1 450492 NM_000384.2(APOB):c.1830-1G>A APOB Jul 25, 2017 MedGen:CN182502,OMIM:615558 Hypobetalipoproteinemia, familial, 1 germline 2 21028066 GTCAGCTCAAAATATACTTCTTCTTATCTAGTCTGAAAAAGTTAGTGAAAGAAGCTCTGAA 121909392 16350 NM_001174089.1(SLC4A11):c.2558G>A (p.Arg853His) SLC4A11 Jan 01, 2007 MedGen:C0544008 Corneal endothelial dystrophy germline 20 3228259 CCCTCATCATGATCGCCATGATCCCCATCCGGTACAGGCGGGTGGGCAGTGGGCAGGAGGG 587779836 132833 NM_000051.3(ATM):c.3836G>A (p.Trp1279Ter) ATM Oct 09, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline 11 108284316 AGTCCATTGCTAATCAGATTCAAGAGGACTGGAAAAGTCTTCTAACAGACTGCTTTCCAAA 137853053 22099 NM_001172435.1(RAB3GAP1):c.1734G>A (p.Trp578Ter) RAB3GAP1 Mar 01, 2005 MedGen:C1838625,OMIM:600118 Warburg micro syndrome 1 germline 2 135135743 GGGAGAGGTAGGAAAATCTTGGGATTCCTGGAGTGACAGCGAAGAAGAATTTTTTGAATGC 137852563 24844 NM_000044.4(AR):c.2157G>A (p.Trp719Ter) AR Jun 01, 1990 MedGen:C0039585,OMIM:300068,SNOMED CT:12313004 Androgen resistance syndrome germline X 67711673 AGAGAGACAGCTTGTACACGTGGTCAAGTGGGCCAAGGCCTTGCCTGGTAAGGAAAAGGGA 587779420 106850 NM_000090.3(COL3A1):c.548G>A (p.Gly183Asp) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188988100 TCACATTCCAGGGCCCCCCAGGCCCTCCCGGTCCCCCTGGTACATCTGGTCATCCTGGTTC 80356714 26614 NM_004299.5(ABCB7):c.1300G>A (p.Glu434Lys) ABCB7 Apr 07, 2009 MedGen:C1845028,OMIM:301310,Orphanet:ORPHA2802 Anemia sideroblastic and spinocerebellar ataxia germline X 75070433 CCCCTGAACTTTCTGGGAACTGTATATAGAGAGACTAGACAAGCACTCATAGATATGAACA 193922370 45215 NM_000249.3(MLH1):c.454-1G>A MLH1 Sep 05, 2013 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Lynch syndrome germline 3 37008813 AATTTACAAGAAAAATCAATCTTCTGTTCAGGTGGAGGACCTTTTTTACAACATAGCCACG 397515407 48198 NM_020822.2(KCNT1):c.1193G>A (p.Arg398Gln) KCNT1 Jul 31, 2017 MedGen:C3554195,OMIM:614959;MedGen:C3554306,OMIM:615005;MedGen:C3554306,OMIM:615005;MedGen:CN517202 Early infantile epileptic encephalopathy 14;Epilepsy, nocturnal frontal lobe, 5;Epilepsy, nocturnal frontal lobe, 5;not provided germline 9 135765188 ACTTCCTGAACGAGTTCTACGCCCACCCCCGGCTCCAGGTGAGGCCCCTTACCGTGGCCCA -1 480578 NM_023935.2(DDRGK1):c.408+1G>A DDRGK1 Jan 10, 2018 MedGen:C1865185,OMIM:602557,Orphanet:ORPHA93352 Spondyloepimetaphyseal dysplasia Shohat type germline 20 3200341 GAGAAACAAGCGCGAAAGGCCCAGCGTGAGGCAAGCCGGAGGGATGGGGTGCAGCTCTGGG 1064796332 408663 NM_001844.4(COL2A1):c.1330G>A (p.Gly444Ser) COL2A1 Sep 21, 2017 MedGen:CN517202 not provided germline 12 47987113 CCTGGGCCACGGGGCCCTCCTGGCCCTCAAGGTGCAACTGGTCCTCTGGGCCCGAAAGGTC 66656800 26049 NM_000531.5(OTC):c.386G>A (p.Arg129His) OTC Feb 01, 1995 MedGen:C0268542,OMIM:311250,Orphanet:ORPHA664,SNOMED CT:80908008;MedGen:CN517202 Ornithine carbamoyltransferase deficiency;not provided germline;unknown X 38381429 GTGTGAATGAAAGTCTCACGGACACGGCCCGGTTTGTAAATATTTTCTTCTCTCCAAAGCT 28941476 17304 NM_000101.3(CYBA):c.70G>A (p.Gly24Arg) CYBA Mar 01, 2000 MedGen:C1856255,OMIM:233690 Granulomatous disease, chronic, autosomal recessive, cytochrome b-negative germline 16 88648103 GACCCACTTCTCCCCGCAGTCCTCATCACCGGGGGCATCGTGGCCACAGCTGGGCGCTTCA 121908836 21567 NM_003722.4(TP63):c.728G>A (p.Arg243Gln) TP63 Oct 15, 1999 MedGen:C1858562,OMIM:604292 Ectrodactyly, ectodermal dysplasia, and cleft lip/palate syndrome 3 germline 3 189864380 AAGCTGAGCACGTCACGGAGGTGGTGAAGCGGTGCCCCAACCATGAGCTGAGCCGTGAATT -1 446660 NM_001193416.2(DDX3X):c.1769+1G>A DDX3X Sep 13, 2017 MedGen:CN517202 not provided germline X 41347013 CAAGGGTAGCAGTCGTGGACGTTCTAAGAGGTGAGGTATAAATAGTATATAATGAGGGGAA 724159960 171906 NM_002180.2(IGHMBP2):c.1582G>A (p.Ala528Thr) IGHMBP2 Sep 23, 2015 MedGen:C4015349,OMIM:616155,Orphanet:ORPHA443073;MedGen:CN517202 Charcot-Marie-Tooth disease, axonal, type 2S;not provided germline 11 68934508 GTCAGTTTGCACATCCAGGCTCTGGTGGACGCTGGTGTTCCAGCCCGTGACATTGCTGTGG 367543039 51238 NM_000057.3(BLM):c.2643G>A (p.Trp881Ter) BLM Mar 28, 2013 MedGen:C0005859,OMIM:210900,Orphanet:ORPHA125,SNOMED CT:4434006 Bloom syndrome not provided 15 90782909 TAAAAAGGTGGCATTTGATTGCCTAGAATGGATCAGAAAGCACCACCCATGTGAGTACAGC 118204116 16517 NM_000190.3(HMBS):c.647G>A (p.Gly216Asp) HMBS Jul 01, 1997 MedGen:C0162565,OMIM:176000,Orphanet:ORPHA79276,SNOMED CT:234422006 Acute intermittent porphyria germline 11 119092159 TGCACCCTGAGGAATGCATGTATGCTGTGGGCCAGGTACACTTGACCAGGGAAGCCACATG 28929488 32014 NM_001756.3(SERPINA6):c.1165G>A (p.Asp389Asn) SERPINA6 Jan 01, 2007 MedGen:C1852529,OMIM:611489,Orphanet:ORPHA199247 Corticosteroid-binding globulin deficiency germline 14 94304471 TTCAACCAGCCCTTCATCATCATGATCTTCGACCACTTCACCTGGAGCAGCCTTTTCCTGG -1 468787 NM_015295.2(SMCHD1):c.1040+1G>A SMCHD1 May 03, 2017 Gene:2490,MedGen:C1834671,OMIM:158901 Facioscapulohumeral muscular dystrophy 2 germline 18 2694694 TTATTTCCACCTTTGGACACGACAGTTAGCGTAAGTAATTATATTTGGCTTAGGAAATGTT 794727046 461685 NM_000256.3(MYBPC3):c.1090G>A (p.Ala364Thr) MYBPC3 Feb 03, 2017 Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569 Hypertrophic cardiomyopathy germline 11 47346207 GGCATGAGGCGCGATGAGAAGAAGAGCACAGGTTAGCCCTTCCTCAGAGGGGAGAGGAGAG 80338923 17517 NM_024577.3(SH3TC2):c.1586G>A (p.Arg529His) SH3TC2 Oct 31, 2013 MedGen:C1866636,OMIM:601596,Orphanet:ORPHA99949 Charcot-Marie-Tooth disease, type 4C germline 5 149028146 AGAAGAGCCACATGACCTGGGCCCATGCCCGTCTCTGCTTCCTCCTGGGCCGGCTGAGCAT 886039368 259659 NM_000143.3(FH):c.1500G>A (p.Trp500Ter) FH Jan 17, 2017 MedGen:C0027672,SNOMED CT:699346009;Human Phenotype Ontology:HP:0007437,MedGen:C1708350,OMIM:150800,Orphanet:ORPHA523;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Multiple cutaneous leiomyomas;not provided germline 1 241497861 CTATCTCACAGCAGAGCAGTTTGACGAATGGGTAAAACCTAAGGACATGCTGGGTCCAAAG 121907937 19061 NM_000152.4(GAA):c.1561G>A (p.Glu521Lys) GAA Nov 20, 2014 MedGen:C0751173;MedGen:C0017921,OMIM:232300,Orphanet:ORPHA365,SNOMED CT:124462004,SNOMED CT:237967002 Glycogen storage disease type II, infantile;Glycogen storage disease, type II germline;unknown 17 80110950 CCAGCAGCGCTTCTCTTGCAGGACATGAACGAGCCTTCCAACTTCATCAGGGGCTCTGAGG 128624218 26338 NM_000033.3(ABCD1):c.796G>A (p.Gly266Arg) ABCD1 Jun 02, 2015 MedGen:C0162309,OMIM:300100,Orphanet:ORPHA43,SNOMED CT:65389002 Adrenoleukodystrophy germline X 153726062 AACGTGCTGCGGGCCTTCTCGCCCAAGTTCGGGGAGCTGGTGGCAGAGGAGGCGCGGCGGA 267606873 23914 NM_002181.3(IHH):c.383G>A (p.Arg128Gln) IHH Sep 01, 2009 Human Phenotype Ontology:HP:0009371,MedGen:C1862151,OMIM:112500,Orphanet:ORPHA93388 Type A1 brachydactyly germline 2 219057627 TGATGAACCAGTGGCCCGGTGTGAAGCTGCGGGTGACCGAGGGCTGGGACGAGGACGGCCA 193922204 44739 NM_000138.4(FBN1):c.4460-8G>A FBN1 Jul 14, 2017 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:CN118826,Orphanet:ORPHA91387;MedGen:CN517202;MedGen:CN169374 Marfan syndrome;Marfan syndrome;Thoracic aortic aneurysm and aortic dissection;not provided;not specified germline 15 48468542 CTCAGGTGATAACTCCACTACTCACTGTTCGGTTTTAGATGTGAATGAATGCCTGGATCCA -1 485839 NM_000044.4(AR):c.2044G>A (p.Glu682Lys) AR Jul 08, 2015 MedGen:C0039585,OMIM:300068,SNOMED CT:12313004 Androgen resistance syndrome germline X 67711560 CCCATCTTTCTGAATGTCCTGGAAGCCATTGAGCCAGGTGTAGTGTGTGCTGGACACGACA 397514842 75721 NM_000368.4(TSC1):c.2041+1G>A TSC1 Jun 15, 2015 MedGen:C1854465,OMIM:191100;MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000 Tuberous sclerosis 1;Tuberous sclerosis syndrome germline 9 132904410 GCAAGTCTGTCGACTGGACCCACTTTGGAGGTAAAGTTGTTACTTTAGCTCCAAATCCAGC 397514674 49909 NM_021939.3(FKBP10):c.337G>A (p.Glu113Lys) FKBP10 Apr 02, 2013 Gene:50963,MedGen:C1850168,OMIM:259450 Bruck syndrome 1 germline 17 41817149 GACCGAGGCCTCATGGGCATGTGTGTCAACGAGCGGCGACGCCTCATTGTGCCTCCCCACC 886044900 274480 NM_000169.2(GLA):c.285G>A (p.Trp95Ter) GLA Aug 09, 2016 Human Phenotype Ontology:HP:0001071,MedGen:C0002986,OMIM:301500,Orphanet:ORPHA324,SNOMED CT:16652001 Fabry disease germline X 101403895 TTATGAGTACCTCTGCATTGATGACTGTTGGATGGCTCCCCAAAGAGATTCAGAAGGCAGA 1057518572 360059 NM_130799.2(MEN1):c.913-1G>A MEN1 Nov 29, 2016 MedGen:CN517202 not provided germline 11 64806369 CCTGAGGATCCTCTGCCTCACCTCCATCCAGGGCATTGCCTCAGCCAAGACCTACTATCGG 121908987 21885 NM_016203.3(PRKAG2):c.905G>A (p.Arg302Gln) PRKAG2 Aug 10, 2017 MedGen:C1833236,OMIM:600858;MedGen:C1849813,OMIM:261740,Orphanet:ORPHA439854;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:C0043202,OMIM:194200,Orphanet:ORPHA907,SNOMED CT:74390002;MedGen:CN517202 Familial hypertrophic cardiomyopathy 6;Glycogen storage disease of heart, lethal congenital;Primary familial hypertrophic cardiomyopathy;Wolff-Parkinson-White pattern;not provided germline 7 151576412 CCTTCTTTGCTTTGGTAGCCAACGGTGTCCGAGCAGCGCCACTGTGGGAGAGTAAAAAACA 794727680 194695 NM_138694.3(PKHD1):c.7194G>A (p.Trp2398Ter) PKHD1 Jun 11, 2014 MedGen:C0085548,OMIM:263200,Orphanet:ORPHA731,SNOMED CT:28770003 Autosomal recessive polycystic kidney disease germline 6 51885888 CACCACTCTGTTCCAGAGCTTCACAGTTTGGGAAAGTGCAGGTGGTGCCCAGGTAAGCTTT 121909542 33119 NM_001145.4(ANG):c.155G>A (p.Ser52Asn) ANG Dec 01, 2007 MedGen:C2678468,OMIM:611895 Amyotrophic lateral sclerosis type 9 germline 14 20693719 CACAGGGCCGGGATGACAGATACTGTGAAAGCATCATGAGGAGACGGGGCCTGACCTCACC 121918397 32904 NM_000041.3(APOE):c.488G>A (p.Arg163His) APOE Nov 01, 1990 MedGen:C0020479,OMIM:617347,Orphanet:ORPHA412,SNOMED CT:398796005 Familial type 3 hyperlipoproteinemia germline 19 44908784 TGCGCCTCGCCTCCCACCTGCGCAAGCTGCGTAAGCGGCTCCTCCGCGATGCCGATGACCT 879255105 246453 NM_000527.4(LDLR):c.1997G>A (p.Trp666Ter) LDLR Mar 25, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11120379 ACTCCGCTTCTTCTGCCCCAGGAGTGAACTGGTGTGAGAGGACCACCCTGAGCAATGGCGG 139729994 68418 NM_000492.3(CFTR):c.3468G>A (p.Leu1156=) CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008;MedGen:CN517202;MedGen:CN169374 Cystic fibrosis;not provided;not specified germline;unknown 7 117614713 TGTAAACTCCAGCATAGATGTGGATAGCTTGGTAAGTCTTATCATCTTTTTAACTTTTATG 786204832 187204 NM_002223.3(ITPR2):c.7492G>A (p.Gly2498Ser) ITPR2 Apr 02, 2015 MedGen:C1862871,OMIM:106190,Orphanet:ORPHA468666 Anhidrosis, isolated, with normal sweat glands germline 12 26400166 ACCGTGCTGAACCAGGGCCTCAGGAATGGCGGTGGTGTGGGGGATGTGCTAAGAAGGCCAT 752761437 264713 NM_000282.3(PCCA):c.1284+1G>A PCCA Jun 28, 2016 MedGen:CN517202 not provided germline 13 100302999 CAGTACCAAGAACCGTTACATCTACCTGGTGTAAGTCATTAAGCTGTAATACCAGCTGAAG 755596256 239734 NM_001369.2(DNAH5):c.7034G>A (p.Trp2345Ter) DNAH5 Jul 03, 2017 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244 Ciliary dyskinesia germline 5 13814801 TAATTCTTGATGGTCCAGTAGATGCCATCTGGATTGAAAATCTGAATTCTGTTTTGGATGA 794727183 191871 NM_018849.2(ABCB4):c.2211+1G>A ABCB4 Apr 10, 2015 MedGen:C1865643,OMIM:602347,Orphanet:ORPHA79305 Progressive familial intrahepatic cholestasis 3 germline 7 87423905 TTTTCAGTCATATTCTCAGAGATCATAGCGGTAAGTTTGCAAACACCACATAACAGCCTGA 104894485 20214 NM_005477.2(HCN4):c.1657G>A (p.Asp553Asn) HCN4 Jun 25, 2004 MedGen:C1834144,OMIM:163800 Sick sinus syndrome 2, autosomal dominant germline 15 73325378 CTCCCGCCCGACACCCGGCAGCGCATCCACGACTACTACGAGCACCGCTACCAGGGCAAGA 587779536 106985 NM_000090.3(COL3A1):c.3391G>A (p.Gly1131Ser) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189007912 CAGGGCCCTGCTGGTCAGCAGGGTGCAATCGGCAGTCCAGGACCTGCAGGCCCCAGAGTAA 879253828 224650 NM_000255.3(MUT):c.397G>A (p.Gly133Arg) MUT - MedGen:C1855114,OMIM:251000 Methylmalonic aciduria due to methylmalonyl-CoA mutase deficiency germline 6 49458047 TTTTTCTTTATATATTTAGCTGGTCAGCAGGGATTATCAGTTGCCTTTGATCTGGCGACAC 28931612 31728 NM_130799.2(MEN1):c.76G>A (p.Glu26Lys) MEN1 Apr 25, 2017 MedGen:C2675664;MedGen:CN517202 Parathyroid adenoma, somatic;not provided germline;somatic 11 64810034 ATCGACGACGTGGTGCGCCTGTTTGCTGCCGAGCTGGGCCGAGAGGAGCCGGACCTGGTGC 118192247 34265 NM_004519.3(KCNQ3):c.895G>A (p.Glu299Lys) KCNQ3 Apr 27, 2010 MedGen:C1852581,OMIM:121201 Benign familial neonatal seizures 2 not provided 8 132175491 GTGGATGCACAAGGAGAGGAGATGAAAGAGGAGTTTGAGACCTATGCAGATGCCCTGTGGT 104894875 25732 NM_000266.3(NDP):c.313G>A (p.Ala105Thr) NDP Oct 17, 1997 MedGen:C0266526,OMIM:310600,SNOMED CT:15228007 Atrophia bulborum hereditaria germline X 43949888 TGCTGCCGGCCCCAGACTTCCAAGCTGAAGGCACTGCGGCTGCGATGCTCAGGGGGCATGC 104886277 36074 NM_000495.4(COL4A5):c.4325G>A (p.Gly1442Asp) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108687509 TAGGTACCCGTGGTTTGGATGGTCCCCCTGGTCCAGATGGATTGCAAGGTCCCCCAGGTCC 786204976 187620 NM_003159.2(CDKL5):c.2046+1G>A CDKL5 Jun 27, 2017 MedGen:CN128785;MedGen:C2748910,Orphanet:ORPHA3095;MedGen:C1839333,OMIM:300672 Angelman syndrome-like;Atypical Rett syndrome;Early infantile epileptic encephalopathy 2 de novo;germline X 18608913 TCTTCCTTCCATACACGCCAGAAGTCTGAGGTATGTCACAATAAAATATGCCTGTAAACAT 386834228 70800 NM_000130.4(F5):c.5668G>A (p.Glu1890Lys) F5 - MedGen:CN517202 not provided inherited 1 169525949 GGCTGGTGGCTCCTAAACACAGAGGTTGGAGAAAACCAGAGAGCAGGGATGCAAACGCCAT 886039323 259636 NM_000721.3(CACNA1E):c.1054G>A (p.Gly352Arg) CACNA1E Nov 28, 2016 MedGen:CN517202 not provided germline 1 181651440 GTTCTCAACCTAGTCCTGGGAGTGCTTTCCGGGTGAGCCAGATGTTTCTCTCTTCTTAACT 727502818 172192 NM_001112741.1(KCNC1):c.959G>A (p.Arg320His) KCNC1 May 02, 2017 MedGen:C4015420,OMIM:616187,Orphanet:ORPHA435438 Epilepsy, progressive myoclonic 7 germline 11 17772053 TGCGCGTCGTCCGCTTCGTGCGCATCTTGCGCATCTTTAAGCTGACCCGCCACTTTGTGGG 376607329 48992 NM_002834.4(PTPN11):c.794G>A (p.Arg265Gln) PTPN11 Aug 08, 2017 MeSH:D009634,MedGen:C0028326,Orphanet:ORPHA648,SNOMED CT:205824006;MedGen:C0041409,OMIM:163950;MedGen:CN166718,Orphanet:ORPHA98733;MedGen:CN517202;MedGen:CN169374 Noonan syndrome;Noonan syndrome 1;Rasopathy;not provided;not specified de novo;germline 12 112472981 AACAACAGGAGTGCAAACTTCTCTACAGCCGAAAAGAGGGTCAAAGGCAAGAAAACAAAAA -1 429198 NM_000352.4(ABCC8):c.4450G>A (p.Gly1484Arg) ABCC8 Feb 11, 2016 MedGen:C1257959,OMIM:256450,SNOMED CT:360339005 Persistent hyperinsulinemic hypoglycemia of infancy germline 11 17394361 ATCACAGAAGGCGGGGAGAATTTCAGCCAGGGACAGAGGCAGCTGTTCTGCCTGGCCCGGG 796053356 202291 NM_003165.3(STXBP1):c.569G>A (p.Arg190Gln) STXBP1 Sep 09, 2016 MedGen:CN517202 not provided germline 9 127663344 GTGCCACCCTGAAGGAGTACCCGGCTGTGCGGTATCGGGGGTAAGGCAGTGCACCAGTCTG 886041054 263624 NM_006578.3(GNB5):c.249G>A (p.Gln83=) GNB5 Nov 09, 2016 MedGen:C4310682,OMIM:617173 Intellectual developmental disorder with cardiac arrhythmia germline 15 52153940 AGATAAGAGGAGGATCGTGAGCTCGTCACAGGTATGTCACACCTGCTGCATAACAGGTGAG 142339351 190074 NM_001130698.1(TRPC3):c.2285G>A (p.Arg762His) TRPC3 Feb 01, 2015 MedGen:C4225158,OMIM:616410,Orphanet:ORPHA458798 Spinocerebellar ataxia 41 germline 4 121903030 ATGACAGTGATGTAGAATGGAAGTTTGCTCGTTCAAAACTTTGGTTATCCTATTTTGATGA 121912872 32403 NM_001844.4(COL2A1):c.800G>A (p.Gly267Asp) COL2A1 Jul 01, 2006 MedGen:C1836080,OMIM:609508 Stickler syndrome, type I, nonsyndromic ocular germline 12 47994440 CTGGAAAACCTGGAAAAGCTGGTGAAAGGGGTCCGCCTGGTCCTCAGGTAAACGCCACCGT 1057518897 360989 NM_000296.3(PKD1):c.8311G>A (p.Glu2771Lys) PKD1 Sep 29, 2016 Human Phenotype Ontology:HP:0000822,MedGen:C0497247;Human Phenotype Ontology:HP:0005562,MedGen:C0431718;MedGen:CN517202 Hypertension;Multiple renal cysts;not provided germline;unknown 16 2103746 CGCATCCTCATGCGCTCCCGCGTGCTCAACGAGGAGCCCCTGACGCTGGCGGGCGAGGAGA 794727666 194595 NM_004006.2(DMD):c.5868G>A (p.Trp1956Ter) DMD May 28, 2015 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Becker muscular dystrophy;Duchenne muscular dystrophy germline X 32342154 GCCAACTCAGATCCAGCTCAGCAAGCGCTGGCGGGAAATTGAGAGCAAATTTGCTCAGTTT 766021478 247469 NM_003394.3(WNT10B):c.786G>A (p.Trp262Ter) WNT10B Aug 16, 2016 MedGen:C4310730,OMIM:617073 Tooth agenesis, selective, 8 germline 12 48966479 ATCAGGCAGCTGCCAGTTCAAGACATGCTGGAGGGCGGCCCCAGAGTTCCGGGCAGTGGGG 121908217 23544 NM_001127221.1(CACNA1A):c.1748G>A (p.Arg583Gln) CACNA1A Sep 25, 2015 MedGen:C1832894,OMIM:141500;MedGen:C1832903;MedGen:C0752124,OMIM:183086,Orphanet:ORPHA98758;MedGen:CN517202 Familial hemiplegic migraine type 1;Migraine, sporadic hemiplegic;Spinocerebellar ataxia 6;not provided germline 19 13308452 CTGGCACATCCTTTGGAATCAGCGTGTTACGAGCCCTCAGGTTATTGCGTATTTTCAAAGT 63749939 32145 NM_000249.3(MLH1):c.200G>A (p.Gly67Glu) MLH1 Jun 05, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0009405,Orphanet:ORPHA443090;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:C1333991,OMIM:609310;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Hereditary nonpolyposis colon cancer;Lynch syndrome;Lynch syndrome II;not provided germline;unknown 3 36996702 AGTTGATTCAGATCCAAGACAATGGCACCGGGATCAGGGTAAGTAAAACCTCAAAGTAGCA 121912900 32278 NM_000089.3(COL1A2):c.2720G>A (p.Gly907Asp) COL1A2 Feb 15, 1989 MedGen:C0268360,OMIM:166210,SNOMED CT:86470003 Osteogenesis imperfecta, recessive perinatal lethal germline 7 94425163 TTGGCATTGCCGGCCCTCCTGGGGCCCGTGGTCCTCCTGGTGCTGTGGGTAGTCCTGGAGT 397509384 57808 NM_181523.2(PIK3R1):c.893G>A (p.Trp298Ter) PIK3R1 Sep 02, 2014 MedGen:C3554689,OMIM:615214 Agammaglobulinemia 7, autosomal recessive germline 5 68280983 AAGTTATAGAAATTTTAATCTCAACTGAATGGAATGAACGACAGCCTGCACCAGGTAATGC 398124625 102578 NM_213599.2(ANO5):c.41-1G>A ANO5 Mar 30, 2017 MedGen:C1969785,OMIM:611307,Orphanet:ORPHA206549;MedGen:C2750076,OMIM:613319,Orphanet:ORPHA399096;MedGen:CN517202 Limb-girdle muscular dystrophy, type 2L;Miyoshi muscular dystrophy 3;not provided germline 11 22203803 AACATGTTTTTCTCTTTCTTATTTAATTTAGGGGAAAAAGTCAATAAGCATATAGACTACT 769458738 212497 NM_001369.2(DNAH5):c.10616G>A (p.Arg3539His) DNAH5 Aug 09, 2017 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244 Ciliary dyskinesia germline 5 13753489 CTTATTCTGGTCCATTTAACCAAGAGTTTCGTGATCTTCTGTTAAATGACTGGCGGAAGGA 104894779 26636 NM_178152.2(DCX):c.184G>A (p.Asp62Asn) DCX Jan 09, 1998 MedGen:C1848199,OMIM:300067,Orphanet:ORPHA2148;MedGen:C1848070 Lissencephaly, X-linked;Subcortical laminar heterotopia, X-linked germline X 111410215 GCCAAGAAGGTACGTTTCTACCGCAATGGGGACCGCTACTTCAAGGGGATTGTGTACGCTG 1060499797 389218 NM_013296.4(GPSM2):c.977G>A (p.Trp326Ter) GPSM2 Jun 04, 2016 MedGen:CN206424,Orphanet:ORPHA90636 Autosomal recessive non-syndromic sensorineural deafness type DFNB germline 1 108903149 GTTTTAGAATTGGTGAAGGAAGAGCATGTTGGAGCTTAGGAAATGCATACACAGCACTAGG 80338755 29773 NM_000213.4(ITGB4):c.182G>A (p.Cys61Tyr) ITGB4 Jul 07, 2016 MedGen:C1856934,OMIM:226730,Orphanet:ORPHA79403;MedGen:CN517202 Epidermolysis bullosa junctionalis with pyloric atresia;not provided germline 17 75727423 CTTCTGGCCAGATGTTCAGGGACCGGCGCTGCAACACCCAGGCGGAGCTGCTGGCCGCGGG 121434582 31124 NM_002860.3(ALDH18A1):c.251G>A (p.Arg84Gln) ALDH18A1 Nov 22, 2000 MedGen:C0268354,OMIM:219150,Orphanet:ORPHA2962,SNOMED CT:238826008,SNOMED CT:59252009 Cutis laxa-corneal clouding-oligophrenia syndrome germline 10 95643044 TGGTGAAGCTCGGCAGTGCCGTGGTGACCCGAGGGGATGAATGTGGCCTGGCCCTGGGGCG 63751022 95542 NM_000249.3(MLH1):c.2141G>A (p.Trp714Ter) MLH1 May 30, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:C2936783,OMIM:120435 Hereditary cancer-predisposing syndrome;Lynch syndrome;Lynch syndrome I germline 3 37050523 TGCCTGGCTCCATTCCAAACTCCTGGAAGTGGACTGTGGAACACATTGTCTATAAAGCCTT 267606966 18267 NM_013382.5(POMT2):c.737G>A (p.Gly246Asp) POMT2 May 26, 2009 MedGen:C3150416,OMIM:613156 Congenital muscular dystrophy-dystroglycanopathy with mental retardation, type B2 germline 14 77301169 TTGCTGGTGCTTTAGGGGTCAAGTTTGTTGGCCTCTTTATCATCCTTCAAGTGGGGCTGAA 387906475 25609 NM_000133.3(F9):c.79G>A (p.Glu27Lys) F9 Apr 01, 1989 MedGen:C0008533,OMIM:306900,Orphanet:ORPHA98879,SNOMED CT:41788008 Hereditary factor IX deficiency disease germline X 139530843 ATCTGCCTTTTAGGATATCTACTCAGTGCTGAATGTACAGGTTTGTTTCCTTTTTTAAAAT 886041895 264627 NM_001844.4(COL2A1):c.1546G>A (p.Gly516Ser) COL2A1 Jul 31, 2017 MedGen:CN517202 not provided germline 12 47985947 GTGGCTCCTTAGGGTGCTCCCGGCAACCGCGGTTTCCCAGGTCAAGATGGTCTGGCAGGTC 137854481 31501 NM_000138.4(FBN1):c.3095G>A (p.Cys1032Tyr) FBN1 Feb 28, 2017 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:C4016054;MedGen:CN118826,Orphanet:ORPHA91387 Marfan syndrome;Marfan syndrome, neonatal;Thoracic aortic aneurysm and aortic dissection germline 15 48488481 ATTTTCTTATTCTTGAAGATATCAATGAGTGCAAGATGATACCCAGCCTCTGCACCCACGG 397509420 75103 NM_152393.3(KLHL40):c.602G>A (p.Trp201Ter) KLHL40 May 03, 2017 MedGen:C3809209,OMIM:615348 Nemaline myopathy 8 germline 3 42686220 AGGAGGCAGTGTTCGAGGCGGTGATGCGGTGGGCGGGTAGCGGCGACGCCGAGGCGCAGGC 864309536 215111 NM_001271.3(CHD2):c.1502+1G>A CHD2 Sep 10, 2015 MedGen:C3809278,OMIM:615369 Epileptic encephalopathy, childhood-onset germline 15 92949077 TCTAAACTGGCTAGCTCATTCCTGGTGCAAGTAGGTAGAAAAATATGAGTGCAATTTTCCT 121918097 28501 NM_000371.3(TTR):c.218G>A (p.Gly73Glu) TTR Jul 10, 2001 MedGen:C3151470 AMYLOIDOSIS, LEPTOMENINGEAL, TRANSTHYRETIN-RELATED germline 18 31595137 TCACACCTTATAGGAAAACCAGTGAGTCTGGAGAGCTGCATGGGCTCACAACTGAGGAGGA 1064793002 404659 NM_015318.3(ARHGEF18):c.1143+5G>A ARHGEF18 Apr 07, 2017 MedGen:CN241844,OMIM:617433 Retinitis pigmentosa 78 germline 19 7456408 ATCAGAAATACGTCTTTGCTTCTGTGGTATGTATCCTGTCTCTTCAGACGAAGGGTCGGCT 63750652 34357 NM_014043.3(CHMP2B):c.532-1G>A CHMP2B Oct 04, 2012 MedGen:C1833296,OMIM:600795 Frontotemporal Dementia, Chromosome 3-Linked not provided 3 87253711 GCACGTTTGTCTTTTTCATTGTTTAATATAGATGGCCAAAGCTCCATCAGCTGCTCGAAGC 80338798 34193 NM_002880.3(RAF1):c.1456G>A (p.Asp486Asn) RAF1 Nov 16, 2010 MedGen:C0175704,Orphanet:ORPHA500 Noonan syndrome with multiple lentigines not provided 3 12585761 CTCCATGAAGGCTTAACAGTGAAAATTGGAGATTTTGGTTTGGCAACAGTAAAGTCACGCT -1 481106 NM_014585.5(SLC40A1):c.1481G>A (p.Gly494Asp) SLC40A1 May 14, 2012 MedGen:C1853733,OMIM:606069,Orphanet:ORPHA139491 Hemochromatosis type 4 germline 2 189562113 TAATTGAATCTGAAAGAGGCATTATAAATGGTGTACAGAACTCCATGAACTATCTTCTTGA 63750303 95813 NM_000249.3(MLH1):c.731G>A (p.Gly244Asp) MLH1 Jun 16, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Hereditary cancer-predisposing syndrome;Lynch syndrome germline 3 37014485 AGGATAAAACCCTAGCCTTCAAAATGAATGGTTACATATCCAATGCAAACTACTCAGTGAA 137852249 25641 NM_000133.3(F9):c.881G>A (p.Arg294Gln) F9 Mar 01, 1992 MedGen:C0008533,OMIM:306900,Orphanet:ORPHA98879,SNOMED CT:41788008 Hereditary factor IX deficiency disease germline X 139561566 TTGAGGAGACAGAACATACAGAGCAAAAGCGAAATGTGATTCGAATTATTCCTCACCACAA 587777583 151138 NM_001167734.1(VARS2):c.1135G>A (p.Ala379Thr) VARS2 Jul 02, 2014 MedGen:C4014660,OMIM:615917,Orphanet:ORPHA420728 Combined oxidative phosphorylation deficiency 20 germline 6 30918886 CCAGAGACGCTGCCTGGAGATGTGGCTGTGGCCGTTCATCCAGACGACTCGCGATACACAG 104894969 24786 NM_003140.2(SRY):c.192G>A (p.Met64Ile) SRY Nov 29, 1990 MedGen:C2748896,OMIM:400044 46,XY sex reversal, type 1 germline Y 2787412 CAACGTCCAGGATAGAGTGAAGCGACCCATGAACGCATTCATCGTGTGGTCTCGCGATCAG 121908185 19531 NM_020451.2(SELENON):c.1397G>A (p.Arg466Gln) SELENON Apr 28, 2017 MedGen:C0410180,OMIM:602771,SNOMED CT:240063002;MedGen:CN517202 Eichsfeld type congenital muscular dystrophy;not provided germline 1 25813890 CCCTTCTGTCTTCCTGAACAGGTTCAGGGCGGACTCTCCGGGAGACTGTCCTGGAAAGTTC 1060501002 404289 NM_000166.5(GJB1):c.65G>A (p.Arg22Gln) GJB1 Jul 17, 2017 MedGen:CN118851;MedGen:CN517202 Charcot-Marie-Tooth Neuropathy X;not provided germline X 71223772 GCGTGAACCGGCATTCTACTGCCATTGGCCGAGTATGGCTCTCGGTCATCTTCATCTTCAG 1057520790 374412 NM_015272.4(RPGRIP1L):c.1700-1G>A RPGRIP1L Jun 23, 2015 MedGen:CN517202 not provided germline 16 53652988 AAATCTCTAAACTGTGTGTCTTCTCTTGCAGCCCAATTAAAGGATATTGCCTATGGCACCA 104894751 25881 NM_000054.4(AVPR2):c.213G>A (p.Trp71Ter) AVPR2 Sep 01, 1993 MedGen:C1563705,OMIM:304800 Nephrogenic diabetes insipidus, X-linked germline X 153905719 CCTAGCTCGGCGGGGCCGGCGGGGCCACTGGGCACCCATACACGTCTTCATTGGCCACTTG 397516077 51966 NM_000256.3(MYBPC3):c.821+5G>A MYBPC3 Jan 01, 2016 MedGen:C1861862,OMIM:115197;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005 Familial hypertrophic cardiomyopathy 4;Primary familial hypertrophic cardiomyopathy germline 11 47347852 GACCTCCTATCAGCCTTCCGCCGCACGTGAGTGGCCATCCTCAGGGCCTGGGGGAGGCCAG 886041817 264856 NM_000088.3(COL1A1):c.2119G>A (p.Gly707Ser) COL1A1 Jun 06, 2016 MedGen:CN517202 not provided germline 17 50191796 CGAGGGGCCAACGGTGCTCCCGGCAACGATGGTGCTAAGGTGAGGGCAGCGTGGAAGGGGC 863225273 214484 NM_198056.2(SCN5A):c.4772G>A (p.Trp1591Ter) SCN5A Jul 01, 2015 MedGen:C1142166,Orphanet:ORPHA130,SNOMED CT:418818005 Brugada syndrome germline 3 38554320 CCCTGCGCCACTACTACTTCACCAACAGCTGGAATATCTTCGACTTCGTGGTTGTCATCCT 61752064 104816 NM_000330.3(RS1):c.288G>A (p.Trp96Ter) RS1 Sep 07, 2017 MedGen:CN517202 not provided germline X 18647229 GGAGCAGTATGTGGGCTGGTATTCTTCGTGGACTGCAAACAAGGCCCGGCTCAACAGTCAA 58695352 409463 NM_001171.5(ABCC6):c.4081G>A (p.Asp1361Asn) ABCC6 Aug 18, 2015 MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005;MedGen:CN517202 Pseudoxanthoma elasticum;not provided germline 16 16154755 CTGTTCCCTGGCTCTCTGCGGATGAACCTCGACCTGCTGCAGGAGCACTCGGACGAGGCTA 730882213 181459 NM_138422.3(ADAT3):c.430G>A (p.Val144Met) ADAT3 May 05, 2017 MedGen:C3809039,OMIM:615286,Orphanet:ORPHA363528;MedGen:CN517202 Mental retardation, autosomal recessive 36;not provided germline 19 1912477 CGCGGCCTGGGGCAACCCTTCCTGGTGCCCGTGCCCGCCCGGCCGCCTCTGACCAGGGGCC 786205704 188298 NM_032492.3(JAGN1):c.40G>A (p.Gly14Ser) JAGN1 Jan 01, 2013 Human Phenotype Ontology:HP:0005541,MedGen:C1853118,Orphanet:ORPHA42738 Severe congenital neutropenia germline 3 9890762 CGAGCAGGCCCGCGAGCGGCCGGCACCGACGGCAGCGACTTTCAGCACCGGGAGCGCGTCG 104895505 16624 NM_001127255.1(NLRP7):c.2471+1G>A NLRP7 Mar 01, 2006 MedGen:C2931618,OMIM:231090,Orphanet:ORPHA254685 Hydatidiform mole germline 19 54934488 ACGCCCAAAACACTTCCTGCAGATGTTGTCGTAAGTCTCCTCTTCCCATGGGCAGCTCTGG 397515965 51792 NM_000256.3(MYBPC3):c.2454G>A (p.Trp818Ter) MYBPC3 Jul 31, 2017 Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Hypertrophic cardiomyopathy;Primary familial hypertrophic cardiomyopathy;not provided germline 11 47337539 GGAGCGCAAGAAGAAGAAGAGCTACCGGTGGATGCGGCTGAACTTCGACCTGATTCAGGAG -1 472477 NM_001128425.1(MUTYH):c.308G>A (p.Trp103Ter) MUTYH Sep 06, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 1 45333453 TCACAGCCTTCCGAGGGAGCCTGCTAAGCTGGTACGACCAAGAGAAACGGGACCTACCATG 121918374 28229 NM_006907.3(PYCR1):c.797G>A (p.Arg266Gln) PYCR1 Apr 12, 2017 MedGen:C2751987,OMIM:612940,Orphanet:ORPHA357064;MedGen:CN517202 Autosomal recessive cutis laxa type 2B;not provided germline 17 81934326 ACGCTGTGGAGGCCTCCTGCATCCGCACACGGTGGGCCCCCGCGCTGCCCGCTTCCCTGGT 386352319 97393 NM_000890.3(KCNJ5):c.451G>A (p.Gly151Arg) KCNJ5 Apr 23, 2017 MedGen:C4017656;MedGen:C3150933,OMIM:613677,Orphanet:ORPHA251274;MedGen:CN517202 Aldosterone-producing adrenal adenoma, somatic;Familial hyperaldosteronism type 3;not provided somatic 11 128911724 CTGTTCTCCATTGAGACCGAAACAACCATTGGGTATGGCTTCCGAGTCATCACAGAGAAGT -1 481871 NM_030751.5(ZEB1):c.3G>A (p.Met1Ile) ZEB1 Apr 20, 2016 MedGen:CN517202 not provided germline 10 31319237 CGAGCATTTAGACACAAGCGAGAGGATCATGGCGGATGGCCCCAGGTGTAAGCGCAGAAAG 587776615 20191 NM_020632.2(ATP6V0A4):c.1691+1G>A ATP6V0A4 Sep 01, 2000 MedGen:C1864498,OMIM:602722,Orphanet:ORPHA402041 Renal tubular acidosis, distal, autosomal recessive germline 7 138734135 CGGTGTCATCCTCAGCCTTTTCAATCACATGTAAGTTTCTTGATGCACTCTCTGCCTGCTC 397516675 176451 NM_001399.4(EDA):c.822G>A (p.Trp274Ter) EDA Aug 21, 2013 Human Phenotype Ontology:HP:0007607,MedGen:C1706004,Orphanet:ORPHA238468 Hypohidrotic ectodermal dysplasia germline X 70033426 AGATCTTTCAGGTGGAGTGCTCAATGACTGGTCTCGCATCACTATGAACCCCAAGGTGTTT 104895301 48325 NM_000431.3(MVK):c.604G>A (p.Gly202Arg) MVK Apr 26, 2017 MedGen:C0398691,OMIM:260920,Orphanet:ORPHA343,SNOMED CT:234538002;MedGen:C1959626,OMIM:610377,Orphanet:ORPHA29;MedGen:C1867981,OMIM:175900 Hyperimmunoglobulin D with periodic fever;Mevalonic aciduria;Porokeratosis, disseminated superficial actinic 1 not provided 12 109586098 GGGGAGAGAATGATTCACGGGAACCCCTCCGGAGTGGACAATGCTGTCAGCACCTGGGGTA 398123934 100483 NM_004006.2(DMD):c.3276+1G>A DMD Oct 13, 2013 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009;MedGen:C3668940,OMIM:302045;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Becker muscular dystrophy;Dilated cardiomyopathy 3B;Duchenne muscular dystrophy germline X 32464585 ATTCTAAAAAAGCAGCTGAAACAGTGCAGAGTAAGATTTTTATATGATGCCTTTAATATGA 772180415 222992 NM_000520.5(HEXA):c.964G>A (p.Asp322Asn) HEXA Oct 02, 2011 MedGen:C0039373,OMIM:272800,Orphanet:ORPHA845,SNOMED CT:111385000 Tay-Sachs disease germline 15 72349101 TTCCCAGATTTTTATCTTCATCTTGGAGGAGATGAGGTTGATTTCACCTGCTGGTATGAGC 762773298 481667 NM_001298.2(CNGA3):c.513G>A (p.Trp171Ter) CNGA3 Nov 28, 2017 MedGen:CN517202 not provided germline 2 98389721 GGACCCGTCCAGCAACCTGTACTACCGCTGGCTGACCGCCATCGCCCTGCCTGTCTTCTAT 121918031 28617 NM_000301.3(PLG):c.1848G>A (p.Trp616Ter) PLG Aug 01, 1997 MedGen:C1968804,OMIM:217090,Orphanet:ORPHA722 Plasminogen deficiency, type I germline 6 160738583 CTGTGGAGGCACCTTGATATCCCCAGAGTGGGTGTTGACTGCTGCCCACTGCTTGGAGAAG 66693137 103026 NM_000531.5(OTC):c.216+1G>A OTC - MedGen:CN517202 not provided unknown X 38367430 CTGAAATTTAGGATAAAACAGAAAGGAGAGGTATGTAACATTTTCTTTTTACGTTCCATTA 397508279 68023 NM_000492.3(CFTR):c.170G>A (p.Trp57Ter) CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline 7 117509039 GGTCCCACTTTTTATTCTTTTGCAGAGAATGGGATAGAGAGCTGGCTTCAAAGAAAAATCC 121912433 29793 NM_000454.4(SOD1):c.124G>A (p.Gly42Ser) SOD1 Mar 04, 1993 MedGen:C1862939,OMIM:105400 Amyotrophic lateral sclerosis type 1 germline 21 31663841 GTGTGGGGAAGCATTAAAGGACTGACTGAAGGCCTGCATGGATTCCATGTTCATGAGTTTG 201304511 236723 NM_003052.4(SLC34A1):c.644+1G>A SLC34A1 Oct 06, 2016 OMIM:616963 Hypercalcemia, infantile, 2 germline 5 177387874 GCAGGCGGGGGACAGGACTGACTTCCGGCGGTGAGGGGGGCTGGGGGTTGGGGGCTCGTGC 104894181 28751 NM_001083116.2(PRF1):c.1286G>A (p.Gly429Glu) PRF1 Dec 03, 1999 MedGen:C1863727,OMIM:603553 Hemophagocytic lymphohistiocytosis, familial, 2 germline 10 70598435 TGACCTTCATCCAAGCATGGGGCCTGTGGGGGGACTGGTTCACTGCCACGGATGCCTATGT 587776433 165629 NC_012920.1:m.3481G>A MT-ND1 Apr 17, 2014 MedGen:C0023264,OMIM:256000,Orphanet:ORPHA506,SNOMED CT:29570005 Leigh syndrome germline MT 3481 TTCGCTGACGCCATAAAACTCTTCACCAAAGAGCCCCTAAAACCCGCCACATCTACCATCA 775924858 246116 NM_000527.4(LDLR):c.1358+1G>A LDLR Mar 30, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11113450 GTCTGACCTGTCCCAGAGAATGATCTGCAGGTGAGCGTCGCCCCTGCCTGCAGCCTTGGCC 397515775 51481 NM_000138.4(FBN1):c.2495G>A (p.Cys832Tyr) FBN1 May 07, 2015 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:CN517202 Marfan syndrome;not provided germline 15 48495513 AGAACAGCCCAGGCTCTTTTATTTGTGAATGTTCTTCTGAAAGTACTTTGGATCCAACAAA 794729231 198649 NM_000052.6(ATP7A):c.1947-1G>A ATP7A Mar 26, 2014 MedGen:C0022716,OMIM:309400,Orphanet:ORPHA565,SNOMED CT:59178007 Menkes kinky-hair syndrome germline X 78011448 GATTTTTCTTTTTTTATTTTTTCCATATAAGATGGAGACGGTCTTTTCTTGTGAGTCTGTT 398123208 98457 NM_000169.2(GLA):c.242G>A (p.Trp81Ter) GLA May 28, 2013 Human Phenotype Ontology:HP:0001071,MedGen:C0002986,OMIM:301500,Orphanet:ORPHA324,SNOMED CT:16652001;MedGen:CN517202 Fabry disease;not provided germline X 101403938 AGATGGCAGAGCTCATGGTCTCAGAAGGCTGGAAGGATGCAGGTTATGAGTACCTCTGCAT 112406105 200333 NM_000018.3(ACADVL):c.1097G>A (p.Arg366His) ACADVL Jun 09, 2016 MedGen:C3887523,OMIM:201475,Orphanet:ORPHA26793,SNOMED CT:237996001,SNOMED CT:237997005;MedGen:CN517202 Very long chain acyl-CoA dehydrogenase deficiency;not provided germline;unknown 17 7223152 CCCTCTTCCAGGTAGATCATGCCACTAATCGTACCCAGTTTGGGGAGAAAATTCACAACTT 104894421 22714 NM_002312.3(LIG4):c.833G>A (p.Arg278His) LIG4 Dec 01, 2001 MedGen:C1847827,OMIM:606593,Orphanet:ORPHA99812 Lig4 syndrome germline 13 108210436 TCTACATAGAAACCAAGCTAGATGGTGAACGTATGCAAATGCACAAAGATGGAGATGTATA 137852465 25358 NM_000132.3(F8):c.6533G>A (p.Arg2178His) F8 Jan 01, 1995 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154863124 TCCGTTTGCACCCAACTCATTATAGCATTCGCAGCACTCTTCGCATGGAGTTGATGGGCTG 797045166 205687 NM_006767.3(LZTR1):c.740G>A (p.Ser247Asn) LZTR1 Jun 01, 2015 MedGen:C4225280,OMIM:616564 Noonan syndrome 10 germline 22 20990474 GGGACAAGATGTTTGTATTCTCTGGGCAAAGCGGAGCCAAAATAACCAACAACCTCTTCCA 886037739 178838 NM_001145394.1(TSEN2):c.757G>A (p.Gly253Arg) TSEN2 Jun 01, 2013 MedGen:C2676466,OMIM:612389 Pontocerebellar hypoplasia type 2B germline 3 12516635 TTTCAGGCCTTTTTCTTGGTCTATGCTCTGGGATGTTTAAGTATTTACTATGAGAAGGTAA -1 441953 NM_000458.3(HNF1B):c.344+1G>A HNF1B Dec 07, 2016 MedGen:CN517202 not provided germline 17 37744540 GCAGCGGGCGGAGGTGGACCGGATGCTCAGGTAGGCGCAGAGCGAGGTGGAGGGGACCCAC 587784149 168222 NM_022455.4(NSD1):c.5432G>A (p.Arg1811Gln) NSD1 Feb 08, 2013 MedGen:CN035106,OMIM:117550 Sotos syndrome 1 germline 5 177269730 CTAATGACTATTTGTGGACTCACCAGGCCCGAGTCTTCCCTTACATGGAGGGTGACGTGAG 121908630 21070 NM_001128227.2(GNE):c.766G>A (p.Asp256Asn) GNE Sep 01, 2001 MedGen:C1853926,OMIM:605820 Nonaka myopathy germline 9 36236928 ATTGTTGCACTACAGCACCCTGTGACCACTGACATTAAGCATTCCATAAAAATGTTTGAAT 45488893 58572 NM_000548.4(TSC2):c.648+1G>A TSC2 Dec 04, 2013 MedGen:C1860707,OMIM:613254;MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000 Tuberous sclerosis 2;Tuberous sclerosis syndrome germline 16 2056245 GTCCGGACCGCGTCCTCTGTGGACATAGAGGTCAGTGCCTCCCCTCCCCAGGGCCGGCCCA 63750798 426809 NM_001171.5(ABCC6):c.4182G>A (p.Lys1394=) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16154654 GGCCAGCCTGCCCGGCCAGCTGCAGTACAAGTGTGCTGACCGAGGCGAGGACCTGAGGTAT 794728708 196513 NM_001035.2(RYR2):c.527G>A (p.Arg176Gln) RYR2 Mar 21, 2017 MedGen:C1631597,Orphanet:ORPHA3286;MedGen:C4053736,OMIM:604772;MedGen:CN517202 Catecholaminergic polymorphic ventricular tachycardia;Catecholaminergic polymorphic ventricular tachycardia type 1;not provided germline 1 237377386 CTAAGCAGCGATCAGAAGGAGAAAAAGTACGAGTTGGAGATGACCTCATCTTAGTTAGCGT 80357219 70211 NM_007294.3(BRCA1):c.5345G>A (p.Trp1782Ter) BRCA1 Jan 27, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome germline 17 43049182 TCTAAATGTCCATTTTAGATCAACTGGAATGGATGGTACAGCTGTGTGGTGCTTCTGTGGT 104886191 35886 NM_000495.4(COL4A5):c.2624G>A (p.Gly875Glu) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108620373 CAGGGATCCCCGGAGCACCTGGTCCTATAGGACCTCCAGGATCACCAGGGCTTCCAGGAAA 5030852 15638 NM_000277.2(PAH):c.842+1G>A PAH Jul 24, 2017 MedGen:C0031485,OMIM:261600,Orphanet:ORPHA716,SNOMED CT:154735006;MedGen:CN517202 Phenylketonuria;not provided germline;unknown 12 102852814 TGGATCCAAGCCCATGTATACCCCCGAACCGTGAGTACTGTCCTCCAGCTACCAGTTGCCA 886041377 264582 NM_024570.3(RNASEH2B):c.3G>A (p.Met1Ile) RNASEH2B May 16, 2016 MedGen:CN517202 not provided germline 13 50910079 CTGCGGCGCCCCGGAAGAGGCGGGCGGCATGGCCGCTGGCGTGGACTGCGGGGACGGGGTT 397515323 75256 NM_005391.4(PDK3):c.473G>A (p.Arg158His) PDK3 Apr 01, 2013 MedGen:C3806702,OMIM:300905,Orphanet:ORPHA352675 Charcot-Marie-Tooth disease, X-linked dominant, 6 germline X 24503479 AATATTTTCTGGATCGGTTTTATACCAACCGCATCTCTTTCCGCATGCTTATTAATCAGCA 397515451 75129 NM_138638.4(CFL2):c.19G>A (p.Val7Met) CFL2 Jul 01, 2012 MedGen:C1853154,OMIM:610687 Nemaline myopathy 7 germline 14 34713546 TGTGTTTATTTTCAGGCTTCTGGAGTTACAGTGAATGATGAAGTCATCAAAGTTTTTAATG 879254955 434304 NM_000527.4(LDLR):c.1603G>A (p.Asp535Asn) LDLR - MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11116110 TGTCCTCCCACCAGCTTCATGTACTGGACTGACTGGGGAACTCCCGCCAAGATCAAGAAAG 62637014 20604 NM_014336.4(AIPL1):c.834G>A (p.Trp278Ter) AIPL1 Jun 14, 2016 MedGen:CN239169;MeSH:D057130,MedGen:C0339527,Orphanet:ORPHA65,SNOMED CT:193413001;MedGen:C1858386,OMIM:604393;MedGen:CN517202 AIPL1-Related Disorders;Leber congenital amaurosis;Leber congenital amaurosis 4;not provided germline;unknown 17 6425781 CGTGCGTGCCCGGGCTCACGCAGAGGTGTGGAATGAGGCCGAGGCCAAGGCGGACCTCCAG 879254554 245603 NM_000527.4(LDLR):c.514G>A (p.Asp172Asn) LDLR Dec 16, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11105420 CCCCAGCTGTGGGCCTGCGACAACGACCCCGACTGCGAAGATGGCTCGGATGAGTGGCCGC 104894812 25472 NM_000166.5(GJB1):c.415G>A (p.Val139Met) GJB1 Jul 28, 2017 MedGen:CN118851;MedGen:C0393808,OMIM:302800,Orphanet:ORPHA101075,SNOMED CT:230552007 Charcot-Marie-Tooth Neuropathy X;X-linked hereditary motor and sensory neuropathy germline X 71224122 GGGACACTGTGGTGGACCTATGTCATCAGCGTGGTGTTCCGGCTGTTGTTTGAGGCCGTCT 794728931 196905 NM_198056.2(SCN5A):c.3575G>A (p.Trp1192Ter) SCN5A Sep 05, 2014 MedGen:CN517202 not provided germline 3 38575388 ACACCACACAGGCCCCAGGGAAGGTCTGGTGGCGGTTGCGCAAGACCTGCTACCACATCGT 786205118 39913 NM_005198.4(CHKB):c.677+1G>A CHKB Jun 10, 2011 MedGen:C1865233,OMIM:602541,Orphanet:ORPHA280671 Muscular dystrophy, congenital, megaconial type germline 22 50580564 CAGCCTGAAGGATGAGATGGGCAACCTCAGGTGAGGGCAGGCAGGACAAGGCTAATGGTAA 886044582 275146 NM_004006.2(DMD):c.358-1G>A DMD Sep 19, 2016 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009 Becker muscular dystrophy germline X 32816641 TTTTCTTATGAAAATTTATTTCCACATGTAGGTCAAAAATGTAATGAAAAATATCATGGCT 1057517809 359852 NM_000314.6(PTEN):c.1027-1G>A PTEN Dec 05, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline 10 87965286 TGGGTTTTCATTTTAAATTTTCTTTCTCTAGGTGAAGCTGTACTTCACAAAAACAGTAGAG 781444670 194786 NM_000071.2(CBS):c.374G>A (p.Arg125Gln) CBS Jul 11, 2017 MedGen:C3150344,OMIM:236200 Homocystinuria due to CBS deficiency germline 21 43066320 GCGGGAGCGTGAAGGACCGCATCAGCCTGCGGATGATTGAGGATGCTGAGCGCGACGGGAC 878853159 237519 NM_004924.5(ACTN4):c.584G>A (p.Gly195Asp) ACTN4 Feb 08, 2017 MedGen:C0333497,OMIM:603278 Focal segmental glomerulosclerosis 1 germline 19 38708128 TTTGCCTTTCCTTCCCCAGCTGGAAGGATGGTCTTGCCTTCAATGCCCTGATCCACCGGCA 886041163 264364 NM_017780.3(CHD7):c.434G>A (p.Trp145Ter) CHD7 Jun 06, 2016 MedGen:CN517202 not provided germline 8 60741866 GGCAATCCTTTGTGGACAGCAGCTCCATGTGGGGCCCCAGGGCTGTTCAGGTACCAGACCA 869312837 226544 NM_003664.4(AP3B1):c.716G>A (p.Trp239Ter) AP3B1 Jan 01, 2016 MedGen:C1842362,OMIM:608233,Orphanet:ORPHA183678 Hermansky Pudlak syndrome 2 germline 5 78216125 TATGTAACTTACTAGTGGATGTTGAAGAGTGGGGGCAGGTTGTCATAATCCACATGCTAAC 879255592 227006 NM_130837.2(OPA1):c.1817G>A (p.Cys606Tyr) OPA1 Aug 18, 2016 MedGen:C1852267,OMIM:125250,Orphanet:ORPHA1215 Autosomal dominant optic atrophy plus syndrome germline 3 193647127 CAAGAAATTTAAGCCTTGCAGTATCAGACTGCTTTTGGAAAATGGTACGAGAGTCTGTTGA 58606740 264213 NM_000297.3(PKD2):c.1094+1G>A PKD2 Sep 30, 2016 MedGen:CN517202 not provided germline 4 88038502 GGCTCCCTTTGGGCCCCGAAATGGAACCGCGTAAGTGTCTGTGACTCATTGCCACTCGGTG -1 429634 NM_000275.2(OCA2):c.2080-1G>A OCA2 Jan 12, 2017 MedGen:C0268495,OMIM:203200,Orphanet:ORPHA79432,SNOMED CT:26336006 Tyrosinase-positive oculocutaneous albinism germline 15 27871923 ACTGATTCTCACCACACATCCTTTCTTCTAGGCATTGGCACATCTCCACTTAATAGAATAT 587779541 107123 NM_000090.3(COL3A1):c.2285G>A (p.Gly762Asp) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189001398 AAATTAAAAAATATTTTTATTTCCTCTAGGGTCCTACTGGTCCTATTGGTCCTCCTGGCCC 121909342 23440 NM_004082.4(DCTN1):c.175G>A (p.Gly59Ser) DCTN1 Sep 30, 2010 MedGen:C1843315,OMIM:607641 Distal hereditary motor neuronopathy type 7B germline 2 74378104 GCCACACTGTTTGCCACTGGCAAATGGGTAGGCGTGATTCTGGATGAAGCAAAGGGCAAAA 1085307126 413913 NM_001195.4(BFSP1):c.1042G>A (p.Asp348Asn) BFSP1 May 09, 2017 MedGen:C3808107,OMIM:611391 Cataract 33, multiple types germline 20 17496938 GTCTCTCTCAGCACTGGATCCGGTGGGAAAGGTAACGCTCCCCAACACTGGACTTCTGTTT 121908104 19289 NM_001080467.2(MYO5B):c.1125G>A (p.Trp375Ter) MYO5B Oct 01, 2008 MedGen:C0341306,OMIM:251850,Orphanet:ORPHA2290,SNOMED CT:235729009 Congenital microvillous atrophy germline 18 49974547 AGGGGTGGAGCACAGTCAGATGGAGCACTGGCTGTGTCATCGCAAGCTGGTCACCACCTCG 796052212 196428 NM_014176.3(UBE2T):c.179+5G>A UBE2T Jun 04, 2015 MedGen:C4084840,OMIM:616435 Fanconi anemia, complementation group T germline 1 202334984 AAGCTAGAAGTTATCATTCCTGAGAGGTTAGTATGAATCAGCTTCTCAACCTACATGGTGA 80359149 67384 NM_000059.3(BRCA2):c.8970G>A (p.Trp2990Ter) BRCA2 May 26, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome germline 13 32379766 CTTTCTCCAAACAGTTATACTGAGTATTTGGCGTCCATCATCAGATTTATATTCTCTGTTA 587784332 379852 NM_003560.3(PLA2G6):c.1501G>A (p.Glu501Lys) PLA2G6 Jun 04, 2015 MedGen:CN517202 not provided germline 22 38123185 CTCATCATCATCCAGCTCCTCATCGCCATCGAGAAGGCCTCGGGTGTGGCCACCAAGGACC 121908792 57842 NM_000492.3(CFTR):c.274-1G>A CFTR Apr 24, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008;MedGen:C0238339,OMIM:167800,Orphanet:ORPHA676,SNOMED CT:68072000;MedGen:CN517202 Cystic fibrosis;Hereditary pancreatitis;not provided de novo;germline;unknown 7 117530898 ATTTAATTTCTCTGTTTTTCCCCTTTTGTAGGAAGTCACCAAAGCAGTACAGCCTCTCTTA 189115557 195238 NM_000404.3(GLB1):c.602G>A (p.Arg201His) GLB1 Jul 05, 2017 MedGen:CN169666;MedGen:C0268272,OMIM:230600,Orphanet:ORPHA79256,SNOMED CT:18756002;MedGen:C0268273,OMIM:230650,Orphanet:ORPHA79257;MedGen:C0268271,OMIM:230500,Orphanet:ORPHA79255,SNOMED CT:238026007;MedGen:C0086652,OMIM:253010,Orphanet:ORPHA309310,SNOMED CT:238044004;MedGen:CN517202 GLB1-Related Disorders;GM1 gangliosidosis type 2;Gangliosidosis GM1 type 3;Infantile GM1 gangliosidosis;Mucopolysaccharidosis, MPS-IV-B;not provided germline 3 33058220 GCTACTTTGCCTGTGATTTTGACTACCTGCGCTTCCTGCAGAAGCGCTTTCGCCACCATCT 121912607 17031 NM_182896.2(ARL13B):c.246G>A (p.Trp82Ter) ARL13B Feb 23, 2015 MedGen:C2676771,OMIM:612291 Joubert syndrome 8 germline;unknown 3 94003774 GGGAGGTGGAATAAGAATTCGGGGAATCTGGAAGAATTACTATGCTGAATCCTATGGGGTA 193302867 47614 NM_016938.4(EFEMP2):c.376G>A (p.Glu126Lys) EFEMP2 Jan 11, 2016 MedGen:C3280798,OMIM:614437;MedGen:CN033664,OMIM:219100 Autosomal recessive cutis laxa type 1B;Autosomal recessive cutis laxa type IA germline 11 65870650 GGCTGAGTGGTGTCTCTCGCAGATGTGGACGAGTGTGCCCAGGCCCTGCACGACTGTCGCC -1 470574 NM_000033.3(ABCD1):c.1772G>A (p.Arg591Gln) ABCD1 Jul 14, 2017 MedGen:C0162309,OMIM:300100,Orphanet:ORPHA43,SNOMED CT:65389002 Adrenoleukodystrophy germline X 153740711 ACGTCGTGCACCTGCACCACATCCTGCAGCGGGAGGGAGGTAGGAGGCCTGGGGCTGGCAG 1131691052 432027 NM_003000.2(SDHB):c.642+1G>A SDHB - MedGen:C1708353,Orphanet:ORPHA29072 Hereditary Paraganglioma-Pheochromocytoma Syndromes germline 1 17023972 AAATATCTGGGGCCTGCAGTTCTTATGCAGGTGAGGTGCTCCTTAATTGCTTTAAGAGAAA 794727026 191012 NM_001844.4(COL2A1):c.762+1G>A COL2A1 Jan 21, 2015 MedGen:C2020284,OMIM:108300 Stickler syndrome type 1 germline 12 47995254 CCTGGTCCCCCTGGAAAGCCTGGTGATGATGTGAGTATACACGAGTAGACAAATGAGGAGC 63750457 360154 NM_001171.5(ABCC6):c.3491G>A (p.Arg1164Gln) ABCC6 Sep 30, 2016 MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005;MedGen:CN517202 Pseudoxanthoma elasticum;not provided germline 16 16163008 TAGATGAAAGCCAGAGGATCAGTTTCCCGCGACTGGTGGCTGACAGGTAGGAAGAGCCAGG 863225264 214480 NM_004958.3(MTOR):c.5395G>A (p.Glu1799Lys) MTOR Jan 09, 2017 MedGen:C4225259,OMIM:616638,Orphanet:ORPHA457485;MedGen:CN517202 Smith-Kingsmore syndrome;not provided germline 1 11130747 GCCTGGCATGCGTGGGCAGTGATGAACTTCGAAGCTGTGCTACACTACAAACATCAGAACC 5030859 15651 NM_000277.2(PAH):c.1223G>A (p.Arg408Gln) PAH Mar 15, 2016 MedGen:C0031485,OMIM:261600,Orphanet:ORPHA716,SNOMED CT:154735006;MedGen:CN517202 Phenylketonuria;not provided germline;unknown 12 102840492 GTCTTAGGAACTTTGCTGCCACAATACCTCGGCCCTTCTCAGTTCGCTACGACCCATACAC 121434397 21186 NM_001166292.1(PTCH2):c.2156G>A (p.Arg719Gln) PTCH2 May 01, 2008 MedGen:C0004779,OMIM:109400,Orphanet:ORPHA377,SNOMED CT:69408002 Gorlin syndrome germline 1 44827617 ACGGCCTGGCCCTGACGGATGTGGTGCCTCGGGGCACCAAGGAGCATGCCTTCCTGAGCGC 199472756 67820 NM_000218.2(KCNQ1):c.973G>A (p.Gly325Arg) KCNQ1 Jul 07, 2017 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MeSH:D008133,MedGen:C0023976,SNOMED CT:9651007;MedGen:CN517202 Congenital long QT syndrome;Long QT syndrome;not provided germline 11 2583486 TATGGGGACAAGGTGCCCCAGACGTGGGTCGGGAAGACCATCGCCTCCTGCTTCTCTGTCT 797044845 204409 NM_000530.7(MPZ):c.181G>A (p.Asp61Asn) MPZ Mar 26, 2015 MedGen:C0270912,OMIM:118200,Orphanet:ORPHA101082,SNOMED CT:42986003 Charcot-Marie-Tooth disease, demyelinating, type 1b germline 1 161307311 TCCTTCTGGTCCAGTGAGTGGGTCTCAGATGACATCTCCTTCACCTGGCGCTACCAGCCCG 121918578 28151 NM_000440.2(PDE6A):c.1683G>A (p.Trp561Ter) PDE6A Dec 01, 1995 MedGen:C3151139,OMIM:613810 Retinitis pigmentosa 43 germline 5 149895228 GGGCTACCGCAAGATCACCTACCACAACTGGCGGCACGGCTTCAACGTGGGGCAGACCATG 28989182 21803 NM_001211.5(BUB1B):c.2441G>A (p.Arg814His) BUB1B Jul 27, 2015 MedGen:CN031748,OMIM:257300;MedGen:C1864389,OMIM:176430 Mosaic variegated aneuploidy syndrome 1;Premature chromatid separation trait germline 15 40212554 ACTTTTATATCAACCTCAAGTTAAAGGAACGTTTAAATGAAGATTTTGATCATTTTTGCAG 372949028 205386 NM_152906.6(TANGO2):c.605+1G>A TANGO2 Apr 13, 2017 MedGen:CN232560;MedGen:C0003811,OMIM:115000;MedGen:CN232559;MedGen:C0025362,SNOMED CT:228156007,SNOMED CT:91138005;MedGen:CN232558;MedGen:C4225171,OMIM:616878 Acute rhabdomyolysis;Cardiac arrhythmia;Episodic flaccid weakness;Intellectual functioning disability;Seizures;TANGO2-Related Metabolic Encephalopathy and Arrhythmias germline 22 20061684 CCTCCTGGATGTGCTCAACAATGAAGAGGCGTGAGTGGGCGGGTCCTGCTGGGGTGAGCCC -1 433168 NM_000296.3(PKD1):c.11153G>A (p.Arg3718Gln) PKD1 Oct 03, 2016 MedGen:CN169374 not specified germline 16 2092954 TGCACAGCCGGGCCTTCCTGGCCATCACGCGGTACGGGCATCCGGTGCACTGGTCTGTCTT 121917833 27140 NM_000196.3(HSD11B2):c.667G>A (p.Asp223Asn) HSD11B2 Jun 01, 2003 MedGen:C2936861,OMIM:218030 Apparent mineralocorticoid excess germline 16 67436251 AGCTGCCCCACTCCCAATCCATCCGCAGGGGACATGCCATATCCGTGCTTGGGGGCCTATG 772823083 414993 NM_024577.3(SH3TC2):c.3676-8G>A SH3TC2 Apr 13, 2017 MedGen:CN517202 not provided germline 5 149004910 AATGCTGTCTCTTCTTTGCCCCCATACCACGGGGTTAGGATGCCCATGATGCCACTGAGTA 397514669 49835 NM_013319.2(UBIAD1):c.530G>A (p.Gly177Glu) UBIAD1 Feb 01, 2013 Human Phenotype Ontology:HP:0007760,MedGen:C0271287,OMIM:121800,Orphanet:ORPHA98967,SNOMED CT:39662004,SNOMED CT:419395007 Schnyder crystalline corneal dystrophy germline 1 11285644 ACACCAACTCTCTGGATTTTCTGGCCGCAGGAATTGGATTCAAGTACGTGGCTCTGGGAGA 370290043 264217 NM_022464.4(SIL1):c.1030-9G>A SIL1 Mar 30, 2016 MedGen:CN517202 not provided germline 5 138947482 CCCCCACCCTACCTGGCCTGCGGCTGTGGCGGATGGCAGATGTTCGCCGAGGAGGAGGCTG 587779634 107112 NM_000090.3(COL3A1):c.1844G>A (p.Gly615Glu) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188997364 AGGGTCCTCCTGGAAAGAATGGTGAAACTGGACCTCAGGGACCCCCAGGGCCTACTGTAAG 761477436 224639 NM_000255.3(MUT):c.850G>A (p.Gly284Arg) MUT - MedGen:C1855114,OMIM:251000 Methylmalonic aciduria due to methylmalonyl-CoA mutase deficiency germline 6 49456141 ATTCTGGAGCTGGCCTATACTTTAGCAGATGGATTGGAGTACTCTAGAACTGGACTCCAGG 150739647 79585 NM_000448.2(RAG1):c.2924G>A (p.Arg975Gln) RAG1 Sep 26, 2017 MedGen:CN517202 not provided germline 11 36576228 AGTCTGGTAACAAACTGTTTAGGCGCTTCCGGAAAATGAATGCCAGGCAGTCCAAATGCTA 74315305 23463 NM_000396.3(CTSK):c.236G>A (p.Gly79Glu) CTSK Oct 01, 1999 MedGen:C0238402,OMIM:265800,Orphanet:ORPHA763,SNOMED CT:89647000 Pyknodysostosis germline 1 150806109 ATACATATGAACTGGCTATGAACCACCTGGGGGACATGGCAAGTATAGCTTCAGCTCCTGT 80357284 46214 NM_007294.3(BRCA1):c.5346G>A (p.Trp1782Ter) BRCA1 Jun 09, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline;unknown 17 43049181 CTAAATGTCCATTTTAGATCAACTGGAATGGATGGTACAGCTGTGTGGTGCTTCTGTGGTG 370717845 247363 NM_152419.2(HGSNAT):c.518G>A (p.Gly173Asp) HGSNAT Aug 03, 2016 MedGen:C0086649,OMIM:252930,Orphanet:ORPHA79271,SNOMED CT:75238000 Mucopolysaccharidosis, MPS-III-C inherited;not applicable 8 43161462 TTCTAGCTGTGAGCATTGCATTCCTTATTGGTCTTGCTGTCATCATTGTGATATCCTTTCT 104894871 25722 NM_000266.3(NDP):c.287G>A (p.Cys96Tyr) NDP Oct 01, 1992 MedGen:C0266526,OMIM:310600,SNOMED CT:15228007 Atrophia bulborum hereditaria germline X 43949914 AGCAACCCTTCCGTTCCTCCTGTCACTGCTGCCGGCCCCAGACTTCCAAGCTGAAGGCACT 730880597 179184 NM_000256.3(MYBPC3):c.3641G>A (p.Trp1214Ter) MYBPC3 Nov 13, 2015 MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Primary familial hypertrophic cardiomyopathy;not provided germline 11 47332245 CTTTACCTTATTTATAGCCCAAGATTTCCTGGTTCAAGAATGGCCTGGACCTGGGAGAAGA 879254867 246105 NM_000527.4(LDLR):c.1329G>A (p.Trp443Ter) LDLR Mar 25, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11113420 CACGGAGGTGGCCAGCAATAGAATCTACTGGTCTGACCTGTCCCAGAGAATGATCTGCAGG 80359211 46791 NM_000059.3(BRCA2):c.9380G>A (p.Trp3127Ter) BRCA2 Mar 07, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 2;Hereditary cancer-predisposing syndrome;not provided germline 13 32394812 ATATGTTAATTGCTGCAAGCAACCTCCAGTGGCGACCAGAATCCAAATCAGGCCTTCTTAC 387906882 39364 NM_006790.2(MYOT):c.17G>A (p.Arg6His) MYOT Aug 01, 2011 MedGen:C1834659,OMIM:159000,Orphanet:ORPHA266 Limb-girdle muscular dystrophy, type 1A germline 5 137870668 TATACCAACTAAGCATGTTTAACTACGAACGTCCAAAACACTTCATCCAGTCCCAAAACCC 104886173 35847 NM_000495.4(COL4A5):c.2315G>A (p.Gly772Asp) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108606812 CAGGACTTCCAGGTTTCAAAGGAGCACTTGGTCCAAAAGGTGATCGTGGTTTCCCAGGACC 387906618 38627 NM_004415.3(DSP):c.7097G>A (p.Arg2366His) DSP Jul 01, 2011 MedGen:C1843292,OMIM:607655,Orphanet:ORPHA293165 Skin fragility woolly hair syndrome germline 6 7584359 AGGAACTCATCGAAAAGGGCCACGGTATTCGCTTATTAGAAGCACAGATCGCAACCGGGGG 137853862 34119 NM_001129765.1(NSDHL):c.370G>A (p.Gly124Ser) NSDHL Feb 01, 2011 MedGen:C0265267,OMIM:308050,Orphanet:ORPHA139,SNOMED CT:17608003 Child syndrome not provided X 152858872 AAGGAGCTCTTTTATAGAGTGAATTACATTGGCACCAAGAATGTCATTGAAACTTGCAAAG 1114167287 243984 NM_000521.3(HEXB):c.170G>A (p.Trp57Ter) HEXB Jan 10, 2016 MedGen:C0036161,OMIM:268800,Orphanet:ORPHA796,SNOMED CT:23849003 Sandhoff disease inherited 5 74685430 GCGTCTCGGCCAAGCCGGGGCCGGCGCTGTGGCCCCTGCCGCTCTTGGTGAAGATGACCCC 886039915 260979 NM_001273.3(CHD4):c.3203G>A (p.Arg1068His) CHD4 Jan 24, 2017 MedGen:C4310688,OMIM:617159 Sifrim-Hitz-Weiss syndrome germline 12 6591713 TGCTCAAGAACCTTAAGGAGGGTGGGCATCGTGTACTCATCTTTTCCCAGGTATCATGTGG 747539101 264981 NM_016327.2(UPB1):c.873+1G>A UPB1 Jul 08, 2016 MedGen:CN517202 not provided germline 22 24520469 TTCACCTGCGCCATCAATCGAGTGGGCACCGTAAGTCCCGAGGTCTGGCTGGGGAGAGGAG 774877657 247459 NM_020812.3(DOCK6):c.3154G>A (p.Glu1052Lys) DOCK6 Aug 11, 2016 MedGen:C3280182,OMIM:614219 Adams-Oliver syndrome 2 germline 19 11222821 ATGGAATTCACCCGCATCCTGTGCAGCCACGAGCACTACGTGACCCTCAACCTCCCCTGCT 140614802 244107 NM_152328.4(ADSSL1):c.781G>A (p.Asp261Asn) ADSSL1 Jul 15, 2016 MedGen:C4310754,OMIM:617030 Myopathy, distal, 5 germline 14 104741231 CTGGTGGAGGGTGCCAACGCCGCCCTCCTCGACATTGACTTCGGTATGTCCGGGAGGGTGT 104886261 36019 NM_000495.4(COL4A5):c.3731G>A (p.Gly1244Asp) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108668445 AGGGTCCCCCAGGCCCTCCTGGTTCTCCGGGTCCAGCTCTGGAAGGACCTAAAGGCAACCC 397515373 22744 NM_005259.2(MSTN):c.373+5G>A MSTN Jul 03, 2013 MedGen:C0236033,OMIM:614160 Muscle hypertrophy germline 2 190062219 AACAATCATTACCATGCCTACAGAGTGTAAGTAGTCCTATTAGTGTATATCAACAGTTCTG -1 442313 NM_000383.3(AIRE):c.1365G>A (p.Trp455Ter) AIRE Oct 25, 2016 MedGen:CN517202 not provided germline 21 44293875 GTGTACTCACTGCGCCGCTGCCTTCCACTGGCGCTGCCACTTCCCAGCCGGCACCTCCCGG 119103233 17206 NM_007214.4(SEC63):c.173G>A (p.Trp58Ter) SEC63 Jun 01, 2004 MedGen:C4310769,OMIM:617004 Polycystic liver disease 2 germline 6 107929466 ATATCAGAAAAGTATATGGAAGGTGTATGTGGTATCGTTTACGGTTATTAAAACCCCAGCC -1 432185 NM_000444.5(PHEX):c.1965+1G>A PHEX Jun 12, 2017 MedGen:C0733682,OMIM:307800,Orphanet:ORPHA89936,SNOMED CT:82236004 Familial X-linked hypophosphatemic vitamin D refractory rickets germline X 22226509 GATAATGGAGGCCTGCGGGAAGCTTTTAGGGTATGCGCTGCTACATTTACCGTGGTTCTAA 1057520660 365260 NM_001128425.1(MUTYH):c.463-1G>A MUTYH May 11, 2017 MedGen:C1837991,OMIM:608456,Orphanet:ORPHA247798;MedGen:CN517202 MYH-associated polyposis;not provided germline 1 45332960 CTTGTCTCTTTCTGCCTGCCTGTGGCTATAGAAGTGGCCTACACTGCAGGACCTGGCCAGT 121912519 29424 NM_000233.3(LHCGR):c.1713G>A (p.Met571Ile) LHCGR Feb 01, 1995 MedGen:C0342549,OMIM:176410,Orphanet:ORPHA3000,SNOMED CT:237818003 Gonadotropin-independent familial sexual precocity germline 2 48688084 CAATAAAGATACAAAGATTGCTAAGAAAATGGCAATCCTCATCTTCACCGATTTCACCTGC 1064794284 410426 NM_001128849.1(SMARCA4):c.2654G>A (p.Arg885His) SMARCA4 Feb 16, 2017 MedGen:CN517202 not provided germline 19 11021762 GGAAGTACATGATTGTGGACGAAGGTCACCGCATGAAGAACCACCACTGCAAGCTGACGCA 122461161 26520 NM_014271.3(IL1RAPL1):c.1460G>A (p.Trp487Ter) IL1RAPL1 Mar 01, 2006 MedGen:C0796227,OMIM:300143 Mental retardation 21, X-linked germline X 29955189 TGACCCCAAATTACGTAGTTAGAAGGGGCTGGAGCATCTTTGAGCTGGAAACCAGACTTCG 786204831 187203 NM_003047.4(SLC9A1):c.913G>A (p.Gly305Arg) SLC9A1 Apr 02, 2015 MedGen:C4225383,OMIM:616291,Orphanet:ORPHA448251 Lichtenstein-knorr syndrome germline 1 27109678 TTCCTGAGCTTCTTCGTGGTGGCCCTGGGCGGGGTGCTTGTGGGCGTGGTCTACGGGGTCA 387907032 39816 NM_138361.5(LRSAM1):c.1914G>A (p.Glu638=) LRSAM1 Aug 26, 2010 Gene:431712,MedGen:C3280797,OMIM:614436,Orphanet:ORPHA300319 Charcot-Marie-Tooth disease type 2P germline 9 127501011 GGCTCAGTCTGTCTGTCTGGTCCCCACAGAGCTGAAACCACCAATGGGTGAGGTCGTCACC 886039788 260549 NM_012343.3(NNT):c.598G>A (p.Gly200Ser) NNT Oct 11, 2016 na GLUCOCORTICOID DEFICIENCY 4 WITH MINERALOCORTICOID DEFICIENCY germline 5 43616064 GATGCGCTAAGCTCCATGGCCAACATTGCGGGGTAGGTTCTTTTCCATTTCAATTGAACAA 63750978 406263 NM_000249.3(MLH1):c.2142G>A (p.Trp714Ter) MLH1 Jul 03, 2017 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:CN517202 Lynch syndrome;not provided germline 3 37050524 GCCTGGCTCCATTCCAAACTCCTGGAAGTGGACTGTGGAACACATTGTCTATAAAGCCTTG 762826555 188878 NM_178170.2(NEK8):c.1401G>A (p.Trp467Ter) NEK8 Feb 14, 2018 MedGen:C3809434,OMIM:615415;MedGen:CN517202 Renal-hepatic-pancreatic dysplasia 2;not provided germline 17 28739185 CCTGTCCACTGAGCGAGAACTATTTGCCTGGGGCCGTGGAGACAGCGGTAAGCTCCAGCCT 104893721 20965 NM_006580.3(CLDN16):c.715G>A (p.Gly239Arg) CLDN16 Jun 01, 2000 MedGen:C0268448,OMIM:248250,Orphanet:ORPHA31043,SNOMED CT:80710001 Primary hypomagnesemia germline 3 190408436 CAATATAAATTTGGTTGGTCCTGTTGGCTCGGAATGGCTGGGTCTCTGGGTTGCTTTTTGG 745750156 359179 NM_032171.2(CEP78):c.1254+5G>A CEP78 May 18, 2017 MedGen:C4310657,OMIM:617236 Cone-rod dystrophy and hearing loss germline 9 78253282 CACGTGATATATGTAATCAGTTGCAGGTACGTAGTTACCATGTTTATAATATGTAGGGGAT 1131691763 422366 NM_000211.4(ITGB2):c.741+1G>A ITGB2 Nov 13, 2015 MedGen:CN517202 not provided germline 21 44901491 GACGCCATGATGCAGGTCGCCGCCTGCCCGGTGAGGCCGCTGCCCCTGCTTGGGTCCCCAC 1060500355 401871 NM_000267.3(NF1):c.6858+1G>A NF1 Feb 02, 2017 MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003 Neurofibromatosis, type 1 germline 17 31338806 CTAACCAAATTACAGCCACTTCTTAATAAGGTAATTACTGTATAGAAAATGAGTGCATTCA 193922818 136954 NM_000540.2(RYR1):c.7523G>A (p.Arg2508His) RYR1 Mar 29, 2017 MedGen:CN239331;MedGen:CN517202 RYR1-Related Disorders;not provided germline;unknown 19 38500899 ACAAGGCGTCCATGGTGCTCTTCCTGGACCGTGTGTATGGCATCGAGAACCAGGACTTCTT 104894410 32073 NM_004004.5(GJB2):c.175G>A (p.Gly59Ser) GJB2 Jul 30, 2005 MedGen:C0266004,OMIM:149200,Orphanet:ORPHA2698,SNOMED CT:1271009 Knuckle pads, deafness AND leukonychia syndrome germline 13 20189407 GCCGACTTTGTCTGCAACACCCTGCAGCCAGGCTGCAAGAACGTGTGCTACGATCACTACT 74315479 18123 NM_000487.5(ARSA):c.1150G>A (p.Glu384Lys) ARSA Apr 18, 2013 MedGen:C4017096;MedGen:C0023522,OMIM:250100,Orphanet:ORPHA512,SNOMED CT:396338004 Arylsulfatase a pseudodeficiency, intermediate;Metachromatic leukodystrophy germline 22 50625639 TCTCTCTTCTTCTACCCGTCCTACCCAGACGAGGTCCGTGGGGTTTTTGCTGTGCGGACTG 387907287 45790 NM_004984.3(KIF5A):c.611G>A (p.Arg204Gln) KIF5A Jun 24, 2016 MedGen:C0037772;MedGen:C1858712,OMIM:604187,Orphanet:ORPHA100991 Spastic paraplegia;Spastic paraplegia 10 germline 12 57567515 CTCCTGCAGACATGAATGAACACAGCTCTCGGAGCCACAGCATCTTCCTCATCAACATCAA 121908127 19494 NM_004937.2(CTNS):c.1015G>A (p.Gly339Arg) CTNS Sep 09, 2016 MedGen:C0010690,OMIM:219800 Nephropathic cystinosis germline;unknown 17 3660280 ATCTTCGGAGACCCAACCAAGTTTGGACTCGGGGTCTTCTCCATCGTCTTCGACGTCGTCT -1 429977 NM_004247.3(EFTUD2):c.2198G>A (p.Trp733Ter) EFTUD2 Jan 21, 2016 MedGen:C1864652,OMIM:610536,Orphanet:ORPHA79113 Growth and mental retardation, mandibulofacial dysostosis, microcephaly, and cleft palate germline 17 44854617 ATTGGGATCTGCTGGCTGCCCGTTCCATCTGGGCTTTTGGCCCTGATGCGACTGGCCCCAA 1057517684 359137 NM_207421.4(PADI6):c.1618G>A (p.Gly540Arg) PADI6 Dec 02, 2016 MedGen:C4310659,OMIM:617234 Preimplantation embryonic lethality 2 germline 1 17395663 GAGCTTAGAGCAGATCAGCTCCTGTCTAATGGTAAGGGAACTCCCTTTCCACAGAACAGAA 371265106 98286 NM_000050.4(ASS1):c.836G>A (p.Arg279Gln) ASS1 Jun 01, 2016 MedGen:C0175683,OMIM:215700,Orphanet:ORPHA187 Citrullinemia type I germline;unknown 9 130480447 TGGAGAACCGCTTCATTGGAATGAAGTCCCGAGGTGAGTCTGCTCAGCCTCCCTCAGGGCC 80338820 18097 NM_000487.5(ARSA):c.1210+1G>A ARSA Jan 24, 2017 MedGen:C0023522,OMIM:250100,Orphanet:ORPHA512,SNOMED CT:396338004;MedGen:C0751276,Orphanet:ORPHA309263,SNOMED CT:44359008 Metachromatic leukodystrophy;Metachromatic leukodystrophy, juvenile type germline;unknown 22 50625578 GAAAGTACAAGGCTCACTTCTTCACCCAGGGTAACCCCTCCCCGTGGATCCCTCCCCCCGA 771507094 214433 NM_004366.5(CLCN2):c.1412G>A (p.Arg471His) CLCN2 Sep 09, 2015 MedGen:C3810242,OMIM:615651,Orphanet:ORPHA363540 Leukoencephalopathy with ataxia germline 3 184354643 CCCCCCTCCCTGAAGGAGCAGCATTTGGGCGTCTGGTGGGTGAAAGCATGGCTGCCTGGTT 397516354 52559 NM_000363.4(TNNI3):c.485G>A (p.Arg162Gln) TNNI3 Jul 05, 2017 MedGen:C2750091,OMIM:613286;MedGen:C2678474,OMIM:611880;MedGen:C1860752,OMIM:613690;MedGen:C1861861,OMIM:115210;Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Dilated cardiomyopathy 1FF;Dilated cardiomyopathy 2A;Familial hypertrophic cardiomyopathy 7;Familial restrictive cardiomyopathy 1;Hypertrophic cardiomyopathy;Primary familial hypertrophic cardiomyopathy;not provided germline;unknown 19 55154094 ATGCCATGATGCAGGCGCTGCTGGGGGCCCGGGCTAAGGAGTCCCTGGACCTGCGGGCCCA 63750874 426780 NM_001171.5(ABCC6):c.4501G>A (p.Gly1501Ser) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16150144 GGCCTGTTTTACAGACTGGCCCAGGAGTCAGGCCTGGTCTGAGCCAGGACCCTCAACCGTA 587776965 59506 NM_024769.3(CLMP):c.821G>A (p.Arg274Gln) CLMP Mar 01, 2012 Human Phenotype Ontology:HP:0004389,MedGen:C0021847,OMIM:615237 Congenital short bowel syndrome germline 11 123074702 ATGAGGAAGAAGAGAGACCTAATGAAATTCGGTAAACCTCCCACATCCCTACTTTTACGGG 312262721 49791 NM_025137.3(SPG11):c.869+1G>A SPG11 Jan 31, 2013 MedGen:C1858479,OMIM:604360,Orphanet:ORPHA2822 Spastic paraplegia 11, autosomal recessive not provided 15 44657094 AGTTGCTCTTAACTTAAATTTGTATTTCAGGTATGTAGATGACTGCAGTTTCTAATTTGAG 28933674 25319 NM_000132.3(F8):c.5526G>A (p.Met1842Ile) F8 Dec 01, 1993 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154904871 AACTTACTTTTGGAAAGTGCAACATCATATGGCACCCACTAAAGATGAGTTTGACTGCAAA 104886263 36022 NM_000495.4(COL4A5):c.3763G>A (p.Gly1255Arg) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108668477 CCAGCTCTGGAAGGACCTAAAGGCAACCCTGGGCCCCAAGGTCCTCCTGGGAGACCAGGTA 137852910 17938 NM_000419.4(ITGA2B):c.1063G>A (p.Glu355Lys) ITGA2B Sep 01, 1998 MedGen:C0040015,OMIM:273800,Orphanet:ORPHA849,SNOMED CT:32942005 Glanzmann thrombasthenia germline 17 44383640 ATGGAGAGCCGGGCAGACCGAAAACTGGCCGAAGTGGGGCGTGTGTATTTGTTCCTGCAGC 1064795602 405130 NM_005465.4(AKT3):c.964G>A (p.Asp322Asn) AKT3 Sep 12, 2017 MedGen:CN517202 not provided germline 1 243552928 TGATTTCACTTTTAGGTGTTAGAAGATAATGACTATGGCCGAGCAGTAGACTGGTGGGGCC 1060502926 393026 NM_000179.2(MSH6):c.3556+1G>A MSH6 Aug 10, 2016 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Lynch syndrome germline 2 47805028 GACTTGGTGCCTCAGACAGAATAATGTCAGGTGAGTTTTTTGTTTCCCACTTAAGTTCTCA 886041007 263165 NM_006087.3(TUBB4A):c.730G>A (p.Gly244Ser) TUBB4A Jul 05, 2016 MedGen:C2676244,OMIM:612438,Orphanet:ORPHA139441 Leukodystrophy, hypomyelinating, 6 germline 19 6495769 AGCGGGGTCACCACCTGCCTGCGCTTCCCGGGCCAGCTGAACGCCGACCTGCGCAAGCTGG 72547568 260161 NM_000382.2(ALDH3A2):c.733G>A (p.Asp245Asn) ALDH3A2 Jun 01, 2017 MedGen:C0037231,OMIM:270200,Orphanet:ORPHA816,SNOMED CT:111303009;MedGen:CN517202 Sjögren-Larsson syndrome;not provided germline 17 19657797 ATGAATTGTGGCCAAACCTGCATTGCACCCGACTATATTCTCTGTGAAGCATCCCTCCAAA 863223534 209957 NM_000118.3(ENG):c.446G>A (p.Trp149Ter) ENG May 15, 2014 MedGen:CN517202 not provided germline 9 127826587 CATCCTTCCCCAAGACCCAGATCCTTGAGTGGGCAGCTGAGAGGGGCCCCATCACCTCTGC 398123698 100033 NM_003361.3(UMOD):c.944G>A (p.Cys315Tyr) UMOD Jun 10, 2013 MedGen:CN517202 not provided germline 16 20348252 ACTGCAAATCGAATAATGGCAGATGGCACTGCCAGTGCAAACAGGACTTCAACATCACTGG 121434560 31814 NM_000234.2(LIG1):c.1696G>A (p.Glu566Lys) LIG1 Jun 20, 1992 MedGen:C4016019 DNA ligase I deficiency germline 19 48133011 AAACGCTTTGAGGAGGCAGCTTTCACCTGCGAATACAAATATGACGGGCAGAGGGCACAGG 63750217 32138 NM_000249.3(MLH1):c.2041G>A (p.Ala681Thr) MLH1 Aug 23, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0009405,Orphanet:ORPHA443090;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:C1333991,OMIM:609310;MedGen:CN517202;MedGen:CN169374 Hereditary cancer-predisposing syndrome;Hereditary nonpolyposis colon cancer;Lynch syndrome;Lynch syndrome II;not provided;not specified germline;unknown 3 37048955 GAATGTTTTGAAAGCCTCAGTAAAGAATGCGCTATGTTCTATTCCATCCGGAAGCAGTACA 587784266 169352 NM_000430.3(PAFAH1B1):c.405G>A (p.Trp135Ter) PAFAH1B1 Feb 08, 2013 MedGen:C1843916,OMIM:607432 Lissencephaly 1 germline 17 2670168 AACCAATTTTCTGTTCACTTGACAGGTGTGGGATTATGAGACTGGAGATTTTGAACGAACT 797045390 209292 NM_000052.6(ATP7A):c.3943G>A (p.Gly1315Arg) ATP7A Feb 08, 2013 MedGen:C0022716,OMIM:309400,Orphanet:ORPHA565,SNOMED CT:59178007 Menkes kinky-hair syndrome germline X 78042726 GACTCCCCAGCTCTGGCAATGGCTAATGTGGGAATTGCTATTGGCACAGGCACAGATGTAG 199473000 78294 NM_000238.3(KCNH2):c.2417G>A (p.Gly806Glu) KCNH2 May 10, 2014 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MedGen:CN517202 Congenital long QT syndrome;not provided germline 7 150949031 CATGGCCTCCAGGGAAGAATGACATCTTTGGGGAGCCTCTGAACCTGTATGCAAGGCCTGG 398123240 98511 NM_000194.2(HPRT1):c.384+1G>A HPRT1 Jul 13, 2015 MedGen:C0023374,OMIM:300322,SNOMED CT:10406007 Lesch-Nyhan syndrome germline X 134486531 GGAGATGATCTCTCAACTTTAACTGGAAAGGTATGTATCTTGAAAGGGAAGAAAAAAAAGC 1057518190 359408 NM_015265.3(SATB2):c.1196G>A (p.Arg399His) SATB2 Nov 03, 2016 MedGen:CN517202 not provided germline 2 199328888 TTAATCAGGGATTGTTGTCTGAGATTCTGCGTAAGGAAGAAGACCCTCGGACAGCCTCTCA 1060502053 398102 NM_005097.3(LGI1):c.1128G>A (p.Trp376Ter) LGI1 Jul 14, 2016 MedGen:C1838062,OMIM:600512,Orphanet:ORPHA101046 Epilepsy, lateral temporal lobe, autosomal dominant germline 10 93797257 ATTCTACTCCCATCAATCCTTACACGCGTGGTACAGGGACACTGATGTGGAATATCTAGAA 121909739 31152 NM_006516.2(SLC2A1):c.940G>A (p.Gly314Ser) SLC2A1 Jan 20, 2017 MedGen:C3553859,OMIM:614847;MedGen:CN030711,OMIM:606777;MedGen:C3149117;MedGen:C1842534,OMIM:612126,Orphanet:ORPHA98811;MedGen:CN517202 Epilepsy, idiopathic generalized, susceptibility to, 12;GLUT1 deficiency syndrome 1;GLUT1 deficiency syndrome 1, autosomal recessive;GLUT1 deficiency syndrome 2;not provided germline 1 42929242 CAGCAGCCTGTGTATGCCACCATTGGCTCCGGTATCGTCAACACGGCCTTCACTGTCGTGT 796052977 201571 NM_001165963.1(SCN1A):c.1662G>A (p.Gln554=) SCN1A Jun 10, 2014 MedGen:CN517202 not provided germline 2 166045043 ATATGAAAAGAGGTACTCCTCCCCACACCAGGTATGGCACTGCTGAGTTTACTGATGCATG 587783755 170026 NM_000252.2(MTM1):c.1132G>A (p.Gly378Arg) MTM1 Feb 08, 2013 MedGen:C0410203,OMIM:310400,Orphanet:ORPHA596,SNOMED CT:46804001 Severe X-linked myotubular myopathy germline X 150657899 AAGAGTTCAGTGCTTGTGCATTGCAGTGACGGATGGGACAGGACTGCTCAGCTGACATCCT 587779659 107149 NM_000090.3(COL3A1):c.3023G>A (p.Gly1008Asp) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189005441 AGGGTCTTCCTGGTCTGGCTGGTACAGCTGGTGAACCTGGAAGAGATGTGAGTAGCAGTTT 104894435 24321 NM_000161.2(GCH1):c.323G>A (p.Gly108Asp) GCH1 Jul 01, 1998 MedGen:C2673535,Orphanet:ORPHA101150 Dystonia, dopa-responsive, with or without hyperphenylalaninemia, autosomal recessive germline 14 54902341 CGGCCTCGGCCATGCAGTTCTTCACCAAGGGCTACCAGGAGACCATCTCAGGTCAGTGCGC 281864916 46893 NM_001146040.1(GLRA1):c.737G>A (p.Arg246Gln) GLRA1 Oct 04, 2012 MedGen:C1835614,OMIM:149400,Orphanet:ORPHA3197 Hyperekplexia hereditary not provided 5 151851565 CCTGCATTGAGGCCCGGTTCCACCTGGAGCGGCAGATGGGTTACTACCTGATTCAGATGTA 397508174 67880 NM_000492.3(CFTR):c.1202G>A (p.Trp401Ter) CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline 7 117542101 AAGTAGTGATGGAGAATGTAACAGCCTTCTGGGAGGAGGTCAGAATTTTTAAAAAATTGTT 1057519588 362414 NM_002485.4(NBN):c.1125G>A (p.Trp375Ter) NBN Feb 02, 2017 MedGen:C0398791,OMIM:251260,Orphanet:ORPHA647,SNOMED CT:234638009 Microcephaly, normal intelligence and immunodeficiency germline 8 89955555 TTTACCTTGCATTCTTTTCTTTTTCTACAGGGATTTGAGTGAAAGGCCAAAAGAAATCAAA 374480381 101418 NM_012463.3(ATP6V0A2):c.1514+1G>A ATP6V0A2 Aug 02, 2012 MedGen:C0268355,OMIM:219200,Orphanet:ORPHA357058,SNOMED CT:73856006 Cutis laxa with osteodystrophy germline 12 123744785 CGCAGAGCATAAGAAGATGGTGCTTTGGAAGTAAGTGTCCCATAGCTGGTGATGCTCTGGG 80358094 131306 NM_007294.3(BRCA1):c.5152+1G>A BRCA1 Oct 02, 2015 MedGen:C2676676,OMIM:604370;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 1;Hereditary cancer-predisposing syndrome germline 17 43063873 CGGGAGGAAAATGGGTAGTTAGCTATTTCTGTAAGTATAATACTATTTCTCCCCTCCTCCC 121918378 28237 NM_006907.3(PYCR1):c.752G>A (p.Arg251His) PYCR1 Sep 01, 2009 MedGen:C3280799,OMIM:614438,Orphanet:ORPHA293633 Autosomal recessive cutis laxa type 3B germline 17 81934371 CCTTGCATGTGCTGGAGAGTGGGGGCTTCCGCTCCCTGCTCATCAACGCTGTGGAGGCCTC 113993947 222912 NM_000202.7(IDS):c.508-1G>A IDS May 16, 2007 MedGen:C0026705,OMIM:309900,SNOMED CT:70737009 Mucopolysaccharidosis, MPS-II maternal X 149498308 AAGCTGATGTTATATTATTTTGTTTTGAAAGACATGTCGAGGGCCAGATGGAGAACTCCAT 372227120 68596 NM_000492.3(CFTR):c.4242+1G>A CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline 7 117665565 GAAGCAATGCTGGAATGCCAACAATTTTTGGTGAGTCTTTATAACTTTACTTAAGATCTCA 61064130 29540 NM_170707.3(LMNA):c.1822G>A (p.Gly608Ser) LMNA Jan 08, 2015 MedGen:C0033300,OMIM:176670,Orphanet:ORPHA740,SNOMED CT:238870004;MedGen:CN517202 Hutchinson-Gilford syndrome;not provided germline 1 156138611 GCATCTGCCAGCGGCTCAGGAGCCCAGGTGGGCGGACCCATCTCCTCTGGCTCTTCTGCCT 797045198 206612 NM_033409.3(SLC52A3):c.1255G>A (p.Val419Met) SLC52A3 Mar 17, 2015 MedGen:CN029849,OMIM:211530 Brown-Vialetto-Van Laere syndrome 1 germline 20 761181 TGCCTCAGTTACGTCAAGGTGATGCTGGGCGTGGTCCTGCGCGACCTCAGCCGCAGCGCCC 587777433 139382 NM_181705.3(LYRM7):c.73G>A (p.Asp25Asn) LYRM7 Dec 01, 2013 MedGen:C4014440,OMIM:615838 Mitochondrial complex III deficiency, nuclear type 8 germline 5 131180149 CACAGGACCAGACAACAAGTTTTTAAAAATGATGCCAGAGCATTAGAAGGTAAGTATGTTC 587784036 168508 NM_133433.3(NIPBL):c.7168G>A (p.Ala2390Thr) NIPBL May 05, 2017 MedGen:CN029798,OMIM:122470;MedGen:CN517202 Cornelia de Lange syndrome 1;not provided germline 5 37052471 AGGGGTTTCAGACAAGACGAGTCCTCTAGCGCTTTGTGTTCACACCTTTACTCCATGATCC 121918403 31656 NM_001976.4(ENO3):c.467G>A (p.Gly156Asp) ENO3 Aug 01, 2001 MedGen:C2752027,OMIM:612932,Orphanet:ORPHA99849 Glycogen storage disease type 13 germline 17 4955097 CATCTCAGGCCTTCAATGTGATCAACGGGGGCTCCCATGCTGGAAACAAGCTGGCCATGCA 72556301 103152 NM_000531.5(OTC):c.589G>A (p.Gly197Arg) OTC - MedGen:CN517202 not provided unknown X 38403666 AAAGGTCTTACCCTCAGCTGGATCGGGGATGGGAACAATATCCTGCACTCCATCATGATGA 797044455 224789 NM_001257989.1(TYMP):c.1174G>A (p.Gly392Ser) TYMP Jan 14, 2016 MedGen:C0872218,OMIM:603041,Orphanet:ORPHA298 Mitochondrial DNA depletion syndrome 1 (MNGIE type) germline 22 50526142 AGCCCGCGCCTCTCAGCCCCTCTCCCCGCAGGCACCGTGGAGCTGGTCCGGGCGCTGCCGC 201457110 214526 NM_003737.3(DCHS1):c.7538G>A (p.Arg2513His) DCHS1 Sep 03, 2015 Gene:352956,MedGen:C1843003,OMIM:607829 Mitral valve prolapse 2 germline 11 6624138 CCCTGGAGGCTACAGATGCTGATGGAAGCCGCAGCCATGCCGCTGTGGACTACAGCATCAT 104895362 214395 NM_000431.3(MVK):c.1039+1G>A MVK Oct 01, 2014 MedGen:C1867981,OMIM:175900 Porokeratosis, disseminated superficial actinic 1 germline 12 109595182 GTGGCTGTGGCATCACACTCCTCAAGCCAGGTATCCCGGGGGTAGGTGGGCCAGGCTGCCA 794728777 196687 NM_001035.2(RYR2):c.11836G>A (p.Gly3946Ser) RYR2 May 15, 2017 MedGen:C1631597,Orphanet:ORPHA3286;MedGen:CN517202 Catecholaminergic polymorphic ventricular tachycardia;not provided germline 1 237778726 GCACACAGCAGGCTGTGGGATGCTGTGGTCGGCTTTCTTCATGTGTTTGCCCATATGCAGA 606231334 136663 NM_000257.3(MYH7):c.2163-1G>A MYH7 - MedGen:C0264789,SNOMED CT:35728003 Familial cardiomyopathy not provided 14 23425819 CATGGGTGACTCTGGACACTTCCCTCCTCAGGTATCGCATCCTGAACCCAGCGGCCATCCC 377767345 36169 NM_005359.5(SMAD4):c.1055G>A (p.Gly352Glu) SMAD4 Dec 04, 2012 MedGen:C1832942,OMIM:175050 Juvenile polyposis/hereditary hemorrhagic telangiectasia syndrome not provided 18 51065522 CTTCAAGCTGCCCTATTGTTACTGTTGATGGATACGTGGACCCTTCTGGAGGAGATCGCTT 756623659 244110 NM_198576.3(AGRN):c.226G>A (p.Gly76Ser) AGRN Jul 14, 2016 MedGen:C0751882,Orphanet:ORPHA590 Congenital myasthenic syndrome germline 1 1022225 CCCCAGGTTCGGGTCTGGCGGTACTTGAAGGGCAAAGACCTGGTGGCCCGGGAGAGCCTGC -1 467965 NM_000088.3(COL1A1):c.903+1G>A COL1A1 Jun 22, 2017 MedGen:C0023931,OMIM:166200,SNOMED CT:385482004 Osteogenesis imperfecta type I germline 17 50196483 CCTGGTGAAAATGGAGCTCCTGGTCAGATGGTGAGTGTGCCCAGTTCCAGAGGGCAGGGAT 377767386 47343 NM_005359.5(SMAD4):c.424+1G>A SMAD4 Dec 04, 2012 MedGen:C0345893,OMIM:174900,Orphanet:ORPHA329971,SNOMED CT:9273005 Juvenile polyposis syndrome not provided 18 51048861 ACTACGAACGAGTTGTATCACCTGGAATTGGTAAGTAGACTTTGCTTTCATCCTAAGAAAC 104894953 24809 NM_021083.3(XK):c.941G>A (p.Trp314Ter) XK Nov 01, 2001 MedGen:C0398568,OMIM:300842,Orphanet:ORPHA59306 McLeod neuroacanthocytosis syndrome germline X 37728068 GCCCTGACCTCATCAGCAAGTCCCATAATTGGTACCAGCTACTGGTGTATTACATGATAAG 797044890 205298 NM_013275.5(ANKRD11):c.7569+1G>A ANKRD11 May 03, 2016 MeSH:D030342,MedGen:C0950123;MedGen:CN517202 Inborn genetic diseases;not provided germline 16 89275092 AAGCTGCGTCTACAGCACAGCATCGAGCGGGTAAGTGGGCTGGCACAGGCAGGGGGGCGCC 104886097 35707 NM_000495.4(COL4A5):c.1112G>A (p.Gly371Glu) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108586694 TTGGGTTGCCTGGGTTGCCTGGAGAAAAAGGAGAGCGAGGATTTCCTGGAATACAGGGTCC 137854445 31777 NM_001972.3(ELANE):c.659G>A (p.Arg220Gln) ELANE Aug 14, 2017 MedGen:C0221023,OMIM:162800,Orphanet:ORPHA2686,SNOMED CT:191347008;MedGen:CN517202 Cyclical neutropenia;not provided germline 19 856019 GGCTAATCCACGGAATTGCCTCCTTCGTCCGGGGAGGCTGCGCCTCAGGGCTCTACCCCGA 397518462 94273 NM_013335.3(GMPPA):c.545G>A (p.Gly182Asp) GMPPA Oct 03, 2013 MedGen:C3809738,OMIM:615510 Alacrima, achalasia, and mental retardation syndrome germline 2 219504138 GCACATTTATCAGTGACATCATCAACTGCGGCATCTACCTCTTTTCTCCTGAAGCCTTGAA 886039896 260810 NM_000426.3(LAMA2):c.8665G>A (p.Gly2889Arg) LAMA2 Nov 07, 2017 MedGen:C1263858,OMIM:607855,Orphanet:ORPHA258,SNOMED CT:111503008 Merosin deficient congenital muscular dystrophy inherited 6 129505317 CTGGATGTCGTGGGAATGCTGTATGTTGGTGGGTTACCCATCAACTACACTACCCGAAGAA 104886115 35748 NM_000495.4(COL4A5):c.1406G>A (p.Gly469Glu) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108591627 CAGGATCTCCAGGTGATAAAGGACTCCAAGGAGAACAAGGAGTGAAAGGTTTGATCTCCAA 113994140 17322 NM_153026.2(PRICKLE1):c.311G>A (p.Arg104Gln) PRICKLE1 Jan 19, 2017 MedGen:C2676254,OMIM:612437;MedGen:CN517202 Progressive myoclonus epilepsy with ataxia;not provided germline 12 42469523 AAAAAGAGTTGCAGGTGTTCAGTGCTCAGCGGAAGAAAGAAGCACTGGGAAGAGGAACAAT 199472702 67745 NM_000218.2(KCNQ1):c.604G>A (p.Asp202Asn) KCNQ1 May 12, 2017 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MedGen:CN517202 Congenital long QT syndrome;not provided germline 11 2570754 CGCTTTGCCCGGAAGCCCATTTCCATCATCGGTGAGTCATGCCTGCCCTGTGGAGGTCACG 180177173 200437 NM_000030.2(AGXT):c.139G>A (p.Gly47Arg) AGXT Nov 27, 2014 MedGen:C0268164,OMIM:259900,Orphanet:ORPHA93598,SNOMED CT:65520001 Primary hyperoxaluria, type I germline 2 240869004 ATCATGGCAGCCGGGGGGCTGCAGATGATCGGGTCCATGAGCAAGGATATGTACCAGGTAG 1057518326 360299 NM_000267.3(NF1):c.4773-1G>A NF1 Feb 02, 2017 MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003;MedGen:CN517202 Neurofibromatosis, type 1;not provided germline 17 31325819 TAATCTTTGTCTTTTTTGTCATTTTCCTTAGGTTCAAAACTGGTCAAATCAATGGTGATTT 111517471 21796 NM_004572.3(PKP2):c.2489+1G>A PKP2 Jul 31, 2017 MedGen:C0349788,Orphanet:ORPHA247,SNOMED CT:253528005,SNOMED CT:281170005;MedGen:C1836906,OMIM:609040;MedGen:CN517202 Arrhythmogenic right ventricular cardiomyopathy;Arrhythmogenic right ventricular cardiomyopathy, type 9;not provided germline 12 32796108 GAAAATTATGGCCATTAGTGCAGGCGATGCGTAAGTCCTTCAGTTCTGCCCGTCAGCTGCC 121908559 20960 NM_000334.4(SCN4A):c.4428G>A (p.Met1476Ile) SCN4A Nov 13, 2007 MedGen:C1868617,OMIM:168300 Paramyotonia congenita of von Eulenburg germline 17 63941854 GGGCATCCGGACGCTGCTGTTCGCCCTCATGATGTCGCTGCCTGCCCTCTTCAACATCGGC 786205243 15552 NM_001142446.1(ANK1):c.1900-17G>A ANK1 Jun 15, 2007 MedGen:CN068423 Spherocytosis, type 1, autosomal recessive germline 8 41708992 GCTCAGCATTCCTGTAACCAGGCTCTGGGCGGCTTCTTCTGTTTCAGAATGGCTACACCCC 587777307 132584 NM_000806.5(GABRA1):c.751G>A (p.Gly251Ser) GABRA1 Apr 08, 2014 MedGen:C3810400,OMIM:615744 Epileptic encephalopathy, early infantile, 19 germline 5 161890945 ACCACTCATTTCCACTTGAAGAGAAAGATTGGCTACTTTGTTATTCAAACATACCTGCCAT 72653792 409466 NM_001171.5(ABCC6):c.2359G>A (p.Val787Ile) ABCC6 Sep 25, 2015 MedGen:CN517202 not provided germline 16 16178854 GATGACCCCCTGGCGGCCCTGGATGCCCACGTTGGCCAGCATGTCTTCAACCAGGTCATTG 114925667 260377 NM_024818.4(UBA5):c.1111G>A (p.Ala371Thr) UBA5 Sep 25, 2017 MedGen:C4310700,OMIM:617132;MedGen:CN517202 Epileptic encephalopathy, early infantile, 44;not provided germline 3 132675903 GTTCCAGACTTACCTGAAGGAATTACAGTGGCATACACAATTCCAAAAAAGGTACTTCAAA 886037858 247614 NM_138459.4(NUS1):c.869G>A (p.Arg290His) NUS1 Jan 22, 2018 MedGen:C4310727,OMIM:617082 CONGENITAL DISORDER OF GLYCOSYLATION, TYPE Iaa germline 6 117707002 CCCTTCGTCAATATGCAGCCTGTGAACAGCGTCTGGGAAAGTAGTGGTCATTGGTTGCATA 879255265 227488 NM_000523.3(HOXD13):c.917G>A (p.Arg306Gln) HOXD13 Aug 12, 2016 MedGen:C2699746,OMIM:186000,Orphanet:ORPHA93403 Synpolydactyly 1 germline 2 176094615 CCATTAACAAATTCATTAACAAGGACAAGCGGCGGCGTATCTCGGCTGCTACGAACCTATC 371898076 52045 NM_000257.3(MYH7):c.1988G>A (p.Arg663His) MYH7 Oct 09, 2017 MedGen:CN230736;MedGen:C1834481,OMIM:613426;MedGen:C3495498,OMIM:192600;MedGen:C3495498,OMIM:192600;Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569;MedGen:CN074249,OMIM:160500,Orphanet:ORPHA59135;Gene:619511,MedGen:C1850709,OMIM:255160;MedGen:C1842160,OMIM:608358,SNOMED CT:699267007;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;Gene:8090,MedGen:CN074265,OMIM:181430,Orphanet:ORPHA437572;MedGen:CN517202 Cardiovascular phenotype;Dilated cardiomyopathy 1S;Familial hypertrophic cardiomyopathy 1;Familial hypertrophic cardiomyopathy 1;Hypertrophic cardiomyopathy;Myopathy, distal, 1;Myopathy, myosin storage, autosomal recessive;Myosin storage myopathy;Primary familial hypertrophic cardiomyopathy;Scapuloperoneal myopathy, MYH7-related;not provided germline;maternal 14 23426833 AAAATCTGAACAAGCTGATGACCAACTTGCGCTCCACCCATCCCCACTTTGTACGTTGTAT 112602953 197398 NM_001613.2(ACTA2):c.353G>A (p.Arg118Gln) ACTA2 Oct 27, 2017 MedGen:C2673186,OMIM:611788;MedGen:CN517202 Aortic aneurysm, familial thoracic 6;not provided germline 10 88943813 CGGAGGCACCCCTGAACCCCAAGGCCAACCGGGAGAAAATGACTCAAGTAAGTATGCTACC 755649235 440666 NM_000092.4(COL4A4):c.1118G>A (p.Gly373Glu) COL4A4 Sep 28, 2015 MedGen:CN517202 not provided germline 2 227098780 TATCTTTGGCAGGCCCACCAGGGGACCCAGGGTTCCCTGGCCGCTATGGAGAAACAGGGGA 1057519632 362622 NM_003718.4(CDK13):c.2149G>A (p.Gly717Arg) CDK13 Feb 02, 2018 MedGen:CN240690,OMIM:617360;MedGen:CN517202 Congenital heart defects, dysmorphic facial features, and intellectual developmental disorder;not provided germline 7 39999467 ATCATCGGAATTATTGGAGAAGGTACTTACGGACAAGTTTACAAAGCCAGGGATAAAGACA 587779680 107185 NM_000090.3(COL3A1):c.2186G>A (p.Gly729Glu) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188999534 CTGGTACTCCTGGTCTGCAAGGAATGCCTGGAGAAAGAGGAGGTCTTGGAAGTCCTGGTCC 587779578 450325 NM_000090.3(COL3A1):c.3500G>A (p.Gly1167Asp) COL3A1 May 02, 2017 MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189008117 CAGGTCCCATTGGACCACCAGGGCCTCGAGGTAACAGAGGTGAAAGAGGATCTGAGGTAAG 137853185 15582 NM_001145308.4(LRTOMT):c.242G>A (p.Arg81Gln) LRTOMT Nov 01, 2008 MedGen:C1969621,OMIM:611451 Deafness, autosomal recessive 63 germline 11 72106094 ACTGCCTGTCAGGGCTGCGGATCGAGGAGCGGGCCTTCAGCTACGTGCTCACCCATGCCCT 80356962 70247 NM_007294.3(BRCA1):c.5444G>A (p.Trp1815Ter) BRCA1 Nov 01, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;Human Phenotype Ontology:HP:0100013,MeSH:D001943,MedGen:C1458155,Orphanet:ORPHA180250,SNOMED CT:126926005;MedGen:CN517202 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;Neoplasm of the breast;not provided germline;unknown 17 43047666 ACCCAATTGTGGTTGTGCAGCCAGATGCCTGGACAGAGGACAATGGCTTCCATGGTAAGGT 137929307 171217 NM_000527.4(LDLR):c.1775G>A (p.Gly592Glu) LDLR May 15, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000;MedGen:CN118841;MedGen:C0020443;MedGen:CN517202 Familial hypercholesterolemia;Familial hypercholesterolemias;Hypercholesterolaemia;not provided germline;inherited;not applicable 19 11116928 TTCACTCCATCTCAAGCATCGATGTCAACGGGGGCAACCGGAAGACCATCTTGGAGGATGA 587779652 107137 NM_000090.3(COL3A1):c.951+1G>A (p.Gly300_Ala317del) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188991723 CGAGGACGGCCAGGACTTCCTGGGGCTGCAGTGAGTATAGCTGCTAACATCACACAATTAC 137853227 30943 NM_002070.3(GNAI2):c.536G>A (p.Arg179His) GNAI2 Aug 26, 2014 MedGen:C4016392;MedGen:C1370419;MedGen:C2750844 Adrenocortical tumor, somatic;Granulosa cell tumor of the ovary;Thecoma, somatic somatic 3 50256263 TCCCCACACAGCAAGATGTGCTACGGACCCGCGTAAAGACCACGGGGATCGTGGAGACACA 796065049 204356 NM_057179.2(TWIST2):c.223G>A (p.Glu75Lys) TWIST2 Jul 02, 2015 MedGen:C1860224,OMIM:200110,Orphanet:ORPHA920 Ablepharon macrostomia syndrome germline 2 238848438 CAGAGCCAGCGCATCCTGGCCAACGTGCGCGAGCGCCAGCGCACCCAGTCGCTCAACGAGG 773658037 246066 NM_000527.4(LDLR):c.1247G>A (p.Arg416Gln) LDLR Dec 13, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000;MedGen:CN517202 Familial hypercholesterolemia;not provided germline 19 11113338 GGCACGAGGTCAGGAAGATGACGCTGGACCGGAGCGAGTACACCAGCCTCATCCCCAACCT 587777346 132647 NM_005861.3(STUB1):c.235G>A (p.Ala79Thr) STUB1 Apr 17, 2014 MedGen:C4014261,OMIM:615768,Orphanet:ORPHA412057 Spinocerebellar ataxia, autosomal recessive 16 germline 16 681227 TGCTACCTGAAGATGCAGCAGCACGAGCAGGCCCTGGCCGACTGCCGGCGCGCCCTGGAGC 137852308 25518 NM_000032.4(ALAS2):c.475G>A (p.Asp159Asn) ALAS2 Jun 01, 2003 MedGen:C0221018,OMIM:300751,Orphanet:ORPHA98362,SNOMED CT:62677000 Hereditary sideroblastic anemia germline X 55021215 TTCAGGGACAAGATCATGGAGAAGAAACAGGATCACACCTACCGTGTGTTCAAGACTGTGA 199473101 78535 NM_198056.2(SCN5A):c.1127G>A (p.Arg376His) SCN5A May 09, 2017 MedGen:C1142166,Orphanet:ORPHA130,SNOMED CT:418818005;MedGen:CN517202 Brugada syndrome;not provided germline 3 38606682 TCCGCCTGATGACGCAGGACTGCTGGGAGCGCCTCTATCAGCAGGTGTGTGTGTGCCCACA 202198133 165952 NM_003002.3(SDHD):c.205G>A (p.Glu69Lys) SDHD Mar 06, 2017 MedGen:C1855008,OMIM:252011,Orphanet:ORPHA3208;MedGen:CN517202 Mitochondrial complex II deficiency;not provided germline 11 112088902 TCCAAGGCTGCATCTCTCCACTGGACTAGCGAGAGGGTTGTCAGTGTTTTGCTCCTGGGTC 121913633 29138 NM_000257.3(MYH7):c.767G>A (p.Gly256Glu) MYH7 May 25, 2017 MedGen:C3495498,OMIM:192600;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Familial hypertrophic cardiomyopathy 1;Primary familial hypertrophic cardiomyopathy;not provided germline 14 23431447 AATTCATTCGAATTCATTTTGGGGCAACAGGAAAGTTGGCATCTGCAGACATAGAGACCTG 587779563 107019 NM_000090.3(COL3A1):c.3193G>A (p.Gly1065Arg) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189006444 GTCGGTCCAGCTGGAAAGAGTGGTGACAGAGGAGAAAGTGTGAGTTCCCAAAAGCAGCATC 876661350 236780 NM_000218.2(KCNQ1):c.528G>A (p.Trp176Ter) KCNQ1 Dec 07, 2011 MedGen:CN517202 not provided germline 11 2570678 CTTCGGGACGGAGTACGTGGTCCGCCTCTGGTCCGCCGGCTGCCGCAGCAAGTACGTGGGC 397514037 360341 NM_002474.2(MYH11):c.4578+1G>A MYH11 Feb 06, 2017 MedGen:C1851504,OMIM:132900;MedGen:CN517202 Aortic aneurysm, familial thoracic 4;not provided germline 16 15721421 GTCAGCTCCAAGGATGACGTGGGCAAGAACGTAAGTGGCTCTGGGTGGTTTTTCTCGTCCA 121912902 32281 NM_000089.3(COL1A2):c.2593G>A (p.Gly865Ser) COL1A2 Sep 25, 1989 MedGen:C0268360,OMIM:166210,SNOMED CT:86470003 Osteogenesis imperfecta, recessive perinatal lethal germline 7 94424363 TAGGGACCTCCTGGCACTCCAGGTCCTCAGGGTCTTCTTGGTGCTCCTGGTATTCTGGGTC 782290433 260329 NM_000377.2(WAS):c.223G>A (p.Val75Met) WAS May 05, 2017 MedGen:C1839163,OMIM:313900,Orphanet:ORPHA852;MedGen:CN517202 Thrombocytopenia, X-linked;not provided germline X 48684373 ACCAAGGAGCATTGTGGGGCTGTGTGCTTCGTGAAGGATAACCCCCAGAAGTCCTACTTCA 387906885 39370 NM_016219.4(MAN1B1):c.1189G>A (p.Glu397Lys) MAN1B1 Sep 30, 2016 MedGen:C3280127,OMIM:614202;MedGen:CN517202 Mental retardation, autosomal recessive 15;not provided germline 9 137101607 CCACGGTGGACCTCCGACAGCACTGTGGCCGAGGTGACCAGCATTCAGCTGGAGTTCCGGG 386834260 28160 NM_183059.2(RD3):c.296+1G>A RD3 May 02, 2013 MedGen:C1857743,OMIM:610612 Leber congenital amaurosis 12 germline 1 211481119 CCCATCCTATTGTGGGCCTGCTATCCTCAGGTGAGCACTGGGATGGGGACCCTTGCTGGGC 397515757 51454 NM_000138.4(FBN1):c.1468+5G>A FBN1 Oct 05, 2017 MedGen:C0265287,OMIM:102370,Orphanet:ORPHA969,SNOMED CT:254090007;MedGen:C1851286,OMIM:129600;MedGen:C3280054,OMIM:614185;MedGen:C1858556,OMIM:604308,Orphanet:ORPHA99715;MedGen:C4310796,OMIM:616914,Orphanet:ORPHA300382;MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:C1861456,OMIM:184900,Orphanet:ORPHA2833;MedGen:CN118826,Orphanet:ORPHA91387;MedGen:C1869115,OMIM:608328,Orphanet:ORPHA2084;MedGen:CN517202 Acromicric dysplasia;Ectopia lentis, isolated, autosomal dominant;Geleophysic dysplasia 2;MASS syndrome;Marfan lipodystrophy syndrome;Marfan syndrome;Marfan syndrome;Stiff skin syndrome;Thoracic aortic aneurysm and aortic dissection;Weill-Marchesani syndrome 2;not provided germline;unknown 15 48515382 GCTGGACCTCCGTGGGGAGTGTATTGGTACGTGATCCATCCTAGGTTGGCACCAAGGGTCT 864321715 217279 NM_006086.3(TUBB3):c.211G>A (p.Gly71Arg) TUBB3 Mar 02, 2016 MedGen:C2748801,OMIM:600638;MedGen:CN517202 Fibrosis of extraocular muscles, congenital, 3a, with or without extraocular involvement;not provided germline 16 89933512 CCTCGAGCCATTCTGGTGGACCTGGAACCCGGAACCATGGACAGTGTCCGCTCAGGGGCCT 776496862 192617 NM_000282.3(PCCA):c.1788G>A (p.Trp596Ter) PCCA Dec 02, 2014 Human Phenotype Ontology:HP:0003353,MedGen:C0268579,OMIM:606054,Orphanet:ORPHA35 Propionic acidemia germline 13 100425674 TGGGTCGAAACTAAATGTGACCAGCACGTGGAACCTGGCTTCGCCCTTATTGTCTGTCAGC 587783387 168726 NM_018249.5(CDK5RAP2):c.4005-1G>A CDK5RAP2 Apr 01, 2014 MedGen:C1858108,OMIM:604804 Primary autosomal recessive microcephaly 3 germline 9 120419961 GATGATTTATCTTTCAATCTCAATGGTTAAGGATTGAGGAAGACAACTTAACCTACCAACA 121908315 19654 NM_012398.2(PIP5K1C):c.757G>A (p.Asp253Asn) PIP5K1C Sep 01, 2007 MedGen:C1969655,OMIM:611369,Orphanet:ORPHA137783 Lethal congenital contractural syndrome 3 germline 19 3653454 CCCCGCGTGGTCAAGATGCACCTCAAGTTCGACCTCAAGGGCTCCACCTACAAGCGGCGCG 67162110 32314 NM_000089.3(COL1A2):c.1404+1G>A COL1A2 May 01, 2004 MedGen:C1857034,OMIM:225320,Orphanet:ORPHA230851 Ehlers-Danlos syndrome, autosomal recessive, cardiac valvular form germline 7 94412122 ATCGGCCCCGCTGGAAAAGAAGGTCCTGTCGTAAGTATTGCTCATTTTCCATTATATTTTC 398123439 99086 NM_000512.4(GALNS):c.477G>A (p.Trp159Ter) GALNS May 14, 2013 MedGen:C0086651,OMIM:253000,Orphanet:ORPHA309297,SNOMED CT:7259005 Mucopolysaccharidosis, MPS-IV-A germline 16 88837711 CCACCCCCTGAAGCACGGATTTGATGAGTGGTTTGGATCCCCCAACTGCCACTTTGGACCT 398124401 102019 NM_024592.4(SRD5A3):c.57G>A (p.Trp19Ter) SRD5A3 Aug 04, 2017 MedGen:C3150191,OMIM:612379,Orphanet:ORPHA324737;MedGen:CN517202 Congenital disorder of glycosylation type 1Q;not provided germline;inherited 4 55346393 CTCGGCGCTGAACCCGCTGCGCGCGGTGTGGCTCACGCTGACCGCCGCCTTCCTGCTGACC 886041708 264600 NM_000161.2(GCH1):c.159G>A (p.Trp53Ter) GCH1 Apr 18, 2016 MedGen:CN517202 not provided germline 14 54902505 GGCCAAGAGCGCGCAGCCCGCGGACGGCTGGAAGGGCGAGCGGCCCCGCAGCGAGGAGGAT 869025670 364105 NM_023110.2(FGFR1):c.1468G>A (p.Gly490Arg) FGFR1 Nov 21, 2016 MedGen:CN517202 not provided de novo 8 38417954 TTAGGCAAACCCCTGGGAGAGGGCTGCTTTGGGCAGGTGGTGTTGGCAGAGGCTATCGGGC 118192235 34621 NM_172107.3(KCNQ2):c.1742G>A (p.Arg581Gln) KCNQ2 Nov 16, 2016 MedGen:C1852587,OMIM:121200;Human Phenotype Ontology:HP:0200134,MedGen:C0543888;MedGen:CN517202 Benign familial neonatal seizures 1;Epileptic encephalopathy;not provided de novo;germline 20 63413471 ACTCAGCCGGCCACCTGGACATGCTGTCCCGAATTAAGAGCCTGCAGTCCAGGCAAGAGCC 281874663 35731 NM_000495.4(COL4A5):c.1259G>A (p.Gly420Glu) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108591151 ATGAAGGACCACCTGGAATTTCCATTCCTGGACCTCCTGGACTTGACGGACAGCCTGGGGC 137852676 44281 NM_000352.4(ABCC8):c.4198G>A (p.Gly1400Arg) ABCC8 Jun 07, 2014 MedGen:C3888018,Orphanet:ORPHA276525;MedGen:C1833104,OMIM:606176,Orphanet:ORPHA99885;MedGen:C1257959,OMIM:256450,SNOMED CT:360339005 Familial hyperinsulinism;Permanent neonatal diabetes mellitus;Persistent hyperinsulinemic hypoglycemia of infancy germline;unknown 11 17395852 GCCTTCTTCCGCATGGTGGACACGTTCGAAGGTGAGTTGTAAGGCGGGCACCCCACGTGTA 863223311 31746 NM_130803.2(MEN1):c.1365+1G>A MEN1 Aug 01, 2004 MedGen:C1840402,OMIM:145000 Hyperparathyroidism 1 germline 11 64805033 GTGCAGTCCCTAGGCCGTTTTGAGGGACAGGTGAGGGACAGCTGCACAGAGGTCTGGGCAC 45546039 48043 NM_198056.2(SCN5A):c.665G>A (p.Arg222Gln) SCN5A Mar 22, 2017 MedGen:C1142166,Orphanet:ORPHA130,SNOMED CT:418818005;MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MedGen:C1832680,OMIM:601154;EFO:EFO_0000407,Human Phenotype Ontology:HP:0001644,MedGen:C0007193,Orphanet:ORPHA217604,SNOMED CT:195021004;MedGen:CN517202 Brugada syndrome;Congenital long QT syndrome;Dilated cardiomyopathy 1E;Primary dilated cardiomyopathy;not provided germline 3 38613781 TGGGCAATGTCTCAGCCTTACGCACCTTCCGAGTCCTCCGGGCCCTGAAAACTATATCAGT 875989890 228121 NM_000527.4(LDLR):c.224G>A (p.Cys75Tyr) LDLR Mar 25, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11102697 CTGTCACCTGCAAATCCGGGGACTTCAGCTGTGGGGGCCGTGTCAACCGCTGCATTCCTCA 281864970 47621 NM_024312.4(GNPTAB):c.1001G>A (p.Arg334Gln) GNPTAB May 10, 2012 MedGen:C0033788,OMIM:252600,Orphanet:ORPHA423461,SNOMED CT:65764006 Pseudo-Hurler polydystrophy not provided 12 101770518 AAGATAACGAAGAACTGAGGTACTCATTGCGATCTATCGAGAGGCATGCACCATGGGTTCG 119479067 20017 NM_022436.2(ABCG5):c.1256G>A (p.Arg419His) ABCG5 Jan 01, 2001 MedGen:C0342907,OMIM:210250,Orphanet:ORPHA2882,SNOMED CT:238104009 Sitosterolemia germline 2 43823981 GCAATGTGCTAAAGGGTGCTATCCAGGACCGCGTAGGTCTCCTTTACCAGTTTGTGGGCGC 587783660 169281 NM_005682.6(ADGRG1):c.620+1G>A ADGRG1 Feb 08, 2013 MedGen:C1847352,OMIM:606854,Orphanet:ORPHA101070 Polymicrogyria, bilateral frontoparietal germline 16 57653336 AAGGAGGCCCTCGGCTGCCCCCGCCAGCCAGTAAGTTTGGCACCTGGGGCTGTGAGGGGAG 61731956 228099 NM_005693.3(NR1H3):c.1244G>A (p.Arg415Gln) NR1H3 Aug 01, 2015 MedGen:C0026769,Orphanet:ORPHA802 Multiple sclerosis inherited 11 47268596 CACGGATGCTAATGAAACTGGTGAGCCTCCGGACCCTGAGCAGCGTCCACTCAGAGCAAGT 770114459 205050 NM_014362.3(HIBCH):c.1033G>A (p.Gly345Ser) HIBCH Aug 01, 2015 MedGen:C0342738,OMIM:250620,Orphanet:ORPHA88639,SNOMED CT:237958002 Beta-hydroxyisobutyryl-CoA deacylase deficiency germline 2 190208892 TTCTTTCAGAGAGGTCATGACTTTCATGAAGGCGTTAGAGCTGGTAAGTGGCAAATGGGAA 377160857 440090 NM_025132.3(WDR19):c.880G>A (p.Gly294Arg) WDR19 Jun 01, 2017 MedGen:C0265275,Orphanet:ORPHA474,SNOMED CT:75049004 Jeune thoracic dystrophy maternal 4 39205726 TCACAGACTCTTAACAAAGTTGCTACATGTGGAGATAACTGGTAAGTTATTTTCACATATT 1060499796 389222 NM_032119.3(ADGRV1):c.2898G>A (p.Glu966=) ADGRV1 Jun 04, 2016 MedGen:C1854237,OMIM:605472 Usher syndrome, type 2C germline 5 90644869 AAATATCACCATTTACTCCCTTCCAGATGAGGTAAATATTGCATATAACTTTCTGCCTTAC 199469655 106398 NM_003590.4(CUL3):c.1236G>A (p.Leu412=) CUL3 - Gene:7830,MedGen:C1449844,OMIM:145260,Orphanet:ORPHA757,SNOMED CT:15689008 Pseudohypoaldosteronism, type 2 germline 2 224503793 GCTAACAGAACAAGAAGTAGAAACAATATTGGATAAAGCAATGGTCCTTTTTAGGTTTATG 587777082 102932 NM_015662.2(IFT172):c.3228+1G>A IFT172 Feb 10, 2014 MedGen:C4017084 Short-rib thoracic dysplasia 10 without polydactyly germline 2 27457638 GCCAGTGGGCTTTGGGAAGAGGCCTACAGGGTAAGGAGTTCAGGCCACACTGAGGGATACA 121908686 21242 NM_003560.3(PLA2G6):c.2222G>A (p.Arg741Gln) PLA2G6 Feb 01, 2009 MedGen:C2751842,OMIM:612953,Orphanet:ORPHA199351 Parkinson disease 14 germline 22 38112558 CTTCTCACCAGTGCACGGATCCAGACGGGCGGGCTGTGGACCGGGCACGGGCCTGGTGCGA 121913069 31568 NM_000129.3(F13A1):c.1687G>A (p.Gly563Arg) F13A1 Apr 15, 1998 Human Phenotype Ontology:HP:0040233,MedGen:C2750514,OMIM:613225 Factor xiii, a subunit, deficiency of germline 6 6174640 TATCTCTCAGCCAACATCACCTTCTACACCGGGGTCCCGAAGGCAGAATTCAAGAAGGAGA 63750446 426830 NM_001171.5(ABCC6):c.3895G>A (p.Gly1299Ser) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16155019 CCTCCCAACCCCGGGCAGGTGGGCATCGTTGGCAGGACCGGGGCAGGGAAGTCCTCCCTGG 377767323 36139 NM_005359.5(SMAD4):c.302G>A (p.Trp101Ter) SMAD4 Dec 04, 2012 MedGen:C1832942,OMIM:175050 Juvenile polyposis/hereditary hemorrhagic telangiectasia syndrome not provided 18 51048738 CTCATGTGATCTATGCCCGTCTCTGGAGGTGGCCTGATCTTCACAAAAATGAACTAAAACA 9333649 78144 NM_000238.3(KCNH2):c.1714G>A (p.Gly572Ser) KCNH2 Dec 16, 2016 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MedGen:CN517202 Congenital long QT syndrome;not provided germline 7 150951679 CACTGGCTAGCCTGCATCTGGTACGCCATCGGCAACATGGAGCAGCCACACATGGACTCAC 779939886 216035 NM_172250.2(MMAA):c.733+1G>A MMAA Jan 07, 2016 MedGen:C1855109,OMIM:251100,Orphanet:ORPHA79310 Methylmalonic aciduria cblA type germline 4 145646157 GATATGACATAATTCTTATTGAAACCGTTGGTGAGTGTGATATTCTATTTCATAACAATGT 312262798 24268 NM_024408.3(NOTCH2):c.5930-1G>A NOTCH2 Feb 28, 2013 MedGen:C1857761,OMIM:610205,Orphanet:ORPHA261629 Alagille syndrome 2 germline 1 119917763 GTCTGTTTATAAAAATGTTTCTCCCCTGCAGGAAAATCTGCTCTTCACTGGGCAGCTGCTG 200133991 181460 NM_001031726.3(C19orf12):c.157G>A (p.Gly53Arg) C19orf12 Mar 07, 2017 MedGen:CN228270;MedGen:C0037773,Orphanet:ORPHA685,SNOMED CT:39912006;Human Phenotype Ontology:HP:0002180,MedGen:C0027746;MedGen:C3280371,OMIM:614298,Orphanet:ORPHA289560 Brain iron accummulation;Hereditary spastic paraplegia;Neurodegeneration;Neurodegeneration with brain iron accumulation 4 germline;inherited 19 29708290 GCCCTGGTCACAGGGGCCATGGCCTTCGTCGGGGGTTTGGTGGGCGGCCCACCGGGACTCG -1 429900 NM_000135.3(FANCA):c.2151+1G>A FANCA Feb 03, 2017 MedGen:C3469521,OMIM:227650 Fanconi anemia, complementation group A germline 16 89771677 ACGCCGAGACTGGAGCCACGGGAACACATGGTAGGTGTAGGGGCTCAGAACAAAGCAGGGG 886039411 260286 NM_000425.4(L1CAM):c.2547+1G>A L1CAM Sep 11, 2017 MedGen:CN517202 not provided germline X 153865703 CAGGTCAAGGGCCACCTCCGCGGATACAATGTAAGGGTTGAAGGCATGGGGGCCCAGGAGG 121909109 22544 NM_002653.4(PITX1):c.388G>A (p.Glu130Lys) PITX1 Nov 01, 2008 MedGen:C0009081,OMIM:119800 Talipes equinovarus germline 5 135031290 GAGGAGATCGCCGTGTGGACCAACCTCACCGAGCCGCGCGTGCGGGTGAGCAAGGGGTGCG 587777220 125785 NM_004589.3(SCO1):c.394G>A (p.Gly132Ser) SCO1 May 01, 2009 MedGen:C0268237,OMIM:220110,Orphanet:ORPHA254905,SNOMED CT:67434000 Hepatic failure, early-onset, and neurologic disorder due to cytochrome C oxidase deficiency germline 17 10692932 GAGTTAGAGAAGGAACGGCAGCGACACATCGGCAAGCCTTTACTTGGGGGACCGTTTTCCC -1 414708 NM_001040436.2(YARS2):c.1106G>A (p.Cys369Tyr) YARS2 Apr 07, 2017 MedGen:C0751651,Orphanet:ORPHA68380 Mitochondrial diseases germline 12 32750105 GATGTAGCTCTTAAAATGTGTTTTTCAGGTGTACACAAGCCCTTTATCACAGTAGCATAGA 281875334 38553 NM_001101.4(ACTB):c.587G>A (p.Arg196His) ACTB Apr 03, 2017 MedGen:C1855722,OMIM:243310,OMIM:608578,Orphanet:ORPHA2995;MedGen:CN517202 Baraitser-Winter syndrome 1;not provided germline 7 5528496 CTGACTACCTCATGAAGATCCTCACCGAGCGCGGCTACAGCTTCACCACCACGGCCGAGCG 794727854 425576 NM_001457.3(FLNB):c.1082G>A (p.Gly361Asp) FLNB Jun 14, 2017 MedGen:CN517202 not provided germline 3 58097912 AGGGAGATGCCAGTAAAGTCACTGCAAAAGGTCCAGGGTTGGAAGCTGTAGGGAACATCGC 778345761 235175 NM_024675.3(PALB2):c.3114G>A (p.Trp1038Ter) PALB2 Dec 29, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 16 23614091 TGATCAGCTTATTTATTTTTGTTATCTAAGGAATTTAAAAACTGGTCAACTCCTGAAAAAG 879956688 427072 NM_001171.5(ABCC6):c.373G>A (p.Glu125Lys) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16219655 CAGAGCTTCGCAGTGTTCCTGATTCACACCGAGAGGAAAAAGGGAGTCCAGTCATCTGGAG 1057520544 370537 NM_003165.3(STXBP1):c.1689G>A (p.Trp563Ter) STXBP1 Mar 10, 2015 MedGen:CN517202 not provided germline 9 127682547 CTACGAGGTGACCCAGGCCAACGGAAAGTGGGAGGTGCTGATAGGTGAGTGGCCGTGCTTC 397515429 48469 NM_018344.5(SLC29A3):c.1157G>A (p.Arg386Gln) SLC29A3 Dec 21, 2012 MedGen:C1864445,OMIM:602782,Orphanet:ORPHA168569 Histiocytosis-lymphadenopathy plus syndrome germline 10 71362337 GCAAGGCGCTCCCAGGGTTCGTGCTCCTCCGGACCTGCCTCATCCCCCTCTTCGTGCTCTG 28933678 25325 NM_000132.3(F8):c.5593G>A (p.Asp1865Asn) F8 Jan 01, 1995 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154904518 AGGATTGATGTCTTCCCTCCCTAGGAAAAAGATGTGCACTCAGGCCTGATTGGACCCCTTC 28939668 22663 NM_000214.2(JAG1):c.821G>A (p.Gly274Asp) JAG1 May 11, 2017 MedGen:C1956125,OMIM:118450;Human Phenotype Ontology:HP:0001636,MedGen:C0039685,OMIM:187500,Orphanet:ORPHA3303,SNOMED CT:86299006 Alagille syndrome 1;Tetralogy of Fallot germline 20 10652533 AGTGCATCCCACACCCGGGATGCGTCCACGGCATCTGTAATGAGCCCTGGCAGTGCCTCTG 587777351 132655 NM_025132.3(WDR19):c.3703G>A (p.Glu1235Lys) WDR19 Aug 01, 2013 MedGen:C3280612,OMIM:614377 Nephronophthisis 13 germline 4 39274945 AAAATAGATGCCAAATACAAAAAGAAGATCGAGGGAATGGTCAGGTAGGCAGAGATGGCTA 368820286 264223 NM_001182.4(ALDH7A1):c.1489+5G>A ALDH7A1 Jul 05, 2017 MedGen:CN517202 not provided germline 5 126549924 TGGGGCTGAGATTGGAGGTGCCTTTGGTACGTAGAGAATCATTTCTCCTTTTCCATGTTGG 587779629 107175 NM_000090.3(COL3A1):c.728G>A (p.Gly243Glu) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188990133 CAGGTAGACCCGGACGACCTGGAGAGCGAGGATTGCCTGGACCTCCAGTGAGTCTTCAGCA 772929976 227438 NM_031942.4(CDCA7):c.1148G>A (p.Arg383His) CDCA7 Apr 21, 2016 MedGen:C4310799,OMIM:616910 Immunodeficiency-centromeric instability-facial anomalies syndrome 3 germline 2 173366395 GCCAGTTCTGTGGCCCCTGCCTTCGAAACCGTTATGGTGAAGAGGTCAGGGATGCTCTGCT 1057520666 364854 NM_014053.3(FLVCR1):c.1093-1G>A FLVCR1 Apr 24, 2015 MedGen:CN517202 not provided germline 1 212885292 TTGATCAACTTCTTACGCAAATTTTTTTCAGGGAGAAGAAGTCAATGCTGGAAGGATTGGG 104886363 35900 NM_000495.4(COL4A5):c.2732G>A (p.Gly911Glu) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108621857 TGGGACCTCCAGGCCCACCAGGACCTTTGGGAATTCCTGGCAGGAGTGGTGTACCTGGTCT 199422160 34433 NM_018136.4(ASPM):c.3741+1G>A ASPM Sep 01, 2009 MedGen:C1837501,OMIM:608716 Primary autosomal recessive microcephaly 5 not provided 1 197122158 GATATGTCAAATACAATTCCAGATGAAAAGGTAAGTAAAAGAAGAGTTTCTAATTATTAAT 769561386 427656 NM_170707.3(LMNA):c.1786G>A (p.Asp596Asn) LMNA Feb 08, 2013 MeSH:D009136,MedGen:C0026850,Orphanet:ORPHA98473 Muscular dystrophy germline 1 156138575 GTGCTGTGCGGGACCTGCGGGCAGCCTGCCGACAAGGCATCTGCCAGCGGCTCAGGAGCCC 121965047 15201 NM_000274.3(OAT):c.994G>A (p.Val332Met) OAT Nov 01, 1993 MedGen:CN068398;Human Phenotype Ontology:HP:0012026,MedGen:C0599035,OMIM:258870,SNOMED CT:276426004 Gyrate atrophy of choroid and retina with pyridoxine-responsive ornithinemia;Ornithine aminotransferase deficiency germline 10 124401746 ACATACGGTGGCAATCCACTAGGCTGCCGAGTGGCCATCGCAGCCCTTGAGGTAAAGACTG 387906589 38549 NM_001105.4(ACVR1):c.983G>A (p.Gly328Glu) ACVR1 May 31, 2016 Human Phenotype Ontology:HP:0010796,MedGen:C0677865;MedGen:C0016037,OMIM:135100,Orphanet:ORPHA337,SNOMED CT:82725007 Brainstem glioma;Progressive myositis ossificans germline;somatic 2 157766004 ATTTGCACATAGAGATATTTGGGACCCAAGGGAAACCAGCCATTGCCCATCGAGATTTAAA 121918655 27844 NM_004959.4(NR5A1):c.877G>A (p.Asp293Asn) NR5A1 Mar 19, 2009 MedGen:C2751824,OMIM:612965,Orphanet:ORPHA98085;MedGen:C2751825,OMIM:612964 46,XY sex reversal, type 3;Premature ovarian failure 7 germline 9 124493143 CCCCCGCGTGCCTCTTCCTTCCAGGTGGCCGACCAGATGACGCTGCTGCAGAACTGCTGGA 587779630 107105 NM_000090.3(COL3A1):c.2293G>A (p.Gly765Ser) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189001406 AAATATTTTTATTTCCTCTAGGGTCCTACTGGTCCTATTGGTCCTCCTGGCCCAGCTGGCC 104894252 18153 NM_000218.2(KCNQ1):c.565G>A (p.Gly189Arg) KCNQ1 May 02, 2017 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MedGen:C0035828,OMIM:192500,Orphanet:ORPHA101016,SNOMED CT:20852007;MedGen:CN517202 Congenital long QT syndrome;Long QT syndrome 1;not provided germline 11 2570715 GGCTGCCGCAGCAAGTACGTGGGCCTCTGGGGGCGGCTGCGCTTTGCCCGGAAGCCCATTT 794727152 191718 NM_021007.2(SCN2A):c.2558G>A (p.Arg853Gln) SCN2A May 18, 2017 MedGen:C1843140,OMIM:607745,Orphanet:ORPHA140927;MedGen:C3150987,OMIM:613721;MedGen:C3150987,OMIM:613721;MedGen:CN517202 Benign familial neonatal-infantile seizures;Early infantile epileptic encephalopathy 11;Early infantile epileptic encephalopathy 11;not provided de novo;germline;unknown 2 165342465 TGGAAGGATTGTCAGTTCTCCGATCATTCCGGCTGGTAAATTAACTGGGAGTGTTCATAAA 879253804 214883 NM_000282.3(PCCA):c.105+1G>A PCCA Jan 01, 2013 Human Phenotype Ontology:HP:0003353,MedGen:C0268579,OMIM:606054,Orphanet:ORPHA35 Propionic acidemia germline 13 100089226 ATGCTGAGCGCGGCGCTGCGGACCCTGAAGGTGAGGAGCAACGGGGCCTCGCGGGTCCGGG 876660771 235395 NM_004360.4(CDH1):c.1137+1G>A CDH1 Apr 24, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1708349,OMIM:137215,Orphanet:ORPHA26106;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Hereditary diffuse gastric cancer;not provided germline 16 68812264 GATAATCCTCCGATCTTCAATCCCACCACGGTAATTCTATAACTCCTTAGAGGGTTTCCAA 876657694 229362 NM_032119.3(ADGRV1):c.14885G>A (p.Trp4962Ter) ADGRV1 Jul 20, 2015 MedGen:C1854237,OMIM:605472 Usher syndrome, type 2C germline 5 90807650 ACGGTGAACAAAGGAAAGGAGTTTTCCTGTGGACGTTTCCTAGCCCTGGTTGGCCAGAGGC 751604696 425943 NM_001360.2(DHCR7):c.1337G>A (p.Arg446Gln) DHCR7 May 31, 2017 MedGen:C0175694,OMIM:270400,Orphanet:ORPHA818,SNOMED CT:43929004;MedGen:CN517202 Smith-Lemli-Opitz syndrome;not provided germline;unknown 11 71435466 TGGCCATCCTGCTGACCCACCGCTGCCTCCGGGACGAGCACCGCTGCGCCAGCAAGTACGG 104894644 19824 NM_025237.2(SOST):c.372G>A (p.Trp124Ter) SOST Mar 01, 2001 MedGen:CN032489,OMIM:269500 Sclerosteosis 1 germline 17 43755612 GCTGCCCAACGCCATCGGCCGCGGCAAGTGGTGGCGACCTAGTGGGCCCGACTTCCGCTGC 121907957 18939 NM_000520.5(HEXA):c.509G>A (p.Arg170Gln) HEXA Sep 21, 2016 MedGen:C0039373,OMIM:272800,Orphanet:ORPHA845,SNOMED CT:111385000;MedGen:CN517202 Tay-Sachs disease;not provided germline 15 72353129 AGATTGAGGACTTTCCCCGCTTTCCTCACCGGGGCTTGCTGTTGGATACATCTCGCCATTA 368489876 39056 NM_002052.4(GATA4):c.1075G>A (p.Glu359Lys) GATA4 Nov 01, 2008 MedGen:C3280777,OMIM:614429 Ventricular septal defect 1 germline 8 11757012 AACTCCAGCAACGCCACCACCAGCAGCAGCGAGGAGATGCGTCCCATCAAGACGGAGCCTG 199476201 47857 NM_207352.3(CYP4V2):c.1169G>A (p.Arg390His) CYP4V2 Apr 12, 2012 MedGen:C1859486,OMIM:210370,Orphanet:ORPHA41751 Bietti crystalline corneoretinal dystrophy not provided 4 186208943 ATCTGGAATGTGTTATTAAGGAGACCCTTCGCCTTTTTCCTTCTGTTCCTTTATTTGCCCG 786204023 185774 NM_005957.4(MTHFR):c.1088G>A (p.Arg363His) MTHFR - MedGen:C1856058,OMIM:236250 Homocysteinemia due to MTHFR deficiency germline 1 11794807 CCCACCCCAAGCGCCGAGAGGAAGATGTACGTCCCATCTTCTGGGCCTCCAGACCAAAGAG 104886235 35977 NM_000495.4(COL4A5):c.3481G>A (p.Gly1161Arg) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108666522 TTAGGTGGTGGAGGTCATCCTGGGCAACCAGGGCCTCCAGGCGAAAAAGGCAAACCCGGTC 587779576 107033 NM_000090.3(COL3A1):c.2987G>A (p.Gly996Glu) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189005405 ACGGTCTCAGTGGAGAACGTGGTCCCCCTGGACCCCAGGGTCTTCCTGGTCTGGCTGGTAC 1064793932 410599 NM_000540.2(RYR1):c.14512-1G>A RYR1 Jul 17, 2015 MedGen:CN517202 not provided germline 19 38580369 CGGAGCTGACCTGGCCCCATCCTGCCCCCAGCTGGTGATGACCGTGGGCCTTCTGGCGGTG 786204862 187359 NM_000314.6(PTEN):c.493-1G>A PTEN Feb 04, 2016 MedGen:CN517202 not provided germline 10 87952117 ATTTGGCTTCTCTTTTTTTTCTGTCCACCAGGGAGTAACTATTCCCAGTCAGAGGCGCTAT 398123172 415590 NM_000152.4(GAA):c.2105G>A (p.Arg702His) GAA Aug 21, 2017 MedGen:C0017921,OMIM:232300,Orphanet:ORPHA365,SNOMED CT:124462004,SNOMED CT:237967002;MedGen:CN517202 Glycogen storage disease, type II;not provided germline 17 80113282 AGCAGGCCATGAGGAAGGCCCTCACCCTGCGCTACGCACTCCTCCCCCACCTCTACACACT -1 485949 NM_001844.4(COL2A1):c.2582G>A (p.Gly861Asp) COL2A1 Mar 15, 2016 Human Phenotype Ontology:HP:0002652,MedGen:C0410528,SNOMED CT:105986008 Skeletal dysplasia germline 12 47980597 AAGGAGAGGCCGGCCAGAAAGGCGATGCTGGTGCCCCTGGTCCTCAGGGCCCCTCTGGAGC 397515347 18209 NM_000187.3(HGD):c.16-1G>A HGD Dec 21, 2015 MedGen:C0002066,OMIM:203500,Orphanet:ORPHA56 Alkaptonuria germline;unknown 3 120675864 ATGGTGGCATTTGTGTCTTTGTCACCTACAGTACATTTCTGGATTTGGGAATGAGTGTTCT 180177198 200467 NM_000030.2(AGXT):c.323G>A (p.Trp108Ter) AGXT Nov 27, 2014 MedGen:C0268164,OMIM:259900,Orphanet:ORPHA93598,SNOMED CT:65520001 Primary hyperoxaluria, type I germline 2 240869327 ACTCCTTCCTGGTTGGGGCCAATGGCATTTGGGGGCAGCGAGCCGTGGACATCGGGGAGCG 137852612 24500 NM_000211.4(ITGB2):c.505G>A (p.Gly169Arg) ITGB2 Jul 01, 1990 MedGen:C0272187 Leukocyte adhesion deficiency germline 21 44901728 CCCAGCCCCTCCATGTGCCCTGCAGGCTTCGGGTCCTTCGTGGACAAGACCGTGCTGCCGT 121908530 20689 NM_000030.2(AGXT):c.466G>A (p.Gly156Arg) AGXT Jan 14, 2016 MedGen:C0268164,OMIM:259900,Orphanet:ORPHA93598,SNOMED CT:65520001 Primary hyperoxaluria, type I germline;unknown 2 240871391 CACAAGCCAGTGCTGCTGTTCTTAACCCACGGGGAGTCGTCCACCGGCGTGCTGCAGCCCC 863225236 214293 NM_153704.5(TMEM67):c.2801G>A (p.Gly934Glu) TMEM67 Feb 23, 2015 MedGen:C1853153,OMIM:610688 Joubert syndrome 6 unknown 8 93815341 GTTATTCTTTCAGCAGTGTCCTGTATTATGGAAATGAAGCTACTCTTCTTATTTTTGATCT 199473606 196892 NM_198056.2(SCN5A):c.4035G>A (p.Trp1345Ter) SCN5A Oct 15, 2012 MedGen:CN517202 not provided germline 3 38560357 GAACGTCCTCCTCGTCTGCCTCATCTTCTGGCTCATCTTCAGCATCATGGGCGTGAACCTC 1057519437 362152 NM_001005463.2(EBF3):c.512G>A (p.Gly171Asp) EBF3 - Human Phenotype Ontology:HP:0002136,MedGen:C0856863;Human Phenotype Ontology:HP:0002376,MedGen:C1855009;Human Phenotype Ontology:HP:0001290,MedGen:C1858120;Human Phenotype Ontology:HP:0000011,MedGen:C0005697;Human Phenotype Ontology:HP:0000110,MedGen:C3536714,Orphanet:ORPHA93108 Broad-based gait;Developmental regression;Generalized hypotonia;Neurogenic bladder;Renal dysplasia de novo 10 129957300 ACAGCCGGTGCTGTGACAAGAAAAGTTGTGGCAATAGAAACGAAACGCCCTCAGACCCTGT 148690740 175926 NM_144672.3(OTOA):c.1880+1G>A OTOA Oct 30, 2013 MedGen:CN043648,Orphanet:ORPHA87884 Nonsyndromic hearing loss and deafness germline 16 21722979 TATGCCACCTTTCCTCTTGGCTGCACTCCCGTAAGTGAACATCAGCCCCCACCTTCTGGCT 767070218 414278 NM_001204.6(BMPR2):c.1276+1G>A BMPR2 - MedGen:C0152171,OMIM:178600,SNOMED CT:26174007 Primary pulmonary hypertension germline 2 202532733 TATTTATGAGATGTACAGACCTCTTCCCAGGTAAAAACTACTGTCAAAAGTTGATATTTTT 779650200 360009 NM_000256.3(MYBPC3):c.3257G>A (p.Trp1086Ter) MYBPC3 Nov 01, 2016 MedGen:CN517202 not provided germline 11 47333267 ACGCCTGGGGTCTTAATGTGGCTCTGGAGTGGAAGCCACCCCAGGATGTCGGCAACACGGA 61749438 22922 NM_000350.2(ABCA4):c.2565G>A (p.Trp855Ter) ABCA4 Jan 01, 1998 MeSH:C535804,MedGen:C1855465,OMIM:248200;MedGen:CN517202 Stargardt disease 1;not provided germline 1 94055133 TGATGCTGCTGTCTATGGCTTACTCGCTTGGTACCTTGATCAGGTGTTTCCAGGTAAGCAT 886039699 259839 NM_020732.3(ARID1B):c.3550+1G>A ARID1B Jul 28, 2016 MedGen:CN517202 not provided germline 6 157184436 AGCAGCCCAAGCTCCAGCCGCCATCTCCTGGTAAGTGGCGGCGCTGCAGTCACTGGCCCAG 398124128 100859 NM_004369.3(COL6A3):c.6282+1G>A COL6A3 Aug 11, 2016 MedGen:CN029274,OMIM:158810;MedGen:CN033863,OMIM:254090;MedGen:CN517202 Bethlem myopathy 1;Ullrich congenital muscular dystrophy 1;not provided germline 2 237360087 CAGGGCTGCCCGGGCCAGAGAGGAGTAAAGGTGAGGCGTGGGTGATGGGGTTGCTAGCGTG 28940580 17589 NM_000243.2(MEFV):c.2040G>A (p.Met680Ile) MEFV Jul 13, 2017 MedGen:C0031069,OMIM:249100,Orphanet:ORPHA342,SNOMED CT:12579009;MedGen:CN517202;MedGen:CN169374 Familial Mediterranean fever;not provided;not specified germline 16 3243447 CAAGACATCCATAAGCAGGAAAGGGAACATGACTCTGTCGCCAGAGAATGGCTACTGGGTG 148969222 51251 NM_000057.3(BLM):c.3558+1G>A BLM Mar 28, 2013 MedGen:C0005859,OMIM:210900,Orphanet:ORPHA125,SNOMED CT:4434006 Bloom syndrome not provided 15 90803721 GCCCAAACTGTACTAAATGGCAATTTAAAGGTATAGTATTTTTCATGTTTATTTTATTATC 273585647 49403 NM_000084.4(CLCN5):c.1537G>A (p.Gly513Arg) CLCN5 Aug 09, 2012 MedGen:C1848336,OMIM:300009 Dent disease 1 not provided X 50090118 TGAGTAGACTGTGTCTATTTCTTTGCAGGTGGGGTGACTCGGATGACTGTTTCTCTTGTTG 796065052 204403 NM_007315.3(STAT1):c.1151G>A (p.Gly384Asp) STAT1 Nov 15, 2014 MedGen:C3279990,OMIM:614162,Orphanet:ORPHA391487 Immunodeficiency 31C germline 2 190986924 TGTATAGATTTAGGAAGTTCAACATTTTGGGCACGCACACAAAAGTGATGAACATGGAGGA 587776904 40153 NM_001257133.1(COX14):c.57G>A (p.Met19Ile) COX14 Jan 13, 2012 MedGen:C0268237,OMIM:220110,Orphanet:ORPHA254905,SNOMED CT:67434000 Hepatic failure, early-onset, and neurologic disorder due to cytochrome C oxidase deficiency germline 12 50120100 CATTGGCTATAAGACCTTCTCTACCTCCATGATGCTTCTCACTGTGTATGGGGGGTACCTC 397516539 52970 NM_001035.2(RYR2):c.506G>A (p.Arg169Gln) RYR2 Dec 12, 2014 MedGen:C1631597,Orphanet:ORPHA3286;MedGen:CN517202 Catecholaminergic polymorphic ventricular tachycardia;not provided germline 1 237377365 GGTGGACCATACACCCTGCCTCTAAGCAGCGATCAGAAGGAGAAAAAGTACGAGTTGGAGA 121917980 79462 NM_006920.4(SCN1A):c.5314G>A (p.Ala1772Thr) SCN1A Aug 17, 2017 MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002;MedGen:CN517202 Severe myoclonic epilepsy in infancy;not provided de novo;germline;unknown 2 165991928 TCCTTCCTGGTTGTGGTGAACATGTACATCGCGGTCATCCTGGAGAACTTCAGTGTTGCTA 121909745 31135 NM_000340.1(SLC2A2):c.1259G>A (p.Trp420Ter) SLC2A2 Jan 01, 2000 MedGen:C3495427,OMIM:227810,Orphanet:ORPHA2088,SNOMED CT:61598006 Fanconi-Bickel syndrome germline 3 170998308 TCTTTGAAATTGGGCCAGGCCCGATCCCCTGGTTCATGGTGGCTGAGTTTTTCAGTCAAGG 1085307349 414303 NM_001204.6(BMPR2):c.1413+1G>A BMPR2 - MedGen:C0152171,OMIM:178600,SNOMED CT:26174007 Primary pulmonary hypertension germline 2 202542448 TTCCCAGAAGCCTGGAAAGAAAATAGCCTGGTAAGAAAAAACTAAGTTATTAAAGAGAGGA 104894087 24030 NM_000349.2(STAR):c.749G>A (p.Trp250Ter) STAR May 01, 1999 MedGen:C0342474,OMIM:201710,Orphanet:ORPHA90790,SNOMED CT:44231009 Cholesterol monooxygenase (side-chain cleaving) deficiency germline 8 38144382 CCAAATTCTCCTACCTCCTACTGCAGGGGTGGCTGCCCAAGAGCATCATCAACCAGGTCCT 104894125 27840 NM_004959.4(NR5A1):c.234G>A (p.Met78Ile) NR5A1 Mar 01, 2007 MedGen:C2751824,OMIM:612965,Orphanet:ORPHA98085 46,XY sex reversal, type 3 germline 9 124503089 CCGCTTCCAGAAATGCCTGACGGTGGGGATGCGCCTGGAAGGTGCGCGCCGCGCGGGCCTC 767898276 199852 NM_013254.3(TBK1):c.1340+1G>A TBK1 May 01, 2015 MedGen:C4225325,OMIM:616439 Frontotemporal dementia and/or amyotrophic lateral sclerosis 4 germline 12 64486018 ATTAATGCGAAAGGGGATACGATGGCTGATGTAAGTAATAGATTGAAATTTTGAAATTGAT 869320656 227099 NM_172250.2(MMAA):c.562+1G>A MMAA May 18, 2015 MedGen:C1855109,OMIM:251100,Orphanet:ORPHA79310 Methylmalonic aciduria cblA type germline 4 145642486 CTGTGGACCCTTCTTCTTGTACTAGTGGTGGTAAGTATGGCTGATTCTTTTTCAATTGCAG 386834205 71426 NM_153704.5(TMEM67):c.675G>A (p.Trp225Ter) TMEM67 Feb 23, 2015 MedGen:C1853153,OMIM:610688;MedGen:C1846357,OMIM:607361 Joubert syndrome 6;Meckel syndrome type 3 unknown 8 93772612 TTTACAGGGCATGTCTTTAACTTCAGAATGGTTTGCAAAGTATTTGCAATCATCAGCAGCT 387907134 40147 NM_016464.4(TMEM138):c.376G>A (p.Ala126Thr) TMEM138 Feb 24, 2012 MedGen:C3280906,OMIM:614465 Joubert syndrome 16 germline 11 61367998 CTTCAAATGCTGTTTGTATTCCAGAGACTAGGTAAGGACCAGAGCAAGGTCAGGCCTCTCT 74315422 16231 NM_001029871.3(RSPO4):c.353G>A (p.Cys118Tyr) RSPO4 Nov 01, 2006 MedGen:C0265998,OMIM:206800,Orphanet:ORPHA79143,SNOMED CT:23610003 Anonychia germline 20 967230 AGAGGCAGTTTTACTTGTACAAGGGGAAGTGTCTGCCCACCTGCCCGCCGGGCACTTTGGC 483353063 143142 NM_001164342.2(ZBTB20):c.1876G>A (p.Val626Met) ZBTB20 - MedGen:C0796121,OMIM:259050,Orphanet:ORPHA3042 Primrose syndrome not provided 3 114339355 TCCTTAAAGGATTACCTTATCAAGCACATGGTGACACACACAGGAGTGAGGGCATACCAGT 146093755 260138 NM_000512.4(GALNS):c.415G>A (p.Gly139Ser) GALNS Nov 27, 2015 MedGen:CN517202 not provided germline 16 88840999 AAGAAGGCCGGCTACGTCAGCAAGATTGTCGGCAAGTGGTAAGTCTCCTGGCCACGCCTGC 281874704 35899 NM_000495.4(COL4A5):c.2731G>A (p.Gly911Arg) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108621856 ATGGGACCTCCAGGCCCACCAGGACCTTTGGGAATTCCTGGCAGGAGTGGTGTACCTGGTC 387906603 38582 NM_001846.3(COL4A2):c.3110G>A (p.Gly1037Glu) COL4A2 Jan 13, 2012 MedGen:C3280970,OMIM:614483 Porencephaly 2 germline 13 110485739 GGAGGCCCGGCCACATCAAAGGAGTCAAGGGAGACATCGGAGTCCCCGGCATCCCCGGTTT 62516146 108608 NM_000277.2(PAH):c.842+5G>A PAH Dec 02, 2015 MedGen:C0031485,OMIM:261600,Orphanet:ORPHA716,SNOMED CT:154735006;MedGen:CN517202 Phenylketonuria;not provided germline;unknown 12 102852810 TCCAAGCCCATGTATACCCCCGAACCGTGAGTACTGTCCTCCAGCTACCAGTTGCCAGGCA 397514712 71462 NM_015915.4(ATL1):c.1244G>A (p.Arg415Gln) ATL1 Mar 21, 2017 MedGen:C2931355,OMIM:182600,Orphanet:ORPHA100984;MedGen:CN517202 Spastic paraplegia 3;not provided germline 14 50628155 TGAAGAAGATGGGTGGGGAAGAATTTAGCCGGCGTTACCTGCAGCAGTTGGAGAGTGAAAT 587779431 106863 NM_000090.3(COL3A1):c.3491G>A (p.Gly1164Glu) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189008108 GTGGACATCCAGGTCCCATTGGACCACCAGGGCCTCGAGGTAACAGAGGTGAAAGAGGATC 207460000 24720 m.15150G>A MT-CYB Jul 01, 2001 MedGen:C0241885 Exercise intolerance germline MT 15150 CAACAGCCTTCATAGGCTATGTCCTCCCGTGAGGCCAAATATCATTCTGAGGGGCCACAGT 863225016 213889 NM_004006.2(DMD):c.94-1G>A DMD Nov 04, 2014 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Duchenne muscular dystrophy germline X 32849821 GTTAAATTGAGTGTATTTTTTTTAATTTCAGTTTGGGAAGCAGCATATTGAGAACCTCTTC 794727897 195863 NM_000271.4(NPC1):c.1142G>A (p.Trp381Ter) NPC1 Dec 16, 2015 MedGen:C3179455,OMIM:257220 Niemann-Pick disease type C1 germline;unknown 18 23556427 TCCGGGTCACAACCAATCCAGTTGACCTCTGGTCAGCCCCCAGCAGCCAGGCTCGCCTGGA 121918039 28556 NM_000297.3(PKD2):c.1139G>A (p.Trp380Ter) PKD2 May 31, 1996 MedGen:C2751306,OMIM:613095 Polycystic kidney disease 2 germline 4 88043277 GTGAAAAAGACTTGAATGGTAGTAGCCACTGGGGAATCATTGCAACTTATAGTGGAGCTGG 72658152 32297 NM_000089.3(COL1A2):c.1981G>A (p.Gly661Ser) COL1A2 Mar 01, 1996 MedGen:C0029458,OMIM:166710,SNOMED CT:102447009 Postmenopausal osteoporosis germline 7 94418508 GCTCTTGCTTTATACTTTCAGGGTGAACCTGGTCTCAGAGGTGAAATTGGTAACCCTGGCA 863223432 210421 NM_000071.2(CBS):c.969G>A (p.Trp323Ter) CBS Nov 20, 2015 MedGen:C3150344,OMIM:236200;MedGen:CN517202 Homocystinuria due to CBS deficiency;not provided germline 21 43062381 GTGGGGTCCTGCTCAGGTGGTGGACAAGTGGTTCAAGAGCAACGATGAGGAGGCGTTCACC 773136605 193213 NM_138694.3(PKHD1):c.2854G>A (p.Gly952Arg) PKHD1 Sep 05, 2016 MedGen:C0085548,OMIM:263200,Orphanet:ORPHA731,SNOMED CT:28770003 Autosomal recessive polycystic kidney disease germline;maternal 6 52043102 GGTGACATCAACCTAATGATTTACATTACCGGAACTGGTTTCTCTGGTGACTCCCAGTTCT 794726763 187717 NM_001165963.1(SCN1A):c.5222G>A (p.Cys1741Tyr) SCN1A Dec 20, 2014 MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002;MedGen:CN517202 Severe myoclonic epilepsy in infancy;not provided de novo;germline 2 165992053 CACCCATTCTCAACAGTAAGCCACCCGACTGTGACCCTAATAAAGTTAACCCTGGAAGCTC 886042093 265304 NM_001130987.1(DYSF):c.1372G>A (p.Gly458Arg) DYSF Jan 15, 2016 MedGen:C1850889,OMIM:253601,Orphanet:ORPHA268;MedGen:C1850808,OMIM:254130,Orphanet:ORPHA45448 Limb-girdle muscular dystrophy, type 2B;Miyoshi muscular dystrophy 1 germline 2 71528393 GTGGACCCCTTTGTGGAGGTCAGCTTTGCGGGGAAAATGGTAAGGAGCAAGGGAGCAGGAG 67865220 413955 NM_000089.3(COL1A2):c.1009G>A (p.Gly337Ser) COL1A2 Sep 25, 2016 MedGen:C0268335,OMIM:130000,Orphanet:ORPHA287,SNOMED CT:20766005,SNOMED CT:83470009;MedGen:C0023931,OMIM:166200,SNOMED CT:385482004;MedGen:C0023931,OMIM:166200,SNOMED CT:385482004 Ehlers-Danlos syndrome, classic type;Osteogenesis imperfecta type I;Osteogenesis imperfecta type I germline;maternal 7 94409795 CGCGGTATTCCTGGCCCTGTTGGTGCTGCCGGTGCTACTGGTGCCAGAGGACTTGTTGTAA 587776921 48092 NM_004826.3(ECEL1):c.590G>A (p.Gly197Asp) ECEL1 Feb 04, 2013 MedGen:C3554415,OMIM:615065,Orphanet:ORPHA329457;MedGen:C3554415,OMIM:615065,Orphanet:ORPHA329457 Arthrogryposis, distal, type 5d;Arthrogryposis, distal, type 5d germline;inherited 2 232486064 GCCTCGACATGCGCGAGATCGAGCGACTGGGCCCGCGACCCATGCTAGAGGTCATCGAGGA 1085307355 414310 NM_001204.6(BMPR2):c.1451G>A (p.W484*) BMPR2 - MedGen:C0152171,OMIM:178600,SNOMED CT:26174007 Primary pulmonary hypertension germline 2 202552753 GGTCACTCAAGGAGACAATCGAAGACTGTTGGGACCAGGATGCAGAGGCTCGGCTTACTGC 72653172 32336 NM_000088.3(COL1A1):c.3073G>A (p.Gly1025Arg) COL1A1 Jun 01, 1990 MedGen:C0268360,OMIM:166210,SNOMED CT:86470003 Osteogenesis imperfecta, recessive perinatal lethal germline 17 50188768 CAGGGGGCTCCTGGTGCCGAAGGTTCCCCTGGACGAGACGGTTCTCCTGGCGCCAAGGTAA 121917894 28169 NM_000536.3(RAG2):c.686G>A (p.Arg229Gln) RAG2 May 01, 2001 MedGen:C1801959,OMIM:603554,Orphanet:ORPHA39041,SNOMED CT:307650006;MedGen:C1867362 Histiocytic medullary reticulosis;Severe combined immunodeficiency, B cell-negative germline 11 36593483 TAGGAGGACATTCACTTGCCAATAATATCCGGCCTGCCAACCTGTACAGAATAAGGGTTGA 779323689 186892 NM_000053.3(ATP7B):c.2828G>A (p.Gly943Asp) ATP7B Feb 16, 2017 MedGen:C0019202,OMIM:277900,Orphanet:ORPHA905,SNOMED CT:88518009 Wilson disease germline;unknown 13 51949699 CTTTGACGTTGGTGGTATGGATTGTAATCGGTTTTATCGATTTTGGTGTTGTTCAGAGATA 121912838 32485 NM_000094.3(COL7A1):c.6091G>A (p.Gly2031Ser) COL7A1 Oct 22, 2015 MedGen:C0079474,OMIM:226600,SNOMED CT:48528004;MedGen:CN517202 Recessive dystrophic epidermolysis bullosa;not provided germline 3 48575428 CTTGGGGAGAGGGGCCCCCCCGGGCCTTCCGGCCTTGCCGGGGAGCCTGGAAAGCCTGGTA 118204085 16549 NM_000298.5(PKLR):c.1436G>A (p.Arg479His) PKLR Apr 14, 2017 MedGen:C1849472,OMIM:266200;MedGen:CN169374 Pyruvate kinase deficiency of red cells;not specified germline 1 155293177 CTGCCATCATTGTGCTGACCACAACTGGCCGGTGAGGGGGATATTGGGAATGTCCAGATGG 121964969 15164 NM_000071.2(CBS):c.797G>A (p.Arg266Lys) CBS Oct 18, 2016 MedGen:C3150344,OMIM:236200;MedGen:CN068394 Homocystinuria due to CBS deficiency;Homocystinuria, pyridoxine-responsive germline 21 43063931 GCACGGGCGGCACCATCACGGGCATTGCCAGGAAGCTGAAGGAGAAGTGTCCTGGATGCAG 886042043 264471 NM_001844.4(COL2A1):c.2536G>A (p.Gly846Arg) COL2A1 Oct 14, 2016 MedGen:CN517202 not provided germline 12 47980643 TTCCCATTATAGGGTGCTGATGGCCAGCCTGGGGCCAAGGGTGAGCAAGGAGAGGCCGGCC 28934897 26968 NM_000431.3(MVK):c.1129G>A (p.Val377Ile) MVK Oct 24, 2017 MedGen:C0398691,OMIM:260920,Orphanet:ORPHA343,SNOMED CT:234538002;MedGen:C0398691,OMIM:260920,Orphanet:ORPHA343,SNOMED CT:234538002;MedGen:C1959626,OMIM:610377,Orphanet:ORPHA29;MedGen:CN517202;MedGen:CN169374 Hyperimmunoglobulin D with periodic fever;Hyperimmunoglobulin D with periodic fever;Mevalonic aciduria;not provided;not specified germline;paternal 12 109596515 TGCTTGGAAACCAGCATCGGTGCCCCCGGCGTCTCCATCCACTCAGCCACCTCCCTGGACA 72657697 427063 NM_001171.5(ABCC6):c.619G>A (p.Gly207Arg) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16212228 TGTCTGTTGCAGAACCCCTGTCCAGAGACTGGGGCAGCCTTCCCCTCCAAAGCCACGTTCT 80359071 67203 NM_000059.3(BRCA2):c.8243G>A (p.Gly2748Asp) BRCA2 Aug 01, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline;unknown 13 32363445 CTGTCTTAAAGAATGGCAGACTGACAGTTGGTCAGAAGATTATTCTTCATGGAGCAGAACT 180177298 200585 NM_000030.2(AGXT):c.943-1G>A AGXT Nov 27, 2014 MedGen:C0268164,OMIM:259900,Orphanet:ORPHA93598,SNOMED CT:65520001 Primary hyperoxaluria, type I germline 2 240878021 ACCCACGCACTGAGCCAGGCCCCTCCTGCAGGCGCTCCGGCTTCCCACAGTCACCACTGTG 104886223 35948 NM_000495.4(COL4A5):c.3247G>A (p.Gly1083Ser) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108655331 TCAGTATTATCTTTTTATTCGTGTTTTCAGGGTGAGCCTGGTCTGCCTGGATACCCAGGGA 267607486 265471 NM_001927.3(DES):c.735G>A (p.Glu245=) DES Aug 26, 2015 MedGen:C1832370,OMIM:601419,Orphanet:ORPHA98909;MedGen:CN517202 Myofibrillar myopathy 1;not provided germline 2 219420346 GATCGCGTTCCTTAAGAAAGTGCATGAAGAGGTATACCTTGGCCCCTCTTCCTGGGGTCAC 876657688 230451 NM_000115.4(EDNRB):c.618G>A (p.Trp206Ter) EDNRB Dec 09, 2015 MedGen:C3266898,Orphanet:ORPHA3440,SNOMED CT:47434006 Waardenburg syndrome germline 13 77903339 TATCTTCAGATATCGAGCTGTTGCTTCTTGGAGTAGAATTAAAGGAATTGGGGTTCCAAAA 201672011 32899 NM_000041.3(APOE):c.91G>A (p.Glu31Lys) APOE Nov 01, 1992 na;MedGen:C0020479,OMIM:617347,Orphanet:ORPHA412,SNOMED CT:398796005 APOE5 VARIANT;Familial type 3 hyperlipoproteinemia germline 19 44907807 GAGCAAGCGGTGGAGACAGAGCCGGAGCCCGAGCTGCGCCAGCAGACCGAGTGGCAGAGCG 398122918 48437 NM_002768.4(CHMP1A):c.28-13G>A CHMP1A Nov 01, 2012 MedGen:C3554209,OMIM:614961,Orphanet:ORPHA324569 Pontocerebellar hypoplasia type 8 germline 16 89651659 GGGCTCCGCATGTCTGACCCAGGACATTCCGGCTTCCGCTCAGTTCACGGCGAAGCAGCTG 76173977 18959 NM_000520.5(HEXA):c.1073+1G>A HEXA Nov 02, 2017 MedGen:C0039373,OMIM:272800,Orphanet:ORPHA845,SNOMED CT:111385000;MedGen:CN517202 Tay-Sachs disease;not provided germline;unknown 15 72348047 CAAGCAGCTGGAGTCCTTCTACATCCAGACGTGAGGAAGGAAGGAGGGTGGGTGGGGTCCC -1 467386 NM_000267.3(NF1):c.3113+5G>A NF1 Feb 28, 2017 MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003 Neurofibromatosis, type 1 germline 17 31230387 TCATTTTGCCAAGAGATGAAATTTAGGTGAGTTCTCAAAAGAGCAATGTAGGGTCTTGTAA 121909079 22385 NM_004637.5(RAB7A):c.484G>A (p.Val162Met) RAB7A Mar 01, 2003 MedGen:C1833219,OMIM:600882,Orphanet:ORPHA99936;MedGen:CN517202 Charcot-Marie-Tooth disease, axonal, type 2b;not provided germline 3 128807627 TTTGAGACCAGTGCCAAGGAGGCCATCAACGTGGAGCAGGCGTTCCAGACGATTGCACGGA 137853248 29957 NM_005529.6(HSPG2):c.4595G>A (p.Cys1532Tyr) HSPG2 Mar 01, 2007 MedGen:C0036391,OMIM:255800,Orphanet:ORPHA800 Schwartz Jampel syndrome type 1 germline 1 21864874 CCCGCGCCCTCGAGGTGGAGGAGTGCCGCTGCCCGCCAGGCTACATCGGTCTGTCCTGCCA 782308462 262040 NM_005918.3(MDH2):c.109G>A (p.Gly37Arg) MDH2 Feb 08, 2017 MedGen:CN240510,OMIM:617339;MedGen:CN238762 Epileptic encephalopathy, early infantile, 51;Infantile encephalopathy germline;not applicable 7 76054872 GTAGCTGTGCTAGGGGCCTCTGGAGGCATCGGGCAGCCACTTTCACTTCTCCTGAAGAACA 104886086 35690 NM_000495.4(COL4A5):c.956G>A (p.Gly319Asp) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108582903 ATGTTTTAAAGGGTTTGCCTGGTGATCCTGGTTACCCTGGTGAACCCGGAAGGGATGGTGA 104893823 27480 NM_003280.2(TNNC1):c.476G>A (p.Gly159Asp) TNNC1 Sep 22, 2017 MedGen:C2678475,OMIM:611879;MedGen:CN517202 Dilated cardiomyopathy 1Z;not provided germline 3 52451285 TTTCCACAGAGTTCCTGGAGTTCATGAAGGGTGTGGAGTAGATGCTGACCTTCACCCAGAG 104894966 24783 NM_003140.2(SRY):c.337G>A (p.Ala113Thr) SRY Aug 01, 1993 MedGen:C2748896,OMIM:400044 46,XY sex reversal, type 1 germline Y 2787267 GAAGCCGAAAAATGGCCATTCTTCCAGGAGGCACAGAAATTACAGGCCATGCACAGAGAGA 374828868 380480 NM_001145860.1(POP1):c.1748G>A (p.Gly583Glu) POP1 Apr 10, 2017 MedGen:CN241834,OMIM:617396 Anauxetic dysplasia 2 germline 8 98148852 ACCGGATGAGGAGTGAATTGCTGGTGCCTGGGTCACAGCTTATTTTAGGTCCCCATGAATC 121912476 29697 NM_000424.3(KRT5):c.1252G>A (p.Glu418Lys) KRT5 Jun 28, 2002 MedGen:C1832926,OMIM:601001;MedGen:CN517202 Epidermolysis bullosa simplex, autosomal recessive;not provided germline 12 52516824 GCCAATCTGCAGAACGCCATTGCGGATGCCGAGCAGCGTGGGGAGCTGGCCCTCAAGGATG 121909724 31203 NM_002437.4(MPV17):c.359G>A (p.Trp120Ter) MPV17 May 17, 2012 MedGen:C1850406,OMIM:256810,Orphanet:ORPHA255229 Navajo neurohepatopathy germline 2 27312510 CACTTAATGGACTGTCAGCCCAGGACAACTGGGCCAAACTACAGCGGGTGAGCTGGGCAGG 201105857 48168 NM_153373.3(PHYKPL):c.718G>A (p.Gly240Arg) PHYKPL Nov 01, 2013 MedGen:C3554344,OMIM:615011 Phosphohydroxylysinuria germline 5 178222564 CTCCTCTGCCACAGGCACATCCGCAAGGCCGGAGGGGTCTTTGTTGCAGATGAGATCCAGG 886041886 264495 NM_130466.3(UBE3B):c.941-1G>A UBE3B Jul 27, 2016 MedGen:CN517202 not provided germline 12 109499632 GCCCATCACACTCAGCCTTCTCTCTCTGTAGGCAACCTCCTACACTTGGGCTCCCTCAGCC 201947677 16122 NM_001080413.3(NOBOX):c.1064G>A (p.Arg355His) NOBOX Sep 01, 2007 MedGen:C1969060,OMIM:611548 Premature ovarian failure 5 germline 7 144399847 CTTTCCCCCCATAGGTGTGGTTCCAGAATCGCCGGGCCAAGTGGCGAAAAATGGAGAAACT 137852571 24856 NM_000044.4(AR):c.2191G>A (p.Val731Met) AR Apr 01, 1995 Human Phenotype Ontology:HP:0012125,MedGen:C0376358,OMIM:176807,SNOMED CT:399068003 Malignant tumor of prostate unknown X 67717495 TCTTCTTCTCCAGGCTTCCGCAACTTACACGTGGACGACCAGATGGCTGTCATTCAGTACT 72554331 26045 NM_000531.5(OTC):c.236G>A (p.Gly79Glu) OTC Feb 01, 2002 MedGen:C0268542,OMIM:311250,Orphanet:ORPHA664,SNOMED CT:80908008;MedGen:CN517202 Ornithine carbamoyltransferase deficiency;not provided germline;unknown X 38369815 TTGATTTATAGTATTTGCCTTTATTGCAAGGGAAGTCCTTAGGCATGATTTTTGAGAAAAG 121912918 32256 NM_000090.3(COL3A1):c.3518G>A (p.Gly1173Glu) COL3A1 Jan 01, 1992 MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189008135 CAGGGCCTCGAGGTAACAGAGGTGAAAGAGGATCTGAGGTAAGACATCACTTATACGTATG 387907305 45850 NM_003036.3(SKI):c.101G>A (p.Gly34Asp) SKI Feb 01, 2015 MedGen:C1321551,OMIM:182212,SNOMED CT:83092002 Shprintzen-Goldberg syndrome de novo;unknown 1 2228867 TCCACCTGAGCTCCATGAGCTCGCTGGGCGGCCCGGCCGCTTTCTCGGCGCGCTGGGCGCA 1064796819 411392 NM_005710.2(PQBP1):c.641+1G>A PQBP1 Mar 10, 2017 MedGen:CN517202 not provided germline X 48902796 GGACCCTAGCTCATACTCAGACGCCCCCCGGTAAGTGACAACCCCTCTTGACTCAGTACGT 193302904 222911 NM_000202.7(IDS):c.592G>A (p.Asp198Asn) IDS May 17, 2010 MedGen:C0026705,OMIM:309900,SNOMED CT:70737009 Mucopolysaccharidosis, MPS-II de novo X 149498223 GTGCTGGATGTTCCCGAGGGCACCTTGCCTGACAAACAGAGCACTGAGCAAGCCATACAGT 886039481 259907 NM_000318.2(PEX2):c.740G>A (p.Cys247Tyr) PEX2 Aug 14, 2017 MedGen:CN517202 not provided germline 8 76983439 TAGCCACCAGTGGCAAAGAATGCGCTCTATGTGGAGAGTGGCCCACCATGCCTCACACCAT 267606947 18911 NM_006623.3(PHGDH):c.781G>A (p.Val261Met) PHGDH May 01, 2009 MedGen:C1866174,OMIM:601815 Phosphoglycerate dehydrogenase deficiency germline 1 119735432 TCTGGCCAGTGTGCCGGGGCTGCACTGGACGTGTTTACGGAAGTAAGTGCCTGGCAGCCTC 886044231 273888 NM_001848.2(COL6A1):c.932G>A (p.Gly311Asp) COL6A1 Aug 15, 2016 MedGen:CN029274,OMIM:158810;MedGen:CN033863,OMIM:254090;MedGen:CN517202 Bethlem myopathy 1;Ullrich congenital muscular dystrophy 1;not provided germline 21 45990259 CCCCTCACACCCGCTTCCTGTCTCCGCAGGGCTCCAGGGGACCCAAGGGCTACAAGGTGAG 786205164 187949 NM_004935.3(CDK5):c.580+1G>A CDK5 May 05, 2015 MedGen:C4225359,OMIM:616342 Lissencephaly 7 with cerebellar hypoplasia germline 7 151055276 ACATGTGGTCAGCCGGCTGCATCTTTGCAGGTGATGTGCTGGGGTGTTGCAGAGGCACCTT 794726877 190226 NM_000203.4(IDUA):c.152G>A (p.Gly51Asp) IDUA Feb 11, 2016 Human Phenotype Ontology:HP:0000943,MedGen:C0086795,OMIM:607014,Orphanet:ORPHA93473;MedGen:C0023786,Orphanet:ORPHA579 Hurler syndrome;Mucopolysaccharidosis type I germline 4 987236 GGCCCCTGCGGCGCTTCTGGAGGAGCACAGGCTTCTGGTGAGCGCTCCGCGGCCTCCGGGA 80358048 131394 NM_007294.3(BRCA1):c.5468-1G>A BRCA1 May 05, 2016 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome germline 17 43045803 ACTAATCTCTGCTTGTGTTCTCTGTCTCCAGCAATTGGGCAGATGTGTGAGGCACCTGTGG 886039583 260299 NM_000444.5(PHEX):c.1079+1G>A PHEX Jul 07, 2016 MedGen:CN517202 not provided germline X 22099152 GTTTAGGATATTAGGGTCTGAGAGAAAGAAGTAAGAACTTTCACATGAATTTTACTGTGAC 104894443 24326 NM_000161.2(GCH1):c.633G>A (p.Met211Ile) GCH1 Apr 28, 1995 MedGen:C0268467,OMIM:233910,Orphanet:ORPHA2102,SNOMED CT:23447005 GTP cyclohydrolase I deficiency germline 14 54844137 AACCTGTGTTGCCTTATTTTGTAGACACATGTGTATGGTAATGCGAGGTGTACAGAAAATG 281874680 47363 NM_000495.4(COL4A5):c.1835G>A (p.Gly612Asp) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108598757 GAGGTCCCCCTGGGAACCCAGGTTTACCAGGCCTCCCAGGGAATATAGGGCCTATGGGTCC 142326926 76619 NM_014336.4(AIPL1):c.784G>A (p.Gly262Ser) AIPL1 Mar 30, 2016 MedGen:C1858386,OMIM:604393;MedGen:CN517202 Leber congenital amaurosis 4;not provided germline 17 6426615 CACACCAGTGATATTCTCCGGCACCACCCAGGTGCGCGGGGCTGCAGGGGCGGACAGTGAG -1 439883 NM_001197104.1(KMT2A):c.11071+1G>A KMT2A Aug 09, 2017 MedGen:C1854630,OMIM:605130,Orphanet:ORPHA319182 Wiedemann-Steiner syndrome unknown 11 118510119 GCTTTCAGATCTGTGCAGAAAGTATTGAAGGTGAGTGGATTAAATCAGGTTGACCCATCAG 797044437 20899 NM_022336.3(EDAR):c.803+1G>A EDAR Oct 15, 2008 MedGen:C0406702,OMIM:224900,Orphanet:ORPHA248,SNOMED CT:27025001 Autosomal recessive hypohidrotic ectodermal dysplasia syndrome germline 2 108910459 GACAGCAACTCCAGCAAAGCCCACCAAGAGGTATGTGGAAGCCCCCAGCACCAAGCTGAAG 397514755 75599 NM_001193333.2(CORO1A):c.400G>A (p.Val134Met) CORO1A Jun 01, 2013 MedGen:C3809383,OMIM:615401,Orphanet:ORPHA228003 Immunodeficiency 8 germline 16 30186894 GTCGTCACCCTGGAGGGCCACACCAAGCGTGTGGGCATTGTGGCCTGGCACACCACAGCCC 397515421 48364 NM_017909.3(RMND1):c.1250G>A (p.Arg417Gln) RMND1 Dec 22, 2015 MedGen:C3554067,OMIM:614922,Orphanet:ORPHA324535;MedGen:C0751651,Orphanet:ORPHA68380 Combined oxidative phosphorylation deficiency 11;Mitochondrial diseases germline 6 151405787 AGCACTGCATGGAACTAACAGATCTAATGCGGAATCACCTGAATGAGAAGAGGGCACTCCG 137852418 25264 NM_000132.3(F8):c.1649G>A (p.Arg550His) F8 Jan 01, 1995 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154957060 CAACTAAATCAGATCCTCGGTGCCTGACCCGCTATTACTCTAGTTTCGTTAATATGGAGAG 121918237 16470 NM_001177317.1(SLC34A3):c.586G>A (p.Gly196Arg) SLC34A3 Feb 01, 2006 MedGen:C0342645,OMIM:241530,SNOMED CT:237891005 Autosomal recessive hypophosphatemic bone disease germline 9 137233234 CACAGGGCTTTCAGCGGCTCGGCGGTGCACGGGATCTTCAACTGGCTCACAGTGCTGGTCC 886039474 260326 NM_003688.3(CASK):c.609G>A (p.Trp203Ter) CASK Apr 04, 2015 MedGen:CN517202 not provided germline X 41665376 AGAGCCTTACGGAAAGCCTGTAGACGTCTGGGGGTGCGGTGTGATCCTTTTTATCCTGCTC 886042238 266054 NM_006517.4(SLC16A2):c.576-1G>A SLC16A2 Jul 09, 2015 MedGen:C0795889,OMIM:300523,Orphanet:ORPHA59 Allan-Herndon-Dudley syndrome germline X 74524358 CTGAGGACAGCTCTTGGTATTTCTCCCACAGCTCCCTAAGCCTGCGCTACTTCACCTACGG 370356566 359546 NM_001099287.1(NIPAL4):c.688G>A (p.Gly230Arg) NIPAL4 May 26, 2016 MedGen:CN517202 not provided germline 5 157471733 GGGAAGCTGGGCTGTGTGATCTGTGTGGCCGGAAGCACAGTGATGGTGATACATGCTCCTG 201540674 51186 RTEL1:c.2402G>A (p.Arg801His) RTEL1 Sep 25, 2017 MedGen:C0265965,Orphanet:ORPHA1775,SNOMED CT:74911008;MedGen:C3554656,OMIM:615190;MedGen:C1800706,OMIM:178500,Orphanet:ORPHA79126,SNOMED CT:28168000;MedGen:C4225346,OMIM:616373;MedGen:CN517202 Dyskeratosis congenita;Dyskeratosis congenita, autosomal recessive, 5;Idiopathic fibrosing alveolitis, chronic form;Pulmonary fibrosis and/or bone marrow failure, telomere-related, 3;not provided germline;inherited;unknown 20 63695619 CCTTCCAGTGCCCTGCCTGTGACTTCCAGCGCTGCCAAGCCTGCTGGCAACGGCACCTTCA 755910254 275418 NM_001793.5(CDH3):c.1085G>A (p.Trp362Ter) CDH3 Sep 09, 2016 MedGen:C1832162,OMIM:601553,Orphanet:ORPHA1573 Juvenile macular degeneration and hypotrichosis germline 16 68682390 CTGATCTGGACGCCCCCAACTCACCAGCGTGGCGTGCCACCTACCTTATCATGGGCGGTGA 118192119 76843 NM_000540.2(RYR1):c.1534G>A (p.Glu512Lys) RYR1 May 11, 2010 MedGen:C0751951,OMIM:117000,Orphanet:ORPHA597,SNOMED CT:43152001;MedGen:CN517202 Central core disease;not provided unknown 19 38455328 TTTGCTGAGTTTGCAGGGGAGGAGGCAGCCGAGTCCTGGAAAGAGATTGTGAATCTTCTCT 671 33429 NM_000690.3(ALDH2):c.1510G>A (p.Glu504Lys) ALDH2 Apr 04, 2013 MedGen:C2674838,OMIM:610251;MedGen:C0001973,OMIM:103780;MedGen:C3149226;MedGen:C2676227;MedGen:C2608086 Acute alcohol sensitivity;Alcohol dependence;Esophageal cancer, alcohol-related, susceptibility to;Sublingual nitroglycerin, susceptibility to poor response to;Susceptibility to hangover germline 12 111803962 TTGGGCGAGTACGGGCTGCAGGCATACACTGAAGTGAAAACTGTGAGTGTGGGACCTGCTG 144133667 39586 NM_006859.3(LIAS):c.746G>A (p.Arg249His) LIAS Dec 09, 2011 MedGen:C3280887,OMIM:614462,Orphanet:ORPHA401859 Pyruvate dehydrogenase lipoic acid synthetase deficiency germline 4 39470027 CAACAGTCCTGCTGTTTTCCAGTAAGGTTCGTGATCCTCGGGCCAATTTTGATCAGTCCCT 879254522 245558 NM_000527.4(LDLR):c.428G>A (p.Cys143Tyr) LDLR Mar 30, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline;not applicable 19 11105334 ACTGCTTGGACGGCTCAGACGAGGCCTCCTGCCCGGTGCTCACCTGTGGTCCCGCCAGCTT 104886294 36093 NM_000495.4(COL4A5):c.4614G>A (p.Trp1538Ter) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108692851 CTTTGCTTCAAGAAATGACTATTCTTACTGGCTCTCTACCCCAGAGCCCATGCCAATGAGC 1057519634 362624 NM_031267.3(CDK13):c.2252G>A (p.Arg751Gln) CDK13 Feb 24, 2017 MedGen:CN240690,OMIM:617360 Congenital heart defects, dysmorphic facial features, and intellectual developmental disorder germline 7 40001930 AAAAGGAAGGCTTTCCAATTACAGCAATTCGAGAAATTAAAATTCTCCGGCAGCTTACCCA 104894420 22713 NM_002312.3(LIG4):c.1406G>A (p.Gly469Glu) LIG4 Dec 01, 2001 MedGen:C1847827,OMIM:606593,Orphanet:ORPHA99812 Lig4 syndrome germline 13 108209863 TGGATGAATTGGACATTTTAATTGTTGGAGGATATTGGGGTAAAGGATCACGGGGTGGAAT 776421777 245368 NM_000527.4(LDLR):c.91G>A (p.Glu31Lys) LDLR Mar 25, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11100246 CTCTCAGTGGGCGACAGATGCGAAAGAAACGAGTTCCAGTGCCAAGACGGGAAATGCATCT 111033758 36586 NM_000155.3(GALT):c.747G>A (p.Trp249Ter) GALT Oct 03, 2016 MedGen:C0268151,OMIM:230400,Orphanet:ORPHA79239,SNOMED CT:124354006 Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase unknown 9 34648821 GTTAGTACTGGTCCCCTTCTGGGCAACATGGCCCTACCAGACACTGCTGCTGCCCCGTCGG 587779678 107183 NM_000090.3(COL3A1):c.2141G>A (p.Gly714Glu) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188999489 CTTATTTTCAGGGTGCTGCTGGTCCTCCTGGGCCACCTGGTGCTGCTGGTACTCCTGGTCT 724159827 172096 NM_002335.3(LRP5):c.4651G>A (p.Asp1551Asn) LRP5 Feb 21, 2018 Human Phenotype Ontology:HP:0006557,MedGen:C0158683,OMIM:174050,SNOMED CT:72925005;na Congenital cystic disease of liver;POLYCYSTIC LIVER DISEASE 4 WITH KIDNEY CYSTS germline 11 68448873 ACGCCCTGCAGCACCGACGTGTGTGACAGCGACTACAGCGCCAGCCGCTGGAAGGCCAGCA 387907301 45837 NM_001167.3(XIAP):c.608G>A (p.Cys203Tyr) XIAP Oct 02, 2012 MedGen:C1845076,OMIM:300635 Lymphoproliferative syndrome 2, X-linked germline X 123886270 GTATTGGTGACCAAGTGCAGTGCTTTTGTTGTGGTGGAAAACTGAAAAATTGGGAACCTTG 202134424 125898 NM_001282227.1(ADA2):c.13G>A (p.Gly5Arg) ADA2 Mar 06, 2014 MedGen:C3887654,OMIM:615688 Polyarteritis nodosa, childhoood-onset germline 22 17209539 CTGTTGTTGAAAGAAAAGATGATGCGGCTGGGGGGGCGGCTGGTGCTGAACACCAAGGAGG 104886111 35734 NM_000495.4(COL4A5):c.1276G>A (p.Gly426Arg) COL4A5 Aug 03, 2017 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917;MedGen:CN517202 Alport syndrome, X-linked recessive;not provided germline X 108591168 ATTTCCATTCCTGGACCTCCTGGACTTGACGGACAGCCTGGGGCTCCTGGGCTTCCAGGGC 794726682 40078 NM_015175.2(NBEAL2):c.1823G>A (p.Trp608Ter) NBEAL2 Jul 17, 2011 MedGen:C0272302,OMIM:139090,SNOMED CT:51720005 Gray platelet syndrome germline 3 46995558 GGCCAGGGCCTGGCTTCACCTTTCATGCCTGGCTCTGTCTGCACCCTATGGATACAGCACC 587777727 165912 NM_032492.3(JAGN1):c.3G>A (p.Met1Ile) JAGN1 Sep 01, 2014 Human Phenotype Ontology:HP:0005541,MedGen:C1853118,Orphanet:ORPHA42738;MedGen:C4014954,OMIM:616022,Orphanet:ORPHA423384 Severe congenital neutropenia;Severe congenital neutropenia 6, autosomal recessive germline 3 9890725 AGGGGTTCGGGGGTTCTGGGCAGGCACAATGGCGTCTCGAGCAGGCCCGCGAGCGGCCGGC 144716013 167355 NM_001813.2(CENPE):c.2797G>A (p.Asp933Asn) CENPE Dec 07, 2016 MedGen:C4015080,OMIM:616051;MedGen:CN517202 Primary autosomal recessive microcephaly 13;not provided germline 4 103158691 GAAGTAAAAACTTTAACTCAAGAAAAAGATGATCTAAAACAACTCCAAGAAAGCTTGCAAA 797044487 172113 NM_170707.3(LMNA):c.1968G>A (p.Gln656=) LMNA Aug 01, 2015 MedGen:C4016241;MedGen:C0033300,OMIM:176670,Orphanet:ORPHA740,SNOMED CT:238870004 Hutchinson-Gilford progeria syndrome, atypical;Hutchinson-Gilford syndrome germline 1 156138757 CCTCCTGGGCAACTCCAGCCCCCGAACCCAGGTGAGTTGTCTCTGCTTTGTCTCCAAATCC 367543025 51246 NM_000057.3(BLM):c.3197G>A (p.Cys1066Tyr) BLM Mar 28, 2013 MedGen:C0005859,OMIM:210900,Orphanet:ORPHA125,SNOMED CT:4434006 Bloom syndrome not provided 15 90794344 AGAAACACCCAGATGTTTCTTGTGATAATTGCTGTAAAACAAAGGTAAAAAAAGAAGTTTT 45466296 59084 NM_000548.4(TSC2):c.848+1G>A TSC2 Oct 13, 2014 MedGen:C1860707,OMIM:613254;MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000;MedGen:CN517202 Tuberous sclerosis 2;Tuberous sclerosis syndrome;not provided germline 16 2057179 CTACAACATGTGCCACCTCATGGAGGACAGGTGAGTGTGGTGGGTGGGGCGCAGGGCAGTG 111033647 18650 NM_000155.3(GALT):c.130G>A (p.Val44Met) GALT Dec 04, 2012 MedGen:C0268151,OMIM:230400,Orphanet:ORPHA79239,SNOMED CT:124354006 Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase germline 9 34647136 TACAACCCGCTGCAGGATGAGTGGGTGCTGGTGTCAGCTCACCGCATGAAGCGGCCCTGGC 753723351 170950 NM_030777.3(SLC2A10):c.1334G>A (p.Gly445Glu) SLC2A10 Sep 10, 2014 MedGen:C1859726,OMIM:208050,Orphanet:ORPHA3342 Arterial tortuosity syndrome germline 20 46726909 TCAGCGAGATCTACCCTGTGGAGATACGAGGAAGAGCCTTCGCCTTCTGCAACAGCTTCAA 387906918 39458 NM_030928.3(CDT1):c.196G>A (p.Ala66Thr) CDT1 Feb 27, 2011 MedGen:C3151120,OMIM:613804 Meier-Gorlin syndrome 4 germline 16 88804027 GCCCCCGGACGCGACCAGGCCAGGCCACCGGCCCGCAGGAGACTGCGGCTGTCGGTGGACG 587784239 169388 NM_000430.3(PAFAH1B1):c.1064G>A (p.Ser355Asn) PAFAH1B1 Feb 08, 2013 MedGen:C1843916,OMIM:607432 Lissencephaly 1 germline 17 2680225 TGTTCCATTCTGGGGGGAAGTTTATTTTGAGTTGTGCTGATGACAAGACCCTACGCGTATG 398122863 44118 NM_001006658.2(CR2):c.2297G>A (p.Trp766Ter) CR2 Jul 06, 2012 MedGen:C3542922,OMIM:614699 Common variable immunodeficiency 7 germline 1 207474297 AGATGTGTCAAGATGCTGAAAATGGAATTTGGTTCAAAAAGATTCCACTTTGTAAAGGTAA 121908188 19535 NM_020451.2(SELENON):c.943G>A (p.Gly315Ser) SELENON Jul 24, 2017 MedGen:C0546264,OMIM:255310,Orphanet:ORPHA2020,SNOMED CT:240084007;MedGen:C0410180,OMIM:602771,SNOMED CT:240063002;MedGen:CN517202 Congenital myopathy with fiber type disproportion;Eichsfeld type congenital muscular dystrophy;not provided germline 1 25809753 CCCTTTTGGTTCTCCCCTGCTCAGTTCACCGGCCACATCATCCTCTCCAAAGACGCCACCC -1 433247 NM_000267.3(NF1):c.2331G>A (p.Trp777Ter) NF1 Nov 30, 2016 MedGen:CN169374 not specified germline 17 31227528 CAAGTGATAATTGCCTTCATTTTAGGCTTGGGAAGATACACATGCAAAATGGGAACAAGCA 121909740 31153 NM_006516.2(SLC2A1):c.823G>A (p.Ala275Thr) SLC2A1 Apr 25, 2017 MedGen:CN030711,OMIM:606777;MedGen:C1842534,OMIM:612126,Orphanet:ORPHA98811;MedGen:CN517202 GLUT1 deficiency syndrome 1;GLUT1 deficiency syndrome 2;not provided germline 1 42929637 TCCCCCGCCTACCGCCAGCCCATCCTCATCGCTGTGGTGCTGCAGCTGTCCCAGCAGCTGT 119462983 18283 NM_007171.3(POMT1):c.193G>A (p.Gly65Arg) POMT1 May 26, 2009 MedGen:C3150415,OMIM:613155 Congenital muscular dystrophy-dystroglycanopathy with mental retardation, type B1 germline 9 131506184 ATGAAACAAATCTTCTTCTTGGATGACAGTGGGCCGCCATTTGGCCACATGGTGCTGGCCT 121907945 19075 NM_000152.4(GAA):c.877G>A (p.Gly293Arg) GAA Nov 16, 2017 MedGen:CN568813;MedGen:C0017921,OMIM:232300,Orphanet:ORPHA365,SNOMED CT:124462004,SNOMED CT:237967002 Glycogen storage disease II, adult form;Glycogen storage disease, type II germline;inherited 17 80107818 TGCATGTCCCAGCCCGGTGCGAACCTCTACGGGTCTCACCCTTTCTACCTGGCGCTGGAGG 121918231 16477 NM_015697.7(COQ2):c.590G>A (p.Arg197His) COQ2 Jun 07, 2016 MedGen:CN229570,Orphanet:ORPHA35656;MedGen:C1843920,OMIM:607426 Coenzyme Q10 deficiency, primary;Coenzyme Q10 deficiency, primary 1 germline 4 83273598 TATGTTTTAAGGTTACAAGAACAGCCAATCGTCCAATAGCCGCTGGAGACATTTCAACTTT 121918680 27662 NM_001063.3(TF):c.1180G>A (p.Glu394Lys) TF Jan 01, 2002 MedGen:C1859593,OMIM:209300 Atransferrinemia germline 3 133759306 AAAATAGAGTGTGTATCAGCAGAGACCACCGAAGACTGCATCGCCAAGATCATGGTATGTC 886039903 260857 NM_021032.4(FGF12):c.341G>A (p.Arg114His) FGF12 Jul 21, 2017 MedGen:C4310685,OMIM:617166;MedGen:CN517202 Epileptic encephalopathy, early infantile, 47;not provided de novo;germline 3 192335434 CTCTCTTCAATCTAATTCCCGTGGGCCTGCGTGTAGTGGCCATCCAAGGAGTGAAGGCTAG 137854556 79232 NM_001042492.2(NF1):c.3827G>A (p.Arg1276Gln) NF1 Oct 04, 2017 MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003;MedGen:CN517202 Neurofibromatosis, type 1;not provided germline;unknown 17 31235729 AATTGGCAGACTCCATGCAGACTCTCTTCCGAGGCAACAGCTTGGCCAGTAAAATAATGAC 81002883 67455 NM_000059.3(BRCA2):c.9256+1G>A BRCA2 Oct 02, 2015 MedGen:C2675520,OMIM:612555 Breast-ovarian cancer, familial 2 germline 13 32380146 GATTTGTCGTTTCTGTTGTGAAAAAAACAGGTAATGCACAATATAGTTAATTTTTTTTATT 201849460 481154 NM_001622.3(AHSG):c.950G>A (p.Arg317His) AHSG Feb 01, 2018 Gene:780898,MedGen:C1859878,OMIM:203650 Alopecia mental retardation syndrome 1 germline 3 186620776 ACCAGTTGCACCGGGCGCACTACGACCTGCGCCACACCTTCATGGGTGTGGTCTCATTGGG 886042051 264921 NM_000206.2(IL2RG):c.758-1G>A IL2RG Oct 27, 2016 MedGen:C1279481,OMIM:300400,SNOMED CT:203592006;MedGen:CN517202 X-linked severe combined immunodeficiency;not provided germline X 71108696 AAGGTCCACTTTGCTTTTCTTTTTTCTATAGAGAATCCTTTCCTGTTTGCATTGGAAGCCG 80358229 19624 NM_030777.3(SLC2A10):c.510G>A (p.Trp170Ter) SLC2A10 Sep 10, 2014 MedGen:C1859726,OMIM:208050,Orphanet:ORPHA3342 Arterial tortuosity syndrome germline 20 46725546 CCCCTGGGGATGGAGGCACATGTTCGGCTGGGCCACTGCACCTGCTGTCCTGCAATCCCTC 960468382 448072 NM_020451.2(SELENON):c.1469G>A (p.Trp490Ter) SELENON Dec 13, 2016 MedGen:C0410180,OMIM:602771,SNOMED CT:240063002 Eichsfeld type congenital muscular dystrophy germline 1 25813962 CCCTGCTCAACGAGAGCTTCATCAGCACCTGGTCCCTGGTGAAGGAGCTGGAGGAACTGCA 193922097 44307 NM_000033.3(ABCD1):c.421G>A (p.Ala141Thr) ABCD1 Feb 03, 2014 MedGen:C0162309,OMIM:300100,Orphanet:ORPHA43,SNOMED CT:65389002 Adrenoleukodystrophy germline X 153725687 GGCTGGCAGCTGCTGCAGTGGCTCCTCATCGCCCTCCCTGCTACCTTCGTCAACAGTGCCA 916516745 420739 NM_003000.2(SDHB):c.654G>A (p.Trp218Ter) SDHB Sep 09, 2013 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 1 17022719 ATCATCCCTGGTTTTCCAGGCCTATCGCTGGATGATTGACTCCAGAGATGACTTCACAGAG 104894230 27651 NM_005343.3(HRAS):c.35G>A (p.Gly12Asp) HRAS Apr 27, 2017 MedGen:C0587248,OMIM:218040,Orphanet:ORPHA3071,SNOMED CT:309776008;MedGen:C4016398;Human Phenotype Ontology:HP:0100013,MeSH:D001943,MedGen:C1458155,Orphanet:ORPHA180250,SNOMED CT:126926005;MedGen:C0853032;MedGen:CN166718,Orphanet:ORPHA98733;MedGen:CN517202 Costello syndrome;Costello syndrome, severe;Neoplasm of the breast;Nevus sebaceous;Rasopathy;not provided germline;somatic;unknown 11 534288 CGGAATATAAGCTGGTGGTGGTGGGCGCCGGCGGTGTGGGCAAGAGTGCGCTGACCATCCA 118204071 16582 NM_000237.2(LPL):c.1081G>A (p.Ala361Thr) LPL Mar 31, 1993 MedGen:C0023817,OMIM:238600,Orphanet:ORPHA309015,SNOMED CT:238086005,SNOMED CT:275598004 Hyperlipoproteinemia, type I germline 8 19959322 GGGACTGAGAGTGAAACCCATACCAATCAGGCCTTTGAGATTTCTCTGTATGGCACCGTGG 267606902 29174 NM_022844.2(MYH11):c.2135G>A (p.Arg712Gln) MYH11 Sep 15, 2017 MedGen:C1851504,OMIM:132900;MedGen:CN118826,Orphanet:ORPHA91387 Aortic aneurysm, familial thoracic 4;Thoracic aortic aneurysm and aortic dissection germline 16 15748092 ATGGGGTGCTGGAAGGCATTCGCATCTGCCGGCAGGGCTTCCCCAACCGGATCGTCTTCCA 886043139 269799 NM_032581.3(FAM126A):c.415-1G>A FAM126A Jan 11, 2016 MedGen:C1864663,OMIM:610532,SNOMED CT:702379005 Hypomyelination and Congenital Cataract germline 7 22976809 TTTTTTCTTTATTCAAATGTCTTTTCTCTAGCCTTCCAGCATTGGGTCCATGGCTCTGACT 80358028 46222 NM_007294.3(BRCA1):c.5406+1G>A BRCA1 Oct 02, 2015 MedGen:C2676676,OMIM:604370 Breast-ovarian cancer, familial 1 germline 17 43049120 AAGGAGCTTTCATCATTCACCCTTGGCACAGTAAGTATTGGGTGCCCTGTCAGAGAGGGAG 72556258 103085 NM_000531.5(OTC):c.409G>A (p.Ala137Thr) OTC - MedGen:CN517202 not provided unknown X 38401297 TGCCACAGTGTATTGTCTAGCATGGCAGATGCAGTATTGGCTCGAGTGTATAAACAATCAG 118204449 15750 NM_000512.4(GALNS):c.689G>A (p.Trp230Ter) GALNS Jul 01, 2003 MedGen:C0086651,OMIM:253000,Orphanet:ORPHA309297,SNOMED CT:7259005 Mucopolysaccharidosis, MPS-IV-A germline 16 88835794 AGGCACGGCACCACCCCTTTTTCCTCTACTGGGCTGTCGACGCCACGCACGCACCCGTCTA 886041051 263456 NM_138361.5(LRSAM1):c.2081G>A (p.Cys694Tyr) LRSAM1 Nov 08, 2016 Gene:431712,MedGen:C3280797,OMIM:614436,Orphanet:ORPHA300319 Charcot-Marie-Tooth disease type 2P germline 9 127502808 AGATGATCTTCCTCAACTGTGGCCACGTCTGCTGCTGCCAGCAGTGCTGCCAGCCACTGCG 121434300 20517 NM_006329.3(FBLN5):c.212G>A (p.Arg71Gln) FBLN5 Jun 01, 2011 MedGen:C1837187,OMIM:608895 Age-related macular degeneration 3 germline 14 91937114 ACCAAAATGGCGGGTATTTATGCATTCCCCGGACAAACCCTGTGTATCGAGGGCCCTACTC -1 482213 NM_172107.3(KCNQ2):c.927+1G>A KCNQ2 Dec 07, 2017 MedGen:CN517202 not provided germline 20 63439597 ATCGGTGTCTCCTTCTTCGCGCTGCCTGCAGTAAGTCCAGCTGCCCCTGCCTGCCTTGGAG 587784235 169383 NM_000430.3(PAFAH1B1):c.1002+5G>A PAFAH1B1 Feb 08, 2013 MedGen:C1843916,OMIM:607432 Lissencephaly 1 germline 17 2676611 GTACTGGCATGTGCCTTATGACCCTCGTAAGTTTGCATAATCTTACCATTTCTTTTGCATC 1014839148 440674 NM_000091.4(COL4A3):c.520G>A (p.Gly174Arg) COL4A3 Oct 18, 2016 MedGen:CN517202 not provided germline 2 227248494 GATATAGAACTTGATGCAAAAGGCGACCCCGGGTTGCCAGGGGCTCCAGGACCCCAGGTAC 121909297 23213 NM_000337.5(SGCD):c.784G>A (p.Glu262Lys) SGCD Nov 01, 1998 MedGen:C1832525,OMIM:601287,Orphanet:ORPHA219 Limb-girdle muscular dystrophy, type 2F germline 5 156759301 ACGCCTACAGGAACGAGGCAGAAGGTCTTCGAGATCTGCGTCTGCGCCAATGGGAGATTAT 72645320 32388 NM_000088.3(COL1A1):c.761G>A (p.Gly254Glu) COL1A1 Apr 01, 2001 MedGen:C0268362,OMIM:259420,Orphanet:ORPHA216812,SNOMED CT:385483009 Osteogenesis imperfecta type III germline 17 50197053 TCTTCTTCATCTCTCTCCAGGGTGCTCGAGGATTGCCCGGAACAGCTGGCCTCCCTGGAAT 57019720 18046 NM_000226.3(KRT9):c.511G>A (p.Val171Met) KRT9 Jul 30, 2003 Human Phenotype Ontology:HP:0007559,MedGen:C1721006,OMIM:144200,Orphanet:ORPHA2199;MedGen:CN517202 Epidermolytic palmoplantar keratoderma;not provided germline 17 41571482 AATTCTCGGCTGGCCTCTTACTTGGATAAGGTGCAGGCTCTAGAGGAGGCCAACAACGACC 1064794226 406510 NM_000038.5(APC):c.1778G>A (p.Trp593Ter) APC Oct 04, 2017 MedGen:C2713442,OMIM:175100;MedGen:CN517202 Familial adenomatous polyposis 1;not provided germline 5 112834985 CAACCCTCAAAAGCGTATTGAGTGCCTTATGGAATTTGTCAGCACATTGCACTGAGAATAA 147764579 273881 NM_000070.2(CAPN3):c.1466G>A (p.Arg489Gln) CAPN3 Jul 06, 2017 MedGen:C1869123,OMIM:253600,Orphanet:ORPHA267;MedGen:CN517202 Limb-girdle muscular dystrophy, type 2A;not provided germline 15 42401752 GCTTCCTGGTGGCCCTGATGCAGAAGAACCGGCGGAAGGACCGGAAGCTAGGGGCCAGTCT 796052507 201886 NM_000816.3(GABRG2):c.770-1G>A GABRG2 Jul 09, 2013 MedGen:CN517202 not provided germline 5 162142163 GTTGTATGGTGTTATCTTTGGTCTGTTCCAGGAGATTATGTGGTCATGTCTGTCTACTTTG 121908625 21065 NM_001128227.2(GNE):c.1820G>A (p.Gly607Glu) GNE Sep 01, 2001 MedGen:C1853926,OMIM:605820 Nonaka myopathy germline 9 36219927 AACTGGGCCACCTTGTTGTGTCTCTGGATGGGCCTGATTGTTCCTGTGGAAGCCATGGGTG 137852528 24981 NM_000291.3(PGK1):c.802G>A (p.Asp268Asn) PGK1 Jul 10, 1980 MedGen:C1970848,OMIM:300653,Orphanet:ORPHA713 Phosphoglycerate kinase 1 deficiency germline X 78123240 TTTGATGAAGAGGGAGCCAAGATTGTCAAAGACCTAATGTCCAAAGCTGAGAAGAATGGTG 104893879 19550 NM_006005.3(WFS1):c.1944G>A (p.Trp648Ter) WFS1 Oct 01, 1998 MedGen:C0043207,OMIM:222300,Orphanet:ORPHA3463,SNOMED CT:70694009 Diabetes mellitus AND insipidus with optic atrophy AND deafness germline 4 6301739 GTGGCTCACGGCCATCGTGCTGTTCTGCTGGTTCTATGTGTACCGCTCAGAGGGCATGAAG 142859694 244032 NM_033116.5(NEK9):c.2042G>A (p.Arg681His) NEK9 Jul 07, 2016 MedGen:C3280309,OMIM:614262 Arthrogryposis, perthes disease, and upward gaze palsy germline 14 75097231 TTTTTGCCTGGGGCAATGGTGGTAATGGCCGCCTGGCAATGACCCCCACAGAGAGACCACA 1057520815 372536 NM_000785.3(CYP27B1):c.305G>A (p.Gly102Glu) CYP27B1 Jan 26, 2017 MedGen:CN517202 not provided germline 12 57766088 CACTCGTCGAGGAGCTGCTGCGACAGGAGGGACCCCGGCCCGAGCGCTGCAGCTTCTCGCC 1021330566 445541 NM_001083614.1(EARS2):c.320G>A (p.Arg107His) EARS2 Dec 09, 2017 MedGen:C3554079,OMIM:614924,Orphanet:ORPHA314051;MedGen:CN517202 Combined oxidative phosphorylation deficiency 12;not provided germline 16 23544679 TTCCAGGCATCCCGCCTGATGAGAGCCCCCGCCGGGGCGGTCCTGCTGGGCCCTACCAGCA 587784049 168323 NM_133433.3(NIPBL):c.772-1G>A NIPBL Feb 08, 2013 MedGen:CN029798,OMIM:122470 Cornelia de Lange syndrome 1 germline 5 36971944 TCAAAAGATAAATTGTATACTCTATTTTTAGGATGGAGATTCTTCAACAATGAGGAATGCT -1 438514 NM_006014.4(LAGE3):c.188+1G>A LAGE3 Oct 25, 2017 MedGen:CN570502,OMIM:301006 GALLOWAY-MOWAT SYNDROME 2, X-LINKED germline X 154478727 CAGGGGGTCACGAATGCGGCCGCACATATTGTATCCTTTCCGAGCTGGGGGCTGCTTGCGG 886039567 259986 NM_207122.1(EXT2):c.743+1G>A EXT2 Mar 09, 2016 MedGen:CN517202 not provided germline 11 44114302 TGAGGTGGATCTTCCAGAGAAAGGACCAGGGTAAGGTACATTCATCCCAGCCAGGTGTGCC 121918210 16103 NM_018122.4(DARS2):c.536G>A (p.Arg179His) DARS2 Apr 01, 2007 MedGen:C1970180,OMIM:611105,Orphanet:ORPHA137898 Leukoencephalopathy with Brainstem and Spinal Cord Involvement and Lactate Elevation germline 1 173833419 TTCGGTTGCAGTATCGCTACTTAGACTTGCGTAGTTTCCAAATGCAGTATAACCTGCGACT 863225318 214692 NM_000038.5(APC):c.1658G>A (p.Trp553Ter) APC Oct 18, 2016 MedGen:C2713442,OMIM:175100;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Familial adenomatous polyposis 1;Hereditary cancer-predisposing syndrome;not provided germline;unknown 5 112828887 TTATTGCGAGTGTTTTGAGGAATTTGTCTTGGCGAGCAGATGTAAATAGTAAAAAGACGTT 193922236 44783 NM_000138.4(FBN1):c.7806G>A (p.Trp2602Ter) FBN1 Nov 27, 2012 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:CN517202 Marfan syndrome;not provided germline 15 48420700 CCCCCAGGGCTACCTCCAGCACTACCAGTGGAACCAGTGTGTTGGCAAGTAACTTTTCCTC 587777142 106542 NM_024790.6(CSPP1):c.2953+1G>A CSPP1 Feb 23, 2015 MedGen:C3810212,OMIM:615636 Joubert syndrome 21 germline;unknown 8 67172556 TTCATGATTTTAATGAGCTGAAAGATAGAGGTGAGTAGATTGCTGCTCTTTTAAAGATGTA 587784202 168276 NM_022455.4(NSD1):c.6476G>A (p.Cys2159Tyr) NSD1 Feb 08, 2013 MedGen:CN035106,OMIM:117550 Sotos syndrome 1 germline 5 177293844 TTACTTCTGTGTTTTCAGGGAAATGGGAATGTCCGTGGCATCAGTGTGACATCTGCGGGAA 376230356 76774 NM_000784.3(CYP27A1):c.380G>A (p.Arg127Gln) CYP27A1 Aug 01, 2013 MedGen:C0238052,OMIM:213700,Orphanet:ORPHA909,SNOMED CT:63246000 Cholestanol storage disease not provided 2 218809701 TGATGCGGCAAGAGGGCAAGTACCCAGTACGGAACGACATGGAGCTATGGAAGGAGCACCG 587784290 169378 NM_000430.3(PAFAH1B1):c.900+1G>A PAFAH1B1 Feb 08, 2013 MedGen:C1843916,OMIM:607432 Lissencephaly 1 germline 17 2674289 TCCTCCATCTCTGAAGCAACAGGATCTGAGGTACTGTATATACAAATGTCTTCATGGTTTT -1 444148 NM_000535.6(PMS2):c.3G>A (p.Met1Ile) PMS2 Jul 27, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0009405,Orphanet:ORPHA443090;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Hereditary nonpolyposis colon cancer;not provided germline 7 6009017 TCCCCGAGGCGGATCGGGTGTTGCATCCATGGAGCGAGCTGAGAGCTCGAGGTGAGCGGGG 1064792876 224787 NM_001953.4(TYMP):c.928+1G>A TYMP Jan 14, 2016 MedGen:C0872218,OMIM:603041,Orphanet:ORPHA298 Mitochondrial DNA depletion syndrome 1 (MNGIE type) germline 22 50526575 CAGACTTAAGGGACCTGGTCACCACGCTCGGTGAGGGGGACGGGGTGTAGGGGAGCGGAGG 864622501 221768 NM_018972.2(GDAP1):c.579+1G>A GDAP1 Sep 26, 2015 MedGen:C1859198,OMIM:214400,Orphanet:ORPHA99948 Charcot-Marie-Tooth disease, type 4A germline 8 74361979 GCATACATTGCAAAACAGAAACGACTTAAAGTAAGCCAATCAGCTGTCCTCAGTTGACATA 180177162 200431 NM_000030.2(AGXT):c.107G>A (p.Arg36His) AGXT Nov 27, 2014 MedGen:C0268164,OMIM:259900,Orphanet:ORPHA93598,SNOMED CT:65520001 Primary hyperoxaluria, type I germline 2 240868972 TGGGGCCTGGTCCTTCCAACCTGCCTCCTCGCATCATGGCAGCCGGGGGGCTGCAGATGAT 1057519349 362105 NM_182476.2(COQ6):c.564G>A (p.Trp188Ter) COQ6 Jun 07, 2016 MedGen:C3553349,OMIM:614650,Orphanet:ORPHA280406 Coenzyme Q10 deficiency, primary, 6 germline 14 73958229 TCCATTTCCTATGGCCGACTCCAGCCCTTGGGTTCATATTACCCTAGGTGATGGCAGCACC 760235677 236233 NM_058216.2(RAD51C):c.837+1G>A RAD51C Mar 03, 2015 MedGen:C3150659,OMIM:613399;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 3;Hereditary cancer-predisposing syndrome germline 17 58709991 ATCAGCCTTGCAAATAATCACAGATTAGCTGTAAGTATTAACTAGTGAAGAGAGTTTTATA 727503809 177363 NM_000046.3(ARSB):c.944G>A (p.Arg315Gln) ARSB Feb 14, 2014 MedGen:CN517202 not provided germline 5 78885782 CTTTGGCAGGGGGTAATAACTGGCCCCTTCGAGGAAGAAAATGGAGCCTGTGGGAAGGAGG 1085307556 415619 NM_001128849.1(SMARCA4):c.3556G>A (p.Ala1186Thr) SMARCA4 Apr 20, 2017 MedGen:CN517202 not provided germline 19 11033299 GACTGGCACCTCTTCCCCCAGGACCTGCAAGCGCAGGACCGAGCCCACCGCATCGGGCAGC -1 447730 NM_006147.3(IRF6):c.749G>A (p.Arg250Gln) IRF6 Mar 16, 2017 MedGen:C0175697,OMIM:119300,SNOMED CT:79261008 Van der Woude syndrome germline 1 209790806 CCATGACCGTGAGCAACCCTCAGGGCTGCCGACTCTTCTATGGGGACCTGGGTCCCATGCC 869312826 226495 NM_002074.4(GNB1):c.976G>A (p.Ala326Thr) GNB1 Feb 10, 2016 Human Phenotype Ontology:HP:0002069,MedGen:C0494475;Human Phenotype Ontology:HP:0001263,MedGen:C4020875;Human Phenotype Ontology:HP:0001249,MedGen:C1843367;Human Phenotype Ontology:HP:0001252,MedGen:C0026827;Human Phenotype Ontology:HP:0001250,MedGen:C0036572 Generalized tonic-clonic seizures;Global developmental delay;Intellectual disability;Muscular hypotonia;Seizures de novo 1 1787378 AGCTGCCTGGGCGTGACTGACGATGGCATGGCTGTGGCGACAGGGTCCTGGGATAGCTTCC 587783757 170028 NM_000252.2(MTM1):c.1137G>A (p.Trp379Ter) MTM1 Feb 08, 2013 MedGen:C0410203,OMIM:310400,Orphanet:ORPHA596,SNOMED CT:46804001 Severe X-linked myotubular myopathy germline X 150657904 TTCAGTGCTTGTGCATTGCAGTGACGGATGGGACAGGACTGCTCAGCTGACATCCTTGGCC 28935195 25766 NM_000169.2(GLA):c.466G>A (p.Ala156Thr) GLA Oct 17, 2016 Human Phenotype Ontology:HP:0001071,MedGen:C0002986,OMIM:301500,Orphanet:ORPHA324,SNOMED CT:16652001 Fabry disease germline X 101401713 CCTGGGAGTTTTGGATACTACGACATTGATGCCCAGACCTTTGCTGACTGGGGAGTAGATC 587776405 153708 NM_024675.3(PALB2):c.48G>A (p.Lys16=) PALB2 Sep 15, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline 16 23641110 GAAGCCCCTCAGCTGTGAGGAGAAGGAAAAGGTGCCGGGGGTGCGGGAAGGGCGGACGCAG 587779625 107095 NM_000090.3(COL3A1):c.709G>A (p.Gly237Arg) COL3A1 Aug 26, 2016 MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000;MedGen:CN517202 Ehlers-Danlos syndrome, type 4;not provided germline 2 188990114 TTCTCTACCTAGGGAGAATCAGGTAGACCCGGACGACCTGGAGAGCGAGGATTGCCTGGAC 121917900 16739 NM_000124.3(ERCC6):c.1550G>A (p.Trp517Ter) ERCC6 Jan 01, 1998 MedGen:C0751038,OMIM:133540,Orphanet:ORPHA90322 Cockayne syndrome B germline 10 49500673 GTCATAGGTACCAGCAGACAGGTGTTAGGTGGCTGTGGGAATTGCACTGCCAGCAGGCAGG 397514375 36363 NM_000060.4(BTD):c.595G>A (p.Val199Met) BTD Sep 16, 2016 MedGen:C0220754,OMIM:253260,Orphanet:ORPHA79241,SNOMED CT:8808004 Biotinidase deficiency unknown 3 15644451 GATGGGAGATACCAGTTCAACACAAATGTCGTGTTCAGCAATAATGGAACCCTTGTTGACC 201752283 106628 NM_000211.4(ITGB2):c.897+1G>A ITGB2 - MedGen:C0398738,OMIM:116920,Orphanet:ORPHA99842 Leukocyte adhesion deficiency type 1 inherited 21 44900319 GACAACTTGTACAAGAGGAGCAACGAATTCGTAAGTCCCCACCCCAGGCACCCAGGCACCG 1085307271 414212 NM_001204.6(BMPR2):c.893G>A (p.W298*) BMPR2 - MedGen:C0152171,OMIM:178600,SNOMED CT:26174007 Primary pulmonary hypertension germline 2 202520127 GCAAGTATTTAAGTCTCCACACAAGTGACTGGGTAAGCTCTTGCCGTCTTGCTCATTCTGT -1 430082 NM_173630.3(RTTN):c.5185+1G>A RTTN May 17, 2016 na MICROCEPHALY, SHORT STATURE, AND POLYMICROGYRIA WITH SEIZURES germline 18 70054130 TTCTCACCATATGTACCAAAGATGTATTAGGTAAGCTTAATTGTTTTAGTTTAGAATGTAA 267606907 29186 NM_002471.3(MYH6):c.2384G>A (p.Arg795Gln) MYH6 Jan 29, 2002 MedGen:C2750467,OMIM:613251 Familial hypertrophic cardiomyopathy 14 germline 14 23396329 GCATCATCACGCGCATGCAGGCCCAAGCCCGGGGCCAGCTCATGCGCATTGAGTTCAAGAA -1 442108 NM_000435.2(NOTCH3):c.3356G>A (p.Cys1119Tyr) NOTCH3 Nov 25, 2014 MedGen:CN517202 not provided germline 19 15179468 AGTGTCTTCCTGGCTACAATGGTGATAACTGTGAGGACGACGTGGACGAGTGTGCCTCCCA 61752119 28744 NM_001079867.1(PEX2):c.163G>A (p.Glu55Lys) PEX2 Oct 01, 1999 MedGen:C3542026,OMIM:614867 Peroxisome biogenesis disorder 5B germline 8 76984016 AAACCTGGGCTGTTAGCTCGCTTTGAGCCAGAGGTGAAAGCGTGCTTATGGGTTTTCTTGT -1 442564 NM_144612.6(LOXHD1):c.746G>A (p.Trp249Ter) LOXHD1 Jul 30, 2015 MedGen:C0011053 Deafness paternal 18 46610789 GCCACAACAATAAGGGGGGCTCTGCAGGTTGGTTCCTGTCCCAGGTGAGTTCAGCTGCTTC 81002809 67078 NM_000059.3(BRCA2):c.7805+1G>A BRCA2 Nov 01, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome germline 13 32357930 TGGAAAGGCTGGAAAAGAAGAATTTTATAGGTACTCTATGCAAAAAGATTGTGTGTTAACT 1057524736 370991 NM_004523.3(KIF11):c.77+1G>A KIF11 Jan 13, 2017 MedGen:CN517202 not provided germline 10 92593453 GAAGAACATCCAGGTGGTGGTGAGATGCAGGTAGGGAGAGGGCTGACAGGATTCCGAGCGC 727503881 177629 NM_080629.2(COL11A1):c.3745-1G>A COL11A1 Feb 25, 2014 MedGen:CN517202 not provided germline 1 102920365 GGATAATTACATTCCTTTTTCTACACTGCAGGGACCACAAGGACCCCCAGGGTCTGTTGGT 398123006 97553 NM_024915.3(GRHL2):c.1258-1G>A GRHL2 Aug 01, 2013 MedGen:C1837640,OMIM:608641 Deafness, autosomal dominant 28 germline 8 101631636 GCATTTTCTGTATTTGTTTTTTTCCTATCAGGGAGCAGAAAGAAAAATCCGAGATGAAGAG 587782604 152351 NM_003000.2(SDHB):c.689G>A (p.Arg230His) SDHB Aug 07, 2017 MedGen:C1708353,Orphanet:ORPHA29072;MedGen:C0027672,SNOMED CT:699346009;MedGen:C1861848,OMIM:115310;MedGen:CN517202 Hereditary Paraganglioma-Pheochromocytoma Syndromes;Hereditary cancer-predisposing syndrome;Paragangliomas 4;not provided germline 1 17022684 TTGACTCCAGAGATGACTTCACAGAGGAGCGCCTGGCCAAGCTGCAGGACCCATTCTCTCT 387906806 39143 NM_005630.2(SLCO2A1):c.764G>A (p.Gly255Glu) SLCO2A1 Jan 13, 2012 MedGen:C3280800,OMIM:614441 Primary hypertrophic osteoarthropathy, autosomal recessive 2 germline 3 133951305 ACTTGGTCCCGGGTGACCCCCGATGGATTGGAGCCTGGTGGCTAGGCCTGCTCATTTCTTC 886041412 263955 NM_004431.4(EPHA2):c.2826-9G>A EPHA2 Jul 18, 2016 MedGen:CN517202 not provided germline 1 16125329 CCAGCCCCTAACTCTCCCTCTCTCCCTCCCGGCCCACAGCGACATCAAGAGGATTGGGGTG 886039359 259944 NM_000043.5(FAS):c.443+1G>A FAS Oct 28, 2016 MedGen:CN517202 not provided germline 10 89008998 TGTATGTGAACACTGTGACCCTTGCACCAAGTAAGTTTTAGTCTTTCTCTGATTAAAACAC 112563513 136921 NM_000540.2(RYR1):c.7007G>A (p.Arg2336His) RYR1 Oct 21, 2016 MedGen:CN239331;MedGen:CN517202 RYR1-Related Disorders;not provided germline;unknown 19 38499223 GTGGTGGAGAGCGCTACCTGGACTTCCTGCGCTTTGCTGTCTTCGTCAACGGTGAGGAGGG 587776962 59490 NM_001042498.2(SLC35A2):c.3G>A (p.Met1Ile) SLC35A2 Nov 14, 2013 MedGen:C3806688,OMIM:300896,Orphanet:ORPHA356961 CONGENITAL DISORDER OF GLYCOSYLATION, TYPE IIm de novo;germline X 48911634 CGAGGGGACGGGCCGGGCAGATGCCAACATGGCAGCGGTTGGGGCTGGTGGTTCCACCGCG 143816093 15271 NM_182758.3(WDR72):c.2934G>A (p.Trp978Ter) WDR72 Dec 15, 2016 MedGen:C2750771,OMIM:613211;MedGen:CN517202 Amelogenesis imperfecta, hypomaturation type, IIA3;not provided germline 15 53609531 CCTTTCACTTTTGAAGCTAATTTCCTGTTGGAGAGACCAGTCTGTGCAGGTATGATATAAT 144172724 171199 NM_000527.4(LDLR):c.301G>A (p.Glu101Lys) LDLR Sep 07, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000;MedGen:C0020443;MedGen:CN517202 Familial hypercholesterolemia;Hypercholesterolaemia;not provided germline;not applicable 19 11102774 GGCCAAGTGGACTGCGACAACGGCTCAGACGAGCAAGGCTGTCGTAAGTGTGGCCCTGCCT 113994203 34027 NM_000430.3(PAFAH1B1):c.1002+1G>A PAFAH1B1 Feb 08, 2013 MedGen:C1843916,OMIM:607432 Lissencephaly 1 germline 17 2676607 GTCAGTACTGGCATGTGCCTTATGACCCTCGTAAGTTTGCATAATCTTACCATTTCTTTTG 1057517822 359361 NM_006516.2(SLC2A1):c.418G>A (p.Val140Met) SLC2A1 Mar 11, 2015 MedGen:CN517202 not provided germline 1 42930724 GGTGTGTACTGCGGCCTGACCACAGGCTTCGTGCCCATGTATGTGGGTGAAGTGTCACCCA 104894677 31755 NM_001985.2(ETFB):c.491G>A (p.Arg164Gln) ETFB Mar 01, 1994 MedGen:C3278155 Glutaric acidemia IIB germline 19 51347006 CGCTGGAGGGGGACAAGTTGAAAGTGGAGCGGGAGATCGATGGGGGCCTGGAGACCCTGCG 587779494 106935 NM_000090.3(COL3A1):c.2555G>A (p.Gly852Asp) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189003412 CTTACATAATTTCCTTCCATTTCATATAGGGTCCTCCTGGTCCCCAAGGTGTCAAAGGTGA 587783595 169461 NM_001005360.2(DNM2):c.1565G>A (p.Arg522His) DNM2 Jun 29, 2017 MedGen:C1847902,OMIM:606482;MedGen:CN221282;MedGen:CN517202 DNM2-related intermediate Charcot-Marie-Tooth neuropathy;Myopathy, centronuclear;not provided germline 19 10812271 CTAAGCTGCGCGCTTTCCCCCAGGTGATCCGCAGGGGCTGGCTGACCATCAACAACATCAG 794728598 481568 NM_170707.3(LMNA):c.3G>A (p.Met1Ile) LMNA Oct 24, 2017 MedGen:CN517202 not provided germline 1 156114921 CGCGGGCAGCGCTGCCAACCTGCCGGCCATGGAGACCCCGTCCCAGCGGCGCGCCACCCGC 121434370 17125 NM_000159.3(GCDH):c.1093G>A (p.Glu365Lys) GCDH Jul 07, 2014 MedGen:C0268595,OMIM:231670,Orphanet:ORPHA25,SNOMED CT:360416003,SNOMED CT:76175005;MedGen:CN517202 Glutaric aciduria, type 1;not provided germline 19 12897713 CCCTCATGTGCCACTCCCAGGGCTGCCCCCGAGATGGTTTCTCTGCTGAAGAGGAATAACT 886043669 271844 NM_016363.5(GP6):c.479G>A (p.Trp160Ter) GP6 May 02, 2016 MedGen:C3280120,OMIM:614201,Orphanet:ORPHA98885 Platelet-type bleeding disorder 11 germline 19 55027709 ACCCTGCGCCCTACAAGAATCCCGAGAGATGGTACAGGGCTAGTTTTCCCATCATCACGGT 104893965 32030 NM_000165.4(GJA1):c.1127G>A (p.Arg376Gln) GJA1 Aug 08, 2001 MedGen:C0344783,OMIM:600309,SNOMED CT:253414002;MedGen:CN031062,OMIM:241550 Atrioventricular septal defect and common atrioventricular junction;Hypoplastic left heart syndrome 1 germline 6 121447974 GAGCCAGCAGTCGTGCCAGCAGCAGACCTCGGCCTGATGACCTGGAGATCTAGATACAGGC -1 434438 NM_172250.2(MMAA):c.820-1G>A MMAA - MedGen:C1855109,OMIM:251100,Orphanet:ORPHA79310 Methylmalonic aciduria cblA type germline 4 145653993 GGTTGTCATTAAATGTTTCTGATCTCTTTAGGGTATCAAAAGGGGTATAATCGAGATGGCA 397514456 38702 NM_001077488.3(GNAS):c.1177G>A (p.Glu393Lys) GNAS Mar 10, 2015 Human Phenotype Ontology:HP:0000852,MedGen:C0033806,OMIM:103580,Orphanet:ORPHA97593;MedGen:C2675910,OMIM:612462;MedGen:C0033835,OMIM:612463,Orphanet:ORPHA79445,SNOMED CT:237659007 Pseudohypoparathyroidism type 1A;Pseudohypoparathyroidism type 1C;Pseudopseudohypoparathyroidism germline 20 58910818 ATCATTCAGCGCATGCACCTTCGTCAGTACGAGCTGCTCTAAGAAGGGAACCCCCAAATTT 267607634 77669 NM_170707.3(LMNA):c.1081G>A (p.Glu361Lys) LMNA Feb 08, 2013 MeSH:D009136,MedGen:C0026850,Orphanet:ORPHA98473;MedGen:CN517202 Muscular dystrophy;not provided germline 1 156136045 AGGATGCAGCAGCAGCTGGACGAGTACCAGGAGCTTCTGGACATCAAGCTGGCCCTGGACA 58933950 25556 NM_000273.2(GPR143):c.455G>A (p.Ser152Asn) GPR143 Apr 01, 1998 MedGen:C0342684,OMIM:300500,Orphanet:ORPHA54,SNOMED CT:78642008;MedGen:CN517202 Ocular albinism, type I;not provided germline X 9759332 ATCTGGTGATCCGGAGATCGGCAGGACTGAGGTATTCACCGAGGAAATGGGATTTCTGCCC 61751262 105081 NM_000350.2(ABCA4):c.3050+5G>A ABCA4 Jul 25, 2017 MedGen:CN517202 not provided germline 1 94044608 CCACAGCACAACATCCTGTTCCACCAGTAAGCGACACAGGAACTGAGACCGCCCCATCCCC 879255709 247726 NM_014191.3(SCN8A):c.4948G>A (p.Ala1650Thr) SCN8A Nov 16, 2016 MedGen:C3281191,OMIM:614558;Human Phenotype Ontology:HP:0200134,MedGen:C0543888;MedGen:CN517202 Early infantile epileptic encephalopathy 13;Epileptic encephalopathy;not provided de novo;germline 12 51806434 CTGCTCTTTGCCTTAATGATGTCCTTGCCTGCCCTGTTCAACATCGGCCTTCTGCTCTTCC 121917957 79394 NM_006920.4(SCN1A):c.1130G>A (p.Arg377Gln) SCN1A Jan 16, 2017 MedGen:C1858672,OMIM:604233;MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002;MedGen:CN517202 Generalized epilepsy with febrile seizures plus, type 1;Severe myoclonic epilepsy in infancy;not provided germline;inherited;unknown 2 166047667 CCTTCAGTTGGGCTTTTTTGTCCTTGTTTCGACTAATGACTCAGGACTTCTGGGAAAATCT 879255212 246622 NM_000527.4(LDLR):c.2438G>A (p.Trp813Ter) LDLR Mar 25, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11129561 GCCTGGGGGTCTTCCTTCTATGGAAGAACTGGCGGCTTAAGAACATCAACAGCATCAACTT 1057519305 361823 NM_001128608.1(MAPKBP1):c.1631G>A (p.Arg544Gln) MAPKBP1 May 22, 2017 MedGen:CN781300,OMIM:617271 Nephronophthisis 20 germline 15 41816937 CAGGTCTGAAACTGCTAGCATCGGCGAGCCGGGACCGGCTGATCCATGTGCTGGATGCCGG 1057519699 362779 NM_006218.3(PIK3CA):c.1645G>A (p.Asp549Asn) PIK3CA Oct 02, 2014 MeSH:D015179,MedGen:CN236642;Human Phenotype Ontology:HP:0100013,MeSH:D001943,MedGen:C1458155,Orphanet:ORPHA180250,SNOMED CT:126926005 Colorectal Neoplasms;Neoplasm of the breast somatic 3 179218315 CCTCTCTCTGAAATCACTGAGCAGGAGAAAGATTTTCTATGGAGTCACAGGTAAGTGCTAA 72664281 427068 NM_001171.5(ABCC6):c.549G>A (p.Leu183=) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16214375 CCTGTCTCTGGTGGTGGCACAGTTTGTGCTGTCCTGCCTGGCGGATCAACCCCCCTTCTTC 777061964 481361 NM_017613.3(DONSON):c.683G>A (p.Trp228Ter) DONSON Nov 16, 2017 MedGen:CN373593,OMIM:617604 MICROCEPHALY, SHORT STATURE, AND LIMB ABNORMALITIES maternal 21 33584692 TTATCTATTGGCTCCACCCTGCTTTGTCTTGGCTACCACTGTTCCCTCGTATTGGAGCTGA 80358231 16880 NM_206898.1(MRAP):c.3G>A (p.Met1Ile) MRAP Sep 30, 2017 MedGen:C4049650,OMIM:202200;Gene:282631,MedGen:C4049714,OMIM:607398 ACTH resistance;Glucocorticoid deficiency 2 germline 21 32298974 CGGACGCTGACTGCCCAGTGCCACAGACATGGCCAACGGGACCAACGCCTCTGCCCCATAC 756614404 214533 NM_001039550.1(DNAJB2):c.352+1G>A DNAJB2 Aug 08, 2014 MedGen:C3553989,OMIM:614881,Orphanet:ORPHA314485 Spinal muscular atrophy, distal, autosomal recessive, 5 germline 2 219282062 GGAGTGGAGACCCTTTTGCAGAGCTCTTTGGTGAGTGGACTCTGGAAGCCTCTGAATGGCT 121913645 29151 NM_000257.3(MYH7):c.667G>A (p.Ala223Thr) MYH7 Oct 18, 2002 MedGen:C1834481,OMIM:613426 Dilated cardiomyopathy 1S germline 14 23431650 CAGGGCACCCTGGAGGACCAGATCATCCAGGCCAACCCTGCTCTGGAGGCCTTTGGCAATG 797044598 188227 NM_000257.3(MYH7):c.5566G>A (p.Glu1856Lys) MYH7 Mar 12, 2015 MedGen:CN074249,OMIM:160500,Orphanet:ORPHA59135 Myopathy, distal, 1 germline 14 23414096 CCCTGCCTACCCTCTGGCCCCCAGACGGAGGAGGACAGGAAAAACCTGCTGCGGCTGCAGG 2856597 427079 NM_001171.5(ABCC6):c.232G>A (p.Ala78Thr) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16219935 CTAAGCCTGTATCCTCAGGTGCTTGGATTCGCCCTCATAGTCCTGTGTACCTCCAGCGTGG 869312146 214038 NM_000169.2(GLA):c.561G>A (p.Met187Ile) GLA Jan 01, 2014 MedGen:CN233149;Human Phenotype Ontology:HP:0001071,MedGen:C0002986,OMIM:301500,Orphanet:ORPHA324,SNOMED CT:16652001 Deoxygalactonojirimycin response;Fabry disease inherited X 101400744 ATTGTTTTCTCATACAGGTTATAAGCACATGTCCTTGGCCCTGAATAGGACTGGCAGAAGC 104894832 25761 NM_000169.2(GLA):c.982G>A (p.Gly328Arg) GLA Apr 01, 1992 Human Phenotype Ontology:HP:0001071,MedGen:C0002986,OMIM:301500,Orphanet:ORPHA324,SNOMED CT:16652001 Fabry disease germline X 101398387 GCCATCAATCAGGACCCCTTGGGCAAGCAAGGGTACCAGCTTAGACAGGTAAATAAGAGTA 72656390 458058 NM_000089.3(COL1A2):c.920G>A (p.Gly307Asp) COL1A2 Oct 11, 2016 MedGen:C0268335,OMIM:130000,Orphanet:ORPHA287,SNOMED CT:20766005,SNOMED CT:83470009;MedGen:C0023931,OMIM:166200,SNOMED CT:385482004 Ehlers-Danlos syndrome, classic type;Osteogenesis imperfecta type I germline 7 94409592 AGGGTAATCCTGGAGCAAACGGCCTTACTGGTGCCAAGGGTGCTGCTGTGAGTATACCTGC 764497513 274181 NM_020549.4(CHAT):c.620G>A (p.Arg207His) CHAT Aug 16, 2016 MedGen:C0393929,OMIM:254210,SNOMED CT:230670003 Familial infantile myasthenia germline 10 49620535 ACTGGCTGAATGACATGTATCTCAACAACCGCCTGGCCCTGCCTGTCAACTCCAGCCCTGC 763486732 214189 NM_001080522.2(CC2D2A):c.3989G>A (p.Arg1330Gln) CC2D2A Feb 23, 2015 MedGen:C2676788,OMIM:612285 Joubert syndrome 9 unknown 4 15586170 TCATTTTGATTATACAGGAACTGGTGGCTCGATATGTGTCCTTGATTCCCTTCTTGCCTGA 61754457 153266 NM_004992.3(MECP2):c.317G>A (p.Arg106Gln) MECP2 Nov 01, 2011 MedGen:C0035372,OMIM:312750,Orphanet:ORPHA778,SNOMED CT:68618008 Rett syndrome de novo;germline;unknown X 154032267 ATGACCCCACCCTGCCTGAAGGCTGGACACGGAAGCTTAAGCAAAGGAAATCTGGCCGCTC 267606827 28910 NM_005249.4(FOXG1):c.924G>A (p.Trp308Ter) FOXG1 Jul 13, 2010 MedGen:C3150705,OMIM:613454 Rett syndrome, congenital variant de novo;germline 14 28768203 CTTCATGGACCGCGCCGGCTCCCTCTACTGGCCCATGTCGCCCTTCCTGTCCCTGCACCAC 121909025 22218 NM_000492.3(CFTR):c.171G>A (p.Trp57Ter) CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline 7 117509040 GTCCCACTTTTTATTCTTTTGCAGAGAATGGGATAGAGAGCTGGCTTCAAAGAAAAATCCT 121434250 18384 NM_000348.3(SRD5A2):c.586G>A (p.Gly196Ser) SRD5A2 Mar 13, 2017 MedGen:C0268297,OMIM:264600,Orphanet:ORPHA753,SNOMED CT:57514000 3-Oxo-5 alpha-steroid delta 4-dehydrogenase deficiency germline 2 31529419 TTTACGTATGTTTCTGGAGCCAATTTCCTCGGTGAGATCATTGAATGGATCGGCTATGCCC 63750331 31048 NM_002087.3(GRN):c.3G>A (p.Met1Ile) GRN Aug 24, 2006 MedGen:C1843792,OMIM:607485;MedGen:CN517202 Frontotemporal dementia, ubiquitin-positive;not provided germline 17 44349167 ACGTTCCTTGGTACTTTGCAGGCAGACCATGTGGACCCTGGTGAGCTGGGTGGCCTTAACA 796052953 201632 NM_001165963.1(SCN1A):c.265-1G>A SCN1A Dec 16, 2013 MedGen:CN517202 not provided germline 2 166058689 CATACTTCTATGTTGTGTTCCTGTCTTACAGACTTTTATAGTATTGAATAAAGGGAAGGCC 61751402 105177 NM_000350.2(ABCA4):c.4469G>A (p.Cys1490Tyr) ABCA4 Mar 31, 2016 Human Phenotype Ontology:HP:0000556,MedGen:C0854723,Orphanet:ORPHA71862,SNOMED CT:314407005;MeSH:C535804,MedGen:C1855465,OMIM:248200;MedGen:CN517202 Retinal dystrophy;Stargardt disease 1;not provided germline;unknown 1 94029515 CACAGGTCAACCCTTCACCATCCTGCAGGTGCAGCACCAGGGAGAAGCTCACCATGCTGCC 1057521927 364478 NM_021222.2(PRUNE1):c.88G>A (p.Asp30Asn) PRUNE1 Sep 19, 2017 Human Phenotype Ontology:HP:0012443,MedGen:C4021085;MedGen:CN243994,OMIM:617481;MedGen:CN517202 Abnormality of brain morphology;Neurodevelopmental disorder with microcephaly, hypotonia, and variable brain anomalies;not provided germline;inherited 1 151017860 GTTGTGCTGGGAAATGAAGCCTGTGATTTGGACTCCACAGTGTCTGCTCTTGCCCTGGCTT 886041851 264035 NM_001271208.1(NEB):c.11806-1G>A NEB Apr 07, 2017 MedGen:CN517202 not provided germline 2 151610867 TCCCCATGCCCCATGCCGCCCTGCCCTGTAGCATTTATACACAGAAGCTTGGGATGCTGAC 1085307317 414265 NM_001204.6(BMPR2):c.1241G>A (p.W414*) BMPR2 - MedGen:C0152171,OMIM:178600,SNOMED CT:26174007 Primary pulmonary hypertension germline 2 202532697 TAGACATGTATGCTCTTGGACTAATCTATTGGGAGATATTTATGAGATGTACAGACCTCTT 80358020 70329 NM_007294.3(BRCA1):c.671-1G>A BRCA1 Oct 02, 2015 MedGen:C2676676,OMIM:604370 Breast-ovarian cancer, familial 1 germline 17 43094861 TGAGTACCTTGTTATTTTTGTATATTTTCAGCTGCTTGTGAATTTTCTGAGACGGATGTAA 118192133 76842 NM_000540.2(RYR1):c.13900G>A (p.Glu4634Lys) RYR1 May 11, 2010 MedGen:C0751951,OMIM:117000,Orphanet:ORPHA597,SNOMED CT:43152001;MedGen:CN517202 Central core disease;not provided unknown 19 38572172 GAGGATGAGAACATGGTGTACTACTTCCTGGAGGAAAGCACAGGCTACATGGAACCCGCCC 80356988 46160 NM_007294.3(BRCA1):c.4675G>A (p.Glu1559Lys) BRCA1 May 16, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline 17 43074331 GAAACATCTTACTTGCCAAGGCAAGATCTAGGTAATATTTCATCTGCTGTATTGGAACAAA 786200877 18012 NM_000271.4(NPC1):c.3591+1G>A NPC1 Oct 07, 2014 MedGen:C3179455,OMIM:257220 Niemann-Pick disease type C1 germline;unknown 18 23534445 GAAGAGGCACTTGCCCACATGGGCAGCTCCGTGAGTACCCTGAGCAGGGCCACGCCGGCAG 587780113 133372 NM_004360.4(CDH1):c.1565+1G>A CDH1 Oct 04, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1708349,OMIM:137215,Orphanet:ORPHA26106;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Hereditary diffuse gastric cancer;not provided germline 16 68815760 GCCAGACACATTTATGGAACAGAAAATAACGTAAGTGTGAGGATTTTTCAACTGACTTGCA 111436401 226974 NM_000540.2(RYR1):c.10347+1G>A RYR1 Sep 08, 2017 MeSH:D030342,MedGen:C0950123;MedGen:CN517202 Inborn genetic diseases;not provided germline 19 38523116 GAGATCTTCATCTACTGGTCCAAGTCCCACGTGAGTGCCCACCCCAACCGCCCTCCCCACA -1 446588 NM_003639.4(IKBKG):c.188-1G>A IKBKG Dec 18, 2015 MedGen:CN517202 not provided germline X 154556164 AGCTCCCCTCCACTGTCCCCTCTGCCACCAGATGCCATCCGGCAGAGCAACCAGATTCTGC 80338925 34541 NM_024577.3(SH3TC2):c.1969G>A (p.Glu657Lys) SH3TC2 Oct 04, 2016 MedGen:C1866636,OMIM:601596,Orphanet:ORPHA99949;MedGen:CN043578 Charcot-Marie-Tooth disease, type 4C;Charcot-Marie-Tooth disease, type IV germline 5 149027763 GGCCGGCACGAGGAGGTCCTGCCCTTTGCCGAGCGCCTGCAGCTCCTCTCTGGACACCCTC 104894291 28185 NM_000448.2(RAG1):c.1187G>A (p.Arg396His) RAG1 May 29, 1998 MedGen:C1801959,OMIM:603554,Orphanet:ORPHA39041,SNOMED CT:307650006 Histiocytic medullary reticulosis germline 11 36574491 TTGTGCACATTAATAAAGGGGGCCGGCCCCGCCAACATCTTCTGTCGCTGACTCGGAGAGC 201108965 15237 NM_001173990.2(TMEM216):c.218G>A (p.Arg73His) TMEM216 Jul 01, 2010 MedGen:C1842577,OMIM:608091;MedGen:C1864148,OMIM:603194 Joubert syndrome 2;Meckel syndrome type 2 germline 11 61393965 TCCTCCTTTATCTTGGAATTGAAGTAATTCGCCTGTTTTTTGGTAAGTGTTGTCCAGAGAA 398123367 98844 NM_000426.3(LAMA2):c.112+1G>A LAMA2 Nov 23, 2014 MedGen:C1263858,OMIM:607855,Orphanet:ORPHA258,SNOMED CT:111503008 Merosin deficient congenital muscular dystrophy germline 6 128883358 AGCGGCAGTCACAGGCACATCAGCAAAGAGGTACAGTCGAGGCATGGGCTTGGGTTGCATC 118203982 16396 NM_001080.3(ALDH5A1):c.612G>A (p.Trp204Ter) ALDH5A1 Mar 22, 2016 MedGen:C0268631,OMIM:271980,Orphanet:ORPHA22,SNOMED CT:49748000;MedGen:CN517202 Succinate-semialdehyde dehydrogenase deficiency;not provided germline 6 24504871 CATACTTCCTCTGCTCTTCTAACCCCAGTGGAATTTCCCCAGTGCCATGATCACCCGGAAG 267607165 22006 NM_006086.3(TUBB3):c.1228G>A (p.Glu410Lys) TUBB3 Aug 12, 2016 MedGen:C3279670,OMIM:614039;MedGen:C2748801,OMIM:600638 Cortical dysplasia, complex, with other brain malformations 1;Fibrosis of extraocular muscles, congenital, 3a, with or without extraocular involvement de novo;germline 16 89935679 GGCGAGGGCATGGACGAGATGGAGTTCACCGAGGCCGAGAGCAACATGAACGACCTGGTGT 1057516099 354006 NM_172107.3(KCNQ2):c.901G>A (p.Gly301Ser) KCNQ2 Nov 16, 2016 MedGen:C3150986,OMIM:613720,Orphanet:ORPHA439218;Human Phenotype Ontology:HP:0200134,MedGen:C0543888 Early infantile epileptic encephalopathy 7;Epileptic encephalopathy de novo;germline 20 63439624 AGGCTCCTTGCGGCAACCTTCACCCTCATCGGTGTCTCCTTCTTCGCGCTGCCTGCAGTAA 886041402 264710 NM_024110.4(CARD14):c.349+1G>A CARD14 Mar 03, 2016 MedGen:CN517202 not provided germline 17 80182791 AGCCTGATGTTGACTTCAGTAACTTTAGCGGTGAGAGCTCCGACTTTGACGGTTTGGCAGG 121909274 23337 NM_139343.2(BIN1):c.451G>A (p.Asp151Asn) BIN1 Sep 01, 2007 MedGen:C0410204,OMIM:255200,Orphanet:ORPHA169186,SNOMED CT:240081004 Autosomal recessive centronuclear myopathy germline 2 127068992 GCCAAGCGGGGGCGCAAGCTGGTGGACTACGACAGTGCCCGGCACCACTACGAGTCCCTTC 74315316 21522 NM_024009.2(GJB3):c.35G>A (p.Gly12Asp) GJB3 Dec 01, 1998 MedGen:C0265961,OMIM:133200,Orphanet:ORPHA317,SNOMED CT:70041004 Erythrokeratodermia variabilis germline 1 34784797 ACTGGAAGACACTCCAGGCCCTACTGAGCGGTGTGAACAAGTACTCCACAGCGTTCGGGCG -1 431529 NM_022124.5(CDH23):c.6344G>A (p.Arg2115His) CDH23 Sep 26, 2017 MedGen:CN432550,OMIM:617540 PITUITARY ADENOMA 5, MULTIPLE TYPES germline 10 71793272 TCTACCGAATAGAAGCTGGGGCTCAGGACCGCTTCCTCATTCATCTGGTCACCGGGGTCAT 318240760 45884 NM_018117.11(WDR11):c.1303G>A (p.Ala435Thr) WDR11 Oct 08, 2010 MedGen:C3540450,OMIM:614858;MedGen:CN517202 Hypogonadotropic hypogonadism 14 with or without anosmia;not provided germline 10 120871178 TGTTATTTTTATTACAAATCAGGGCAAAGTGCAATTGCTGGGGAAGAACATCCCAGAGGTT 1131691217 421129 NM_177438.2(DICER1):c.1907+1G>A DICER1 Nov 02, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 14 95115666 AATCAACACGGCCATTGGACACATCAATAGGTATGGCATCATATCATTTGTGTGGAAAACC 104886139 35781 NM_000495.4(COL4A5):c.1735G>A (p.Gly579Arg) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108597524 CCAGGGCTTCCTGGTTTACCTGGCACTCCTGGACAGGATGGATTGCCAGGGCTTCCTGGCC 118192168 28023 NM_000540.2(RYR1):c.14545G>A (p.Val4849Ile) RYR1 Mar 06, 2017 MedGen:C4016368;Human Phenotype Ontology:HP:0003789,MedGen:C1850674,OMIM:255320,Orphanet:ORPHA98905;MedGen:CN517202 Central core disease, autosomal recessive;Minicore myopathy;not provided germline;unknown 19 38580403 GTGATGACCGTGGGCCTTCTGGCGGTGGTCGTCTACCTGTACACCGTGGTGGCCTTCAACT 1131691130 420776 NM_000267.3(NF1):c.1796G>A (p.Trp599Ter) NF1 Nov 23, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 17 31223518 AAATGCTTAGTAGCACAGAAATTCTCAAGTGGTTGCGGGAAATATTGATCTGCAGGAATAA 72651651 32328 NM_000088.3(COL1A1):c.2210G>A (p.Gly737Asp) COL1A1 Oct 03, 1997 MedGen:C0268360,OMIM:166210,SNOMED CT:86470003 Osteogenesis imperfecta, recessive perinatal lethal germline 17 50191408 AGGGAATGCCTGGTGAACGTGGTGCAGCTGGTCTTCCAGGGCCTAAGGGTGACAGAGTAAG 886039249 259336 NM_001242896.1(DEPDC5):c.484-1G>A DEPDC5 Apr 13, 2016 Gene:50987,MedGen:C1858477,OMIM:604364 Epilepsy, familial focal, with variable foci 1 germline 22 31783906 GCTTTTTAATACAATTGTGTTTTTATTTCAGGTGGTGTTTCGTTCTACGTCGGCTATGGTT 57358989 29659 NM_000526.4(KRT14):c.357G>A (p.Met119Ile) KRT14 Sep 01, 1997 MedGen:C0080333,OMIM:131800,Orphanet:ORPHA79400;MedGen:C1832926,OMIM:601001;MedGen:CN517202 Epidermolysis bullosa simplex, Cockayne-Touraine type;Epidermolysis bullosa simplex, autosomal recessive;not provided germline 17 41586478 GCTTCTGGTGGGCAGTGAGAAGGTGACCATGCAGAACCTCAATGACCGCCTGGCCTCCTAC 587777264 131953 NM_020822.2(KCNT1):c.862G>A (p.Gly288Ser) KCNT1 Sep 26, 2017 MedGen:C3554195,OMIM:614959;MedGen:CN517202 Early infantile epileptic encephalopathy 14;not provided germline 9 135759686 CCCCTCACTGCCAGGGGTTGCAGGACCTGCGGCATCCAGCACCTGGAGCGGGCGGGCGAGA 768720209 211503 NM_017547.3(FOXRED1):c.86-1G>A FOXRED1 Apr 14, 2014 MedGen:CN517202 not provided germline 11 126271436 TTGGCCCTCTGACCCTAACTACATCCCACAGACTGGGATGGAAAGGTGTCTGAGATTAAGA 786203385 184108 NM_002382.4(MAX):c.295+1G>A MAX Jan 25, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 14 65077912 AGCGGCAGAATGCTCTTCTGGAGCAGCAAGGTGAGCACCCGAGCTCGTGGGGCAGCTGGCC 72653178 32369 NM_000088.3(COL1A1):c.3118G>A (p.Gly1040Ser) COL1A1 Nov 01, 2012 MedGen:C0268362,OMIM:259420,Orphanet:ORPHA216812,SNOMED CT:385483009;MedGen:CN517202 Osteogenesis imperfecta type III;not provided germline;unknown 17 50188619 TCTCCCCGCCAGGGTGACCGTGGTGAGACCGGCCCCGCTGGACCCCCTGGTGCTCCTGGTG 886040936 262828 NM_000059.3(BRCA2):c.6938-1G>A BRCA2 Oct 02, 2015 MedGen:C2675520,OMIM:612555 Breast-ovarian cancer, familial 2 germline 13 32346826 TAATATGTAATATAAAATAATTGTTTCCTAGGCACAATAAAAGATCGAAGATTGTTTATGC 587784174 168247 NM_022455.4(NSD1):c.6014G>A (p.Arg2005Gln) NSD1 Apr 06, 2017 MedGen:CN035106,OMIM:117550;MedGen:CN517202 Sotos syndrome 1;not provided germline 5 177283791 ATGTGTAGCTTCTTTTGGAATTCTAGGACCGAATCATTGATGCTGGTCCCAAAGGAAACTA 118192135 76849 NM_000540.2(RYR1):c.13913G>A (p.Gly4638Asp) RYR1 May 11, 2010 MedGen:C0751951,OMIM:117000,Orphanet:ORPHA597,SNOMED CT:43152001;MedGen:CN517202 Central core disease;not provided unknown 19 38572185 TGGTGTACTACTTCCTGGAGGAAAGCACAGGCTACATGGAACCCGCCCTGCGGTGTCTGAG 782440692 209381 NM_002230.2(JUP):c.794G>A (p.Arg265His) JUP Oct 01, 2011 MedGen:C1832600,OMIM:601214,Orphanet:ORPHA34217 Naxos disease germline 17 41767494 TGTACCAGGAGGGCGCCAAGATGGCCGTGCGCCTGGCCGACGGGCTGCAAAAGATGGTGCC 587777238 125816 NM_198947.3(FAM111B):c.1883G>A (p.Ser628Asn) FAM111B May 05, 2016 MedGen:C3810325,OMIM:615704,Orphanet:ORPHA221043 Poikiloderma, hereditary fibrosing, with tendon contractures, myopathy, and pulmonary fibrosis germline 11 59125980 GTAATGTATACTGTATGTTTACCCAAAGAAGTTTCCTATCAGAGGTTTGGAACACACACAC -1 457571 NM_194456.1(KRIT1):c.990G>A (p.Trp330Ter) KRIT1 Mar 09, 2017 MedGen:C1861784,OMIM:116860 Cerebral cavernous malformation germline 7 92226682 TGTTTTTTGTTTGTTTGTTTTTTTATACAGGTATGGAAAAGTTGAGGCCACTCGCATATTG 104886250 36012 NM_000495.4(COL4A5):c.3694G>A (p.Gly1232Ser) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108668408 AAGGGCGAACCAGGCTTTCACGGTTTCCCTGGTGTGCAGGGTCCCCCAGGCCCTCCTGGTT 267606760 16791 NM_000787.3(DBH):c.301G>A (p.Val101Met) DBH Oct 29, 2015 MedGen:C0342687,OMIM:223360,Orphanet:ORPHA230;MedGen:C0342687,OMIM:223360,Orphanet:ORPHA230 Dopamine beta hydroxylase deficiency;Dopamine beta hydroxylase deficiency germline 9 133636672 GACCGTGGCGAGCTTGAGAACGCAGATCTCGTGGTGCTCTGGACCGATGGGGACACTGCCT 797045393 209296 NM_000052.6(ATP7A):c.4123+1G>A ATP7A Feb 08, 2013 MedGen:C0022716,OMIM:309400,Orphanet:ORPHA565,SNOMED CT:59178007 Menkes kinky-hair syndrome germline X 78043435 ATAATCTGGTTGGAATTCCCATAGCTGCTGGTATGTGACTCTTAACTAGTACTGCTTTTTC 587779567 107024 NM_000090.3(COL3A1):c.2833G>A (p.Gly945Ser) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189004266 AGTCTTCATTATCTGTATTAGGGAGCTCCAGGCCCACTTGGGATTGCTGGGATCACTGGAG 121908117 19224 NM_033629.4(TREX1):c.52G>A (p.Asp18Asn) TREX1 Apr 28, 2017 MedGen:C0796126,OMIM:225750;MedGen:C3150315;MedGen:C3277619,OMIM:610448,SNOMED CT:72470008;MedGen:CN517202 Aicardi Goutieres syndrome 1;Aicardi Goutieres syndrome 1, autosomal dominant;Chilblain lupus 1;not provided germline 3 48466707 CCGGGGCCCATGCAGACCCTCATCTTTTTCGACATGGAGGCCACTGGCTTGCCCTTCTCCC 200639270 377186 NM_000159.3(GCDH):c.395G>A (p.Arg132Gln) GCDH Jan 11, 2017 MedGen:C0268595,OMIM:231670,Orphanet:ORPHA25,SNOMED CT:360416003,SNOMED CT:76175005;MedGen:CN517202 Glutaric aciduria, type 1;not provided germline 19 12893543 CCTATGGGCTCCTGGCCCGAGAGCTGGAGCGGGTGGACAGTGGCTACAGGTCGGCGATGAG 587781506 150832 NM_000059.3(BRCA2):c.7877G>A (p.Trp2626Ter) BRCA2 Dec 30, 2016 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome germline 13 32362594 CTAGAATTTGGGTTTATAATCACTATAGATGGATCATATGGAAACTGGCAGCTATGGAATG 587777616 153655 NM_006831.2(CLP1):c.419G>A (p.Arg140His) CLP1 Apr 27, 2014 MedGen:C4014347,OMIM:615803,Orphanet:ORPHA411493 Pontocerebellar hypoplasia, type 10 germline;inherited 11 57659895 TGTGTCGCCTTCTGCTCAACTACGCAGTGCGTTTGGGCCGCCGTCCCACTTATGTGGAGCT 137853905 105638 NM_004183.3(BEST1):c.727G>A (p.Ala243Thr) BEST1 Sep 01, 2017 MedGen:CN517202 not provided germline 11 61958158 TCCTCCTCCTCCTCCCAGGTGGTGACTGTGGCGGTGTACAGCTTCTTCCTGACTTGTCTAG 199476107 24731 m.14453G>A MT-ND6 Oct 01, 2001 MedGen:C0162671,OMIM:540000,Orphanet:ORPHA550,SNOMED CT:39925003 Juvenile myopathy, encephalopathy, lactic acidosis AND stroke germline MT 14453 GACCCCCATGCCTCAGGATACTCCTCAATAGCCATCGCTGTAGTATATCCAAAGACAACCA 121912453 29815 NM_000454.4(SOD1):c.49G>A (p.Gly17Ser) SOD1 Jan 01, 1997 MedGen:C1862939,OMIM:105400 Amyotrophic lateral sclerosis type 1 germline 21 31659818 TGCGTGCTGAAGGGCGACGGCCCAGTGCAGGGCATCATCAATTTCGAGCAGAAGGCAAGGG 587783459 168638 NM_017780.3(CHD7):c.8055G>A (p.Trp2685Ter) CHD7 Feb 08, 2013 MedGen:C0265354,OMIM:214800,Orphanet:ORPHA138,SNOMED CT:47535005 CHARGE association germline 8 60862631 AAATCCTGAATTTGCAGTTGCTCCAGACTGGACTGATATAGTTAAGCAGTCTGTAAGTACA 387906931 39516 NM_006005.3(WFS1):c.2338G>A (p.Gly780Ser) WFS1 Jun 01, 2011 MedGen:C1857286,OMIM:614296,Orphanet:ORPHA411590 Wolfram-like syndrome, autosomal dominant germline 4 6302133 TTCGACCGCTACAAGTTTGAGATTACCGTGGGCATGCCATTCAGCAGCGGCGCTGACGGCT 387906937 39530 NM_012200.3(B3GAT3):c.830G>A (p.Arg277Gln) B3GAT3 Jun 04, 2015 na;MedGen:C1855536,OMIM:245600 MULTIPLE JOINT DISLOCATIONS, SHORT STATURE, AND CRANIOFACIAL DYSMORPHISM WITH CONGENITAL HEART DEFECTS;Multiple joint dislocations, short stature, craniofacial dysmorphism, and congenital heart defects germline 11 62616585 CCAATGCCCAATTTGATTCCACCGCTCCCCGGGGCCACCTGGAGAGCAGTCTTCTGAGCCA 63750561 95539 NM_000249.3(MLH1):c.2135G>A (p.Trp712Ter) MLH1 Dec 15, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Lynch syndrome;not provided germline;unknown 3 37050517 GTGAAGTGCCTGGCTCCATTCCAAACTCCTGGAAGTGGACTGTGGAACACATTGTCTATAA 527236113 152862 NM_014014.4(SNRNP200):c.2042G>A (p.Arg681His) SNRNP200 - Human Phenotype Ontology:HP:0000547,MeSH:D012174,MedGen:C0035334,OMIM:268000,Orphanet:ORPHA791,SNOMED CT:28835009 Retinitis pigmentosa not provided 2 96293090 ATTTGTCTAACTGTTGAACTTCTAGCTTCCGTCCAGTGCCTCTGGAACAGACATATGTGGG 121909198 22976 NM_000503.5(EYA1):c.1087G>A (p.Glu363Lys) EYA1 Feb 12, 2000 MedGen:C3152182 Anterior segment anomalies germline 8 71244656 CCCACTTCAGTTTCCCTTGGACTGCGAATGGAAGAAATGATTTTCAACTTGGCAGACACAC 1057519336 362066 NM_003995.3(NPR2):c.2944G>A (p.Asp982Asn) NPR2 Sep 16, 2016 MedGen:C1864356,OMIM:602875,Orphanet:ORPHA40 Acromesomelic dysplasia Maroteaux type inherited 9 35808811 CTGAAGATGCCCCGTTATTGTCTTTTTGGAGACACAGTGAACACTGCTTCTCGAATGGAGT 121909303 23207 NM_000436.3(OXCT1):c.661G>A (p.Val221Met) OXCT1 Sep 01, 2000 MedGen:C0342792,OMIM:245050,Orphanet:ORPHA832,SNOMED CT:238004006 Succinyl-CoA acetoacetate transferase deficiency germline 5 41842685 AAAGCCTGGAAGGCGGACCGAGCAGGAAACGTGATTTTCAGGTATTGTGATAGTTTTAAAA 121908047 18721 NM_000403.3(GALE):c.280G>A (p.Val94Met) GALE Jun 17, 2016 MedGen:C4017048;MedGen:C0751161,OMIM:230350,Orphanet:ORPHA79238,SNOMED CT:8849004 Galactose epimerase deficiency, severe;UDPglucose-4-epimerase deficiency germline;unknown 1 23798188 GCGGTCATCCACTTTGCGGGGCTCAAGGCCGTGGGCGAGTCGGTGCAGAAGCCTCTGGATT 1057520630 376667 NM_007254.3(PNKP):c.1386+1G>A PNKP Apr 16, 2015 MedGen:CN517202 not provided germline 19 49861607 ACTCTGGAGCAGGCGCGCCACAACAACCGGGTGAGCCCGCTCAGCCCGGACACCCCCCGGG 74315340 22998 NM_000261.1(MYOC):c.734G>A (p.Cys245Tyr) MYOC Jan 01, 2006 MedGen:C1842028,OMIM:137750 Primary open angle glaucoma juvenile onset 1 germline 1 171636706 CTTCGTTTTCTTTTCTGAATTTACCAGGATGTGGAGAACTAGTTTGGGTAGGAGAGCCTCT 199422249 47536 NM_001363.4(DKC1):c.1075G>A (p.Asp359Asn) DKC1 May 10, 2012 MedGen:C1148551,OMIM:305000 Dyskeratosis congenita X-linked not provided X 154773169 TTAATGACCACAGCGGTCATCTCTACCTGCGACCATGGTATAGTAGCCAAGATCAAGAGAG 138138689 357961 NM_153676.3(USH1C):c.496+1G>A USH1C Nov 02, 2016 MedGen:C1865870,OMIM:602092;MedGen:C1848604,OMIM:276904 Deafness, autosomal recessive 18;Usher syndrome, type 1C unknown 11 17527222 CCAAGAAAACTGTGTCCATCAAAGTGAGACGTGAGTGAGGCCAGAGCAGGGCAGTACTCCA 387907249 45606 NM_198253.2(TERT):c.2146G>A (p.Ala716Thr) TERT Nov 19, 2015 MedGen:C3553617,OMIM:614742 Pulmonary fibrosis and/or bone marrow failure, telomere-related, 1 germline 5 1278781 CCTCCACTCACACAGGTGGATGTGACGGGCGCGTACGACACCATCCCCCAGGACAGGCTCA 690016543 171812 NM_002972.3(SBF1):c.1327G>A (p.Asp443Asn) SBF1 Dec 22, 2014 MedGen:C0007959,Orphanet:ORPHA166,SNOMED CT:50548001;MedGen:C3695063,OMIM:615284,Orphanet:ORPHA363981 Charcot-Marie-Tooth disease;Charcot-Marie-Tooth disease, type 4B3 germline 22 50465006 GGGGTCCCATACCGCCCTACGGACCTGTTCGATGAGGTGCACCTCCACCCTGCCCTCCCAG 747768373 244490 NM_014845.5(FIG4):c.2459+1G>A FIG4 Nov 24, 2015 MedGen:CN517202 not provided germline 6 109792665 CTCAGAAGAAGATTTCTCCATTTATTCAAGGTGAGATACTTTCATGTAGATATTAAAGAAA 886041207 264349 NM_012330.3(KAT6B):c.3147G>A (p.Pro1049=) KAT6B Sep 14, 2016 MedGen:CN517202 not provided germline 10 75022006 ACAATCGAAAAATAAATATTTGCATTCCCCGGAGAGCCGGCCAGTCACAGGGGAGCGAGGG 104894091 22009 NM_002546.3(TNFRSF11B):c.260G>A (p.Cys87Tyr) TNFRSF11B Dec 01, 2003 MedGen:C0268414,OMIM:239000,Orphanet:ORPHA2801,SNOMED CT:9723006 Hyperphosphatasemia with bone disease germline 8 118933071 GTGACGAGTGTCTATACTGCAGCCCCGTGTGCAAGGAGCTGCAGTACGTCAAGCAGGAGTG 121909019 22197 NM_000492.3(CFTR):c.3197G>A (p.Arg1066His) CFTR Apr 14, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008;MedGen:CN169374 Cystic fibrosis;not specified germline 7 117611638 TTACAAGCTTAAAAGGACTATGGACACTTCGTGCCTTCGGACGGCAGCCTTACTTTGAAAC -1 440365 NM_000702.3(ATP1A2):c.2143G>A (p.Gly715Arg) ATP1A2 Jan 21, 2015 MedGen:CN517202 not provided germline 1 160135461 CAGGGAGCCATTGTGGCCGTGACGGGTGACGGGGTGAACGACTCCCCTGCATTGAAGAAGG 886041076 263769 NM_005506.3(SCARB2):c.704+1G>A SCARB2 Mar 05, 2015 MedGen:C0751779,OMIM:254900,Orphanet:ORPHA163696 Epilepsy, progressive myoclonic 4, with or without renal failure germline 4 76176436 TACAAAAATTGTGGAATGGAATGGGAAAACGTAAGTCAAATGATTTATCAGTGGAATTATT -1 433052 NM_000118.3(ENG):c.1686+1G>A ENG Oct 12, 2016 MedGen:CN169374 not specified germline 9 127818119 CTGCGTCCCAAGACCGGGTCTCAAGACCAGGTGAGTGGGGCCTGGGCCGGCCCCAGCTTCA 45517128 59081 NM_000548.4(TSC2):c.774+1G>A TSC2 Jan 03, 2017 MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000;MedGen:CN517202 Tuberous sclerosis syndrome;not provided germline 16 2056770 GTCAAGGAGCTCTGCGAGCCTTGCTGGAAGGTGGGGTTTCTGAAACTGCTCTGGAAGGTTC 61751399 39174 NM_000350.2(ABCA4):c.3364G>A (p.Glu1122Lys) ABCA4 Jan 01, 2015 Human Phenotype Ontology:HP:0000547,MeSH:D012174,MedGen:C0035334,OMIM:268000,Orphanet:ORPHA791,SNOMED CT:28835009;MeSH:C535804,MedGen:C1855465,OMIM:248200;MedGen:CN517202 Retinitis pigmentosa;Stargardt disease 1;not provided germline;unknown 1 94041367 ACCATCATCATGTCCACTCACCACATGGACGAGGCCGACCTCCTTGGGGACCGCATTGCCA -1 439901 NM_000441.1(SLC26A4):c.601-1G>A SLC26A4 Jul 01, 2017 Human Phenotype Ontology:HP:0011387,MedGen:C1863752,OMIM:600791 Enlarged vestibular aqueduct germline 7 107674944 TTTAATTTTTCTTTCCTTTTCCTTATCGTAGTTGATATTTGGTGGCTTGCAGATTGGATTC 121908211 23526 NM_001127221.1(CACNA1A):c.575G>A (p.Arg192Gln) CACNA1A Nov 01, 1996 MedGen:C1832894,OMIM:141500 Familial hemiplegic migraine type 1 germline 19 13371744 TGGCGACAGTTGGGACGGAGTTTGACCTACGGACGCTGAGGGCAGTTCGAGTGCTGCGGCC -1 440780 NM_015560.2(OPA1):c.2355+1G>A OPA1 Jan 12, 2017 MedGen:CN517202 not provided germline 3 193659562 TTATACTGGAAGAATCGGACCCAAGAACAGGTAGAAATAAACAAGTCTCTAGTCTTATGAT 797044901 205280 NM_001376.4(DYNC1H1):c.4700G>A (p.Arg1567Gln) DYNC1H1 Apr 18, 2016 MeSH:D030342,MedGen:C0950123;MedGen:CN517202 Inborn genetic diseases;not provided germline 14 102002694 TCAAGCACCTGCTGCCAGTGGAAACCCAGCGGTTTCAGAGGTATGGCCTCCAGCCAGAGAG 80338815 18090 NM_000487.5(ARSA):c.465+1G>A ARSA Jul 13, 2017 MedGen:C0023522,OMIM:250100,Orphanet:ORPHA512,SNOMED CT:396338004;MedGen:C0751279,Orphanet:ORPHA309271,SNOMED CT:24326000;MedGen:C0751276,Orphanet:ORPHA309263,SNOMED CT:44359008;MedGen:CN517202 Metachromatic leukodystrophy;Metachromatic leukodystrophy, adult type;Metachromatic leukodystrophy, juvenile type;not provided germline;unknown 22 50627165 TTTCTAGGCATCCCGTACTCCCACGACCAGGTAGGAACCACCCGGGCCCTCAGCCACCCTC 120074164 18228 NM_017653.4(DYM):c.259G>A (p.Glu87Lys) DYM Feb 01, 2003 MedGen:C1846431,OMIM:607326 Smith-McCort dysplasia 1 germline 18 49379693 CTAATTAAGGTCTTCCTTTCTAGAACCAAAGAACTAAAACTTTCAGCAGAATGTCAGAAGT 28938168 22723 NM_021603.3(FXYD2):c.115G>A (p.Gly39Arg) FXYD2 Jun 01, 2015 Human Phenotype Ontology:HP:0005567,MedGen:C1835171,OMIM:154020,Orphanet:ORPHA34528 Renal magnesium wasting germline 11 117822424 CTGATCTTCGCTGGACTGGCCTTCATCGTGGGGCTCCTCATCCTCCTCAGTAAGTGGGGTG 786203889 185653 NM_007194.3(CHEK2):c.278G>A (p.Trp93Ter) CHEK2 Dec 31, 2015 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 22 28734444 AAGAACCTGAGGAGCCTACCCCTGCCCCCTGGGCTCGATTATGGGCCCTTCAGGATGGATT 869025332 223760 NM_033380.2(COL4A5):c.2741G>A (p.Gly914Asp) COL4A5 Feb 02, 2016 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive inherited X 108621866 CAGGCCCACCAGGACCTTTGGGAATTCCTGGCAGGAGTGGTGTACCTGGTCTTAAAGGTAA 137853585 28681 NM_000175.4(GPI):c.1615G>A (p.Asp539Asn) GPI Sep 15, 1996 MedGen:C3150730,OMIM:613470,Orphanet:ORPHA712 Hemolytic anemia, nonspherocytic, due to glucose phosphate isomerase deficiency germline 19 34399974 CTTGATGGCAGTGCTCAAGTGACCTCTCACGACGCTTCTACCAATGGGCTCATCAACTTCA -1 478700 NM_007294.3(BRCA1):c.1154G>A (p.Trp385Ter) BRCA1 Apr 25, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 17 43094377 TAAATAGCAGCATTCAGAAAGTTAATGAGTGGTTTTCCAGAAGTGATGAACTGTTAGGTTC 111320759 29383 NM_000900.4(MGP):c.94+1G>A MGP Jun 08, 2017 MedGen:C1855607,OMIM:245150,Orphanet:ORPHA85202;MedGen:CN517202 Keutel syndrome;not provided germline 12 14884212 CACATGAAAGCATGGAATCTTATGAACTTAGTAAGTGAATATTTAACTTCTTTATTCAAAT 587783945 168408 NM_133433.3(NIPBL):c.4320+1G>A NIPBL Feb 08, 2013 MedGen:CN029798,OMIM:122470 Cornelia de Lange syndrome 1 germline 5 37008089 CAGTTGTGTGCCATTAAGTTAGTCACTGCAGTAAGTATAATCAATTTGTATTTTTAGTTAC 67815019 413980 NM_000088.3(COL1A1):c.3505G>A (p.Gly1169Ser) COL1A1 Jul 06, 2017 MeSH:D010013,MedGen:C0029434,Orphanet:ORPHA666,SNOMED CT:78314001;MedGen:C0023931,OMIM:166200,SNOMED CT:385482004 Osteogenesis imperfecta;Osteogenesis imperfecta type I germline;maternal;unknown 17 50187041 CCTGGCCCCATTGGGCCCCCTGGTCCTCGCGGTCGCACTGGTGATGCTGGTCCTGTTGTAT 147623570 132598 NM_001739.1(CA5A):c.555G>A (p.Lys185=) CA5A Sep 28, 2017 MedGen:C3810404,OMIM:615751,Orphanet:ORPHA401948;MedGen:CN517202 Carbonic anhydrase VA deficiency, hyperammonemia due to;not provided germline 16 87902425 TGGTTTGGCTGTGATAGGCGTGTTTTTAAAGGTAATCACTTGCTCGGGTGTAGATCTAATG 118204447 15753 NM_000512.4(GALNS):c.178G>A (p.Asp60Asn) GALNS Jul 01, 2003 MedGen:C0086651,OMIM:253000,Orphanet:ORPHA309297,SNOMED CT:7259005 Mucopolysaccharidosis, MPS-IV-A germline 16 88842772 GGAGAGCCCTCCAGAGAGACCCCGAATTTGGACCGGATGGCTGCAGAAGGGCTGCTTTTCC 142948132 247466 NM_001399.4(EDA):c.1001G>A (p.Arg334His) EDA Aug 17, 2016 MedGen:C1970757,OMIM:313500 Tooth agenesis, selective, X-linked, 1 germline X 70035434 TGGATGAGAAGCCCTTCCTGCAGTGCACACGCAGCATCGAGACGGGCAAGACCAACTACAA 886037861 247684 NM_012062.4(DNM1L):c.1084G>A (p.Gly362Ser) DNM1L Aug 25, 2016 MedGen:C3280660,OMIM:614388,Orphanet:ORPHA330050 Encephalopathy due to defective mitochondrial and peroxisomal fission 1 germline 12 32731018 AAACCATATACTTCATTGCCTTTCAGATGCGGTGGTGCTAGAATTTGTTATATTTTCCATG 104886253 36009 NM_000495.4(COL4A5):c.3686G>A (p.Gly1229Asp) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108668400 CAGGTCCAAAGGGCGAACCAGGCTTTCACGGTTTCCCTGGTGTGCAGGGTCCCCCAGGCCC 74315368 27820 NM_003000.2(SDHB):c.725G>A (p.Arg242His) SDHB Sep 18, 2017 Human Phenotype Ontology:HP:0100723,MeSH:D046152,MedGen:C0238198,OMIM:606764,Orphanet:ORPHA44890;MedGen:C1708353,Orphanet:ORPHA29072;MedGen:C0027672,SNOMED CT:699346009;MedGen:C1861848,OMIM:115310;Human Phenotype Ontology:HP:0002666,MedGen:C0031511,OMIM:171300;MedGen:CN517202 Gastrointestinal stroma tumor;Hereditary Paraganglioma-Pheochromocytoma Syndromes;Hereditary cancer-predisposing syndrome;Paragangliomas 4;Pheochromocytoma;not provided germline;unknown 1 17022648 CCAAGCTGCAGGACCCATTCTCTCTATACCGCTGCCACACCATCATGAACTGCACAAGGAC 193302912 222904 NM_000202.7(IDS):c.935G>A (p.Gly312Asp) IDS Oct 21, 2010 MedGen:C0026705,OMIM:309900,SNOMED CT:70737009 Mucopolysaccharidosis, MPS-II maternal X 149490385 CCTCTGTGTCATATTTGGATACACAGGTCGGCCGCCTCTTGAGTGCTTTGGACGATCTTCA 151045328 20182 NM_005709.3(USH1C):c.216G>A (p.Val72=) USH1C May 19, 2016 MeSH:D052245,MedGen:C0271097,Orphanet:ORPHA886;MedGen:C1568247,OMIM:276900,Orphanet:ORPHA231169;MedGen:C1848604,OMIM:276904 Usher syndrome;Usher syndrome, type 1;Usher syndrome, type 1C germline;unknown 11 17531431 TCGGCCGCTGATCCCACTGAAGCACCAGGTGGAATATGATCAGCTGACCCCCCGGCGCTCC 398123798 100249 NM_003494.3(DYSF):c.5946+1G>A DYSF Jun 14, 2013 MedGen:C1850889,OMIM:253601,Orphanet:ORPHA268;MedGen:C1850808,OMIM:254130,Orphanet:ORPHA45448 Limb-girdle muscular dystrophy, type 2B;Miyoshi muscular dystrophy 1 germline 2 71679236 GCAGAAGAGGGTGAGAAGAAAATACTGGCGGTAAGTCTACTTCCTCCAGCCCCAGTGGAGG 28936370 24137 NM_001287174.1(ABCC8):c.4058G>A (p.Arg1353His) ABCC8 Sep 01, 2004 MedGen:C0271714,OMIM:240800,SNOMED CT:62151007 Leucine-induced hypoglycemia germline 11 17396980 GGAAGATCCAGATCCAGAACCTGAGCGTGCGCTACGACAGCTCCCTGAAGCCGGTGCTGAA 80338849 19858 NM_000441.1(SLC26A4):c.1001+1G>A SLC26A4 Jan 24, 2017 Human Phenotype Ontology:HP:0011387,MedGen:C1863752,OMIM:600791;Human Phenotype Ontology:HP:0011387,MedGen:C1863752,OMIM:600791;MedGen:C0271829,OMIM:274600,Orphanet:ORPHA705,SNOMED CT:70348004;MedGen:C0271829,OMIM:274600,Orphanet:ORPHA705,SNOMED CT:70348004;MedGen:CN239421;MedGen:CN517202 Enlarged vestibular aqueduct;Enlarged vestibular aqueduct;Pendred's syndrome;Pendred's syndrome;SLC26A4-Related Disorders;not provided germline;maternal;unknown 7 107683538 TGCTGGCATTGTTAAATCCATCCCAAGGGGGTGAGTGTGGTGTTCCTCTTAGTACTAATAC -1 444389 NM_000368.4(TSC1):c.492G>A (p.Trp164Ter) TSC1 Oct 19, 2017 MedGen:CN517202 not provided germline 9 132923364 CTTTGACATTTTTGGCCGTCTGTCATCATGGTGCCTGAAGAAACCAGGTACAGATCTCCTC 118204075 16585 NM_000237.2(LPL):c.665G>A (p.Gly222Glu) LPL Oct 05, 1992 MedGen:C0023817,OMIM:238600,Orphanet:ORPHA309015,SNOMED CT:238086005,SNOMED CT:275598004 Hyperlipoproteinemia, type I germline 8 19954243 TCACCAGAGGGTCCCCTGGTCGAAGCATTGGAATCCAGAAACCAGTTGGGCATGTTGACAT 398124611 102539 NM_198270.3(NHS):c.953G>A (p.Trp318Ter) NHS Jul 12, 2013 MedGen:CN517202 not provided germline X 17721541 TCCCTTCCACACTGGACAAGCAGACCAACTGGAGCAAAGCACTACCTCTCCCGACGCCAGA 878854416 243874 NM_020760.3(HECW2):c.3572G>A (p.Arg1191Gln) HECW2 Jan 10, 2018 MedGen:C4310643,OMIM:617268;MedGen:CN517202 Neurodevelopmental disorder with hypotonia, seizures, and absent language;not provided germline 2 196242162 CCAATGCCCGGGCTCCAGCCCCTTACAAGCGGGATTTCGAAGCCAAACTGAGGAACTTTTA 63749884 23889 NM_000447.2(PSEN2):c.717G>A (p.Met239Ile) PSEN2 Dec 23, 2010 MedGen:C1847200,OMIM:606889;MedGen:CN517202 Alzheimer disease, type 4;not provided germline 1 226888979 GGCCTACCTCATCATGATCAGTGCGCTCATGGCCCTAGTGTTCATCAAGTACCTCCCAGAG 886039389 259648 NM_006147.3(IRF6):c.576G>A (p.Trp192Ter) IRF6 Mar 24, 2016 MedGen:CN517202 not provided germline 1 209792360 TGTGGGCAACTGCAGCCCGGAGGCAGTGTGGCCCAAAACTGAACCCCTGGAGATGGAAGTA 111033270 19955 NM_022124.5(CDH23):c.5237G>A (p.Arg1746Gln) CDH23 Jun 02, 2017 MedGen:CN239227;MedGen:C1832845,OMIM:601067;MedGen:CN517202 CDH23-Related Disorders;Usher syndrome, type 1D;not provided germline 10 71779316 ACATCAACGACAATGTGCCTACCTTCCCCCGGGACTATGAGGGACCATTTGAAGTCACTGA 387906523 28498 NM_000371.3(TTR):c.199G>A (p.Gly67Arg) TTR Apr 01, 2000 MedGen:C2751492,OMIM:105210,SNOMED CT:43532007,SNOMED CT:442012008 Amyloidogenic transthyretin amyloidosis germline 18 31593025 GCTGATGACACCTGGGAGCCATTTGCCTCTGGGTAAGTTGCCAAAGAACCCTCCCACAGGA 796053377 202332 NM_003165.3(STXBP1):c.1702+1G>A STXBP1 Jul 11, 2017 na;MedGen:CN517202 STXBP1-associated neurodevelopmental disorder;not provided de novo;germline 9 127682561 AGGCCAACGGAAAGTGGGAGGTGCTGATAGGTGAGTGGCCGTGCTTCCAGCGGAAGGCGCC 33950507 30200 NM_000518.4(HBB):c.79G>A (p.Glu27Lys) HBB Aug 23, 2017 MedGen:C3841475;na;MedGen:C0002895,OMIM:603903,Orphanet:ORPHA232,SNOMED CT:127040003;MedGen:C0019024,SNOMED CT:83815000;MedGen:C0472777,Orphanet:ORPHA231249,SNOMED CT:234392002;MedGen:C2720293;MedGen:C0005283,OMIM:613985,Orphanet:ORPHA848,SNOMED CT:65959000;MedGen:CN517202;MedGen:CN169374 Beta-plus-thalassemia;HEMOGLOBIN T (CAMBODIA);Hb SS disease;Hemoglobin E;Hemoglobin E/beta thalassemia disease;Malaria, resistance to;beta Thalassemia;not provided;not specified germline;unknown 11 5226943 GGCAAGGTGAACGTGGATGAAGTTGGTGGTGAGGCCCTGGGCAGGTTGGTATCAAGGTTAC 79436363 132656 NM_025132.3(WDR19):c.3533G>A (p.Arg1178Gln) WDR19 May 30, 2017 MedGen:C4225376,OMIM:616307;MedGen:CN517202 Senior-Loken syndrome 8;not provided germline 4 39273029 ATCACATGAAAGGGGCTCGCATGCTCATTCGGGTGGCCAACAACATCAGCAAATTTCCATC 104894525 22747 NM_000303.2(PMM2):c.385G>A (p.Val129Met) PMM2 Feb 23, 2017 MedGen:C0349653,OMIM:212065,Orphanet:ORPHA79318,SNOMED CT:277893002;MedGen:CN517202 Carbohydrate-deficient glycoprotein syndrome type I;not provided germline;unknown 16 8811116 TTCATTGAATTCCGAAATGGGATGTTAAACGTGTCCCCTATTGGAAGAAGCTGCAGCCAAG 121434596 28940 NM_002524.4(NRAS):c.38G>A (p.Gly13Asp) NRAS May 31, 2016 Human Phenotype Ontology:HP:0004808,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:ORPHA519,SNOMED CT:17788007;MedGen:C0278701;MeSH:D015179,MedGen:CN236642;Human Phenotype Ontology:HP:0012209,MedGen:C0349639,OMIM:607785,Orphanet:ORPHA86834;Human Phenotype Ontology:HP:0012539,MedGen:C0024305,OMIM:605027,Orphanet:ORPHA547,SNOMED CT:1929004;Human Phenotype Ontology:HP:0002861,MeSH:D008545,MedGen:C0025202,SNOMED CT:2092003;MeSH:C562393,MedGen:C0151779,SNOMED CT:93655004;Human Phenotype Ontology:HP:0002885,MeSH:D008527,MedGen:C0025149,OMIM:155255,Orphanet:ORPHA616;Human Phenotype Ontology:HP:0006775,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:ORPHA29073,SNOMED CT:109989006,SNOMED CT:55921005;MeSH:D009190,MedGen:C0026986,OMIM:614286;MedGen:C2750732,OMIM:613224;MedGen:C2674723,OMIM:614470,Orphanet:ORPHA268114;Human Phenotype Ontology:HP:0006740,MedGen:C0279680;MedGen:CN517202 Acute myeloid leukemia;Adenocarcinoma of stomach;Colorectal Neoplasms;Juvenile myelomonocytic leukemia;Malignant lymphoma, non-Hodgkin;Malignant melanoma;Malignant melanoma of skin;Medulloblastoma;Multiple myeloma;Myelodysplastic syndrome;Noonan syndrome 6;RAS-associated autoimmune leukoproliferative disorder;Transitional cell carcinoma of the bladder;not provided germline;somatic;unknown 1 114716123 AGTACAAACTGGTGGTGGTTGGAGCAGGTGGTGTTGGGAAAAGCGCACTGACAATCCAGCT 121909546 33042 NM_000488.3(SERPINC1):c.1306G>A (p.Ala436Thr) SERPINC1 Jun 16, 1988 MedGen:C0272375,OMIM:613118,Orphanet:ORPHA82,SNOMED CT:36351005 Antithrombin III deficiency germline 1 173903978 TCGCTAAACCCCAACAGGGTGACTTTCAAGGCCAACAGGCCTTTCCTGGTTTTTATAAGAG 368647424 51366 NM_005984.4(SLC25A1):c.389G>A (p.Gly130Asp) SLC25A1 Apr 29, 2013 MedGen:C2746066,OMIM:615182,Orphanet:ORPHA19 Combined d-2- and l-2-hydroxyglutaric aciduria germline 22 19177779 ACAGCACGCGTGGGCTGCTGTGCGGCCTGGGCGCTGGCGTGGCCGAGGCCGTGGTGGTCGT 199473368 78456 NM_000891.2(KCNJ2):c.200G>A (p.Arg67Gln) KCNJ2 May 28, 2015 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MedGen:CN517202 Congenital long QT syndrome;not provided germline 17 70175239 AGTTCATCAATGTGGGTGAGAAGGGGCAACGGTACCTCGCAGACATCTTCACCACGTGTGT 397515355 19301 NM_000784.3(CYP27A1):c.1263+1G>A CYP27A1 Oct 19, 2017 MedGen:C0238052,OMIM:213700,Orphanet:ORPHA909,SNOMED CT:63246000;MedGen:CN517202 Cholestanol storage disease;not provided germline 2 218814459 GAAGTTGATGGCTTCCTCTTCCCCAAGAACGTGAGTGGGGCTAGAGAGCCCGATTGCCCAG 1085307107 227720 NM_182760.3(SUMF1):c.337G>A (p.Glu113Lys) SUMF1 Apr 01, 2016 MedGen:C0268263,OMIM:272200,Orphanet:ORPHA585,SNOMED CT:54898003 Multiple sulfatase deficiency germline 3 4452983 ACAGATGATCCTCAGATAAAGCAGGATGGGGAAGCACCTGCGAGGAGAGTTACTATTGATG 137852259 25652 NM_000133.3(F9):c.1136G>A (p.Arg379Gln) F9 Oct 01, 1988 MedGen:C0008533,OMIM:306900,Orphanet:ORPHA98879,SNOMED CT:41788008 Hereditary factor IX deficiency disease germline X 139561821 TTCAGTACCTTAGAGTTCCACTTGTTGACCGAGCCACATGTCTTCGATCTACAAAGTTCAC 121912904 32285 NM_000089.3(COL1A2):c.2414G>A (p.Gly805Asp) COL1A2 Dec 21, 2017 MedGen:C0268360,OMIM:166210,SNOMED CT:86470003 Osteogenesis imperfecta, recessive perinatal lethal germline 7 94422967 CCTTGTACATTTGCTCATAGGGTATTTCTGGCCCTCCTGGTCCCCCTGGTCCTGCTGGGAA 104886096 35705 NM_000495.4(COL4A5):c.1094G>A (p.Gly365Glu) COL4A5 Feb 02, 2016 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive inherited X 108586676 TAGGAGAAAAAGGAAACATTGGGTTGCCTGGGTTGCCTGGAGAAAAAGGAGAGCGAGGATT 797045367 209266 NM_000052.6(ATP7A):c.3112-1G>A ATP7A Feb 08, 2013 MedGen:C0022716,OMIM:309400,Orphanet:ORPHA565,SNOMED CT:59178007 Menkes kinky-hair syndrome germline X 78031399 ATCAAGTCATTGTATCTTAATTTTTTTACAGGTAAAGGTAGTGGTATTTGATAAGACTGGA 121918614 27963 NM_000702.3(ATP1A2):c.2152G>A (p.Asp718Asn) ATP1A2 May 25, 2004 MedGen:C1865322,OMIM:602481 Familial hemiplegic migraine type 2 germline 1 160135470 ATTGTGGCCGTGACGGGTGACGGGGTGAACGACTCCCCTGCATTGAAGAAGGCTGACATTG 41270025 23736 NM_000309.4(PPOX):c.503G>A (p.Arg168His) PPOX May 17, 2017 MedGen:C0162532,OMIM:176200,Orphanet:ORPHA79473,SNOMED CT:58275005;MedGen:CN517202 Variegate porphyria;not provided germline 1 161168463 TGGCGTCTCTAGCCATGGACAGTCTCTGCCGTGGAGTGTTTGCAGGCAACAGCCGTGAGCT 756026847 214738 NR_023343.1(RNU4ATAC):n.37G>A RNU4ATAC Nov 02, 2015 Gene:57788,MedGen:C1846059,OMIM:616651,Orphanet:ORPHA353298 Roifman syndrome germline 2 121530916 CCTTTTCTTGGGGTTGCGCTACTGTCCAATGAGCGCATAGTGAGGGCAGTACTGCTAACGC 45515894 27446 NM_000548.4(TSC2):c.1322G>A (p.Trp441Ter) TSC2 Sep 01, 2009 MedGen:C1860707,OMIM:613254;MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000 Tuberous sclerosis 2;Tuberous sclerosis syndrome germline 16 2062561 CGCAGTCCATCCACCCGGCCAAGGACGGCTGGATTCAGAACCTGCAGGCGCTGATGGAGAG 72648320 44562 NM_000088.3(COL1A1):c.1200+1G>A COL1A1 Aug 18, 2011 MeSH:D010013,MedGen:C0029434,Orphanet:ORPHA666,SNOMED CT:78314001 Osteogenesis imperfecta germline 17 50195433 GATGGACAGCCTGGTGCTAAAGGTGCCAATGTAAGTATCCTGCCAGGCTTCAGTCCCACTC 587776981 59861 NM_001127496.1(SPRY4):c.46G>A (p.Val16Ile) SPRY4 May 02, 2013 MedGen:C3808971,OMIM:615266 Hypogonadotropic hypogonadism 17 with or without anosmia germline 5 142315063 CCACAGAGCGCCCCCTTGACTCCCAACTCAGTCATGGTCCAGCCCCTTCTTGACAGCCGGA 104894229 27641 NM_005343.3(HRAS):c.34G>A (p.Gly12Ser) HRAS Jun 19, 2017 Human Phenotype Ontology:HP:0004808,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:ORPHA519,SNOMED CT:17788007;Human Phenotype Ontology:HP:0030078,MeSH:C538231,MedGen:C0152013;MedGen:C0007112;MedGen:C0278701;MeSH:D003528,MedGen:C0010606;Human Phenotype Ontology:HP:0011459,MedGen:C0152018,Orphanet:ORPHA70482;MeSH:D015179,MedGen:CN236642;MedGen:C0587248,OMIM:218040,Orphanet:ORPHA3071,SNOMED CT:309776008;MedGen:C3277679;Human Phenotype Ontology:HP:0100843,MeSH:D005909,MedGen:C0017636,SNOMED CT:63634009;MedGen:C2239176,OMIM:114550,Orphanet:ORPHA88673,SNOMED CT:187769009,SNOMED CT:25370001;MeSH:C562393,MedGen:C0151779,SNOMED CT:93655004;MedGen:C0153574,Orphanet:ORPHA213569;Human Phenotype Ontology:HP:0006775,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:ORPHA29073,SNOMED CT:109989006,SNOMED CT:55921005;MeSH:D009190,MedGen:C0026986,OMIM:614286;MedGen:C1968782;MeSH:D009303,MedGen:C0027439;Human Phenotype Ontology:HP:0100013,MeSH:D001943,MedGen:C1458155,Orphanet:ORPHA180250,SNOMED CT:126926005;Human Phenotype Ontology:HP:0100031,MeSH:D013964,MedGen:C0040136,Orphanet:ORPHA100087;MedGen:C0853032;MedGen:CN231320;MedGen:C0279663;Human Phenotype Ontology:HP:0006725,MedGen:C0281361;MeSH:C538614,MedGen:C1336078;MedGen:CN166718,Orphanet:ORPHA98733;MeSH:C535575,MedGen:C1168401,OMIM:275355,Orphanet:ORPHA67037;Human Phenotype Ontology:HP:0006739,MedGen:C0553723;Human Phenotype Ontology:HP:0006740,MedGen:C0279680;MedGen:C0280630;MeSH:D002583,MedGen:CN236667;MedGen:CN517202;MedGen:CN169374 Acute myeloid leukemia;Adenocarcinoma of lung;Adenocarcinoma of prostate;Adenocarcinoma of stomach;Adenoid cystic carcinoma;Carcinoma of esophagus;Colorectal Neoplasms;Costello syndrome;Epidermal nevus with urothelial cancer, somatic;Glioblastoma;Hepatocellular carcinoma;Malignant melanoma of skin;Malignant neoplasm of body of uterus;Multiple myeloma;Myelodysplastic syndrome;Myopathy, congenital, with excess of muscle spindles;Nasopharyngeal Neoplasms;Neoplasm of the breast;Neoplasm of the thyroid gland;Nevus sebaceous;Nevus, woolly hair;Ovarian Serous Cystadenocarcinoma;Pancreatic adenocarcinoma;Papillary renal cell carcinoma, sporadic;Rasopathy;Squamous cell carcinoma of the head and neck;Squamous cell carcinoma of the skin;Transitional cell carcinoma of the bladder;Uterine Carcinosarcoma;Uterine cervical neoplasms;not provided;not specified de novo;germline;somatic;unknown 11 534289 ACGGAATATAAGCTGGTGGTGGTGGGCGCCGGCGGTGTGGGCAAGAGTGCGCTGACCATCC 587781702 151091 NM_000546.5(TP53):c.920-1G>A TP53 Oct 04, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline 17 7673609 CTTTTATCACCTTTCCTTGCCTCTTTCCTAGCACTGCCCAACAACACCAGCTCCTCTCCCC 760428437 260004 NM_001360.2(DHCR7):c.1396G>A (p.Val466Met) DHCR7 Apr 22, 2017 MedGen:C0175694,OMIM:270400,Orphanet:ORPHA818,SNOMED CT:43929004;MedGen:CN517202 Smith-Lemli-Opitz syndrome;not provided germline 11 71435407 GGCCGGGACTGGGAGCGCTACACCGCCGCAGTGCCTTACCGCCTGCTGCCTGGAATCTTCT 199469633 106408 NM_017415.2(KLHL3):c.1480G>A (p.Ala494Thr) KLHL3 - Gene:7830,MedGen:C1449844,OMIM:145260,Orphanet:ORPHA757,SNOMED CT:15689008 Pseudohypoaldosteronism, type 2 germline 5 137628408 GGGGTTGGAGTGCTTAGCGGACAGCTGTACGCCACAGGTGGGCATGATGGGCCTTTGGTGA 121913551 29405 NM_000302.3(PLOD1):c.2032G>A (p.Gly678Arg) PLOD1 Feb 03, 2017 MedGen:C0268342,OMIM:225400,Orphanet:ORPHA1900,SNOMED CT:25606004 Ehlers-Danlos syndrome, hydroxylysine-deficient germline 1 11974656 AGGCCACTGATGCTTTCTGTCTCCCAGGGCGGGGGCTGTCGGTTCCTGCGCTACAACTGTT 199474826 24698 m.8009G>A MT-CO2 Nov 01, 1998 MedGen:CN029768 Familial colorectal cancer unknown MT 8009 GACCTGCGACTCCTTGACGTTGACAATCGAGTAGTACTCCCGATTGAAGCCCCCATTCGTA 281865348 104869 NM_000330.3(RS1):c.522+1G>A RS1 Aug 04, 2016 MedGen:C0271091,OMIM:312700,Orphanet:ORPHA792,SNOMED CT:86923008;MedGen:CN517202 Juvenile retinoschisis;not provided germline;unknown X 18644429 TACTACAAGGACCAGACTGGAAACAACCGGGTAAGTTGGGCTTATCCCAAACCAACTTCAG 118192136 76851 NM_000540.2(RYR1):c.13912G>A (p.Gly4638Ser) RYR1 May 11, 2010 MedGen:C0751951,OMIM:117000,Orphanet:ORPHA597,SNOMED CT:43152001;MedGen:CN517202 Central core disease;not provided unknown 19 38572184 ATGGTGTACTACTTCCTGGAGGAAAGCACAGGCTACATGGAACCCGCCCTGCGGTGTCTGA 137852228 25612 NM_000133.3(F9):c.224G>A (p.Arg75Gln) F9 Sep 01, 1989 MedGen:C0008533,OMIM:306900,Orphanet:ORPHA98879,SNOMED CT:41788008 Hereditary factor IX deficiency disease germline X 139537145 TGGAAGAAAAGTGTAGTTTTGAAGAAGCACGAGAAGTTTTTGAAAACACTGAAAGAACAGT 104895085 17592 NM_000243.2(MEFV):c.1958G>A (p.Arg653His) MEFV Feb 23, 2017 MedGen:C0031069,OMIM:249100,Orphanet:ORPHA342,SNOMED CT:12579009;MedGen:CN517202 Familial Mediterranean fever;not provided germline 16 3243529 TGGGCTCTCCGAGTTTCCTCTCTGGCCGCCGTTACTGGGAGGTGGAGGTTGGAGACAAGAC 387907350 51198 NM_001130004.1(ACTN1):c.673G>A (p.Glu225Lys) ACTN1 Mar 07, 2013 MedGen:C3554663,OMIM:615193 Platelet-type bleeding disorder 15 germline 14 68904658 TACCTGGACATCCCCAAGATGCTGGATGCCGAAGGTGAAAGGCGCTTTCCTTCTGTGTCTC 191875469 439194 NM_007055.3(POLR3A):c.1909+22G>A POLR3A Jun 02, 2017 MedGen:CN517202 not provided germline 10 78009515 ATGATTCCTGTGAGTGGACGGAACTCGGGTGGGGAGAAGGAGGAACGTGACAGAAAAGCAA 121918322 23744 NM_002010.2(FGF9):c.296G>A (p.Ser99Asn) FGF9 Jul 01, 2009 MedGen:C2751826,OMIM:612961 Multiple synostoses syndrome 3 germline 13 21681060 CTTTGTCTACAGGCATTCTGGAATTTATCAGTATAGCAGTGGGCCTGGTCAGCATTCGAGG 81002802 67422 NM_000059.3(BRCA2):c.9117+1G>A BRCA2 Dec 14, 2016 MedGen:C2675520,OMIM:612555;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 2;Hereditary cancer-predisposing syndrome germline 13 32379914 ACAAAAAAAACTCAGTATCAACAACTACCGGTACAAACCTTTCATTGTAATTTTTCAGTTT 879253838 224633 NM_000255.3(MUT):c.1084-1G>A MUT - MedGen:C1855114,OMIM:251000 Methylmalonic aciduria due to methylmalonyl-CoA mutase deficiency germline 6 49451715 TTGAGTTTTTGTTTTTTATCAAATATTTTAGGATCCCTACAATAATATTGTCCGTACTGCA 397508470 68281 NM_000492.3(CFTR):c.2989-1G>A CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline;unknown 7 117610518 ACTCACCAACATGTTTTCTTTGATCTTACAGTTGTTATTAATTGTGATTGGAGCTATAGCA 587783697 168905 NM_003482.3(KMT2D):c.15791G>A (p.Trp5264Ter) KMT2D Feb 08, 2013 MedGen:CN030661,OMIM:147920 Kabuki syndrome 1 germline 12 49024940 ACTGCTCTCTTCCCTGCTTCTTAGCCGTGTGGAATCGCATCATTGAGCCTGTGGCTGCCAT 587777483 143179 NM_006623.3(PHGDH):c.488G>A (p.Arg163Gln) PHGDH Jun 05, 2014 MedGen:CN032230,OMIM:256520 Neu-Laxova syndrome 1 germline 1 119727080 TGGGCAGGATTGGGAGAGAGGTAGCTACCCGGATGCAGTCCTTTGGGATGAAGGTAAGATG -1 481490 NM_001001563.3(TIMM50):c.973G>A (p.Ala325Thr) TIMM50 Nov 02, 2017 MedGen:CN510468,OMIM:617698 3-METHYLGLUTACONIC ACIDURIA, TYPE IX paternal 19 39486463 GGCTTCATCTCCTACCGCCTATTCCGGGACGCCACAAGATACATGGATGGACACCATGTAA 1064793976 405721 NM_014946.3(SPAST):c.1729-1G>A SPAST Aug 22, 2015 MedGen:CN517202 not provided germline 2 32154373 TTGTATTGTCATGTGCTTTTTAAAAATCTAGATGAGAAATATTCGATTATCTGACTTCACT 62507336 108472 NM_000277.2(PAH):c.561G>A (p.Trp187Ter) PAH Dec 27, 2017 MedGen:C0031485,OMIM:261600,Orphanet:ORPHA716,SNOMED CT:154735006;MedGen:CN517202 Phenylketonuria;not provided germline;unknown 12 102855281 GGAATACATGGAGGAAGAAAAGAAAACATGGGGCACAGTGTTCAAGACTCTGAAGTCCTTG 1057519646 362648 NM_015295.2(SMCHD1):c.404G>A (p.Ser135Asn) SMCHD1 Feb 27, 2017 MedGen:C1863878,OMIM:603457,Orphanet:ORPHA1135 Arhinia choanal atresia microphthalmia de novo;germline;unknown 18 2667011 TTAAAAGTGGCATGTATGAATATTATGCCAGTGAAGGACAAAATCCTTTGCGTAAGTATCC 779538333 264873 NM_130810.3(DNAAF4):c.1047+1G>A DNAAF4 May 16, 2016 MedGen:CN517202 not provided germline 15 55434904 TTACACAAGGCTATTGAAGATTCTTCTAAGGTATGGATATCTATGTATGATATATGGTGCT 80356798 24106 NM_001876.3(CPT1A):c.1876-1G>A (p.Val626_Glu676del) CPT1A Jul 29, 2016 MedGen:C0342789,OMIM:255120,SNOMED CT:238001003 Carnitine palmitoyltransferase I deficiency germline;unknown 11 68761688 ACATATGTCCTTCCCACCTTTTGTCACTCAGGTGGAACAGAGGCTGAAGTTGTTCAAGTTG 876661168 231525 NM_004321.7(KIF1A):c.506G>A (p.Arg169Lys) KIF1A Dec 17, 2015 MedGen:CN517202 not provided germline 2 240786437 ACCCCAAGAACAAGGGCAACCTTCGCGTGAGGGAGCACCCACTGCTGGGGCCCTACGTGGA -1 459066 NM_000368.4(TSC1):c.2027G>A (p.Trp676Ter) TSC1 Mar 07, 2017 MedGen:C1854465,OMIM:191100 Tuberous sclerosis 1 germline 9 132904425 GGTTGCCTTTACCCAGCAAGTCTGTCGACTGGACCCACTTTGGAGGTAAAGTTGTTACTTT 185836803 48235 NM_017570.4(OPLAH):c.3265G>A (p.Val1089Ile) OPLAH Jan 24, 2013 Human Phenotype Ontology:HP:0040142,MedGen:C0268525,OMIM:260005,Orphanet:ORPHA33572,SNOMED CT:26132002 5-Oxoprolinase deficiency germline 8 144052487 AACGTGCTCACGTCGCAGCGCGTGGTGGATGTCATCCTGGGGGCCTTTGGGGCCTGCGCCG 28933673 25290 NM_000132.3(F8):c.3169G>A (p.Glu1057Lys) F8 Mar 18, 2016 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154930621 GTCTGGCAAAATATATTAGAAAGTGACACTGAGTTTAAAAAAGTGACACCTTTGATTCATG 786205837 188678 NM_001037.4(SCN1B):c.73G>A (p.Asp25Asn) SCN1B Feb 17, 2012 MedGen:CN517202 not provided germline 19 35032560 TCCTCAGCCTGCGGGGGCTGCGTGGAGGTGGACTCGGAGACCGAGGCCGTGTATGGGATGA 121909579 32601 NM_000096.3(CP):c.2630G>A (p.Trp877Ter) CP Apr 18, 2013 MedGen:C0878682,OMIM:604290,Orphanet:ORPHA48818,SNOMED CT:124224004;MedGen:C1858582 Deficiency of ferroxidase;Hypoceruloplasminemia germline 3 149179587 CTGGAACAGAGGATTCTGCTTGTATTCCATGGGCTTATTATTCAACTGTGGATCAAGTTAA 398124641 44139 NM_024531.4(SLC52A2):c.916G>A (p.Gly306Arg) SLC52A2 Jul 28, 2017 MedGen:C3553538,OMIM:614707;MedGen:CN517202 Brown-Vialetto-Van Laere syndrome 2;not provided germline 8 144360408 GCCGTGCAGAGCTTTTCCTGCTTACCCTACGGGCGTCTGGCCTACCACCTGGCTGTGGTGC 765586205 447010 NM_005957.4(MTHFR):c.1530G>A (p.Lys510=) MTHFR Jul 11, 2017 MedGen:C1856058,OMIM:236250 Homocysteinemia due to MTHFR deficiency germline 1 11793907 GGGCCCCAGCGGGGGCTATGTCTTCCAGAAGGTGTGGTAGGGAGGCACGGGGTGCCCCCCT 312262746 49720 NM_025137.3(SPG11):c.2697G>A (p.Trp899Ter) SPG11 Jan 31, 2013 MedGen:C1858479,OMIM:604360,Orphanet:ORPHA2822 Spastic paraplegia 11, autosomal recessive not provided 15 44620327 TCGCCATGATTGGTTAAACATTATCTTATGGATTGGAGAATTTCAAACCCAGCATAGTTAT 121912668 27946 NM_000343.3(SLC5A1):c.82G>A (p.Asp28Asn) SLC5A1 May 01, 1996 MedGen:C0268186,OMIM:606824,Orphanet:ORPHA35710,SNOMED CT:27943000 Congenital glucose-galactose malabsorption germline 22 32043363 GAGACCCACGAGCTCATTCGCAATGCAGCCGATATCTCCATCATCGTTATCTACTTCGTGG 587776809 430421 NM_001754.4(RUNX1):c.352-1G>A RUNX1 Oct 27, 2015 MedGen:C1832388,OMIM:601399,Orphanet:ORPHA71290 Familial platelet disorder with associated myeloid malignancy germline 21 34880714 TGTCTGCATTTGTCCTTTGACTGGTGTTTAGGTGGTGGCCCTAGGGGATGTTCCAGATGGC 111683277 175150 NM_000256.3(MYBPC3):c.3190+1G>A MYBPC3 Oct 06, 2017 MedGen:C1861862,OMIM:115197;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Familial hypertrophic cardiomyopathy 4;Primary familial hypertrophic cardiomyopathy;not provided germline;unknown 11 47333556 ACAAGGCCACGCTGGTGCTGCAGGTTGTTGGTGCGTGGCCAAGGCCTCCTTGAGCCCCCTT -1 262636 NM_001256214.1(ATP1A3):c.424G>A (p.Val142Met) ATP1A3 Apr 11, 2016 MedGen:CN236437 Juvenile onset psychosis de novo 19 41986202 CAGCTGTACCTGGGCATCGTGCTGGCGGCCGTGGTGATCATCACTGGCTGCTTCTCCTACT 1060500747 404465 NM_000169.2(GLA):c.735G>A (p.Trp245Ter) GLA Sep 23, 2016 Human Phenotype Ontology:HP:0001071,MedGen:C0002986,OMIM:301500,Orphanet:ORPHA324,SNOMED CT:16652001 Fabry disease germline X 101398851 CTGGAAAAGTATAAAGAGTATCTTGGACTGGACATCTTTTAACCAGGAGAGAATTGTTGAT 1060499598 404826 NM_000303.2(PMM2):c.255+1G>A PMM2 Feb 17, 2016 MedGen:C0349653,OMIM:212065,Orphanet:ORPHA79318,SNOMED CT:277893002 Carbohydrate-deficient glycoprotein syndrome type I germline 16 8804844 TACAAAGATGGGAAACTCTTGTGTAGACAGGTAGGTTCTTGAGTATCTGAATTACTATATA 66555264 414003 NM_000088.3(COL1A1):c.1821+1G>A COL1A1 - MedGen:C0023931,OMIM:166200,SNOMED CT:385482004 Osteogenesis imperfecta type I unknown 17 50192993 CGAGGTGTTCCCGGACCCCCTGGCGCTGTCGTAAGTATCTCCTTTCCATCCCTACCTCCTT 137933052 102917 NM_002160.3(TNC):c.5317G>A (p.Val1773Met) TNC Jul 30, 2013 MedGen:C3810170,OMIM:615629 Deafness, autosomal dominant 56 germline 9 115041016 CAGACCAGGCTGGTGAAACTCATACCTGGCGTGGAGTACCTTGTCAGCATCATCGCCATGA 121913133 29885 NM_000183.2(HADHB):c.740G>A (p.Arg247His) HADHB Mar 09, 2017 MedGen:C0342786,OMIM:609015,SNOMED CT:237999008;MedGen:CN517202 Mitochondrial trifunctional protein deficiency;not provided germline 2 26279244 CTCGGCTGGAACAGGATGAATATGCACTGCGCTCTCACAGTCTAGCCAAGAAGGCACAGGA 121908048 18696 NM_000229.1(LCAT):c.951G>A (p.Met317Ile) LCAT Jul 31, 1991 MedGen:C0023195,OMIM:245900,Orphanet:ORPHA650 Norum disease germline 16 67940276 AGACCTGCACTTTGAGGAAGGCTGGTACATGTGGCTGCAGTCACGTGACCTCCTGGCAGGA 397508775 68700 NM_000492.3(CFTR):c.647G>A (p.Trp216Ter) CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline 7 117535315 TGCAAGTGGCACTCCTCATGGGGCTAATCTGGGAGTTGTTACAGGCGTCTGCCTTCTGTGG 398123042 75077 NM_002246.2(KCNK3):c.544G>A (p.Glu182Lys) KCNK3 Jul 25, 2013 MedGen:C3809198,OMIM:615344 Primary pulmonary hypertension 4 germline 2 26727927 TGCATCGGCGCCGCCGCCTTCTCCCACTACGAGCACTGGACCTTCTTCCAGGCCTACTACT 376142095 166369 NM_144773.3(PROKR2):c.743G>A (p.Arg248Gln) PROKR2 Sep 01, 2008 MedGen:C4017072 Hypogonadotropic hypogonadism 3 without anosmia germline 20 5302452 CCATGACCCTGTGCTATGCCAGGATCTCCCGGGAGCTCTGGTTCAAGGCAGTCCCTGGGTT 587783306 167789 NM_000053.3(ATP7B):c.2865+1G>A ATP7B Nov 19, 2015 MedGen:C0019202,OMIM:277900,Orphanet:ORPHA905,SNOMED CT:88518009 Wilson disease germline;unknown 13 51949661 GATTTTGGTGTTGTTCAGAGATACTTTCCTGTAAGTTGAATGCCTTGGGCTATATGGTGGT 104894413 186861 NM_004004.5(GJB2):c.131G>A (p.Trp44Ter) GJB2 Aug 08, 2017 MedGen:C1844678,OMIM:304400,Orphanet:ORPHA383;MedGen:C2675750,OMIM:601544;MedGen:C2673759,OMIM:220290;MedGen:C2673759,OMIM:220290;MedGen:C1865234,OMIM:602540;MedGen:C1835678,OMIM:148210;MedGen:C1835672,OMIM:148350,Orphanet:ORPHA2202;MedGen:C0266004,OMIM:149200,Orphanet:ORPHA2698,SNOMED CT:1271009;MedGen:C0265964,OMIM:124500,Orphanet:ORPHA494,SNOMED CT:24559001;MedGen:CN517202 Deafness, X-linked 2;Deafness, autosomal dominant 3a;Deafness, autosomal recessive 1A;Deafness, autosomal recessive 1A;Hystrix-like ichthyosis with deafness;Keratitis-ichthyosis-deafness syndrome, autosomal dominant;Keratoderma palmoplantar deafness;Knuckle pads, deafness AND leukonychia syndrome;Mutilating keratoderma;not provided germline;unknown 13 20189451 TGATCCTCGTTGTGGCTGCAAAGGAGGTGTGGGGAGATGAGCAGGCCGACTTTGTCTGCAA 121908192 23730 NM_005262.2(GFER):c.581G>A (p.Arg194His) GFER Sep 26, 2012 MedGen:C2751320,OMIM:613076,Orphanet:ORPHA330054;MedGen:CN517202 Myopathy, mitochondrial progressive, with congenital cataract, hearing loss, and developmental delay;not provided germline 16 1985991 CTGACTTCGACTGCTCAAAAGTGGATGAGCGCTGGCGCGACGGCTGGAAGGATGGCTCCTG 72645323 32355 NM_000088.3(COL1A1):c.787G>A (p.Gly263Arg) COL1A1 Jul 05, 1986 MeSH:D010013,MedGen:C0029434,Orphanet:ORPHA666,SNOMED CT:78314001 Osteogenesis imperfecta germline 17 50197027 CGAGGATTGCCCGGAACAGCTGGCCTCCCTGGAATGAAGGGACACAGAGTGAGTCACCTTT 587779622 107091 NM_000090.3(COL3A1):c.2645G>A (p.Gly882Asp) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189003771 CTGGCTTCCCTGGTGCTCGTGGTCTTCCTGGTCCTCCTGGTAGTAATGTAAGTAATTGTTA 1801176 27048 NM_000151.3(G6PC):c.248G>A (p.Arg83His) G6PC Dec 30, 2016 MedGen:C2919796,OMIM:232200 Glycogen storage disease type 1A germline;unknown 17 42903948 TGTTTTTCCATAGGATTCTCTTTGGACAGCGTCCATACTGGTGGGTTTTGGATACTGACTA 398124635 31515 NM_000146.3(FTL):c.-168G>A FTL Feb 19, 2013 MedGen:C1833213,OMIM:600886,Orphanet:ORPHA163 Hyperferritinemia cataract syndrome germline 19 48965340 CAGTTCGGCGGTCCCGCGGGTCTGTCTCTTGCTTCAACAGTGTTTGGACGGAACAGATCCG 121918573 28168 NM_000536.3(RAG2):c.1433G>A (p.Cys478Tyr) RAG2 Oct 04, 1996 MedGen:C1867362 Severe combined immunodeficiency, B cell-negative germline 11 36592736 ATCTGTCAGCAGGAAGCAACAAGTATTACTGCAATGAGCATGTGGAGATAGCAAGAGCTCT 730882160 181305 NM_001195129.1(PRSS56):c.709G>A (p.Gly237Arg) PRSS56 Jan 01, 2011 MedGen:C3150757,OMIM:613517 Microphthalmia, isolated 6 germline 2 232523062 ACCTGAGCCTTCCACCCCTTCCCTGCAGACGGGCCTGAGGCTGAAGCAGTGAGAGAGGCCC 63751105 96424 NM_000251.2(MSH2):c.2292G>A (p.Trp764Ter) MSH2 Sep 15, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Hereditary cancer-predisposing syndrome;Lynch syndrome germline 2 47478353 TTCTACCTACGATGGATTTGGGTTAGCATGGGCTATATCAGAATACATTGCAACAAAGATT 397507170 46846 NM_000060.4(BTD):c.184G>A (p.Val62Met) BTD Dec 04, 2012 MedGen:C0220754,OMIM:253260,Orphanet:ORPHA79241,SNOMED CT:8808004 Biotinidase deficiency not provided 3 15635563 CATCACGAGGCTGAATATTATGTGGCTGCCGTGTATGAGCATCCATCCATCCTGAGTCTGA 119468004 18675 NM_020247.4(COQ8A):c.1651G>A (p.Glu551Lys) COQ8A Oct 11, 2016 MedGen:C2677589,OMIM:612016,Orphanet:ORPHA139485;MedGen:C2677589,OMIM:612016,Orphanet:ORPHA139485 Coenzyme Q10 deficiency, primary, 4;Coenzyme Q10 deficiency, primary, 4 germline 1 226985332 TCCATAGAGATGAAGTTCCTCACCGGCTACGAGGTCAAGGTGAGCAGGGTTGCGGGGGATC 28929478 32828 NM_170665.3(ATP2A2):c.68G>A (p.Gly23Glu) ATP2A2 Aug 19, 2015 MedGen:C0022595,OMIM:124200,Orphanet:ORPHA218,SNOMED CT:48611009;MedGen:CN517202 Keratosis follicularis;not provided germline 12 110281857 TGGGCCACTTCGGCGTCAACGAGAGTACGGGGCTGAGCCTGGAACAGGTCAAGAAGCTTAA 786204753 186834 NM_000391.3(TPP1):c.1379G>A (p.Trp460Ter) TPP1 Aug 10, 2017 MedGen:C1876161,OMIM:204500,Orphanet:ORPHA228349;MedGen:C0027877,OMIM:214200,Orphanet:ORPHA216,SNOMED CT:42012007;MedGen:CN517202 Ceroid lipofuscinosis neuronal 2;Neuronal ceroid lipofuscinosis;not provided germline;unknown 11 6615217 CAGATGTGGCTGCACTTTCTGATGGCTACTGGGTGGTCAGCAACAGAGTGCCCATTCCATG 672601378 171803 NM_000834.4(GRIN2B):c.1619G>A (p.Arg540His) GRIN2B Jan 01, 2014 MedGen:C3151411,OMIM:613970 Mental retardation, autosomal dominant 6 germline 12 13615149 TAGAGACAGGCATCAGTGTCATGGTGTCACGCAGCAATGGGACTGTCTCACCTTCTGCCTT 879255553 247504 NM_145861.2(EDARADD):c.120+1G>A EDARADD Aug 09, 2016 MedGen:C3539920,OMIM:614941 Ectodermal dysplasia 11b, hypohidrotic/hair/tooth type, autosomal recessive germline 1 236409275 ACAGACCCTAGCACTTTATCCTTTAATATGGTAGGTGACAAATTTTACACTAATGGTGATA 80356513 21438 NM_001457.3(FLNB):c.4756G>A (p.Gly1586Arg) FLNB Oct 09, 2008 MedGen:C0175778,SNOMED CT:63387002;MedGen:C1835564,OMIM:150250 Larsen syndrome;Larsen syndrome, dominant type germline 3 58136063 TATGCTGTCACCTACATCCCCGACAAGACTGGGCGCTATATGATTGGAGTCACCTACGGGG 63750273 21613 NM_001171.5(ABCC6):c.3736-1G>A ABCC6 Jan 13, 2012 MedGen:C3276161,OMIM:614473;MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Generalized arterial calcification of infancy 2;Pseudoxanthoma elasticum germline 16 16157810 TCCTCTGACTCAGTTTCCCCTCCTGCTCCAGGCTCCCTGGAGGCTGCCCACATGTGCAGCT 587784200 168274 NM_022455.4(NSD1):c.6455G>A (p.Arg2152Gln) NSD1 Feb 08, 2013 MedGen:CN035106,OMIM:117550 Sotos syndrome 1 germline 5 177292150 ACCACGCAGACTGTCTCAATCTGACCAAGCGACCAGCAGGTTGGTGCCAAAATCCATTTGT 137853056 22081 NM_004562.2(PRKN):c.1358G>A (p.Trp453Ter) PRKN Sep 01, 2005 MedGen:C1868675,OMIM:600116 Parkinson disease 2 germline 6 161350139 TCGAGTGGTGCTGGAACTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGACCACTGGTT 111437558 390676 NM_000507.3(FBP1):c.825+1G>A FBP1 Mar 27, 2017 MedGen:C0016756,OMIM:229700,Orphanet:ORPHA348,SNOMED CT:28183005 Fructose-biphosphatase deficiency germline 9 94605456 CCCGCTAACAAGAAGAGCCCCAATGGAAAGGTAAGGGTGTCCCCTGGAGAGGGAGTGAGGA 587783763 170034 NM_000252.2(MTM1):c.1232G>A (p.Trp411Ter) MTM1 Feb 08, 2013 MedGen:C0410203,OMIM:310400,Orphanet:ORPHA596,SNOMED CT:46804001 Severe X-linked myotubular myopathy germline X 150657999 AAGGGTTCGAAATACTGGTACAAAAAGAATGGATAAGTTTTGGACATAAATTTGCATCTGT 121912777 32641 NM_001025195.1(CES1):c.428G>A (p.Gly143Glu) CES1 Jun 01, 2008 MedGen:CN071470 Carboxylesterase 1 deficiency germline 16 55823661 CTGCCCAGGTGATGGTGTGGATCCACGGAGGGGGGCTGATGGTGGGTGCGGCATCAACCTA 1064796593 407277 NM_000089.3(COL1A2):c.1702G>A (p.Gly568Ser) COL1A2 Feb 17, 2017 MedGen:CN517202 not provided germline 7 94414258 CCTGGCCCCTCAGGTCCCGCTGGTGAAGTTGGCAAACCAGGAGAAAGGGTGAGTAAAACAA 1057519073 359054 NM_019056.6(NDUFB11):c.391G>A (p.Glu131Lys) NDUFB11 Mar 16, 2017 MedGen:C1838979,OMIM:252010;MedGen:CN517202 Mitochondrial complex I deficiency;not provided germline X 47142418 ACTACCAGGATGAAAGAGTGGTCCCGCCGCGAAGCTGAGAGGCTTGTGAAATACCGAGAGG -1 441045 NM_000083.2(CLCN1):c.908G>A (p.Trp303Ter) CLCN1 Apr 07, 2015 MedGen:CN517202 not provided germline 7 143330826 CCTCCACCTACTTTGCTGTTCGGAACTACTGGAGAGGATTCTTTGCAGCCACGTTCAGCGC 606231469 171283 NM_015978.2(TNNI3K):c.1577G>A (p.Gly526Asp) TNNI3K Jan 29, 2015 MedGen:C4015285,OMIM:616117,Orphanet:ORPHA436242 Cardiac conduction disease with or without dilated cardiomyopathy germline 1 74369495 TCAATCATCCCTGCGTAATTCAGTTTGTGGGTGCTTGCTTGAATGATCCCAGCCAGTTTGC 137852722 76641 NM_024757.4(EHMT1):c.2868-1G>A EHMT1 May 07, 2015 MedGen:C0795833,OMIM:610253,Orphanet:ORPHA261494 Chromosome 9q deletion syndrome germline 9 137813005 ATGTTTTGTGGCCTTACATTTTCCCTTTTAGCCTCTTTCTTTCTCGGGATTCAGATGTCAC 886037957 259239 NM_017644.3(KLHL24):c.3G>A (p.Met1Ile) KLHL24 Jan 12, 2017 MedGen:C0079299,OMIM:131900,Orphanet:ORPHA79399,SNOMED CT:90496008;MedGen:C4310631,OMIM:617294 Epidermolysis bullosa simplex, Koebner type;Epidermolysis bullosa simplex, generalized, with scarring and hair loss germline;not applicable 3 183650359 AACAATTATATAGTCAACTGATGTAACAATGGTACTAATATTGGGACGCAGACTAAACAGA 33915217 30488 NM_000518.4(HBB):c.92+5G>A HBB Aug 06, 2014 MedGen:C3841475;MedGen:C0005283,OMIM:613985,Orphanet:ORPHA848,SNOMED CT:65959000 Beta-plus-thalassemia;beta Thalassemia germline;unknown 11 5226925 GAAGTTGGTGGTGAGGCCCTGGGCAGGTTGGTATCAAGGTTACAAGACAGGTTTAAGGAGA 200727689 181228 NM_000527.4(LDLR):c.502G>A (p.Asp168Asn) LDLR Jun 29, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000;MedGen:CN517202 Familial hypercholesterolemia;not provided germline;not applicable;unknown 19 11105408 TCCACCTGCATCCCCCAGCTGTGGGCCTGCGACAACGACCCCGACTGCGAAGATGGCTCGG 281875319 38820 NM_006907.3(PYCR1):c.743G>A (p.Gly248Glu) PYCR1 Dec 01, 2011 MedGen:C3280799,OMIM:614438,Orphanet:ORPHA293633;MedGen:CN517202 Autosomal recessive cutis laxa type 3B;not provided germline 17 81934380 CCATCCATGCCTTGCATGTGCTGGAGAGTGGGGGCTTCCGCTCCCTGCTCATCAACGCTGT 949249162 481713 NM_004453.3(ETFDH):c.171G>A (p.Trp57Ter) ETFDH Aug 08, 2016 MedGen:CN517202 not provided germline 4 158680603 TATTTATCCCCGGGATAAGGACAAGAGATGGGAAGGTAAGTAATAATTTGTGTACAATTCC 78310315 32855 NM_031226.2(CYP19A1):c.1310G>A (p.Cys437Tyr) CYP19A1 Dec 15, 1993 MedGen:C0878680,OMIM:613546,Orphanet:ORPHA91 Aromatase deficiency germline 15 51211010 TTCAGCCATTTGGCTTTGGGCCCCGTGGCTGTGCAGGAAAGTACATCGCCATGGTGATGAT 267606944 15255 NM_000285.3(PEPD):c.1234G>A (p.Glu412Lys) PEPD Dec 01, 2006 MedGen:C0268532,OMIM:170100 Prolidase deficiency germline 19 33388000 CACCTGCAGCCAGGCATGGTGCTCACCGTGGAGCCGGGCATCTACTTCATCGACCACCTCC 876661121 260220 NM_000214.2(JAG1):c.3048+1G>A JAG1 Apr 20, 2016 MedGen:CN517202 not provided germline 20 10641112 TCAGCGAACAATGAAATACATGTGGCCATTGTAAGTATAAGACCCATTCACACCTCATTAT 606231425 170963 NM_015506.2(MMACHC):c.464G>A (p.Gly155Glu) MMACHC Aug 01, 2013 MedGen:C1848561,OMIM:277400,Orphanet:ORPHA26 Methylmalonic acidemia with homocystinuria germline 1 45508830 TATCAGGTGTGTGCATACACCCCCGATTTGGGGGCTGGTTTGCCATCCGAGGGGTAGTGCT 137852358 25137 NM_000132.3(F8):c.6683G>A (p.Arg2228Gln) F8 Feb 01, 1990 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154861758 TGTTTGCCACCTGGTCTCCTTCAAAAGCTCGACTTCACCTCCAAGGGAGGAGTAATGCCTG 137852238 25624 NM_000133.3(F9):c.572G>A (p.Arg191His) F9 Nov 15, 1990 MedGen:C0008533,OMIM:306900,Orphanet:ORPHA98879,SNOMED CT:41788008 Hereditary factor IX deficiency disease germline X 139551113 TTTCTGTTTCACAAACTTCTAAGCTCACCCGTGCTGAGACTGTTTTTCCTGATGTGGACTA -1 433343 NM_000020.2(ACVRL1):c.525+1G>A ACVRL1 Oct 07, 2016 MedGen:CN169374 not specified germline 12 51913771 GCATCTGAGCAGGGCGACAGCATGTTGGGGGTATGGGCCTGGGGACCTGGGACACAGGGTG 121434289 18578 NM_130849.3(SLC39A4):c.1120G>A (p.Gly374Arg) SLC39A4 Jul 01, 2002 MedGen:C0221036,OMIM:201100,Orphanet:ORPHA37,SNOMED CT:37702000 Hereditary acrodermatitis enteropathica germline 8 144414291 TTCCTGAGCCTGGCAGTGGGTGCAGTCACTGGGGACGCTGTCCTGCATCTGACGCCCAAGG 201727231 260092 NM_001083614.1(EARS2):c.1547G>A (p.Arg516Gln) EARS2 Apr 22, 2015 MedGen:CN517202 not provided germline 16 23524396 TGGCCTTGGGACCAAAGGAAGTACGGGAACGGATCCAGAAGGTGGTTTCCAGCTAGGGAGA 267606741 32320 NM_000089.3(COL1A2):c.1262G>A (p.Gly421Asp) COL1A2 Jun 23, 2011 MedGen:C0268360,OMIM:166210,SNOMED CT:86470003 Osteogenesis imperfecta, recessive perinatal lethal germline 7 94411066 TTTTTTTTTTTTTTGAATAGGGCCCTCCTGGTAGTCGTGGTGCAAGTGGCCCTGCTGGAGT 587779696 107203 NM_000090.3(COL3A1):c.1096G>A (p.Gly366Arg) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188993406 GCAGGGTCTCCTGGTTCAAATGGTGCCCCTGGACAAAGAGGAGAACCTGGACCTCAGGGAC 587777792 166220 NM_006218.3(PIK3CA):c.652G>A (p.Glu218Lys) PIK3CA Jan 10, 2013 MedGen:C3554518,OMIM:615108 Cowden syndrome 5 germline 3 179201379 ACTCTGAAAATCAACCATGACTGTGTACCAGAACAAGTAATTGCTGAAGCAATCAGGAAAA 1064793161 405684 NM_004321.7(KIF1A):c.920G>A (p.Arg307Gln) KIF1A Aug 08, 2017 MedGen:C3280283,OMIM:614255;MedGen:CN517202 Mental retardation, autosomal dominant 9;not provided de novo;germline 2 240775889 AAAAGAAGAAGACAGATTTCATTCCGTACCGAGATTCCGTGTTGACCTGGCTCCTCCGGGA 869025272 222974 NM_177987.2(TUBB8):c.1249G>A (p.Asp417Asn) TUBB8 Mar 02, 2017 MedGen:C4225210,OMIM:616780 Oocyte maturation defect 2 germline 10 47143 GAATTCACCGAGGCCGAGAGCAACATGAACGACCTGGTGTCTGAATATCAGCAATATCAGG 886044841 269633 NM_005183.3(CACNA1F):c.2576+1G>A CACNA1F Jan 25, 2016 MedGen:C1848172,OMIM:300071 Congenital stationary night blindness, type 2A germline X 49219633 CGCCTTCTTCTGCCTCAGCCAAACCAACCCGTGAGTGCCGGAAGTGGCAGGGGGTGAGGCA 139093330 263644 NM_144772.2(NAXE):c.516+1G>A NAXE Nov 14, 2016 MedGen:C4310675,OMIM:617186 Encephalopathy, progressive, early-onset, with brain edema and/or leukoencephalopathy germline 1 156592671 ATCCCTTTCCTTGGGGAAATGCCCGCAGAGGTAGGTGGCTCCAGTTGAATACCTCCATCCT -1 482129 NM_000267.3(NF1):c.6162G>A (p.Trp2054Ter) NF1 Nov 28, 2017 MedGen:CN517202 not provided germline 17 31336712 AACTCCTACTTTAGAACAACATCTTATGTGGGATGATATTGCTATTTTAGCACGCTACATG 797045002 215062 NM_183357.2(ADCY5):c.2088+1G>A ADCY5 Dec 17, 2015 MedGen:C1847627,OMIM:606703,Orphanet:ORPHA324588 Dyskinesia, familial, with facial myokymia germline 3 123325321 AACCAGGTGTCCAAGGAGATGAAGCGGATGGTGAGTGGCTGGTGGGGCAGCCTGTGGGCAA 1114167416 413949 NM_000089.3(COL1A2):c.326G>A (p.Gly109Asp) COL1A2 - MedGen:C0023931,OMIM:166200,SNOMED CT:385482004 Osteogenesis imperfecta type I maternal 7 94404694 TGGAGTATGACATTCTTTTTTTCTTTTAGGGCCCTCAAGGTTTCCAAGGACCTGCTGGTGA -1 438556 NM_018890.3(RAC1):c.151G>A (p.Val51Met) RAC1 Oct 31, 2017 MedGen:CN580791,OMIM:617751 MENTAL RETARDATION, AUTOSOMAL DOMINANT 48 germline 7 6391967 TCTGCCAATGTTATGGTAGATGGAAAACCGGTGAATCTGGGCTTATGGGATACAGCTGGAC 137853342 23863 NM_001039.3(SCNN1G):c.1718G>A (p.Trp573Ter) SCNN1G Sep 01, 1995 MedGen:C0221043,OMIM:177200,Orphanet:ORPHA526,SNOMED CT:71275003 Pseudoprimary hyperaldosteronism germline 16 23215237 GCCGCCAGTGGCAGAAAGCCAAGGAGTGGTGGGCCTGGAAACAGGCTCCCCCATGTCCAGA 119481080 19920 NM_000197.1(HSD17B3):c.803G>A (p.Cys268Tyr) HSD17B3 Feb 01, 2001 MedGen:C0268296,OMIM:264300,Orphanet:ORPHA752,SNOMED CT:50658006 Testosterone 17-beta-dehydrogenase deficiency germline 9 96240777 ATGTCACAATTGGAGGTGAAACCTGTGGCTGCCTTGCCCATGAAATCTTGGTAATTGATAA 771623994 264590 NM_002693.2(POLG):c.1433+1G>A POLG Nov 17, 2016 MedGen:CN517202 not provided germline 15 89327166 TGATGCCTGCCAGCTGCTCTCAGGAGAGAGGTAGCCAGGCCTTGGGTGGGCAGGATCTAGG 200407856 177556 NM_001080522.2(CC2D2A):c.1017+1G>A CC2D2A Jul 01, 2015 Human Phenotype Ontology:HP:0002335,MedGen:C0431399,Orphanet:ORPHA475,SNOMED CT:253175003,SNOMED CT:716997004;MedGen:C2676788,OMIM:612285 Joubert syndrome;Joubert syndrome 9 germline;unknown 4 15516005 ATGGAGAACAGATTGCTGATGCAGGACCCCGTAAGTGTGCACCCTCTGCTCTCAGGTGTAG 121918057 15105 NM_000374.4(UROD):c.842G>A (p.Gly281Glu) UROD Sep 08, 2016 MedGen:C0268323,OMIM:176100,SNOMED CT:59229005;MedGen:C0162569;MedGen:C0162566,Orphanet:ORPHA101330,SNOMED CT:61860000 Familial porphyria cutanea tarda;Hepatoerythropoietic porphyria;Porphyria cutanea tarda germline 1 45014803 AGCTGGCCCAAGCTGGCTATGAGGTGGTTGGGCTTGACTGGACAGTGGCCCCAAAGAAAGC 527236150 152919 NM_000334.4(SCN4A):c.3404G>A (p.Arg1135His) SCN4A Mar 10, 2016 MedGen:C2750061,OMIM:613345;MedGen:CN517202 Hypokalemic periodic paralysis, type 2;not provided germline 17 63947082 TCAAATCCCTGCGGACACTGCGGGCCCTGCGTCCCCTGAGGGCACTGTCCCGATTCGAGGG 587779143 96423 NM_000251.2(MSH2):c.2291G>A (p.Trp764Ter) MSH2 Mar 19, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Hereditary cancer-predisposing syndrome;Lynch syndrome germline 2 47478352 CTTCTACCTACGATGGATTTGGGTTAGCATGGGCTATATCAGAATACATTGCAACAAAGAT 141982812 21159 NM_001075098.3(MOCS1):c.418+1G>A MOCS1 Apr 01, 1999 MedGen:C1854988,OMIM:252150,Orphanet:ORPHA308386 Molybdenum cofactor deficiency, complementation group A germline 6 39925677 TTATCCGGCCGGACGTGGTGGACATTGTGGGTGAGTTGGACGAAAGTCATCGCCACTTCTC 587779446 106880 NM_000090.3(COL3A1):c.556G>A (p.Gly186Ser) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188988108 CAGGGCCCCCCAGGCCCTCCCGGTCCCCCTGGTACATCTGGTCATCCTGGTTCCCCTGTAA 398123052 76348 NM_032957.4(RTEL1):c.1933G>A (p.Ala645Thr) RTEL1 Apr 01, 2013 MedGen:C3808802 Dyskeratosis congenita, autosomal dominant, 4 germline 20 63689115 GCCCCTGGGTCCACCGGCGCCACCTTCCTGGCGGTCTGCCGGGGCAAGGTGAGCTCTCCAG 886041935 264521 NM_001844.4(COL2A1):c.1996-1G>A COL2A1 Aug 23, 2016 MedGen:CN517202 not provided germline 12 47983439 CTTTGCTAACGCTTGTCACTTCGGCTTCTAGGGACTTCCTGGCCCTCCTGGTCCCCCAGGT 137852314 25406 NM_000402.4(G6PD):c.577G>A (p.Gly193Ser) G6PD May 24, 2017 MedGen:C2720289,OMIM:300908,Orphanet:ORPHA466026;na;MedGen:CN169374 Anemia, nonspherocytic hemolytic, due to G6PD deficiency;G6PD MAHIDOL;not specified germline X 154534495 GGGGTAACGCAGCTCCGGGCTCCCAGCAGAGGCTGGAACCGCATCATCGTGGAGAAGCCCT 397515241 76261 NM_000548.4(TSC2):c.2113G>A (p.Val705Met) TSC2 Jun 01, 2017 MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000;MedGen:CN517202 Tuberous sclerosis syndrome;not provided germline 16 2072256 CTCCTCTCCTCGCAGGAGTCTGACTGGAAGGTGCTGAAGCTGGTTCTGGGCAGGCTGCCTG 587778838 132314 NM_000321.2(RB1):c.2490-1G>A RB1 Sep 16, 2013 Human Phenotype Ontology:HP:0009919,MeSH:D012175,MedGen:C0035335,OMIM:180200,Orphanet:ORPHA790 Retinoblastoma somatic 13 48473359 TACTAATTGGTATTTCATCTTAACTTGACAGAATCTTAGTATCAATTGGTGAATCATTCGG 373697663 359828 NM_000048.3(ASL):c.578G>A (p.Arg193Gln) ASL Nov 11, 2016 MedGen:CN517202 not provided germline 7 66086797 ACTCTGAGCGGCTGCTGGAGGTGCGGAAGCGGATCAATGTCCTGCCCCTGGGGAGGTGGGT 104886219 35944 NM_000495.4(COL4A5):c.3196G>A (p.Gly1066Ser) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108626299 CCAGGATTACCTGGACAGAAAGGCGACAAAGGTGATCCTGGTATTTCAAGCATTGGTCTTC 1064793672 408412 NM_130799.2(MEN1):c.446-1G>A MEN1 May 22, 2015 MedGen:CN517202 not provided germline 11 64808100 GACCCTCTTTCATTACCTCCCCCTTCCACAGGCACCAAATTGGACAGCTCCGGTGTGGCCT 1057524476 367974 NM_006846.3(SPINK5):c.2667-1G>A SPINK5 Jan 18, 2017 MedGen:CN517202 not provided germline 5 148124764 TACCCTATCTTTTTTTTTAATTATTCTGCAGTGATCGAGAAGCTAATGAAAGAAAAAAGAA -1 442723 NM_001791.3(CDC42):c.203G>A (p.Arg68Gln) CDC42 Nov 01, 2017 MedGen:CN517202 not provided de novo;germline 1 22086463 TTCTAGGGCAAGAGGATTATGACAGATTACGACCGCTGAGTTATCCACAAACAGATGTATT 794726861 190163 NM_006744.3(RBP4):c.223G>A (p.Ala75Thr) RBP4 Apr 23, 2015 MedGen:C4225330,OMIM:616428 Microphthalmia, isolated, with coloboma 10 germline 10 93600692 GTGGACGAGACCGGCCAGATGAGCGCCACAGCCAAGGGCCGAGTCCGTCTTTTGAAGTCAG 768643552 223281 NM_015160.2(PMPCA):c.1066G>A (p.Gly356Ser) PMPCA Jan 22, 2016 Human Phenotype Ontology:HP:0001488,MedGen:C1865916;Human Phenotype Ontology:HP:0000618,MedGen:C0456909;Human Phenotype Ontology:HP:0004925,MedGen:C1839437;Human Phenotype Ontology:HP:0100275,MedGen:C1854699;Human Phenotype Ontology:HP:0001508,MedGen:C0231246;Human Phenotype Ontology:HP:0002283,MedGen:C0241816;Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569;Human Phenotype Ontology:HP:0002791,MedGen:C3203358;Human Phenotype Ontology:HP:0008947,MedGen:C1860834;Human Phenotype Ontology:HP:0002343,MedGen:C0020258,OMIM:236690,Orphanet:ORPHA314928,SNOMED CT:30753002;Human Phenotype Ontology:HP:0000648,MedGen:C0029124;Human Phenotype Ontology:HP:0007936,MedGen:C2675435;Human Phenotype Ontology:HP:0011344,MedGen:C1854919 Bilateral ptosis;Blindness;Chronic lactic acidosis;Diffuse cerebellar atrophy;Failure to thrive;Global brain atrophy;Hypertrophic cardiomyopathy;Hypoventilation;Infantile muscular hypotonia;Normal pressure hydrocephalus;Optic atrophy;Restrictive external ophthalmoplegia;Severe global developmental delay germline 9 136418630 GGAGGTGGCTCCTTCTCGGCTGGTGGGCCCGGCAAGGGCATGTTCTCCAGGCTCTACCTCA 886039897 260843 NM_019023.2(PRMT7):c.1276-1G>A PRMT7 Oct 17, 2016 MedGen:C4310689,OMIM:617157,Orphanet:ORPHA464288 Short stature, brachydactyly, intellectual developmental disability, and seizures germline 16 68347630 CTTACAACTAATAGCGTGGTGTTCCCTCTAGGTGTTTACAGTCGAGAGTTCAGCAGCTTCT 281865096 33862 NM_032383.4(HPS3):c.2888-1612G>A CP;HPS3 Oct 11, 2012 MedGen:C3888001,OMIM:614072 Hermansky-Pudlak syndrome 3 not provided 3 149170483 TGCATCATTGTATTTTAGCTTAATTTTCACGGGAACTGTGGAAGCTAGCAGACAGTACCAC 587779480 106920 NM_000090.3(COL3A1):c.3255+1G>A (p.Gly1068_Pro1085del) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189006991 CCCGGTCCTGCTGGTTCCCGAGGTGCTCCTGTAAGTTTTGTCATTTTTTGGTTTTATTTTG 387907231 44208 NM_004625.3(WNT7A):c.610G>A (p.Gly204Ser) WNT7A Mar 15, 2016 MedGen:C1848651,OMIM:276820;MedGen:CN517202 Ulna and fibula absence of with severe limb deficiency;not provided germline 3 13819384 GAGAACATGAAGCTGGAATGTAAGTGCCACGGCGTGTCAGGCTCGTGCACCACCAAGACGT 397507546 49031 NM_002834.4(PTPN11):c.1508G>A (p.Gly503Glu) PTPN11 Jan 25, 2017 MedGen:CN166718,Orphanet:ORPHA98733;MedGen:CN517202 Rasopathy;not provided germline 12 112489084 CCATCCAGATGGTGCGGTCTCAGAGGTCAGGGATGGTCCAGACAGAAGCACAGTACCGATT 121434610 26663 NM_004595.4(SMS):c.166G>A (p.Gly56Ser) SMS Nov 30, 2015 MeSH:D030342,MedGen:C0950123;MedGen:C0796160,OMIM:309583,Orphanet:ORPHA3063;MedGen:CN517202 Inborn genetic diseases;Snyder Robinson syndrome;not provided germline X 21967312 GGCTATTTAGCAACCTACACAAACAAGAACGGCAGGTGAGCAGTCTCCAGTGCTGTTCTTC 1131692320 424568 NM_000088.3(COL1A1):c.3443G>A (p.Gly1148Asp) COL1A1 Nov 16, 2016 MedGen:C0268362,OMIM:259420,Orphanet:ORPHA216812,SNOMED CT:385483009 Osteogenesis imperfecta type III unknown 17 50187103 CCCCACTCCAGGGTCCCCCTGGCTCTGCTGGTGCTCCTGGCAAAGATGGACTCAACGGTCT -1 442454 NM_000166.5(GJB1):c.622G>A (p.Glu208Lys) GJB1 Jan 30, 2017 MedGen:CN517202 not provided germline X 71224329 TCTGGCATCTGCATCATCCTCAATGTGGCCGAGGTGGTGTACCTCATCATCCGGGCCTGTG 121917850 24179 NM_000370.3(TTPA):c.575G>A (p.Arg192His) TTPA Jun 27, 2013 MedGen:C1848533,OMIM:277460,Orphanet:ORPHA96;MedGen:C4016662 Ataxia with vitamin E deficiency;Ataxia, Friedreich-like, with isolated vitamin E deficiency germline 8 63064294 TTCAAAAGGATTCATTTCCATTGAAAGTTCGTGGCATCCATTTGATAAATGAACCAGTAAT 587777310 132587 NM_003165.3(STXBP1):c.847G>A (p.Glu283Lys) STXBP1 Jun 19, 2017 MedGen:C0393706,Orphanet:ORPHA1934;MedGen:C2677326,OMIM:612164;MedGen:CN517202 Early infantile epileptic encephalopathy;Early infantile epileptic encephalopathy 4;not provided germline 9 127668132 GAGGCACGGGTGAAGGAGGTGCTCCTGGACGAGGACGACGACCTGTGGATAGCACTGCGCC 863225037 213796 NM_001165963.1(SCN1A):c.5436G>A (p.Trp1812Ter) SCN1A Nov 25, 2014 MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002 Severe myoclonic epilepsy in infancy germline 2 165991839 GGATGACTTTGAGATGTTCTATGAGGTTTGGGAGAAGTTTGATCCCGATGCAACTCAGTTC 118192151 76896 NM_000540.2(RYR1):c.14678G>A (p.Arg4893Gln) RYR1 Jan 06, 2017 MedGen:C0751951,OMIM:117000,Orphanet:ORPHA597,SNOMED CT:43152001;MedGen:CN517202 Central core disease;not provided germline;unknown 19 38584974 GTTACCTGTTTCACATGTACGTGGGTGTCCGGGCTGGCGGAGGCATTGGGGACGAGATCGA 104886091 25502 NM_000495.4(COL4A5):c.974G>A (p.Gly325Glu) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive germline X 108582921 CTGGTGATCCTGGTTACCCTGGTGAACCCGGAAGGGATGGTGAAAAGGTAAGAATTTTAAT 281864980 47638 NM_024312.4(GNPTAB):c.1514G>A (p.Cys505Tyr) GNPTAB May 10, 2012 MedGen:C0033788,OMIM:252600,Orphanet:ORPHA423461,SNOMED CT:65764006 Pseudo-Hurler polydystrophy not provided 12 101766189 TTGGTGGAGGAATAAACAGTGTCTCTTACTGTAATCAGGGATGTGCGAATTCCTGGCTCGC 1057518738 359075 NM_012186.2(FOXE3):c.307G>A (p.Glu103Lys) FOXE3 Jan 06, 2018 Gene:100302720,MedGen:C2751822,OMIM:612968 Cataract 34, multiple types germline 1 47416622 ACGCTGGCCGCCATCTACCGCTTCATCACCGAACGCTTTGCCTTCTACCGCGACAGCCCGC 111033404 52341 NM_000260.3(MYO7A):c.2094+1G>A MYO7A Dec 23, 2010 MedGen:C1568247,OMIM:276900,Orphanet:ORPHA231169 Usher syndrome, type 1 germline 11 77174915 CTGCCAGGTGTGAAGCCGGCCTACAAGCAGGTACAGGGCTGAGTGCACAGAGGGCAGGAGG 121918308 20427 NM_015713.4(RRM2B):c.580G>A (p.Glu194Lys) RRM2B Apr 17, 2014 MedGen:C2749861,OMIM:612075,Orphanet:ORPHA255235;MedGen:CN187502 Mitochondrial DNA depletion syndrome, encephalomyopathic form, with renal tubulopathy;RRM2B-related mitochondrial disease germline 8 102218918 GGGGAAAGAGTGGTGGCCTTTGCTGCTGTAGAAGGAGTTTTCTTCTCAGGATCTTTTGCTG 886042106 265416 NM_004006.2(DMD):c.31+36947G>A DMD Sep 15, 2015 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009;MedGen:C3668940,OMIM:302045;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Becker muscular dystrophy;Dilated cardiomyopathy 3B;Duchenne muscular dystrophy germline X 33174335 AAAATTACTCTTTCTCTTCCTTGGTTTTGCGGCTTCTCGAGTTCATAGGAGACTTTCAGTT 786205245 15591 NM_000140.3(FECH):c.1077+1G>A FECH May 01, 1993 MedGen:C0162568,OMIM:177000,Orphanet:ORPHA79278,SNOMED CT:51022005 Erythropoietic protoporphyria germline 18 57554259 ATCGAGTACTCTCAAGTTTTAGCCAAGGAGGTAAATGCACCCATCTGCCTTTTTCCCATCA 762913101 361783 NM_016011.4(MECR):c.695G>A (p.Gly232Glu) MECR Aug 09, 2017 MedGen:C4310634,OMIM:617282;MedGen:CN517202 Dystonia, childhood-onset, with optic atrophy and basal ganglia abnormalities;not provided germline 1 29202004 AGAAGCTGAGTGACAGACTGAAGAGTCTGGGGGCTGAGCATGTCATCACAGAAGAGGAGCT 121908033 18765 NM_000527.4(LDLR):c.523G>A (p.Asp175Asn) LDLR Mar 30, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11105429 TGGGCCTGCGACAACGACCCCGACTGCGAAGATGGCTCGGATGAGTGGCCGCAGCGCTGTA 104886240 35983 NM_000495.4(COL4A5):c.3535G>A (p.Gly1179Arg) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108666576 CCCGGTCAAGATGGTATTCCTGGACCAGCTGGACAGAAGGGTGAACCAGGTGCTGTAGTTT -1 443943 NM_001069.2(TUBB2A):c.580G>A (p.Glu194Lys) TUBB2A Sep 19, 2017 MedGen:CN517202 not provided germline 6 3154621 AACGCCACCCTCTCTGTCCACCAGCTGGTGGAAAACACAGATGAAACCTACTCCATTGATA 80338899 26912 NM_000137.2(FAH):c.786G>A (p.Trp262Ter) FAH Dec 21, 2015 MedGen:C0268490,OMIM:276700,Orphanet:ORPHA882,SNOMED CT:124536006,SNOMED CT:410056006 Tyrosinemia type I germline;unknown 15 80173093 GAAGAGTTTTGGGACCACTGTCTCTCCGTGGGTGGTGCCCATGGATGCTCTCATGCCCTTT 730880305 19917 NM_000197.1(HSD17B3):c.607-1G>A HSD17B3 Feb 01, 1998 MedGen:C0268296,OMIM:264300,Orphanet:ORPHA752,SNOMED CT:50658006 Testosterone 17-beta-dehydrogenase deficiency germline 9 96244395 GGGCCTCAGGTGTCTCTCCTTCTTGCTCCAGGCGTTTGTGTGCGCATTTTCCAAGGCCCTG 397516072 51960 NM_000256.3(MYBPC3):c.772+1G>A MYBPC3 Jun 27, 2017 MedGen:CN230736;Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005 Cardiovascular phenotype;Hypertrophic cardiomyopathy;Primary familial hypertrophic cardiomyopathy germline 11 47348423 ACTGCTCCAACTTCAATCTCACTGTCCACGGTGAGGGGGCCCTGGTGTCTGTCCTGGGCTC 137853157 23791 NM_000338.2(SLC12A1):c.1942G>A (p.Asp648Asn) SLC12A1 Jun 01, 1996 MedGen:C1866495,OMIM:601678 Bartter syndrome, type 1, antenatal germline 15 48251770 CTTTACGTCTATGTGACTTGTAAGAAGCCAGGTAAGATAATGACTGTCTGGAATAGCGTTT 267607148 33473 NM_021625.4(TRPV4):c.832G>A (p.Glu278Lys) TRPV4 Apr 02, 2014 MedGen:C0027868,Orphanet:ORPHA68381;Human Phenotype Ontology:HP:0002652,MedGen:C0410528,SNOMED CT:105986008;MedGen:C0265280,OMIM:184252,Orphanet:ORPHA93314 Neuromuscular Diseases;Skeletal dysplasia;Spondylometaphyseal dysplasia, Kozlowski type germline 12 109800639 GCCCGTGGGCGCTTCTTCCAGCCCAAGGATGAGGGGGGCTACTTCTACTTTGGTAAGGAGG 121908136 19461 NM_031475.2(ESPN):c.2321G>A (p.Arg774Gln) ESPN Feb 01, 2006 MedGen:CN068820 Deafness, without vestibular involvement, autosomal dominant germline 1 6452092 TGAAGATGCAGGAGGAGGAGGAGCAGAGGCGGAAGGTGGGTGGGGCGGGGTGCCCAGGGAG 587779770 132661 NM_001101.4(ACTB):c.220G>A (p.Gly74Ser) ACTB May 03, 2016 MedGen:C1855722,OMIM:243310,OMIM:608578,Orphanet:ORPHA2995;MedGen:CN517202 Baraitser-Winter syndrome 1;not provided germline 7 5529304 ATCCTCACCCTGAAGTACCCCATCGAGCACGGCATCGTCACCAACTGGGACGACATGGAGA 794727569 194031 NM_017780.3(CHD7):c.6995G>A (p.Trp2332Ter) CHD7 Jun 17, 2014 MedGen:C0265354,OMIM:214800,Orphanet:ORPHA138,SNOMED CT:47535005 CHARGE association germline 8 60856033 ACATCTGTGAAGCAGTGTTGAAAGGCAAATGGCCAGTAAATAGGCGCCAGATGTTTGATTT 80356726 20275 NM_007375.3(TARDBP):c.943G>A (p.Ala315Thr) TARDBP Mar 12, 2015 MedGen:C2677565,OMIM:612069 Amyotrophic lateral sclerosis type 10 germline 1 11022352 AGTAATATGGGTGGTGGGATGAACTTTGGTGCGTTCAGCATTAATCCAGCCATGATGGCTG 151317754 267008 NM_001130987.1(DYSF):c.2409+1G>A DYSF Aug 17, 2015 MedGen:C1850889,OMIM:253601,Orphanet:ORPHA268;MedGen:C1850808,OMIM:254130,Orphanet:ORPHA45448 Limb-girdle muscular dystrophy, type 2B;Miyoshi muscular dystrophy 1 germline 2 71561945 CTCCTGCGTCTGCGTGCCCTGGCAGAGGAGGTAATTAAGCCTGGGGGTGCCTTTCTTCTTC 1131691176 421052 NM_004329.2(BMPR1A):c.458G>A (p.Trp153Ter) BMPR1A Feb 15, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 10 86900054 CAGGTCCGTTTTTTGATGGCAGCATTCGATGGCTGGTTTTGCTCATTTCTATGGCTGTCTG 28940270 17896 NM_173076.2(ABCA12):c.4541G>A (p.Arg1514His) ABCA12 Sep 15, 2003 MedGen:C1832550,OMIM:601277 Autosomal recessive congenital ichthyosis 4A germline 2 214982225 AACCATCTACTGGAGTTGACCCATGTTCTCGCCGAAGTATATGGGATGTTATATCCAAGAA 752513525 136391 NM_015965.6(NDUFA13):c.170G>A (p.Arg57His) NDUFA13 Feb 13, 2018 MedGen:C1838979,OMIM:252010 Mitochondrial complex I deficiency biparental;germline 19 19526257 ACTGGAGCATAATGAAGTGGAACCGTGAGCGCAGGTAGGGCCCCTGGTGGGCGTTGTCTGA 786205005 187405 NM_005249.4(FOXG1):c.577G>A (p.Ala193Thr) FOXG1 Jun 19, 2017 MedGen:C3150705,OMIM:613454 Rett syndrome, congenital variant de novo;germline 14 28767856 CCGTTCAGCTACAACGCGCTCATCATGATGGCCATCCGGCAGAGCCCCGAGAAGCGGCTCA 74315507 22614 NM_002872.4(RAC2):c.169G>A (p.Asp57Asn) RAC2 Sep 01, 2000 MedGen:C1842398,OMIM:608203,Orphanet:ORPHA183707 Neutrophil immunodeficiency syndrome germline 22 37232857 GACAGCAAGCCAGTGAACCTGGGGCTGTGGGACACTGCTGGGCAGGAGGACTACGACCGTC 1085307707 415118 NM_000089.3(COL1A2):c.2891G>A (p.Gly964Asp) COL1A2 Apr 11, 2017 MedGen:CN517202 not provided germline 7 94425805 TTGGTCCCGTTGGTGCTGCAGGTGCACCTGGTCCTCATGGCCCCGTGGGTCCTGCTGGCAA 587777256 130983 NM_001080442.2(SLC38A8):c.1234G>A (p.Gly412Arg) SLC38A8 Dec 05, 2013 na FOVEAL HYPOPLASIA 2 WITH OPTIC NERVE MISROUTING germline 16 84009858 TCACTTGGCAGGTGCTGCCTGGAGGTCTGGGGAGTGGTCTCTGTGCTGGTCGGCACCTTCA 118203885 24612 m.583G>A MT-TF Oct 01, 1998 MedGen:C0162671,OMIM:540000,Orphanet:ORPHA550,SNOMED CT:39925003 Juvenile myopathy, encephalopathy, lactic acidosis AND stroke germline MT 583 CAAACCCCAAAGACACCCCCCACAGTTTATGTAGCTTACCTCCTCAAAGCAATACACTGAA 28936415 22745 NM_000303.2(PMM2):c.422G>A (p.Arg141His) PMM2 Oct 16, 2017 MedGen:C0349653,OMIM:212065,Orphanet:ORPHA79318,SNOMED CT:277893002;MedGen:C0282577,Orphanet:ORPHA137,SNOMED CT:238049009;MedGen:CN517202 Carbohydrate-deficient glycoprotein syndrome type I;Congenital disorder of glycosylation;not provided germline;inherited;unknown 16 8811153 CTATTGGAAGAAGCTGCAGCCAAGAAGAACGCATTGAGTTCTACGAACTCGATAAAGTACG 369982920 214899 NM_000282.3(PCCA):c.2040G>A (p.Ala680=) PCCA Jan 01, 2012 Human Phenotype Ontology:HP:0003353,MedGen:C0268579,OMIM:606054,Orphanet:ORPHA35 Propionic acidemia germline 13 100515567 GGTGGCCGTCTCTGTCAAGCCTGGAGACGCGGTAAGGGCTGTGTGTGTCTCTCTGCAGGAC -1 430203 NM_000540.2(RYR1):c.6127+1G>A RYR1 Sep 25, 2015 MedGen:CN517202 not provided germline 19 38490733 ACTTTCATCAAGACCTGCTGGCACACTGTGGTAAGGAGTGGGGATCAGAGAGTCCTCCCCA -1 473983 NM_000038.5(APC):c.7512G>A (p.Trp2504Ter) APC Jan 29, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 5 112843106 CACACATTCGTCTGTTCAGGCTGGTGGATGGCGAAAACTCCCACCTAATCTCAGTCCCACT 387906610 38599 NM_001849.3(COL6A2):c.2611G>A (p.Asp871Asn) COL6A2 Sep 23, 2015 na;MedGen:CN029274,OMIM:158810 BETHLEM MYOPATHY 1, AUTOSOMAL RECESSIVE;Bethlem myopathy 1 germline 21 46132103 CGGCGGCTGACGCTGGCCCGGAGGGACGACGACCCTCTCAACGCACGCGTGGCGCTGCTGC 80338748 24493 NM_004525.2(LRP2):c.8452+1G>A LRP2 Jun 28, 2011 MedGen:C1857277,OMIM:222448,Orphanet:ORPHA2143 Donnai Barrow syndrome germline 2 169201627 ATAATAACACTTCAGATGAGAAAAATTGCCGTAAGTTTATCTTAAGTGCTTATTGTGATTT 121912616 16458 NM_001041.3(SI):c.3218G>A (p.Gly1073Asp) SI Jun 14, 2016 MedGen:C1283620,OMIM:222900,Orphanet:ORPHA35122,SNOMED CT:360854006,SNOMED CT:78373000 Sucrase-isomaltase deficiency germline;maternal 3 165021265 ATGATGTGGAAATCAAGGAAAATCCTTTTGGCATCCAGATTCGACGGAGAAGCAGTGGAAG 387907218 44181 NM_000116.4(TAZ):c.718G>A (p.Gly240Arg) TAZ Mar 27, 2017 MedGen:C0574083,OMIM:302060,Orphanet:ORPHA111,SNOMED CT:297231002;MedGen:CN517202 3-Methylglutaconic aciduria type 2;not provided germline X 154420676 GCCACCCCACAGAAAATCACTGTGCTGATCGGGAAGCCCTTCAGTGCCCTGCCTGTACTCG 587779482 106922 NM_000090.3(COL3A1):c.3508G>A (p.Gly1170Ser) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189008125 ATTGGACCACCAGGGCCTCGAGGTAACAGAGGTGAAAGAGGATCTGAGGTAAGACATCACT 121908698 133532 NM_007194.3(CHEK2):c.444+1G>A CHEK2 Aug 18, 2017 MedGen:C1858433;MedGen:CN068448;MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast and colorectal cancer, susceptibility to;Breast cancer, susceptibility to;Familial cancer of breast;Hereditary cancer-predisposing syndrome;not provided germline;unknown 22 28725242 TACAGCAAGAAACACTTTCGGATTTTCAGGGTAGGTAATGAATACCCATGTATCTAGGAGA 267606843 22672 NM_198407.2(GHSR):c.6G>A (p.Trp2Ter) GHSR Nov 01, 2009 MedGen:C1858656,OMIM:604271,OMIM:615925 Short stature, idiopathic, autosomal germline 3 172448408 GAGCCTGTTCAGCTGAGCCGGCAGCATGTGGAACGCGACGCCCAGCGAAGAGCCGGGGTTC 869312888 226686 NM_139276.2(STAT3):c.1261G>A (p.Gly421Arg) STAT3 Apr 11, 2017 MedGen:C4014795,OMIM:615952,Orphanet:ORPHA438159;MedGen:CN517202 Autoimmune disease, multisystem, infantile-onset, 1;not provided germline;inherited 17 42329430 CAGACCCTGAGGGAGCAGAGATGTGGGAATGGGGGCCGAGCCAATTGTGATGTAAGTTTTG 730880542 179312 NM_000256.3(MYBPC3):c.1457G>A (p.Trp486Ter) MYBPC3 Jul 31, 2017 MedGen:CN517202 not provided germline 11 47342830 AAGTATCGGAGGAGGGGGCGCAAGTCAAATGGTGAGTTCCAGAAGCACGGGGCATGGGTGT 72659319 213576 NM_000089.3(COL1A2):c.3034G>A (p.Gly1012Ser) COL1A2 Nov 05, 2013 MedGen:C0268362,OMIM:259420,Orphanet:ORPHA216812,SNOMED CT:385483009;MedGen:C0268363,OMIM:166220,Orphanet:ORPHA216820,SNOMED CT:205497004;MedGen:C0268363,OMIM:166220,Orphanet:ORPHA216820,SNOMED CT:205497004;MedGen:C0268360,OMIM:166210,SNOMED CT:86470003 Osteogenesis imperfecta type III;Osteogenesis imperfecta with normal sclerae, dominant form;Osteogenesis imperfecta with normal sclerae, dominant form;Osteogenesis imperfecta, recessive perinatal lethal unknown 7 94426459 CAAGGCATTCGTGGCGATAAGGGAGAGCCCGGTGAAAAGGGGCCCAGAGGTCTTCCTGGCT 386134141 51321 NM_000096.3(CP):c.2879-1G>A CP Apr 18, 2013 MedGen:C0878682,OMIM:604290,Orphanet:ORPHA48818,SNOMED CT:124224004 Deficiency of ferroxidase not provided 3 149177980 AAAGTAACATAAAACCATATGCTTTCCCTAGCTATTAATGGAAGAATGTTTGGAAACCTAC 121918754 79501 NM_006920.4(SCN1A):c.2902G>A (p.Gly968Arg) SCN1A Aug 01, 2017 MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002;MedGen:CN517202 Severe myoclonic epilepsy in infancy;not provided germline 2 166037787 CTTACTGTCTTCATGATGGTCATGGTGATTGGAAACCTAGTGGTATGTACCCACTTAAGAT 72651646 32349 NM_000088.3(COL1A1):c.2156G>A (p.Gly719Asp) COL1A1 Jun 01, 1991 MedGen:C0268360,OMIM:166210,SNOMED CT:86470003 Osteogenesis imperfecta, recessive perinatal lethal germline 17 50191462 AGGGTGATGCTGGTGCCCCTGGAGCTCCCGGTAGCCAGGGCGCCCCTGGCCTTCAGGGAAT 180177189 200462 NM_000030.2(AGXT):c.283G>A (p.Glu95Lys) AGXT Nov 27, 2014 MedGen:C0268164,OMIM:259900,Orphanet:ORPHA93598,SNOMED CT:65520001 Primary hyperoxaluria, type I germline 2 240869287 GCCCTGGAGGCCGCCCTGGTCAATGTGCTGGAGCCTGGGGACTCCTTCCTGGTTGGGGCCA 386134223 36760 NM_003060.3(SLC22A5):c.1412G>A (p.Arg471His) SLC22A5 May 11, 2017 MedGen:C0342788,OMIM:212140,Orphanet:ORPHA158,SNOMED CT:21764004 Renal carnitine transport defect germline 5 132392577 TGGGTGTGGGAGTCAGCTCCACAGCATCCCGCCTGGGCAGCATCCTGTCTCCCTACTTCGT 111812550 447828 NM_001100.3(ACTA1):c.616+1G>A ACTA1 Mar 02, 2017 MedGen:C3711389,OMIM:161800,Orphanet:ORPHA98904 Nemaline myopathy 3 germline 1 229432269 CTGAGCGTGGCTACTCCTTCGTGACCACAGGTGCGCGGCGCCCCTGCACCCCGGGCGGGAG 372210292 270286 NM_000023.3(SGCA):c.409G>A (p.Glu137Lys) SGCA Sep 30, 2016 MedGen:C2936332,OMIM:608099,Orphanet:ORPHA62 Limb-girdle muscular dystrophy, type 2D germline 17 50168397 TTCCCAGGCCCCCTGCTGCCATACCAAGCCGAGTTCCTGGTGCGCAGCCACGATGCGGAGG -1 482123 NM_000267.3(NF1):c.2002-1G>A NF1 Dec 27, 2017 MedGen:CN517202 not provided germline 17 31226434 CAAATATATGTCTTCCACCCTTGACTCTCAGGATAGTGCAGCAGGATGCAGCGGAACCCCC 879253744 243961 NM_018076.4(ARMC4):c.2495+1G>A ARMC4 Apr 03, 2013 MedGen:C3809548,OMIM:615451 Primary ciliary dyskinesia 23 germline 10 27935009 TGCTTGTGCAGTAGAACCTGAAAGTATGATGTAAGTGGCCCTGGAGATGGAAAGATTTTAT 587780345 134590 NM_000162.3(GCK):c.544G>A (p.Val182Met) GCK Jul 27, 2017 Human Phenotype Ontology:HP:0005978,MedGen:C0011860,OMIM:125853,Orphanet:ORPHA181376,SNOMED CT:44054006;Human Phenotype Ontology:HP:0009800,MedGen:C0085207;MedGen:C1841962,OMIM:125851;MedGen:CN517202 Diabetes mellitus type 2;Diabetes mellitus, gestational;Maturity-onset diabetes of the young, type 2;not provided germline 7 44150004 AAGGCCTCAGGAGCAGAAGGGAACAATGTCGTGGGGCTTCTGCGAGACGCTATCAAACGGA 775925162 353979 NM_172107.3(KCNQ2):c.1641G>A (p.Arg547=) KCNQ2 Mar 31, 2016 MedGen:C3150986,OMIM:613720,Orphanet:ORPHA439218 Early infantile epileptic encephalopathy 7 germline 20 63413572 GCCCCACCCACCCCCCTGCAGTGTCATGCGGTTCCTGGTGTCCAAGCGGAAGTTCAAGGAG 121918566 28215 NM_000322.4(PRPH2):c.947G>A (p.Trp316Ter) PRPH2 Jan 01, 1997 MedGen:C1842914,OMIM:608161,Orphanet:ORPHA99000;MedGen:CN517202 Macular dystrophy, vitelliform, adult-onset;not provided germline 6 42698389 GGCTGCTGGAGAGGAGCGTGCCGGAGACCTGGAAGGCCTTTCTGGAGAGTGTGAAGAAGCT 121913378 53982 NM_004333.4(BRAF):c.1798G>A (p.Val600Met) BRAF Jul 14, 2015 Human Phenotype Ontology:HP:0002861,MeSH:D008545,MedGen:C0025202,SNOMED CT:2092003;Human Phenotype Ontology:HP:0030358,MeSH:D002289,MedGen:C0007131,SNOMED CT:254637007 Malignant melanoma;Non-small cell lung cancer somatic 7 140753337 GTAAAAATAGGTGATTTTGGTCTAGCTACAGTGAAATCTCGATGGAGTGGGTCCCATCAGT 786204280 186452 NM_000059.3(BRCA2):c.7008-1G>A BRCA2 Aug 17, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome germline 13 32354860 AATAAACTTATATATTTTCTCCCCATTGCAGCACAACTAAGGAACGTCAAGAGATACAGAA 121908755 22155 NM_000492.3(CFTR):c.1646G>A (p.Ser549Asn) CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008;MedGen:CN236562 Cystic fibrosis;ivacaftor response - Efficacy germline;unknown 7 117587800 TAGTTCTTGGAGAAGGTGGAATCACACTGAGTGGAGGTCAACGAGCAAGAATTTCTTTAGC -1 482171 NM_015559.2(SETBP1):c.821G>A (p.Trp274Ter) SETBP1 Nov 14, 2017 MedGen:CN517202 not provided germline 18 44950161 AGGGTAAGAAAGGCAGTGCAGGGAACACGTGGAGTCAGTTGTCTAACAATAACAAAGATCT 387906960 39591 NM_021939.3(FKBP10):c.344G>A (p.Arg115Gln) FKBP10 Jan 01, 2013 Gene:50963,MedGen:C1850168,OMIM:259450 Bruck syndrome 1 germline 17 41817156 GCCTCATGGGCATGTGTGTCAACGAGCGGCGACGCCTCATTGTGCCTCCCCACCTGGGCTA 1085308042 416935 NM_000314.6(PTEN):c.131G>A (p.Gly44Asp) PTEN Mar 01, 2017 MedGen:C1959582,OMIM:601728,Orphanet:ORPHA306498 PTEN hamartoma tumor syndrome unknown 10 87894076 CTATGGGATTTCCTGCAGAAAGACTTGAAGGCGTATACAGGAACAATATTGATGATGTAGT 386134171 51295 NM_002739.4(PRKCG):c.1078G>A (p.Gly360Ser) PRKCG Apr 18, 2013 MedGen:C1854369,OMIM:605361,Orphanet:ORPHA98763 Spinocerebellar ataxia 14 not provided 19 53898097 GACTTCAGCTTCCTCATGGTTCTAGGAAAAGGCAGTTTTGGGAAGGTTGGATTCCTGGGGT 121912981 31902 NM_000031.5(ALAD):c.823G>A (p.Val275Met) ALAD Jul 01, 1991 MedGen:C0268328,OMIM:612740,Orphanet:ORPHA95157,SNOMED CT:64081000 Porphobilinogen synthase deficiency germline 9 113389085 TCCCTGCAGCACCCTGACCTCCCTCTCGCCGTGTACCACGTCTCTGGAGAGTTTGCCATGC 886043170 269902 NM_001130987.1(DYSF):c.5004-1G>A DYSF Jan 14, 2016 MedGen:C1850889,OMIM:253601,Orphanet:ORPHA268;MedGen:C1850808,OMIM:254130,Orphanet:ORPHA45448;MedGen:C1847532,OMIM:606768,Orphanet:ORPHA178400 Limb-girdle muscular dystrophy, type 2B;Miyoshi muscular dystrophy 1;Myopathy, distal, with anterior tibial onset germline 2 71664267 GGCTGACATCGGGAATCTGCCCCTCCTGCAGGATGTTCGAGCTGACCTGCACTCTGCCTCT 80338944 32040 NM_004004.5(GJB2):c.231G>A (p.Trp77Ter) GJB2 Aug 13, 2014 MedGen:C2673759,OMIM:220290;MedGen:CN043648,Orphanet:ORPHA87884 Deafness, autosomal recessive 1A;Nonsyndromic hearing loss and deafness germline 13 20189351 CTACTTCCCCATCTCCCACATCCGGCTATGGGCCCTGCAGCTGATCTTCGTGTCCACGCCA 80358043 262992 NM_007294.3(BRCA1):c.134+1G>A BRCA1 Oct 02, 2015 MedGen:C2676676,OMIM:604370 Breast-ovarian cancer, familial 1 germline 17 43115725 CTCCACAAAGTGTGACCACATATTTTGCAAGTAAGTTTGAATGTGTTATGTGGCTCCATTA 72552727 21450 NM_003060.3(SLC22A5):c.396G>A (p.Trp132Ter) SLC22A5 Jun 22, 2014 MedGen:C0342788,OMIM:212140,Orphanet:ORPHA158,SNOMED CT:21764004 Renal carnitine transport defect germline;unknown 5 132378380 TGATACACCCCCTTTGCTCATCTTGCAGTGGAACCTGGTGTGTGAGGACGACTGGAAGGCC 587784469 169445 NM_001083962.1(TCF4):c.990G>A (p.Ser330=) TCF4 Aug 01, 2017 MedGen:C1970431,OMIM:610954,Orphanet:ORPHA2896;MedGen:CN517202 Pitt-Hopkins syndrome;not provided de novo;germline 18 55261466 TGGAGATGCTCTGGGGAAAGCACTTGCTTCGGTGAGGAAATATTGACTTTGGACTCCATAT 121908042 228132 NM_000527.4(LDLR):c.326G>A (p.Cys109Tyr) LDLR Sep 12, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000;MedGen:CN517202 Familial hypercholesterolemia;not provided germline 19 11105232 GCCCATCCATCCCTGCAGCCCCCAAGACGTGCTCCCAGGACGAGTTTCGCTGCCACGATGG 121912736 32837 NM_170665.3(ATP2A2):c.2305G>A (p.Gly769Arg) ATP2A2 Dec 20, 2016 MedGen:C1852297;MedGen:CN517202 Darier disease, segmental;not provided germline 12 110342435 TTCATCCGCTACCTCATCTCGTCCAACGTCGGGGAAGTTGTCTGGTAGGTCTCTGTGACAG 1057522040 378480 NM_006306.3(SMC1A):c.1504G>A (p.Glu502Lys) SMC1A Jun 28, 2017 MedGen:CN517202 not provided germline X 53409103 CAGGAGAGCAGCCGCCAGCAGCGAAAGGCAGAGATAATGGAAAGCATCAAGCGCCTTTACC 199971687 216058 NM_052845.3(MMAB):c.291-1G>A MMAB Jan 07, 2016 MedGen:C1855102,OMIM:251110,Orphanet:ORPHA79311 Methylmalonic aciduria cblB type germline 12 109565177 CAGGCAAATTCTTTTTCCTTTTTCTTCATAGGTTTGCTCTGGAATTAGTCACAGAAAAGGG 794726742 187815 NM_001165963.1(SCN1A):c.2213G>A (p.Trp738Ter) SCN1A Jan 11, 2018 MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002;MedGen:CN517202 Severe myoclonic epilepsy in infancy;not provided de novo;germline 2 166041433 AAGAATCCAGGCAGAAATGCCCACCCTGTTGGTATAAATTTTCCAACATATTCTTAATCTG 779082302 260016 NM_004572.3(PKP2):c.1511-1G>A PKP2 Aug 23, 2016 MedGen:CN517202 not provided germline 12 32841206 CTGTTTTCATGGTAACTCTGTGCTTTTCTAGGTTTGCTGTGGAATTTGTCATCTAATGACA -1 440142 NM_001080463.1(DYNC2H1):c.4553G>A (p.Cys1518Tyr) DYNC2H1 Jun 01, 2017 MedGen:C0265275,Orphanet:ORPHA474,SNOMED CT:75049004 Jeune thoracic dystrophy maternal 11 103163089 AGAAAACTTTGGAACAGTTGTTGAAGGAATGTGTTACTACTGGGCGAAGTTCTCAAGGTGC 397507389 46666 NM_000059.3(BRCA2):c.7618-1G>A BRCA2 Sep 19, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 2;Familial cancer of breast;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline;unknown 13 32357741 TTTCTTTTTTGTGTGTGTTTATTTTGTGTAGCTGTATACGTATGGCGTTTCTAAACATTGC 990457690 468162 NM_000080.3(CHRNE):c.-95G>A CHRNE Jun 13, 2017 Gene:8144,MedGen:C1853949,OMIM:605809 Myasthenic syndrome, congenital, 4a, slow-channel germline 17 4903158 GAGGATTAGGTGACAGTCCCCTAACAGCCCGGAACTAACACCCTCCTCCCCCTCACACAGG 386833651 70838 NM_000310.3(PPT1):c.536+1G>A PPT1 Jul 23, 2009 MedGen:C1850451,OMIM:256730,Orphanet:ORPHA228329;MedGen:C0027877,OMIM:214200,Orphanet:ORPHA216,SNOMED CT:42012007 Ceroid lipofuscinosis neuronal 1;Neuronal ceroid lipofuscinosis germline 1 40089409 TGGGGCGTACTCCAAAGTTGTTCAGGAACGGTATGTATGGTTAGCTGAAAAGATTACAGAC 121918353 22665 NM_000214.2(JAG1):c.701G>A (p.Cys234Tyr) JAG1 Jul 01, 2002 MedGen:C1866053 Deafness, congenital heart defects, and posterior embryotoxon germline 20 10656452 CACGCCCTTCTCTGTTTTTTACAGCTATTTGCCGACAAGGCTGCAGTCCTAAGCATGGGTC 201951824 198631 NM_001082971.1(DDC):c.1040G>A (p.Arg347Gln) DDC Aug 28, 2013 MedGen:C1291564,OMIM:608643,Orphanet:ORPHA35708,SNOMED CT:124600004 Deficiency of aromatic-L-amino-acid decarboxylase unknown 7 50476625 TCTTTTCTCCAGGGCTTATCACTGACTACCGGGTAAGTGGGAGATTCCACTGTAATCTCAA 1085307792 414915 NM_005677.3(COLQ):c.393+1G>A COLQ Apr 05, 2017 MedGen:CN517202 not provided germline 3 15478976 TAGGGGGAGCTTGGCCGACCAGGAAGGAAGGTATGGTCTGCGCTGTTCTGTGAGTGTCACA 201568579 177044 NM_000033.3(ABCD1):c.1661G>A (p.Arg554His) ABCD1 Dec 13, 2016 MedGen:C0162309,OMIM:300100,Orphanet:ORPHA43,SNOMED CT:65389002;MedGen:CN517202 Adrenoleukodystrophy;not provided germline X 153740600 ACAGGCCCTACATGTCTGTGGGCTCCCTGCGTGACCAGGTGATCTACCCGGACTCAGTGGA -1 482076 NM_001145358.1(SIN3A):c.2675G>A (p.Trp892Ter) SIN3A Dec 19, 2017 MedGen:CN517202 not provided germline 15 75392418 TATACAACCTCTTCTATGTCAACAACAACTGGTATATTTTTATGCGACTGCACCAGATTCT 878854342 23750 NG_011708.1:g.11963G>A FANCE Nov 01, 2000 MedGen:C3160739,OMIM:600901 Fanconi anemia, complementation group E germline 6 35459323 AAGAAAATAATTAATTTTTTCCTCCCTGTTGGCTGTAGATCCTCTCCTTGACTTCCTCAGC 121913068 31567 NM_000129.3(F13A1):c.1504G>A (p.Gly502Arg) F13A1 May 01, 1995 Human Phenotype Ontology:HP:0040233,MedGen:C2750514,OMIM:613225 Factor xiii, a subunit, deficiency of germline 6 6174823 AGATTGGCCCTAGAAACTGCCCTGATGTACGGAGCTAAAAAGCCCCTCAACACAGAAGGTG 281865496 47597 NM_004614.4(TK2):c.575G>A (p.Arg192Lys) TK2 May 18, 2017 MedGen:C3149750,OMIM:609560;MedGen:CN517202 Mitochondrial DNA depletion syndrome 2;not provided germline 16 66517179 TTCGGACCAATCCTGAGACTTGTTACCAGAGGTTAAAGAAGAGATGCAGGGAAGAGGAGAA 886041535 264414 NM_203447.3(DOCK8):c.2606-1G>A DOCK8 Dec 20, 2016 MedGen:CN517202 not provided germline 9 382512 TGTTGACATGTCTCTGCCTGGTGGGGTGCAGGCGCTCCCACTGCCCTCCTAGACCCTCGGA 137852525 25037 NM_000425.4(L1CAM):c.2254G>A (p.Val752Met) L1CAM Feb 15, 2002 MedGen:C4017784 Hydrocephalus, X-linked, with hirschsprung disease germline X 153866826 GACTGGAACGCCCCCCAGGTTCAGTACCGCGTGCAGTGGCGCCCTCAGGGGACACGAGGGC 794728595 196481 NM_170707.3(LMNA):c.1560G>A (p.Trp520Ter) LMNA May 25, 2016 MedGen:CN517202 not provided germline 1 156137184 CGACCTGGTGTGGAAGGCACAGAACACCTGGGGCTGCGGGAACAGCCTGCGTACGGCTCTC 267607004 15310 NM_001134363.2(RBM20):c.1907G>A (p.Arg636His) RBM20 Sep 26, 2017 MedGen:C2750995,OMIM:613172;EFO:EFO_0000407,Human Phenotype Ontology:HP:0001644,MedGen:C0007193,Orphanet:ORPHA217604,SNOMED CT:195021004;MedGen:CN517202 Dilated cardiomyopathy 1DD;Primary dilated cardiomyopathy;not provided germline;unknown 10 110812304 ACAGATATGGCCCAGAAAGGCCGCGGTCTCGTAGTCCGGTGAGCCGGTCACTCTCCCCGAG 121434278 18633 NM_000016.5(ACADM):c.583G>A (p.Gly195Arg) ACADM Jul 14, 2017 MedGen:C0220710,OMIM:201450,Orphanet:ORPHA42,SNOMED CT:128596003;MedGen:CN517202 Medium-chain acyl-coenzyme A dehydrogenase deficiency;not provided germline;unknown 1 75740094 ATTAATGGTCAGAAGATGTGGATAACCAACGGAGGAAAAGCTAATTGGTATGTTGTTCAAA -1 429845 NM_001077418.2(TMEM231):c.438+1G>A TMEM231 Jan 06, 2016 MedGen:C3809352,OMIM:615397 Meckel syndrome, type 11 germline 16 75545825 CTCATCCTGACTTTCTCCTATCGATTACACGTGAGTCAGTCCGCTGGGAGGCTGTCCTCTC 387906955 39578 NM_000153.3(GALC):c.121G>A (p.Gly41Ser) GALC Nov 01, 2011 MedGen:C0023521,OMIM:245200,Orphanet:ORPHA487,SNOMED CT:192782005 Galactosylceramide beta-galactosidase deficiency germline 14 87993044 TTGCTGCTGTGTGCGCTGCTGGCGCCCGGCGGCGCGTACGTGCTCGACGACTCCGACGGGC 1060501135 393562 NM_198056.2(SCN5A):c.2933G>A (p.Trp978Ter) SCN5A Apr 05, 2017 MedGen:C1142166,Orphanet:ORPHA130,SNOMED CT:418818005 Brugada syndrome germline 3 38581226 GGGGCCTGCGCTTTGTCAAGCGGACCACCTGGGATTTCTGCTGTGGTCTCCTGCGGCAGCG 797044508 178080 NM_001042537.1(SLC9A6):c.604-1G>A SLC9A6 Mar 07, 2014 MedGen:C2678194,OMIM:300243,Orphanet:ORPHA85278 Christianson syndrome germline X 135998481 TCTAACAGTGTAACTTTTTTTTTTTTGTCAGAGACATTTTTTTCGAAATCTTGGGTCTATC 483352916 94412 NM_001110.3(ADAM10):c.1571G>A (p.Cys524Tyr) ADAM10 Sep 01, 2013 MedGen:C0406811,OMIM:615537,Orphanet:ORPHA178307,SNOMED CT:239133004 Reticulate acropigmentation of Kitamura germline 15 58611932 AGTGTGCATTCAAGTCAAAGTCTGAGAAGTGTCGGGATGATTCAGACTGTGCAAGGGAAGG 747753388 211317 NM_022445.3(TPK1):c.185+1G>A TPK1 Sep 17, 2013 MedGen:CN517202 not provided germline 7 144682908 ATATGATATCACCGAAGGAGAGAGAGAAAGGTATGCTTTCTTTTAGTCAATGTGCATAGTA 104886080 35681 NM_000495.4(COL4A5):c.892G>A (p.Gly298Ser) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108580983 GTTGCCCTATCATTTCTTTGTATCCTATAGGGTAAACCAGGCAAAGATGGAGAAAATGGCC 121434542 32678 NM_001793.5(CDH3):c.1508G>A (p.Arg503His) CDH3 Nov 01, 2002 MedGen:C1832162,OMIM:601553,Orphanet:ORPHA1573 Juvenile macular degeneration and hypotrichosis germline 16 68685288 GGCAGGTCACAGCTGTGGGCACCCTCGACCGTGAGGATGAGCAGTTTGTGAGGAACAACAT 587779466 106903 NM_000090.3(COL3A1):c.2564G>A (p.Gly855Asp) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189003421 TTTCCTTCCATTTCATATAGGGTCCTCCTGGTCCCCAAGGTGTCAAAGGTGAACGTGGCAG 886037823 260501 NM_001711.5(BGN):c.5G>A (p.Trp2Ter) BGN May 10, 2017 MedGen:C4310811,OMIM:300989;MedGen:CN118826,Orphanet:ORPHA91387 Meester-loeys syndrome;Thoracic aortic aneurysm and aortic dissection germline;maternal X 153504636 CGCCTCTTCCCCCAGGTCCATCCGCCATGTGGCCCCTGTGGCGCCTCGTGTCTCTGCTGGC 587781337 150588 NM_001128425.1(MUTYH):c.1186+1G>A MUTYH Oct 12, 2015 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1837991,OMIM:608456,Orphanet:ORPHA247798 Hereditary cancer-predisposing syndrome;MYH-associated polyposis germline 1 45331660 AAATTCTGCTGGTGCAGAGGCCCAACTCAGGTACCTGGATACTGGGCGTGGAGGGCAGTGG -1 481818 NM_006749.4(SLC20A2):c.1604G>A (p.Trp535Ter) SLC20A2 Nov 21, 2017 MedGen:CN517202 not provided germline 8 42430169 GGGTAACGCAAGAAGCAGCTACACCCGTCTGGCTGCTGTTTTATGGAGGAGTTGGAATCTG 879255597 227107 NM_001144967.2(NEDD4L):c.2677G>A (p.Glu893Lys) NEDD4L Dec 29, 2016 MedGen:C4310669,OMIM:617201;MedGen:CN236338;MedGen:CN517202 Periventricular nodular heterotopia 7;Periventricular nodular heterotopia with syndactyly, cleft palate and developmental delay;not provided de novo;germline;unknown 18 58390667 TGTTCATAGGCTGTGCTACTCATGGACGCCGAAAAGCGTATCCGGTTACTGCAGTTTGTCA 202094100 259714 NM_001256850.1(TTN):c.44490G>A (p.Trp14830Ter) TTN Aug 24, 2016 MedGen:CN517202 not provided germline 2 178613870 TATCACTAAAGACGCAGTGACTCTCACATGGTGTGAGCCAGATGATGATGGTGGCAGCCCA 587778863 132351 NM_000321.2(RB1):c.1688G>A (p.Trp563Ter) RB1 Sep 16, 2013 Human Phenotype Ontology:HP:0009919,MeSH:D012175,MedGen:C0035335,OMIM:180200,Orphanet:ORPHA790 Retinoblastoma somatic 13 48381436 GTGAACATCGAATCATGGAATCCCTTGCATGGCTCTCAGTAAGTAGCTAAATAATTGAAGA 397514428 36432 NM_000060.4(BTD):c.1610G>A (p.Gly537Glu) BTD Dec 04, 2012 MedGen:C0220754,OMIM:253260,Orphanet:ORPHA79241,SNOMED CT:8808004 Biotinidase deficiency not provided 3 15645466 CCTCTGGGCTGGTGACGGCGGCTCTCTATGGGCGCTTGTATGAGAGGGACTAGGAAAAGTG 431905503 24994 NM_000291.3(PGK1):c.756+5G>A PGK1 Mar 28, 2006 MedGen:C1970848,OMIM:300653,Orphanet:ORPHA713 Phosphoglycerate kinase 1 deficiency germline X 78122954 TCCTTAAGGTGCTCAACAACATGGAGGTAGGAAACAAATGCCAAGTGGATGTGAAATAGCT 769370816 228176 NM_000527.4(LDLR):c.1618G>A (p.Ala540Thr) LDLR Mar 30, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline;inherited 19 11116125 TTCATGTACTGGACTGACTGGGGAACTCCCGCCAAGATCAAGAAAGGGGGCCTGAATGGTG 147718607 48236 NM_144577.3(CCDC114):c.742G>A (p.Ala248Thr) CCDC114 Aug 11, 2017 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244;MedGen:C3540844,OMIM:615067;MedGen:C0022521,OMIM:244400,Orphanet:ORPHA98861,SNOMED CT:42402006 Ciliary dyskinesia;Ciliary dyskinesia, primary, 20;Kartagener syndrome germline 19 48303953 CCCGATGTCCTGGAGAAGCGTGAAAAGCAGGGTGAGGCTGGGGCTGCTGCCTTTGCATCTC 121912302 47543 NM_001363.4(DKC1):c.121G>A (p.Glu41Lys) DKC1 May 10, 2012 MedGen:C1148551,OMIM:305000 Dyskeratosis congenita X-linked germline X 154765480 CAACACGCTGAAGAATTTCTTATCAAACCTGAATCCAAAGTTGCTAAGTTGGACACGTCTC 121909259 23352 NM_000388.3(CASR):c.889G>A (p.Glu297Lys) CASR Dec 31, 1993 MedGen:C1809471,OMIM:145980,Orphanet:ORPHA93372,SNOMED CT:190868007;MedGen:C1832615,OMIM:239200,Orphanet:ORPHA417 Hypocalciuric hypercalcemia, familial, type 1;Neonatal severe hyperparathyroidism germline 3 122261924 AATATCACGGGCAAGATCTGGCTGGCCAGCGAGGCCTGGGCCAGCTCCTCCCTGATCGCCA 128624219 26339 NM_000033.3(ABCD1):c.1202G>A (p.Arg401Gln) ABCD1 Oct 01, 1994 MedGen:C0162309,OMIM:300100,Orphanet:ORPHA43,SNOMED CT:65389002 Adrenoleukodystrophy germline X 153736232 TCCTGACAGCGGCTGCAGATGCCATTGAGCGGATCATGTCGTCGTACAAGGAGGTACCCCT 886039382 259775 NM_013334.3(GMPPB):c.260-1G>A GMPPB Aug 11, 2017 MedGen:CN517202 not provided germline 3 49723115 AGCAAGGTGGTGACCTGTCCCCTTCCCCCAGCTGGGCCCCTGGCGCTGGCCCGTGACCTAC 121918483 28350 NM_000506.3(F2):c.1027G>A (p.Glu343Lys) F2 Jan 01, 2000 MedGen:C0272317,SNOMED CT:33297000 Hereditary factor II deficiency disease germline 11 46726734 TCTGCAGACTGTGGGCTGCGACCTCTGTTCGAGAAGAAGTCGCTGGAGGACAAAACCGAAA -1 237520 NM_181486.2(TBX5):c.444G>A (p.Trp148Ter) TBX5 Apr 25, 2016 Gene:431,MedGen:C1862389,OMIM:108800 Atrial septal defect 1 maternal 12 114398639 CCCAGACTCCCCCGCCACCGGGGCGCATTGGATGAGGCAGCTCGTCTCCTTCCAGAAACTC 794728682 198036 NM_000268.3(NF2):c.810+1G>A NF2 Aug 15, 2016 MedGen:CN517202 not provided germline 22 29661340 ATCCGAAACATCTCGTACAGTGACAAGGAGGTAGGACATGTGTGTACTGCAGATGGGTCCA 281874725 36033 NM_000495.4(COL4A5):c.3925-1G>A COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108680678 TTTTGTAACATTAATGATTTTATTTATTCAGGGTAATCCTGGCCGGCCGGGTCTCAATGGA 80356509 34130 NM_001457.3(FLNB):c.1081G>A (p.Gly361Ser) FLNB Oct 09, 2008 MedGen:C1835564,OMIM:150250 Larsen syndrome, dominant type not provided 3 58097911 CAGGGAGATGCCAGTAAAGTCACTGCAAAAGGTCCAGGGTTGGAAGCTGTAGGGAACATCG 864309515 215063 NM_183357.2(ADCY5):c.1253G>A (p.Arg418Gln) ADCY5 Dec 17, 2015 MedGen:C1847627,OMIM:606703,Orphanet:ORPHA324588;MedGen:CN517202 Dyskinesia, familial, with facial myokymia;not provided germline 3 123352463 TCCAGGAGACCCGAGAGTGCATCCAGGCGCGGCTCCACTCGCAGCGGGAGAACCAGCAGCA 28933081 29923 NM_002448.3(MSX1):c.365G>A (p.Gly122Glu) MSX1 Jun 01, 2003 MedGen:C1837210,OMIM:608874 Orofacial cleft 5 germline 4 4860264 CGCGGCCGCTCGGCCATTTCTCGGTGGGGGGACTCCTCAAGCTGCCAGAAGATGCGCTCGT 72549320 31355 NM_001002294.2(FMO3):c.94G>A (p.Glu32Lys) FMO3 Aug 01, 2003 Human Phenotype Ontology:HP:0003614,MedGen:C0342739,OMIM:602079,Orphanet:ORPHA468726,SNOMED CT:237959005 Trimethylaminuria germline 1 171092752 CTGGAAGAGGGGCTGGAGCCCACCTGCTTTGAGAAGAGCAATGACATTGGGGGCCTGTGGA 104893948 406816 NM_000045.3(ARG1):c.703G>A (p.Gly235Arg) ARG1 May 31, 2017 MedGen:CN517202 not provided germline 6 131583392 AGGCCAATTCATCTAAGTTTTGATGTTGACGGACTGGACCCATCTTTCACACCAGCTACTG 63751279 426782 NM_001171.5(ABCC6):c.4441G>A (p.Gly1481Ser) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16150204 GTCATGGACAAGGGGCAGGTGGCAGAGAGCGGCAGCCCGGCCCAGCTGCTGGCCCAGAAGG 104894141 16828 NM_000102.3(CYP17A1):c.51G>A (p.Trp17Ter) CYP17A1 Jan 01, 1998 MedGen:CN042980 Complete combined 17-alpha-hydroxylase/17,20-lyase deficiency germline 10 102837311 CTTGCTGCTTACCCTAGCTTATTTGTTTTGGCCCAAGAGAAGGTGCCCTGGTGCCAAGTAC 151340620 26835 NM_001127899.3(CLCN5):c.1047G>A (p.Trp349Ter) CLCN5 Mar 01, 1997 MedGen:C1848336,OMIM:300009;MedGen:C1839874,OMIM:308990 Dent disease 1;Proteinuria, low molecular weight, with hypercalciuria and nephrocalcinosis germline X 50086360 CAGCTACTATTTTCCCCTCAAAACATTGTGGCGTTCATTCTTTGCTGCCTTGGTGGCAGCA 121909179 22708 NM_000453.2(SLC5A5):c.1628G>A (p.Gly543Glu) SLC5A5 Sep 01, 1998 MedGen:C1848805,OMIM:274400 Thyroid dyshormonogenesis 1 germline 19 17888432 CCCTGGGCACGCTGACCACTGTGCTGTGCGGAGCCCTCATCAGCTGCCTGACAGGTAGGTA 1057520680 370801 NM_139025.4(ADAMTS13):c.3044+1G>A ADAMTS13 Apr 28, 2015 MedGen:CN517202 not provided germline 9 133449966 GGCCTGCAGCCTGGAGCCCTGCCCACCTAGGTGAGTCAGCCGGTGATGGGAGGGGCAGCTC 200206736 32110 NM_172369.4(C1QC):c.100G>A (p.Gly34Arg) C1QC Apr 01, 1996 MedGen:C3150902,OMIM:613652 C1q deficiency germline 1 22644123 CTCAGGGGCCAAGCCAACACAGGCTGCTACGGGATCCCAGGGATGCCCGGCCTGCCCGGGG 1060501669 397804 NM_000051.3(ATM):c.5249G>A (p.Trp1750Ter) ATM Jun 24, 2016 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005 Ataxia-telangiectasia syndrome germline 11 108301719 TTTTAGCCACAAAGACTGGACATAGTTTCTGGGAGATTTATAAGATGACAACAGATCCAAT -1 446741 NM_000206.2(IL2RG):c.846G>A (p.Trp282Ter) IL2RG Aug 17, 2017 MedGen:CN517202 not provided germline X 71108607 GATTATCAGCCTTCTCTGTGTGTATTTCTGGCTGGAACGGTGAGATTTGGAGAAGCCCAGA 121908529 38436 NM_000030.2(AGXT):c.508G>A (p.Gly170Arg) AGXT Aug 22, 2017 MedGen:C0020501,Orphanet:ORPHA416,SNOMED CT:17901006;MedGen:C0268164,OMIM:259900,Orphanet:ORPHA93598,SNOMED CT:65520001;MedGen:CN517202 Primary hyperoxaluria;Primary hyperoxaluria, type I;not provided germline;unknown 2 240871433 ACCGGCGTGCTGCAGCCCCTTGATGGCTTCGGGGAACTCTGCCACAGGTGAGCCTGGCCCC 35004220 30493 NM_000518.4(HBB):c.93-21G>A HBB Aug 12, 2017 MedGen:C0599528;MedGen:C3841475;MedGen:C0005283,OMIM:613985,Orphanet:ORPHA848,SNOMED CT:65959000;MedGen:CN169374 Beta thalassemia major;Beta-plus-thalassemia;beta Thalassemia;not specified germline;unknown 11 5226820 TCTGATAGGCACTGACTCTCTCTGCCTATTGGTCTATTTTCCCACCCTTAGGCTGCTGGTG 28942075 18894 NM_000053.3(ATP7B):c.2293G>A (p.Asp765Asn) ATP7B Aug 01, 2016 MedGen:C0019202,OMIM:277900,Orphanet:ORPHA905,SNOMED CT:88518009 Wilson disease germline;unknown 13 51958373 AAGGCGGAGAGGAGCCCTGTGACATTCTTCGACACGCCCCCCATGCTCTTTGTGTTCATTG 1057519922 363345 NM_001313904.1(NFE2L2):c.6G>A (p.Lys2=) NFE2L2 Oct 30, 2017 Human Phenotype Ontology:HP:0030078,MeSH:C538231,MedGen:C0152013;MedGen:C2239176,OMIM:114550,Orphanet:ORPHA88673,SNOMED CT:187769009,SNOMED CT:25370001;MedGen:CN578218,OMIM:617744;Human Phenotype Ontology:HP:0030359,MedGen:C0149782;MeSH:C535575,MedGen:C1168401,OMIM:275355,Orphanet:ORPHA67037;Human Phenotype Ontology:HP:0006740,MedGen:C0279680;MeSH:D002583,MedGen:CN236667 Adenocarcinoma of lung;Hepatocellular carcinoma;IMMUNODEFICIENCY, DEVELOPMENTAL DELAY, AND HYPOHOMOCYSTEINEMIA;Squamous cell carcinoma of lung;Squamous cell carcinoma of the head and neck;Transitional cell carcinoma of the bladder;Uterine cervical neoplasms germline;somatic 2 177234082 GCCTTTTTCGCTCAGTTACAACTAGATGAAGAGACAGGTGAATTTCTCCCAATTCAGCCAG 763471771 195641 NM_002225.3(IVD):c.793+1G>A IVD Jul 23, 2014 MedGen:C0268575,OMIM:243500,Orphanet:ORPHA33,SNOMED CT:87827003 Isovaleryl-CoA dehydrogenase deficiency germline 15 40413088 AGCTAATCTTTGAAGACTGCAAGATTCCTGGTAAGTAGCACCGGGAATCGGGGAGCCCCTC 104886245 36000 NM_000495.4(COL4A5):c.3613G>A (p.Gly1205Ser) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108668327 TAATTATACTTTACTTTCATAGGCCAAAAGGGTGATGGAGGATTACCTGGGATTCCAGGAA 794726677 39918 NM_032446.2(MEGF10):c.1559G>A (p.Trp520Ter) MEGF10 Nov 20, 2011 MedGen:C3280679,OMIM:614399,Orphanet:ORPHA439212 Myopathy, areflexia, respiratory distress, and dysphagia, early-onset germline 5 127420176 TGGACGGGACCTGCACGTGTGCACCTGGATGGCGCGGGGAGAAATGCGAACTTCCCTGCCA 370540673 189172 NM_015662.2(IFT172):c.1525-1G>A IFT172 Jan 01, 2015 MedGen:C4225342,OMIM:616394 Retinitis pigmentosa 71 germline 2 27471096 TAATTGTGTTACCTGCCTTTTCTTTCTTCAGTTGCATCTGTATGATATTGAAAGCTGCTCT 121908085 19085 NM_000547.5(TPO):c.2395G>A (p.Glu799Lys) TPO Jun 14, 2016 Human Phenotype Ontology:HP:0000851,MedGen:C0010308,Orphanet:ORPHA442,SNOMED CT:190268003;MedGen:C1291299,OMIM:274500,SNOMED CT:124204003 Congenital hypothyroidism;Deficiency of iodide peroxidase germline 2 1503956 TGTGGCCTTGTGTGTCTGGCAGATGTGAACGAGTGTGCAGACGGTGCCCACCCCCCCTGCC 886039764 227576 NM_019597.4(HNRNPH2):c.617G>A (p.Arg206Gln) HNRNPH2 Oct 07, 2016 MedGen:C4310814,OMIM:300986;MedGen:CN517202 Mental retardation, X-linked, syndromic, Bain type;not provided germline X 101412605 ATCCCCCTCGAAAGCTCATGGCTATGCAGCGGCCAGGTCCCTATGATAGGCCGGGGGCTGG 794727788 195297 NM_001849.3(COL6A2):c.812G>A (p.Gly271Asp) COL6A2 Aug 05, 2014 MedGen:CN029274,OMIM:158810;MedGen:CN033863,OMIM:254090 Bethlem myopathy 1;Ullrich congenital muscular dystrophy 1 germline 21 46115882 ACTCTTTTCTCTGCTTTTAGGGTGCCAAGGGCAACATGGGTGAGCCGGGAGAGCCTGGCCA 794729271 199241 NM_001256850.1(TTN):c.47550G>A (p.Trp15850Ter) TTN Oct 31, 2013 MedGen:CN517202 not provided germline 2 178608410 TGTTACCAGCAACAGTATGCTAGTGAAATGGAATGAACCAAAAGATAATGGAAGCCCCATT 755686699 415768 NM_000444.5(PHEX):c.1809G>A (p.Trp603Ter) PHEX Apr 04, 2017 MedGen:CN517202 not provided germline X 22221653 TGATAAAAATGGAAACCTGGATCCTTGGTGGTCTACTGAATCAGAAGAAAAGTTTAAGGAA -1 439574 NM_000157.3(GBA):c.526G>A (p.Asp176Asn) GBA Apr 04, 2012 MedGen:C1961835,OMIM:230800,SNOMED CT:62201009 Gaucher's disease, type 1 germline 1 155238579 GACTTCTCCATCCGCACCTACACCTATGCAGACACCCCTGATGATTTCCAGTTGCACAACT 753896285 237609 NM_005422.2(TECTA):c.2887G>A (p.Ala963Thr) TECTA Feb 19, 2016 MedGen:C1832187,OMIM:601543 Deafness, autosomal dominant 12 germline 11 121130157 CTCTGTGACTCTGTGGCCCGGTATGCAAGCGCCTGCAAGAATGCGGACGTGGAGGTGGGGC 121908976 21967 NM_001164277.1(SLC37A4):c.287G>A (p.Trp96Ter) SLC37A4 Dec 01, 2014 MedGen:C0268146,OMIM:232220,SNOMED CT:30102006;MedGen:C0342749,OMIM:232240,SNOMED CT:237965005 Glucose-6-phosphate transport defect;Phosphate transport defect germline;unknown 11 119028288 TGGTTGGCCTGGTCAACATATTCTTTGCCTGGAGCTCCACAGTACCTGTCTTTGCTGCCCT 387907336 51096 NM_001885.2(CRYAB):c.418G>A (p.Asp140Asn) CRYAB Apr 18, 2013 MedGen:C3151065,OMIM:613763 Cataract 16, multiple types germline 11 111908874 CCTCTCACCATTACTTCATCCCTGTCATCTGATGGGGTCCTCACTGTGAATGGACCAAGGA 1057519644 362646 NM_015295.2(SMCHD1):c.410G>A (p.Gly137Glu) SMCHD1 Feb 27, 2017 MedGen:C1863878,OMIM:603457,Orphanet:ORPHA1135;Gene:2490,MedGen:C1834671,OMIM:158901 Arhinia choanal atresia microphthalmia;Facioscapulohumeral muscular dystrophy 2 germline;unknown 18 2667017 GTGGCATGTATGAATATTATGCCAGTGAAGGACAAAATCCTTTGCGTAAGTATCCCATTCA 312262709 49718 NM_025137.3(SPG11):c.267G>A (p.Trp89Ter) SPG11 Jan 31, 2013 Gene:255,MedGen:C1865864,OMIM:602099;MedGen:C1858479,OMIM:604360,Orphanet:ORPHA2822 Amyotrophic lateral sclerosis type 5;Spastic paraplegia 11, autosomal recessive germline 15 44660607 AATCTAAACTTTTTTTCTTAGCTTTCTATGGGAGGATTCTCGTAACAGCAGCACACCAACT 773496891 440076 NM_001199397.1(NEK1):c.2886-1G>A NEK1 Jun 01, 2017 MedGen:C0024507,OMIM:263520,SNOMED CT:72922008 Short rib-polydactyly syndrome, Majewski type unknown 4 169426235 TGTTTTTAATTGGTGTACCCATCTGTGGCAGGTCGGCAGATAGGATCACCATTCAGGAAAA 267606963 18262 NM_013382.5(POMT2):c.1941G>A (p.Trp647Ter) POMT2 Sep 18, 2007 MedGen:C3150416,OMIM:613156 Congenital muscular dystrophy-dystroglycanopathy with mental retardation, type B2 germline 14 77278820 TCGAGGAGGCGGCCAGGTCCTGCTCGGCTGGACACTCCATTACTTCCCGTTTTTCCTGATG 2276717 131974 NM_020949.2(SLC7A14):c.988G>A (p.Gly330Arg) SLC7A14 Mar 27, 2014 MedGen:C3810380,OMIM:615725 Retinitis pigmentosa 68 germline 3 170483441 TCCCCACTCATGGAGATGTTTGTGGCTCATGGGTTCTATGCTGCCAAATTCGTAGTGGCCA 797045495 208264 NM_004380.2(CREBBP):c.5027G>A (p.Trp1676Ter) CREBBP Dec 23, 2014 MedGen:C0035934,OMIM:180849,Orphanet:ORPHA353277,SNOMED CT:45582004 Rubinstein-Taybi syndrome germline 16 3731337 CCTTCCTCACCCTCGCCAGAGACAAGCACTGGGAGTTCTCCTCCTTGCGCCGCTCCAAGTG 398122853 38917 NM_004006.2(DMD):c.9G>A (p.Trp3Ter) DMD Oct 13, 2017 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009;MedGen:C3668940,OMIM:302045;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001;MedGen:CN517202 Becker muscular dystrophy;Dilated cardiomyopathy 3B;Duchenne muscular dystrophy;not provided germline X 33211304 GCCTTGATATACACTTTTCAAAATGCTTTGGTGGGAAGAAGTAGAGGACTGTTGTAAGTAC 1060502301 396973 NM_000264.4(PTCH1):c.3152G>A (p.Trp1051Ter) PTCH1 Jul 15, 2016 MedGen:C0004779,OMIM:109400,Orphanet:ORPHA377,SNOMED CT:69408002;MedGen:C0027672,SNOMED CT:699346009 Gorlin syndrome;Hereditary cancer-predisposing syndrome germline 9 95458029 TCGTGTGCGCTGTCTTCCTTCTGAACCCCTGGACGGCCGGGATCATTGTGAGTGTATTATA 387907086 40003 NM_153334.6(SCARF2):c.773G>A (p.Cys258Tyr) SCARF2 Dec 01, 2010 MedGen:C1833136,OMIM:600920,Orphanet:ORPHA2460 Marden Walker like syndrome germline 22 20431099 GCGGCCGCTGCCACCCTGTGGACGGCACGTGTGCCTGCGAGCCGGGCTACCGCGGCAAGTA 57661783 77390 NM_002055.4(GFAP):c.628G>A (p.Glu210Lys) GFAP Jan 08, 2015 MedGen:C0270726,OMIM:203450,Orphanet:ORPHA58,SNOMED CT:81854007;MedGen:CN517202 Alexander's disease;not provided germline 17 44913421 CGCTTCTCTCACCCTGGTCAGGAGGTTCGGGAACTCCAGGAGCAGCTGGCCCGACAGCAGG 397515859 51608 NM_000138.4(FBN1):c.7955G>A (p.Cys2652Tyr) FBN1 May 02, 2013 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:CN517202 Marfan syndrome;not provided germline 15 48415632 TCAGTGGAGGATGCCAAGACATCAATGAATGTGGCTCTGCGCAGGCCCCCTGCAGCTATGG 80358250 23199 NM_138638.4(CFL2):c.103G>A (p.Ala35Thr) CFL2 Mar 15, 2012 MedGen:C1853154,OMIM:610687 Nemaline myopathy 7 germline 14 34713462 ACACAAGAGGAGATCAAAAAGAGAAAGAAAGCAGTTCTCTTCTGTTTAAGCGATGACAAAA 1085307176 414106 NM_001204.6(BMPR2):c.197G>A (p.Cys66Tyr) BMPR2 - MedGen:C0152171,OMIM:178600,SNOMED CT:26174007 Primary pulmonary hypertension germline 2 202464929 GGACAATATTATGCTCGAAAGGTAGCACCTGCTATGGCCTTTGGGAGAAATCAAAAGGGGA -1 445847 NM_018488.3(TBX4):c.281+1G>A TBX4 Oct 02, 2017 MedGen:CN517202 not provided germline 17 61457632 CACCGAGATGATCATCACTAAGGCTGGCAGGTCAGCGCTGGGAGATTTACTTCCGGGGATG 869025600 224858 NM_001142864.3(PIEZO1):c.1669+1G>A PIEZO1 Aug 04, 2016 MedGen:C4225184,OMIM:616843 Lymphedema, hereditary, III germline 16 88735134 CGCTGACGGAGGTCACCGTGGCAGACACAGGTGAGTGGTGGGCCAGAGGCGGGGGTTGCCC 137852821 29075 NM_000439.4(PCSK1):c.1447G>A (p.Gly483Arg) PCSK1 Jul 01, 1997 MedGen:C1833053,OMIM:600955,Orphanet:ORPHA71528 Proprotein convertase 1/3 deficiency germline 5 96399020 TTTAATGTATTTAGAGCCCTGAAAGCTAATGGAGAAGTTATCATTGAAATTCCAACAAGAG 1057518849 360912 NM_024757.4(EHMT1):c.2712+1G>A EHMT1 Sep 27, 2017 Human Phenotype Ontology:HP:0001999,MedGen:C0424503;Human Phenotype Ontology:HP:0002355,MedGen:C0311394;Human Phenotype Ontology:HP:0001263,MedGen:C4020875;Human Phenotype Ontology:HP:0002126,MedGen:C0266464,Orphanet:ORPHA35981;MedGen:CN517202 Abnormal facial shape;Difficulty walking;Global developmental delay;Polymicrogyria;not provided germline;unknown 9 137800985 AAGGGCTCTGACATCAACATCCGAGACAACGTAAGTTCGTCACACCCTCCCCGGGAGCCGT 45517182 58808 NM_000548.4(TSC2):c.1599+1G>A TSC2 Nov 02, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1860707,OMIM:613254;MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000 Hereditary cancer-predisposing syndrome;Tuberous sclerosis 2;Tuberous sclerosis syndrome germline 16 2064428 TTCAACAGCCTGCTGGACATCATCGAGAAGGTGAGAGCCGTTGTACCCGGGGCCGGGTGCT 794728021 197402 NM_001613.2(ACTA2):c.116G>A (p.Arg39His) ACTA2 Jul 24, 2017 MedGen:C2673186,OMIM:611788;MedGen:CN517202 Aortic aneurysm, familial thoracic 6;not provided germline 10 88948815 CCAGGGCTGTTTTCCCATCCATTGTGGGACGTCCCAGACATCAGGTGAGGAAAATTATGAT 587779818 132798 NM_000051.3(ATM):c.170G>A (p.Trp57Ter) ATM Aug 04, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Ataxia-telangiectasia syndrome;Hereditary cancer-predisposing syndrome;not provided germline;unknown 11 108227873 CAGATTCCAAACAAGGAAAATATTTGAATTGGGATGCTGTTTTTAGGTATTCTATTCAAAT 119103241 17139 NM_001040716.1(PC):c.467G>A (p.Arg156Gln) PC May 01, 2009 MedGen:C0034341,OMIM:266150,SNOMED CT:87694001 Pyruvate carboxylase deficiency germline 11 66871335 TCCGCAAGATGGGAGACAAGGTGGAGGCCCGGGCCATCGCCATTGCTGCGGGTGAATATAA 281874669 35585 NM_000495.4(COL4A5):c.142G>A (p.Gly48Arg) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108559064 ACCTTACCTTTCATTCTCATTTAATTGCAGGGAGAGAGAGGGTTTCCAGGTTTGGAAGGAC 80356613 23720 NM_000525.3(KCNJ11):c.157G>A (p.Gly53Ser) KCNJ11 Jul 05, 2011 MedGen:C1864623,OMIM:610582 Transient neonatal diabetes mellitus 3 germline 11 17387935 AACGTGGCCCACAAGAACATCCGGGAGCAGGGCCGCTTCCTGCAGGACGTGTTCACCACGC 121912773 32696 NM_000494.3(COL17A1):c.1898G>A (p.Gly633Asp) COL17A1 Aug 01, 2000 MedGen:C0268374,OMIM:226650,Orphanet:ORPHA89840,SNOMED CT:33662006 Adult junctional epidermolysis bullosa germline 10 104053072 GAGGGCGAGAAGGCCCCATGGGACCTCGTGGTGAGGCAGGGCCTCCTGGATCTGGAGAGAA 730882082 181226 NM_000527.4(LDLR):c.409G>A (p.Gly137Ser) LDLR Nov 05, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000;MedGen:CN517202 Familial hypercholesterolemia;not provided germline;not applicable;unknown 19 11105315 GTCTGTGACTCAGACCGGGACTGCTTGGACGGCTCAGACGAGGCCTCCTGCCCGGTGCTCA 587777074 97543 NM_001289123.1(TUBB4A):c.964G>A (p.Ala322Thr) TUBB4A Apr 01, 2013 MedGen:C1851943,OMIM:128101,Orphanet:ORPHA98805 Autosomal dominant torsion dystonia 4 germline 19 6495688 CCTCGCCTGCACTTCTTCATGCCCGGCTTCGCACCCCTGACCAGCCGGGGCAGCCAGCAGT 80356935 68777 NM_007294.3(BRCA1):c.1059G>A (p.Trp353Ter) BRCA1 Apr 13, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C0677776,Orphanet:ORPHA145;MedGen:CN517202 Breast-ovarian cancer, familial 1;Familial cancer of breast;Hereditary breast and ovarian cancer syndrome;not provided germline 17 43094472 TGCTGATCCCCTGTGTGAGAGAAAAGAATGGAATAAGCAGAAACTGCCATGCTCAGAGAAT 587779473 107234 NM_000090.3(COL3A1):c.3482G>A (p.Gly1161Glu) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189008099 ATGGAACCAGTGGACATCCAGGTCCCATTGGACCACCAGGGCCTCGAGGTAACAGAGGTGA 886037764 217206 NM_147127.4(EVC2):c.3141G>A (p.Trp1047Ter) EVC2 - MedGen:C0013903,OMIM:225500,Orphanet:ORPHA289,SNOMED CT:62501005 Chondroectodermal dysplasia de novo 4 5576371 AGCCCAGCAGCAGCAGGCCCTGGCGAGCTGGCAGCAGTGGGTGGCCGATGGGCCCGGGATT 137853120 16443 NM_153609.3(TMPRSS6):c.1561G>A (p.Asp521Asn) TMPRSS6 May 28, 2009 Human Phenotype Ontology:HP:0001935,MedGen:C0085576,OMIM:206200,Orphanet:ORPHA209981,SNOMED CT:234349007 Microcytic anemia germline 22 37073553 GATGGGCAGCCTGATTGTCTCAACGGCAGCGACGAAGAGCAGTGCCAGGAAGGTAGGGCAG 587777439 139393 NM_000890.4(KCNJ5):c.736G>A (p.Glu246Lys) KCNJ5 Apr 01, 2014 MedGen:C3150933,OMIM:613677,Orphanet:ORPHA251274 Familial hyperaldosteronism type 3 germline 11 128912009 GCCAAGCTCATCAAGTCCCGGCAGACCAAAGAGGGGGAGTTCATCCCCCTGAACCAGACAG 863224980 213881 NM_004006.2(DMD):c.1331+1G>A DMD Nov 07, 2013 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Duchenne muscular dystrophy germline X 32644131 CAGGGTAGCTAGCATGGAAAAACAAAGCAAGTAAGTCCTTATTTGTTTTTAATTAAGAAGA 121917830 263757 NM_000121.3(EPOR):c.1316G>A (p.Trp439Ter) EPOR Jun 28, 2016 MedGen:C1851490,OMIM:133100 Familial erythrocytosis, 1 germline 19 11378195 TGGACCCCAGCTCCCAGCTCTTGCGTCCATGGACACTGTGCCCTGAGCTGCCCCCTACCCC 774396430 441048 NM_000083.2(CLCN1):c.979G>A (p.Val327Ile) CLCN1 Dec 20, 2015 MedGen:CN517202 not provided germline 7 143330897 CGAGTGCTGGCAGTGTGGAACAAGGATGCTGGTAACCAAGGAGGCCTTGGGTGGAGGCCAT 374793617 55278 NM_024022.2(TMPRSS3):c.323-6G>A TMPRSS3 Oct 17, 2013 MedGen:CN043648,Orphanet:ORPHA87884 Nonsyndromic hearing loss and deafness germline 21 42388532 GCCACTAATAAGCCTTTCTTTCTGCACATCGGCCAGTCCGGGTGGGTGGTCAGAATGCCGT 869320711 227151 NM_001163436.2(TBCK):c.1532G>A (p.Arg511His) TBCK May 19, 2016 MedGen:C4225161,OMIM:616900 Hypotonia, infantile, with psychomotor retardation and characteristic facies 3 germline 4 106233045 TATTTTAACAGATTGAAGTGGATATTCCTCGCTGTCATCAGTACGATGAACTGTTATCATC 122445104 26775 NM_000489.4(ATRX):c.5225G>A (p.Arg1742Lys) ATRX Aug 01, 1999 MedGen:C1845055,OMIM:301040,Orphanet:ORPHA847 ATR-X syndrome germline X 77620442 CTAAAGCTATGAATTCTATACGATCAAGGAGGAGGATTATTTTAACAGGAACACCACTTCA 121918351 22659 NM_000214.2(JAG1):c.551G>A (p.Arg184His) JAG1 Mar 29, 2016 MedGen:C1956125,OMIM:118450 Alagille syndrome 1 germline 20 10658611 CGGGCGTTGCCCACTTTGAGTATCAGATCCGCGTGACCTGTGATGACTACTACTATGGCTT 1800747 70044 NM_007294.3(BRCA1):c.5075-1G>A BRCA1 Nov 01, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;Human Phenotype Ontology:HP:0100013,MeSH:D001943,MedGen:C1458155,Orphanet:ORPHA180250,SNOMED CT:126926005;MedGen:CN517202 Breast-ovarian cancer, familial 1;Familial cancer of breast;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;Neoplasm of the breast;not provided germline;unknown 17 43063952 TCTAATCCTTTGAGTGTTTTTCATTCTGCAGATGCTGAGTTTGTGTGTGAACGGACACTGA 377651057 36391 NM_000060.4(BTD):c.935G>A (p.Gly312Asp) BTD Dec 04, 2012 MedGen:C0220754,OMIM:253260,Orphanet:ORPHA79241,SNOMED CT:8808004 Biotinidase deficiency not provided 3 15644791 ACCACCCAGTTCTGGGGATGACAGGAAGTGGCATACACACCCCTCTGGAGTCCTTTTGGTA 864621970 204425 NM_001015051.3(RUNX2):c.476G>A (p.Gly159Asp) RUNX2 Apr 01, 2015 MedGen:C0008928,OMIM:119600,Orphanet:ORPHA1452,SNOMED CT:65976001 Cleidocranial dysostosis de novo 6 45431915 CAGATGGGACTGTGGTTACTGTCATGGCGGGTAACGATGAAAATTATTCTGCTGAGCTCCG 1131691085 420771 NM_001042492.2(NF1):c.1278G>A (p.Trp426Ter) NF1 May 13, 2015 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 17 31206257 TGTTTTTCTCTAGTCCGCATTGGATTGGTGGCCTAAGATTGATGCTGTGTATTGTCACTCG 769677823 244092 NM_003922.3(HERC1):c.13559G>A (p.Gly4520Glu) HERC1 Aug 04, 2016 MedGen:C4310766,OMIM:617011,Orphanet:ORPHA457359 Macrocephaly, dysmorphic facies, and psychomotor retardation germline 15 63623777 GAGCGTGGAAGGTTAAGCTGGTTGGAGAAGGGGCTGATGATGCTGGAGGAGTGTTTGATGA 1057518162 359378 NM_002977.3(SCN9A):c.2108G>A (p.Trp703Ter) SCN9A Oct 21, 2016 MedGen:CN517202 not provided germline 2 166280559 AAGAGTCCAGACAAAAATGTCCACCTTGGTGGTACAGATTTGCACACAAATTCTTGATCTG 1064794060 405452 NM_001256850.1(TTN):c.71355G>A (p.Trp23785Ter) TTN Aug 24, 2015 MedGen:CN517202 not provided germline 2 178569854 CATAACCAGATCTTCAGTATTCCTTTCTTGGAGCAAACCAATATATGATGGTGGCTGTGAA 1057516088 354020 NM_172107.3(KCNQ2):c.643G>A (p.Gly215Arg) KCNQ2 Mar 31, 2016 MedGen:C3150986,OMIM:613720,Orphanet:ORPHA439218 Early infantile epileptic encephalopathy 7 germline 20 63444706 ATTCTGCGGATGATCCGCATGGACCGGCGGGGAGGCACCTGGAAGCTGCTGGGCTCTGTGG 200398202 39314 NM_002977.3(SCN9A):c.1867G>A (p.Asp623Asn) SCN9A Jan 01, 2012 MedGen:C3276709 Small fiber neuropathy germline 2 166284560 CCGGTGAACGGGAAAATGCACAGTGCTGTGGACTGCAACGGTGTGGTCTCCCTGGTTGATG 61754455 153262 NM_004992.3(MECP2):c.311G>A (p.Trp104Ter) MECP2 Feb 03, 2006 MedGen:C0035372,OMIM:312750,Orphanet:ORPHA778,SNOMED CT:68618008 Rett syndrome unknown X 154032273 TGTATGATGACCCCACCCTGCCTGAAGGCTGGACACGGAAGCTTAAGCAAAGGAAATCTGG 121917752 27918 NM_001040142.1(SCN2A):c.668G>A (p.Arg223Gln) SCN2A Apr 01, 2004 MedGen:C1843140,OMIM:607745,Orphanet:ORPHA140927 Benign familial neonatal-infantile seizures germline 2 165309414 TCTCAGCGTTGAGAACATTCAGAGTTCTCCGAGCATTGAAAACAATTTCAGTCATTCCAGG 140385286 482070 NM_025137.3(SPG11):c.1085G>A (p.Trp362Ter) SPG11 Oct 31, 2017 MedGen:CN517202 not provided germline 15 44651862 CCAAACTGGAGGTTTCCTGTTGTGCTCCATGGTTCCAGGATATTTTGCATTTGGAGTCACC 121965050 15206 NM_000274.3(OAT):c.550G>A (p.Ala184Thr) OAT Jun 01, 1992 Human Phenotype Ontology:HP:0012026,MedGen:C0599035,OMIM:258870,SNOMED CT:276426004 Ornithine aminotransferase deficiency germline 10 124405534 GCTGGGAACTTCTGGGGTAGGACGTTGTCTGCTATCTCCAGTTCCACAGACCCAACCAGTT 121908991 21891 NM_016203.3(PRKAG2):c.1592G>A (p.Arg531Gln) PRKAG2 Jun 20, 2017 MedGen:C1849813,OMIM:261740,Orphanet:ORPHA439854;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Glycogen storage disease of heart, lethal congenital;Primary familial hypertrophic cardiomyopathy;not provided germline 7 151560610 GTGTCCTGCTTTTCTCTTTGCAGGTCCATCGGCTGGTGGTGGTAAATGAAGCAGATAGTAT -1 448520 NM_000642.2(AGL):c.4347+1G>A AGL Jul 07, 2017 MedGen:C0017922,OMIM:232400,Orphanet:ORPHA308684,SNOMED CT:66937008 Glycogen storage disease type III germline 1 99916498 GCTAAAGGTTTCAATTATCACCAAGGACCTGTAAGAATTTCATTTATCTTCTGAGTTTCAG 80356533 27950 NM_152296.4(ATP1A3):c.829G>A (p.Glu277Lys) ATP1A3 Jul 15, 2016 MedGen:C1868681,OMIM:128235,Orphanet:ORPHA71517 Dystonia 12 de novo;germline 19 41985082 CTGGAGGTGGGCAAGACGCCCATCGCCATCGAGATTGAGCACTTCATCCAGCTCATCACCG 80358809 66611 NM_000059.3(BRCA2):c.581G>A (p.Trp194Ter) BRCA2 Nov 08, 2016 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome germline 13 32326563 TAGGAGCTGAGGTGGATCCTGATATGTCTTGGTCAAGTTCTTTAGCTACACCACCCACCCT 730882139 181182 NM_001039550.1(DNAJB2):c.229+1G>A DNAJB2 Apr 30, 2015 MedGen:C0007959,Orphanet:ORPHA166,SNOMED CT:50548001;MedGen:C3553989,OMIM:614881,Orphanet:ORPHA314485 Charcot-Marie-Tooth disease;Spinal muscular atrophy, distal, autosomal recessive, 5 germline 2 219281772 GCTATGGCCGGGAAGGGCTGACAGGGACAGGTAGGTGGAGTGGTGAGGCCCAGGAATGGAG 771317809 371156 NM_000790.3(DDC):c.1073G>A (p.Arg358His) DDC Oct 17, 2016 MedGen:C1291564,OMIM:608643,Orphanet:ORPHA35708,SNOMED CT:124600004;MedGen:CN517202 Deficiency of aromatic-L-amino-acid decarboxylase;not provided germline;maternal 7 50470140 ATTGGCAGATACCACTGGGCAGAAGATTTCGCTCTTTGAAAATGTGGTTTGTATTTAGGAT 730881116 178913 NM_001001430.2(TNNT2):c.861G>A (p.Trp287Ter) TNNT2 Jan 09, 2017 MedGen:CN230736;MedGen:CN517202 Cardiovascular phenotype;not provided germline 1 201359216 CCGCGGGAAGGCTAAAGTCACCGGGCGCTGGAAATAGAGCCTGGCCTCCTTCACCAAAGAT 121912459 29822 NM_000454.4(SOD1):c.289G>A (p.Asp97Asn) SOD1 Feb 01, 2001 MedGen:CN070063 Amyotrophic lateral sclerosis 1, autosomal recessive germline 21 31667307 AATGTGACTGCTGACAAAGATGGTGTGGCCGATGTGTCTATTGAAGATTCTGTGATCTCAC 886037753 209379 NM_002230.2(JUP):c.468G>A (p.Pro156=) JUP Jun 01, 2010 MedGen:C1832600,OMIM:601214,Orphanet:ORPHA34217 Naxos disease germline 17 41769418 GCTCACCAAACTGCTCAACGACGAGGACCCGGTCTGTGAGGGTCCCTGCTAGGGTGGGGGC 755959303 247652 NM_144997.6(FLCN):c.1432+1G>A FLCN Apr 07, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0346010,OMIM:135150,Orphanet:ORPHA122,SNOMED CT:110985001;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Multiple fibrofolliculomas;not provided germline 17 17215184 CCAGTGGGAGCCCTGTAGCTGCAGACCGAGGTGGGTGCCCCCAGGCAGAGTGTCCTTTTTG 587779642 107120 NM_000090.3(COL3A1):c.2501G>A (p.Gly834Asp) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189003010 AAGGAGAAAGAGGGGCTCCGGGTGAGAAAGGTGAAGGAGGCCCTCCTGGAGTTGCAGGACC 398124574 102473 NM_000056.4(BCKDHB):c.344-1G>A BCKDHB Aug 23, 2013 MedGen:C0024776,OMIM:248600,SNOMED CT:27718001 Maple syrup urine disease germline 6 80167677 ACATTAACCTTTTTTTCTTTTCTATTTTAAGGAAAAGATAGAGTTTTTAATACCCCATTGT 137854439 15813 NM_198488.3(FAM83H):c.1380G>A (p.Trp460Ter) FAM83H Aug 01, 2008 MedGen:C0399376,OMIM:130900,Orphanet:ORPHA100032,SNOMED CT:109471001 Amelogenesis imperfecta, hypocalcification type germline 8 143728081 TGACCAGCTCTACCAGCAGCAGTACCAGTGGGACCCGCAGCTCACGCCGGCGCGCCCGCAA 147936696 199792 NM_001609.3(ACADSB):c.303+1G>A ACADSB Jul 30, 2015 MedGen:C1864912,OMIM:610006,Orphanet:ORPHA79157,SNOMED CT:444838008;MedGen:CN517202 Deficiency of 2-methylbutyryl-CoA dehydrogenase;not provided germline 10 123037848 TCAGTAATACAAGGATTATTTCAACAAGGGGTACATTTCATAATTCTTCCACTTTCAAGCT 767182886 481696 NM_000094.3(COL7A1):c.5532+1G>A COL7A1 Nov 29, 2017 MedGen:CN517202 not provided germline 3 48578320 GATGGCAAACCTGGCCTGAATGGAAAAAACGTGAGTGTGTCCAGGGCAGCTGCGGCGAAAC 121909152 22821 NM_000288.3(PEX7):c.649G>A (p.Gly217Arg) PEX7 Mar 04, 2016 MedGen:CN159238,OMIM:614879;MedGen:C1859133,OMIM:215100,Orphanet:ORPHA309789 Peroxisome biogenesis disorder 9B;Rhizomelic chondrodysplasia punctata type 1 germline;unknown 6 136869905 CTGAATTGTTTTTAGAATTTGCTGGTGACCGGGGCGGTTGACTGTAGTTTGAGAGGCTGGG 1135401764 424701 NM_001197104.1(KMT2A):c.3334+1G>A KMT2A Aug 01, 2017 MedGen:C1854630,OMIM:605130,Orphanet:ORPHA319182 Wiedemann-Steiner syndrome de novo 11 118476983 AAAAGATTTTGTCTTCCATGGGGAATGATGGTAGGTCAAGAAGGTCAATCTTGGAGTCGGA 397515612 76829 m.3376G>A MT-ND1 Sep 19, 2013 Human Phenotype Ontology:HP:0001112,MedGen:C0917796,OMIM:535000,Orphanet:ORPHA104,SNOMED CT:58610003 Leber's optic atrophy not provided MT 3376 CTAATCGCAATGGCATTCCTAATGCTTACCGAACGAAAAATTCTAGGCTATATACAACTAC 66527965 32365 NM_000088.3(COL1A1):c.1777G>A (p.Gly593Ser) COL1A1 Jan 01, 1993 MedGen:C0268360,OMIM:166210,SNOMED CT:86470003 Osteogenesis imperfecta, recessive perinatal lethal germline 17 50193038 CCTAACTCCCTTTCTCCACAGGGAGAGCCCGGCAAGGCTGGAGAGCGAGGTGTTCCCGGAC 143570936 177421 NM_000023.3(SGCA):c.739G>A (p.Val247Met) SGCA Jun 12, 2017 MedGen:C2936332,OMIM:608099,Orphanet:ORPHA62 Limb-girdle muscular dystrophy, type 2D germline;unknown 17 50169246 GCACCCCACTTCCGCGTTGACTGGTGCAATGTGACCCTGGTGAGGAGGGACCCTGGGTCCG 80358294 20525 NM_012193.3(FZD4):c.1250G>A (p.Arg417Gln) FZD4 Aug 01, 2005 MedGen:C1851402,OMIM:133780;MedGen:C1858262 Exudative vitreoretinopathy 1;Exudative vitreoretinopathy, digenic germline 11 86951506 CTGCAGGTTTGGTGGCCTTGTTCAAAATTCGGTCAAATCTTCAAAAGGATGGGACAAAGAC 1064796928 432165 NM_000444.5(PHEX):c.1586+1G>A PHEX Nov 06, 2013 MedGen:C0733682,OMIM:307800,Orphanet:ORPHA89936,SNOMED CT:82236004 Familial X-linked hypophosphatemic vitamin D refractory rickets germline X 22178377 CTGGCTAAGAAAAGCCGTTCCAAAAACAGAGTGAGTATTAAACAAAAAAAGTTAAATAGAT 81002797 66376 NM_000059.3(BRCA2):c.475+1G>A BRCA2 Apr 03, 2016 MedGen:C2675520,OMIM:612555 Breast-ovarian cancer, familial 2 germline 13 32326151 CACATGTAACACCACAAAGAGATAAGTCAGGTATGATTAAAAACAATGCTTTTTATTCTTA 999921351 417101 NM_019098.4(CNGB3):c.1460G>A (p.Trp487Ter) CNGB3 Mar 27, 2017 MedGen:C1849792,OMIM:262300 Achromatopsia 3 germline 8 86628939 AGCGAGTTCGGACTTGGTATGAATATACATGGGACTCTCAAAGAATGCTAGGTAAGCATGG 80358544 46368 NM_000059.3(BRCA2):c.2979G>A (p.Trp993Ter) BRCA2 Feb 03, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome germline 13 32337334 AGAAAAAAATAATGATTACATGAACAAATGGGCAGGACTCTTAGGTCCAATTTCAAATCAC 80358162 131276 NM_007294.3(BRCA1):c.4986+1G>A BRCA1 Oct 02, 2015 MedGen:C2676676,OMIM:604370 Breast-ovarian cancer, familial 1 germline 17 43070927 GTGGTGTCTGGCCTGACCCCAGAAGAATTTGTGAGTGTATCCATATGTATCTCCCTAATGA 72558414 103164 NM_000531.5(OTC):c.620G>A (p.Ser207Asn) OTC - MedGen:CN517202 not provided unknown X 38403697 GGAACAATATCCTGCACTCCATCATGATGAGCGCAGCGAAATTCGGAATGCACCTTCAGGC 587777384 136550 NM_001615.3(ACTG2):c.533G>A (p.Arg178His) ACTG2 May 02, 2015 MeSH:D030342,MedGen:C0950123;MedGen:C1835084,OMIM:155310,Orphanet:ORPHA2241 Inborn genetic diseases;Visceral myopathy de novo;germline;maternal 2 73913566 AAGGCTATGCCCTGCCCCATGCCATCATGCGCCTGGACTTGGCTGGCCGTGACCTCACGGA 863223776 210204 NM_000192.3(TBX5):c.755G>A (p.Ser252Asn) TBX5 May 05, 2015 MedGen:CN517202 not provided germline 12 114385476 TGGAGCTGCACAGAATGTCAAGAATGCAAAGGTAGGAAAGTGGATTCCTCAACTTTCTCCT 121918009 28711 NM_000478.5(ALPL):c.1001G>A (p.Gly334Asp) ALPL Nov 04, 2016 MedGen:C0020630,Orphanet:ORPHA436;Human Phenotype Ontology:HP:0003239,MedGen:C0268412,OMIM:241500,Orphanet:ORPHA247651,SNOMED CT:55236002;MedGen:CN517202 Hypophosphatasia;Infantile hypophosphatasia;not provided germline;unknown 1 21575736 CCGAGGCCTTTGCCTTGGTGTCCCAAGGAGGCAGAATTGACCACGGGCACCATGAAGGAAA 5030817 52772 NM_000551.3(VHL):c.464-1G>A VHL May 26, 2015 MedGen:C0019562,OMIM:193300,Orphanet:ORPHA892,SNOMED CT:46659004 Von Hippel-Lindau syndrome germline 3 10149786 GCCACTGAGGATTTGGTTTTTGCCCTTCCAGTGTATACTCTGAAAGAGCGATGCCTCCAGG 28939080 20231 NM_054027.4(ANKH):c.1165G>A (p.Gly389Arg) ANKH Jun 01, 2009 MedGen:C0856830,OMIM:118600;MedGen:C1852502,OMIM:123000 Chondrocalcinosis 2;Craniometaphyseal dysplasia, autosomal dominant germline 5 14713644 CCAACAGTCACAGTGAGGGCGCATCTCACCGGGTGGCTGATGACACTGAAGAAAACCTTCG 121908664 21313 NM_002335.3(LRP5):c.1481G>A (p.Arg494Gln) LRP5 Sep 16, 2016 MedGen:C0432252,OMIM:259770,Orphanet:ORPHA2788,SNOMED CT:254112001;MedGen:CN517202 Osteoporosis with pseudoglioma;not provided germline 11 68389949 TCGAGTGTGCCAACTTGGATGGGCAGGAGCGGCGTGTGCTGGTCAATGCCTCCCTCGGGTG 121909092 22321 NM_001005360.2(DNM2):c.1102G>A (p.Glu368Lys) DNM2 Jun 13, 2017 MedGen:C1847902,OMIM:606482;MedGen:CN221282;MedGen:C1834558,OMIM:160150,Orphanet:ORPHA169189 DNM2-related intermediate Charcot-Marie-Tooth neuropathy;Myopathy, centronuclear;Myopathy, centronuclear, 1 germline 19 10793829 GGGGGCGCCCGAATCAATCGCATCTTCCACGAGCGGTTCCCATTTGAGCTGGTGAAGGTAG 779592523 211790 NM_017775.3(TTC19):c.194G>A (p.Trp65Ter) TTC19 Sep 18, 2012 MedGen:CN517202 not provided germline 17 16000127 CCTCAGAGCCCCTTCCCGCAGCGCTCGCCTGGTTCTCGAGGCCCGCTGCGGCAGAGGAGGA 121912455 29818 NM_000454.4(SOD1):c.217G>A (p.Gly73Ser) SOD1 Dec 09, 1997 MedGen:C1862939,OMIM:105400 Amyotrophic lateral sclerosis type 1 germline 21 31666496 CCTCACTTTAATCCTCTATCCAGAAAACACGGTGGGCCAAAGGATGAAGAGAGGTAACAAG 121908377 20106 NM_014491.3(FOXP2):c.1658G>A (p.Arg553His) FOXP2 Mar 02, 2016 MedGen:C0750927,OMIM:602081,Orphanet:ORPHA209908 Speech-language disorder 1 germline 7 114662075 TTCTCTTCTGTCTGCTTTAGAATGCAGTACGTCATAATCTTAGCCTGCACAAGTGTTTTGT 587779617 107083 NM_000090.3(COL3A1):c.2824-1G>A (p.Gly942Glufs*294) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189004256 AGATGAGCTAAGTCTTCATTATCTGTATTAGGGAGCTCCAGGCCCACTTGGGATTGCTGGG 119476044 19395 NM_022051.2(EGLN1):c.1112G>A (p.Arg371His) EGLN1 Sep 15, 2007 MedGen:C1853286,OMIM:609820 Erythrocytosis, familial, 3 germline 1 231370598 ATAGACTGCTGTTTTTCTGGTCTGACCGTCGCAACCCTCATGAAGTACAACCAGCATATGC 121908450 20888 NM_022336.3(EDAR):c.266G>A (p.Arg89His) EDAR Nov 20, 2012 MedGen:C0406702,OMIM:224900,Orphanet:ORPHA248,SNOMED CT:27025001;MedGen:C3551587 Autosomal recessive hypohidrotic ectodermal dysplasia syndrome;Ectodermal dysplasia 10a, hypohidrotic/hair/tooth type, autosomal dominant germline 2 108929288 TTTCCAAAGGAGGCTACCAGATATGCAGGCGTCACAAAGACTGTGAGGGCTTCTTCCGGGC 121909234 22877 NM_000314.6(PTEN):c.649G>A (p.Val217Ile) PTEN Sep 01, 2000 Human Phenotype Ontology:HP:0002861,MeSH:D008545,MedGen:C0025202,SNOMED CT:2092003 Malignant melanoma somatic 10 87957867 GTATTTAACCATGCAGATCCTCAGTTTGTGGTCTGCCAGCTAAAGGTGAAGATATATTCCT -1 433572 NM_144997.6(FLCN):c.507G>A (p.Trp169Ter) FLCN Feb 14, 2017 MedGen:CN169374 not specified germline 17 17224033 GGACAGCCTGGCCAGGGGCTTCCAGCGCTGGTACAGCATCATCACCATCATGATGGACCGG 886039414 259999 NM_130799.2(MEN1):c.660G>A (p.Trp220Ter) MEN1 May 06, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline 11 64807675 CATAATGATCTCATCCCCCCCTAAGAGCTGGCTGTACCTGAAAGGATCATACATGCGCTGT 879254606 245677 NM_000527.4(LDLR):c.642G>A (p.Trp214Ter) LDLR Mar 25, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11105548 CCTAAGTGGCGAGTGCATCCACTCCAGCTGGCGCTGTGATGGTGGCCCCGACTGCAAGGAC 200402328 172245 NM_002206.2(ITGA7):c.2357+1G>A ITGA7 Mar 15, 2017 MedGen:CN517202 not provided germline 12 55694442 GGAACTGGAGGTAGAGCTGCTGTTGGCCACGTAAGCCAGGCGGGGCCGGAAGGGTGAGGTG -1 440086 NM_025132.3(WDR19):c.475G>A (p.Asp159Asn) WDR19 Jun 01, 2017 MedGen:C0432198,OMIM:269860,SNOMED CT:254052001 Type IV short rib polydactyly syndrome paternal 4 39199546 GCAGAAAATCTGCTTGCTTTAGGTGGTGAAGATAAAATGATTACAGTTAGTAATCAGGAAG 587776908 40340 NM_017755.5(NSUN2):c.2035G>A (p.Gly679Arg) NSUN2 May 04, 2012 MedGen:C1970199,OMIM:611091 Mental retardation, autosomal recessive 5 unknown 5 6600195 GACGCTCTGCAGTGTCCCATCGTCTTATGCGGATGGCGGGGAAAGGCCTCCATTCGAACTT 121918722 27527 NM_000359.2(TGM1):c.1147G>A (p.Val383Met) TGM1 Jul 01, 1997 MedGen:C3536797,OMIM:242300 Autosomal recessive congenital ichthyosis 1 germline 14 24259087 CCCTATGGCCAGTGCTGGGTCTTTGCTGGCGTGACCACCACAGGTAGTGGAGGGACTGGGA 63750900 46864 NM_000021.3(PSEN1):c.806G>A (p.Arg269His) PSEN1 Dec 23, 2010 MedGen:C1847200,OMIM:606889;MedGen:CN517202 Alzheimer disease, type 4;not provided not provided 14 73198067 TGGCTGTTTTGTGTCCGAAAGGTCCACTTCGTATGCTGGTTGAAACAGCTCAGGAGAGAAA 730882246 181441 NM_194279.3(ISCA2):c.229G>A (p.Gly77Ser) ISCA2 Nov 08, 2017 Human Phenotype Ontology:HP:0001522,MedGen:C1844947;Human Phenotype Ontology:HP:0001508,MedGen:C0231246;Human Phenotype Ontology:HP:0001263,MedGen:C4020875;MedGen:CN228271;MedGen:CN234684;MedGen:C4225348,OMIM:616370,Orphanet:ORPHA457406;Human Phenotype Ontology:HP:0008936,MedGen:C1853743;MedGen:CN228311;Human Phenotype Ontology:HP:0000648,MedGen:C0029124;Human Phenotype Ontology:HP:0002510,MedGen:C0426970;MedGen:CN517202 Death in infancy;Failure to thrive;Global developmental delay;High CSF lactic acid;Multiple mitochondrial dysfunctions syndrome;Multiple mitochondrial dysfunctions syndrome 4;Muscular hypotonia of the trunk;Neurodegeration;Optic atrophy;Spastic tetraplegia;not provided germline 14 74494329 TCAGAATTCCTCAGGCTGCAAGTGGAGGGAGGTGGATGCTCCGGATTCCAATACAAATTTT 794727001 190883 NM_015629.3(PRPF31):c.1073+1G>A PRPF31 Apr 01, 2015 MedGen:C1838601,OMIM:600138 Retinitis pigmentosa 11 germline 19 54128201 TGGACAGCGGAAGAAGCGAGGCGGCCGCAGGTGAGGGGCCCTGGGGGTCCGGTAGGCATGG 180177227 200501 NM_000030.2(AGXT):c.481G>A (p.Gly161Ser) AGXT Nov 27, 2014 MedGen:C0268164,OMIM:259900,Orphanet:ORPHA93598,SNOMED CT:65520001 Primary hyperoxaluria, type I germline 2 240871406 CTGTTCTTAACCCACGGGGAGTCGTCCACCGGCGTGCTGCAGCCCCTTGATGGCTTCGGGG 281864922 31098 NM_000824.4(GLRB):c.610+5G>A GLRB Oct 04, 2012 MedGen:C3553291,OMIM:614619 Hyperekplexia 2 germline 4 157136891 ACGTTGCAAGATGCAACTGGAGAGCTGTACGTAAATGAGAACATAATTGATTATGAAAATA 28937893 19559 NM_006005.3(WFS1):c.2146G>A (p.Ala716Thr) WFS1 Aug 17, 2017 MedGen:C0043207,OMIM:222300,Orphanet:ORPHA3463,SNOMED CT:70694009;MedGen:C1833021,OMIM:600965;MedGen:CN517202 Diabetes mellitus AND insipidus with optic atrophy AND deafness;WFS1-Related Disorders;not provided germline 4 6301941 TACGTCCGCGTGACTGACATCGACAACAGCGCCGAGTCTGCCATCAACATGCTCCCGTTCT 397508230 67953 NM_000492.3(CFTR):c.1584+1G>A CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline 7 117559656 AGCGTCATCAAAGCATGCCAACTAGAAGAGGTAAGAAACTATGTGAAAACTTTTTGATTAT 33930702 30558 NM_000518.4(HBB):c.3G>A (p.Met1Ile) HBB Feb 06, 2017 MedGen:C0271980,SNOMED CT:86715000;MedGen:CN517202;MedGen:CN169374 beta^0^ Thalassemia;not provided;not specified germline 11 5227019 TGTTCACTAGCAACCTCAAACAGACACCATGGTGCATCTGACTCCTGAGGAGAAGTCTGCC -1 469984 NM_003073.4(SMARCB1):c.1118+1G>A SMARCB1 Apr 16, 2017 MedGen:C1836327,OMIM:609322 Rhabdoid tumor predisposition syndrome 1 germline 22 23833704 GAAGATCCGCGACCAGGACAGGAACACGAGGTACCCCTGGCCCTGTGGTCCTGGGCTCTGC 121434411 21684 NM_003659.3(AGPS):c.1256G>A (p.Arg419His) AGPS Apr 24, 1998 MedGen:C1838612,OMIM:600121,Orphanet:ORPHA309803 Rhizomelic chondrodysplasia punctata type 3 germline 2 177493170 TAAAACAGAGATGTGCTCCGGCATCTATTCGCCTCATGGACAACAAGCAGTTTCAGTTTGG 765696008 228162 NM_000527.4(LDLR):c.1187-10G>A LDLR Mar 30, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000;MedGen:CN118841 Familial hypercholesterolemia;Familial hypercholesterolemias germline 19 11113268 GTCCCCTCTGACCCCCTGACCTCGCTCCCCGGACCCCCAGGCTCCATCGCCTACCTCTTCT 121908359 19910 NM_023067.3(FOXL2):c.560G>A (p.Gly187Asp) FOXL2 Feb 05, 2015 MedGen:C0220663,OMIM:110100,Orphanet:ORPHA126;MedGen:C1837008,OMIM:608996 Blepharophimosis, ptosis, and epicanthus inversus;Premature ovarian failure 3 germline 3 138946163 GCGTGGCGGGCGCCGGGGCCGACGGCTACGGCTACCTGGCGCCCCCCAAGTACCTGCAGTC 119103287 259892 NM_000127.2(EXT1):c.1019G>A (p.Arg340His) EXT1 Apr 07, 2015 MedGen:CN517202 not provided germline 8 117837145 ATGCCACTTTCTGTCTGGTTCCTCGTGGTCGCAGGCTTGGGTCCTTCAGATTCCTGGAGGC 587783432 168599 NM_017780.3(CHD7):c.2613+1G>A CHD7 Feb 08, 2013 MedGen:C0265354,OMIM:214800,Orphanet:ORPHA138,SNOMED CT:47535005 CHARGE association germline 8 60816502 AAGCAGGGCCAGAACAAGTTCCTTTCAGAGGTACGACATACCTGCTTACTTTTCCAAAGTA 587779456 106893 NM_000090.3(COL3A1):c.2978G>A (p.Gly993Asp) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189005396 CAGGAGCTAACGGTCTCAGTGGAGAACGTGGTCCCCCTGGACCCCAGGGTCTTCCTGGTCT -1 434149 NM_174936.3(PCSK9):c.1174G>A (p.Val392Met) PCSK9 - MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 1 55057508 CAGAGTGGGACATCACAGGCTGCTGCCCACGTGGCTGGTAAGTCACCACCCCACTGCCTCG 104886350 35591 NM_000495.4(COL4A5):c.232-1G>A COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108563881 GACAAAAACCTAAAAATATTGCATTTTTCAGGGTGATGATGGAATTCCAGGGCCACCAGGA 773073663 209951 NM_000118.3(ENG):c.1272+1G>A ENG May 12, 2015 MedGen:CN517202 not provided germline 9 127819899 CAGGTGTCAGCAAGTATGATCAGCAATGAGGTAAGAGCTGGGGCCAAAAAGGTATCAGGAC 121965042 15194 NM_000274.3(OAT):c.812G>A (p.Arg271Lys) OAT Feb 15, 1992 Human Phenotype Ontology:HP:0012026,MedGen:C0599035,OMIM:258870,SNOMED CT:276426004 Ornithine aminotransferase deficiency germline 10 124403015 TTGCTGATGAAATACAGACAGGATTGGCCAGAACTGGTAGATGGCTGGCTGTTGATTATGA 587782050 151555 NM_024675.3(PALB2):c.3476G>A (p.Trp1159Ter) PALB2 Apr 22, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 16 23603544 CCCTCCTCCCACCTGTCTCTGACCAACATTGGTCTTTTGTGAAATGGTCGGGTACAGACTC 886039714 259830 NM_005654.5(NR2F1):c.262G>A (p.Val88Met) NR2F1 Aug 12, 2016 MedGen:CN517202 not provided germline 5 93585285 GGCCAGAGCCAGCAGCACATCGAGTGCGTGGTGTGCGGGGACAAGTCGAGCGGCAAGCACT 587776693 23531 NM_001127221.1(CACNA1A):c.3992+1G>A CACNA1A Nov 01, 1996 MedGen:C1720416,OMIM:108500,Orphanet:ORPHA97,SNOMED CT:420932006 Episodic ataxia type 2 germline 19 13275849 CAGTGGGGCCCTGGTAGCCTTTGCCTTCACGTAAGTCTCCTCGCAAGGGTTCCTCTTGCCT 774518779 260039 NM_004004.5(GJB2):c.506G>A (p.Cys169Tyr) GJB2 Oct 10, 2017 MedGen:C2673759,OMIM:220290;MedGen:CN517202 Deafness, autosomal recessive 1A;not provided germline 13 20189076 ACGGCTTCTCCATGCAGCGGCTGGTGAAGTGCAACGCCTGGCCTTGTCCCAACACTGTGGA 61214927 29557 NM_170707.3(LMNA):c.688G>A (p.Asp230Asn) LMNA Feb 01, 2007 MedGen:C1720860,OMIM:151660,Orphanet:ORPHA2348;MedGen:CN517202 Familial partial lipodystrophy 2;not provided germline 1 156134853 CGCCGTCATGAGACCCGACTGGTGGAGATTGACAATGGGAAGCAGCGTGAGTTTGAGAGCC 267608680 49672 NM_007055.3(POLR3A):c.3991G>A (p.Ala1331Thr) POLR3A Aug 02, 2012 MedGen:C1843200,OMIM:607694 Hypomyelinating leukodystrophy 7 not provided 10 77980174 TTTGAGAAGACGGCTGACCATCTCTTTGACGCTGCCTACTTCGGGCAGAAGGACTCTGTGT -1 428195 NM_015175.2(NBEAL2):c.1793G>A (p.Trp598Ter) NBEAL2 Dec 28, 2016 MedGen:C0272302,OMIM:139090,SNOMED CT:51720005 Gray platelet syndrome germline 3 46995528 CGGGCATCATGGTACCCCCTGTACAGCGATGGCCAGGGCCTGGCTTCACCTTTCATGCCTG 398123937 100489 NM_004006.2(DMD):c.3432+1G>A DMD Aug 27, 2013 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009;MedGen:C3668940,OMIM:302045;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Becker muscular dystrophy;Dilated cardiomyopathy 3B;Duchenne muscular dystrophy germline X 32463438 AACACTCAGTGGGATCACATGTGCCAACAGGTATAGACAATCTCTTTCACTGTGGCTTGCC 587784491 169007 NM_006009.3(TUBA1A):c.5G>A (p.Arg2His) TUBA1A Oct 03, 2015 MeSH:D030342,MedGen:C0950123;MedGen:C1969029,OMIM:611603,Orphanet:ORPHA102011;MedGen:CN517202 Inborn genetic diseases;Lissencephaly 3;not provided germline 12 49186832 TACGATTTTTTCACTTTTCCTCCCCACAGCGTGAGTGCATCTCCATCCACGTTGGCCAGGC 757486575 211548 NM_007103.3(NDUFV1):c.349G>A (p.Ala117Thr) NDUFV1 Jun 08, 2012 MedGen:CN517202 not provided germline 11 67609474 CCCTGCAGGCCCAAGTATCTGGTGGTGAACGCAGACGAGGGGGAGCCGGGCACCTGCAAGG 104886084 35687 NM_000495.4(COL4A5):c.937G>A (p.Gly313Ser) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108582884 TGATGTCACCCTATCCTCTATGTTTTAAAGGGTTTGCCTGGTGATCCTGGTTACCCTGGTG 1060502287 397247 NM_000264.4(PTCH1):c.708G>A (p.Trp236Ter) PTCH1 Jan 05, 2017 MedGen:C0004779,OMIM:109400,Orphanet:ORPHA377,SNOMED CT:69408002 Gorlin syndrome germline 9 95481987 TTTGATTATTACACCTTTGGACTGCTTCTGGGAAGGGGCGAAATTACAGTCTGGGACAGCA 1060499548 361695 NM_007313.2(ABL1):c.1066G>A (p.Ala356Thr) ABL1 Aug 02, 2017 Human Phenotype Ontology:HP:0011842,MedGen:C4023165;MedGen:CN368510,OMIM:617602;MedGen:C0152021,SNOMED CT:13213009;Human Phenotype Ontology:HP:0001508,MedGen:C0231246;MedGen:CN517202 Abnormality of skeletal morphology;CONGENITAL HEART DEFECTS AND SKELETAL MALFORMATIONS SYNDROME;Congenital heart disease;Failure to thrive;not provided de novo;germline 9 130872961 CTGAGGGAGTGCAACCGGCAGGAGGTGAACGCCGTGGTGCTGCTGTACATGGCCACTCAGA 112445441 27619 NM_033360.3(KRAS):c.38G>A (p.Gly13Asp) KRAS Mar 10, 2016 Human Phenotype Ontology:HP:0004808,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:ORPHA519,SNOMED CT:17788007;MedGen:C0858252,Orphanet:ORPHA213528;MeSH:D015179,MedGen:CN236642;Human Phenotype Ontology:HP:0012209,MedGen:C0349639,OMIM:607785,Orphanet:ORPHA86834;Human Phenotype Ontology:HP:0100031,MeSH:D013964,MedGen:C0040136,Orphanet:ORPHA100087;Human Phenotype Ontology:HP:0030358,MeSH:D002289,MedGen:C0007131,SNOMED CT:254637007;MeSH:D010051,MedGen:CN236629;MedGen:C2674723,OMIM:614470,Orphanet:ORPHA268114 Acute myeloid leukemia;Breast adenocarcinoma;Colorectal Neoplasms;Juvenile myelomonocytic leukemia;Neoplasm of the thyroid gland;Non-small cell lung cancer;Ovarian Neoplasms;RAS-associated autoimmune leukoproliferative disorder somatic 12 25245347 AATATAAACTTGTGGTAGTTGGAGCTGGTGGCGTAGGCAAGAGTGCCTTGACGATACAGCT 374143224 187013 NM_000152.4(GAA):c.1979G>A (p.Arg660His) GAA Apr 25, 2017 MedGen:C0017921,OMIM:232300,Orphanet:ORPHA365,SNOMED CT:124462004,SNOMED CT:237967002;MedGen:CN517202 Glycogen storage disease, type II;not provided germline;unknown 17 80112966 TGGGCAACACCTCAGAGGAGCTGTGTGTGCGCTGGACCCAGCTGGGGGCCTTCTACCCCTT 1114167482 419813 NM_130799.2(MEN1):c.1022G>A (p.Trp341Ter) MEN1 Feb 21, 2017 MedGen:C0027672,SNOMED CT:699346009;MeSH:D018761,MedGen:C0025267,OMIM:131100,Orphanet:ORPHA652,SNOMED CT:30664006 Hereditary cancer-predisposing syndrome;Multiple endocrine neoplasia, type 1 germline 11 64806259 ACCGCAATGTGCGGGAAGCCCTGCAGGCCTGGGCGGACACGGCCACTGTCATCCAGGAGTG 397514580 48358 NM_000162.3(GCK):c.1015G>A (p.Glu339Lys) GCK Nov 06, 2012 MedGen:C1841962,OMIM:125851 Maturity-onset diabetes of the young, type 2 germline 7 44146467 GCCTTCGAGACGCGCTTCGTGTCGCAGGTGGAGAGGTGTGCGGAGGAGGAGGGTGGGTGCA 63751241 426806 NM_001171.5(ABCC6):c.4198G>A (p.Glu1400Lys) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16154638 CAGCTGCAGTACAAGTGTGCTGACCGAGGCGAGGACCTGAGGTATGGTCGTCCCACCATGG 121918093 28494 NM_000371.3(TTR):c.118G>A (p.Val40Ile) TTR Aug 24, 2017 MedGen:C2751492,OMIM:105210,SNOMED CT:43532007,SNOMED CT:442012008;MedGen:CN517202 Amyloidogenic transthyretin amyloidosis;not provided germline 18 31592944 TGTCCTCTGATGGTCAAAGTTCTAGATGCTGTCCGAGGCAGTCCTGCCATCAATGTGGCCG 121912299 47542 NM_001363.4(DKC1):c.1204G>A (p.Gly402Arg) DKC1 May 10, 2012 MedGen:C1148551,OMIM:305000 Dyskeratosis congenita X-linked germline X 154774650 ATGATCAAGCAGGGCCTTCTGGACAAGCATGGGAAGCCCACAGACAGCACACCTGCCACCT 587777588 152013 NM_002880.3(RAF1):c.709G>A (p.Ala237Thr) RAF1 Jun 01, 2014 MedGen:C4014656,OMIM:615916 Cardiomyopathy, dilated, 1NN germline 3 12604261 AGTTCTCAGCACAGATATTCTACACCTCACGCCTTCACCTTTAACACCTCCAGTCCCTCAT 33933298 30280 NM_000518.4(HBB):c.295G>A (p.Val99Met) HBB Apr 24, 2017 na;Human Phenotype Ontology:HP:0005511,MedGen:C0700299,OMIM:140700,Orphanet:ORPHA178330;MedGen:C0019045,Orphanet:ORPHA68364,SNOMED CT:80141007;MedGen:CN169374 HEMOGLOBIN MEDICINE LAKE;Heinz body anemia;Hemoglobinopathy;not specified germline 11 5226597 CTGAGTGAGCTGCACTGTGACAAGCTGCACGTGGATCCTGAGAACTTCAGGGTGAGTCTAT 886041903 264923 NM_000489.4(ATRX):c.5957-1G>A ATRX Jul 26, 2016 MedGen:CN517202 not provided germline X 77593850 TACCTACTTATGTTCCATTTGTCTTATTTAGGTAAAGCTACTTCTTCTTCTAATCCAAGCA 587777770 143178 NM_006623.3(PHGDH):c.418G>A (p.Gly140Arg) PHGDH Jun 05, 2014 MedGen:CN032230,OMIM:256520;MedGen:CN517202 Neu-Laxova syndrome 1;not provided germline 1 119727010 TTCCTTTTGCCTGTTTGGTTGCAGTTCATGGGAACAGAGCTGAATGGAAAGACCCTGGGAA 104894062 16213 NM_000497.3(CYP11B1):c.1121G>A (p.Arg374Gln) CYP11B1 Jul 01, 2009 MedGen:C0268292,OMIM:202010,Orphanet:ORPHA90795,SNOMED CT:124214007 Deficiency of steroid 11-beta-monooxygenase germline 8 142875712 TGCTGCGTGCGGCCCTCAAGGAGACCTTGCGGTGGGTGCTGGCTGAGGCCTCCCTGTGGCC 267607183 16090 NM_022489.3(INF2):c.653G>A (p.Arg218Gln) INF2 Jan 01, 2010 MedGen:C2750475,OMIM:613237 Focal segmental glomerulosclerosis 5 germline 14 104703440 CCGAGGACCTGCGCGCGCGCACCCAGCTGCGGAACGAGTTTATCGGTAAGCACCTGCCCTG 122454123 26714 NM_006306.3(SMC1A):c.1487G>A (p.Arg496His) SMC1A Feb 01, 2009 MedGen:C1802395,OMIM:300590,SNOMED CT:55016009 Congenital muscular hypertrophy-cerebral syndrome germline X 53409120 ATGCCCGCATCGACCGCCAGGAGAGCAGCCGCCAGCAGCGAAAGGCAGAGATAATGGAAAG 121909596 31977 NM_006891.3(CRYGD):c.176G>A (p.Arg59His) CRYGD Sep 01, 2007 Human Phenotype Ontology:HP:0010926,MedGen:C1861832,OMIM:115700 Cataract 4 germline 2 208124188 CCAACTACTCGGGCCTCCAGTACTTCCTGCGCCGCGGCGACTATGCCGACCACCAGCAGTG 794729116 198395 NM_004572.3(PKP2):c.2299+1G>A PKP2 May 01, 2012 MedGen:CN517202 not provided germline 12 32802402 CCCGGAATCTTTCTCTGCAGAATGAAATTGGTGAGTCGGTATAAGTATCTATGTGTAATAT 104886187 35878 NM_000495.4(COL4A5):c.2555G>A (p.Gly852Glu) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108620304 CAGGAGAGAAGGGGGATCCAGGACCTCCTGGACTTGATGTTCCAGGACCCCCAGGTGAAAG 370479598 430078 NM_005912.2(MC4R):c.181G>A (p.Glu61Lys) MC4R Aug 30, 2016 MedGen:C0028754,OMIM:601665,Orphanet:ORPHA71529,SNOMED CT:414916001;MedGen:CN233047;MedGen:CN517202 Obesity;Obesity, autosomal dominant;not provided germline 18 60372169 TTTGTGACTCTGGGTGTCATCAGCTTGTTGGAGAATATCTTAGTGATTGTGGCAATAGCCA 80338775 15889 NM_080669.5(SLC46A1):c.1082-1G>A SLC46A1 Dec 08, 2011 MedGen:C0342705,OMIM:229050,Orphanet:ORPHA90045,SNOMED CT:62578003 Congenital defect of folate absorption germline 17 28402322 ATTTTCCTGATGAGTGTTTGTTTCTCCACAGGATATGGGTTGCTTTTCCTGTCATTAGTCA 786201031 181572 NM_015330.4(SPECC1L):c.3247G>A (p.Gly1083Ser) SPECC1L Feb 01, 2015 Gene:8221,MedGen:C1801950,OMIM:145410,Orphanet:ORPHA306588 Opitz G/BBB syndrome germline 22 24412690 ATGCTGGCTTTCCAGGCAGCTGAAAGTGTCGGCATCAAATCCACACTGGTGAGCCCTTGTC 794728740 196603 NM_001035.2(RYR2):c.5170G>A (p.Glu1724Lys) RYR2 Apr 27, 2015 MedGen:CN517202 not provided germline 1 237614298 TATGCCACTGCCAGGCTCATGATGAACAACGAGTACATTGTCCCCATGACGGAGGAGACGA 759922477 481454 NM_020320.4(RARS2):c.1237+1G>A RARS2 Dec 07, 2017 MedGen:C1969084,OMIM:611523,Orphanet:ORPHA166073 Pontocerebellar hypoplasia type 6 paternal 6 87519582 GGATGCTACAGAACATGGCTTCAATTAAGAGTGAATTCAGTTTTTTCTTATTAAAGTCATA 587779489 106930 NM_000090.3(COL3A1):c.1330G>A (p.Gly444Arg) COL3A1 Feb 10, 2016 MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000;MedGen:CN517202 Ehlers-Danlos syndrome, type 4;not provided germline 2 188994577 CCTGGTAAGAATGGTGCCAAAGGAGAGCCCGGACCACGTGGTGAACGCGTAAGTTTTACTG 121908182 19528 NM_020451.2(SELENON):c.818G>A (p.Gly273Glu) SELENON Sep 01, 2001 MedGen:C0410180,OMIM:602771,SNOMED CT:240063002 Eichsfeld type congenital muscular dystrophy germline 1 25809096 CCTTTGTGAAGACCCGCTTTGCCCCTCAGGGAGCTGTGGCCTGCCTGACTGCCATCAGCGA 45506401 58406 NM_000548.4(TSC2):c.3131+1G>A TSC2 Jan 18, 2016 MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000;MedGen:CN517202 Tuberous sclerosis syndrome;not provided germline 16 2079197 CTTCTCCAACTTCACGGCTGTCCCGAAGAGGTCCAGGCGGCACTACAGGGCTGGGCGGGCC 104894469 28818 NM_006194.3(PAX9):c.151G>A (p.Gly51Ser) PAX9 Aug 01, 2009 MedGen:C1970291,OMIM:604625 Tooth agenesis, selective, 3 germline 14 36663043 GACATCAGCCGCCAGCTACGGGTCTCGCACGGCTGCGTCAGCAAGATCCTGGCGCGATACA 267606905 29191 NM_002471.3(MYH6):c.4369G>A (p.Glu1457Lys) MYH6 Jul 05, 2005 MedGen:C2750466,OMIM:613252 Dilated cardiomyopathy 1EE germline 14 23387914 GTGAGCCTTGTCCCCGGGCAGATCCTGGCCGAGTGGAAGCAGAAGTATGAGGAGTCGCAGT 62636275 20778 NM_201253.2(CRB1):c.3307G>A (p.Gly1103Arg) CRB1 Apr 01, 2016 MedGen:C3151202,OMIM:613835;MedGen:C1838647,OMIM:600105;MedGen:CN517202 Leber congenital amaurosis 8;Retinitis pigmentosa 12;not provided germline 1 197435170 CTGCAAGGGTGTCTAAGTACAATAGAAATCGGAGGCATTTATCTCTCTTACTTTGAAAATG 137852515 25047 NM_000216.3(ANOS1):c.1540G>A (p.Glu514Lys) ANOS1 May 01, 1998 MedGen:C1563719,OMIM:308700 Kallmann syndrome 1 germline X 8536852 CCAATACGGCCAAAAAGTCACTCCAAGGCAGAAGCTGTTTTCTTCACTACTCCACCATGCT 766474188 434282 NM_000527.4(LDLR):c.1187G>A (p.Gly396Asp) LDLR - MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11113278 ACCCCCTGACCTCGCTCCCCGGACCCCCAGGCTCCATCGCCTACCTCTTCTTCACCAACCG 786204986 187596 NM_003159.2(CDKL5):c.464-1G>A CDKL5 Mar 13, 2014 MedGen:C2748910,Orphanet:ORPHA3095 Atypical Rett syndrome unknown X 18584262 AGTTACAACTTTGGACTTTGCTATCTTTCAGGTTTTGCTCGTAATCTGTCAGAAGGCAATA 28999969 27582 NM_001128177.1(THRB):c.994G>A (p.Gly332Arg) THRB Jul 20, 2016 MedGen:C2937288,OMIM:188570;MedGen:CN517202 Thyroid hormone resistance, generalized, autosomal dominant;not provided germline 3 24127649 GACCCAGAAAGTGAGACTTTAACCTTGAATGGGGAAATGGCAGTGACACGGGGCCAGCTGA 137853219 31002 NM_000515.4(GH1):c.59G>A (p.Trp20Ter) GH1 May 01, 1993 MedGen:C0342573,OMIM:262400,Orphanet:ORPHA231662,SNOMED CT:71003000 Ateleiotic dwarfism germline 17 63918458 TCCTGGCTTTTGGCCTGCTCTGCCTGCCCTGGCTTCAAGAGGGCAGTGCCTTCCCAACCAT 878853277 237804 NM_001183.5(ATP6AP1):c.1036G>A (p.Glu346Lys) ATP6AP1 Feb 13, 2017 MedGen:C3151226,OMIM:613860,Orphanet:ORPHA331190 Immunodeficiency due to ficolin 3 deficiency germline X 154435338 GCCCGGCACTGGTTTACCATGGAGCGCCTCGAAGTCCACAGCAATGGCTCCGTCGCCTACT 137852247 213664 NM_000133.3(F9):c.835G>A (p.Ala279Thr) F9 Jul 15, 2014 MedGen:C0008533,OMIM:306900,Orphanet:ORPHA98879,SNOMED CT:41788008 Hereditary factor IX deficiency disease germline X 139560852 GTTGAAACTGGTGTTAAAATTACAGTTGTCGCAGGTAAATACACAGAAAGAATAATAATCT 794727349 192791 NM_153240.4(NPHP3):c.2994G>A (p.Trp998Ter) NPHP3 Jan 30, 2015 MedGen:C1858392,OMIM:604387,SNOMED CT:444749006 Adolescent nephronophthisis germline 3 132688781 CCACCAACTAGCAAGTGTATACGTGCAGTGGAAGAAGTTTGGCAATGCAGAACAACTGTAT 80338862 34124 NM_001360.2(DHCR7):c.1228G>A (p.Gly410Ser) DHCR7 Jul 11, 2017 MedGen:C0175694,OMIM:270400,Orphanet:ORPHA818,SNOMED CT:43929004;MedGen:CN517202 Smith-Lemli-Opitz syndrome;not provided germline;unknown 11 71435575 TGGGGCGTGGCCCGCCACTTCAACTACGTCGGCGACCTGATGGGCAGCCTGGCCTACTGCC 1802959 33024 NM_000295.4(SERPINA1):c.1078G>A (p.Ala360Thr) SERPINA1 Jul 15, 2016 MedGen:C0221757,OMIM:613490,Orphanet:ORPHA60,SNOMED CT:30188007;na Alpha-1-antitrypsin deficiency;PI W(BETHESDA) germline 14 94378628 TGCTTCTCTCCCCTCCAGGCCGTGCATAAGGCTGTGCTGACCATCGACGAGAAAGGGACTG -1 471333 NM_006702.4(PNPLA6):c.3389G>A (p.Trp1130Ter) PNPLA6 Aug 04, 2017 MedGen:C2677586,OMIM:612020,Orphanet:ORPHA139480 Spastic paraplegia 39 germline 19 7558955 GCACCTACGGGGACAGCCTGTCCGGCTGGTGGCTGCTGTGGAAGCGGCTGAATCCCTGGGC 193922566 45113 NM_000527.4(LDLR):c.1055G>A (p.Cys352Tyr) LDLR Apr 11, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000;MedGen:CN517202 Familial hypercholesterolemia;not provided germline;unknown 19 11110766 ACGGCTTCCAGCTGGTGGCCCAGCGAAGATGCGAAGGTGATTCCCGGGTGGGACTGAGCCC 104886460 99352 NM_001005741.2(GBA):c.115+1G>A GBA Aug 11, 2016 MedGen:C0268250,OMIM:230900,Orphanet:ORPHA77260,SNOMED CT:12246008;MedGen:C0017205,Orphanet:ORPHA355;MedGen:C1961835,OMIM:230800,SNOMED CT:62201009 Acute neuronopathic Gaucher's disease;Gaucher disease;Gaucher's disease, type 1 germline;unknown 1 155240629 TTCTACTTCAGGCAGTGTCGTGGGCATCAGGTGAGTGAGTCAAGGCAGTGGGGAGGTAGCA 886037631 44198 NM_018475.4(TMEM165):c.910G>A (p.Gly304Arg) TMEM165 Jul 18, 2012 MedGen:C3553571,OMIM:614727,Orphanet:ORPHA314667 Congenital disorder of glycosylation type 2k germline 4 55425387 TTTTTTCTCTCTCTTCCAGTGACAATCATAGGAGGCATCGTTTTTTTGGCGTTTGCATTTT 28934576 27405 NM_000546.5(TP53):c.818G>A (p.Arg273His) TP53 Jul 14, 2017 Human Phenotype Ontology:HP:0004808,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:ORPHA519,SNOMED CT:17788007;Human Phenotype Ontology:HP:0030078,MeSH:C538231,MedGen:C0152013;MedGen:C0007112;MedGen:C0278701;Human Phenotype Ontology:HP:0006744,MeSH:D018268,MedGen:C0206686,Orphanet:ORPHA1501;MedGen:C1859972,OMIM:202300;MedGen:C3553606,OMIM:614740;Human Phenotype Ontology:HP:0010796,MedGen:C0677865;MedGen:C0699790,OMIM:114500,SNOMED CT:269533000;Human Phenotype Ontology:HP:0011459,MedGen:C0152018,Orphanet:ORPHA70482;MeSH:C562463,MedGen:C0235974,OMIM:260350,Orphanet:ORPHA217074,SNOMED CT:372142002;Human Phenotype Ontology:HP:0200022,MedGen:C0205770,OMIM:260500,Orphanet:ORPHA2807,SNOMED CT:18021007;Human Phenotype Ontology:HP:0005550,MeSH:D015451,MedGen:C0023434,OMIM:151400,SNOMED CT:277473004,SNOMED CT:51092000;MeSH:D015179,MedGen:CN236642;MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;Human Phenotype Ontology:HP:0100843,MeSH:D005909,MedGen:C0017636,SNOMED CT:63634009;MedGen:C2750850,OMIM:137800;MedGen:C2239176,OMIM:114550,Orphanet:ORPHA88673,SNOMED CT:187769009,SNOMED CT:25370001;MedGen:C2239176,OMIM:114550,Orphanet:ORPHA88673,SNOMED CT:187769009,SNOMED CT:25370001;MedGen:C0027672,SNOMED CT:699346009;MedGen:C0085390,Orphanet:ORPHA524,SNOMED CT:428850001;Gene:553989,MedGen:C1835398,OMIM:151623;Gene:553989,MedGen:C1835398,OMIM:151623;MeSH:C562393,MedGen:C0151779,SNOMED CT:93655004;MedGen:C0153574,Orphanet:ORPHA213569;Human Phenotype Ontology:HP:0002885,MeSH:D008527,MedGen:C0025149,OMIM:155255,Orphanet:ORPHA616;Human Phenotype Ontology:HP:0006775,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:ORPHA29073,SNOMED CT:109989006,SNOMED CT:55921005;Gene:257641,MedGen:C2931822,OMIM:607107;MeSH:D009369,MedGen:C0027651,SNOMED CT:108369006;Human Phenotype Ontology:HP:0030692,MeSH:D001932,MedGen:C0006118,SNOMED CT:126952004;Human Phenotype Ontology:HP:0100013,MeSH:D001943,MedGen:C1458155,Orphanet:ORPHA180250,SNOMED CT:126926005;Human Phenotype Ontology:HP:0002669,MeSH:D012516,MedGen:C0029463,OMIM:259500,Orphanet:ORPHA668,SNOMED CT:21708004;MedGen:C0279663;Human Phenotype Ontology:HP:0006725,MedGen:C0281361;Gene:7864,Human Phenotype Ontology:HP:0030357,MeSH:D055752,MedGen:C0149925,OMIM:182280,Orphanet:ORPHA70573;Human Phenotype Ontology:HP:0030359,MedGen:C0149782;MeSH:C535575,MedGen:C1168401,OMIM:275355,Orphanet:ORPHA67037;Human Phenotype Ontology:HP:0011779,MedGen:C0238461,Orphanet:ORPHA142;Human Phenotype Ontology:HP:0006740,MedGen:C0279680;MedGen:C0280630;MedGen:CN517202;MedGen:CN169374 Acute myeloid leukemia;Adenocarcinoma of lung;Adenocarcinoma of prostate;Adenocarcinoma of stomach;Adrenocortical carcinoma;Adrenocortical carcinoma, hereditary;Basal cell carcinoma, susceptibility to, 7;Brainstem glioma;Carcinoma of colon;Carcinoma of esophagus;Carcinoma of pancreas;Choroid plexus papilloma;Chronic lymphocytic leukemia;Colorectal Neoplasms;Familial cancer of breast;Glioblastoma;Glioma susceptibility 1;Hepatocellular carcinoma;Hepatocellular carcinoma;Hereditary cancer-predisposing syndrome;Li-Fraumeni syndrome;Li-Fraumeni syndrome 1;Li-Fraumeni syndrome 1;Malignant melanoma of skin;Malignant neoplasm of body of uterus;Medulloblastoma;Multiple myeloma;Nasopharyngeal carcinoma;Neoplasm;Neoplasm of brain;Neoplasm of the breast;Osteosarcoma;Ovarian Serous Cystadenocarcinoma;Pancreatic adenocarcinoma;Small cell lung cancer;Squamous cell carcinoma of lung;Squamous cell carcinoma of the head and neck;Thyroid cancer, anaplastic;Transitional cell carcinoma of the bladder;Uterine Carcinosarcoma;not provided;not specified germline;somatic;unknown 17 7673802 ATCTACTGGGACGGAACAGCTTTGAGGTGCGTGTTTGTGCCTGTCCTGGGAGAGACCGGCG 80358997 67062 NM_000059.3(BRCA2):c.7721G>A (p.Trp2574Ter) BRCA2 Sep 08, 2016 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome germline 13 32357845 CTGAAGATTATTTTGGTAAGGAAAGTTTATGGACTGGAAAAGGAATACAGTTGGCTGATGG 886041978 361912 NM_003165.3(STXBP1):c.902+1G>A STXBP1 Sep 09, 2016 MedGen:C2677326,OMIM:612164 Early infantile epileptic encephalopathy 4 germline 9 127668188 GCGCCACAAGCACATCGCAGAGGTGTCCCAGTAAGAGCCCCCTGCCCCCTTCTCCAGCGAG 202247814 47472 NM_000282.3(PCCA):c.412G>A (p.Ala138Thr) PCCA May 17, 2012 Human Phenotype Ontology:HP:0003353,MedGen:C0268579,OMIM:606054,Orphanet:ORPHA35 Propionic acidemia not provided 13 100155090 ATGGAAGCCATTAAGAAAACCAGGGCCCAAGCTGTGAGTCTGAATGAATCTATCTACTGCA 281865128 204408 NM_000530.7(MPZ):c.487G>A (p.Gly163Arg) MPZ Apr 05, 2017 MedGen:C0270912,OMIM:118200,Orphanet:ORPHA101082,SNOMED CT:42986003;MedGen:C0751036,Orphanet:ORPHA65753,SNOMED CT:398040009 Charcot-Marie-Tooth disease, demyelinating, type 1b;Charcot-Marie-Tooth disease, type I germline 1 161306426 AGGTACGGGGTCGTTCTGGGAGCTGTGATCGGGGGTGTCCTCGGGGTGGTGCTGTTGCTGC 398124397 102011 NM_024312.4(GNPTAB):c.1298G>A (p.Trp433Ter) GNPTAB Aug 28, 2013 MedGen:C2673377,OMIM:252500,Orphanet:ORPHA576 I cell disease germline 12 101768147 CTTTGGTTTTATCGTAGGTTTATTTGACATGGCCTGTGCCAAACTGTGCCGAGGGCTGCCC 121434516 19105 NM_015474.3(SAMHD1):c.625G>A (p.Gly209Ser) SAMHD1 Mar 13, 2014 MedGen:C2749659,OMIM:612952 Aicardi Goutieres syndrome 5 germline 20 36930760 GTTCAGATTGCTGGACTTTGTCATGATCTCGGTAAGCTGTACAAAGAGACAAAGTTGTTAT 753861836 267711 NM_003494.3(DYSF):c.5668-7G>A DYSF Jul 21, 2017 MedGen:C1850889,OMIM:253601,Orphanet:ORPHA268;MedGen:C1850808,OMIM:254130,Orphanet:ORPHA45448;MedGen:CN517202 Limb-girdle muscular dystrophy, type 2B;Miyoshi muscular dystrophy 1;not provided germline 2 71674190 CTTCCTTGCATCCTTCTCTGTTCCTCTTCCGGGTCAGGATGCCTTCTGGAGGCTGGACAAG 863225276 214499 NM_015560.2(OPA1):c.1202G>A (p.Gly401Asp) OPA1 Nov 12, 2015 MedGen:C0338508,OMIM:165500,Orphanet:ORPHA98672,SNOMED CT:2065009 Dominant hereditary optic atrophy germline 3 193643434 TACAGAGGATGGTGCTTGTTGACTTACCAGGTGTGATTAATGTAAGTATATACAAAACATG 180177154 24979 NM_002764.3(PRPS1):c.916G>A (p.Gly306Arg) PRPS1 Jan 01, 2010 MedGen:C1844677,OMIM:304500,OMIM:304590 Deafness, X-linked 1 germline X 107649991 CTTGCAGAAGCCATCAGGAGAACTCACAATGGAGAATCCGTTTCTTACCTATTCAGCCATG 886044295 274106 NM_001080522.2(CC2D2A):c.4179+1G>A CC2D2A Aug 03, 2016 MedGen:C2676788,OMIM:612285;MedGen:C2676790,OMIM:612284 Joubert syndrome 9;Meckel syndrome type 6 germline 4 15587930 TGGCTGTTGATGGGCAATGCTATTCCTGAGGTAAGACCACATAGGCTGCCTTTAACAGAGG 886039564 259689 NM_022336.3(EDAR):c.1073G>A (p.Arg358Gln) EDAR Aug 16, 2016 MedGen:CN517202 not provided germline 2 108897181 TGCCATTTGATTGCCTCGAGAAGACTAGCCGAATGCTCAGCTCCACGTACAACTCTGAGAA 104886361 35896 NM_000495.4(COL4A5):c.2705G>A (p.Gly902Glu) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108621830 AAGGTACCAAAGGTGAAATGGGTATGATGGGACCTCCAGGCCCACCAGGACCTTTGGGAAT 80357239 70101 NM_007294.3(BRCA1):c.5154G>A (p.Trp1718Ter) BRCA1 Jan 01, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 1;Hereditary cancer-predisposing syndrome;not provided germline 17 43063372 GTAACCTGTCTTTTCTATGATCTCTTTAGGGGTGACCCAGTCTATTAAAGAAAGAAAAATG 104893986 17497 NM_000434.3(NEU1):c.69G>A (p.Trp23Ter) NEU1 Jan 01, 2004 MedGen:C0268226,OMIM:256550 Sialidosis, type II germline 6 31862708 ACGCTGGGGGCCGCGGATTCTGGGCTTCTGGGGAGGCTGTAGGGTTTGGGTGTTTGCCGCG 121912973 31999 NM_000394.3(CRYAA):c.347G>A (p.Arg116His) CRYAA Jul 16, 2015 MedGen:C1858679,OMIM:604219;MedGen:CN071376;MedGen:CN517202 Cataract, autosomal dominant;Cataract, autosomal dominant, multiple types, with microcornea;not provided germline 21 43172105 ACCACGGCTACATTTCCCGTGAGTTCCACCGCCGCTACCGCCTGCCGTCCAACGTGGACCA 121908001 18905 NM_000053.3(ATP7B):c.2071G>A (p.Gly691Arg) ATP7B Sep 24, 2014 MedGen:C0019202,OMIM:277900,Orphanet:ORPHA905,SNOMED CT:88518009 Wilson disease germline;unknown 13 51960198 TCCATGGTCCTGGACCACAACATCATTCCAGGACTGTCCATTCTAAATCTCATCTTCTTTA 397516444 224955 NM_000551.3(VHL):c.485G>A (p.Cys162Tyr) VHL Feb 26, 2016 MedGen:C0019562,OMIM:193300,Orphanet:ORPHA892,SNOMED CT:46659004 Von Hippel-Lindau syndrome germline 3 10149808 CCCTTCCAGTGTATACTCTGAAAGAGCGATGCCTCCAGGTTGTCCGGAGCCTAGTCAAGCC 121917985 79472 NM_006920.4(SCN1A):c.715G>A (p.Ala239Thr) SCN1A Dec 20, 2014 MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002 Severe myoclonic epilepsy in infancy de novo;unknown 2 166051968 TTTCTTTCAGGCCTGAAAACCATTGTGGGAGCCCTGATCCAGTCTGTGAAGAAGCTCTCAG -1 446872 NM_001142966.2(GREB1L):c.5068G>A (p.Val1690Met) GREB1L Dec 18, 2017 MedGen:CN703737,OMIM:617805 RENAL HYPODYSPLASIA/APLASIA 3 germline 18 21515583 AGCCTAAAGGCCCCATTCTCTAGGTGTCACGTGCATGATTTCATTCTCCTCAACACAGACT 1057518898 360924 NM_001080463.1(DYNC2H1):c.10482+1G>A DYNC2H1 Jul 02, 2015 Human Phenotype Ontology:HP:0006487,MedGen:C1855340;Human Phenotype Ontology:HP:0001511,MedGen:C1386048;Human Phenotype Ontology:HP:0000774,MedGen:C0426790 Bowing of the long bones;Intrauterine growth retardation;Narrow chest unknown 11 103256241 TCTTACAAACTCCAAATTTCCCTTGATCAAGTAATTATTTCCTTCTTTGTAATTTCGTATT 267606621 23505 NM_001605.2(AARS):c.986G>A (p.Arg329His) AARS Aug 18, 2015 MedGen:C0007959,Orphanet:ORPHA166,SNOMED CT:50548001;MedGen:CN043576;MedGen:C2750090,OMIM:613287,Orphanet:ORPHA228174 Charcot-Marie-Tooth disease;Charcot-Marie-Tooth disease, type 2;Charcot-Marie-Tooth disease, type 2N germline;paternal 16 70268356 CTTACAGATATGTGTTGAGACGGATTCTCCGCCGAGCTGTCCGATACGCCCATGAAAAGCT 80338735 33917 NM_000156.5(GAMT):c.327G>A (p.Lys109=) GAMT Mar 01, 2017 MedGen:C0574080,OMIM:612736,Orphanet:ORPHA382,SNOMED CT:124239003;MedGen:CN517202 Deficiency of guanidinoacetate methyltransferase;not provided germline 19 1399793 CCGGGACTGGGCCCCACGGCAGACACACAAGGTGCCCCTCTGCCCGCAGGCCCTCCAGGAC 863223306 31011 NM_000515.4(GH1):c.291+28G>A GH1 Jun 01, 1997 MedGen:C0271567,OMIM:173100,Orphanet:ORPHA231679,SNOMED CT:237687003 Autosomal dominant isolated somatotropin deficiency germline 17 63917989 TCCGTGAGTGGATGCCTTCTCCCCAGGCGGGGATGGGGGAGACCTGTAGTCAGAGCCCCCG 878855328 243900 NM_004958.3(MTOR):c.6981G>A (p.Met2327Ile) MTOR Apr 11, 2017 MedGen:C4225259,OMIM:616638,Orphanet:ORPHA457485 Smith-Kingsmore syndrome de novo;germline 1 11117039 AACCAATTATACCCGTTCTTTAGCGGTCATGTCAATGGTTGGGTATATTTTAGGCCTGGGA -1 442605 NM_024408.3(NOTCH2):c.6758G>A (p.Trp2253Ter) NOTCH2 Sep 12, 2017 MedGen:CN517202 not provided germline 1 119915964 GGCTCCATCCAGTCCCAGTCCCAGCAGATTGGATGAACCGCATGGAGGTGAATGAGACCCA 267607940 95994 NM_000251.2(MSH2):c.1076+1G>A MSH2 Jan 21, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0009405,Orphanet:ORPHA443090;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Hereditary nonpolyposis colon cancer;Lynch syndrome;not provided germline 2 47416430 TCTCATGGATAAGAACAGAATAGAGGAGAGGTATGTTATTAGTTTATACTTTCGTTAGTTT 104893947 17429 NM_000045.3(ARG1):c.365G>A (p.Trp122Ter) ARG1 Jun 18, 2015 MedGen:C0268548,OMIM:207800,Orphanet:ORPHA90,SNOMED CT:23501004;MedGen:CN517202 Arginase deficiency;not provided germline 6 131581278 CCAGGGTCCACCCTGATCTTGGAGTCATCTGGGTGGATGCTCACACTGATATCAACACTCC 762060470 361391 NM_000520.5(HEXA):c.459+5G>A HEXA Feb 28, 2017 MedGen:C0039373,OMIM:272800,Orphanet:ORPHA845,SNOMED CT:111385000;MedGen:CN517202 Tay-Sachs disease;not provided germline;unknown 15 72353686 TTGTTTGGAAATCTGCTGAGGGCACAGTAAGTGTGGACCCTCAAAAAGGGCTCCTTTTTCA -1 485771 NM_000267.3(NF1):c.2511G>A (p.Trp837Ter) NF1 Dec 30, 2015 MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003 Neurofibromatosis, type 1 germline 17 31229126 TTTGTCTGACACAGACTCCCTACAGGAATGGATCAACATGACTGGCTTCCTTTGTGCCCTT 121908571 21202 NM_004328.4(BCS1L):c.830G>A (p.Ser277Asn) BCS1L Sep 01, 2001 MedGen:C1852372,OMIM:124000 Mitochondrial complex III deficiency germline 2 218662620 ACCACCTGCTGAGCGTGGCCCCGCAGCAGAGCCTGGTACTCCTGGAGGATGTGGATGCTGC 863224040 211117 NM_012208.3(HARS2):c.633+1G>A HARS2 May 16, 2014 MedGen:CN517202 not provided germline 5 140695846 GGATTGCAGTTGGGAGACTTTCTCATTAAGGTGAGGCCAGGGCTGAGAACTGTGGGAGAAG 137853166 25592 NM_000351.5(STS):c.1337G>A (p.Cys446Tyr) STS Aug 15, 1997 MedGen:C0079588,OMIM:308100,Orphanet:ORPHA281210,SNOMED CT:72523005 X-linked ichthyosis with steryl-sulfatase deficiency germline X 7334066 GCTCCGATCATGAGTTTCTCTTCCATTACTGCAACGCCTACTTAAATGCTGTGCGCTGGCA 942375725 410886 NM_000211.4(ITGB2):c.2013G>A (p.Trp671Ter) ITGB2 Aug 28, 2015 MedGen:CN517202 not provided germline 21 44888760 CTGCAAGGAGAGGGACTCAGAGGGCTGCTGGGTGGCCTACACGCTGGAGCAGCAGGACGGG 62514959 15618 NM_000277.2(PAH):c.977G>A (p.Trp326Ter) PAH Nov 01, 1989 MedGen:C0031485,OMIM:261600,Orphanet:ORPHA716,SNOMED CT:154735006;MedGen:CN517202 Phenylketonuria;not provided germline 12 102844424 CTCAGATTGACTTTCCATTCCAGATTTACTGGTTTACTGTGGAGTTTGGGCTCTGCAAACA 875989929 246306 NM_000527.4(LDLR):c.1735G>A (p.Asp579Asn) LDLR Jun 09, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11116888 GATCTCCTCAGTGGCCGCCTCTACTGGGTTGACTCCAAACTTCACTCCATCTCAAGCATCG 62508588 15630 NM_000277.2(PAH):c.728G>A (p.Arg243Gln) PAH May 04, 2017 MedGen:C0031485,OMIM:261600,Orphanet:ORPHA716,SNOMED CT:154735006;MedGen:CN517202 Phenylketonuria;not provided germline;unknown 12 102852929 TCATCCCAGCTTGCACTGGTTTCCGCCTCCGACCTGTGGCTGGCCTGCTTTCCTCTCGGGA 1057518798 360805 NM_000309.4(PPOX):c.1281G>A (p.Trp427Ter) PPOX Mar 22, 2016 Human Phenotype Ontology:HP:0011848,MedGen:C0232488;Human Phenotype Ontology:HP:0008066,MedGen:C0241054;Human Phenotype Ontology:HP:0010473,MedGen:C0151861 Abdominal colic;Abnormal blistering of the skin;Porphyrinuria unknown 1 161170939 CTGCATTCCCCAGTATACACTAGGTCACTGGCAAAAACTAGGTAAGTTGGGAAAACAGCTG 886041506 264246 NM_001135243.1(TCOF1):c.1278+1G>A TCOF1 Jan 21, 2016 MedGen:CN517202 not provided germline 5 150374812 TCGGACAGTGAGGAGGAGGCGCCTGCTCAGGTGAGGCAGAGGGGAGGGGTGGAGAGTAGCC 121912880 192903 NM_001844.4(COL2A1):c.1510G>A (p.Gly504Ser) COL2A1 Feb 04, 2015 Human Phenotype Ontology:HP:0002655,MedGen:C0038015,OMIM:183900,Orphanet:ORPHA253;Human Phenotype Ontology:HP:0002657,MedGen:C0700635,OMIM:184250,Orphanet:ORPHA93346;MedGen:C2020284,OMIM:108300 Spondyloepiphyseal dysplasia congenita;Spondylometaphyseal dysplasia;Stickler syndrome type 1 germline 12 47986353 CGTGGAGAGCCTGGTGGCGTTGGGCCCATCGGTCCCCCTGGAGAAAGAGTTAAGTGAATGT -1 443669 NM_001999.3(FBN2):c.4222+5G>A FBN2 Jul 12, 2017 MedGen:CN517202 not provided germline 5 128332907 GATTGGAAACGGCATCAAGTGTATTGGTGAGTTTGCAAATGTAAATATCCTTTGCTAAGGC -1 481708 NM_001003694.1(BRPF1):c.3G>A (p.Met1Ile) BRPF1 Nov 02, 2017 MedGen:CN517202 not provided germline 3 9734143 CTGATCTGTGTATTCTAGATGTGACAGCATGGGGGTGGACTTTGATGTGAAGACTTTCTGC 137852317 25410 NM_000402.4(G6PD):c.1429G>A (p.Gly477Arg) G6PD May 24, 2017 MedGen:C2720289,OMIM:300908,Orphanet:ORPHA466026;na Anemia, nonspherocytic hemolytic, due to G6PD deficiency;G6PD SANTIAGO DE CUBA germline X 154532411 TATGAGCGCCTCATCCTGGACGTCTTCTGCGGGAGCCAGATGCACTTCGTGCGCAGGTGAG 104894641 20148 NM_000199.3(SGSH):c.1298G>A (p.Arg433Gln) SGSH Dec 03, 2013 MedGen:C0086647,OMIM:252900,Orphanet:ORPHA79269,SNOMED CT:41572006 Mucopolysaccharidosis, MPS-III-A germline 17 80210663 GGTACAAGGACCTCCGTCATTACTACTACCGGGCGCGCTGGGAGCTCTACGACCGGAGCCG 140627 197683 NM_000138.4(FBN1):c.5015G>A (p.Cys1672Tyr) FBN1 Sep 02, 2014 MedGen:CN517202 not provided germline 15 48463949 CATGTTACAACACCGTTGGCAACTACACCTGTATCTGTCCTCCAGACTACATGCAAGTGAA 146015592 46845 NM_000060.4(BTD):c.470G>A (p.Arg157His) BTD May 25, 2016 MedGen:C0220754,OMIM:253260,Orphanet:ORPHA79241,SNOMED CT:8808004;MedGen:C0220754,OMIM:253260,Orphanet:ORPHA79241,SNOMED CT:8808004;MedGen:C0220754,OMIM:253260,Orphanet:ORPHA79241,SNOMED CT:8808004;MedGen:CN517202 Biotinidase deficiency;Biotinidase deficiency;Biotinidase deficiency;not provided germline;unknown 3 15644326 TACACCTTTTTTTCCTCTAGGTGCTCCAGCGCCTGAGTTGTATGGCCATCAGGGGAGATAT 797045177 205703 NM_001376.4(DYNC1H1):c.926G>A (p.Arg309His) DYNC1H1 Feb 09, 2016 MedGen:C3281202,OMIM:614563;MedGen:CN517202 Mental retardation, autosomal dominant 13;not provided de novo;germline 14 101980515 TGACTCTGGATATCTTGAAACATGGCAAGCGCTTCCATGCCACCGTCAGTTTTGACACTGA 121912632 20031 NM_021625.4(TRPV4):c.1847G>A (p.Arg616Gln) TRPV4 Apr 02, 2014 MedGen:C0432227,OMIM:113500,Orphanet:ORPHA93304,SNOMED CT:254087001;Human Phenotype Ontology:HP:0002652,MedGen:C0410528,SNOMED CT:105986008 Brachyrachia (short spine dysplasia);Skeletal dysplasia germline 12 109792407 GTCTTTAGATTCTCTTCAAGGACCTTTTCCGATTCCTGCTCGTCTACTTGCTCTTCATGAT 879254022 245172 NM_000169.2(GLA):c.707G>A (p.Trp236Ter) GLA Sep 24, 2015 MedGen:CN517202 not provided germline X 101398879 GGCGAAATTTTGCTGACATTGATGATTCCTGGAAAAGTATAAAGAGTATCTTGGACTGGAC 267607819 95093 NM_000249.3(MLH1):c.1039-1G>A MLH1 May 17, 2016 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:CN517202 Lynch syndrome;not provided germline 3 37025636 ATATTTTTTTTTTTTTTTTTTTTTAATACAGACTTTGCTACCAGGACTTGCTGGCCCCTCT 66612022 457703 NM_000089.3(COL1A2):c.982G>A (p.Gly328Ser) COL1A2 Oct 10, 2016 MedGen:C0268335,OMIM:130000,Orphanet:ORPHA287,SNOMED CT:20766005,SNOMED CT:83470009;MedGen:C0023931,OMIM:166200,SNOMED CT:385482004 Ehlers-Danlos syndrome, classic type;Osteogenesis imperfecta type I germline 7 94409768 GCTGGGGCTCCCGGCCTCCCTGGACCCCGCGGTATTCCTGGCCCTGTTGGTGCTGCCGGTG 74452732 31073 NM_000406.2(GNRHR):c.511G>A (p.Ala171Thr) GNRHR Apr 01, 2003 Human Phenotype Ontology:HP:0000044,MedGen:C0271623,OMIM:146110,Orphanet:ORPHA181387,SNOMED CT:33927004 Hypogonadotropic hypogonadism 7 with or without anosmia germline 4 67753825 GGCCTGGCCTGGATCCTCAGTAGTGTCTTTGCAGGACCACAGGTAAGCCATTATACACAAA 66500027 103189 NM_000531.5(OTC):c.717+1G>A OTC - MedGen:CN517202 not provided unknown X 38408796 ACCAAGTTGGCAGAGCAGTATGCCAAAGAGGTATGCTCTTTACATGTAAAGCTATTATTGC 886042641 267734 NM_001130987.1(DYSF):c.159G>A (p.Trp53Ter) DYSF Oct 06, 2015 MedGen:C1850889,OMIM:253601,Orphanet:ORPHA268 Limb-girdle muscular dystrophy, type 2B germline 2 71481890 TTTTCTCTTTTTCTTCCAGGGATTTGAATGGGACCTCAAGGGCATCCCCCTGGACCAGGGC 104894846 25802 NM_000169.2(GLA):c.888G>A (p.Met296Ile) GLA Aug 03, 1995 MedGen:C1970820 Fabry disease, cardiac variant germline X 101398481 CTGGGCTATCATGGCTGCTCCTTTATTCATGTCTAATGACCTCCGACACATCAGCCCTCAA 797045398 209299 NM_000052.6(ATP7A):c.4226+5G>A ATP7A Feb 08, 2013 MedGen:C0022716,OMIM:309400,Orphanet:ORPHA565,SNOMED CT:59178007 Menkes kinky-hair syndrome germline X 78045577 GTACTTTCTTCTCTCTTCCTTAAACTGTAAGTATGATAGCTTGCTCACATTTGTATTTTGT 137853265 25869 NM_004463.2(FGD1):c.1223G>A (p.Arg408Gln) FGD1 May 15, 2005 MedGen:C0175701,OMIM:305400,SNOMED CT:14921002 Aarskog syndrome germline X 54467901 TGTTCTGTGCCCGGCTGCTGGAAGAAGCTCGGAACCGCAGTTCCTTCCCGGCCGACGTTGT 121964960 27054 NM_000532.4(PCCB):c.502G>A (p.Glu168Lys) PCCB Feb 20, 2014 Human Phenotype Ontology:HP:0003353,MedGen:C0268579,OMIM:606054,Orphanet:ORPHA35 Propionic acidemia germline 3 136262024 CTGAATGACTCTGGGGGAGCACGGATCCAAGAAGGAGTGGAGTCTTTGGCTGGCTATGCAG 104894155 16843 NM_000102.3(CYP17A1):c.1247G>A (p.Arg416His) CYP17A1 Oct 01, 2006 MedGen:CN042980 Complete combined 17-alpha-hydroxylase/17,20-lyase deficiency germline 10 102830982 CTGGCTGATGCCACTCCTTGCCTGCAGAGCGTTTCTTGAATCCAGCGGGGACCCAGCTCAT 104894839 25775 NM_000169.2(GLA):c.861G>A (p.Trp287Ter) GLA Jul 01, 1993 Human Phenotype Ontology:HP:0001071,MedGen:C0002986,OMIM:301500,Orphanet:ORPHA324,SNOMED CT:16652001 Fabry disease germline X 101398508 GAATCAGCAAGTAACTCAGATGGCCCTCTGGGCTATCATGGCTGCTCCTTTATTCATGTCT 397514547 48210 NM_001101426.3(ISPD):c.466G>A (p.Asp156Asn) ISPD Jan 30, 2013 MedGen:C3553330,OMIM:614643 Congenital muscular dystrophy-dystroglycanopathy with brain and eye anomalies, type A7 germline 7 16406129 CTCTCTAAGCCAGAAGTAGTGATTATCCATGATGCTGTGAGACCATTTGTTGAGGAAGGTG 886041021 263149 NM_006087.3(TUBB4A):c.1172G>A (p.Arg391His) TUBB4A Jul 05, 2016 MedGen:C2676244,OMIM:612438,Orphanet:ORPHA139441 Leukodystrophy, hypomyelinating, 6 germline 19 6495327 TCTCCGAGCAGTTCACGGCCATGTTCCGGCGCAAGGCCTTCTTGCACTGGTACACGGGCGA 199476130 24659 m.5703G>A MT-TN Jan 01, 2003 MedGen:C4016605 Ophthalmoplegia, isolated germline MT 5703 TAAACCCACAAACACTTAGTTAACAGCTAAGCACCCTAATCAACTGGCTTCAATCTACTTC 398123353 98813 NM_000404.3(GLB1):c.397-1G>A GLB1 Nov 01, 2012 MedGen:C0268272,OMIM:230600,Orphanet:ORPHA79256,SNOMED CT:18756002;MedGen:C0268273,OMIM:230650,Orphanet:ORPHA79257;MedGen:C0268271,OMIM:230500,Orphanet:ORPHA79255,SNOMED CT:238026007;MedGen:C0086652,OMIM:253010,Orphanet:ORPHA309310,SNOMED CT:238044004 GM1 gangliosidosis type 2;Gangliosidosis GM1 type 3;Infantile GM1 gangliosidosis;Mucopolysaccharidosis, MPS-IV-B germline 3 33068291 ACATTATAATGGCTTGTTTTCCCTGAACTAGGGAGGATTACCTGCTTGGCTGCTAGAGAAA 397516013 51871 NM_000256.3(MYBPC3):c.3293G>A (p.Trp1098Ter) MYBPC3 Mar 26, 2017 Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005 Hypertrophic cardiomyopathy;Primary familial hypertrophic cardiomyopathy germline 11 47333231 CACCCCAGGATGTCGGCAACACGGAGCTCTGGGGGTACACAGTGCAGAAAGCCGACAAGAA 104886378 35925 NM_000495.4(COL4A5):c.3017-1G>A COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108625704 TGTCTTAATTTTACCAATTTGACCTTTCTAGGTCCCAAAGGTAACCCTGGTCTCCCTGGAC 201992075 260978 NM_001273.3(CHD4):c.4822G>A (p.Val1608Ile) CHD4 Jan 24, 2017 MedGen:C4310688,OMIM:617159 Sifrim-Hitz-Weiss syndrome germline 12 6581131 CCTGCCCCTGCCTCAGAGGATGAAAAGGTCGTTGTTGAACCCCCTGAGGGAGAGGAGAAAG 372946560 214746 NM_002528.6(NTHL1):c.709+1G>A NTHL1 Nov 12, 2015 MedGen:C4225157,OMIM:616415,Orphanet:ORPHA454840 Familial adenomatous polyposis 3 unknown 16 2043566 CTGTGGCCTGGGGCACTGTGTCAGGCATTGGTGAGTAGAGGAGGGCGGGGCTGGCTCCAGC 398122523 94574 NM_006420.2(ARFGEF2):c.1958+1G>A ARFGEF2 Nov 01, 2013 MedGen:C1842563,OMIM:608097 Heterotopia, periventricular, autosomal recessive germline 20 48976200 AAAAGAAATCATTGAACACGGCATCGAGCTGTGAGTGGGGCTGCCGTTAACTAGCAGGGAT 121913639 29145 NM_000257.3(MYH7):c.2803G>A (p.Glu935Lys) MYH7 Apr 15, 1994 MedGen:C3495498,OMIM:192600 Familial hypertrophic cardiomyopathy 1 germline 14 23424026 AGGCTGGAGGATGAGGAGGAGATGAATGCTGAGCTCACTGCCAAGAAGCGCAAGCTGGAAG 104894598 39752 NM_000263.3(NAGLU):c.1694G>A (p.Arg565Gln) NAGLU Sep 28, 2016 MedGen:C0086648,OMIM:252920,Orphanet:ORPHA79270,SNOMED CT:59990008;MedGen:C0026706,SNOMED CT:88393000;MedGen:CN517202 Mucopolysaccharidosis, MPS-III-B;Sanfilippo syndrome;not provided germline 17 42543700 CCTTCCGCTACGACCTGCTGGACCTCACTCGGCAGGCAGTGCAGGAGCTGGTCAGCTTGTA 267607995 96343 NM_000251.2(MSH2):c.2047G>A (p.Gly683Arg) MSH2 Jul 10, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0009405,Orphanet:ORPHA443090;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:CN169374 Hereditary cancer-predisposing syndrome;Hereditary nonpolyposis colon cancer;Lynch syndrome;not specified germline;unknown 2 47476408 GGAGGTAAATCAACATATATTCGACAAACTGGGGTGATAGTACTCATGGCCCAAATTGGGT 587784160 481735 NM_022455.4(NSD1):c.5862G>A (p.Trp1954Ter) NSD1 Dec 04, 2017 MedGen:CN517202 not provided germline 5 177280804 TGAAATTTTCCGCACATTACAGCGGGGTTGGGGTCTACGGACAAAAACAGATATTAAAAAG 118204100 16492 NM_000190.3(HMBS):c.593G>A (p.Trp198Ter) HMBS Dec 01, 1991 MedGen:C0162565,OMIM:176000,Orphanet:ORPHA79276,SNOMED CT:234422006 Acute intermittent porphyria germline 11 119091507 TGGCAACAGCTGGCCTGCAGCGCATGGGCTGGCACAACCGGGTGGGGCAGGTAGGGCCTGC 193922609 224915 NM_000551.3(VHL):c.320G>A (p.Arg107His) VHL Feb 26, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0019562,OMIM:193300,Orphanet:ORPHA892,SNOMED CT:46659004 Hereditary cancer-predisposing syndrome;Von Hippel-Lindau syndrome germline 3 10142167 CCTACCCAACGCTGCCGCCTGGCACGGGCCGCCGCATCCACAGCTACCGAGGTACGGGCCC 397515508 76427 m.3700G>A MT-ND1 Mar 21, 2016 Human Phenotype Ontology:HP:0000512,MedGen:C1849688;Human Phenotype Ontology:HP:0001112,MedGen:C0917796,OMIM:535000,Orphanet:ORPHA104,SNOMED CT:58610003;Human Phenotype Ontology:HP:0001138,MedGen:C3887709;Human Phenotype Ontology:HP:0000572,MedGen:C3665386 Abnormal electroretinogram;Leber's optic atrophy;Optic neuropathy;Visual loss unknown MT 3700 GCATCAAACTCAAACTACGCCCTGATCGGCGCACTGCGAGCAGTAGCCCAAACAATCTCAT 121908946 21783 NM_006892.3(DNMT3B):c.2519G>A (p.Arg840Gln) DNMT3B Sep 15, 2002 MedGen:C0398788,OMIM:242860,SNOMED CT:234633000 Centromeric instability of chromosomes 1,9 and 16 and immunodeficiency germline 20 32807860 TGGGAAGGTCCTGGAGCGTGCCTGTCATCCGACACCTCTTCGCCCCTCTGAAGGACTACTT 397515432 48563 NM_018972.2(GDAP1):c.980G>A (p.Gly327Asp) GDAP1 Feb 19, 2013 MedGen:C1842197,OMIM:608340,Orphanet:ORPHA217055 Charcot-Marie-Tooth disease, recessive intermediate A germline 8 74364270 CAAAAGTTCTTGGCACGACCCTTGTGGTTGGTTTGCTTGCAGGAGTGGGATATTTTGCTTT 876657692 230991 NM_133261.2(GIPC3):c.411+1G>A GIPC3 Aug 11, 2015 MedGen:CN043648,Orphanet:ORPHA87884 Nonsyndromic hearing loss and deafness germline 19 3586681 GACAACGGGGCTGGCTACGCCTTCATCAAGGTGCCCGGGAGGGGGTGGGCGGGTGGCTTCC 28934582 27294 NM_003361.3(UMOD):c.443G>A (p.Cys148Tyr) UMOD Dec 01, 2002 MedGen:C0268113,OMIM:162000,Orphanet:ORPHA209886,SNOMED CT:46785007 Familial juvenile gout germline 16 20348858 CCGCGGGCTACCGGGGGGATGGATGGCACTGTGAGTGCTCCCCGGGCTCCTGCGGGCCGGG 104894972 24794 NM_003140.2(SRY):c.284G>A (p.Gly95Glu) SRY Jun 01, 2000 MedGen:C2748896,OMIM:400044 46,XY sex reversal, type 1 germline Y 2787320 TGCGAAACTCAGAGATCAGCAAGCAGCTGGGATACCAGTGGAAAATGCTTACTGAAGCCGA 72645321 414022 NM_000088.3(COL1A1):c.769G>A (p.Gly257Arg) COL1A1 Aug 16, 2017 MedGen:C0023931,OMIM:166200,SNOMED CT:385482004;MedGen:CN517202 Osteogenesis imperfecta type I;not provided germline;unknown 17 50197045 ATCTCTCTCCAGGGTGCTCGAGGATTGCCCGGAACAGCTGGCCTCCCTGGAATGAAGGGAC 1131692063 424207 NC_012920.1:m.13051G>A MT-ND5 May 22, 2017 MedGen:C0751651,Orphanet:ORPHA68380 Mitochondrial diseases germline MT 13051 CTCCACCCCTGACTCCCCTCAGCCATAGAAGGCCCCACCCCAGTCTCAGCCCTACTCCACT 118204110 16506 NM_000190.3(HMBS):c.667G>A (p.Glu223Lys) HMBS Jan 01, 1994 MedGen:C0162565,OMIM:176000,Orphanet:ORPHA79276,SNOMED CT:234422006 Acute intermittent porphyria germline 11 119092419 ATGTTTTTCCATCAGGGGGCCTTGGGCGTGGAAGTGCGAGCCAAGGACCAGGACATCTTGG 137852799 33416 NM_001039523.2(CHRNA1):c.601G>A (p.Val201Met) CHRNA1 May 01, 1997 MedGen:C0751885,OMIM:601462 Myasthenic syndrome, slow-channel congenital germline 2 174754233 CTGGGCACCTGGACCTACGACGGCTCTGTCGTGGCCATCAACCCGGTAGGTGGTGGCCACA 28936407 23174 NM_138712.3(PPARG):c.863G>A (p.Arg288His) PPARG Jun 01, 1999 MedGen:C0699790,OMIM:114500,SNOMED CT:269533000 Carcinoma of colon somatic 3 12416831 CCATCCGCATCTTTCAGGGCTGCCAGTTTCGCTCCGTGGAGGCTGTGCAGGAGATCACAGA 370384522 227439 NM_031942.4(CDCA7):c.1058G>A (p.Arg353His) CDCA7 Jun 10, 2011 MedGen:C4310799,OMIM:616910 Immunodeficiency-centromeric instability-facial anomalies syndrome 3 germline 2 173366305 ATTTGTAGGGCTCTACTTGTCATCAATGCCGTCAGAAGACTATTGATACCAAAACAAACTG 58645163 409921 NM_000526.4(KRT14):c.1163G>A (p.Arg388His) KRT14 Sep 06, 2015 MedGen:CN517202 not provided germline 17 41583346 GCAGCGTGGAGGAGCAGCTGGCCCAGCTCCGCTGCGAGATGGAGCAGCAGAACCAGGAGTA -1 488065 NM_000487.5(ARSA):c.960G>A (p.Trp320Ter) ARSA Mar 09, 2017 MedGen:C0023522,OMIM:250100,Orphanet:ORPHA512,SNOMED CT:396338004 Metachromatic leukodystrophy germline 22 50626173 CGGTGTCCGAGAGCCTGCCTTGGCCTTCTGGCCAGGTCATATCGCTCCCGGTCAGTCCGCA 797044774 195560 NM_000169.2(GLA):c.1072G>A (p.Glu358Lys) GLA Aug 12, 2014 Human Phenotype Ontology:HP:0001071,MedGen:C0002986,OMIM:301500,Orphanet:ORPHA324,SNOMED CT:16652001 Fabry disease germline X 101398027 GCCTGGGCTGTAGCTATGATAAACCGGCAGGAGATTGGTGGACCTCGCTCTTATACCATCG -1 481390 NM_021629.3(GNB4):c.229G>A (p.Gly77Arg) GNB4 Dec 13, 2017 MedGen:C3554654,OMIM:615185,Orphanet:ORPHA352670 Charcot-Marie-Tooth disease, dominant intermediate F de novo 3 179416531 TCTAGGCTGCTAGTCAGTGCTTCTCAAGATGGAAAATTAATTATTTGGGATAGCTATACAA 120074130 18001 NM_000271.4(NPC1):c.2665G>A (p.Val889Met) NPC1 Jul 01, 1999 MedGen:CN068592 Niemann-Pick disease, type C1, adult form germline 18 23539941 ATCAGTCAGTACCTGCATGCGGGTCCGCCTGTGTACTTTGTCCTGGAGGAAGGGCACGACT 104886488 65621 NM_001142459.1(ASB10):c.215G>A (p.Arg72His) ASB10 Mar 15, 2012 MedGen:C1863926,OMIM:603383 Glaucoma 1, open angle, F germline 7 151186916 TGCTGGCTGGGGACGTGGGCTGTGTCTCCCGCATCCTCGCGGACTCCAGTACTGGCCTGGC 869312731 225893 NM_017671.4(FERMT1):c.1848G>A (p.Trp616Ter) FERMT1 Jan 07, 2016 MedGen:C0406557,OMIM:173650,SNOMED CT:238835001,SNOMED CT:238836000 Kindler's syndrome germline 20 6079448 CACAAATATCAAACAGTGGAATGTAAACTGGGAAACCCGGCAGGTAAAGTGAAAGTTTTTG 267606796 31463 NM_000138.4(FBN1):c.8268G>A (p.Trp2756Ter) FBN1 Jul 01, 1992 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006 Marfan syndrome germline 15 48411338 GACAGAAGCCAATGTGAGTCTTGCAAGTTGGGATGTTGAGAAGACAGCCATCTTTGCTTTC 730880870 179653 NM_000257.3(MYH7):c.1325G>A (p.Arg442His) MYH7 Oct 18, 2013 MedGen:CN517202 not provided germline 14 23429037 ATGAGAGGATGTTCAACTGGATGGTGACGCGCATCAATGCCACCCTGGAGACCAAGCAGCC 765249238 227251 NM_005630.2(SLCO2A1):c.940+1G>A SLCO2A1 Mar 18, 2016 MedGen:C3280800,OMIM:614441 Primary hypertrophic osteoarthropathy, autosomal recessive 2 germline 3 133948892 CAAGAGGCTCCCTGGTGGATTTCATTAAACGTAACTGACCCTACAGCCCTGGGTGGGCTGG 398123391 98902 NM_000426.3(LAMA2):c.9212-1G>A LAMA2 Nov 01, 2012 MedGen:C1263858,OMIM:607855,Orphanet:ORPHA258,SNOMED CT:111503008 Merosin deficient congenital muscular dystrophy germline 6 129516189 AAGCTGAGCCCTCTTGCATTGCCTTTTTCAGATGACCTCAAGCAGTTTGGCCTAACAACCA 267606973 25740 NM_203473.2(PORCN):c.178G>A (p.Gly60Arg) PORCN Jul 01, 2007 MedGen:C0016395,OMIM:305600,Orphanet:ORPHA2092 Focal dermal hypoplasia germline X 48511336 TACCTGAAGCATGCAAGCACCGTGGCAGGCGGGTTCTTCAGCCTCTACCACTTCTTCCAGC 9332971 24862 NM_000044.4(AR):c.2567G>A (p.Arg856His) AR Dec 16, 2016 MedGen:C0039585,OMIM:300068,SNOMED CT:12313004;MedGen:C0039585,OMIM:300068,SNOMED CT:12313004;MedGen:C1839259,OMIM:313200,Orphanet:ORPHA481;MedGen:C0268301,OMIM:312300,Orphanet:ORPHA90797,SNOMED CT:58672003 Androgen resistance syndrome;Androgen resistance syndrome;Bulbo-spinal atrophy X-linked;Partial androgen insensitivity syndrome germline X 67722944 AAAGAAAAAATCCCACATCCTGCTCAAGACGCTTCTACCAGCTCACCAAGCTCCTGGACTC -1 481158 NM_024887.3(DHDDS):c.632G>A (p.Arg211Gln) DHDDS Jan 24, 2018 MedGen:CN769090,OMIM:617836 DEVELOPMENTAL DELAY AND SEIZURES WITH OR WITHOUT MOVEMENT ABNORMALITIES germline 1 26457880 ACATCTTGATACGGACTTCTGGAGAAGTGCGGCTGAGTGACTTCTTGCTATGGCAGGTAGG 869312868 226651 NM_000834.3(GRIN2B):c.2065G>A (p.Gly689Ser) GRIN2B Oct 31, 2017 MedGen:C3151411,OMIM:613970;MedGen:CN517202 Mental retardation, autosomal dominant 6;not provided de novo;germline 12 13571910 CCCCCTTTCCGCTTTGGGACCGTGCCCAACGGCAGCACAGAGAGAAATATTCGCAATAACT 121918147 15702 NM_000312.3(PROC):c.1027G>A (p.Gly343Ser) PROC Mar 21, 1992 MedGen:C2676759,OMIM:612304 Thrombophilia, hereditary, due to protein C deficiency, autosomal recessive germline 2 127428587 GCCGGCCAGGAGACCCTCGTGACGGGCTGGGGCTACCACAGCAGCCGAGAGAAGGAGGCCA 369915689 106811 NM_006077.3(MICU1):c.741+1G>A MICU1 Feb 01, 2014 MedGen:C3810285,OMIM:615673,Orphanet:ORPHA401768 Myopathy with extrapyramidal signs germline 10 72477173 GGAGAAGTAGATATGGAAGAATTTGAACAGGCAAGTTGTCCTGGAGAGTTCCTCTAAATAC 281874690 35846 NM_000495.4(COL4A5):c.2305G>A (p.Gly769Arg) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108606802 CCTGGGCCACCAGGACTTCCAGGTTTCAAAGGAGCACTTGGTCCAAAAGGTGATCGTGGTT 786200868 16419 NM_153704.5(TMEM67):c.312+5G>A TMEM67 Feb 01, 2009 MedGen:C1857662,OMIM:216360,Orphanet:ORPHA1454 COACH syndrome germline 8 93755871 TTTGTAAAAAGTGCCCAGAAAACATGGTGCGCATAATTTATTTTAAAATAACTTACCTGTA 132630277 26144 NM_000116.4(TAZ):c.589G>A (p.Gly197Arg) TAZ Oct 01, 2010 MedGen:C0574083,OMIM:302060,Orphanet:ORPHA111,SNOMED CT:297231002 3-Methylglutaconic aciduria type 2 germline X 154420037 ACATTTCTACCTCCCCCCTGGGCAGGAATCGGGCGCCTGATTGCTGAGTGTCATCTCAACC 794727397 193020 NM_000495.4(COL4A5):c.1844G>A (p.Gly615Glu) COL4A5 Nov 21, 2014 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive germline X 108598766 CTGGGAACCCAGGTTTACCAGGCCTCCCAGGGAATATAGGGCCTATGGGTCCCCCTGGTTT 113994054 20985 NM_003907.2(EIF2B5):c.584G>A (p.Arg195His) EIF2B5 Oct 01, 2002 MedGen:C1858991,OMIM:603896,Orphanet:ORPHA99854 Leukoencephalopathy with vanishing white matter germline 3 184137975 TCAAGGAGTCATCCCCCAGCCACCCAACTCGTTGCCACGAAGACAATGTGGTAGTGGCTGT 118204056 16558 NM_000237.2(LPL):c.607G>A (p.Ala203Thr) LPL May 01, 1990 MedGen:C0023817,OMIM:238600,Orphanet:ORPHA309015,SNOMED CT:238086005,SNOMED CT:275598004 Hyperlipoproteinemia, type I germline 8 19954185 GAAGCCCCGAGTCGTCTTTCTCCTGATGATGCAGATTTTGTAGACGTCTTACACACATTCA 119468006 18678 NM_020247.4(COQ8A):c.815G>A (p.Gly272Asp) COQ8A Jun 07, 2016 MedGen:C2677589,OMIM:612016,Orphanet:ORPHA139485 Coenzyme Q10 deficiency, primary, 4 germline 1 226982111 GGATCGTGCGCACGCTCTGCAAGGTGCGTGGTGCGGCACTCAAGCTGGGCCAGATGCTGAG 104894254 24199 NM_153767.3(KCNJ1):c.443G>A (p.Gly148Glu) KCNJ1 Jan 01, 1997 MedGen:C1855849,OMIM:241200 Bartter syndrome, type 2, antenatal germline 11 128839801 TTTTTCTGCTTATCTTTCAGTCTATACTTGGAGTTATAATCAATTCTTTCATGTGTGGGGC 121913156 29747 NM_000208.3(INSR):c.3602G>A (p.Arg1201Gln) INSR Jun 01, 2004 MedGen:C1864952,OMIM:609968,Orphanet:ORPHA263458;MedGen:C0271690,OMIM:610549,SNOMED CT:9859006 Hyperinsulinemic hypoglycemia familial 5;Insulin-resistant diabetes mellitus AND acanthosis nigricans germline 19 7120677 GGAAAGGGGGCAAGGGTCTGCTCCCTGTACGGTGGATGGCACCGGAGTCCCTGAAGGATGG 121912844 32489 NM_000094.3(COL7A1):c.6100G>A (p.Gly2034Arg) COL7A1 Nov 24, 2016 MedGen:C0432322,OMIM:131750,Orphanet:ORPHA231568;MedGen:CN517202 Generalized dominant dystrophic epidermolysis bullosa;not provided germline 3 48575419 AGGGGCCCCCCCGGGCCTTCCGGCCTTGCCGGGGAGCCTGGAAAGCCTGGTATTCCCGGGC 267607854 95333 NM_000249.3(MLH1):c.1732-1G>A MLH1 Sep 05, 2013 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Lynch syndrome germline 3 37047518 CTTGCTCCTTCATGTTCTTGCTTCTTCCTAGGAGCCAGCACCGCTCTTTGACCTTGCCATG 267607268 46922 NM_002437.4(MPV17):c.70+5G>A MPV17 May 17, 2012 MedGen:C1850406,OMIM:256810,Orphanet:ORPHA255229 Navajo neurohepatopathy not provided 2 27322443 GTGGAAAGTACAGGTCCTGACAGCTGGTGAGTGTCCCTCTAGGACTTGAGTGGGACCAGGG 779760634 195726 NM_015404.3(WHRN):c.1417-1G>A WHRN Aug 19, 2014 MedGen:C1846839,OMIM:607084 Deafness, autosomal recessive 31 germline 9 114423524 TGCTGAGTGCCCCTTTTGTCCCCGCCTCCAGTTCTCACTCCTCTCTGAGGTGAGAGGCACC 557172581 414327 NM_001204.6(BMPR2):c.1687G>A (p.Val563Met) BMPR2 - MedGen:C0152171,OMIM:178600,SNOMED CT:26174007 Primary pulmonary hypertension germline 2 202555352 GAAGACTCTATCCATCATACTGACAGCATCGTGAAGAATATTTCCTCTGAGCATTCTATGT -1 443480 NM_000094.3(COL7A1):c.4011+1G>A COL7A1 Jan 07, 2016 MedGen:CN517202 not provided germline 3 48584909 CCAGGGTTGCCTGGCCCTCGTGGGGACCCGGTAAGGTGCCTTCCCTTCTTTGCTCTCTAAG 587779693 107200 NM_000090.3(COL3A1):c.1556G>A (p.Gly519Glu) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188995738 GTGGTGCTCCAGGCCCTGCAGGGCCCAGAGGAGCTGCTGGAGAACCTGGCAGAGATGGCGT 121964992 27010 NM_000108.4(DLD):c.1123G>A (p.Glu375Lys) DLD Mar 30, 2017 MedGen:CN043137,OMIM:246900;MedGen:CN517202 Maple syrup urine disease, type 3;not provided germline;unknown 7 107917349 AAAGCAGAGGATGAAGGCATTATCTGTGTTGAAGGAATGGCTGGTGGTGCTGTGCACATTG 80356524 19279 NM_025136.3(OPA3):c.277G>A (p.Gly93Ser) OPA3 Mar 31, 2009 MedGen:C1833809,OMIM:165300,Orphanet:ORPHA67036 Optic atrophy and cataract, autosomal dominant germline 19 45553777 CTGCTGGGCGAAGCCACCATCTTCATCGTGGGCGGCGGCTGCCTAGTGCTGGAGTACTGGC 863223406 210236 NM_000020.2(ACVRL1):c.1377+1G>A ACVRL1 Apr 22, 2015 MedGen:CN517202 not provided germline 12 51919116 ACCATCCCTAACCGGCTGGCTGCAGACCCGGTGAGGCCTCTGCTGGGACTAGGATGGCGTG 1064793908 406321 NM_000094.3(COL7A1):c.6900+1G>A COL7A1 Aug 16, 2015 MedGen:CN517202 not provided germline 3 48572670 GAACCTGGCCCCACGGGGGCCCCTGGACAGGTGATCTTTGACCCTGACTTCCACCCCCTGC 886043635 271675 NM_004006.2(DMD):c.3747G>A (p.Trp1249Ter) DMD Apr 19, 2016 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Duchenne muscular dystrophy germline X 32448495 ACTTGAAACTCTAACCACCAACTACCAGTGGCTCTGCACTAGGCTGAATGGGAAATGCAAG 1064794027 411460 NM_000206.2(IL2RG):c.545G>A (p.Cys182Tyr) IL2RG Aug 07, 2015 MedGen:CN517202 not provided germline X 71110205 TGAACTGGAACAACAGATTCTTGAACCACTGTTTGGAGCACTTGGTGCAGTACCGGACTGA 886039245 259331 NM_001242896.1(DEPDC5):c.193+1G>A DEPDC5 Apr 13, 2016 Gene:50987,MedGen:C1858477,OMIM:604364 Epilepsy, familial focal, with variable foci 1 germline 22 31760703 TCAAGTCTCTTAAGGAAGATTTACAGAAGGGTAAGAATTATATCACTCTTCTTAGAATTTT 863225137 214249 NM_001134831.1(AHI1):c.1626+1G>A AHI1 Feb 23, 2015 MedGen:C1837713,OMIM:608629 Joubert syndrome 3 unknown 6 135448289 ACTGTAAGAGGACTGAAAGTTCCAGACTGTGTAAGTTAATAGTACATATTAAGTGTATATC 1064793293 411388 NM_000377.2(WAS):c.1453G>A (p.Asp485Asn) WAS Feb 21, 2017 MedGen:CN517202 not provided germline X 48689434 CAGAAGAGAAGCAGAGCCATCCACTCCTCCGGTGAGCTGATCCTGCCGGGGCCTCAAACCT 387906745 39009 NM_000459.4(TEK):c.2744G>A (p.Arg915His) TEK Apr 01, 2010 MedGen:C1838437,OMIM:600195,Orphanet:ORPHA2451 Multiple Cutaneous and Mucosal Venous Malformations germline 9 27212764 CGCCCCATGGAAACCTTCTGGACTTCCTTCGCAAGAGCCGTGTGCTGGAGACGGACCCAGC 1060502876 392945 NM_000179.2(MSH6):c.2735G>A (p.Trp912Ter) MSH6 Oct 31, 2016 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Lynch syndrome germline 2 47800718 TTCCTGATTTGACTGTAGAATTGAACCGATGGGATACAGCCTTTGACCATGAAAAGGCTCG 1135402820 425101 NM_001042492.2(NF1):c.1683G>A (p.Trp561Ter) NF1 Feb 02, 2017 MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003 Neurofibromatosis, type 1 germline 17 31221891 TCTTCATCAGTTAGATAGCATTGATTTGTGGAATCCTGATGCTCCTGTAGAAACATTTTGG 80358189 69880 NM_007294.3(BRCA1):c.4485-1G>A BRCA1 Jan 06, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline;unknown 17 43074522 GATGGTTTTCTCCTTCCATTTATCTTTCTAGGTCATCCCCTTCTAAATGCCCATCATTAGA 587776903 40066 NM_201269.2(ZNF644):c.*592G>A ZNF644 Jun 01, 2011 MedGen:C3279997,OMIM:614167 Myopia 21, autosomal dominant germline 1 90916206 ATGGAACGGTTTTTTTTATACTAAAAAGTGGAGGGAGATTTGTTTAAACAAGTATTTCTAA 587783317 167802 NM_000053.3(ATP7B):c.4021G>A (p.Gly1341Ser) ATP7B Jul 29, 2013 MedGen:C0019202,OMIM:277900,Orphanet:ORPHA905,SNOMED CT:88518009 Wilson disease germline 13 51937276 TATAACCTGGTTGGGATACCCATTGCAGCAGGTAGGCAGCTCTTACCCACTGTGCTCCAGC 1060503248 399783 NM_000020.2(ACVRL1):c.1121G>A (p.Arg374Gln) ACVRL1 Oct 06, 2016 MedGen:C1838163,OMIM:600376;MedGen:C1832529;MedGen:CN169374 Hereditary hemorrhagic telangiectasia type 2;Pulmonary arterial hypertension related to hereditary hemorrhagic telangiectasia;not specified germline 12 51916108 TCGGCAACAACCCGAGAGTGGGCACCAAGCGGTACATGGCACCCGAGGTGCTGGACGAGCA 104894008 31174 NM_033507.1(GCK):c.784G>A (p.Gly262Arg) GCK Sep 14, 2017 MedGen:C1841962,OMIM:125851;MedGen:CN517202 Maturity-onset diabetes of the young, type 2;not provided germline 7 44147732 ATGTGCGTCAATACCGAGTGGGGCGCCTTCGGGGACTCCGGCGAGCTGGACGAGTTCCTGC 876660996 231935 NM_000243.2(MEFV):c.1759+1G>A MEFV Jul 03, 2014 MedGen:CN517202 not provided germline 16 3244253 CCCTGCGTTCAGAAATGGAAATGTTCAATGGTGAGTCCAGCGGTAATGGTGTGTGCTGGCC 761573352 200308 NM_174917.4(ACSF3):c.589G>A (p.Ala197Thr) ACSF3 Feb 28, 2014 MedGen:CN517202 not provided germline 16 89101270 GTCCCAGAGCAGGGATGGAGGAACAAGGGCGCCATGATCATCTACACCAGTGGGACCACGG 267607040 16074 NM_015559.2(SETBP1):c.2608G>A (p.Gly870Ser) SETBP1 Mar 10, 2016 Human Phenotype Ontology:HP:0005506,MeSH:D015464,MedGen:C0023473,OMIM:608232,Orphanet:ORPHA521;MedGen:C1849294,OMIM:269150,SNOMED CT:18899000 Chronic myeloid leukemia;Schinzel-Giedion syndrome germline;somatic 18 44951948 CACAGTGAGGAGACGATCCCCAGCGACAGCGGCATTGGGACAGACAACAACAGCACTTCTG 121908737 17002 NM_000022.3(ADA):c.446G>A (p.Arg149Gln) ADA Aug 01, 1990 MedGen:C1863239;MedGen:C1863236,OMIM:102700,Orphanet:ORPHA277 Partial adenosine deaminase deficiency;Severe combined immunodeficiency due to ADA deficiency germline;unknown 20 44625601 AGGGGGAGCGAGACTTCGGGGTCAAGGCCCGGTCCATCCTGTGCTGCATGCGCCACCAGCC 121917707 28874 NM_005270.4(GLI2):c.1323G>A (p.Trp441Ter) GLI2 Nov 01, 2010 MedGen:C1835819,OMIM:610829 Holoprosencephaly 9 germline 2 120975064 GGTGGTCATCTATGAGACCAACTGCCACTGGGAAGACTGCACCAAGGAGTACGACACCCAG 80338802 32652 NM_000070.2(CAPN3):c.2306G>A (p.Arg769Gln) CAPN3 Jul 29, 2016 MedGen:C1869123,OMIM:253600,Orphanet:ORPHA267 Limb-girdle muscular dystrophy, type 2A germline 15 42410926 ACAACCAGCTCTATGACATCATTACCATGCGGTACGCAGACAAACACATGAACATCGACTT 587776988 70462 NM_001142864.3(PIEZO1):c.7367G>A (p.Arg2456His) PIEZO1 May 09, 2013 Gene:10774,MedGen:C0272051,OMIM:194380,Orphanet:ORPHA3202,SNOMED CT:87994004 Xerocytosis germline 16 88715804 CCATCGTGCTGGTCATCGGCAAGTTCGTGCGCGGATTCTTCAGCGAGATCTCGCACTCCAT 797045148 205565 NM_080860.3(RSPH1):c.366G>A (p.Arg122=) RSPH1 Sep 03, 2015 MedGen:C0022521,OMIM:244400,Orphanet:ORPHA98861,SNOMED CT:42402006 Kartagener syndrome germline 21 42485804 GAAATACCATGTTCCCCTTGTCTTAACCAGGCATGGGCAAGGCACCTATTTATACGCGGAG 34813378 434367 NM_000491.4(C1QB):c.730G>A (p.Gly244Arg) C1QB Sep 28, 2017 MedGen:C3150902,OMIM:613652 C1q deficiency germline 1 22661354 GGCATGGAGGGTGCCAACAGCATCTTTTCCGGGTTCCTGCTCTTTCCAGATATGGAGGCCT 137853306 27503 NM_003289.3(TPM2):c.121G>A (p.Glu41Lys) TPM2 Sep 01, 2007 MedGen:C1836447,OMIM:609285;MedGen:CN517202 Nemaline myopathy 4;not provided germline 9 35689265 CTGACCAAGTCCCCTCTGTCCCAGCTGGAGGAGGAGCAGCAGGCCCTCCAGAAGAAGCTGA 111033551 32515 NM_000493.3(COL10A1):c.53G>A (p.Gly18Glu) COL10A1 Jan 01, 1997 MedGen:C0265289,OMIM:156500,Orphanet:ORPHA174,SNOMED CT:29248006 Metaphyseal chondrodysplasia, Schmid type germline 6 116125440 TGCTGCTAGTATCCTTGAACTTGGTTCATGGAGTGTTTTACGCTGAACGATACCAAATGCC -1 48774 NM_002335.3(LRP5):c.1584+1G>A LRP5 Jan 01, 2010 MedGen:C0432252,OMIM:259770,Orphanet:ORPHA2788,SNOMED CT:254112001 Osteoporosis with pseudoglioma germline 11 68390053 TGGGGAGACGCCAAGACAGACAAGATCGAGGTGAGGCTCCTGTGGACATGTTTGATCCAGG 397515342 17815 NM_000158.3(GBE1):c.783-1G>A GBE1 Feb 15, 1996 MedGen:C1856304,Orphanet:ORPHA308670 Glycogen storage disease IV, congenital neuromuscular germline 3 81642991 ATCTTCTTTTTGCTGTGTTCTTCATTGTTAGCCGTTATGGAACACCTGAAGAGCTACAAGA 104893795 28095 NM_000539.3(RHO):c.1033G>A (p.Val345Met) RHO Aug 01, 2001 MedGen:C3151001,OMIM:613731 Retinitis pigmentosa 4 germline 3 129533704 GCTACCGTGTCCAAGACGGAGACGAGCCAGGTGGCCCCGGCCTAAGACCTGCCTAGGACTC 58075601 77336 NM_002055.4(GFAP):c.1117G>A (p.Glu373Lys) GFAP Apr 24, 2015 MedGen:C0270726,OMIM:203450,Orphanet:ORPHA58,SNOMED CT:81854007;MedGen:CN517202 Alexander's disease;not provided germline 17 44911246 ATCGCCACCTACAGGAAGCTGCTAGAGGGCGAGGAGAACCGGTGAGCCCTCATCACAGCCC 575001023 260670 NM_000050.4(ASS1):c.257G>A (p.Arg86His) ASS1 Sep 01, 2016 MedGen:C0175683,OMIM:215700,Orphanet:ORPHA187 Citrullinemia type I germline 9 130458483 CCATCCAGTCCAGCGCACTGTATGAGGACCGCTACCTCCTGGGCACCTCTCTTGCCAGGCC 121908017 18798 NM_000375.2(UROS):c.562G>A (p.Gly188Arg) UROS Dec 01, 1998 MedGen:C0162530,OMIM:263700,Orphanet:ORPHA79277 Congenital erythropoietic porphyria germline 10 125794978 AGGACTGATCTTGTTTTCTGTTCCCCACAGGGGGTTCCAGCCAGCATCACATTTTTTAGTC 587777714 165819 NM_014845.5(FIG4):c.904G>A (p.Glu302Lys) FIG4 Jul 01, 2011 MedGen:C1970011,OMIM:611228,Orphanet:ORPHA139515 Charcot-Marie-Tooth disease, type 4J germline 6 109743137 CAGGGTGATGTTGCAAATGAAGTGGAGACTGAACAAATACTCTGCGATGCTTCTGTGATGT 1064792874 224780 NM_001257989.1(TYMP):c.1297G>A (p.Gly433Ser) TYMP Jan 14, 2016 MedGen:C0872218,OMIM:603041,Orphanet:ORPHA298 Mitochondrial DNA depletion syndrome 1 (MNGIE type) germline 22 50526019 GGGGTGGGCGCAGAGCTGCTGGTCGACGTGGGTCAGAGGCTGCGCCGTGGTGAGCGCCGCC 398123241 98512 NM_000194.2(HPRT1):c.486-1G>A HPRT1 Oct 22, 2013 MedGen:CN517202 not provided germline X 134498389 TATGTTATATGTCACATTTTGTAATTAACAGCTTGCTGGTGAAAAGGACCCCACGAAGTGT 797045041 205795 NM_001396.3(DYRK1A):c.1400G>A (p.Arg467Gln) DYRK1A Dec 19, 2016 MedGen:C3279839,OMIM:614104,Orphanet:ORPHA464306;MedGen:CN517202 Mental retardation, autosomal dominant 7;not provided de novo;germline 21 37505443 TAAGGATGCTTGATTATGACCCCAAAACTCGAATTCAACCTTATTATGCTCTGCAGCACAG 267606613 24694 m.9952G>A MT-CO3 Jul 01, 1998 MedGen:C0268237,OMIM:220110,Orphanet:ORPHA254905,SNOMED CT:67434000 Hepatic failure, early-onset, and neurologic disorder due to cytochrome C oxidase deficiency germline MT 9952 CCTGATACTGGCATTTTGTAGATGTGGTTTGACTATTTCTGTATGTCTCCATCTATTGATG 398123351 98808 NM_000404.3(GLB1):c.1769G>A (p.Arg590His) GLB1 Nov 06, 2013 MedGen:C0268272,OMIM:230600,Orphanet:ORPHA79256,SNOMED CT:18756002;MedGen:C0268273,OMIM:230650,Orphanet:ORPHA79257;MedGen:C0268271,OMIM:230500,Orphanet:ORPHA79255,SNOMED CT:238026007;MedGen:C0086652,OMIM:253010,Orphanet:ORPHA309310,SNOMED CT:238044004 GM1 gangliosidosis type 2;Gangliosidosis GM1 type 3;Infantile GM1 gangliosidosis;Mucopolysaccharidosis, MPS-IV-B germline 3 32997310 AGGTCTGGATTAATGGCTTTAACCTTGGCCGCTATTGGCCAGCCCGGGGCCCTCAGTTGAC 121917734 28274 NM_000119.2(EPB42):c.929G>A (p.Arg310Gln) EPB42 Mar 13, 2014 MedGen:C2675192,OMIM:612690 Spherocytosis type 5 germline 15 43208769 GACACTCCGCCCCTCTTCTCACAGTGCTGCGATGCCTGGGAATCCCTGCCCGCGTGGTGAC -1 434549 NM_006513.3(SARS):c.514G>A (p.Asp172Asn) SARS Oct 10, 2017 MedGen:CN525653,OMIM:617709 NEURODEVELOPMENTAL DISORDER WITH MICROCEPHALY, ATAXIA, AND SEIZURES germline 1 109230944 TGTACAGTCAGGAAGAAGTACTCTCATGTGGACCTGGTGGTGATGGTAGATGGCTTTGAAG 104894579 78484 NM_000891.2(KCNJ2):c.899G>A (p.Gly300Asp) KCNJ2 Aug 06, 2015 MedGen:C1563715,OMIM:170390,Orphanet:ORPHA37553,SNOMED CT:422348008;MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000 Andersen Tawil syndrome;Congenital long QT syndrome germline 17 70175938 CAGACTTTGAAATCGTGGTCATACTGGAAGGCATGGTGGAAGCCACTGCCATGACGACACA 886041374 265088 NM_000444.5(PHEX):c.2071-1G>A PHEX Jul 12, 2016 MedGen:C0733682,OMIM:307800,Orphanet:ORPHA89936,SNOMED CT:82236004;MedGen:CN517202 Familial X-linked hypophosphatemic vitamin D refractory rickets;not provided germline X 22245332 GCTCATTTGTTGGGATGCTTTTCTCTTCTAGGTGAGGTGCAATTCCTACAGACCAGAAGCT 104894053 23934 NM_000193.3(SHH):c.383G>A (p.Trp128Ter) SHH Dec 07, 2015 MedGen:C1840529,OMIM:142945;Human Phenotype Ontology:HP:0006315,MedGen:C1840235,OMIM:147250;MedGen:CN517202 Holoprosencephaly 3;Single median maxillary incisor;not provided germline 7 155806475 CAGGAGTGAAACTGCGGGTGACCGAGGGCTGGGACGAAGATGGCCACCACTCAGAGGAGTC 45517212 58892 NM_000548.4(TSC2):c.2098-1G>A TSC2 Jan 11, 2016 MedGen:C1860707,OMIM:613254;MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000;MedGen:CN517202 Tuberous sclerosis 2;Tuberous sclerosis syndrome;not provided germline 16 2072240 GGCCCTGTCCTGACGCCTCCTCTCCTCGCAGGAGTCTGACTGGAAGGTGCTGAAGCTGGTT 369574719 430978 NM_000158.3(GBE1):c.785G>A (p.Arg262His) GBE1 Nov 15, 2016 MedGen:C1849722,OMIM:263570,Orphanet:ORPHA206583 Polyglucosan body disease, adult paternal 3 81642988 TTCTTTTTGCTGTGTTCTTCATTGTTAGCCGTTATGGAACACCTGAAGAGCTACAAGAACT 104886070 35665 NM_000495.4(COL4A5):c.791G>A (p.Gly264Asp) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108580543 TTTCCCCTACTACTGCATAGGGACTTCCTGGTGACCGAGGGCCTCCTGGACCTCCAGGGAT 121908508 20724 NM_001169109.1(SCO2):c.107G>A (p.Trp36Ter) SCO2 Nov 01, 2008 MedGen:C1858424,OMIM:604377,Orphanet:ORPHA1561 Cardioencephalomyopathy, fatal infantile, due to cytochrome c oxidase deficiency germline 22 50524305 TGGGAGGCCAGGCCCTGCATCTGAGGTCCTGGCTTTTGTCAAGGCAGGGCCCTGCAGAGAC 587777482 143177 NM_001424.5(EMP2):c.28G>A (p.Ala10Thr) EMP2 Jun 05, 2014 MedGen:C4014507,OMIM:615861,Orphanet:ORPHA69061 Nephrotic syndrome, type 10 germline 16 10547590 AAAATGTTGGTGCTTCTTGCTTTCATCATCGCCTTCCACATCACCTCTGCAGCCTTGCTGT 886042006 264402 NM_000503.5(EYA1):c.418+1G>A EYA1 Sep 19, 2016 MedGen:CN517202 not provided germline 8 71321733 CAGGACAGCCGTACGGCATTTCCTCATATGGTGAGTAACCTGCAACTGTAGTGGTGGCGTT 387906734 38960 m.586G>A MT-TF Nov 01, 2010 Human Phenotype Ontology:HP:0006789,MedGen:C1852373 Encephalopathy, mitochondrial germline MT 586 ACCCCAAAGACACCCCCCACAGTTTATGTAGCTTACCTCCTCAAAGCAATACACTGAAAAT 879254383 434186 NM_000527.4(LDLR):c.3G>A (p.Met1Ile) LDLR - MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11089551 GGGACACTGCCTGGCAGAGGCTGCGAGCATGGGGCCCTGGGGCTGGAAATTGCGCTGGACC 68132885 413958 NM_000089.3(COL1A2):c.1197+5G>A COL1A2 - MedGen:C0023931,OMIM:166200,SNOMED CT:385482004 Osteogenesis imperfecta type I unknown 7 94410532 GCCCTCCAGGACCTCCTGGGCTGAGAGTAGGTTTCAAATGCTCCCAACACCCTAACACACC 587777684 153866 NM_019105.6(TNXB):c.3991G>A (p.Gly1331Arg) TNXB Jul 01, 2013 MedGen:C4014831,OMIM:615963 Vesicoureteral reflux 8 germline 6 32081419 CCCGACCGGAAGTATAAGATGAACCTCTACGGGCTTCGTGGCAGGCAGCGTGTGGGGCCCG 104893893 29881 NM_002185.4(IL7R):c.651G>A (p.Trp217Ter) IL7R Dec 01, 1998 MedGen:C1837028,OMIM:608971 Severe combined immunodeficiency, autosomal recessive, T cell-negative, B cell-positive, NK cell-positive germline 5 35873593 CATCCCTGATCACTATTTTAAAGGCTTCTGGAGTGAATGGAGTCCAAGTTATTACTTCAGA 876660141 235732 NM_001042492.2(NF1):c.5269-1G>A NF1 May 17, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003 Hereditary cancer-predisposing syndrome;Neurofibromatosis, type 1 germline 17 31327498 TCCACTTCACCCCGTCACCACCACTTTCCAGGTTGGTTCTACTGCTGTCCAAGTAACTTCA 886041780 264353 NM_023110.2(FGFR1):c.1431-1G>A FGFR1 Jul 12, 2016 MedGen:CN517202 not provided germline 8 38417992 AACTTATGCCACTCTCTGTTTCCCCCGAAAGACTGGTCTTAGGCAAACCCCTGGGAGAGGG 387907294 45801 NM_022787.3(NMNAT1):c.25G>A (p.Val9Met) NMNAT1 Sep 01, 2012 MedGen:C1837873,OMIM:608553 Leber congenital amaurosis 9 germline 1 9972098 CTTACCATGGAAAATTCCGAGAAGACTGAAGTGGTTCTCCTTGCTTGTGGTTCATTCAATC 104895222 27379 NM_001065.3(TNFRSF1A):c.350G>A (p.Cys117Tyr) TNFRSF1A Apr 02, 1999 MedGen:C1275126,OMIM:142680,Orphanet:ORPHA32960,SNOMED CT:403833009 TNF receptor-associated periodic fever syndrome (TRAPS) germline 12 6333489 CAGAAATGGGTCAGGTGGAGATCTCTTCTTGCACAGTGGACCGGGACACCGTGTGTGGCTG 9332964 18390 NM_000348.3(SRD5A2):c.680G>A (p.Arg227Gln) SRD5A2 Jun 20, 2017 MedGen:C0268297,OMIM:264600,Orphanet:ORPHA753,SNOMED CT:57514000;MedGen:C0268297,OMIM:264600,Orphanet:ORPHA753,SNOMED CT:57514000;MedGen:C0268297,OMIM:264600,Orphanet:ORPHA753,SNOMED CT:57514000;Human Phenotype Ontology:HP:0000054,MedGen:C0266435;MedGen:CN517202 3-Oxo-5 alpha-steroid delta 4-dehydrogenase deficiency;3-Oxo-5 alpha-steroid delta 4-dehydrogenase deficiency;3-Oxo-5 alpha-steroid delta 4-dehydrogenase deficiency;Micropenis;not provided germline;inherited 2 31529325 CATTTTTCTCACTTTGTTTCCTTGGGCTGCGAGCTTTTCACCACCATAGGTAAATTTTTCA 587777194 106828 NM_005017.3(PCYT1A):c.385G>A (p.Glu129Lys) PCYT1A Jan 02, 2014 MedGen:C1837073,OMIM:608940,Orphanet:ORPHA85167 Spondylometaphyseal dysplasia with cone-rod dystrophy germline 3 196247468 CACAACTTCAAAGGCTTCACGGTGATGAACGAGAATGAGCGCTATGACGCAGTCCAGCACT 764670582 75586 NM_000165.4(GJA1):c.716G>A (p.Arg239Gln) GJA1 Jul 24, 2017 MedGen:C1857496,OMIM:218400;MedGen:CN517202 Craniometaphyseal dysplasia, autosomal recessive type;not provided germline 6 121447563 TCTATGTTTTCTTCAAGGGCGTTAAGGATCGGGTTAAGGGAAAGAGCGACCCTTACCATGC 267608183 21809 NM_153818.1(PEX10):c.600+1G>A PEX10 May 15, 2017 MedGen:C3553947,OMIM:614870;MedGen:CN517202 Peroxisome biogenesis disorder 6A;not provided germline 1 2408451 CTGGCCAAGAGGCTCACGGGGATCACGTACGTAAGTAGCAGGCGCTGAGGGCACAGCTGCT 138213197 133488 NM_006361.5(HOXB13):c.251G>A (p.Gly84Glu) HOXB13 Sep 15, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C3469524;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Prostate cancer susceptibility;not provided germline 17 48728343 CCCCAGCTCCCGTGCCTTATGGTTACTTTGGAGGCGGGTACTACTCCTGCCGAGTGTCCCG 281874660 47360 NM_000495.4(COL4A5):c.1216G>A (p.Gly406Ser) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108591108 CCTGGCCCTCCTGGATTTCCTGGAGAAAGGGGTCAGAAAGGTGATGAAGGACCACCTGGAA 121918270 17211 NM_022370.3(ROBO3):c.1082G>A (p.Gly361Glu) ROBO3 Jun 04, 2004 MedGen:C1846496,OMIM:607313,Orphanet:ORPHA2744 Gaze palsy, familial horizontal, with progressive scoliosis germline 11 124871062 CCCAGCCCCAGGACCAGATGGCAGCTCCTGGAGAGAGCGTGGCTTTCCAGTGCGAGACCAA 587780077 224943 NM_000551.3(VHL):c.445G>A (p.Ala149Thr) VHL Feb 26, 2016 MedGen:C0019562,OMIM:193300,Orphanet:ORPHA892,SNOMED CT:46659004 Von Hippel-Lindau syndrome germline 3 10146618 TCTCTCAATGTTGACGGACAGCCTATTTTTGCCAATATCACACTGCCAGGTACTGACGTTT 759130031 234531 NM_005591.3(MRE11):c.659+1G>A MRE11 Jan 10, 2017 MedGen:C1858391,OMIM:604391,Orphanet:ORPHA251347;MedGen:C0027672,SNOMED CT:699346009 Ataxia-telangiectasia-like disorder 1;Hereditary cancer-predisposing syndrome germline;unknown 11 94476288 GTTTAACTTATTTGTGATTCATCAGAACAGGTAAAACTTTTCTCTGAAAAAGTTTGAGCCA 72549321 31346 NM_001002294.2(FMO3):c.154G>A (p.Ala52Thr) FMO3 Sep 01, 1999 Human Phenotype Ontology:HP:0003614,MedGen:C0342739,OMIM:602079,Orphanet:ORPHA468726,SNOMED CT:237959005 Trimethylaminuria germline 1 171103806 CATTCACAGGACCATGCAGAGGAGGGCAGGGCTAGCATTTACAAATCAGTCTTTTCCAACT 191582628 39768 NM_203290.3(POLR1C):c.836G>A (p.Arg279Gln) POLR1C Jun 01, 2017 MedGen:C1855433,OMIM:248390;MedGen:CN239289;MedGen:CN517202 Mandibulofacial dysostosis, Treacher Collins type, autosomal recessive;Treacher Collins Syndrome, Recessive;not provided germline 6 43520962 GTAAAAAGGTGGCCAGAGTTGCCAACCCCCGGCTGGATACCTTCAGCAGAGAAATCTTCCG 767795673 361759 NM_007198.3(PLPBP):c.207+1G>A PLPBP Jan 07, 2017 MedGen:C4310632,OMIM:617290 Epilepsy, early-onset, vitamin b6-dependent germline 8 37765634 CATGGGCAGCGCACTTTTGGCGAGAACTACGTAAGAGCCCTTTCCTGAAGCCCTTTGGAAG 104893631 23196 NM_080916.2(DGUOK):c.425G>A (p.Arg142Lys) DGUOK Sep 01, 2002 MedGen:C3151513,OMIM:251880,Orphanet:ORPHA279934 Mitochondrial DNA-depletion syndrome 3, hepatocerebral germline 2 73946888 AGGCCAGGAAGCCAGTACAGATCTTTGAGAGGTCTGTGTACAGTGACAGGTAAAATGCCAA 104894193 20054 NM_021926.3(ALX4):c.653G>A (p.Arg218Gln) ALX4 Nov 08, 2012 MedGen:C1865044,OMIM:609597 Parietal foramina 2 germline 11 44275472 AGAGCAACAAGGGCAAGAAGCGGCGGAACCGGACCACCTTCACCAGCTACCAGCTGGAGGA 137852290 25574 NM_000292.2(PHKA2):c.557G>A (p.Arg186His) PHKA2 Nov 01, 1998 MedGen:C2748941 Glycogen storage disease IXa2 germline X 18945139 TTCTCCCCCAGGATTATGGAATGTGGGAGCGTGGAGATAAGACTAATCAGGGCATCCCGGA 63750512 29294 NM_005910.5(MAPT):c.1165G>A (p.Gly389Arg) MAPT May 16, 2017 MedGen:C0236642,OMIM:172700,SNOMED CT:13092008;MedGen:CN517202 Pick's disease;not provided germline 17 46024010 CGCGAGAACGCCAAAGCCAAGACAGACCACGGGGCGGAGATCGTGTACAAGTCGCCAGTGG 63750235 426820 NM_001171.5(ABCC6):c.3999G>A (p.Val1333=) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16154915 CTGGATCGACGGGGTCCCCATTGCCCACGTGGGGCTGCACACACTGCGCTCCAGGATCAGC 878853114 237469 NM_000495.4(COL4A5):c.1339+1G>A COL4A5 Feb 09, 2016 MedGen:CN517202 not provided germline X 108591232 CTGGCCCTGCTGGCCCTCACATTCCTCCTAGTAAGCTATATTTTTCTCCTATTAAGTTCTA 771937610 200180 NM_000050.4(ASS1):c.1088G>A (p.Arg363Gln) ASS1 Mar 15, 2016 MedGen:CN517202 not provided germline 9 130494984 TCCTCAAGGGCCAGGTGTACATCCTCGGCCGGGAGTCCCCACTGTCTCTCTACAATGAGGA 515726209 136371 NM_007272.2(CTRC):c.217G>A (p.Ala73Thr) CTRC Mar 13, 2014 MedGen:C0238339,OMIM:167800,Orphanet:ORPHA676,SNOMED CT:68072000 Hereditary pancreatitis germline 1 15440577 TTGATTGCTAGCAACTTCGTCCTCACTGCCGCCCACTGCATCAGGTGTGCGGGGATGATAC 1057519327 361918 NM_000248.3(MITF):c.635-1G>A MITF Aug 15, 2017 MedGen:C4310625,OMIM:617306;MedGen:C1860339,OMIM:193510 Coloboma, osteopetrosis, microphthalmia, macrocephaly, albinism, and deafness;Waardenburg syndrome type 2A germline 3 69956454 TAATAGCCTTTCCTGTGCTCTTTTCTTGAAGTTGAACGAAGAAGAAGATTTAACATAAATG 786204250 186270 NM_032043.2(BRIP1):c.2447G>A (p.Trp816Ter) BRIP1 Jan 21, 2015 MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006 Familial cancer of breast germline 17 61715996 AATTGAGAGGTCTTCTACCTGGCCGTCAGTGGTATGAAATTCAAGCATACAGGGCCTTAAA 104894334 32871 NM_000486.5(AQP2):c.439G>A (p.Ala147Thr) AQP2 Oct 02, 2015 MedGen:C4015884;Human Phenotype Ontology:HP:0009806,MedGen:C0162283,Orphanet:ORPHA223,SNOMED CT:111395007 Diabetes insipidus, nephrogenic, autosomal recessive;Nephrogenic diabetes insipidus germline 12 49954233 CTGACACTGCAGCTGGTGCTCTGCATCTTCGCCTCCACCGATGAGCGCCGCGGAGAGAACC 121965016 15289 NM_000398.6(CYB5R3):c.875G>A (p.Gly292Asp) CYB5R3 May 01, 2008 MedGen:C2749559 Methemoglobinemia, type I germline 22 42619804 ACGCCTGCCTTCCCAACCTGGACCACGTGGGCCACCCCACGGAGCGCTGCTTCGTCTTCTG 863225087 214750 NM_002435.2(MPI):c.1253G>A (p.Arg418His) MPI - MedGen:C1865145,OMIM:602579,Orphanet:ORPHA79319 Congenital disorder of glycosylation type 1B inherited 15 74897711 TTACTGAGCCGAAGGACCTGCTGATATTCCGTGCCTGCTGTCTGCTGTAAAGGCTGCAGCC 121909575 32977 NM_001042425.1(TFAP2A):c.773G>A (p.Gly258Glu) TFAP2A May 01, 2008 MedGen:C0376524,OMIM:113620 Branchiooculofacial syndrome germline 6 10402590 TGTGAAACAGGGCGAAGTCTAAAAATGGAGGAAGATCTTTAAGAGAAAAACTGGACAAAAT 45590836 18566 NM_005957.4(MTHFR):c.1743G>A (p.Met581Ile) MTHFR Jul 03, 2003 MedGen:C1856058,OMIM:236250 Homocysteinemia due to MTHFR deficiency germline 1 11791216 GCCCACCGTAGTGGATCCCGTCAGCTTCATGTTCTGGAAGGTAAAGGAGCCGGGGGCAAGC 886058642 295323 NM_000094.3(COL7A1):c.1637-1G>A COL7A1 Jun 14, 2016 MedGen:C0079294,Orphanet:ORPHA303,SNOMED CT:254185007;MedGen:CN517202 Dystrophic epidermolysis bullosa;not provided germline 3 48590817 CCCTGCCCACCTACCCTGACTTCTCTCTTAGGGGTTGAGCGGACCCTGGTGCTTCCTGGGA 690016548 171840 NM_005211.3(CSF1R):c.2330G>A (p.Arg777Gln) CSF1R Dec 18, 2014 Gene:8156,MedGen:C1857300,OMIM:221820 Hereditary diffuse leukoencephalopathy with spheroids germline 5 150056331 CCTGCAGTGCTTTCCCTCAGTGCATCCACCGGGACGTGGCAGCGCGTAACGTGCTGTTGAC 786202118 181747 NM_000465.3(BARD1):c.2268G>A (p.Trp756Ter) BARD1 Jun 20, 2014 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 2 214728742 CCCAGAGAGGGTTCGGCAGGGCAAAGTCTGGAAGGCTCCTTCGAGCTGGTTTATAGACTGT 1057517789 360585 NM_000444.5(PHEX):c.500G>A (p.Trp167Ter) PHEX Dec 05, 2016 MedGen:CN517202 not provided germline X 22077539 TACACATCCTACGGCATTCACCTTTCCGCTGGCCCGTGCTTGAATCTAATATTGGCCCTGA 104894699 28512 NM_004977.2(KCNC3):c.1259G>A (p.Arg420His) KCNC3 Aug 08, 2016 MedGen:C1854488,OMIM:605259,Orphanet:ORPHA98768 Spinocerebellar ataxia 13 germline 19 50323694 TGGGCTTCCTGCGGGTGGTCCGCTTCGTCCGCATCCTGCGCATCTTCAAGCTGACCCGGCA 63750734 33136 NM_000484.3(APP):c.2143G>A (p.Val715Met) APP Jun 23, 2017 MedGen:C1863052;MedGen:CN517202 Alzheimer disease, type 1;not provided germline 21 25891790 CTCATGGTGGGCGGTGTTGTCATAGCGACAGTGATCGTCATCACCTTGGTGATGCTGAAGA 863225370 214667 NM_000038.5(APC):c.645+1G>A APC Apr 27, 2017 MedGen:C2713442,OMIM:175100;MedGen:CN517202 Familial adenomatous polyposis 1;not provided germline;unknown 5 112780904 ACCTGCCAGGATATGGAAAAACGAGCACAGGTAAGTTACTTGTTTCTAAGTGATAAAACAG 875989850 227737 NM_013334.3(GMPPB):c.760G>A (p.Val254Met) GMPPB Jan 26, 2017 MedGen:C3714932,OMIM:615352,Orphanet:ORPHA363623;MedGen:CN517202 Muscular dystrophy-dystroglycanopathy (limb-girdle), type c, 14;not provided germline 3 49722239 CTGTGCTCAGGCCCTGGCATTGTGGGCAACGTGCTGGTGGTGAGGCCCTTGCCCAGCCCAT 121908978 21972 NM_001164277.1(SLC37A4):c.83G>A (p.Arg28His) SLC37A4 Feb 26, 1999 MedGen:C0268146,OMIM:232220,SNOMED CT:30102006;MedGen:CN517202 Glucose-6-phosphate transport defect;not provided germline 11 119029287 TTGGGGGCTACAGCCTGTATTACTTCAATCGCAAGACCTTCTCCTTTGTCATGCCATCATT 121918514 28286 NM_002739.4(PRKCG):c.353G>A (p.Gly118Asp) PRKCG Apr 18, 2013 MedGen:C1854369,OMIM:605361,Orphanet:ORPHA98763 Spinocerebellar ataxia 14 germline 19 53889705 ACAGCAGCCCCACCTTCTGCGACCACTGTGGCTCCCTCCTCTACGGGCTTGTGCACCAGGG 397515524 76500 NM_000370.3(TTPA):c.421G>A (p.Glu141Lys) TTPA Jun 27, 2013 MedGen:C1848533,OMIM:277460,Orphanet:ORPHA96 Ataxia with vitamin E deficiency not provided 8 63066035 GACGTATTTCGAGTAAGTCTAATCACATCCGAGCTTATTGTACAGGAGGTAGAAACTCAGC 104893998 20252 NM_018965.3(TREM2):c.233G>A (p.Trp78Ter) TREM2 Mar 12, 2015 MedGen:C1857316,OMIM:221770 Polycystic lipomembranous osteodysplasia with sclerosing leukoencephalopathy germline 6 41161421 ACTTGTGGCTGCTGTCCTTCCTGAGGAGGTGGAATGGGAGCACAGCCATCACAGACGATAC 747348765 440164 NM_001080463.1(DYNC2H1):c.6910G>A (p.Ala2304Thr) DYNC2H1 Oct 04, 2017 MedGen:CN674505;MedGen:CN517202 Short-rib polydactyly syndrome type III;not provided germline;unknown 11 103187356 TGCATTTTTCGTAGGATGCTGCTCAGGTACGCATTTTCACAACTCCGGTCCACTCAAATTG 121912826 32528 NM_000091.4(COL4A3):c.3044G>A (p.Gly1015Glu) COL4A3 May 01, 2002 MedGen:C0241908,OMIM:141200,SNOMED CT:236421001 Benign familial hematuria germline 2 227290062 CTGGAGAACCAGGACTGCGTGGTATACCAGGAAGCATGGGGAACATGGGCATGCCAGGTAA -1 417082 NM_019098.4(CNGB3):c.2103+1G>A CNGB3 Mar 27, 2017 MedGen:C1849792,OMIM:262300;Human Phenotype Ontology:HP:0007754,MedGen:C0730292 Achromatopsia 3;Macular dystrophy unknown 8 86578688 CTCAAATTGAAGCGAGAGCAAGCAGCTCAGGTAATAAGGTGGAGTGAATGGACGGCTGTCA 863223849 209623 NM_003242.5(TGFBR2):c.1276G>A (p.Ala426Thr) TGFBR2 Jun 14, 2013 MedGen:CN517202 not provided germline 3 30674126 TTGCTATAGGTGGGAACTGCAAGATACATGGCTCCAGAAGTCCTAGAATCCAGGATGAATT 202102042 132360 NM_006172.3(NPPA):c.449G>A (p.Arg150Gln) NPPA Feb 01, 2013 MedGen:C3810401,OMIM:615745 Atrial standstill 2 germline 1 11847114 CCCAGAGCGGACTGGGCTGTAACAGCTTCCGGGTAAGAGGAACTGGGGATGGAAATGGGAT 72659357 19990 NM_006371.4(CRTAP):c.3G>A (p.Met1Ile) CRTAP Dec 28, 2006 MedGen:C1853162,OMIM:610682 Osteogenesis imperfecta type 7 germline 3 33114080 CCTTCCTTCCTTCCTTTCGCCGGGCGCGATGGAGCCGGGGCGCCGGGGGGCCGCGGCGCTG 34371500 25225 NM_000132.3(F8):c.822G>A (p.Trp274Ter) F8 Jan 01, 1995 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154969518 GATTGGATGCCACAGGAAATCAGTCTATTGGCATGTGATTGGAATGGGCACCACTCCTGAA 191284403 16618 NM_052910.2(SLITRK1):c.*689G>A SLITRK1 May 01, 2010 Gene:2973,MedGen:C0040517,OMIM:137580 Tourette Syndrome germline 13 83878728 GAAAGTGCCATTTCGCCATTATTTGTGATCGGTAGGCAGTTCAGAGCATAAGTTAACTGTG 137853269 25856 NM_000444.5(PHEX):c.254G>A (p.Cys85Tyr) PHEX Apr 01, 1997 MedGen:C0733682,OMIM:307800,Orphanet:ORPHA89936,SNOMED CT:82236004 Familial X-linked hypophosphatemic vitamin D refractory rickets germline X 22047116 ATCCTTGTGATAATTTCTTCCGGTTCGCTTGTGATGGCTGGATAAGCAATAATCCAATTCC -1 445874 NM_002734.4(PRKAR1A):c.672G>A (p.Trp224Ter) PRKAR1A Oct 05, 2017 MedGen:CN517202 not provided germline 17 68525876 TGTCAAAGCAAAGACAAATGTGAAATTGTGGGGCATCGACCGAGACAGCTATAGAAGAATC 730882158 181302 NM_001195129.1(PRSS56):c.958G>A (p.Gly320Arg) PRSS56 Jan 01, 2011 MedGen:C3150757,OMIM:613517 Microphthalmia, isolated 6 germline 2 232523524 GGGGACGGCTGCGGGGAGCCAGGGAAGCCCGGGGTCTACACCCGCGTGGCAGTGTTCAAGG 137854306 445511 NM_000548.4(TSC2):c.482-1G>A TSC2 Aug 10, 2016 MedGen:CN517202 not provided germline 16 2055401 TCCTCGCAAACTGCCGCCGCTTCTCCCCCAGCTGACTTTGTCCTGCAGTGGATGGATGTTG 104893661 22742 NM_002618.3(PEX13):c.702G>A (p.Trp234Ter) PEX13 Jun 01, 1999 MedGen:C3554000,OMIM:614883 Peroxisome biogenesis disorder 11A germline 2 61032028 GGACCGAGCAGCTACCTCAGCAAAATCTTGGCCAATATTCTTGTTCTTTGCTGTTATCCTT 1057517663 359046 NM_001309444.1(SPARC):c.787G>A (p.Glu263Lys) SPARC Aug 05, 2015 MedGen:C4225301,OMIM:616507 Osteogenesis imperfecta, type xvii germline 5 151664183 GCTCCACTGCGTGCTCCCCTCATCCCCATGGAGCATTGCACCACCCGCTTTTTCGAGACCT 80338664 76457 NM_000081.3(LYST):c.8583G>A (p.Trp2861Ter) LYST Feb 16, 2012 MedGen:C0007965,OMIM:214500,Orphanet:ORPHA167,SNOMED CT:111396008 Chédiak-Higashi syndrome not provided 1 235733859 AACTGAAGAAGGAGTGAATAAAGCTGCTTGGCAGAAAACAGTTAACAATAATCAACAAAGG 1057517794 360559 NM_000444.5(PHEX):c.1483-1G>A PHEX Sep 08, 2015 MedGen:CN517202 not provided germline X 22178272 GAACAATGATGTTGTGGTTTGTTTTATTCAGATCAAGTTTTCAGAAGCCGACTACTTTGGC 587777635 153742 NM_080860.3(RSPH1):c.281G>A (p.Trp94Ter) RSPH1 Jul 01, 2014 MedGen:C3809634,OMIM:615481 Primary ciliary dyskinesia 24 germline 21 42486455 TTGCCTTTGTGTTGTTCCTTTCAGGAGAGTGGGCAAATGACCTGCGGCACGGCCATGGCGT 1057520717 378585 NM_001849.3(COL6A2):c.1572+1G>A COL6A2 May 11, 2015 MedGen:CN517202 not provided germline 21 46122159 TTCAGCTACCCAGGACCCCGAGGAGCACCCGTGAGTCACAGCCTGGGATGGCAGCTCCCAG 775341740 359556 NM_006846.3(SPINK5):c.2240+1G>A SPINK5 May 25, 2016 MedGen:CN517202 not provided germline 5 148118565 CAATCAGTGTACCATGTGTAAAGCAAAATTGTAAGTATTTCTCTCAACAGGCATGTCTAAA 527236098 152788 NM_000322.4(PRPH2):c.499G>A (p.Gly167Ser) PRPH2 Feb 12, 2016 Human Phenotype Ontology:HP:0000547,MeSH:D012174,MedGen:C0035334,OMIM:268000,Orphanet:ORPHA791,SNOMED CT:28835009;MedGen:CN517202 Retinitis pigmentosa;not provided germline 6 42721836 GACATGCTGCAGATCGAGTTCAAATGCTGCGGCAACAACGGTTTTCGGGACTGGTTTGAGA 753237335 438528 NM_017807.3(OSGEP):c.974G>A (p.Arg325Gln) OSGEP Oct 26, 2017 MedGen:CN570505,OMIM:617729 GALLOWAY-MOWAT SYNDROME 3 germline 14 20447274 CCATGTTTCTTCTGTTTTTCCACAGGTATCGGACAGATGAAGTAGAGGTGACCTGGAGGGA -1 442450 NM_000166.5(GJB1):c.548G>A (p.Arg183His) GJB1 Dec 23, 2015 MedGen:CN517202 not provided germline X 71224255 GCCCCAACACAGTGGACTGCTTCGTGTCCCGCCCCACCGAGAAAACCGTCTTCACCGTCTT 879253837 224636 NM_000255.3(MUT):c.974G>A (p.Gly325Asp) MUT - MedGen:C1855114,OMIM:251000 Methylmalonic aciduria due to methylmalonyl-CoA mutase deficiency germline 6 49453694 TCTATATGGAAATAGCAAAGATGAGAGCTGGTAGAAGACTCTGGGCTCACTTAATAGAGAA 199422206 27989 NM_003035.2(STIL):c.2826+1G>A STIL Sep 01, 2009 MedGen:C2675187,OMIM:612703 Primary autosomal recessive microcephaly 7 germline 1 47262902 GATAACCAGAAAATTTACCAGGATTTATTGGTAAGAAAATGTAGAGCATTTCATCTTTTTG -1 473466 NM_000249.3(MLH1):c.1791G>A (p.Trp597Ter) MLH1 Sep 19, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 3 37047578 GCTTGCCTTAGATAGTCCAGAGAGTGGCTGGACAGAGGAAGATGGTCCCAAAGAAGGACTT 121913123 31275 NM_000143.3(FH):c.698G>A (p.Arg233His) FH Jul 20, 2017 MedGen:C0342770,OMIM:606812,Orphanet:ORPHA24,SNOMED CT:237983002;MedGen:C0027672,SNOMED CT:699346009;Human Phenotype Ontology:HP:0007437,MedGen:C1708350,OMIM:150800,Orphanet:ORPHA523;MedGen:CN517202 Fumarase deficiency;Hereditary cancer-predisposing syndrome;Multiple cutaneous leiomyomas;not provided germline;unknown 1 241508643 AAGAGTTTGCACAGATCATCAAGATTGGACGTACTCATACTCAGGATGCTGTTCCACTTAC 587779623 107092 NM_000090.3(COL3A1):c.2113G>A (p.Gly705Arg) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188999375 AGAGGTGGAGCTGGTCCCCCTGGTCCCGAAGGAGGAAAGGTAACTCCACAGCATTCCATTC 121912484 29584 NM_000228.2(LAMB3):c.1830G>A (p.Trp610Ter) LAMB3 Feb 01, 1998 MedGen:C0079683,OMIM:226700,Orphanet:ORPHA79404,SNOMED CT:400140006 Junctional epidermolysis bullosa gravis of Herlitz germline 1 209625794 TAGACTCCGCAATGCCACCGCCAGCCTGTGGTCAGGGCCTGGGCTGGAGGACCGTGGCCTG 886039727 260078 NM_017882.2(CLN6):c.198+1G>A CLN6 Aug 12, 2016 MedGen:CN517202 not provided germline 15 68218535 GTTCTGGACTTTGGGCGTCCCATTGCCATGGTGAGTGTGAAATGGTGCACAGGGCTCTGAC -1 485690 NM_006996.2(SLC19A2):c.1082G>A (p.Trp361Ter) SLC19A2 Aug 08, 2016 MedGen:C0342287,OMIM:249270,Orphanet:ORPHA49827,SNOMED CT:237617006 Megaloblastic anemia, thiamine-responsive, with diabetes mellitus and sensorineural deafness germline 1 169468785 TTGGTTATATAAAAATATCCTGGTCAACTTGGGGAGAAATGACATTATCTCTCTTTTCTCT 377767347 36173 NM_005359.5(SMAD4):c.1082G>A (p.Arg361His) SMAD4 Aug 03, 2017 Human Phenotype Ontology:HP:0030078,MeSH:C538231,MedGen:C0152013;MedGen:C0278701;Human Phenotype Ontology:HP:0011459,MedGen:C0152018,Orphanet:ORPHA70482;MeSH:D015179,MedGen:CN236642;MedGen:C0027672,SNOMED CT:699346009;na;Human Phenotype Ontology:HP:0100013,MeSH:D001943,MedGen:C1458155,Orphanet:ORPHA180250,SNOMED CT:126926005;Human Phenotype Ontology:HP:0006725,MedGen:C0281361;MeSH:C535575,MedGen:C1168401,OMIM:275355,Orphanet:ORPHA67037;MeSH:D002583,MedGen:CN236667;MedGen:CN517202 Adenocarcinoma of lung;Adenocarcinoma of stomach;Carcinoma of esophagus;Colorectal Neoplasms;Hereditary cancer-predisposing syndrome;JP and JP/HHT;Neoplasm of the breast;Pancreatic adenocarcinoma;Squamous cell carcinoma of the head and neck;Uterine cervical neoplasms;not provided germline;somatic 18 51065549 ATGGATACGTGGACCCTTCTGGAGGAGATCGCTTTTGTTTGGGTCAACTCTCCAATGTCCA 5030869 25402 NM_000402.4(G6PD):c.1093G>A (p.Ala365Thr) G6PD May 24, 2017 MedGen:C2720289,OMIM:300908,Orphanet:ORPHA466026;na Anemia, nonspherocytic hemolytic, due to G6PD deficiency;G6PD CHATHAM germline;unknown X 154532990 GACCCCACGGTGCCCCGCGGGTCCACCACCGCCACTTTTGCAGCCGTCGTCCTCTATGTGG 121908574 21205 NM_004328.4(BCS1L):c.1057G>A (p.Val353Met) BCS1L Sep 01, 2001 MedGen:C1852372,OMIM:124000 Mitochondrial complex III deficiency germline 2 218663183 CGCCCGGGGCGAGTGGACCTGAAGGAGTACGTGGGCTACTGCTCACACTGGCAGCTGACCC 121908557 20958 NM_000334.4(SCN4A):c.2024G>A (p.Arg675Gln) SCN4A Aug 12, 2016 MedGen:CN074266,OMIM:170500;Human Phenotype Ontology:HP:0003198,MedGen:C0026848;MedGen:C1868433;MedGen:CN517202 Hyperkalemic Periodic Paralysis Type 1;Myopathy;Normokalemic periodic paralysis, potassium-sensitive;not provided germline;paternal 17 63957514 TCACCCTTGCCCTCCCTGCTTGGCAGCTGCGGGTCTTCAAGCTGGCCAAGTCGTGGCCAAC 730880027 178367 NM_006000.2(TUBA4A):c.1220G>A (p.Trp407Ter) TUBA4A Oct 22, 2014 MedGen:C4015512,OMIM:616208 Amyotrophic lateral sclerosis 22 with or without frontotemporal dementia germline 2 219250479 TGATGTATGCCAAGAGGGCGTTTGTGCACTGGTATGTGGGTGAGGGCATGGAGGAGGGTGA 121918153 15708 NM_000312.3(PROC):c.659G>A (p.Arg220Gln) PROC Jun 14, 2016 MedGen:C2674321,OMIM:176860 Thrombophilia, hereditary, due to protein C deficiency, autosomal dominant germline 2 127426208 CGCGGCTCATTGATGGGAAGATGACCAGGCGGGGAGACAGCCCCTGGCAGGTGGGAGGCGA -1 426396 NM_033380.2(COL4A5):c.679G>A (p.Gly227Ser) COL4A5 Jun 09, 2017 MedGen:CN517202 not provided germline X 108578111 AATATGGGCTTAAATTTCCAGGGACCCAAAGGTGAAAAAGTGAGTAAAGAAAGAGAGCTGG 757645341 241562 NM_000020.2(ACVRL1):c.822G>A (p.Trp274Ter) ACVRL1 Jul 18, 2017 MedGen:C1838163,OMIM:600376 Hereditary hemorrhagic telangiectasia type 2 germline 12 51915274 GACCTCCCGCAACTCGAGCACGCAGCTGTGGCTCATCACGCACTACCACGAGCACGGCTCC 121907996 18899 NM_000053.3(ATP7B):c.2906G>A (p.Arg969Gln) ATP7B Sep 27, 2016 MedGen:C0019202,OMIM:277900,Orphanet:ORPHA905,SNOMED CT:88518009;MedGen:CN517202 Wilson disease;not provided germline;unknown 13 51946438 AGCACATCTCCCAGACAGAGGTGATCATCCGGTTTGCTTTCCAGACGTCCATCACGGTGCT 587779604 107066 NM_000090.3(COL3A1):c.791G>A (p.Gly264Glu) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188990353 CTGGGATACCTGGATTCCCTGGTATGAAAGGACACAGAGTAAGTAGAGTTTCTAAGTTGTT 587779516 106961 NM_000090.3(COL3A1):c.996+1G>A (p.Gly318_Pro332del) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188992229 GACGGTGCTCGAGGCAGTGATGGTCAACCAGTAAGTAACTTTCTATCTCTTATGTGTTGTA 111033802 36643 NM_000155.3(GALT):c.983G>A (p.Arg328His) GALT Dec 04, 2012 MedGen:C0268151,OMIM:230400,Orphanet:ORPHA79239,SNOMED CT:124354006 Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase not provided 9 34649488 TGCACGCTCATTACTACCCTCCGCTCCTGCGCTCTGCCACTGTCCGGAAATTCATGGTTGG 777849213 411619 NM_033500.2(HK1):c.2503G>A (p.Glu835Lys) HK1 Apr 27, 2017 MedGen:CN242289,OMIM:617460 Retinitis pigmentosa 79 germline 10 69398758 GGCATGGCTGCGGTTGTGGATAAGATCCGCGAGAACAGAGGACTGGACCGTCTGAATGTGA 121918150 15705 NM_000312.3(PROC):c.1000G>A (p.Gly334Ser) PROC Jan 26, 2015 MedGen:C2674321,OMIM:176860;MedGen:C2676759,OMIM:612304 Thrombophilia, hereditary, due to protein C deficiency, autosomal dominant;Thrombophilia, hereditary, due to protein C deficiency, autosomal recessive germline 2 127428560 GGCCTTGCAGAGCGCGAGCTCAATCAGGCCGGCCAGGAGACCCTCGTGACGGGCTGGGGCT 876657733 228321 NM_206933.2(USH2A):c.8681+1G>A USH2A Nov 03, 2015 MedGen:C1848634,OMIM:276901 Usher syndrome, type 2A germline 1 215877757 GTGGCTTTATGAAGATAAGGGTCTTAGCAGGTGAGATTACAAAAACTATAAAAACAAATGC 121912857 32453 NM_001845.5(COL4A1):c.1685G>A (p.Gly562Glu) COL4A1 Apr 06, 2006 MedGen:C1843512,OMIM:607595 Brain small vessel disease with hemorrhage germline 13 110187181 CCGGCATGCCAGGGAGAGCGGGTTCTCCTGGAAGAGATGGCCATCCGGGTCTTCCTGGCCC 143747297 44169 NM_012123.3(MTO1):c.1282G>A (p.Ala428Thr) MTO1 Apr 11, 2017 MedGen:C3553529,OMIM:614702,Orphanet:ORPHA314637;MedGen:CN517202 Combined oxidative phosphorylation deficiency 10;not provided germline 6 73482061 CTCTTGTAGGGTGTGATAGCCGGAATCAACGCCAGTCTTCGGGTCAGTCGCAAGCCTCCCT 587781233 165790 NM_130838.1(UBE3A):c.1633G>A (p.Gly545Arg) UBE3A Feb 14, 2014 MedGen:C0162635,OMIM:105830,Orphanet:ORPHA72,SNOMED CT:76880004 Angelman syndrome de novo 15 25360443 GAATTTGAAGGAGAACAAGGAGTTGATGAGGGAGGTGTTTCCAAAGAATTTTTTCAGCTGG 1085307216 414153 NM_001204.6(BMPR2):c.353G>A (p.Cys118Tyr) BMPR2 - MedGen:C0152171,OMIM:178600,SNOMED CT:26174007 Primary pulmonary hypertension germline 2 202467624 TTCAGAATGGAACATACCGTTTCTGCTGTTGTAGCACAGATTTATGTAATGTCAACTTTAC 140124953 361166 NM_000547.5(TPO):c.1994G>A (p.Arg665Gln) TPO Jun 10, 2015 MedGen:C1291299,OMIM:274500,SNOMED CT:124204003 Deficiency of iodide peroxidase germline 2 1494027 GTCTCATTGGGAAGCAGATGAAGGCTCTGCGGGACGGTGACTGGTACGTTCCTATCCAGAG 367543072 51100 NM_152490.4(B3GALNT2):c.740G>A (p.Gly247Glu) B3GALNT2 Jun 27, 2013 MedGen:C3554638,OMIM:615181;MedGen:CN517202 Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type a, 11;not provided germline;unknown 1 235470872 ATCTCCACAAAGTGACAGTGAATGATGGAGGGGGAGTTCTCAGAGTCATTACAGTAAGTCG 1057520719 379257 NM_001363.4(DKC1):c.1133G>A (p.Arg378Gln) DKC1 May 08, 2015 MedGen:CN517202 not provided germline X 154773227 GAGTGATCATGGAGAGAGACACTTACCCTCGGAAGTGGGGTTTAGGTCCAAAGGTAAGTGG 397516457 52797 NM_001001430.2(TNNT2):c.281G>A (p.Arg94His) TNNT2 May 11, 2017 MedGen:C1861864,OMIM:115195;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Familial hypertrophic cardiomyopathy 2;Primary familial hypertrophic cardiomyopathy;not provided germline 1 201365291 CGGTCCACCCACAGGACATCCACCGGAAGCGCATGGAGAAGGACCTGAATGAGTTGCAGGC 786205214 188046 NM_001165963.1(SCN1A):c.2214G>A (p.Trp738Ter) SCN1A Feb 01, 2017 MedGen:C1858673,OMIM:604403;MedGen:CN517202 Generalized epilepsy with febrile seizures plus, type 2;not provided de novo;germline 2 166041432 AGAATCCAGGCAGAAATGCCCACCCTGTTGGTATAAATTTTCCAACATATTCTTAATCTGG 786205077 20856 NM_139025.4(ADAMTS13):c.414+1G>A ADAMTS13 Feb 15, 2004 MedGen:C1268935,OMIM:274150,Orphanet:ORPHA93583,SNOMED CT:373420004 Upshaw-Schulman syndrome germline 9 133425613 GTGAAGATGGTCATTCTGACAGAGCCTGAGGTAGGCATGGAGCTGGAACTCAGCACACCAT 769259233 481377 NM_014297.4(ETHE1):c.375+5G>A ETHE1 Nov 16, 2017 MedGen:C1865349,OMIM:602473,Orphanet:ORPHA51188 Ethylmalonic encephalopathy germline 19 43526196 GAGACTCCATCCGCTTCGGGCGCTTCGTGAGTTGGGTGCTGGGTCCCCAAGAGGGTGGTGG 587783600 170114 NM_006579.2(EBP):c.182G>A (p.Trp61Ter) EBP Feb 08, 2013 MedGen:C0282102,OMIM:302960,Orphanet:ORPHA35173 Chondrodysplasia punctata 2 X-linked dominant germline X 48523953 GTCGTGCTGCGGTTGTCCCATTGGGGACTTGGCGGCGACTGTCCCTGTGCTGGTTTGCAGT 121434247 18380 NM_000348.3(SRD5A2):c.547G>A (p.Gly183Ser) SRD5A2 Sep 23, 2013 MedGen:C0268297,OMIM:264600,Orphanet:ORPHA753,SNOMED CT:57514000 3-Oxo-5 alpha-steroid delta 4-dehydrogenase deficiency germline 2 31531371 CCTGGAGAAATCAGCTACAGGATTCCACAAGGTAATGTCTCCCCTGCCCCCAGACTCTCAC 80356598 34701 NM_194248.2(OTOF):c.4275G>A (p.Trp1425Ter) OTOF Apr 26, 2011 MedGen:C1832828,OMIM:601071 Deafness, autosomal recessive 9 not provided 2 26467186 GGAGTCCGAGTTTGATAACTTTGAGGACTGGCTGCACACTTTCAACTTGCTTCGGGGCAAG 606231435 170985 NM_152296.4(ATP1A3):c.2267G>A (p.Arg756His) ATP1A3 Sep 08, 2017 MedGen:C3553788,OMIM:614820;MedGen:C1868681,OMIM:128235,Orphanet:ORPHA71517;MedGen:CN517202 Alternating hemiplegia of childhood 2;Dystonia 12;not provided de novo;germline 19 41970539 CCTGCTCTGAGCCTGCCTGTGCCACAGGCCGCCTGATCTTCGACAACCTAAAGAAGTCCAT 780883601 361161 NM_000028.2(AGL):c.3836+1G>A AGL Jun 02, 2015 MedGen:C0017922,OMIM:232400,Orphanet:ORPHA308684,SNOMED CT:66937008 Glycogen storage disease type III germline 1 99910848 TAGAAACAGAGGAATCCCAGCCACACCAAGGTAGTGTAAATGTTATAATGCTGTGTAATTA 886042354 266475 NM_001848.2(COL6A1):c.931-1G>A COL6A1 Aug 25, 2015 MedGen:CN029274,OMIM:158810;MedGen:CN033863,OMIM:254090 Bethlem myopathy 1;Ullrich congenital muscular dystrophy 1 germline 21 45990257 ACCCCCTCACACCCGCTTCCTGTCTCCGCAGGGCTCCAGGGGACCCAAGGGCTACAAGGTG 397515322 48373 NM_001382.3(DPAGT1):c.161+5G>A DPAGT1 Nov 08, 2012 MedGen:C2931004,OMIM:608093,Orphanet:ORPHA86309 Congenital disorder of glycosylation type 1J germline 11 119101490 CTCAACAAAACCAGCCGACAGCAGATGTGAGCAGCGGCACACGGGTCCGGGCAGGGGGCAA 587779593 107053 NM_000090.3(COL3A1):c.836G>A (p.Gly279Asp) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188991041 ATGGACGAAATGGAGAAAAGGGTGAAACAGGTGCTCCTGGATTAAAGGTAAATCACAACAA 587780586 139369 NM_014191.3(SCN8A):c.2549G>A (p.Arg850Gln) SCN8A Feb 24, 2017 MedGen:C3281191,OMIM:614558;MedGen:CN517202 Early infantile epileptic encephalopathy 13;not provided de novo;germline 12 51765675 TTTGTTTGGGTTTTTTTTTTCCTTAGCTCCGAGTCTTCAAATTGGCCAAATCCTGGCCCAC 779326570 247468 NM_003394.3(WNT10B):c.632G>A (p.Arg211Gln) WNT10B Aug 16, 2016 MedGen:C4310730,OMIM:617073 Tooth agenesis, selective, 8 germline 12 48968025 ATGACATGGACTTTGGAGAGAAGTTCTCTCGGGATTTCTTGGATTCCAGGGAAGCTCCCCG 137853250 25912 NM_000284.3(PDHA1):c.1133G>A (p.Arg378His) PDHA1 Jan 01, 1991 MedGen:C1839413,OMIM:312170,Orphanet:ORPHA79243 Pyruvate dehydrogenase E1-alpha deficiency germline X 19359613 TCTACTCCAGCGACCCACCTTTTGAAGTTCGTGGTGCCAATCAGTGGATCAAGTTTAAGTC 121964907 15261 NM_000027.3(AGA):c.179G>A (p.Gly60Asp) AGA Dec 15, 1991 Human Phenotype Ontology:HP:0012068,MedGen:C0268225,OMIM:208400 Aspartylglucosaminuria germline 4 177440375 GAGGCTCTGCCCTGGATGCAGTGGAGAGCGGCTGTGCCATGTGTGAGAGAGAGCAGTGTGA 180177231 200505 NM_000030.2(AGXT):c.518G>A (p.Cys173Tyr) AGXT Nov 27, 2014 MedGen:C0268164,OMIM:259900,Orphanet:ORPHA93598,SNOMED CT:65520001 Primary hyperoxaluria, type I germline 2 240871443 TGCAGCCCCTTGATGGCTTCGGGGAACTCTGCCACAGGTGAGCCTGGCCCCAGGGCGGTGG 80224560 47062 NM_000492.3(CFTR):c.2657+5G>A CFTR Jul 28, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008;MedGen:C0238339,OMIM:167800,Orphanet:ORPHA676,SNOMED CT:68072000;MedGen:CN517202;MedGen:CN169374 Cystic fibrosis;Hereditary pancreatitis;not provided;not specified germline;unknown 7 117602868 TTGGTTGTGCTGTGGCTCCTTGGAAAGTGAGTATTCCATGTCCTATTGTGTAGATTGTGTT 794728366 197291 NM_000238.3(KCNH2):c.1193G>A (p.Trp398Ter) KCNH2 Jan 13, 2016 MedGen:CN517202 not provided germline 7 150952789 ACAAGCTGCAGGCACCGCGCATCCACCGCTGGACCATCCTGCATTACAGCCCCTTCAAGGC 137852639 24299 NM_001166107.1(HMGCS2):c.1373G>A (p.Arg458His) HMGCS2 Jul 01, 2001 MedGen:C2751532,OMIM:605911,Orphanet:ORPHA35701 mitochondrial 3-hydroxy-3-methylglutaryl-CoA synthase deficiency germline 1 119750830 GGTACCTGGAGCGAGTGGACGAGCAGCATCGCCGAAAGTATGCCCGGCGTCCCGTCTAAAG 201102492 181268 NM_000527.4(LDLR):c.1784G>A (p.Arg595Gln) LDLR Nov 05, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000;MedGen:CN517202 Familial hypercholesterolemia;not provided germline;not applicable;unknown 19 11116937 TCTCAAGCATCGATGTCAACGGGGGCAACCGGAAGACCATCTTGGAGGATGAAAAGAGGCT 1131692180 424232 NM_032354.4(TMEM107):c.274+1G>A TMEM107 Jul 13, 2017 MedGen:CN317534,OMIM:617562 Meckel syndrome 13 germline 17 8175756 CCATGTTCAACAGCACCCAGAGCCTCATCTGTATCCTTTCTGCCTGCCCACCTTTCCCACA 876658235 235666 NM_001042492.2(NF1):c.3941G>A (p.Trp1314Ter) NF1 Jan 16, 2015 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 17 31235988 TATTACGAATTGTGATCACATCCTCTGATTGGCAACATGTTAGCTTTGAAGTGGATCCTAC 655423 48075 NM_001567.3(INPPL1):c.2415+1G>A INPPL1 Feb 04, 2013 MedGen:C0432219,OMIM:258480,Orphanet:ORPHA2746,SNOMED CT:254068007;MedGen:C0432219,OMIM:258480,Orphanet:ORPHA2746,SNOMED CT:254068007 Opsismodysplasia;Opsismodysplasia germline;inherited 11 72234616 GTGCAGTGGTCTTCACGCCAGCTGCCCACGGTGAGGCTGTGGGCAGGGCCCCTGCTTATGG 17089782 214342 NM_006346.3(PIBF1):c.1214G>A (p.Arg405Gln) PIBF1 Nov 09, 2017 MedGen:CN601375,OMIM:617767;Human Phenotype Ontology:HP:0002335,MedGen:C0431399,Orphanet:ORPHA475,SNOMED CT:253175003,SNOMED CT:716997004 JOUBERT SYNDROME 33;Joubert syndrome germline;unknown 13 72835359 TTCGAAATGCCTCTAGGGAAATGTATGAACGAGAAAACAGGTAAAAAAAAAAAAATGCTTG 752034900 187199 NM_001098.2(ACO2):c.1981G>A (p.Gly661Arg) ACO2 Apr 02, 2015 MedGen:C4225384,OMIM:616289 Optic atrophy 9 germline 22 41527315 CAGAAACATGGCATCAGGTGGGTGGTGATCGGAGACGAGAACTACGGCGAGGGCTCGAGCC 137852749 23845 NM_001204.6(BMPR2):c.1472G>A (p.Arg491Gln) BMPR2 Oct 24, 2016 MedGen:C0152171,OMIM:178600,SNOMED CT:26174007;MedGen:CN169374 Primary pulmonary hypertension;not specified germline 2 202552774 AAGACTGTTGGGACCAGGATGCAGAGGCTCGGCTTACTGCACAGTGTGCTGAGGAAAGGAT 886044406 274507 NM_004006.2(DMD):c.3413G>A (p.Trp1138Ter) DMD Aug 25, 2016 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009 Becker muscular dystrophy germline X 32463458 AGACAGAACTCAAAGAACTTAACACTCAGTGGGATCACATGTGCCAACAGGTATAGACAAT 121909622 31429 NM_005141.4(FGB):c.1289G>A (p.Gly430Asp) FGB Feb 15, 2000 MedGen:C2584774,OMIM:202400,Orphanet:ORPHA98880 Afibrinogenemia, congenital germline 4 154570463 CCAGAAAACAGTGTTCTAAAGAAGACGGTGGTGGATGGTGGTATAATAGATGTCATGCAGC 387906592 38552 NM_001613.2(ACTA2):c.536G>A (p.Arg179His) ACTA2 Mar 16, 2017 MedGen:C2673186,OMIM:611788;MedGen:C0009782;MedGen:C3279690,OMIM:614042;MedGen:C3151201,OMIM:613834,Orphanet:ORPHA404463;MedGen:CN118826,Orphanet:ORPHA91387;MedGen:CN239849;MedGen:CN517202 Aortic aneurysm, familial thoracic 6;Connective tissue disorder;Moyamoya disease 5;Multisystemic smooth muscle dysfunction syndrome;Thoracic aortic aneurysm and aortic dissection;alterations of great arteries and veins;not provided germline;unknown 10 88941309 AGGGCTATGCCTTGCCCCATGCCATCATGCGTCTGGATCTGGCTGGCCGAGATCTCACTGA 137852726 18646 NM_024757.4(EHMT1):c.3218G>A (p.Cys1073Tyr) EHMT1 Oct 05, 2010 MedGen:C0795833,OMIM:610253,Orphanet:ORPHA261494 Chromosome 9q deletion syndrome germline 9 137814468 TGTGCATCGACGACTGCTCCTCCAGCAACTGCATGTGCGGCCAGCTCAGCATGCGCTGCTG 387907371 26814 NM_001110556.1(FLNA):c.5217G>A (p.Thr1739=) FLNA May 02, 2013 Gene:54114,MedGen:C1846129,OMIM:300244,Orphanet:ORPHA88630 Terminal osseous dysplasia germline X 154354825 GCACGTGCCCAACAGCCCCTTCCAAGTGACGGTGAGGAGGGGTGGGGGGTAGGTCAGCAGG 267607477 39676 NM_175053.3(KRT74):c.1444G>A (p.Asp482Asn) KRT74 Apr 01, 2011 MedGen:C3151432,OMIM:613981;MedGen:CN517202 Hypotrichosis 3;not provided germline 12 52567115 AGCTACCACCACCCCAGCTCTGCGGGTGTTGACCTTGGGGCCAGCGCTGTGGCAGGCAGCT 72648356 32368 NM_000088.3(COL1A1):c.1598G>A (p.Gly533Asp) COL1A1 Oct 01, 1994 MedGen:C0268360,OMIM:166210,SNOMED CT:86470003 Osteogenesis imperfecta, recessive perinatal lethal unknown 17 50194365 CTGGTGAAGCTGGTCGTCCCGGTGAAGCTGGTCTGCCTGGTGCCAAGGTGAGGCCCCAGGC -1 445810 NM_000088.3(COL1A1):c.3046G>A (p.Gly1016Arg) COL1A1 Oct 30, 2017 MedGen:CN517202 not provided germline 17 50188795 ACTCTCACTTCTCTCTCTCTCTCTCTGCAGGGGGCTCCTGGTGCCGAAGGTTCCCCTGGAC 886039328 259772 NM_000094.3(COL7A1):c.7442G>A (p.Gly2481Asp) COL7A1 Mar 06, 2017 MedGen:CN517202 not provided germline 3 48570177 GAGTCAATGAACCTAATGTCACCATCCAGGGTGAAGATGGCCGCCCCGGCCAGGAGGGACC 762417023 425024 NM_000527.4(LDLR):c.67+1G>A LDLR Mar 01, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11089616 CCTTGCTCCTCGCCGCGGCGGGGACTGCAGGTAAGGCTTGCTCCAGGCGCCAGAATAGGTT 1064793984 407531 NM_003165.3(STXBP1):c.84G>A (p.Trp28Ter) STXBP1 Aug 18, 2015 MedGen:CN517202 not provided germline 9 127651649 GATAAAGAAGGTCAAGAAGAAGGGGGAATGGAAGGTGAGTAGAAAGTACAGTTAATGGGCT 869025179 20915 NM_004836.6(EIF2AK3):c.2985+1G>A EIF2AK3 Sep 01, 2003 MedGen:C0432217,OMIM:226980,Orphanet:ORPHA1667,SNOMED CT:254066006 Wolcott-Rallison dysplasia germline 2 88570873 GGGACCAAACTGTATATGAGCCCAGAGCAGGTGAGTTTTTCAGACCTTTACTTACTAGCAC 104893712 23389 NM_000388.3(CASR):c.1810G>A (p.Glu604Lys) CASR Mar 29, 2017 MedGen:C0342345,OMIM:601198;MedGen:CN517202 Hypocalcemia, autosomal dominant 1;not provided germline 3 122283764 AACCACACCTCCTGCATTGCCAAGGAGATCGAGTTTCTGTCGTGGACGGAGCCCTTTGGGA 192366176 439906 NM_000441.1(SLC26A4):c.1707+5G>A SLC26A4 Jul 01, 2017 Human Phenotype Ontology:HP:0011387,MedGen:C1863752,OMIM:600791 Enlarged vestibular aqueduct germline 7 107700180 GTTTTAAAAAATGTATCAAGTCCACAGTAAGTATTTTATCCCTAGAAATTTGTTTTCTAAC 137853044 22110 NM_006009.3(TUBA1A):c.1205G>A (p.Arg402His) TUBA1A Dec 04, 2015 MedGen:C1969029,OMIM:611603,Orphanet:ORPHA102011 Lissencephaly 3 germline 12 49185161 ACCACAAGTTTGACCTGATGTATGCCAAACGTGCCTTTGTTCACTGGTACGTTGGGGAGGG 397514343 46851 NM_000060.4(BTD):c.236G>A (p.Arg79His) BTD Dec 04, 2012 MedGen:C0220754,OMIM:253260,Orphanet:ORPHA79241,SNOMED CT:8808004;MedGen:C0220754,OMIM:253260,Orphanet:ORPHA79241,SNOMED CT:8808004 Biotinidase deficiency;Biotinidase deficiency not provided 3 15635615 TGAGTCTGAACCCTCTGGCTCTCATCAGCCGCCAAGAGGCCTTGGAGCTCATGAACCAGAA 721048 16403 NM_001142615.2(EHBP1):c.1185+30064G>A EHBP1 Mar 01, 2008 MedGen:C2678479,OMIM:611868 Prostate cancer, hereditary, 12 germline 2 62904596 GAACCCCTGAGGATTATCAAGGTCCCTTGGGGAATAAGGACCTCAGTGTGGAACAGGAGCC 879253807 214886 NM_000282.3(PCCA):c.184-1G>A PCCA Jan 01, 2012 Human Phenotype Ontology:HP:0003353,MedGen:C0268579,OMIM:606054,Orphanet:ORPHA35 Propionic acidemia germline 13 100111840 TTTCTAATGAATGTGTTTTTTCTCTCTTCAGACTTTTGATAAAATTCTTGTTGCTAATAGA 886039689 259886 NM_000089.3(COL1A2):c.2567G>A (p.Gly856Glu) COL1A2 Jul 25, 2016 MedGen:CN517202 not provided germline 7 94424337 ATAATACTCAGTATTTTTTCTCTATTTAGGGACCTCCTGGCACTCCAGGTCCTCAGGGTCT 786203451 410126 NM_032043.2(BRIP1):c.2493-1G>A BRIP1 Nov 07, 2014 MedGen:CN517202 not provided germline 17 61693513 AATTATTTGACTTTTTCCCTATTTTTTCTAGATGTATTAGACACAGAAATGATTGGGGAGC 786204841 187221 NM_012130.3(CLDN14):c.694G>A (p.Gly232Arg) CLDN14 Feb 01, 2012 MedGen:C3279660,OMIM:614035 Deafness, autosomal recessive 29 germline 21 36461002 GCCCCCTCAGTGACCTCGGCCACGCACAGCGGGTACAGGCTGAACGACTACGTGTGAGTCC 121913503 362866 NM_001289910.1(IDH2):c.359G>A (p.Arg120Lys) IDH2 Feb 16, 2018 Human Phenotype Ontology:HP:0004808,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:ORPHA519,SNOMED CT:17788007;Human Phenotype Ontology:HP:0010796,MedGen:C0677865;MeSH:D015179,MedGen:CN236642;MedGen:C2239176,OMIM:114550,Orphanet:ORPHA88673,SNOMED CT:187769009,SNOMED CT:25370001;MeSH:D009190,MedGen:C0026986,OMIM:614286;Human Phenotype Ontology:HP:0030692,MeSH:D001932,MedGen:C0006118,SNOMED CT:126952004 Acute myeloid leukemia;Brainstem glioma;Colorectal Neoplasms;Hepatocellular carcinoma;Myelodysplastic syndrome;Neoplasm of brain somatic 15 90088606 CTGGCTGGACCAAGCCCATCACCATTGGCAGGCACGCCCATGGCGACCAGGTAGGCCAGGG 104893657 28823 NM_013953.3(PAX8):c.92G>A (p.Arg31His) PAX8 May 01, 1998 Human Phenotype Ontology:HP:0008188,MedGen:C1563716,OMIM:218700 Thyroid agenesis germline 2 113246853 TGAATGGCAGACCTCTGCCGGAAGTGGTCCGCCAGCGCATCGTAGACCTGGCCCACCAGGG 104886228 35971 NM_000495.4(COL4A5):c.3427G>A (p.Gly1143Ser) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108665560 AAAGGTATTAGTGGCCCTCCTGGGAACCCCGGCCTTCCAGGAGAACCTGGTCCTGTAGGTA 771672410 199303 NM_001256850.1(TTN):c.43383G>A (p.Trp14461Ter) TTN Jun 23, 2014 MedGen:CN517202 not provided germline 2 178616485 TGAAAAACGAGAAGTCAGCCGGAAAACATGGACTAAAGTGAGTTTTGAGCAGCACTGCATC 122453115 26739 NM_005629.3(SLC6A8):c.259G>A (p.Gly87Arg) SLC6A8 Jul 01, 2004 MedGen:C1845862,OMIM:300352,Orphanet:ORPHA52503 Creatine deficiency, X-linked germline X 153688833 CGCTTCCCCTACCTGTGCTACAAGAACGGCGGAGGTGAGTTCCCCCGCCCGCCGCGGCCTC 121913009 31852 NM_001943.4(DSG2):c.1520G>A (p.Cys507Tyr) DSG2 Jul 01, 2006 MedGen:C1857777,OMIM:610193 Arrhythmogenic right ventricular cardiomyopathy, type 10 germline 18 31536298 CCACACTGATAGAGCCTGTGCAGACAATCTGTCACGATGCAGAGTATGTGAATGTTACTGC 786204392 186425 NM_004572.3(PKP2):c.1170+1G>A PKP2 Jan 18, 2016 MedGen:C0349788,Orphanet:ORPHA247,SNOMED CT:253528005,SNOMED CT:281170005;MedGen:C1836906,OMIM:609040 Arrhythmogenic right ventricular cardiomyopathy;Arrhythmogenic right ventricular cardiomyopathy, type 9 germline 12 32868926 TGCTTCCAGAAATCTGAAGCTCGGAAGAGGGTGAGTGTCATCTTCAGTCCATTGCAAAGCG 104886130 35782 NM_000495.4(COL4A5):c.1736G>A (p.Gly579Glu) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108597525 CAGGGCTTCCTGGTTTACCTGGCACTCCTGGACAGGATGGATTGCCAGGGCTTCCTGGCCC 28999970 27583 NM_001128177.1(THRB):c.1034G>A (p.Gly345Asp) THRB May 01, 1994 na Thyroid hormone resistance, generalized germline 3 24127609 CAGTGACACGGGGCCAGCTGAAAAATGGGGGTCTTGGGGTGGTGTCAGACGCCATCTTTGA 1060503328 394398 NM_000038.5(APC):c.471G>A (p.Trp157Ter) APC Jun 14, 2016 MedGen:C2713442,OMIM:175100;MedGen:CN517202 Familial adenomatous polyposis 1;not provided germline;unknown 5 112775677 TCTTGACAAAGAAGAAAAGGAAAAAGACTGGTATTACGCTCAACTTCAGAATCTCACTAAA 1057517364 357341 NM_000128.3(F11):c.326-1G>A F11 Oct 14, 2016 MedGen:C0015523,OMIM:612416,Orphanet:ORPHA329,SNOMED CT:49762007 Hereditary factor XI deficiency disease unknown 4 186274115 AGGTACTCATGTCTTCTGCTTTTATTTCCAGCTTGCAACAAAGACATTTATGTGGACCTAG 749704755 424648 NM_152778.2(MFSD8):c.416G>A (p.Arg139His) MFSD8 Jan 06, 2017 MedGen:C1838571,OMIM:610951,Orphanet:ORPHA228366 Ceroid lipofuscinosis neuronal 7 paternal 4 127943775 CTCATAATAAATACTACATGCTGGTTGCTCGTGGATTGTTGGGAATTGGAGCAGGTAAGGT 137853238 29970 NM_000545.6(HNF1A):c.815G>A (p.Arg272His) HNF1A Apr 26, 2017 MedGen:C2675866,OMIM:612520;MedGen:CN240909;MedGen:CN517202 Diabetes mellitus, insulin-dependent, 20;Monogenic diabetes;not provided germline 12 120994265 TGCGTGTCTACAACTGGTTTGCCAACCGGCGCAAAGAAGAAGCCTTCCGGCACAAGCTGGC 281865031 17807 NM_024312.4(GNPTAB):c.2715+1G>A GNPTAB May 10, 2012 MedGen:C0033788,OMIM:252600,Orphanet:ORPHA423461,SNOMED CT:65764006 Pseudo-Hurler polydystrophy germline 12 101764201 AAAAAAAAGTATTTCCAAGATCTTCTCGACGTAAGTAACATCCAGCCTCATTCTTTCTCAT 727504295 49143 NM_005633.3(SOS1):c.1322G>A (p.Cys441Tyr) SOS1 Aug 11, 2017 MeSH:D009634,MedGen:C0028326,Orphanet:ORPHA648,SNOMED CT:205824006;MedGen:CN166718,Orphanet:ORPHA98733;MedGen:CN517202 Noonan syndrome;Rasopathy;not provided germline 2 39023106 GTTGGGAGGGAAAAGACATTGGACAGTGTTGTAATGAATTTATAATGGAAGGAACTCTTAC 886042581 267470 NM_001130987.1(DYSF):c.5174+1G>A DYSF Sep 04, 2015 MedGen:C1850889,OMIM:253601,Orphanet:ORPHA268 Limb-girdle muscular dystrophy, type 2B germline 2 71664439 TCGCTGTGGACTCCCACAGACCTACTGTGTGTACGTGGATGGGGGCTGGCTGCCTGCTTCT 104886075 35652 NM_000495.4(COL4A5):c.655G>A (p.Gly219Ser) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108578087 AATGGAAACTTCTCTCTCCAGGGGAATATGGGCTTAAATTTCCAGGGACCCAAAGGTGAAA 1064794069 411443 NM_000044.4(AR):c.2450-1G>A AR Aug 14, 2015 MedGen:CN517202 not provided germline X 67722826 CCCTCCCCATTCTGTCTTCATCCCACATCAGTTCCAGTGGATGGGCTGAAAAATCAAAAAT 368841777 425392 NM_022336.3(EDAR):c.442+1G>A EDAR Jun 16, 2017 MedGen:CN517202 not provided germline 2 108923367 GCCTCCTGGCACCCCCCAACACCAAGGAATGTGAGTGTCTTTGTCCTTCCACCAGCACGGT 864622161 222572 NM_000267.3(NF1):c.1185+1G>A NF1 Nov 08, 2016 MedGen:C0027831,OMIM:162200,Orphanet:ORPHA636,SNOMED CT:92824003 Neurofibromatosis, type 1 germline 17 31201160 ATAAGCCCTCACAACAACCAACACTTTAAGGTGAGAGCATTGGTTTTTATCTAACTATATT 199473384 78481 NM_000891.2(KCNJ2):c.653G>A (p.Arg218Gln) KCNJ2 Jun 22, 2017 MedGen:C1563715,OMIM:170390,Orphanet:ORPHA37553,SNOMED CT:422348008;MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MedGen:CN517202 Andersen Tawil syndrome;Congenital long QT syndrome;not provided germline;unknown 17 70175692 TGTGTTTGATGTGGCGAGTGGGCAATCTTCGGAAAAGCCACTTGGTGGAAGCTCATGTTCG 587779432 106864 NM_000090.3(COL3A1):c.2780G>A (p.Gly927Asp) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189004100 CTGGAGTGTCTGGACCAAAAGGTGATGCTGGCCAACCAGGAGAGAAGGGATCGCCTGGTGC 80356508 21444 NM_001457.3(FLNB):c.679G>A (p.Glu227Lys) FLNB Oct 09, 2008 MedGen:C0175778,SNOMED CT:63387002;MedGen:C1835564,OMIM:150250 Larsen syndrome;Larsen syndrome, dominant type germline 3 58081668 CCTGAAGAAATCATTCACCCGGATGTGGACGAGCACTCAGTTATGACTTACCTGTCCCAGT 104893700 23368 NM_000388.3(CASR):c.2009G>A (p.Gly670Glu) CASR Aug 01, 1997 MedGen:C1832615,OMIM:239200,Orphanet:ORPHA417 Neonatal severe hyperparathyroidism germline 3 122283963 GCTGCTTCTCCAGCTCCCTGTTCTTCATCGGGGAGCCCCAGGACTGGACGTGCCGCCTGCG 137854505 24066 NM_178138.5(LHX3):c.672G>A (p.Trp224Ter) LHX3 May 01, 2007 MedGen:C1857330,OMIM:221750 Pituitary hormone deficiency, combined 3 germline 9 136198755 GCTGAAGAAGGACGCCGGCCGGCAGCGCTGGGGGCAGTATTTCCGCAACATGAAGCGCTCC 201958741 178812 NM_000158.3(GBE1):c.1544G>A (p.Arg515His) GBE1 Jul 17, 2017 MedGen:C4017118;MedGen:C1849722,OMIM:263570,Orphanet:ORPHA206583;MedGen:CN517202 Adult polyglucosan body neuropathy;Polyglucosan body disease, adult;not provided germline 3 81577999 TCCTGACTCCTTTTACTCCAGTTATTGATCGTGGAATACAGCTTCATAAAATGATTCGACT 552069173 259747 NM_001298.2(CNGA3):c.1688G>A (p.Arg563His) CNGA3 May 04, 2016 Human Phenotype Ontology:HP:0000478,MedGen:C4316870;MedGen:CN517202 Abnormality of the eye;not provided germline;unknown 2 98396858 TGAACATCAAGGGGAGCAAGTCGGGGAACCGCAGGACGGCCAACATCCGCAGCATTGGCTA 587781295 150525 NM_001128425.1(MUTYH):c.393G>A (p.Trp131Ter) MUTYH Jun 26, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline 1 45333166 TCCTCATGCCAACCCCTTTCCCCCAGTGTGGGTCTCAGAGGTCATGCTGCAGCAGACCCAG 1131691605 421455 NM_000313.3(PROS1):c.1156-1G>A PROS1 Sep 15, 2015 MedGen:CN517202 not provided germline 3 93886504 GTTATTTGGTAATTTTTCTTTTTAATTGTAGGTGTCTGTGGAAGAATTAGAACATAGTATT -1 441794 NM_000548.4(TSC2):c.4990-1G>A TSC2 Nov 09, 2016 MedGen:CN517202 not provided germline 16 2087862 GCGGGGATGACCCTTTCTCTTGTCCGGGCAGGGCCAGTTCAACTTTGTCCACGTGATCGTC 267606615 24696 m.9379G>A MT-CO3 Nov 01, 2002 MedGen:C0268237,OMIM:220110,Orphanet:ORPHA254905,SNOMED CT:67434000 Hepatic failure, early-onset, and neurologic disorder due to cytochrome C oxidase deficiency germline MT 9379 TAACCAACACACTAACCATATACCAATGATGGCGCGATGTAACACGAGAAAGCACATACCA 121908932 21654 NM_004086.2(COCH):c.1625G>A (p.Cys542Tyr) COCH Apr 01, 2008 MedGen:C1832425,OMIM:601369 Deafness, autosomal dominant 9 germline 14 30889763 CAATTGTTTCTGATGTCATCAGAGGCATTTGTAGAGATTTCTTAGAATCCCAGCAATAATG 104895502 16630 NM_001127255.1(NLRP7):c.2078G>A (p.Arg693Gln) NLRP7 Aug 01, 2009 MedGen:C2931618,OMIM:231090,Orphanet:ORPHA254685 Hydatidiform mole germline 19 54938095 AACAAAGCTTCCTGAGTGACTCTTCTGTGCGGATTCTTTGTGACCACGTAACCCGTAGCAC 104894431 21035 NM_014252.3(SLC25A15):c.824G>A (p.Arg275Gln) SLC25A15 May 31, 2012 MedGen:C0268540,OMIM:238970,Orphanet:ORPHA415,SNOMED CT:30287008 Hyperornithinemia-hyperammonemia-homocitrullinuria syndrome germline 13 40809585 TATATTCTGGACTGAAACCTACTATGATTCGAGCATTCCCTGCCAATGGAGCACTCTTTTT 397517979 364778 NM_206933.2(USH2A):c.1227G>A (p.Trp409Ter) USH2A Jun 25, 2017 MedGen:C3151138,OMIM:613809;MedGen:CN517202 Retinitis pigmentosa 39;not provided germline 1 216324269 TCAAAGGAAGAAGGAAAATAGTTTAGATTGGGAGGACTGGCAATATTTTGCCAGGAATTGT 794727123 191547 NM_004006.2(DMD):c.1704+1G>A DMD Oct 12, 2016 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001;MedGen:CN169374 Becker muscular dystrophy;Duchenne muscular dystrophy;not specified germline X 32573744 CTCAAATGGCAACGTCTTACTGAAGAACAGGTGTGTCATGTGTGAGAAACTAGCTGTAAAA 121908090 19320 NM_017838.3(NHP2):c.376G>A (p.Val126Met) NHP2 May 10, 2012 MedGen:C1857144,OMIM:224230;MedGen:C3151441,OMIM:613987 Dyskeratosis congenita autosomal recessive 1;Dyskeratosis congenita, autosomal recessive 2 unknown 5 178149799 GCAGCCGCAGGCTCCAAGCGCCCCACCTGTGTGATAATGGTCAAGCCCCATGAGGAGTACC 863224120 211553 NM_007103.3(NDUFV1):c.617G>A (p.Cys206Tyr) NDUFV1 Aug 12, 2014 MedGen:CN517202 not provided germline 11 67610487 TTGTGGTGCGCGGGGCTGGGGCCTACATCTGTGGAGAGGAGACAGCGCTCATCGAGTCCAT 886039412 260202 NM_000227.4(LAMA3):c.3609+1G>A LAMA3 Apr 14, 2017 MedGen:CN517202 not provided germline 18 23928766 AGTGGCATATTATTAGATCATCAGACATGGGTATGCAGTAGTGCATTAATATCAAACAAGA 747656448 389244 NM_000260.3(MYO7A):c.6487G>A (p.Gly2163Ser) MYO7A Sep 05, 2017 MedGen:C1838701,OMIM:600060;MedGen:CN517202 Deafness, autosomal recessive 2;not provided germline 11 77213908 CCCTTCACCAAGATCTCCAACTGGAGCAGCGGCAACACCTACTTCCACATCACCATTGGGA 1057517693 359176 NM_001098802.2(CEP78):c.499+5G>A CEP78 Jan 27, 2017 MedGen:C4310657,OMIM:617236 Cone-rod dystrophy and hearing loss germline 9 78240369 TCCAATTGGAGATGGAGGTTTAGAAAGTGAGTTTAAATCTCATTTAACTCTTGTCCTATCA 515726145 131945 NM_015474.3(SAMHD1):c.434G>A (p.Arg145Gln) SAMHD1 Mar 13, 2014 MedGen:C2749659,OMIM:612952 Aicardi Goutieres syndrome 5 germline 20 36935104 TCATTGATACACCTCAATTTCAACGTCTTCGATACATCAAACAGCTGGGAGGTGGTTACTA 80356505 47563 NM_001457.3(FLNB):c.4835G>A (p.Gly1612Asp) FLNB Oct 09, 2008 MedGen:CN164251,SNOMED CT:43814000 FLNB-Related Disorders not provided 3 58136142 CTCCTTATCGCATCCGAGCCACACAGACGGGTGATGCCAGCAAGTGCCTGGCCACGGGTGA 180177265 200548 NM_000030.2(AGXT):c.776+1G>A (p.Met259fs) AGXT Nov 27, 2014 MedGen:C0268164,OMIM:259900,Orphanet:ORPHA93598,SNOMED CT:65520001 Primary hyperoxaluria, type I germline 2 240875205 CTTCTGGGGCTGTGACGACCAGCCCAGGATGTGAGGCCTGGCAGGGATGGGAAGGTGGAGG 118203966 16125 NM_176812.4(CHMP4B):c.481G>A (p.Glu161Lys) CHMP4B Sep 01, 2007 MedGen:C1854311,OMIM:605387 Cataract, posterior polar, 3 germline 20 33851064 AAACCTGTAGGGTTTGGAGAAGAGTTTGACGAGGTGAGTAGTTTTGTACAGATCCCATAAG 121912673 33362 NM_005159.4(ACTC1):c.941G>A (p.Arg314His) ACTC1 Jun 30, 2015 MedGen:C3150681,OMIM:613424;MedGen:CN517202 Dilated cardiomyopathy 1R;not provided germline 15 34791163 GCACCACTATGTACCCTGGTATTGCTGATCGTATGCAGAAGGAAATCACTGCTCTGGCTCC 780022652 357230 NM_004543.4(NEB):c.3987+1G>A NEB Jul 29, 2016 MedGen:C1850569,OMIM:256030 Nemaline myopathy 2 unknown 2 151674476 GCCAAGGCATCGAGAAACATTGCCAGTGATGTGAGTACAAATTTTAGGTGAAGTTTAGGTG 137852440 25309 NM_000132.3(F8):c.5305G>A (p.Gly1769Arg) F8 Jan 01, 1995 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154906488 GATGGCTCCTTTACTCAGCCCTTATACCGTGGAGAACTAAATGAACATTTGGGACTCCTGG 878854410 243883 NM_016239.3(MYO15A):c.3944G>A (p.Gly1315Glu) MYO15A Jun 06, 2016 MedGen:C1838263,OMIM:600316 Deafness, autosomal recessive 3 germline 17 18127077 AGCTCACTCTGCCCCTTTGCTCGGTCAGTGGAGAGAGCGGCTCTGGCAAAACTGAGGCCAC 397516698 53435 NM_001927.3(DES):c.735+1G>A DES Jun 23, 2016 MedGen:C1858154,OMIM:604765;MedGen:C1832370,OMIM:601419,Orphanet:ORPHA98909 Dilated cardiomyopathy 1I;Myofibrillar myopathy 1 germline 2 219420347 ATCGCGTTCCTTAAGAAAGTGCATGAAGAGGTATACCTTGGCCCCTCTTCCTGGGGTCACT 1131690826 420620 NM_144997.5(FLCN):c.780G>A (p.Trp260Ter) FLCN Sep 11, 2014 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 17 17221628 AACGCTCATAGCTGGTGCTGTGTTCTCCAGGCTCCTGAAGGCGTGTGGCAGCCGGCTGACC 886039720 259773 NM_000094.3(COL7A1):c.5300G>A (p.Gly1767Glu) COL7A1 Aug 16, 2016 MedGen:CN517202 not provided germline 3 48579376 AGGGGGACCCAGGTGTCCGAGGCCCAGCAGGAGAAAAGGTGAGAGGGTGTGGGGGTTTCTC 398122828 48375 NM_001854.3(COL11A1):c.3816+1G>A COL11A1 Dec 19, 2017 MedGen:C0265235,OMIM:154780,SNOMED CT:33410002;MedGen:CN517202 Marshall syndrome;not provided germline 1 102915630 CCAGGGCCTCCTGGGGAAGCAGGTGTAGGCGTAAGTACTGTGTTATTGTTAACATAGTGTA 767399782 213656 NM_006087.3(TUBB4A):c.763G>A (p.Val255Ile) TUBB4A Aug 07, 2017 MedGen:C2676244,OMIM:612438,Orphanet:ORPHA139441;MedGen:CN517202 Leukodystrophy, hypomyelinating, 6;not provided de novo;germline 19 6495736 CAGCTGAACGCCGACCTGCGCAAGCTGGCCGTCAACATGGTTCCCTTTCCTCGCCTGCACT 104893791 28085 NM_000539.3(RHO):c.448G>A (p.Glu150Lys) RHO Aug 04, 2006 MedGen:C4016366 Retinitis pigmentosa 4, autosomal recessive germline 3 129530962 TGTAAGCCCATGAGCAACTTCCGCTTCGGGGAGAACCATGCCATCATGGGCGTTGCCTTCA 587776985 65661 NM_001349.3(DARS):c.1379G>A (p.Arg460His) DARS May 02, 2013 MedGen:C3809008,OMIM:615281,Orphanet:ORPHA363412 Hypomyelination with brainstem and spinal cord involvement and leg spasticity germline 2 135911174 AGAAAATTAAGGCTTACATTGATTCCTTCCGCTTTGGAGCCCCTCCTCATGCTGGTGGAGG 58762773 29662 NM_000526.4(KRT14):c.1264G>A (p.Glu422Lys) KRT14 Apr 01, 2000 MedGen:C0079295,OMIM:131760,Orphanet:ORPHA79396;MedGen:CN517202 Epidermolysis bullosa herpetiformis, Dowling-Meara;not provided germline 17 41583245 ATCGCCACCTACCGCCGCCTGCTGGAGGGCGAGGACGCCCAGTGAGTCTTGGCCCTCCCCT 863223901 212034 NM_000032.4(ALAS2):c.606G>A (p.Met202Ile) ALAS2 Jun 23, 2014 MedGen:CN517202 not provided germline X 55021084 CGTCTGGTGTAGTAATGATTACCTGGGCATGAGCCGACACCCTCAGGTCTTGCAAGCCACA 59301204 57262 NM_170707.3(LMNA):c.992G>A (p.Arg331Gln) LMNA Jul 28, 2017 EFO:EFO_0000407,Human Phenotype Ontology:HP:0001644,MedGen:C0007193,Orphanet:ORPHA217604,SNOMED CT:195021004;MedGen:CN517202 Primary dilated cardiomyopathy;not provided germline 1 156135956 GAGACCTGGAGGACTCACTGGCCCGTGAGCGGGACACCAGCCGGCGGCTGCTGGCGGAAAA 587776401 36043 NM_000495.4(COL4A5):c.4069+1G>A COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108680957 AGGGGGAACCGGGACTTATTGGTCCTCCAGGTAAGACTTATTCCTGAAGATAGTTATACCT 587781255 143198 NM_000314.6(PTEN):c.379G>A (p.Gly127Arg) PTEN Nov 08, 2016 MedGen:C1959582,OMIM:601728,Orphanet:ORPHA306498;MedGen:CN517202 PTEN hamartoma tumor syndrome;not provided germline 10 87933138 AATCATGTTGCAGCAATTCACTGTAAAGCTGGAAAGGGACGAACTGGTGTAATGATATGTG 201552310 27195 NM_000500.7(CYP21A2):c.874G>A (p.Gly292Ser) CYP21A2 Aug 01, 1992 MedGen:C0852654,OMIM:201910 21-hydroxylase deficiency germline 6 32040140 GTGCACATGGCTGCAGTGGACCTCCTGATCGGTGGCACTGAGACCACAGCAAACACCCTCT 121909802 22787 NM_001017535.1(VDR):c.985G>A (p.Glu329Lys) VDR Sep 01, 2001 MedGen:C0268690,OMIM:277440,SNOMED CT:72831007 Vitamin D-dependent rickets, type 2 germline 12 47846374 GGACTGAAGAAGCTGAACTTGCATGAGGAGGAGCATGTCCTGCTCATGGCCATCTGCATCG 386134139 51305 NM_000096.3(CP):c.1865-1G>A CP Apr 18, 2013 MedGen:C0878682,OMIM:604290,Orphanet:ORPHA48818,SNOMED CT:124224004 Deficiency of ferroxidase not provided 3 149186733 CTTCCAAAATGTTATTTCCCAACTTTTACAGCCATGAATGGATTCATGTATGGGAATCAGC 80338703 33995 NM_000303.2(PMM2):c.415G>A (p.Glu139Lys) PMM2 Feb 07, 2017 MedGen:C0349653,OMIM:212065,Orphanet:ORPHA79318,SNOMED CT:277893002;MedGen:CN517202 Carbohydrate-deficient glycoprotein syndrome type I;not provided germline 16 8811146 GTGTCCCCTATTGGAAGAAGCTGCAGCCAAGAAGAACGCATTGAGTTCTACGAACTCGATA 112118237 197595 NM_000138.4(FBN1):c.7775G>A (p.Cys2592Tyr) FBN1 Jan 15, 2013 MedGen:CN517202 not provided germline 15 48420731 AGAACATCATTGGGGGCTACAGGTGCAGCTGCCCCCAGGGCTACCTCCAGCACTACCAGTG -1 426791 NM_001171.5(ABCC6):c.4324G>A (p.Ala1442Thr) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16150657 GTGGACCCTGGCACGGAGCTGCAGATGCAGGCCATGCTCGGGAGCTGGTTTGCACAGTGCA 138269726 48494 NM_004525.2(LRP2):c.6160G>A (p.Asp2054Asn) LRP2 Feb 13, 2013 MedGen:C1857277,OMIM:222448,Orphanet:ORPHA2143 Donnai Barrow syndrome germline 2 169212088 GCCTGTGCCACTGGATTTAAACTCAATCCTGATAATCGGTCCTGCTCTCCATATAACTCTT 267607144 20039 NM_021625.4(TRPV4):c.806G>A (p.Arg269His) TRPV4 Feb 13, 2017 MedGen:C0007959,Orphanet:ORPHA166,SNOMED CT:50548001;MedGen:C2079540,OMIM:606071;Gene:8094,MedGen:C1838492,OMIM:600175,Orphanet:ORPHA1216;MedGen:C0027868,Orphanet:ORPHA68381;MedGen:CN517202 Charcot-Marie-Tooth disease;Charcot-Marie-Tooth disease type 2C;Distal spinal muscular atrophy, congenital nonprogressive;Neuromuscular Diseases;not provided germline;unknown 12 109800665 CCCAGGGAGCTGATGTCCACGCCCAGGCCCGTGGGCGCTTCTTCCAGCCCAAGGATGAGGG 587777460 143131 NM_003072.3(SMARCA4):c.3533G>A (p.Trp1178Ter) SMARCA4 Sep 01, 2013 MedGen:C2750074,OMIM:613325 Rhabdoid tumor predisposition syndrome 2 unknown 19 11030880 CAGACACTGTGATCATTTTTGACAGCGACTGGAATCCTCACCAGGTAAAAGCGGGCCGGGC -1 470545 NM_000033.3(ABCD1):c.311G>A (p.Arg104His) ABCD1 Mar 09, 2017 MedGen:C0162309,OMIM:300100,Orphanet:ORPHA43,SNOMED CT:65389002 Adrenoleukodystrophy germline X 153725577 TGGCCCTGCACTCGGCCGCCTTGGTGAGCCGCACCTTCCTGTCGGTGTATGTGGCCCGCCT 794728213 197827 NM_000138.4(FBN1):c.164+1G>A FBN1 Sep 02, 2016 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:CN517202 Marfan syndrome;not provided germline 15 48644605 AGGCGGTGGAGGACACGACGCGCTTAAAGGGTAAAGGAACCGGTTCCCTCCTTTGGTGTGG 281865144 132455 NM_001127464.2(ZNF469):c.337G>A (p.Glu113Lys) ZNF469 - MedGen:C1835677,OMIM:148300 Keratoconus 1 germline 16 88427807 CAGGCTCCCTCAAGGCTGGCGGGCAGGGCAGAGGGCAGCCCCCCACAGCGCTACATTCTGG 121918017 28708 NM_000478.5(ALPL):c.892G>A (p.Glu298Lys) ALPL Sep 01, 1994 Human Phenotype Ontology:HP:0003239,MedGen:C0268412,OMIM:241500,Orphanet:ORPHA247651,SNOMED CT:55236002 Infantile hypophosphatasia germline 1 21573694 GGTCTCTTCGAGCCAGGGGACATGCAGTACGAGCTGAACAGGAACAACGTGACGGACCCGT 431905521 102955 NM_014714.3(IFT140):c.874G>A (p.Val292Met) IFT140 Jun 01, 2017 MedGen:C0265275,Orphanet:ORPHA474,SNOMED CT:75049004;MedGen:C1849437,OMIM:266920,Orphanet:ORPHA140969 Jeune thoracic dystrophy;Renal dysplasia, retinal pigmentary dystrophy, cerebellar ataxia and skeletal dysplasia germline;maternal 16 1587961 GACATCGCTTTGATTGAAGGCAGCCTTCTCGTGATGGCCGTCGGGGAGGCTGCCCTCAGGT 72656387 44621 NM_000089.3(COL1A2):c.838G>A (p.Gly280Ser) COL1A2 Nov 17, 2014 MeSH:D010013,MedGen:C0029434,Orphanet:ORPHA666,SNOMED CT:78314001;MedGen:CN517202 Osteogenesis imperfecta;not provided germline 7 94409367 GTTGGTAACGCTGGTCCTGCTGGTCCCGCCGGTCCCCGTGGTGAAGTGGGTCTTCCAGGCC 775557680 193443 NM_000539.3(RHO):c.541G>A (p.Glu181Lys) RHO Jan 01, 2015 Human Phenotype Ontology:HP:0000547,MeSH:D012174,MedGen:C0035334,OMIM:268000,Orphanet:ORPHA791,SNOMED CT:28835009;MedGen:C3151001,OMIM:613731 Retinitis pigmentosa;Retinitis pigmentosa 4 germline;unknown 3 129532261 CCCTACCTGCCTGTCCTCAGGTACATCCCCGAGGGCCTGCAGTGCTCGTGTGGAATCGACT 727504893 172924 NM_206933.2(USH2A):c.632G>A (p.Trp211Ter) USH2A Dec 23, 2013 MedGen:C1848634,OMIM:276901 Usher syndrome, type 2A germline 1 216418533 TGACACTGGGGAGAATTCTTGTGAAGAAATGGATTCATCTTAGTGTGCAGGTGAGTAAAAT 587784264 169351 NM_000430.3(PAFAH1B1):c.399+1G>A PAFAH1B1 Feb 08, 2013 MedGen:C1843916,OMIM:607432 Lissencephaly 1 germline 17 2667199 GTCTCTGCTTCAGAGGATGCTACAATTAAGGTAATTTTTTGTTAAAAGCAGACTTAACGGG 1085307124 413892 NM_030916.2(NECTIN4):c.724G>A (p.Val242Met) NECTIN4 Jan 24, 2018 MedGen:C3150807,OMIM:613573,Orphanet:ORPHA247820 Ectodermal dysplasia-syndactyly syndrome 1 germline 1 161077459 CAGGACCAAAGGATCACCCACATCCTCCACGTGTCCTGTAAGTACTTGGATGCTTGGGTAG 786205153 187688 NM_002334.3(LRP4):c.3697G>A (p.Glu1233Lys) LRP4 Apr 27, 2015 MedGen:C4225377,OMIM:616304 Myasthenic syndrome, congenital, 17 germline 11 46875806 TCCCAACTGCTATGGGCCGATGCCCACACCGAGGTGAGAGCCGTGTCCCTGCTGCTTCCCA 104894011 441101 NM_000162.4(GCK):c.793G>A (p.Glu265Lys) GCK Jan 11, 2017 MedGen:CN517202 not provided germline 7 44147720 ACCGAGTGGGGCGCCTTCGGGGACTCCGGCGAGCTGGACGAGTTCCTGCTGGAGTATGACC 387907082 39992 NM_001083961.1(WDR62):c.1313G>A (p.Arg438His) WDR62 Nov 01, 2010 MedGen:C1858535,OMIM:604317 Primary autosomal recessive microcephaly 2 germline 19 36081512 TTCTGACTTGTTCTTCAGACAACACCATTCGCTTCTGGAACTTGGACAGCAGCCCTGATTC 267607509 77381 NM_002055.4(GFAP):c.382G>A (p.Asp128Asn) GFAP Jan 08, 2015 MedGen:C0270726,OMIM:203450,Orphanet:ORPHA58,SNOMED CT:81854007;MedGen:CN517202 Alexander's disease;not provided germline 17 44915105 GCTGAGCTGCGAGAGCTGCGGCTGCGGCTCGATCAACTCACCGCCAACAGCGCCCGGCTGG 121908818 451965 NM_017849.3(TMEM127):c.158G>A (p.Trp53Ter) TMEM127 Jul 06, 2017 MedGen:C1708353,Orphanet:ORPHA29072 Hereditary Paraganglioma-Pheochromocytoma Syndromes germline 2 96265224 CGCTGTGCACTGCCCTCGCCGAGCCCGCCTGGTTGCACATCCACGGAGGCACCTGTTCGCG 375817528 227583 NM_001198868.1(CAPN1):c.1605+5G>A CAPN1 May 09, 2016 MedGen:C4310800,OMIM:616907 Spastic paraplegia 76, autosomal recessive germline 11 65206824 AGATCCAGGCCAATCTCCCCGATGAGGTGCGTGGTCCCACCCCACCAGGCCCCGTCCTCCT 1064796460 481496 NM_006009.3(TUBA1A):c.1169G>A (p.Arg390His) TUBA1A Nov 16, 2017 MedGen:C1969029,OMIM:611603,Orphanet:ORPHA102011 Lissencephaly 3 de novo 12 49185197 ACACCACAGCCATTGCTGAGGCCTGGGCTCGCCTGGACCACAAGTTTGACCTGATGTATGC 111033660 46835 NM_000155.3(GALT):c.247G>A (p.Gly83Arg) GALT Dec 04, 2012 MedGen:C0268151,OMIM:230400,Orphanet:ORPHA79239,SNOMED CT:124354006 Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase not provided 9 34647253 CCTCTGTGTCCTGGGGCCATCCGAGCCAACGGAGAGGTAAGCCTGTAGAGCCCTGCATCTG 606231442 170973 NM_152296.4(ATP1A3):c.2600G>A (p.Gly867Asp) ATP1A3 May 04, 2014 MedGen:C3553788,OMIM:614820;MedGen:C1868681,OMIM:128235,Orphanet:ORPHA71517 Alternating hemiplegia of childhood 2;Dystonia 12 de novo 19 41969523 TCTCTTACTTTGTGATCCTGGCAGAAAATGGCTTCTTGCCCGGCAACCTGGTGGGCATCCG 121913023 31826 NM_000400.3(ERCC2):c.2041G>A (p.Asp681Asn) ERCC2 Aug 01, 2001 MedGen:C1853102,OMIM:610756 Cerebrooculofacioskeletal syndrome 2 germline 19 45352511 AAGACGGACTACGGCCTCATGGTCTTTGCCGACAAGGTGCAGCTTCAGGGGTGCCCCTGTG 121913651 29158 NM_000257.3(MYH7):c.1447G>A (p.Glu483Lys) MYH7 Jul 24, 2017 MedGen:C3495498,OMIM:192600;Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569 Familial hypertrophic cardiomyopathy 1;Hypertrophic cardiomyopathy germline 14 23428631 TTTGAGCAGCTCTGCATCAACTTCACCAACGAGAAGCTGCAGCAGTTCTTCAACCACCACA 387907209 40612 NM_020297.3(ABCC9):c.3461G>A (p.Arg1154Gln) ABCC9 Mar 31, 2017 MedGen:C1837839,OMIM:608569;MedGen:C0795905,OMIM:239850,Orphanet:ORPHA1517;MedGen:CN517202 Dilated cardiomyopathy 1O;Hypertrichotic osteochondrodysplasia;not provided germline 12 21842326 TTGCCTTTTATTTTATCCAGAAATACTTTCGGGTTGCCTCTAAGTAAGTAAAACAGCATCC 1057519467 362116 NM_000520.5(HEXA):c.1432G>A (p.Gly478Arg) HEXA Mar 22, 2011 MedGen:C0039373,OMIM:272800,Orphanet:ORPHA845,SNOMED CT:111385000 Tay-Sachs disease germline 15 72345540 ACATGCCCCTTTTCCTCCAGGCCCAGAGCAGGGGCTGTTGCCGAAAGGCTGTGGAGCAACA 587783772 170043 NM_000252.2(MTM1):c.1262G>A (p.Arg421Gln) MTM1 Sep 07, 2017 MedGen:C0410203,OMIM:310400,Orphanet:ORPHA596,SNOMED CT:46804001;MedGen:CN517202 Severe X-linked myotubular myopathy;not provided germline X 150659665 AAACAAATTATCTTCATCAATTTATTCAGCGAATAGGTCATGGTGATAAAAACCACACCGA 587776602 19639 NM_020427.2(SLURP1):c.178+1G>A SLURP1 Apr 01, 2001 MedGen:C0025221,OMIM:248300,Orphanet:ORPHA87503,SNOMED CT:239069005 Acroerythrokeratoderma germline 8 142741802 GCATGACCACGCTGGTGACGGTGGAGGCAGGTGAGGCCAGGCCCCACGGCAGCCCTGGGTG 797044669 192188 NM_000169.2(GLA):c.369+1G>A GLA Apr 01, 2015 Human Phenotype Ontology:HP:0001071,MedGen:C0002986,OMIM:301500,Orphanet:ORPHA324,SNOMED CT:16652001 Fabry disease germline X 101403810 CCTCATGGGATTCGCCAGCTAGCTAATTATGTGAGTTTATAGATAATGTTCTTGTTCATTC 776556963 259237 NM_013448.2(BAZ1A):c.3278G>A (p.Arg1093Gln) BAZ1A - MedGen:CN238521 VATER/VACTERL association with CNS malformations de novo 14 34771534 CACTCTTTCAAATAGAGCAGGGCATTGAGCGGCGTTTTCTGAAAGCTCCACTTGGTAAGTA 397516283 52308 NM_000260.3(MYO7A):c.1200+1G>A MYO7A Aug 17, 2010 MedGen:C1568247,OMIM:276900,Orphanet:ORPHA231169 Usher syndrome, type 1 germline 11 77160283 GCACTGGACGTGCGCGACGCCTTCGTAAAGGTGGGCTGGAGGGAAGGGGCCGCTTGCTCGC -1 439580 NM_182972.2(IRF2BP2):c.1652G>A (p.Ser551Asn) IRF2BP2 Nov 13, 2017 MedGen:CN615280,OMIM:617765 IMMUNODEFICIENCY, COMMON VARIABLE, 14 germline 1 234607249 AGGGAGCTAGTGGAGAGGTCTATTGTCCCAGTGGGGAAAAATGCCCTCTTGTGGGCTCCAA 199474667 24638 m.3249G>A MT-TL1 Jun 11, 2010 MedGen:C0022541,OMIM:530000,Orphanet:ORPHA480 Kearns Sayre syndrome germline MT 3249 GAACAGGGTTTGTTAAGATGGCAGAGCCCGGTAATCGCATAAAACTTAAAACTTTACAGTC 587783130 166513 NM_003159.2(CDKL5):c.73G>A (p.Gly25Arg) CDKL5 Oct 15, 2012 MedGen:CN517202 not provided germline X 18510828 TGTTTACTTCTTTTTATTATAGGAGCCTATGGAGTTGTACTTAAATGCAGACACAAGGCAA 151344631 45847 NM_000218.2(KCNQ1):c.613G>A (p.Val205Met) KCNQ1 Apr 05, 2017 MedGen:CN230736;MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MeSH:D008133,MedGen:C0023976,SNOMED CT:9651007;MedGen:C0035828,OMIM:192500,Orphanet:ORPHA101016,SNOMED CT:20852007;MedGen:CN517202 Cardiovascular phenotype;Congenital long QT syndrome;Long QT syndrome;Long QT syndrome 1;not provided germline 11 2571333 CCCCCTCTCCTGCACTCCACAGACCTCATCGTGGTCGTGGCCTCCATGGTGGTCCTCTGCG 104886229 25497 NM_000495.4(COL4A5):c.3428G>A (p.Gly1143Asp) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive germline X 108665561 AAGGTATTAGTGGCCCTCCTGGGAACCCCGGCCTTCCAGGAGAACCTGGTCCTGTAGGTAA 587779689 107196 NM_000090.3(COL3A1):c.2402G>A (p.Gly801Asp) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189002308 GAGGATATTTTTCTCTTCAGGGTGAGAGAGGTGAAACTGGCCCTCCAGGACCTGCTGGTTT 886041010 263164 NM_006087.3(TUBB4A):c.731G>A (p.Gly244Asp) TUBB4A Jul 05, 2016 MedGen:C2676244,OMIM:612438,Orphanet:ORPHA139441 Leukodystrophy, hypomyelinating, 6 germline 19 6495768 GCGGGGTCACCACCTGCCTGCGCTTCCCGGGCCAGCTGAACGCCGACCTGCGCAAGCTGGC 606231255 167369 NM_001145306.1(CDK6):c.589G>A (p.Ala197Thr) CDK6 Dec 20, 2013 MedGen:C4015156,OMIM:616080 Primary autosomal recessive microcephaly 12 germline 7 92671484 GCACCCGAAGTCTTGCTCCAGTCCAGCTACGCCACCCCCGTGGATCTCTGGAGTGTTGGCT -1 442186 NM_000435.2(NOTCH3):c.164G>A (p.Cys55Tyr) NOTCH3 Jun 14, 2016 MedGen:CN517202 not provided germline 19 15197533 ACGGAAGCCCGTGTGCAAATGGAGGTCGTTGCACCCAGCTGCCCTCCCGGGAGGCTGCCTG 104886177 35854 NM_000495.4(COL4A5):c.2386G>A (p.Gly796Arg) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108606883 CCAGGACGCACTGGCTTAGATGGGCTCCCTGGACCAAAAGGTATGGAGGCTGTCACTGCAT 397508175 67881 NM_000492.3(CFTR):c.1203G>A (p.Trp401Ter) CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline 7 117542102 AGTAGTGATGGAGAATGTAACAGCCTTCTGGGAGGAGGTCAGAATTTTTAAAAAATTGTTT 1060501455 395005 NM_001369.2(DNAH5):c.8465G>A (p.Trp2822Ter) DNAH5 Jun 04, 2016 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244 Ciliary dyskinesia germline 5 13788898 TATACTTTCAACAGGATCTGTTAAAGCTGTGGAAGCATGAGTGTAAACGTGTTATAGCTGA 864321710 217262 NM_172107.3(KCNQ2):c.388G>A (p.Glu130Lys) KCNQ2 - MedGen:C3150986,OMIM:613720,Orphanet:ORPHA439218 Early infantile epileptic encephalopathy 7 de novo 20 63445364 CAAGGTGGCCTCAGCTTTCCTCCCCTGCAGGAAATCGTGACTATCGTGGTGTTTGGCGTGG 267606722 22166 NM_000492.3(CFTR):c.2538G>A (p.Trp846Ter) CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline 7 117594977 TATGGAGAGCATACCAGCAGTGACTACATGGAACACATACCTTCGATATATTACTGTCCAC 121908011 18814 NM_000372.4(TYR):c.1147G>A (p.Asp383Asn) TYR Mar 10, 2015 MedGen:C1847024,OMIM:606952,Orphanet:ORPHA79434;MedGen:C0268494,OMIM:203100,Orphanet:ORPHA79431,SNOMED CT:6483008;MedGen:CN517202 Oculocutaneous albinism type 1B;Tyrosinase-negative oculocutaneous albinism;not provided germline 11 89227933 ACAATGTCCCAGGTACAGGGATCTGCCAACGATCCTATCTTCCTTCTTCACCATGCATTTG 661 33166 NM_000021.3(PSEN1):c.1229G>A (p.Cys410Tyr) PSEN1 Jun 29, 1995 MedGen:C1843013,OMIM:607822;MedGen:CN517202 Alzheimer disease, type 3;not provided germline 14 73217225 CCAGTGGAGACTGGAACACAACCATAGCCTGTTTCGTAGCCATATTAATTGTAAGTATACA 765191836 194512 NM_024592.4(SRD5A3):c.603G>A (p.Trp201Ter) SRD5A3 Nov 19, 2014 MedGen:C3150191,OMIM:612379,Orphanet:ORPHA324737 Congenital disorder of glycosylation type 1Q germline 4 55367628 AGGGAAAAATCTATTGATGCAAGCACGGTGGTTCCATATTCTTGGGATGATGATGTTCATC 77932196 22221 NM_000492.3(CFTR):c.1040G>A (p.Arg347His) CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008;MedGen:CN517202;MedGen:CN169374 Cystic fibrosis;not provided;not specified germline;unknown 7 117540270 TCACCACCATCTCATTCTGCATTGTTCTGCGCATGGCGGTCACTCGGCAATTTCCCTGGGC 1131691700 421765 NM_000264.4(PTCH1):c.2561-1G>A PTCH1 Apr 27, 2017 MedGen:CN517202 not provided germline 9 95461999 ATAATGTGTTACAATCATTTGCCATTTCTAGGACTTCAGGATGCATTTGACAGTGACTGGG 1131692314 424515 NM_000280.4(PAX6):c.794G>A (p.Trp265Ter) PAX6 - MedGen:C0344542,OMIM:106210 Aniridia 1 maternal 11 31793774 AGGTATGGTTTTCTAATCGAAGGGCCAAATGGAGAAGAGAAGAAAAACTGAGGAATCAGAG 762411583 224715 NM_000203.4(IDUA):c.590-7G>A IDUA Feb 11, 2016 MedGen:C0023786,Orphanet:ORPHA579 Mucopolysaccharidosis type I germline 4 1001672 CCAGGGCAGGTGTAGACGCAGTGCTCCCCCGGCCCAGGCTTCCTGAACTACTACGATGCCT 886041695 264990 NM_000444.5(PHEX):c.1080-1G>A PHEX May 11, 2016 MedGen:CN517202 not provided germline X 22111466 ACAATAAATGGGCATCTCTCTCTGTTAACAGGACCATTGCCAACTATTTGGTGTGGAGAAT 192838388 98283 NM_000050.4(ASS1):c.787G>A (p.Val263Met) ASS1 Jun 16, 2017 MedGen:C0175683,OMIM:215700,Orphanet:ORPHA187;MedGen:CN517202 Citrullinemia type I;not provided germline;unknown 9 130480398 ACCAGTTCTTCCCACAGGGGCAAGCATGGCGTGGGCCGTATTGACATCGTGGAGAACCGCT 181195449 39140 NR_023343.1(RNU4ATAC):n.50G>A RNU4ATAC Apr 08, 2011 MedGen:C1859452,OMIM:210710,SNOMED CT:254102008 Osteodysplastic primordial dwarfism, type 1 germline 2 121530929 TTGCGCTACTGTCCAATGAGCGCATAGTGAGGGCAGTACTGCTAACGCCTGAACAACACAC 72658198 457645 NM_000089.3(COL1A2):c.2565+1G>A COL1A2 Jun 27, 2017 MedGen:C0268335,OMIM:130000,Orphanet:ORPHA287,SNOMED CT:20766005,SNOMED CT:83470009;MedGen:C0023931,OMIM:166200,SNOMED CT:385482004 Ehlers-Danlos syndrome, classic type;Osteogenesis imperfecta type I germline 7 94423119 AAGGGTCCCTCTGGAGAGGCTGGTACTGCTGTAAGTGATTTCCAACTCCTCTTTCTTAATA 199473062 78820 NM_198056.2(SCN5A):c.481G>A (p.Glu161Lys) SCN5A Oct 26, 2016 MedGen:C1142166,Orphanet:ORPHA130,SNOMED CT:418818005 Brugada syndrome germline 3 38622401 CACGACCCTCCACCCTGGACCAAGTATGTCGAGTGAGTATCTTCAGGGCCTCTTCTCCACG 149089817 197481 NM_000218.2(KCNQ1):c.1336G>A (p.Asp446Asn) KCNQ1 Oct 24, 2012 MedGen:CN517202 not provided germline 11 2588797 AAGATGCTCACAGTCCCCCATATCACGTGCGACCCCCCAGAAGAGCGGCGGCTGGACCACT 777661576 185762 NM_005957.4(MTHFR):c.1753-18G>A MTHFR - MedGen:C1856058,OMIM:236250 Homocysteinemia due to MTHFR deficiency germline 1 11790916 CTGTGTGTGTGTGCATGTGTGCGTGTGTGCGGGGGTATGTGTGTGTAGGACGAGGCCTTTG 587779688 107195 NM_000090.3(COL3A1):c.636+5G>A (p.Gly195_Ser212del) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188988648 GTGAACCTGGGCAAGCTGGTCCTTCAGTAAGTAACAATTAAATTTATATTTAGTAAGTCGA 104893780 28072 NM_000539.3(RHO):c.544G>A (p.Gly182Ser) RHO Oct 01, 1991 MedGen:C3151001,OMIM:613731 Retinitis pigmentosa 4 germline 3 129532264 TACCTGCCTGTCCTCAGGTACATCCCCGAGGGCCTGCAGTGCTCGTGTGGAATCGACTACT 587776995 70474 NM_001278689.1(EOGT):c.1130G>A (p.Arg377Gln) EOGT Apr 04, 2013 MedGen:C3809092,OMIM:615297 Adams-Oliver syndrome 4 germline 3 68987467 TCACCATTCTTGCACGGAGCACAGAATACCGGAAAATCCTTAACCAAAATGAGGTTAGTTT 1085307159 414086 NM_001204.6(BMPR2):c.77-1G>A (p.A26Efs*9) BMPR2 - MedGen:C0152171,OMIM:178600,SNOMED CT:26174007 Primary pulmonary hypertension germline 2 202464808 ATTTGTCATTCCTTTATTTCCTTTATTTTAGCTTCGCAGAATCAAGAACGGCTATGTGCGT 587779504 106947 NM_000090.3(COL3A1):c.3562G>A (p.Gly1188Arg) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189008960 CCAGGCCACCCAGGGCAACCAGGCCCTCCTGGACCTCCTGGTGCCCCTGGTCCTTGCTGTG 587779234 94745 NM_000179.2(MSH6):c.2330G>A (p.Trp777Ter) MSH6 Sep 05, 2013 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Lynch syndrome germline 2 47800313 CTCCTTTTGGTAAGCGGCTCCTAAAGCAATGGCTTTGTGCCCCACTCTGTAACCATTATGC 137852257 25650 NM_000133.3(F9):c.1069G>A (p.Gly357Arg) F9 Sep 01, 1989 MedGen:C0008533,OMIM:306900,Orphanet:ORPHA98879,SNOMED CT:41788008 Hereditary factor IX deficiency disease germline X 139561754 AAATTTGGATCTGGCTATGTAAGTGGCTGGGGAAGAGTCTTCCACAAAGGGAGATCAGCTT 104886112 35736 NM_000495.4(COL4A5):c.1286G>A (p.Gly429Glu) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108591178 CTGGACCTCCTGGACTTGACGGACAGCCTGGGGCTCCTGGGCTTCCAGGGCCTCCTGGCCC 886039158 258840 NM_000138.4(FBN1):c.6611G>A (p.Cys2204Tyr) FBN1 Mar 21, 2016 MedGen:CN118826,Orphanet:ORPHA91387 Thoracic aortic aneurysm and aortic dissection germline 15 48434599 AGGGATTTGAGCCCGGTCCAATGATGACATGTGAAGGTACATCTCTTAAACAGAGAACAGT 780504025 16144 NM_000642.2(AGL):c.4259+5G>A AGL Jul 31, 2000 MedGen:C1968740 Glycogen storage disease IIIb germline 1 99915491 CTTGGCATGAAAACTTTAGATCCAGAGTAAGTTGGAATATAAGTATTAAGAATGTTATCAT 121909013 22181 NM_000492.3(CFTR):c.1651G>A (p.Gly551Ser) CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008;MedGen:CN236562;MedGen:CN517202 Cystic fibrosis;ivacaftor response - Efficacy;not provided germline;unknown 7 117587805 CTTGGAGAAGGTGGAATCACACTGAGTGGAGGTCAACGAGCAAGAATTTCTTTAGCAAGGT 1057517830 360507 NM_000455.4(STK11):c.735-1G>A STK11 Aug 12, 2015 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline 19 1221212 CACGCCTTTCTTCCCTCCCCTCGAAATGAAGCTACAACATCACCACGGGTCTGTACCCCTT 80338777 32664 NM_000069.2(CACNA1S):c.1583G>A (p.Arg528His) CACNA1S Jul 31, 2017 MedGen:C3714580,OMIM:170400;MedGen:CN517202 Hypokalemic periodic paralysis 1;not provided germline 1 201077915 CCATGACACCCCTGGGCATCTCCGTGCTCCGCTGCATCCGCCTCCTGAGGATCTTCAAGAT 587780639 139490 NM_000051.3(ATM):c.7788G>A (p.Glu2596=) ATM May 03, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Ataxia-telangiectasia syndrome;Hereditary cancer-predisposing syndrome;not provided germline 11 108332037 TGTGCCTAAACAAAGCTCTCAGCTTGATGAGGTATTTGGATTAAACATACGTACCTTTTAG -1 430634 NM_003336.3(UBE2A):c.67G>A (p.Gly23Arg) UBE2A Feb 18, 2016 MedGen:C3275464,OMIM:300860,Orphanet:ORPHA163956;MedGen:CN517202 Syndromic mental retardation, Nascimento type, X-linked;not provided de novo;germline X 119574923 TCCCGAAGGTTGCAGGAGGATCCTCCAGCCGGAGTCAGCGGGGCTCCGTCCGAGAACAACA 28941782 18277 NM_007171.3(POMT1):c.226G>A (p.Gly76Arg) POMT1 Nov 01, 2002 MedGen:CN033898,OMIM:236670 Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type a, 1 germline 9 131506217 CCGCCATTTGGCCACATGGTGCTGGCCTTGGGAGGTAGGAGTCATCAGGAGAGTAGCCCCT 267608122 94980 NM_000179.2(MSH6):c.4001G>A (p.Arg1334Gln) MSH6 Sep 15, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0009405,Orphanet:ORPHA443090;MedGen:C1833477,OMIM:614350;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:CN517202;MedGen:CN169374 Hereditary cancer-predisposing syndrome;Hereditary nonpolyposis colon cancer;Hereditary nonpolyposis colorectal cancer type 5;Lynch syndrome;not provided;not specified germline;unknown 2 47806651 AGAAGATGAATCAGTCACTACGATTATTTCGGTAACTAACTAACTATAATGGAATTATAAC 794729661 22121 NM_004336.4(BUB1):c.422+1G>A BUB1 Mar 19, 1998 MedGen:C4016796 Colorectal cancer with chromosomal instability germline 2 110672660 ACCCAGAGAGTTCCTGCAACAACAATACAGGTAGTTACAAAGTCAAACTCTCTGTGATGAT 199473704 39593 NM_145068.3(TRPV3):c.1717G>A (p.Gly573Ser) TRPV3 Mar 09, 2012 MedGen:C2609071,OMIM:614594,Orphanet:ORPHA659;MedGen:CN517202 Palmoplantar keratoderma, mutilating, with periorificial keratotic plaques;not provided germline 17 3524224 CTCTACTATACGCGGGGTTTCCAGTCCATGGGCATGTACAGCGTCATGATCCAGAAGGTGC 63750264 33127 NM_000484.3(APP):c.2149G>A (p.Val717Ile) APP Dec 23, 2010 MedGen:C1863052;Human Phenotype Ontology:HP:0002511,MedGen:C0002395,OMIM:104300,SNOMED CT:26929004;MedGen:CN517202 Alzheimer disease, type 1;Alzheimer's disease;not provided germline 21 25891784 GTGGGCGGTGTTGTCATAGCGACAGTGATCGTCATCACCTTGGTGATGCTGAAGAAGAAAC 28931614 31366 NM_000142.4(FGFR3):c.1138G>A (p.Gly380Arg) FGFR3 Jun 26, 2017 MedGen:C0001080,OMIM:100800,Orphanet:ORPHA15,SNOMED CT:86268005;MedGen:C0001080,OMIM:100800,Orphanet:ORPHA15,SNOMED CT:86268005;Human Phenotype Ontology:HP:0001363,MedGen:C1849943;Human Phenotype Ontology:HP:0010816,MedGen:C0334082,OMIM:162900,Orphanet:ORPHA35125,SNOMED CT:25201003;MedGen:CN517202;MedGen:CN169374 Achondroplasia;Achondroplasia;Craniosynostosis;Epidermal nevus;not provided;not specified germline;somatic 4 1804392 GGCAGTGTGTATGCAGGCATCCTCAGCTACGGGGTGGGCTTCTTCCTGTTCATCCTGGTGG 587779531 106980 NM_000090.3(COL3A1):c.844G>A (p.Gly282Arg) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188991049 AATGGAGAAAAGGGTGAAACAGGTGCTCCTGGATTAAAGGTAAATCACAACAAAAATCATA 281874672 35769 NM_000495.4(COL4A5):c.1598G>A (p.Gly533Glu) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108597387 TTTTTCCTTACTCATTTCAGGGCATTCCAGGAGCTCCAGGTGCTCCAGGCTTTCCTGGATC 879253719 28330 NM_000141.4(FGFR2):c.940-1G>A FGFR2 Jan 01, 2002 MedGen:C1863356,OMIM:101600 Pfeiffer syndrome germline 10 121517464 AGCCTTTTCTTTTGCTTCCCTTGTTTTCTAGGCCGCCGGTGTTAACACCACGGACAAAGAG 878853106 237433 NM_000016.5(ACADM):c.849+1G>A ACADM Feb 23, 2016 MedGen:CN517202 not provided germline 1 75749560 ATGGGAGCTTTTGATAAAACCAGACCTGTAGTAAGTAATATGGGTTCATAATCTTTATAGG 754594235 481195 NM_145869.1(ANXA11):c.523G>A (p.Gly175Arg) ANXA11 Jan 29, 2018 MedGen:CN778765,OMIM:617839 AMYOTROPHIC LATERAL SCLEROSIS 23 germline 10 80169007 CAGCCAGTGCCGAGCTACCCAGGATACCCGGGGTCTGGGACTGTCACCCCCGCTGTGCCCC 397514592 48389 NM_001083614.1(EARS2):c.610G>A (p.Gly204Ser) EARS2 Nov 20, 2012 MedGen:C3554079,OMIM:614924,Orphanet:ORPHA314051 Combined oxidative phosphorylation deficiency 12 germline 16 23535236 GTGGTGCCAGCCTTCCAGGACCTGGTCTATGGCTGGAATAGGCATGAAGTGGCCAGCGTGG 587783672 168869 NM_000525.3(KCNJ11):c.679G>A (p.Glu227Lys) KCNJ11 Jul 23, 2013 Human Phenotype Ontology:HP:0000819,MedGen:C0011849,SNOMED CT:73211009;MedGen:C4225365,OMIM:616329 Diabetes mellitus;Maturity-onset diabetes of the young, type 13 germline 11 17387413 ATGCAGGTGGTACGCAAGACCACCAGCCCCGAGGGCGAGGTGGTGCCCCTCCACCAGGTGG 121908545 20938 NM_000334.4(SCN4A):c.4343G>A (p.Arg1448His) SCN4A Dec 31, 2014 MedGen:CN074266,OMIM:170500;MedGen:C1868617,OMIM:168300;MedGen:CN517202 Hyperkalemic Periodic Paralysis Type 1;Paramyotonia congenita of von Eulenburg;not provided germline 17 63941939 AGAAGTACTTCGTGTCACCCACGCTGTTCCGTGTGATCCGCCTGGCGCGGATTGGGCGTGT 104886166 35839 NM_000495.4(COL4A5):c.2228G>A (p.Gly743Asp) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108603045 TTGGTCTAGAAGGCCCTCCTGGGCCACCCGGCTTTCCAGGACCAAAGGTCTGGGACATTTT 137852995 20000 NM_018136.4(ASPM):c.3978G>A (p.Trp1326Ter) ASPM Sep 01, 2009 MedGen:C1837501,OMIM:608716 Primary autosomal recessive microcephaly 5 germline 1 197117876 TAATGCAGCACTCGTCATTCAGAAATATTGGCGAAGAGTCTTAGCACAGAGAAAATTATTA 121909335 23513 NM_007126.4(VCP):c.476G>A (p.Arg159His) VCP Sep 15, 2016 MedGen:C1833662,OMIM:167320,Orphanet:ORPHA52430;MedGen:CN517202 Inclusion body myopathy with early-onset paget disease and frontotemporal dementia;not provided germline 9 35065351 GAGACATTTTTCTTGTCCGTGGTGGGATGCGTGCTGTGGAGTTCAAAGTGGTGGAAACAGA -1 481786 NM_032415.5(CARD11):c.220+1G>A CARD11 Dec 19, 2017 MedGen:CN517202 not provided germline 7 2947574 CTATGCTGCCATCCAAGATCAACCGAGCAGGTAACCTTAGGACCTCTTTGCGGGAGAGGGA 794726859 190155 NM_003042.3(SLC6A1):c.131G>A (p.Arg44Gln) SLC6A1 May 01, 2016 MedGen:C4085238,OMIM:616421 Myoclonic-atonic epilepsy germline;maternal 3 11017342 TGCAGAAGAAGGCGGCAGACCTCCCCGACCGGGACACGTGGAAGGGCCGCTTCGACTTCCT 387907322 38631 NM_000782.4(CYP24A1):c.476G>A (p.Arg159Gln) CYP24A1 Nov 09, 2011 MedGen:C0268080,OMIM:143880,SNOMED CT:34225008 Idiopathic hypercalcemia of infancy germline 20 54171644 ACAGGGAAGGGGAAGACTGGCAGCGGGTCCGGAGTGCCTTTCAAAAGAAACTAATGAAACC 104894784 26646 NM_178152.2(DCX):c.233G>A (p.Arg78His) DCX Sep 01, 1999 MedGen:C1848070 Subcortical laminar heterotopia, X-linked germline X 111410166 TTGTGTACGCTGTGTCCTCTGACCGTTTTCGCAGCTTTGACGCCTTGCTGGCTGACCTGAC 144332569 150466 NM_177550.4(SLC13A5):c.655G>A (p.Gly219Arg) SLC13A5 Jun 30, 2017 MedGen:C4014621,OMIM:615905 Epileptic encephalopathy, early infantile, 25 germline 17 6703031 ACCCTGTGCATCTGCTACGCGGCCAGCATCGGGGGCACCGCCACCCTGACCGGGACGGGAC 121434468 24643 m.4284G>A MT-TI Jan 29, 2015 MedGen:C0559758;MedGen:C0162672,OMIM:545000,Orphanet:ORPHA551 Multisystem disorder;Myoclonus with epilepsy with ragged red fibers germline MT 4284 TCAAACCTAAGAAATATGTCTGATAAAAGAGTTACTTTGATAGAGTAAATAATAGGAGCTT 67916658 102984 NM_000531.5(OTC):c.1006-1G>A OTC - MedGen:CN517202 not provided unknown X 38421022 CCATTTCTTTCTTTCTTTGTTGTGTCATCAGGCTGTCATGGTGTCCCTGCTGACAGATTAC 121908332 19780 NM_001282534.1(KCNK9):c.706G>A (p.Gly236Arg) KCNK9 Oct 20, 2017 MedGen:C2676770,OMIM:612292,Orphanet:ORPHA166108;MedGen:CN517202 Birk Barel mental retardation dysmorphism syndrome;not provided germline;unknown 8 139618677 ATGTATATCCTGGTGGGGCTGACGGTCATCGGGGCCTTCCTCAACCTGGTCGTCCTCAGGT -1 445823 NM_000088.3(COL1A1):c.751-1G>A COL1A1 Jun 15, 2017 MedGen:CN517202 not provided germline 17 50197064 GCCCTTCCTTGTCTTCTTCATCTCTCTCCAGGGTGCTCGAGGATTGCCCGGAACAGCTGGC 876660558 236140 NM_007294.3(BRCA1):c.1155G>A (p.Trp385Ter) BRCA1 Sep 08, 2016 MedGen:C2676676,OMIM:604370;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 1;Hereditary cancer-predisposing syndrome germline 17 43094376 AAATAGCAGCATTCAGAAAGTTAATGAGTGGTTTTCCAGAAGTGATGAACTGTTAGGTTCT -1 483116 NM_178170.2(NEK8):c.47+1G>A NEK8 Feb 14, 2018 MedGen:C3809434,OMIM:615415 Renal-hepatic-pancreatic dysplasia 2 germline 17 28728861 GATCCGAGTGGTGGGGAGAGGTGCCTTCGGGTGAGCCAGGGCTCTGGGGGAGGAAACTGCT 587779679 107184 NM_000090.3(COL3A1):c.1646G>A (p.Gly549Glu) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188996162 CCGGAAGTCCAGGAGGACCAGGAAGTGATGGGAAACCAGGGCCTCCCGTATGTACATTTTT 587777744 166023 NM_152292.4(TRMT10A):c.616G>A (p.Gly206Arg) TRMT10A Sep 01, 2014 MedGen:C4014997,OMIM:616033 Microcephaly, short stature, and impaired glucose metabolism 1 germline 4 99553814 GAATTAGATGAATCAAAGGCCTATGTGATTGGAGGATTAGTAGATCACAACCATCACAAGG 397515384 30964 NM_005272.3(GNAT2):c.461+24G>A GNAT2 Jun 27, 2013 MedGen:C1841721,OMIM:613856 Achromatopsia 4 germline 1 109608607 CATCTTAGTAAGACTGACTGGTGAGAGGGTGGGTTGATGCTTAAGCAATCTTCTAGCCAGT 74315458 34038 NM_000487.5(ARSA):c.257G>A (p.Arg86Gln) ARSA Jun 13, 2014 MedGen:C0023522,OMIM:250100,Orphanet:ORPHA512,SNOMED CT:396338004;MedGen:C4017093 Metachromatic leukodystrophy;Metachromatic leukodystrophy, late-onset germline 22 50627374 CCGCCCTCCTGACCGGCCGGCTCCCGGTTCGGATGGGCATGTACCCTGGCGTCCTGGTGCC 121908928 21648 NM_004086.2(COCH):c.263G>A (p.Gly88Glu) COCH Nov 01, 1998 MedGen:C1832425,OMIM:601369 Deafness, autosomal dominant 9 germline 14 30878834 GTTACAGGGGAGTAATCAGCAACTCAGGGGGACCTGTACGAGTCTATAGCCTACCTGGTCG 387906919 39462 NM_016363.5(GP6):c.524G>A (p.Ser175Asn) GP6 Aug 01, 2009 MedGen:C3280120,OMIM:614201,Orphanet:ORPHA98885 Platelet-type bleeding disorder 11 germline 19 55027664 TTCCCATCATCACGGTGACCGCCGCCCACAGCGGAACCTACCGATGCTACAGCTTCTCCAG 104894553 17655 NM_000049.2(ASPA):c.212G>A (p.Arg71His) ASPA Jun 14, 2016 MedGen:CN068568;MedGen:C0206307,OMIM:271900,Orphanet:ORPHA141,SNOMED CT:80544005 Canavan disease, mild;Spongy degeneration of central nervous system germline;unknown 17 3476371 GTACCAGATATATTGACTGTGACCTGAATCGCATTTTTGACCTTGAAAATCTTGGGTAAGA 121918236 16468 NM_001177317.1(SLC34A3):c.846G>A (p.Pro282=) SLC34A3 Sep 30, 2017 MedGen:C0342645,OMIM:241530,SNOMED CT:237891005 Autosomal recessive hypophosphatemic bone disease germline;maternal 9 137233722 TAAGCACTGGTGCGGCACCACGGGGCAGCCGGTGAGGCACCCAACCCTAGGCCCTCACTGA 121912921 32262 NM_000090.3(COL3A1):c.1997G>A (p.Gly666Asp) COL3A1 Mar 09, 2000 MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188998693 CAATCTCCCAGGGTCCAAAGGGTGATGCCGGTGCACCTGGAGCTCCAGGAGGCAAGGTAGT 398123936 100485 NM_004006.2(DMD):c.336G>A (p.Trp112Ter) DMD Nov 22, 2013 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009;MedGen:C3668940,OMIM:302045;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Becker muscular dystrophy;Dilated cardiomyopathy 3B;Duchenne muscular dystrophy germline X 32823316 AAATCATAAACTGACTCTTGGTTTGATTTGGAATATAATCCTCCACTGGCAGGTAAGAATC 869312873 223771 NM_052867.3(NALCN):c.3390G>A (p.Pro1130=) NALCN Dec 31, 2015 Human Phenotype Ontology:HP:0002793,MedGen:C1837388;Human Phenotype Ontology:HP:0004326,MedGen:C0006625;Human Phenotype Ontology:HP:0010864,MedGen:C0036857;Human Phenotype Ontology:HP:0001250,MedGen:C0036572;Human Phenotype Ontology:HP:0000486,MedGen:C0038379 Abnormal pattern of respiration;Cachexia;Intellectual disability, severe;Seizures;Strabismus germline 13 101089846 GAGAGATGTTATTATTCATCGTGTGGGGCCGGTAAGCGAGCACATCGAATCCTTTGAACAC 199826737 102956 NM_014714.3(IFT140):c.1565G>A (p.Gly522Glu) IFT140 May 01, 2013 MedGen:C4017372 Short-rib thoracic dysplasia without polydactyly germline 16 1571494 AACAACTCCTCCTTTTCTCGGAGACTGAGGGGAATCCCTGCTTCTTGGACATCTGTGGGAA 118203937 15950 NM_173483.3(CYP4F22):c.728G>A (p.Arg243His) CYP4F22 Mar 01, 2006 Gene:50992,MedGen:C1858142,OMIM:604777,OMIM:604781 Autosomal recessive congenital ichthyosis 5 germline 19 15540506 TCATTGAACTGAGCGCTCTGTCTGTCCGGCGCCAGTATCGCTTGCACCACTACCTCGACTT 863225340 214710 NM_000038.5(APC):c.3147G>A (p.Trp1049Ter) APC Jul 29, 2015 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline;unknown 5 112838741 AAGGCAAAGTCCTTCACAGAATGAAAGATGGGCAAGACCCAAACACATAATAGAAGATGAA 80338900 26908 NM_000137.2(FAH):c.1009G>A (p.Gly337Ser) FAH Dec 24, 2014 MedGen:C0268490,OMIM:276700,Orphanet:ORPHA882,SNOMED CT:124536006,SNOMED CT:410056006 Tyrosinemia type I germline;unknown 15 80180172 CTGCAGCAGCTCACTCACCACTCTGTCAACGGCTGCAACCTGCGGCCGGGGGACCTCCTGG 796053040 201441 NM_001165963.1(SCN1A):c.5435G>A (p.Trp1812Ter) SCN1A Dec 15, 2016 MedGen:CN517202 not provided germline 2 165991840 AGGATGACTTTGAGATGTTCTATGAGGTTTGGGAGAAGTTTGATCCCGATGCAACTCAGTT 351855 31365 NM_213647.2(FGFR4):c.1162G>A (p.Gly388Arg) FGFR4 Feb 01, 2002 MedGen:C4016099 Cancer progression and tumor cell motility unknown 5 177093242 CTGGCCTTGGCTGTGCTCCTGCTGCTGGCCGGGCTGTATCGAGGGCAGGCGCTCCACGGCC 886043692 271914 NM_000426.3(LAMA2):c.7155+1G>A LAMA2 Jun 09, 2016 MedGen:C1263858,OMIM:607855,Orphanet:ORPHA258,SNOMED CT:111503008 Merosin deficient congenital muscular dystrophy germline 6 129464453 CTTCTGATGTATCTTGCCACACGAGACCTGGTAAAGATCATATGCATAGCAGAGTTTCCGT 564856283 227702 NM_002465.3(MYBPC1):c.742G>A (p.Glu248Lys) MYBPC1 May 06, 2016 MedGen:CN517202 not provided inherited;not applicable 12 101642495 TTGCTGAAGAACGCGAAACCCAGTGAGTACGAGAAGATCGCCTTCCAGTATGGAATCACCG 63750604 95363 NM_000249.3(MLH1):c.1790G>A (p.Trp597Ter) MLH1 Aug 03, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Lynch syndrome;not provided germline 3 37047577 TGCTTGCCTTAGATAGTCCAGAGAGTGGCTGGACAGAGGAAGATGGTCCCAAAGAAGGACT -1 451192 NM_014946.3(SPAST):c.1412G>A (p.Gly471Asp) SPAST Jun 19, 2017 MedGen:C1866855,OMIM:182601,Orphanet:ORPHA100985 Spastic paraplegia 4, autosomal dominant germline 2 32136967 TAAAAACTGAATTTCTAATAGAATTTGATGGTGTAAGTGTTGATTATGATATTTTTAATGT 121918007 28709 NM_000478.5(ALPL):c.571G>A (p.Glu191Lys) ALPL Oct 31, 2017 MedGen:C0268413,OMIM:146300,Orphanet:ORPHA247676,SNOMED CT:20756002;MedGen:C0220743,OMIM:241510,SNOMED CT:30174008;MedGen:C0020630,Orphanet:ORPHA436;Human Phenotype Ontology:HP:0003239,MedGen:C0268412,OMIM:241500,Orphanet:ORPHA247651,SNOMED CT:55236002;MedGen:CN517202 Adult hypophosphatasia;Childhood hypophosphatasia;Hypophosphatasia;Infantile hypophosphatasia;not provided germline;unknown 1 21564139 TCGGCTGACCGGGACTGGTACTCAGACAACGAGATGCCCCCTGAGGCCTTGAGCCAGGGCT 587783978 168448 NM_133433.3(NIPBL):c.5483G>A (p.Arg1828Gln) NIPBL Mar 21, 2014 MedGen:CN029798,OMIM:122470 Cornelia de Lange syndrome 1 germline 5 37022299 GACGATTGATGGATAATTCGACTAGTGTCCGAGAAGCAGCAGTAGAATTACTAGGTCGATT 863225310 214681 NM_000038.5(APC):c.1312+1G>A APC Jun 22, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline;unknown 5 112819345 AACCAGGCATGGACCAGGACAAAAATCCAAGTATGTTCTCTATAGTGTACATCGTAGTGCA 137852394 25216 NM_000132.3(F8):c.541G>A (p.Val181Met) F8 Jan 01, 1992 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154992996 CTGTGCCTTACCTACTCATATCTTTCTCATGTGGACCTGGTAAAAGACTTGAATTCAGGCC 587779621 107089 NM_000090.3(COL3A1):c.1358G>A (p.Gly453Asp) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188994734 CCATCTTTTTTTTTTTTCAGGGTGAGGCTGGTATTCCAGGTGTTCCAGGAGCTAAAGGCGA 1057519739 362876 NM_005359.5(SMAD4):c.1051G>A (p.Asp351Asn) SMAD4 Oct 02, 2014 MeSH:D015179,MedGen:CN236642 Colorectal Neoplasms somatic 18 51065518 GTTCCTTCAAGCTGCCCTATTGTTACTGTTGATGGATACGTGGACCCTTCTGGAGGAGATC 587779517 106962 NM_000090.3(COL3A1):c.2825G>A (p.Gly942Glu) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189004258 ATGAGCTAAGTCTTCATTATCTGTATTAGGGAGCTCCAGGCCCACTTGGGATTGCTGGGAT 74315387 23418 NM_000557.4(GDF5):c.1199G>A (p.Cys400Tyr) GDF5 Sep 01, 1997 MedGen:C0265260,OMIM:200700,Orphanet:ORPHA2098,SNOMED CT:77542002 Grebe syndrome germline 20 35434216 AGCGACCCAGCAAGAACCTTAAGGCTCGCTGCAGTCGGAAGGCACTGCATGTCAACTTCAA 80338892 27366 NM_199292.2(TH):c.698G>A (p.Arg233His) TH Sep 10, 2015 MedGen:C1854299,OMIM:605407 Segawa syndrome, autosomal recessive germline;unknown 11 2167905 AGGGCTTCTCGGACCAGGTGTACCGCCAGCGCAGGAAGCTGATTGCTGAGATCGCCTTCCA 318240758 48294 NM_005334.2(HCFC1):c.674G>A (p.Ser225Asn) HCFC1 Oct 19, 2012 MedGen:C0796208,OMIM:309541,Orphanet:ORPHA369962;MedGen:CN517202 Mental retardation 3, X-linked;not provided germline X 153963263 AGTCCAAGCTGGTGATCTACGGCGGGATGAGTGGCTGCAGGCTGGGGGACCTGTGGACCCT 776073429 259852 NM_000083.2(CLCN1):c.774+1G>A CLCN1 Sep 07, 2017 MedGen:C0751360,OMIM:255700,SNOMED CT:20305008;MedGen:C0027127,Orphanet:ORPHA206973;MedGen:CN517202 Congenital myotonia, autosomal recessive form;Myotonia congenita;not provided germline 7 143323387 TTCATGTCTGTGTTCTGCGGGGTATATGAGGTAAGGTTGAGACAGTGAAATGAGCTGGGGC -1 487606 NM_000053.3(ATP7B):c.2131G>A (p.Gly711Arg) ATP7B Aug 23, 2017 MedGen:C0019202,OMIM:277900,Orphanet:ORPHA905,SNOMED CT:88518009 Wilson disease germline 13 51958535 TTCACTGTCCTTGTCTTTCAGCTCCTCGGTGGGTGGTACTTCTACGTTCAGGCCTACAAAT 1057518122 360037 NM_020366.3(RPGRIP1):c.3339+5G>A RPGRIP1 May 09, 2017 MeSH:D057130,MedGen:C0339527,Orphanet:ORPHA65,SNOMED CT:193413001;MedGen:CN517202 Leber congenital amaurosis;not provided germline 14 21334710 CCATGTCTCAGAAATATCCTAAGGCAGTAAGTACACTGGAGTAATCATTGCATACGAGATA 886037711 248835 NM_177438.2(DICER1):c.4190G>A (p.W1397*) DICER1 Nov 10, 2014 MedGen:CN072455,OMIM:601200;MedGen:C0027672,SNOMED CT:699346009 DICER1-related pleuropulmonary blastoma cancer predisposition syndrome;Hereditary cancer-predisposing syndrome germline 14 95099796 TAAATCAAGACAAAAGCAACACAGATAAATGGGAAAAAGATGAAATGGTAAGTTTGTGTGT 104893874 33285 NM_001151.3(SLC25A4):c.865G>A (p.Val289Met) SLC25A4 Apr 01, 1996 MedGen:C1836460,OMIM:609283 Autosomal dominant progressive external ophthalmoplegia with mitochondrial DNA deletions 2 germline 4 185146939 CTGAGAGGCATGGGCGGTGCTTTTGTATTGGTGTTGTATGATGAGATCAAAAAATATGTCT 121918158 15716 NM_000312.3(PROC):c.1015G>A (p.Val339Met) PROC Aug 01, 1993 MedGen:C2674321,OMIM:176860 Thrombophilia, hereditary, due to protein C deficiency, autosomal dominant germline 2 127428575 GAGCTCAATCAGGCCGGCCAGGAGACCCTCGTGACGGGCTGGGGCTACCACAGCAGCCGAG 1085307168 414095 NM_001204.6(BMPR2):c.140G>A (p.Gly47Asp) BMPR2 - MedGen:CN243982 Pulmonary arterial hypertension associated with congenital heart disease germline 2 202464872 AAGATCCGTATCAGCAAGACCTTGGGATAGGTGAGAGTAGAATCTCTCATGAAAATGGGAC 121918408 31100 NM_001146040.1(GLRA1):c.896G>A (p.Arg299Gln) GLRA1 Jul 05, 2017 MedGen:C1835614,OMIM:149400,Orphanet:ORPHA3197 Hyperekplexia hereditary germline 5 151851406 TCACCATGACCACCCAGAGCTCCGGCTCTCGAGCATCTCTGCCCAAGGTAAGTCCCATTGC 58330629 29652 NM_000526.4(KRT14):c.374G>A (p.Arg125His) KRT14 Oct 30, 2017 MedGen:C0079295,OMIM:131760,Orphanet:ORPHA79396;MedGen:CN517202 Epidermolysis bullosa herpetiformis, Dowling-Meara;not provided germline 17 41586461 AGAAGGTGACCATGCAGAACCTCAATGACCGCCTGGCCTCCTACCTGGACAAGGTGCGTGC 397515568 76649 NM_052985.3(IFT122):c.1636G>A (p.Gly546Arg) IFT122 Sep 12, 2013 MedGen:C0432235,OMIM:218330 Cranioectodermal dysplasia 1 not provided 3 129479917 AGAGAAGGCCTCTTAGTGGGGCTGAAGAATGGACAGGTGAGTGCTCCCTCACGTCTCCTGT 121912650 27744 NM_003235.4(TG):c.7007G>A (p.Arg2336Gln) TG Jan 01, 2006 MedGen:C0342194,OMIM:274700,SNOMED CT:23536000 Iodotyrosyl coupling defect germline 8 133022121 GCAACCTCATCGTGGTCACTGCCAGCTACCGAGTGGGTGTCTTCGGCTTCCTGAGTTCTGG 886042002 264121 NM_006218.3(PIK3CA):c.323G>A (p.Arg108His) PIK3CA Oct 03, 2016 MedGen:CN517202 not provided germline 3 179199148 TTTTAAAAGTAATTGAACCAGTAGGCAACCGTGAAGAAAAGATCCTCAATCGAGAAATTGG 864309731 216036 NM_172250.2(MMAA):c.1076G>A (p.Arg359Gln) MMAA Jan 07, 2016 MedGen:C1855109,OMIM:251100,Orphanet:ORPHA79310 Methylmalonic aciduria cblA type germline 4 145655253 TGCTTGCCAGTGGGGAGCTGACTGCCAAACGACGGAAGCAACAGAAAGTTTGGATGTGGAA 781798317 223699 NM_173471.3(SLC25A26):c.33+1G>A SLC25A26 Oct 20, 2017 MedGen:C4225206,OMIM:616794,Orphanet:ORPHA466784 Combined oxidative phosphorylation deficiency 28 germline 3 66221128 GACCGGCCGGGGTTCGTGGCAGCGCTGGTGGTGAGTGCGGGGCGGTGGGGTGGGTTGCTCA 587779454 106890 NM_000090.3(COL3A1):c.1988G>A (p.Gly663Asp) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188998684 ATATAATGCCAATCTCCCAGGGTCCAAAGGGTGATGCCGGTGCACCTGGAGCTCCAGGAGG 312262814 49521 NM_003611.2(OFD1):c.235G>A (p.Ala79Thr) OFD1 Feb 28, 2013 MedGen:C1510460,OMIM:311200,Orphanet:ORPHA2750,SNOMED CT:52868006 Oral-facial-digital syndrome not provided X 13736601 CTCTTAATAGGCGCCTCTAACTCTTTAGTGGCAGATCACTTACAAAGATGTGGCTATGAAT 587776756 26779 NM_000489.4(ATRX):c.20+1G>A ATRX Aug 01, 2003 MedGen:C0585216,OMIM:300448,Orphanet:ORPHA231401,SNOMED CT:307343001 Acquired hemoglobin H disease somatic X 77785981 AAGCGAAAACATGACCGCTGAGCCCATGAGGTAAAACGCAACCCCGTCTCATGGGCCCCAG 111033734 36554 NM_000155.3(GALT):c.575G>A (p.Ser192Asn) GALT Dec 04, 2012 MedGen:C0268151,OMIM:230400,Orphanet:ORPHA79239,SNOMED CT:124354006 Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase not provided 9 34648344 CTGCTTTTGCCCCTTGACAGGTATGGGCCAGCAGTTTCCTGCCAGATATTGCCCAGCGTGA 794726857 189167 NC_012920.1:m.8969G>A MT-ATP6 Nov 01, 2014 MedGen:C4225415,OMIM:500011 Myopathy, lactic acidosis, and sideroblastic anemia 3 germline MT 8969 TCCCCATACTAGTTATTATCGAAACCATCAGCCTACTCATTCAACCAATAGCCCTGGCCGT 386833553 70711 NM_000170.2(GLDC):c.2311G>A (p.Gly771Arg) GLDC Jul 19, 2017 Human Phenotype Ontology:HP:0008288,MedGen:C0751748,OMIM:605899,Orphanet:ORPHA407,SNOMED CT:237939006 Non-ketotic hyperglycinemia germline 9 6554673 GGAGGAGGTGGTCCTGGCATGGGGCCCATCGGAGTGTAAGTTCTGGGCTGCTGGTTTCAGG 869320697 227015 NM_001903.4(CTNNA1):c.919G>A (p.Glu307Lys) CTNNA1 Apr 08, 2016 Gene:619480,MedGen:C1837029,OMIM:608970 Macular dystrophy, patterned, 2 germline 5 138827575 AGCGAGGAGCGCTTTAGGCCTTCCCTGGAGGAGCGTCTGGAAAGCATCATTAGTGGGGCTG 104886214 35936 NM_000495.4(COL4A5):c.3115G>A (p.Gly1039Ser) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108626218 ATATATCACATATTTTCAACAGGGCCTCAGGGTGTGGAAGGGCCTCCTGGACCTTCTGGAG 113994024 19476 NM_020365.4(EIF2B3):c.674G>A (p.Arg225Gln) EIF2B3 Feb 01, 2002 MedGen:C1858991,OMIM:603896,Orphanet:ORPHA99854 Leukoencephalopathy with vanishing white matter germline 1 44881722 TCTTTCTTTCTAGGTCAATAACTTCTATCCGGAGTGAACTGATTCCATATTTAGTGAGAAA 750474121 245461 NM_000527.4(LDLR):c.292G>A (p.Gly98Ser) LDLR Mar 25, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11102765 AGGTGCGATGGCCAAGTGGACTGCGACAACGGCTCAGACGAGCAAGGCTGTCGTAAGTGTG 397515861 51611 NM_000138.4(FBN1):c.8267G>A (p.Trp2756Ter) FBN1 Jul 01, 2010 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006 Marfan syndrome germline 15 48411339 AGACAGAAGCCAATGTGAGTCTTGCAAGTTGGGATGTTGAGAAGACAGCCATCTTTGCTTT 886041085 263786 NM_005993.4(TBCD):c.2761G>A (p.Ala921Thr) TBCD Nov 16, 2016 MedGen:C4310671,OMIM:617193 Encephalopathy, progressive, early-onset, with brain atrophy and thin corpus callosum germline 17 82929180 AGTGAGAAGATTGACCGTTTCCGTGCTCACGCCGCCAGCGTGTTCCTGACGCTCCTGCACT 587779644 107124 NM_000090.3(COL3A1):c.827G>A (p.Gly276Asp) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188991032 AGGGCTTCGATGGACGAAATGGAGAAAAGGGTGAAACAGGTGCTCCTGGATTAAAGGTAAA 387906558 32433 NM_001844.4(COL2A1):c.2149G>A (p.Gly717Ser) COL2A1 Jun 02, 2005 MedGen:C0410480,OMIM:608805,SNOMED CT:203476003 Avascular necrosis of the head of femur germline 12 47982892 CGTGGCTCTCCCGGTGCCCAGGGCCTCCAGGGTCCCCGTGGCCTCCCCGGCACTCCTGGCA 199422239 24817 NM_004187.3(KDM5C):c.229G>A (p.Ala77Thr) KDM5C Dec 01, 2008 MedGen:C1845243,OMIM:300534,Orphanet:ORPHA85279 Mental retardation, syndromic, Claes-Jensen type, X-linked germline X 53218398 GCCAGCCTCTTTGAGCCATTTCTTCTTCAGGCCCAGACGAGAGTGAAACTGAACTACTTGG 121918741 79522 NM_006920.4(SCN1A):c.4265G>A (p.Gly1422Glu) SCN1A Jun 22, 2017 MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002;MedGen:CN517202 Severe myoclonic epilepsy in infancy;not provided de novo;germline 2 165999763 CATGTCCTTCTTAATAGGCCACATTCAAAGGATGGATGGATATAATGTATGCAGCAGTTGA 104886158 35819 NM_000495.4(COL4A5):c.2042G>A (p.Gly681Asp) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108601885 TTCCTTTCAATAACTGCTGTTTCTCCATAGGTGACCCTGGACTTCCAGGGCAACCAGGCTT 121908940 21773 NM_006892.3(DNMT3B):c.2452G>A (p.Val818Met) DNMT3B Nov 11, 1999 MedGen:C0398788,OMIM:242860,SNOMED CT:234633000 Centromeric instability of chromosomes 1,9 and 16 and immunodeficiency germline 20 32807793 ATCTTTGGCTTTCCTGTGCACTACACAGACGTGTCCAACATGGGCCGTGGTGCCCGCCAGA -1 440681 NM_000091.4(COL4A3):c.2126G>A (p.Gly709Glu) COL4A3 Jun 01, 2017 MedGen:CN517202 not provided germline 2 227279793 ACAACAATGTTTATTGTTTTTTCTCTGTAGGAGACCAAGGTTTTCCAGGTACAAAAGGATC 587776782 132337 NM_000321.2(RB1):c.1049+1G>A RB1 Nov 11, 2013 MedGen:C0027672,SNOMED CT:699346009;Human Phenotype Ontology:HP:0009919,MeSH:D012175,MedGen:C0035335,OMIM:180200,Orphanet:ORPHA790 Hereditary cancer-predisposing syndrome;Retinoblastoma germline;somatic 13 48367604 TAAAACTCTTCAGACTGATTCTATAGACAGGTATTGCACATGGTATATTTGATTGATTTGC 794726718 187795 NM_001165963.1(SCN1A):c.2792G>A (p.Arg931His) SCN1A Jun 05, 2017 MedGen:C0393706,Orphanet:ORPHA1934;MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002;MedGen:CN517202 Early infantile epileptic encephalopathy;Severe myoclonic epilepsy in infancy;not provided de novo;germline 2 166037930 GCAAGATCGCCAGTGATTGTCAACTCCCACGCTGGCACATGAATGACTTCTTCCACTCCTT 1131690808 420591 NM_004360.4(CDH1):c.531+1G>A CDH1 Apr 21, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1708349,OMIM:137215,Orphanet:ORPHA26106 Hereditary cancer-predisposing syndrome;Hereditary diffuse gastric cancer germline 16 68808568 AAAGGCCCATTTCCTAAAAACCTGGTTCAGGTAGAGAAAGAAGTTCTCTGTTTCTCTGGGA 121434295 18558 NM_005957.4(MTHFR):c.470G>A (p.Arg157Gln) MTHFR Jun 01, 1994 MedGen:CN068661 Homocystinuria due to MTHFR deficiency germline 1 11801166 AGCTGGGCCTGAAGAACATCATGGCGCTGCGGGGAGGTGTGGAGCCAGCACTCCCCTACAC 587779440 106888 NM_000090.3(COL3A1):c.899G>A (p.Gly300Asp) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188991670 TAAAACCATATTTCAATTTTACTCTGTAGGGTCCAAGAGGGGCTCCTGGTGAGCGAGGACG 766016391 194594 NM_003494.3(DYSF):c.4434G>A (p.Trp1478Ter) DYSF Jul 03, 2017 MedGen:C2931687,Orphanet:ORPHA207073;MedGen:C1850889,OMIM:253601,Orphanet:ORPHA268;MedGen:C1850808,OMIM:254130,Orphanet:ORPHA45448 Dysferlinopathy;Limb-girdle muscular dystrophy, type 2B;Miyoshi muscular dystrophy 1 germline 2 71643988 CACTCAGGAGGAAGAGTTCATCGATTGGTGGAGCAAATTCTTTGCCTCCATAGGGGAGAGG 111033588 22553 NM_002496.3(NDUFS8):c.413G>A (p.Arg138His) NDUFS8 May 25, 2004 MedGen:C1838979,OMIM:252010 Mitochondrial complex I deficiency germline 11 68036293 TCGAGGCTGAGCCAAGAGCTGATGGCAGCCGCCGGACCACCCGCTATGACATCGACATGAC 5030861 15615 NM_000277.2(PAH):c.1315+1G>A PAH Oct 19, 2017 MedGen:C0031485,OMIM:261600,Orphanet:ORPHA716,SNOMED CT:154735006;MedGen:CN517202 Phenylketonuria;not provided germline;unknown 12 102840399 AGCTTAAGATTTTGGCTGATTCCATTAACAGTAAGTAATTTACACCTTACGAGGCCACTCG 875989915 228159 NM_000527.4(LDLR):c.1073G>A (p.Cys358Tyr) LDLR Dec 16, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11111526 TCTTTCTCTCTCTTCCAGATATCGATGAGTGTCAGGATCCCGACACCTGCAGCCAGCTCTG -1 457572 NM_194456.1(KRIT1):c.812G>A (p.Trp271Ter) KRIT1 Jun 26, 2017 MedGen:C1861784,OMIM:116860 Cerebral cavernous malformation germline 7 92234841 CAAAAATCCAAATACCTAAACAGGAAAAATGGCAGAGAAGCATGAGCAGTGTCACAGAAGA 121909215 22915 NM_000358.2(TGFBI):c.1868G>A (p.Gly623Asp) TGFBI Jun 01, 2005 MedGen:C0339278,OMIM:608470,Orphanet:ORPHA98961,SNOMED CT:231930000 Reis-Bucklers' corneal dystrophy germline 5 136060898 TTGCCGAGCCTGACATCATGGCCACAAATGGCGTGGTCCATGTCATCACCAATGTTCTGCA 121909370 23696 NM_000163.4(GHR):c.102G>A (p.Trp34Ter) GHR Apr 01, 2003 MedGen:C0271568,OMIM:262500,Orphanet:ORPHA633,SNOMED CT:38196001 Laron-type isolated somatotropin defect germline 5 42629069 CACAGCAGCTATCCTTAGCAGAGCACCCTGGAGTCTGCAAAGTGTTAATCCAGGCCTAAAG 9332969 24868 NM_000044.4(AR):c.2522G>A (p.Arg841His) AR Nov 30, 2007 MedGen:C0039585,OMIM:300068,SNOMED CT:12313004;MedGen:C0268301,OMIM:312300,Orphanet:ORPHA90797,SNOMED CT:58672003 Androgen resistance syndrome;Partial androgen insensitivity syndrome germline X 67722899 TTCGAATGAACTACATCAAGGAACTCGATCGTATCATTGCATGCAAAAGAAAAAATCCCAC 770931871 481367 NM_004092.3(ECHS1):c.394G>A (p.Ala132Thr) ECHS1 Nov 16, 2017 MedGen:C4225391,OMIM:616277 Mitochondrial short-chain enoyl-coa hydratase 1 deficiency maternal;paternal 10 133369924 CACCTCACCCAGGTCAAGAAGCCAGTCATCGCTGCTGTCAATGGCTATGCCGTGAGTGTTG 267607184 29720 NM_000208.3(INSR):c.1177G>A (p.Gly393Arg) INSR Dec 05, 2016 MedGen:C0265344,OMIM:246200,Orphanet:ORPHA508,SNOMED CT:111307005 Leprechaunism syndrome germline 19 7172381 GCCAACCTCGGCCTCATTGAAGAAATTTCAGGGTATCTAAAAATCCGCCGATCCTACGCTC 387906286 17904 NM_001171507.2(MCFD2):c.149+5G>A MCFD2 Jun 01, 2003 MedGen:C3150889,OMIM:613625 Factor v and factor viii, combined deficiency of, 2 germline 2 46909018 GATAAGAACACAGTGCACGACCAAGAGTACGTATTCAGCCCGGGCTGTGGTCCAGTGGCCT 1131691611 421362 NM_173076.2(ABCA12):c.2593-1G>A ABCA12 Sep 28, 2015 MedGen:CN517202 not provided germline 2 215004300 TTGAAACTGATTTTTAATTATTATTTGTTAGAATACTCTAAGGAACCCTTTTGTGCAAGTT 878854403 227715 NM_001277059.1(ERCC6):c.2237G>A (p.Gly746Asp) ERCC6 Apr 13, 2017 MedGen:C4310783,OMIM:616946 Premature ovarian failure 11 germline 10 49516282 GCTTTGATGAATTCATGGTTCCTTATTTTGGTCGTCACGGGTGCAAACAATTTATTCGGGG 587779606 107069 NM_000090.3(COL3A1):c.2194G>A (p.Gly732Arg) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188999542 CCTGGTCTGCAAGGAATGCCTGGAGAAAGAGGAGGTCTTGGAAGTCCTGGTCCAAAGGGTG -1 467511 NM_000546.5(TP53):c.783-1G>A TP53 Aug 14, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0085390,Orphanet:ORPHA524,SNOMED CT:428850001 Hereditary cancer-predisposing syndrome;Li-Fraumeni syndrome germline 17 7673838 CCTCTTGCTTCTCTTTTCCTATCCTGAGTAGTGGTAATCTACTGGGACGGAACAGCTTTGA 80356772 33922 NM_000157.3(GBA):c.1505G>A (p.Arg502His) GBA Feb 05, 2016 MedGen:C0017205,Orphanet:ORPHA355;MedGen:C1961835,OMIM:230800,SNOMED CT:62201009 Gaucher disease;Gaucher's disease, type 1 unknown 1 155235195 ATGGCTCTGCTGTTGTGGTCGTGCTAAACCGGTGAGGGCAATGGTGAGGTCTGGGAAGTGG 1085307876 415501 NM_020988.2(GNAO1):c.724-8G>A GNAO1 Mar 17, 2017 MedGen:CN517202 not provided germline 16 56351376 CGCTGTCTGTCCTCTCTCCTCCCTTCCTGCGGCCGCAGAACCGCATGCACGAGTCTCTCAT 397507981 67234 NM_000059.3(BRCA2):c.8364G>A (p.Trp2788Ter) BRCA2 Sep 08, 2016 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline 13 32370434 TTCTGCTAACAGTACTCGGCCTGCTCGCTGGTATACCAAACTTGGATTCTTTCCTGACCCT 74315358 17450 NM_032409.2(PINK1):c.836G>A (p.Arg279His) PINK1 Oct 01, 2008 MedGen:C1853833,OMIM:605909 Parkinson disease 6, autosomal recessive early-onset germline 1 20644549 CCCCTCACCCCAACATCATCCGGGTTCTCCGCGCCTTCACCTCTTCCGTGCCGCTGCTGCC 267606694 33481 NM_001218.4(CA12):c.427G>A (p.Glu143Lys) CA12 Apr 01, 2011 MedGen:C1840437,OMIM:143860 Hyperchlorhidrosis, isolated germline 15 63345479 CACACCGTCAGCGGACAGCACTTCGCCGCCGAGGTAAGTAGGGCTGCCAGTCTGGCAGAGG 137854607 24424 NM_198056.2(SCN5A):c.4783G>A (p.Asp1595Asn) SCN5A Feb 10, 2017 EFO:EFO_0005305,Human Phenotype Ontology:HP:0001678,MedGen:C1841659;MedGen:C1142166,Orphanet:ORPHA130,SNOMED CT:418818005;MedGen:C1879286,OMIM:113900;MedGen:CN517202 Atrioventricular block;Brugada syndrome;Progressive familial heart block type 1A;not provided germline 3 38554309 TACTACTTCACCAACAGCTGGAATATCTTCGACTTCGTGGTTGTCATCCTCTCCATCGTGG 104886338 35788 NM_000495.4(COL4A5):c.1780-1G>A COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108598701 ATGTTTCTGTATTAAACTTTTCCCTTTTTAGGGTGGAATTACTTTTAAGGGTGAAAGAGGT 1085307153 414079 NM_001204.6(BMPR2):c.47G>A (p.W16*) BMPR2 - MedGen:C0152171,OMIM:178600,SNOMED CT:26174007 Primary pulmonary hypertension germline 2 202377521 AGCGGCCCTGGCGGGTGCCCTGGCTACCATGGACCATCCTGCTGGTCAGCACTGCGGCTGG 754022333 223714 NM_012473.3(TXN2):c.71G>A (p.Trp24Ter) TXN2 Feb 19, 2016 MedGen:C4225200,OMIM:616811 Combined oxidative phosphorylation deficiency 29 germline 22 36480767 TCATCTCCAGGAAGCCCTCTCAGGGTCAGTGGCCACCCCTCACTTCCAGAGCCCTGCAGAC 121912678 33348 NM_001105.4(ACVR1):c.617G>A (p.Arg206His) ACVR1 Jan 05, 2017 MedGen:C0016037,OMIM:135100,Orphanet:ORPHA337,SNOMED CT:82725007;MedGen:CN517202 Progressive myositis ossificans;not provided germline 2 157774114 TTCCTTTTCTGGTACAAAGAACAGTGGCTCGCCAGATTACACTGTTGGAGTGTGTCGGTAA 150376474 434435 NM_172250.2(MMAA):c.658G>A (p.Val220Met) MMAA - MedGen:C1855109,OMIM:251100,Orphanet:ORPHA79310 Methylmalonic aciduria cblA type germline 4 145646081 CCATCTCCTACTAGAGGAACTTTAGGAGGCGTGACAAGGACCACAAATGAAGCTATTCTGT 181949335 55296 NM_024022.2(TMPRSS3):c.916G>A (p.Ala306Thr) TMPRSS3 Aug 11, 2014 MedGen:CN043648,Orphanet:ORPHA87884 Nonsyndromic hearing loss and deafness germline 21 42382101 TACAAGCCAAAGAGGCTGGGCAATGACATCGCCCTTATGAAGCTGGCCGGGCCACTCACGT 137853096 22694 NM_000414.3(HSD17B4):c.46G>A (p.Gly16Ser) HSD17B4 Aug 17, 2017 MedGen:C0342870,OMIM:261515,Orphanet:ORPHA300,SNOMED CT:238068007;MedGen:CN517202 Bifunctional peroxisomal enzyme deficiency;not provided germline;unknown 5 119452621 AGGTTCGACGGGCGGGTGGTACTGGTCACCGGCGCGGGGGCAGGTGAGCATGCGAAGGTTG 1064793942 408422 NM_032193.3(RNASEH2C):c.450G>A (p.Trp150Ter) RNASEH2C Jul 31, 2015 MedGen:CN517202 not provided germline 11 65720063 GGATGCCAAAGTGCGTGGGGCCTTAACTTGGCCCAGCCTTGCGGCAGCGGTGAGTAGACGA 132630292 26129 NM_001128834.2(PLP1):c.434G>A (p.Trp145Ter) PLP1 Mar 17, 1997 MedGen:C0751915 Pelizaeus-Merzbacher disease, atypical germline X 103786707 TGGAGCGGGTGTGTCATTGTTTGGGAAAATGGCTAGGACATCCCGACAAGGTGATCATCCT 28942081 18736 NM_000527.4(LDLR):c.1637G>A (p.Gly546Asp) LDLR Mar 30, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11116144 GGGGAACTCCCGCCAAGATCAAGAAAGGGGGCCTGAATGGTGTGGACATCTACTCGCTGGT 587777626 153723 NM_022773.3(LMF1):c.1391G>A (p.Trp464Ter) LMF1 Nov 01, 2009 MedGen:C1855498,OMIM:246650 Lipase deficiency combined germline 16 869908 TCATCTCCCCGTACCACTACCGCCTGGACTGGCTGATGTGGTTCGCGGCCTTCCAGGTGGG 142761835 177782 NM_002225.3(IVD):c.367G>A (p.Gly123Arg) IVD Sep 01, 2017 MedGen:C0268575,OMIM:243500,Orphanet:ORPHA33,SNOMED CT:87827003;MedGen:CN517202 Isovaleryl-CoA dehydrogenase deficiency;not provided germline;unknown 15 40410699 CTGGTGATGGAGGAGATATCCCGAGCTTCCGGAGCAGTGGGGCTCAGTTACGGTGCCCACT 587777471 143160 NM_015072.4(TTLL5):c.3354G>A (p.Trp1118Ter) TTLL5 May 01, 2014 MedGen:C4014501,OMIM:615860 Cone-rod dystrophy 19 germline 14 75863694 CAGGAGCCTGCAGACAGGGGGATTTGCCTGGGAAGGAGAAGTAGAAAACAACGTGTACAGC 121908071 19185 NM_022455.4(NSD1):c.6605G>A (p.Cys2202Tyr) NSD1 Sep 25, 2017 MedGen:CN035106,OMIM:117550 Sotos syndrome 1 germline 5 177293973 TCATTTCCAAACTGGATGGGCGTCTGTCTTGTACTGAGCATGACCCCTGTGGGCCCAATCC 1057517585 358911 NM_024675.3(PALB2):c.3G>A (p.Met1Ile) PALB2 Nov 28, 2017 MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Familial cancer of breast;Hereditary cancer-predisposing syndrome;not provided germline;unknown 16 23641155 CTGCTCTTTTCGTTCTGTCGCCTGCCCGATGGACGAGCCTCCCGGGAAGCCCCTCAGCTGT 121909737 31168 NM_005271.4(GLUD1):c.965G>A (p.Arg322His) GLUD1 Mar 27, 2017 MedGen:C1847555,OMIM:606762,Orphanet:ORPHA35878 Hyperinsulinism-hyperammonemia syndrome germline 10 87061009 TGGGCCTACACTCTATGAGATATTTACATCGTTTTGGTGCTAAATGTATTGCTGTTGGTGA 886041529 265147 NM_000444.5(PHEX):c.664-1G>A PHEX Aug 15, 2016 MedGen:CN517202 not provided germline X 22090428 AGCAGAATGCTTTCTGTTTTTGTTTTTACAGCTGGACCAAGCAACACTCTCCCTGGCCGTG 121913568 29344 NM_013227.3(ACAN):c.7141G>A (p.Asp2381Asn) ACAN Jan 01, 2009 MedGen:C2748544,OMIM:612813,Orphanet:ORPHA171866 Spondyloepimetaphyseal dysplasia, Aggrecan type germline 15 88872038 GCCCAAGACTACCAGTGGATCGGCCTGAACGACAGGACCATCGAAGGGGACTTCCGCTGGT 1057520752 377842 NM_015629.3(PRPF31):c.855+1G>A PRPF31 May 22, 2015 MedGen:CN517202 not provided germline 19 54124657 CACAGTGACATCGTGCAGTCCCTGCCACCGGTGAGCCCACTGCGTCATGGCCCCTCCCCCG 1085307446 414475 NM_005869.3(CWC27):c.495G>A (p.Glu165=) CWC27 May 11, 2017 MedGen:C1855188,OMIM:250410,Orphanet:ORPHA166035 Retinitis pigmentosa with or without skeletal anomalies germline 5 64785579 ACATAATCCACACAAAATAAAAAGCTGTGAGGTAGGAGCATGATTATTACGAGATACAGCA -1 481791 NM_000162.4(GCK):c.208+1G>A GCK Jan 17, 2018 MedGen:CN517202 not provided germline 7 44153300 CCTACGTGCGCTCCACCCCAGAAGGCTCAGGTACCACATGGTAACCGGCTCCTCATCCAGA 587778831 132343 NM_000321.2(RB1):c.1216-1G>A RB1 Sep 16, 2013 Human Phenotype Ontology:HP:0009919,MeSH:D012175,MedGen:C0035335,OMIM:180200,Orphanet:ORPHA790 Retinoblastoma somatic 13 48376917 CGACATTGATTTCTGTTTTTACCTCCTAAAGAACTGCACAGTGAATCCAAAAGAAAGTATA 398122403 94413 NM_203446.2(SYNJ1):c.773G>A (p.Arg258Gln) SYNJ1 Nov 22, 2013 MedGen:C3809824,OMIM:615530 Parkinson disease 20, early-onset germline 21 32695106 GTGAACGAGCTGGGACCAGGTTTAATGTCCGGGGAACAAATGATGATGGTCATGTTGCCAA 587779683 107188 NM_000090.3(COL3A1):c.3544G>A (p.Gly1182Arg) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189008942 TACTCATTCTAGGGCTCCCCAGGCCACCCAGGGCAACCAGGCCCTCCTGGACCTCCTGGTG 397517342 55154 NM_022124.5(CDH23):c.5712G>A (p.Thr1904=) CDH23 Oct 10, 2011 MedGen:C1832845,OMIM:601067 Usher syndrome, type 1D germline 10 71785100 CCGCGAGCGGGCCTTCTTCATCAATGCCACGGTAGGGCCTAGACTGACCCCAGGGAGCTTC 113994122 15733 NM_001145320.1(ADAMTSL2):c.338G>A (p.Arg113His) ADAMTSL2 Apr 19, 2012 MedGen:C3278147,OMIM:231050,SNOMED CT:28557005 Geleophysic dysplasia 1 germline 9 133539799 AGGAGTGTCCGCCGGACGGGAGGAGCTTCCGCGAGGAGCAGTGCGTCTCCTTCAACTCCCA 573267388 362150 NM_015160.2(PMPCA):c.554G>A (p.Arg185Gln) PMPCA - MedGen:C1859298,OMIM:213200,Orphanet:ORPHA1170 Spinocerebellar ataxia, autosomal recessive 2 germline 9 136416312 CTCTTGCAGATGAAGAAGTCGAGATGACGCGGATGGCGGTCCAGTTTGAGCTGGAGGACCT 137852524 25034 NM_000425.4(L1CAM):c.1108G>A (p.Gly370Arg) L1CAM Jul 26, 2016 MedGen:C0795953,OMIM:303350,Orphanet:ORPHA2466;MedGen:CN517202 Spastic paraplegia 1;not provided germline X 153869818 CCCCAACCAGAGGTCACCTGGAGAATCAACGGGATCCCTGTGGAGGGTGAGCAGGGCCTCA 137852583 24875 NM_000044.4(AR):c.2164G>A (p.Ala722Thr) AR May 25, 1995 Human Phenotype Ontology:HP:0012125,MedGen:C0376358,OMIM:176807,SNOMED CT:399068003 Malignant tumor of prostate germline X 67711680 CAGCTTGTACACGTGGTCAAGTGGGCCAAGGCCTTGCCTGGTAAGGAAAAGGGAAGTGGGA 1085307823 415201 NM_033305.2(VPS13A):c.4956+1G>A VPS13A Mar 31, 2017 MedGen:CN517202 not provided germline 9 77317699 GATATGTCAGTAAAATCCCTGACACTAAAGGTAAATTAAAATATAATCATTTGAATATTTA 779748859 108167 NM_001847.3(COL4A6):c.1771G>A (p.Gly591Ser) COL4A6 Feb 01, 2014 MedGen:C3806737,OMIM:300914 Deafness, X-linked 6 germline X 108187279 TTTTCATTCTTTGTTTTATATGTTGTCTAGGGTGATGGTGGACAGGGCTTCCCAGGTGAAA 797045934 208589 NM_000540.2(RYR1):c.3381+1G>A RYR1 May 28, 2015 Human Phenotype Ontology:HP:0003198,MedGen:C0026848 Myopathy germline 19 38467813 GAGCTGGCCTATGTCTTCAATGGGCACCGCGTGGGTACCTCCCTGGGCACCATTCTGCCAG 72558447 103223 NM_000531.5(OTC):c.795G>A (p.Trp265Ter) OTC - MedGen:CN517202 not provided unknown X 38408953 TGGAGGCAATGTATTAATTACAGACACTTGGATAAGCATGGGACAAGAAGAGGAGAAGAAA 587782947 433561 NM_000138.4(FBN1):c.5783G>A (p.Cys1928Tyr) FBN1 May 05, 2017 MedGen:CN169374 not specified germline 15 48446711 ATGGTTTCATCCTTTCTCACAACAATGACTGTATAGGTGCGTGTGCAAAATTGTGCATCAG 121908280 16279 NM_032753.3(RAX2):c.260G>A (p.Arg87Gln) RAX2 May 15, 2004 MedGen:C3151060,OMIM:613757 Age-related macular degeneration 6 germline 19 3770916 ACCGCCGGGCCAAGTGGCGCCGCCAGGAGCGGCTGGAGTCAGGCTCGGGTGCCGTGGCAGC 72656332 32341 NM_000088.3(COL1A1):c.3559G>A (p.Gly1187Ser) COL1A1 Oct 03, 1997 MedGen:C0268360,OMIM:166210,SNOMED CT:86470003 Osteogenesis imperfecta, recessive perinatal lethal germline 17 50186895 CAGGGTCCCCCCGGCCCTCCTGGACCTCCTGGTCCCCCTGGTCCTCCCAGCGCTGGTTTCG 80338792 20959 NM_000334.4(SCN4A):c.3917G>A (p.Gly1306Glu) SCN4A Apr 18, 2017 MedGen:CN074266,OMIM:170500;MedGen:C0752355,OMIM:608390,Orphanet:ORPHA99734;MedGen:CN517202 Hyperkalemic Periodic Paralysis Type 1;Potassium aggravated myotonia;not provided germline 17 63943846 ACCTGACAAGCCCTATCCCACTATACTTAGGGGGGAAAGACATCTTTATGACGGAGGAACA 104895477 19740 NM_022162.2(NOD2):c.1147G>A (p.Glu383Lys) NOD2 Jun 01, 2005 MedGen:C1861303,OMIM:186580,Orphanet:ORPHA90340;MedGen:C1836122,OMIM:609464 Blau syndrome;Sarcoidosis, early-onset germline 16 50711058 CGTGTCCTGTTAACCTTTGATGGCTTTGACGAGTTCAAGTTCAGGTTCACGGATCGTGAAC 397516006 51862 NM_000256.3(MYBPC3):c.3233G>A (p.Trp1078Ter) MYBPC3 Mar 26, 2017 Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005 Hypertrophic cardiomyopathy;Primary familial hypertrophic cardiomyopathy germline 11 47333291 CTCCCCAGGATCTCCGGGTGACTGACGCCTGGGGTCTTAATGTGGCTCTGGAGTGGAAGCC 1085307180 414110 NM_001204.6(BMPR2):c.203G>A (p.Gly68Asp) BMPR2 - MedGen:C0152171,OMIM:178600,SNOMED CT:26174007 Primary pulmonary hypertension germline 2 202464935 TATTATGCTCGAAAGGTAGCACCTGCTATGGCCTTTGGGAGAAATCAAAAGGGGACATAAA 137853231 21111 NM_004260.3(RECQL4):c.806G>A (p.Trp269Ter) RECQL4 Nov 01, 2003 MedGen:C1849453,OMIM:266280,Orphanet:ORPHA3021 Rapadilino syndrome germline 8 144516313 GCGAGAAGCGGAGATGGAACGAGGAGCCCTGGGAGAGCCCCGCACAGGTCCAGCAGGAGAG 879255193 246601 NM_000527.4(LDLR):c.2390-1G>A LDLR Nov 05, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline;inherited 19 11129512 GCTGTGTGACAGAGCGTGCCTCTCCCTACAGTGCTCCTCGTCTTCCTTTGCCTGGGGGTCT 587779664 107160 NM_000090.3(COL3A1):c.2553+1G>A (p.Gly816_Ala851del) COL3A1 Nov 10, 2015 MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189003063 GCAGGACCCCCTGGAGGTTCTGGACCTGCTGTAAGTTCCTTCCTCTTTCTCTGTCTATCTA 140259402 39798 NM_018718.2(CEP41):c.536G>A (p.Arg179His) CEP41 Jan 15, 2012 MedGen:CN121473 Joubert syndrome 12/15, digenic germline 7 130402686 CTGACTGCCCCTTCCTGCTGCTAGATGTGCGTGATAGAGATTCTTACCAGCAGTGCCACAT 121434438 21898 NM_001106.3(ACVR2B):c.1480G>A (p.Val494Ile) ACVR2B Jan 01, 1999 MedGen:C3151057,OMIM:613751 Heterotaxy, visceral, 4, autosomal germline 3 38483273 TCGGTCAACGGCACTACCTCGGACTGTCTCGTTTCCCTGGTGACCTCTGTCACCAATGTGG 886037938 248794 NM_021912.4(GABRB3):c.358G>A (p.Asp120Asn) GABRB3 Sep 20, 2016 MedGen:C4310712,OMIM:617113 Epileptic encephalopathy, early infantile, 43 germline 15 26621417 AATCGAGTGGCTGACCAGCTATGGGTGCCCGACACATATTTCTTAAATGACAAAAAGTCAT 119103220 16960 NM_022132.4(MCCC2):c.464G>A (p.Arg155Gln) MCCC2 Feb 01, 2001 MedGen:C1859499,OMIM:210210 3-methylcrotonyl CoA carboxylase 2 deficiency germline 5 71602586 ACTACCCAGTGACTGTGAAAAAACAATTACGGGCCCAAGAAATTGCCATGCAAAACAGGCT 113994049 20984 NM_003907.2(EIF2B5):c.338G>A (p.Arg113His) EIF2B5 May 05, 2017 MedGen:C1858991,OMIM:603896,Orphanet:ORPHA99854;MedGen:C1847967,Orphanet:ORPHA99853;MedGen:CN517202 Leukoencephalopathy with vanishing white matter;Ovarioleukodystrophy;not provided germline 3 184137637 TCCCTTCCTTTAGGAAGTCAAAGTGGTGCCGCCCTACATCTCTCAATGTGGTTCGAATAAT 28936374 24108 NM_001876.3(CPT1A):c.2126G>A (p.Gly709Glu) CPT1A Mar 07, 2013 MedGen:C0342789,OMIM:255120,SNOMED CT:238001003 Carnitine palmitoyltransferase I deficiency germline 11 68760241 TGGAGAATAACCCAGAGTACGTGTCCAGCGGAGGGGGCTTTGGACCGGTGAGTGCGGCGGG 779103938 237358 NM_000497.3(CYP11B1):c.1331G>A (p.Gly444Asp) CYP11B1 Apr 01, 2015 MedGen:CN517202 not provided germline 8 142875024 CCGGCAGGAACTTCTACCACGTGCCCTTTGGCTTTGGCATGCGCCAGTGCCTTGGGCGGCG 61753266 27100 NM_000504.3(F10):c.424G>A (p.Glu142Lys) F10 Aug 01, 1995 MedGen:C0015519,OMIM:227600,Orphanet:ORPHA328,SNOMED CT:76642003 Factor X deficiency germline 13 113140972 GACAACGGGGACTGTGACCAGTTCTGCCACGAGGAACAGAACTCTGTGGTGTGCTCCTGCG 796052636 203775 NM_172107.3(KCNQ2):c.844G>A (p.Asp282Asn) KCNQ2 Jun 16, 2015 MedGen:CN517202 not provided germline 20 63439681 CAGATCACGCTGACCACCATTGGCTACGGGGACAAGTACCCCCAGACCTGGAACGGCAGGC 1060499793 389236 NM_022124.5(CDH23):c.3181G>A (p.Glu1061Lys) CDH23 Jun 04, 2016 MedGen:C1832394,OMIM:601386 Deafness, autosomal recessive 12 germline 10 71709172 GTTGTGAGAACCGTGGTGGGCCTGGACCGGGAGACCACAGCCGCCTACATGCTCATCCTGG 78655421 22148 NM_000492.3(CFTR):c.350G>A (p.Arg117His) CFTR Oct 31, 2017 MedGen:C0403814,OMIM:277180,Orphanet:ORPHA48;MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008;MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008;MedGen:C0238339,OMIM:167800,Orphanet:ORPHA676,SNOMED CT:68072000;MedGen:CN236562;MedGen:CN517202;MedGen:CN169374 Congenital bilateral absence of the vas deferens;Cystic fibrosis;Cystic fibrosis;Hereditary pancreatitis;ivacaftor response - Efficacy;not provided;not specified germline;maternal;paternal;unknown 7 117530975 CTTCCTATGACCCGGATAACAAGGAGGAACGCTCTATCGCGATTTATCTAGGCATAGGCTT 80356616 23706 NM_000525.3(KCNJ11):c.175G>A (p.Val59Met) KCNJ11 Apr 30, 2015 MedGen:C1833102;Human Phenotype Ontology:HP:0000857,MedGen:C3278636;MedGen:C1833104,OMIM:606176,Orphanet:ORPHA99885 Diabetes mellitus, permanent neonatal, with neurologic features;Neonatal insulin-dependent diabetes mellitus;Permanent neonatal diabetes mellitus germline 11 17387917 ATCCGGGAGCAGGGCCGCTTCCTGCAGGACGTGTTCACCACGCTGGTGGACCTCAAGTGGC 797045331 209219 NM_000052.6(ATP7A):c.1544-1G>A ATP7A Feb 08, 2013 MedGen:C0022716,OMIM:309400,Orphanet:ORPHA565,SNOMED CT:59178007 Menkes kinky-hair syndrome germline X 78003072 TCTGTATTGTTTTTCTTATCAATGCTCTTAGGAATATATTCTATACTTGTGGCCCTGATGG 137852512 25042 NM_000216.3(ANOS1):c.711G>A (p.Trp237Ter) ANOS1 Sep 01, 1992 MedGen:C1563719,OMIM:308700 Kallmann syndrome 1 germline X 8587809 CCATCCTAGCGAAGATGACGCCACTCACTGGCAGACAGTGGCCCAGGTAAGAACCTCATAT 397514680 50326 NM_006950.3(SYN1):c.1648G>A (p.Ala550Thr) SYN1 Apr 09, 2013 MedGen:C1845343,OMIM:300491,Orphanet:ORPHA85294 Epilepsy, X-linked, with variable learning disabilities and behavior disorders germline X 47574336 CCCGGGGCGCCTCCAGCAGCCCGCCCGCCCGCCTCTCCGTCTCCCCAGCGCCAGGCGGGCC 879255685 247683 NM_012062.4(DNM1L):c.1085G>A (p.Gly362Asp) DNM1L Oct 15, 2010 MedGen:C3280660,OMIM:614388,Orphanet:ORPHA330050 Encephalopathy due to defective mitochondrial and peroxisomal fission 1 germline 12 32731019 AACCATATACTTCATTGCCTTTCAGATGCGGTGGTGCTAGAATTTGTTATATTTTCCATGA 886039043 258466 NM_000238.3(KCNH2):c.1557+1G>A KCNH2 Jun 01, 2015 MedGen:CN230736 Cardiovascular phenotype germline 7 150952424 CTGCTCATCTTCGGCTCTGGCTCTGAGGAGGTGGGGTCAGCAAGGAGGCAGGTGGTGTAGG 121434474 24649 m.12147G>A MT-TH Apr 27, 2004 MedGen:C3151970 MERRF/MELAS overlap syndrome germline MT 12147 TCATTACCGGGTTTTCCTCTTGTAAATATAGTTTAACCAAAACATCAGATTGTGAATCTGA 121912807 32582 NM_000083.2(CLCN1):c.1495G>A (p.Gly499Arg) CLCN1 Jan 28, 2000 MedGen:C0751360,OMIM:255700,SNOMED CT:20305008 Congenital myotonia, autosomal recessive form germline 7 143339534 CCTCTAGGAGCTGCATTTGGAAGGCTGGTAGGAGAAATCATGGCCATGCTCTTTCCTGATG 111033736 18661 NM_000155.3(GALT):c.607G>A (p.Glu203Lys) GALT Apr 03, 2014 MedGen:C0268151,OMIM:230400,Orphanet:ORPHA79239,SNOMED CT:124354006 Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase germline 9 34648376 AGTTTCCTGCCAGATATTGCCCAGCGTGAGGAGCGATCTCAGCAGGCCTATAAGAGTCAGC 769651861 440065 NM_015650.3(TRAF3IP1):c.169G>A (p.Glu57Lys) TRAF3IP1 Jun 01, 2017 MedGen:C0024507,OMIM:263520,SNOMED CT:72922008 Short rib-polydactyly syndrome, Majewski type maternal 2 238325351 GGTTTCATGAAGGGCCTCTACACAGACGCCGAGATGAAGTCTGATAATGTGAAGGTGGGTT -1 446525 NM_005629.3(SLC6A8):c.263-1G>A SLC6A8 Sep 12, 2017 MedGen:CN517202 not provided germline X 153690374 CCCTGAGTCCACGCTGTGCCTCCACCCCCAGGTGTGTTCCTTATTCCCTACGTCCTGATCG 5030731 300240 NM_000521.3(HEXB):c.1082+5G>A HEXB Jun 19, 2017 MedGen:C0036161,OMIM:268800,Orphanet:ORPHA796,SNOMED CT:23849003 Sandhoff disease germline 5 74715695 GGAGATGAAGTGGAATTTAAATGTTGGTAAGATGATTCCTTAAAACCCCTTTAAAAAAAAA 72658143 413961 NM_000089.3(COL1A2):c.1801G>A (p.Gly601Ser) COL1A2 - MedGen:C0023931,OMIM:166200,SNOMED CT:385482004 Osteogenesis imperfecta type I unknown 7 94416441 CGCGGTCCCCCAGGTGAGAGTGGTGCTGCCGGTCCTACTGGTCCTATTGGAAGCCGAGGTC 587779553 107148 NM_000090.3(COL3A1):c.3490G>A (p.Gly1164Arg) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189008107 AGTGGACATCCAGGTCCCATTGGACCACCAGGGCCTCGAGGTAACAGAGGTGAAAGAGGAT 1085307172 414100 NM_001204.6(BMPR2):c.179G>A (p.Cys60Tyr) BMPR2 - MedGen:C0152171,OMIM:178600,SNOMED CT:26174007 Primary pulmonary hypertension germline 2 202464911 GAATCTCTCATGAAAATGGGACAATATTATGCTCGAAAGGTAGCACCTGCTATGGCCTTTG 397514667 49382 NM_001242.4(CD27):c.158G>A (p.Cys53Tyr) CD27 Mar 01, 2013 MedGen:C3554540,OMIM:615122 Lymphoproliferative syndrome 2 germline 12 6445445 TCCTCCCAGGAACATTCCTCGTGAAGGACTGTGACCAGCATAGAAAGGCTGCTCAGTGTGA 864321670 213762 NM_002860.3(ALDH18A1):c.755G>A (p.Arg252Gln) ALDH18A1 Aug 21, 2015 MedGen:C1832669,OMIM:601162,Orphanet:ORPHA100990 Spastic paraplegia 9 germline 10 95633012 GTGTTAAAGATAATGATAGCCTGGCTGCCCGACTGGCTGTGGAAATGAAAACTGATCTCTT 367543049 51272 NM_001100.3(ACTA1):c.143G>A (p.Gly48Asp) ACTA1 Apr 11, 2013 MedGen:C0546264,OMIM:255310,Orphanet:ORPHA2020,SNOMED CT:240084007 Congenital myopathy with fiber type disproportion not provided 1 229432867 GTGTCTCGGCTCTGCAGGGCGTCATGGTCGGTATGGGTCAGAAAGATTCCTACGTGGGCGA 121918659 27784 NM_000733.3(CD3E):c.176G>A (p.Trp59Ter) CD3E Feb 04, 2014 MedGen:C3810127,OMIM:615615 Immunodeficiency 18 germline 11 118312690 GCCCTCAGTATCCTGGATCTGAAATACTATGGCAACACAATGATAAAAACATAGGCGGTGA 121918302 19207 NM_014989.5(RIMS1):c.2459G>A (p.Arg820His) RIMS1 Mar 01, 2003 MedGen:C1863634,OMIM:603649 Cone-rod dystrophy 7 germline 6 72251007 ATCAAACTTTTGTCTATTCACATGTACATCGTAGAGATTTTAGAGAACGAATGTTAGAAAT 865990202 359265 NM_000350.2(ABCA4):c.1988G>A (p.Trp663Ter) ABCA4 Jul 19, 2016 MedGen:CN517202 not provided germline 1 94060709 GCTGTTTCCCTATCTTCATGGTGCTGGCATGGATCTACTCTGTCTCCATGACTGTGAAGAG 886041365 265150 NM_000444.5(PHEX):c.1806G>A (p.Trp602Ter) PHEX May 27, 2016 MedGen:CN517202 not provided germline X 22221650 ATATGATAAAAATGGAAACCTGGATCCTTGGTGGTCTACTGAATCAGAAGAAAAGTTTAAG 1057516041 353909 NM_001009944.2(PKD1):c.10583G>A (p.Trp3528Ter) PKD1 Aug 03, 2015 MedGen:C0085413,OMIM:173900,SNOMED CT:28728008 Polycystic kidney disease, adult type maternal 16 2094127 AGCTGGGGCCACCCAGCCCAGGCCTGAACTGGGAACAGCCCCAGGCAGCGAGGCTGTCCAG 137853283 166064 NM_000053.3(ATP7B):c.2336G>A (p.Trp779Ter) ATP7B Dec 06, 2016 MedGen:C0019202,OMIM:277900,Orphanet:ORPHA905,SNOMED CT:88518009;MedGen:CN169374 Wilson disease;not specified germline 13 51958330 TGCTCTTTGTGTTCATTGCCCTGGGCCGGTGGCTGGAACACTTGGCAAAGGTAACAGCAGC 104895298 103484 NM_000431.3(MVK):c.442G>A (p.Ala148Thr) MVK Apr 01, 2015 MedGen:C0398691,OMIM:260920,Orphanet:ORPHA343,SNOMED CT:234538002;MedGen:CN517202 Hyperimmunoglobulin D with periodic fever;not provided germline 12 109581465 CCCCCCGGGGCGGGCTTGGGCTCCAGCGCCGCCTACTCGGTGTGTCTGGCAGCAGCCCTCC 398124053 100675 NM_004006.2(DMD):c.7683G>A (p.Trp2561Ter) DMD Jul 08, 2014 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009;MedGen:C3668940,OMIM:302045;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Becker muscular dystrophy;Dilated cardiomyopathy 3B;Duchenne muscular dystrophy germline X 31679564 TATTCTAGTTGAAAGAATTCAGAATCAGTGGGATGAAGTACAAGAACACCTTCAGAACCGG 121909107 22300 NM_005251.2(FOXC2):c.362G>A (p.Arg121His) FOXC2 Sep 15, 2005 MedGen:C0265345,OMIM:153400,Orphanet:ORPHA33001,SNOMED CT:8634009 Distichiasis-lymphedema syndrome germline 16 86567697 AGAACAAGCAGGGCTGGCAGAACAGCATCCGCCACAACCTCTCGCTCAACGAGTGCTTCGT 794728553 197418 NM_000218.2(KCNQ1):c.343G>A (p.Glu115Lys) KCNQ1 Sep 10, 2013 MedGen:CN517202 not provided germline 11 2445441 CACGTCCAGGGCCGCGTCTACAACTTCCTCGAGCGTCCCACCGGCTGGAAATGCTTCGTTT 28940879 18829 NM_000372.4(TYR):c.164G>A (p.Cys55Tyr) TYR Mar 03, 2016 MedGen:C0268494,OMIM:203100,Orphanet:ORPHA79431,SNOMED CT:6483008;MedGen:CN517202 Tyrosinase-negative oculocutaneous albinism;not provided germline 11 89178117 CCTGTGGCCAGCTTTCAGGCAGAGGTTCCTGTCAGAATATCCTTCTGTCCAATGCACCACT 1057524547 378475 NM_000088.3(COL1A1):c.1930G>A (p.Gly644Ser) COL1A1 Jan 04, 2017 MedGen:CN517202 not provided germline 17 50192528 CTCCCTTCTTCCCCCATTTCCCACCTACAGGGTCTCCCTGGTCCTGCTGGTCCTCCAGGTG 769259446 424406 NM_003901.3(SGPL1):c.665G>A (p.Arg222Gln) SGPL1 Jul 21, 2017 MedGen:CN339707,OMIM:617575 NEPHROTIC SYNDROME 14 germline 10 70868394 AAAGCATACTGATGGCCTGCAAAGCATATCGGGATCTGGCCTTTGAGAAGGGGATCAAAAC 202247804 46959 NM_014252.3(SLC25A15):c.569G>A (p.Gly190Asp) SLC25A15 May 31, 2012 MedGen:C0268540,OMIM:238970,Orphanet:ORPHA415,SNOMED CT:30287008 Hyperornithinemia-hyperammonemia-homocitrullinuria syndrome not provided 13 40807410 AAGTACCAGGCTATTTCTTCTTCTTCGGTGGCTATGAACTGAGCCGGTCCTTTTTTGCATC 863223696 210567 NM_005120.2(MED12):c.4147G>A (p.Ala1383Thr) MED12 Jun 29, 2017 MedGen:C0220769,OMIM:305450,SNOMED CT:49984004;MedGen:CN517202 FG syndrome;not provided germline X 71132100 CAGGAGATGAACTCCCTCTTGGAGAACATCGCCAAGGCCACAATCGAGGTTTTCCAACAGT 79781594 36242 NM_020975.4(RET):c.1853G>A (p.Cys618Tyr) RET Aug 01, 2017 MedGen:C0027672,SNOMED CT:699346009;na;Human Phenotype Ontology:HP:0002865,MeSH:C536914,MedGen:C0238462,Orphanet:ORPHA1332,SNOMED CT:255032005;MeSH:D018761,MedGen:C0025267,OMIM:131100,Orphanet:ORPHA652,SNOMED CT:30664006;MedGen:CN073359,Orphanet:ORPHA653,SNOMED CT:61808009;MeSH:D018813,MedGen:C0025268,OMIM:171400,Orphanet:ORPHA247698,SNOMED CT:61808009;MeSH:D018814,MedGen:C0025269,OMIM:162300,Orphanet:ORPHA247709,SNOMED CT:6153000,SNOMED CT:61530001;MedGen:C1970712,OMIM:610755,Orphanet:ORPHA276152 Hereditary cancer-predisposing syndrome;MEN2A and FMTC;Medullary thyroid carcinoma;Multiple endocrine neoplasia, type 1;Multiple endocrine neoplasia, type 2;Multiple endocrine neoplasia, type 2a;Multiple endocrine neoplasia, type 2b;Multiple endocrine neoplasia, type 4 germline;somatic 10 43113649 CCTGCAACTGCTTCCCTGAGGAGGAGAAGTGCTTCTGCGAGCCCGAAGACATCCAGGGTGA 796052595 203395 NM_001193466.1(KANSL1):c.2203+1G>A KANSL1 Jan 27, 2014 MedGen:CN517202 not provided germline 17 46039701 AATTGGTCAGCTCCTTCCTAACAACAGCCAGTAAGTGTCAGGGAGCCGGGAAGTCCCCCAG 587777708 165725 NM_003990.4(PAX2):c.167G>A (p.Arg56Gln) PAX2 Sep 01, 2014 MedGen:C4014925,OMIM:616002 Focal segmental glomerulosclerosis 7 germline 10 100749869 ACCAGGGTGTGCGGCCCTGTGACATCTCCCGGCAGCTGCGGGTCAGCCACGGCTGTGTCAG 122460152 26562 NM_000047.2(ARSE):c.349G>A (p.Gly117Arg) ARSE Apr 07, 1995 MedGen:C1844853,OMIM:302950,Orphanet:ORPHA79345 Chondrodysplasia punctata 1, X-linked recessive germline X 2953224 AGCATTGGTTACCGTGTTCTTCAGTGGACCGGAGCATCTGGAGGTCTTCCAACAAATGAGA -1 444293 NM_017780.3(CHD7):c.3302G>A (p.Cys1101Tyr) CHD7 Aug 15, 2017 MedGen:CN517202 not provided germline 8 60823940 GTCCTGAGCTGCGGAATATTCCATGGCGCTGTGTAGTCATTGATGAAGCCCACAGGCTGAA 137852316 25409 NM_000402.4(G6PD):c.1268G>A (p.Arg423His) G6PD May 24, 2017 MedGen:C2720289,OMIM:300908,Orphanet:ORPHA466026;na;na;na Anemia, nonspherocytic hemolytic, due to G6PD deficiency;G6PD ANAHEIM;G6PD NASHVILLE;G6PD PORTICI germline X 154532676 AGCAGTGCAAGCGCAACGAGCTGGTGATCCGCGTGCAGCCCAACGAGGCCGTGTACACCAA 25404 51477 NM_000138.4(FBN1):c.247+1G>A FBN1 May 22, 2017 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:CN118826,Orphanet:ORPHA91387;MedGen:CN517202 Marfan syndrome;Marfan syndrome;Thoracic aortic aneurysm and aortic dissection;not provided germline 15 48613009 CCTTACCTGGCGGAAATCAGTGTATTGTCCGTAAGTAAATAGAAAACTTGTCATTCTGCAT 80358158 245056 NM_007294.3(BRCA1):c.135-1G>A BRCA1 Jun 13, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline 17 43106534 AAATTGTTCTTTCTTTCTTTATAATTTATAGATTTTGCATGCTGAAACTTCTCAACCAGAA 104893861 23129 NM_153426.2(PITX2):c.344G>A (p.Arg115His) PITX2 Jan 28, 2016 MedGen:C1842031,OMIM:137600;MedGen:CN517202 Iridogoniodysgenesis, dominant type;not provided germline 4 110621210 AGAGGAACCGCTACCCGGACATGTCCACACGCGAAGAAATCGCTGTGTGGACCAACCTTAC 756414548 200228 NM_052845.3(MMAB):c.569G>A (p.Arg190His) MMAB Nov 17, 2016 MedGen:C1855102,OMIM:251110,Orphanet:ORPHA79311;MedGen:CN517202 Methylmalonic aciduria cblB type;not provided germline 12 109561055 CGGCGCTGCATTTCTGCCGGGCCGTGTGCCGCCGGGCCGAGAGACGGTAAGAGGGCTGGAG 886041966 264272 NM_023073.3(CPLANE1):c.57G>A (p.Trp19Ter) CPLANE1 Sep 09, 2016 MedGen:CN517202 not provided germline 5 37247642 ATCAACAGGTATTAAGCAGAAAAAACCATGGCCACGTGTCTCCTGGTTGGGAAAGGTAGGT 587783993 168317 NM_133433.3(NIPBL):c.610+1G>A NIPBL Feb 08, 2013 MedGen:CN029798,OMIM:122470 Cornelia de Lange syndrome 1 germline 5 36962275 GTTACACAACACATCCACAGATGCAACAAGGTAAGAAAGTTGTTTGTAACTTCACTGGGAA -1 482131 NM_000267.3(NF1):c.6611G>A (p.Trp2204Ter) NF1 Dec 26, 2017 MedGen:CN517202 not provided germline 17 31337850 CATGCATGAGAGATATTCCAACGTGCAAGTGGCTGGACCAGTGGACAGAACTAGCTCAAAG 147708782 181566 NM_017534.5(MYH2):c.706G>A (p.Ala236Thr) MYH2 Jun 01, 2014 MedGen:C1854106,OMIM:605637 Inclusion body myopathy 3 germline 17 10543746 GCCAACCCCCTACTGGAGGCCTTTGGCAACGCCAAGACCGTGAGGAATGACAACTCCTCTC 727505013 176325 NM_001399.4(EDA):c.502+1G>A EDA Apr 22, 2015 Human Phenotype Ontology:HP:0007607,MedGen:C1706004,Orphanet:ORPHA238468 Hypohidrotic ectodermal dysplasia germline X 69957133 AAAGAAGCAAAAGCAATGAAGGAGCAGATGGTAAGTCTACTCAGTTGATCCTTTATCACTT 121917971 79415 NM_006920.4(SCN1A):c.2804G>A (p.Arg935His) SCN1A Jul 17, 2017 MedGen:C0393706,Orphanet:ORPHA1934;MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002;MedGen:CN517202 Early infantile epileptic encephalopathy;Severe myoclonic epilepsy in infancy;not provided germline;unknown 2 166037885 ACTTCTTCCACTCCTTCCTGATTGTGTTCCGCGTGCTGTGTGGGGAGTGGATAGAGACCAT 121912550 29873 NM_000883.3(IMPDH1):c.931G>A (p.Asp311Asn) IMPDH1 Jan 26, 2016 MedGen:C1867299,OMIM:180105;MedGen:CN517202 Retinitis pigmentosa 10;not provided germline 7 128398557 GATGAGCTGGTGGCCATCATCGCCCGCACCGACCTGAAGAAGAACCGAGACTACCCTCTGG 886039390 259647 NM_006147.3(IRF6):c.668-1G>A IRF6 Jun 10, 2015 MedGen:CN517202 not provided germline 1 209790888 AGGACTCTCACTGTCATCTCTAACCTTGCAGTGACTGACCTGGACATCAAGTTTCAGTACC -1 439485 NM_001284214.1(TRIP12):c.4928G>A (p.Arg1643Gln) TRIP12 Nov 06, 2017 MedGen:CN593636,OMIM:617752 MENTAL RETARDATION, AUTOSOMAL DOMINANT 49 germline 2 229785842 TTGTACTTTCTTTGTAGCGTACTGTGAACCGAGAGGAGCTGCTGAAACAGGCGGAGTCTGT 56030372 26648 NM_178151.2(DCX):c.587G>A (p.Arg196His) DCX Feb 08, 2013 Human Phenotype Ontology:HP:0002282,MedGen:C0008519;MedGen:C1848199,OMIM:300067,Orphanet:ORPHA2148;MedGen:C1848070 Heterotopia;Lissencephaly, X-linked;Subcortical laminar heterotopia, X-linked germline X 111401108 GCAGTGGGGTGAAGCCTCGGAAGGCTGTGCGTGTGCTTCTGAACAAGAAGACAGCCCACTC 62625011 27311 NM_000463.2(UGT1A1):c.923G>A (p.Gly308Glu) UGT1A1 Feb 01, 1994 MedGen:C0010324,OMIM:218800,Orphanet:ORPHA79234 Crigler Najjar syndrome, type 1 germline 2 233767092 GAGAACATGGAATTGTGGTTTTCTCTTTGGGATCAATGGTCTCAGAAATTCCAGAGAAGAA 559510809 186028 NM_000038.5(APC):c.1262G>A (p.Trp421Ter) APC Nov 18, 2014 MedGen:C2713442,OMIM:175100 Familial adenomatous polyposis 1 germline 5 112819294 AACAGATACGCGCTTACTGTGAAACCTGTTGGGAGTGGCAGGAAGCTCATGAACCAGGCAT 875989921 228169 NM_000527.4(LDLR):c.1448G>A (p.Trp483Ter) LDLR Mar 25, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11113624 TCCAGGCCCCCGACGGGCTGGCTGTGGACTGGATCCACAGCAACATCTACTGGACCGACTC -1 446290 NM_172107.3(KCNQ2):c.654G>A (p.Trp218Ter) KCNQ2 Sep 06, 2017 MedGen:CN517202 not provided germline 20 63444695 GATCCGCATGGACCGGCGGGGAGGCACCTGGAAGCTGCTGGGCTCTGTGGTCTATGCCCAC 1057518879 360800 NM_000302.3(PLOD1):c.1562G>A (p.Trp521Ter) PLOD1 Jun 15, 2015 Gene:101290499,Human Phenotype Ontology:HP:0001539,MedGen:C0795690,OMIM:164750,Orphanet:ORPHA660,SNOMED CT:18735004;Human Phenotype Ontology:HP:0005280,MedGen:C1836542;Human Phenotype Ontology:HP:0001290,MedGen:C1858120;Human Phenotype Ontology:HP:0000218,MedGen:C0240635;Human Phenotype Ontology:HP:0001382,MedGen:C1844820;Human Phenotype Ontology:HP:0002944,MedGen:C0749379 Congenital omphalocele;Depressed nasal bridge;Generalized hypotonia;High palate;Joint hypermobility;Thoracolumbar scoliosis unknown 1 11965571 ACCGCACCACCCACCTGCACAACGACCTCTGGGAGGTGTTCAGCAACCCCGAGGTGAGGCC 886041914 264616 NM_001844.4(COL2A1):c.2825G>A (p.Gly942Asp) COL2A1 Apr 21, 2017 MedGen:CN517202 not provided germline 12 47978667 GAGGAGACAGCGGCCCCCCTGGCCGAGCTGGTGAACCCGGCCTCCAAGGTCCTGCTGGACC 773173317 438535 NM_017807.3(OSGEP):c.740G>A (p.Arg247Gln) OSGEP Oct 30, 2017 MedGen:CN570505,OMIM:617729 GALLOWAY-MOWAT SYNDROME 3 germline 14 20447957 TGTTTGCAATGCTGGTAGAGATCACAGAGCGAGCCATGGCACATTGTGGCTCCCAGGAGGC -1 432104 NM_001145026.1(PTPRQ):c.6881G>A (p.Trp2294Ter) PTPRQ Sep 15, 2017 MedGen:CN461628,OMIM:617663 DEAFNESS, AUTOSOMAL DOMINANT 73 germline 12 80679004 TTTCTGTTATAGGTGATGTTGAGCTTGAATGGGAAGAAACCACTATGTAAATATTCAGACC 36053993 20333 NM_001128425.1(MUTYH):c.1187G>A (p.Gly396Asp) MUTYH Oct 26, 2017 MedGen:C0699790,OMIM:114500,SNOMED CT:269533000;MedGen:C4016911;Human Phenotype Ontology:HP:0012114,MedGen:C0476089,OMIM:608089,SNOMED CT:254878006;MedGen:C0027672,SNOMED CT:699346009;MedGen:C3272841;MedGen:C1837991,OMIM:608456,Orphanet:ORPHA247798;MedGen:C1837991,OMIM:608456,Orphanet:ORPHA247798;MedGen:C1837991,OMIM:608456,Orphanet:ORPHA247798;Human Phenotype Ontology:HP:0006753,MeSH:D013274,MedGen:C0038356,OMIM:613659,SNOMED CT:126824007;Human Phenotype Ontology:HP:0006753,MeSH:D013274,MedGen:C0038356,OMIM:613659,SNOMED CT:126824007;Human Phenotype Ontology:HP:0030434,MeSH:D018296,MedGen:C0206711,OMIM:132600,Orphanet:ORPHA91414;Human Phenotype Ontology:HP:0006722,MedGen:C1868072;MedGen:CN517202;MedGen:CN169374 Carcinoma of colon;Colorectal adenomatous polyposis, autosomal recessive, with pilomatricomas;Endometrial carcinoma;Hereditary cancer-predisposing syndrome;MUTYH-associated polyposis;MYH-associated polyposis;MYH-associated polyposis;MYH-associated polyposis;Neoplasm of stomach;Neoplasm of stomach;Pilomatrixoma;Small intestine carcinoid;not provided;not specified germline;unknown 1 45331556 TGACCCCTGCCTGGCTGCCCTCCCTCTCAGGTCTGCTGGCAGGACTGTGGGAGTTCCCGTC 104894122 22344 NM_004560.3(ROR2):c.2246G>A (p.Trp749Ter) ROR2 Mar 01, 2000 Human Phenotype Ontology:HP:0005831,MedGen:C1862112,OMIM:113000 Brachydactyly type B1 germline 9 91724248 TCAAGGACATCCACAGCCGGCTCCGAGCCTGGGGCAACCTTTCCAACTACAACAGCTCGGC 587779443 32242 NM_000090.3(COL3A1):c.1149+1G>A (p.Gly351_Pro383del) COL3A1 Apr 05, 2017 MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188993460 CAGGGACACGCTGGTGCTCAAGGTCCTCCTGTAAGTATCATAGTTGAGAGGGAGTAAGCAT 1801483 31198 NM_000160.4(GCGR):c.118G>A (p.Gly40Ser) GCGR Feb 01, 1996 Human Phenotype Ontology:HP:0005978,MedGen:C0011860,OMIM:125853,Orphanet:ORPHA181376,SNOMED CT:44054006 Diabetes mellitus type 2 germline 17 81809839 GACTTCCTGTTTGAGAAGTGGAAGCTCTACGGTGACCAGTGTCACCACAACCTGAGCCTGC 59513011 426834 NM_001171.5(ABCC6):c.3883-24G>A ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16155055 AAATGCCCACAAACCCTCTGGTCAGAGCAGGCCTTTCCTCCCAACCCCGGGCAGGTGGGCA 561449819 222924 NM_001001438.2(LSS):c.1762G>A (p.Gly588Ser) LSS Jan 17, 2017 MedGen:C4225300,OMIM:616509 Cataract 44 germline 21 46195731 TCCAGCTCCTGGGGAGTTTGCTTCACCTACGGCACCTGGTTTGGCCTGGAGGCCTTCGCCT -1 474340 NM_005732.3(RAD50):c.3050G>A (p.Trp1017Ter) RAD50 Nov 14, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 5 132616016 TTAATGTTTACCTTTAGATACAAGAAAGGTGGCTACAAGATAACCTTACTTTAAGAAAAAG 104886300 36114 NM_000495.4(COL4A5):c.4803G>A (p.Met1601Ile) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108694921 TTCTCTGTGGATTGGTTATTCCTTCATGATGGTATTTTACACTCTTCCTTGCATTTGTCAT 267607717 95503 NM_000249.3(MLH1):c.208-1G>A MLH1 Sep 05, 2013 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Lynch syndrome germline 3 37000954 ATTATTTACTCATCTTTTTGGTATCTAACAGAAAGAAGATCTGGATATTGTATGTGAAAGG 267606936 23808 NM_006204.3(PDE6C):c.2368G>A (p.Glu790Lys) PDE6C Nov 17, 2009 MedGen:C2751309 Achromatopsia 5 germline 10 93663028 ATGTAGTTTCTGACCTAAAATTCCTTTTAGGAGTTCTCACGGTTTCACAAAGAAATCACAC -1 441154 NM_000089.3(COL1A2):c.956G>A (p.Gly319Glu) COL1A2 Jun 16, 2017 MedGen:CN517202 not provided germline 7 94409742 TTCCTTCACAGGGCCTTCCCGGCGTTGCTGGGGCTCCCGGCCTCCCTGGACCCCGCGGTAT 80357418 70077 NM_007294.3(BRCA1):c.5136G>A (p.Trp1712Ter) BRCA1 Sep 01, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 1;Familial cancer of breast;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline 17 43063890 ATATTTTCTAGGAATTGCGGGAGGAAAATGGGTAGTTAGCTATTTCTGTAAGTATAATACT 199472814 67685 NM_000218.2(KCNQ1):c.1772G>A (p.Arg591His) KCNQ1 Jan 09, 2017 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MedGen:CN517202 Congenital long QT syndrome;not provided germline 11 2778015 AGGATCGCGGCAGCAACACGATCGGCGCCCGCCTGAACCGAGTAGAAGACAAGGTAGGCTC 63750342 94993 NM_000179.2(MSH6):c.426G>A (p.Trp142Ter) MSH6 Jul 24, 2014 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:C2936783,OMIM:120435 Lynch syndrome;Lynch syndrome I germline 2 47791092 GTTTTTTGATGACAGCCCAACAAGGGGCTGGGTTAGCAAAAGGCTTTTAAAGCCATATACA 397515605 76716 NM_194248.2(OTOF):c.5197G>A (p.Glu1733Lys) OTOF Apr 26, 2011 MedGen:C1832828,OMIM:601071 Deafness, autosomal recessive 9 not provided 2 26462177 AACCAGCCTTCTCTCCCTGGGCCCAGGTACGAGCTGCGGGTCATCATCTGGAACACAGATG 587782933 165527 NM_001167623.1(CACNA1C):c.1204G>A (p.Gly402Ser) CACNA1C Apr 11, 2017 MedGen:C2751898,OMIM:603829;MedGen:CN517202 Paroxysmal familial ventricular fibrillation 1;not provided germline 12 2504526 GGATCCTTTTTCGTTCTAAATCTGGTTCTCGGTGTGTTGAGCGGGTAAGCTGACCGTTTCT 794727481 193412 NM_000321.2(RB1):c.297G>A (p.Trp99Ter) RB1 Jul 29, 2016 MedGen:C0027672,SNOMED CT:699346009;Human Phenotype Ontology:HP:0009919,MeSH:D012175,MedGen:C0035335,OMIM:180200,Orphanet:ORPHA790 Hereditary cancer-predisposing syndrome;Retinoblastoma germline 13 48342631 AGGTTATATTCAAAAGAAAAAGGAACTGTGGGGAATCTGTATCTTTATTGCAGCAGTTGAC -1 446866 NM_138615.2(DHX30):c.2354G>A (p.Arg785His) DHX30 Dec 18, 2017 MedGen:CN703736,OMIM:617804 NEURODEVELOPMENTAL DISORDER WITH SEVERE MOTOR IMPAIRMENT AND ABSENT LANGUAGE germline 3 47848247 ATGTGATCCAGCGCCGGGGCCGGGCGGGCCGCTGCCAGTCCGGCTTTGCCTACCACTTGTT 869320675 204646 NM_015025.3(MYT1L):c.2636+1G>A MYT1L May 26, 2016 MedGen:C4225296,OMIM:616521;MedGen:CN517202 Mental retardation, autosomal dominant 39;not provided germline 2 1887487 GTGCAAGGAGAGCAAAAAGGACTTAATAACGTAAGCATGCTGTGAGGTGAAATTATGAATC 794728966 198066 NM_001103.3(ACTN2):c.2527-1G>A ACTN2 Sep 04, 2012 MedGen:CN517202 not provided germline 1 236762460 TGACTGCAAACACGTGTGTATTTTTTCCCAGCCATACATCCTGGCGGAGGAGCTGCGTCGG -1 488016 NM_000071.2(CBS):c.494G>A (p.Cys165Tyr) CBS Aug 24, 2017 Human Phenotype Ontology:HP:0002156,MedGen:C0019880 Homocystinuria germline 21 43065653 CCCTGGCTGCGGCAGTGAGGGGCTATCGCTGCATCATCGTGATGCCAGAGAAGATGAGCTC 68170503 103175 NM_000531.5(OTC):c.663+1G>A OTC - MedGen:CN517202 not provided unknown X 38403741 GGAATGCACCTTCAGGCAGCTACTCCAAAGGTAGGGAAACTTTTTGCCTTGAAACTAACCC 121908523 20683 NM_000030.2(AGXT):c.121G>A (p.Gly41Arg) AGXT Nov 27, 2014 MedGen:C0268164,OMIM:259900,Orphanet:ORPHA93598,SNOMED CT:65520001 Primary hyperoxaluria, type I germline 2 240868986 TCCAACCTGCCTCCTCGCATCATGGCAGCCGGGGGGCTGCAGATGATCGGGTCCATGAGCA 587784327 169799 NM_003560.3(PLA2G6):c.1117G>A (p.Gly373Arg) PLA2G6 Jul 15, 2014 MedGen:C0270724,OMIM:256600,Orphanet:ORPHA35069,SNOMED CT:52713000;Human Phenotype Ontology:HP:0012675,MedGen:C4021076 Infantile neuroaxonal dystrophy;Iron accumulation in brain germline 22 38129523 GTGGAGATGATCAAGGCCCTCATCGTGTTCGGAGCAGAAGTGGACACCCCGAATGACTTTG 57419521 22540 NM_002281.3(KRT81):c.1237G>A (p.Glu413Lys) KRT81 Dec 01, 1997 MedGen:C0546966,OMIM:158000,Orphanet:ORPHA573,SNOMED CT:69488000;MedGen:CN517202 Beaded hair;not provided germline 12 52287112 ATCGCCACCTACAGGCGCCTGCTGGAGGGCGAGGAGCAGAGGTGGGTCCAACCAAGGGTGG 587784142 168215 NM_022455.4(NSD1):c.5309G>A (p.Trp1770Ter) NSD1 Feb 08, 2013 MedGen:CN035106,OMIM:117550 Sotos syndrome 1 germline 5 177269607 TCCTTCTCCTTTTCACCTTTCCCAGGTGGTGGCCAGCTGAGATCTGCCATCCTCGAGCTGT 1057519350 362106 NM_182476.2(COQ6):c.763G>A (p.Gly255Arg) COQ6 Jun 07, 2016 MedGen:C3553349,OMIM:614650,Orphanet:ORPHA280406 Coenzyme Q10 deficiency, primary, 6 germline 14 73959204 AACGTAGCCTGGCAGAGATTTCTTCCCTCTGGGCCTATTGCTCTGCTCCCGGTAAGAGGTC -1 448069 NM_001195010.1(GRHL3):c.761G>A (p.Trp254Ter) GRHL3 Jun 26, 2017 MedGen:C1847604,OMIM:606713 Van der Woude syndrome 2 germline 1 24338050 AGAAGGTCCCAGTAGAGCAGCTGCGCTTCTGGAAGCACTGGCATTCCCGGCAACCCACTGC 121909598 31980 NM_006891.3(CRYGD):c.470G>A (p.Trp157Ter) CRYGD Sep 01, 2007 Human Phenotype Ontology:HP:0010926,MedGen:C1861832,OMIM:115700 Cataract 4 germline 2 208121728 TGCCAGGGGACTATAGGCGCTACCAGGACTGGGGGGCCACGAATGCCAGAGTGGGCTCTCT 121907903 408336 NM_024426.4(WT1):c.1385G>A (p.Arg462Gln) WT1 Jun 23, 2015 MedGen:CN517202 not provided germline 11 32392019 AGTGTAAAACTTGTCAGCGAAAGTTCTCCCGGTCCGACCACCTGAAGACCCACACCAGGAC 1049502301 260883 NM_012224.2(NEK1):c.214+1G>A NEK1 Jun 01, 2017 MedGen:C0085084,Orphanet:ORPHA98503,SNOMED CT:37340000;MedGen:C0024507,OMIM:263520,SNOMED CT:72922008 Motor neuron disease;Short rib-polydactyly syndrome, Majewski type paternal;unknown 4 169602007 ATATTGTCCAGTATAGAGAATCATTTGAAGGTCAGATAAATTATGCGAGAGAGTTAAAAAA 587777185 106809 NM_006702.4(PNPLA6):c.2375G>A (p.Gly792Glu) PNPLA6 Mar 04, 2014 MedGen:C2677586,OMIM:612020,Orphanet:ORPHA139480 Spastic paraplegia 39 germline 19 7554578 ACCCTAGCATCCAAGAGTTCCGGCTGTCAGGGTGGCTGGCCCAGCAGGAGGATGCACACCG 128626242 26288 NM_004006.2(DMD):c.1952G>A (p.Trp651Ter) DMD Jan 01, 1994 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Duchenne muscular dystrophy germline X 32565742 AAGCATGGCTGGATAACTTTGCCCGGTGTTGGGATAATTTAGTCCAAAAACTTGAAAAGAG 267607924 244372 NM_000251.2(MSH2):c.366+1G>A MSH2 Feb 16, 2017 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005;MedGen:CN517202 Lynch syndrome;not provided germline 2 47408556 AAGGAGAATGATTGGTATTTGGCATATAAGGTAATTATCTTCCTTTTTAATTTACTTATTT 397515487 77871 NM_005334.2(HCFC1):c.217G>A (p.Ala73Thr) HCFC1 Sep 05, 2013 MedGen:C0796208,OMIM:309541,Orphanet:ORPHA369962 Mental retardation 3, X-linked germline X 153964703 TCCCCAGCAACCAACCAGTGGTTCATCCCAGCCGTGAGGGGGGACATTCCCCCTGGGTGTG 77625743 15758 NM_001109809.2(ZFP57):c.743G>A (p.Arg248His) ZFP57 Aug 01, 2008 MedGen:C1832386,OMIM:601410,Orphanet:ORPHA99886 Transient neonatal diabetes mellitus 1 germline 6 29673368 AGACCTACTGTGATGCTTCTGGACTAAGTCGTCACCGCCGCGTCCATCTGGGTTACCGGCC 397514632 48558 NM_001256849.1(POLD1):c.1433G>A (p.Ser478Asn) POLD1 Jul 11, 2017 Gene:100271691,MedGen:C2675481,OMIM:612591 Colorectal cancer 10 germline;unknown 19 50406456 AGCTCCGCTCCTACACGCTCAATGCCGTGAGCTTCCACTTCCTGGGCGAGCAGAAGGAGGA 869312728 225899 NM_017671.4(FERMT1):c.1139+740G>A FERMT1 Jan 07, 2016 MedGen:C0406557,OMIM:173650,SNOMED CT:238835001,SNOMED CT:238836000 Kindler's syndrome germline 20 6094199 TTTATGGTTTGTTGACTTTTCTTAACCAACGGGCACTTCACTGGGGCAGTTGGCTTTAAAG 121913530 27623 NM_033360.3(KRAS):c.34G>A (p.Gly12Ser) KRAS Jul 14, 2015 MeSH:D015179,MedGen:CN236642;Human Phenotype Ontology:HP:0012209,MedGen:C0349639,OMIM:607785,Orphanet:ORPHA86834;Gene:6765,Human Phenotype Ontology:HP:0100615,MedGen:C0919267,OMIM:167000,SNOMED CT:123843001;Human Phenotype Ontology:HP:0006753,MeSH:D013274,MedGen:C0038356,OMIM:613659,SNOMED CT:126824007;Human Phenotype Ontology:HP:0100031,MeSH:D013964,MedGen:C0040136,Orphanet:ORPHA100087;Human Phenotype Ontology:HP:0030358,MeSH:D002289,MedGen:C0007131,SNOMED CT:254637007 Colorectal Neoplasms;Juvenile myelomonocytic leukemia;Neoplasm of ovary;Neoplasm of stomach;Neoplasm of the thyroid gland;Non-small cell lung cancer somatic 12 25245351 ACTGAATATAAACTTGTGGTAGTTGGAGCTGGTGGCGTAGGCAAGAGTGCCTTGACGATAC 869312880 226729 NM_022912.2(REEP1):c.595+1G>A REEP1 Jun 04, 2014 MedGen:C1853247,OMIM:610250,Orphanet:ORPHA101011 Spastic paraplegia 31, autosomal dominant germline 2 86232624 GGAGTGCTTCTGAGAGCGCTAGCAGCTCAGGTAGGTGTCACTTTACTTCCCCTCTTTCCCA 199476115 24756 m.5244G>A MT-ND2 Sep 19, 2013 Human Phenotype Ontology:HP:0001112,MedGen:C0917796,OMIM:535000,Orphanet:ORPHA104,SNOMED CT:58610003 Leber's optic atrophy germline MT 5244 CTCTCCCTAGGAGGCCTGCCCCCGCTAACCGGCTTTTTGCCCAAATGGGCCATTATCGAAG 66550389 103044 NM_000531.5(OTC):c.275G>A (p.Arg92Gln) OTC - MedGen:CN517202 not provided unknown X 38369854 TAGGCATGATTTTTGAGAAAAGAAGTACTCGAACAAGATTGTCTACAGAAACAGGTAAGTC 587776786 28123 NM_000321.2(RB1):c.2212-1G>A RB1 Nov 01, 1989 Human Phenotype Ontology:HP:0009919,MeSH:D012175,MedGen:C0035335,OMIM:180200,Orphanet:ORPHA790 Retinoblastoma somatic 13 48464997 TTTTTTTTTTTTTTTTACTGTTCTTCCTCAGACATTCAAACGTGTTTTGATCAAAGAAGAG 765430577 237474 NM_004826.3(ECEL1):c.1184G>A (p.Arg395Gln) ECEL1 Jan 08, 2013 MedGen:C3554415,OMIM:615065,Orphanet:ORPHA329457 Arthrogryposis, distal, type 5d inherited 2 232484472 TGTCGCAGCTCATCCGCTCCACACCCCACCGGTATGGCTGCAGATCTGGCATTTTCTGCCC 147118493 205138 NM_001298.2(CNGA3):c.101+1G>A CNGA3 Mar 15, 2016 MedGen:C1857618,OMIM:216900;MedGen:CN517202 Achromatopsia 2;not provided germline 2 98370077 TCTCAATCGCGCTGAAAATGGCCTCAGCAGGTAAGATGGGCTAAGATGGGCTTTTCATTTT 80358543 131539 NM_000059.3(BRCA2):c.2978G>A (p.Trp993Ter) BRCA2 Sep 08, 2016 MedGen:C2675520,OMIM:612555;MedGen:CN517202 Breast-ovarian cancer, familial 2;not provided germline 13 32337333 CAGAAAAAAATAATGATTACATGAACAAATGGGCAGGACTCTTAGGTCCAATTTCAAATCA 267606913 21057 NM_004553.4(NDUFS6):c.344G>A (p.Cys115Tyr) NDUFS6 Sep 01, 2009 MedGen:C1838979,OMIM:252010 Mitochondrial complex I deficiency germline 5 1815885 AAGAAACAAAAACCGGCACATGCGGTTACTGTGGGCTCCAGTTCAGACAGCACCACCACTA 794728652 419830 NM_130799.2(MEN1):c.783+1G>A MEN1 Nov 01, 2017 MedGen:C0027672,SNOMED CT:699346009;na;MedGen:CN169374 Hereditary cancer-predisposing syndrome;Metastatic pancreatic neuroendocrine tumours;not specified germline;somatic 11 64807551 GACTCGCTGGAGCTTCTGCAGCTGCAGCAGGTGAGGGCTGAGCCAATGGGGCAGGACTGGG 1114167282 243894 NM_001328664.1(ARHGAP29):c.2109+1G>A ARHGAP29 Mar 25, 2016 MedGen:C1861538 Nonsyndromic cleft lip with or without cleft palate germline 1 94184871 GAGATTGAAAATAGAGCTTTGTGTCTACAGGTACATTATAACTCTTAAAATTTTAAAAAGC 1057523689 380152 NM_003630.2(PEX3):c.991G>A (p.Gly331Arg) PEX3 Jul 20, 2017 MedGen:CN240842,OMIM:617370 Peroxisome biogenesis disorder 10b germline 6 143485201 CCTTTAGCTAAGATAATTCCAATAGTAAACGGACAGATCCATTCAGTTTGCAGTGAAACAC 121964891 27256 NM_000490.4(AVP):c.275G>A (p.Cys92Tyr) AVP Nov 01, 1998 Human Phenotype Ontology:HP:0000863,MedGen:C0687720,OMIM:125700,Orphanet:ORPHA178029,SNOMED CT:45369008 Neurohypophyseal diabetes insipidus germline 20 3083024 CGTCGCCCTGCCAGTCCGGCCAGAAGGCGTGCGGGAGCGGGGGCCGCTGCGCCGCCTTCGG 1057517933 359406 NM_024665.5(TBL1XR1):c.1108G>A (p.Asp370Asn) TBL1XR1 Oct 05, 2016 MedGen:CN517202 not provided germline 3 177038112 ACTGGCAATCTCTTGGCCTCCTGTTCTGACGACATGACTTTAAAGGTAATTTGCTTAGTAG 587777386 136551 NM_001615.3(ACTG2):c.119G>A (p.Arg40His) ACTG2 Aug 01, 2016 MedGen:C1835084,OMIM:155310,Orphanet:ORPHA2241 Visceral myopathy de novo;germline;maternal;paternal;unknown 2 73901430 CTGTCTTCCCCTCCATTGTGGGCCGCCCTCGCCACCAGGTGCGTGCTCATCTGGATACCAC 113994145 34074 NM_000920.3(PC):c.1892G>A (p.Arg631Gln) PC Sep 28, 2016 MedGen:C0034341,OMIM:266150,SNOMED CT:87694001;MedGen:CN517202 Pyruvate carboxylase deficiency;not provided germline 11 66851880 AGTGCCCCTGGCGGCGGCTGCAGGAGCTCCGGGAGCTCATCCCCAACATCCCTTTCCAGAT 121918662 27770 NM_198253.2(TERT):c.2080G>A (p.Val694Met) TERT May 10, 2012 Human Phenotype Ontology:HP:0001915,MedGen:C0002874,OMIM:609135,SNOMED CT:306058006;MedGen:C3553617,OMIM:614742 Aplastic anemia;Pulmonary fibrosis and/or bone marrow failure, telomere-related, 1 germline 5 1279341 GACGATATCCACAGGGCCTGGCGCACCTTCGTGCTGCGTGTGCGGGCCCAGGACCCGCCGC 267607795 186317 NM_000249.3(MLH1):c.791-1G>A MLH1 Aug 12, 2016 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Lynch syndrome germline 3 37017505 TTGAACTGGTTGCTTTCTTTTTATTGTTTAGATCGTCTGGTAGAATCAACTTCCTTGAGAA 587784185 168258 NM_022455.4(NSD1):c.6258+1G>A NSD1 Feb 08, 2013 MedGen:CN035106,OMIM:117550 Sotos syndrome 1 germline 5 177288926 TGCAGTGGCTTCTTGGGTGTAAGGCCAAAGGTACCACCCTTCTAGACTTCTGCTTTGGGAT 587779639 107117 NM_000090.3(COL3A1):c.3356G>A (p.Gly1119Asp) COL3A1 Jan 18, 2017 MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000;MedGen:CN517202 Ehlers-Danlos syndrome, type 4;not provided germline 2 189007600 GAGGATTCCCTGGTAATCCAGGTGCCCCAGGTTCTCCAGTAAGTGCATTCATTTTGTTGGA 587776752 26551 NM_001011658.3(TRAPPC2):c.93+5G>A TRAPPC2 Jun 01, 2001 MedGen:C0220776,OMIM:313400,SNOMED CT:51952004 Spondyloepiphyseal dysplasia tarda germline X 13719866 TGCCAGCTGGGAAGGCAGAATCCAAAGTACGTAAGAATTTTTATGCTATTGTAATGATATG 1060501410 396689 NM_000118.3(ENG):c.991G>A (p.Gly331Ser) ENG May 16, 2017 MedGen:C0039445,OMIM:187300,Orphanet:ORPHA774,SNOMED CT:21877004;MedGen:CN169374 Osler hemorrhagic telangiectasia syndrome;not specified germline 9 127824800 AGCATTGTCTCACTTCATGCCTCCAGCTGCGGTGAGCACCCTTCCCCTGCCCCTCCCTTCC 61750638 365228 NM_000350.2(ABCA4):c.5898+1G>A ABCA4 Sep 28, 2015 MedGen:CN517202 not provided germline 1 94008234 AGGCTGTGTGTCGGAGTTCGCCCTGGAGAGGTGGGTACTCTGCAGACCACGTGTGAAAGGC 28939089 103702 NM_003978.4(PSTPIP1):c.748G>A (p.Glu250Lys) PSTPIP1 Sep 06, 2015 MedGen:C1858361,OMIM:604416,Orphanet:ORPHA69126;MedGen:CN517202 Pyogenic arthritis, pyoderma gangrenosum and acne;not provided germline 15 77032304 GGCCTCTGCTCTTTCCTGCCCCAGCTCTACGAGGAAGTGCGGCTGACGCTGGAAGGCTGCA -1 481677 NM_145860.1(PDCD10):c.268+1G>A PDCD10 Jan 03, 2018 MedGen:CN517202 not provided germline 3 167697008 TTCTTCGTATGGCAGCTGATGATGTAGAAGGTAACGGACAGAAGAACCTTGTTTAAGTTAT 137852241 25630 NM_000133.3(F9):c.677G>A (p.Arg226Gln) F9 Jul 01, 1993 MedGen:CN043453 Hemophilia b(m) germline X 139551218 AAAGCACCCAATCATTTAATGACTTCACTCGGGTTGTTGGTGGAGAAGATGCCAAACCAGG 104894422 17045 NM_000231.2(SGCG):c.848G>A (p.Cys283Tyr) SGCG Mar 26, 2017 MedGen:C0410173,OMIM:253700,Orphanet:ORPHA353,SNOMED CT:240056002 Severe autosomal recessive muscular dystrophy of childhood - North African type germline 13 23324513 ACCTGTCTGTGGCCGGTGTGAGCACCACGTGCCAGGAGCACAACCACATCTGCCTCTGAGC 727503029 176783 NM_000501.3(ELN):c.1097-1G>A ELN Nov 29, 2013 Human Phenotype Ontology:HP:0004381,MedGen:C0003499,OMIM:185500,Orphanet:ORPHA3193,SNOMED CT:268185002 Supravalvar aortic stenosis germline 7 74054715 TGAGCATTTGTGTCCCTTTTGGTCTCTCCAGGGGTTGTGTCACCAGAAGCAGCTGCTAAGG 878853002 236980 NM_000342.3(SLC4A1):c.1825G>A (p.Gly609Arg) SLC4A1 May 18, 2015 MedGen:CN517202 not provided de novo 17 44255272 CCCCAGCTGCGTCGGGTCATCGGGGACTTCGGGGTCCCCATCTCCATCCTGATCATGGTCC 45517395 59092 NM_000548.4(TSC2):c.5138G>A (p.Arg1713His) TSC2 Aug 02, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1860707,OMIM:613254;MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Tuberous sclerosis 2;Tuberous sclerosis syndrome;not provided germline 16 2088117 TGTCTGACCGCAACCTGCCCTTCGTGGCCCGCCAGATGGCCCTGCACGCAAATGTGAGTGG 184953805 353892 NM_033629.4(TREX1):c.629G>A (p.Trp210Ter) TREX1 May 05, 2015 MedGen:C0796126,OMIM:225750 Aicardi Goutieres syndrome 1 paternal 3 48467284 ATGTCCTGGCCCTGCTCAGCATCTGTCAGTGGAGACCACAGGCCCTGCTGCGGTGGGTGGA 61754392 18831 NM_000372.4(TYR):c.1255G>A (p.Gly419Arg) TYR Feb 01, 1991 MedGen:C0268494,OMIM:203100,Orphanet:ORPHA79431,SNOMED CT:6483008;MedGen:CN517202 Tyrosinase-negative oculocutaneous albinism;not provided germline 11 89284843 GAAGTTTATCCAGAAGCCAATGCACCCATTGGACATAACCGGGAATCCTACATGGTTCCTT 397515588 76691 NM_194248.2(OTOF):c.1780G>A (p.Glu594Lys) OTOF Apr 26, 2011 MedGen:C1832828,OMIM:601071 Deafness, autosomal recessive 9 not provided 2 26480809 GAGCTCACCAGCTCCACAGAGGTGCAGGTGGAGCAGGCCACGCCCATCTCGGAGGTGAGAC 876658983 235205 NM_024675.3(PALB2):c.2693G>A (p.Trp898Ter) PALB2 Nov 15, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline 16 23626291 TAACTGCTTGCGAAGATGTAGTTTCTCTTTGGAAAGCTCTGGATGCTTGGCAGTGGGAAAA 45517218 409484 NM_000548.4(TSC2):c.2221-1G>A TSC2 Jul 25, 2016 MedGen:CN517202 not provided germline 16 2072848 GAGAGGTTTCATGCCTGGATTTGGTCATCAGCTTTCAGGCCCAAAGACACTGGAGCGGCTC 724159992 171753 NM_000663.4(ABAT):c.275G>A (p.Arg92Gln) ABAT Sep 11, 2017 MedGen:C0342708,OMIM:613163,Orphanet:ORPHA2066,SNOMED CT:237941007 Gamma-aminobutyric acid transaminase deficiency germline 16 8750498 GCAATTACCTGGTTGATGTGGACGGCAACCGAATGCTGGATCTTTATTCCCAGATCTCCTC 1064796893 410041 NM_004247.3(EFTUD2):c.2466+1G>A EFTUD2 Mar 16, 2017 MedGen:CN517202 not provided germline 17 44853516 AGGAGAGTCGTCTACTCTGCCTTCCTCATGGTAAGAGAATGGGGCGGTAGGGGACCATCTG -1 471871 NM_004006.2(DMD):c.186+1G>A DMD May 26, 2017 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Duchenne muscular dystrophy germline X 32849727 CTCCTCGAAGGCCTGACAGGGCAAAAACTGGTATGTGACTTATTTTTAAGAAAGTTAACTT 587783823 169955 NM_000252.2(MTM1):c.3G>A (p.Met1Ile) MTM1 Feb 08, 2013 MedGen:C0410203,OMIM:310400,Orphanet:ORPHA596,SNOMED CT:46804001 Severe X-linked myotubular myopathy germline X 150592617 TGTTGTGTTTCTTGGTAGAGTTTCCAGGATGGCTTCTGCATCAACTTCTAAATATAATTCA 104893751 22641 NM_016828.2(OGG1):c.137G>A (p.Arg46Gln) OGG1 Sep 01, 2000 Human Phenotype Ontology:HP:0006770,MedGen:C0279702,Orphanet:ORPHA319276,SNOMED CT:188251003,SNOMED CT:254915003 Clear cell carcinoma of kidney somatic 3 9750423 ACCTGGTTCTGCCTTCTGGACAATCTTTCCGGTGAGTGACTGAGCCTGAGAAGCCTGTCCC 121918218 16385 NM_138959.2(VANGL1):c.715G>A (p.Val239Ile) VANGL1 Sep 23, 2016 MedGen:C0300948;MedGen:CN517202 Caudal regression syndrome;not provided germline;unknown 1 115664171 GCCCTCCTCTTCATCCATTACCTGGCCATCGTCCTGCTGGAGCTCAGGCAGCTGCAGCCCA 75549581 22162 NM_000492.3(CFTR):c.1675G>A (p.Ala559Thr) CFTR Sep 26, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008;MedGen:C0238339,OMIM:167800,Orphanet:ORPHA676,SNOMED CT:68072000;MedGen:CN517202 Cystic fibrosis;Hereditary pancreatitis;not provided germline;unknown 7 117587829 AGTGGAGGTCAACGAGCAAGAATTTCTTTAGCAAGGTGAATAACTAATTATTGGTCTAGCA 398124381 101961 NM_022455.4(NSD1):c.6463+1G>A NSD1 Jun 10, 2013 MedGen:CN035106,OMIM:117550 Sotos syndrome 1 germline 5 177292159 ACTGTCTCAATCTGACCAAGCGACCAGCAGGTTGGTGCCAAAATCCATTTGTACCGCTACT 62516152 108520 NM_000277.2(PAH):c.688G>A (p.Val230Ile) PAH Aug 04, 2017 MedGen:C0031485,OMIM:261600,Orphanet:ORPHA716,SNOMED CT:154735006;MedGen:CN517202 Phenylketonuria;not provided germline;unknown 12 102855154 CATGAAGATAACATTCCCCAGCTGGAAGACGTTTCTCAGTTCCTGCAGAGTAAGTCCACAT 571517554 181280 NM_032415.5(CARD11):c.368G>A (p.Gly123Asp) CARD11 Feb 25, 2015 MedGen:CN231446,OMIM:616452 B-cell expansion with NFKB and T-cell anergy germline 7 2944528 CTGGGTGCCCCCTCTCCACAGTGGAGGAAGGCCACGAGGGCCTCACGCACTTCCTGATGAA 121908605 21148 NM_004531.4(MOCS2):c.502G>A (p.Glu168Lys) MOCS2 Jul 11, 2003 MedGen:C1854989,OMIM:252160,Orphanet:ORPHA308393 Molybdenum cofactor deficiency, complementation group B germline 5 53098667 TTTAATACCTGTTATGATTTTGTTTTTTAGGAAATATACGAAGAGTCATCAACTTGGAAAG 606231296 167523 NM_006254.3(PRKCD):c.1528G>A (p.Gly510Ser) PRKCD Aug 01, 2013 MedGen:C3809928,OMIM:615559 Autoimmune lymphoproliferative syndrome, type III germline 3 53188832 TTCGGGGAGAGCCGGGCCAGCACCTTCTGCGGCACCCCTGACTATATCGCCCCTGAGGTGA 1057519023 243941 NG_051105.1:g.97864G>A MME Jul 06, 2016 MedGen:C4015635,OMIM:617017 Charcot-Marie-Tooth disease, axonal, type 2T germline 3 155116987 GATAAGAATTCTGTGAATCATGTAATTCATGTAAGTTTGTGTGTCAAATAACTAAAGTTAC 121918708 27607 NM_001128177.1(THRB):c.1148G>A (p.Arg383His) THRB Sep 01, 1999 MedGen:C2937288,OMIM:188570 Thyroid hormone resistance, generalized, autosomal dominant germline 3 24123122 AATGTCCATCTTCTCTCTTCCCCGCAGATCGCCCGGGGCTTGCCTGTGTTGAGAGAATAGA 62645894 360557 NM_000330.3(RS1):c.208G>A (p.Gly70Ser) RS1 Jan 04, 2016 MedGen:CN517202 not provided germline X 18647309 TTCCCAGAATGCCCATATCACAAGCCTCTGGGTTTCGAGTCAGGGGAGGTCACACCGGACC 544312701 48042 NR_023343.1(RNU4ATAC):n.124G>A RNU4ATAC Jan 07, 2013 MedGen:C1859452,OMIM:210710,SNOMED CT:254102008 Osteodysplastic primordial dwarfism, type 1 germline 2 121531003 AGCTTTTGCTTTATTTTGGTGCAATTTTTGGAAAAATGAAAACCTGTTTTCATAGACTTAT -1 456216 NM_138694.3(PKHD1):c.11612G>A (p.Trp3871Ter) PKHD1 May 10, 2017 MedGen:C0085548,OMIM:263200,Orphanet:ORPHA731,SNOMED CT:28770003 Autosomal recessive polycystic kidney disease germline 6 51632618 TGGCTGCTTCCCTGTCCTCTGTGGCCTCATGGCTGGCTCTGAGCTGTCTGGTGTGCTGTTG 777566074 427083 NM_001171.5(ABCC6):c.191G>A (p.Arg64Gln) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16221677 TCATCCACCACCATGGCCGGGGCTACCTCCGGATGTCCCCACTCTTCAAAGCCAAGATGGT 193302910 222916 NM_000202.7(IDS):c.401G>A (p.Gly134Glu) IDS Feb 26, 2008 MedGen:C0026705,OMIM:309900,SNOMED CT:70737009 Mucopolysaccharidosis, MPS-II maternal X 149503329 AGGAGAATGGCTATGTGACCATGTCGGTGGGAAAAGTCTTTCACCCTGGTACTGCTCCATG 121912917 32255 NM_000090.3(COL3A1):c.3554G>A (p.Gly1185Asp) COL3A1 Aug 12, 2016 MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000;MedGen:CN517202 Ehlers-Danlos syndrome, type 4;not provided germline 2 189008952 AGGGCTCCCCAGGCCACCCAGGGCAACCAGGCCCTCCTGGACCTCCTGGTGCCCCTGGTCC 121909654 31304 NM_182925.4(FLT4):c.2632G>A (p.Val878Met) FLT4 Oct 01, 2006 MedGen:C1704423,OMIM:153100,Orphanet:ORPHA79452,SNOMED CT:399889006 Hereditary lymphedema type I germline 5 180619680 CACAAGGGCAGCAGCTGTGACACCGTGGCCGTGAAAATGCTGAAAGGTGTGGGGTCAGCGG -1 424468 NM_172079.2(CAMK2B):c.328G>A (p.Glu110Lys) CAMK2B Dec 08, 2017 Human Phenotype Ontology:HP:0001249,MedGen:C1843367;MedGen:CN679648,OMIM:617799 Intellectual disability;MENTAL RETARDATION, AUTOSOMAL DOMINANT 54 de novo;germline 7 44254555 GAAGACATTGTGGCGAGAGAGTACTACAGCGAGGCTGATGCCAGGTGGGTGCAGAGCCCTC 387906478 25640 NM_000133.3(F9):c.697G>A (p.Ala233Thr) F9 Sep 01, 1989 MedGen:C0008533,OMIM:306900,Orphanet:ORPHA98879,SNOMED CT:41788008 Hereditary factor IX deficiency disease germline X 139551238 GACTTCACTCGGGTTGTTGGTGGAGAAGATGCCAAACCAGGTCAATTCCCTTGGCAGGTAC 28937316 24408 NM_198056.2(SCN5A):c.4931G>A (p.Arg1644His) SCN5A Apr 05, 2017 MedGen:C1142166,Orphanet:ORPHA130,SNOMED CT:418818005;MedGen:CN230736;MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MedGen:C1859062,OMIM:603830;MedGen:CN517202 Brugada syndrome;Cardiovascular phenotype;Congenital long QT syndrome;Long QT syndrome 3;not provided germline 3 38551441 TCAGACTGATCCGAGGGGCCAAGGGGATCCGCACGCTGCTCTTTGCCCTCATGATGTCCCT 28940568 17895 NM_173076.2(ABCA12):c.4951G>A (p.Gly1651Ser) ABCA12 Sep 15, 2003 MedGen:C1832550,OMIM:601277 Autosomal recessive congenital ichthyosis 4A germline 2 214978830 GGCATGGGTGACCTCAACATCGGGTGCTACGGCATTTCAGATACCACCGTGGAGGAGGTAT 374742590 266536 NM_016239.3(MYO15A):c.3866+1G>A MYO15A Aug 27, 2015 MedGen:C1838263,OMIM:600316 Deafness, autosomal recessive 3 germline 17 18126457 CAACGGACGGGCCCTGGGAGAGAATCCCCCGTGAGTGTCTCGGGGGCGCTGCCCTGGGGTC 113993984 34184 NM_002863.4(PYGL):c.2017G>A (p.Glu673Lys) PYGL May 17, 2011 MedGen:C0017925,OMIM:232700,Orphanet:ORPHA369,SNOMED CT:237971004,SNOMED CT:29291001 Glycogen storage disease, type VI not provided 14 50910055 CTGTCAGAGCAGATTTCCACTGCAGGCACCGAAGCCTCGGGGACAGGCAATATGAAGTTCA 5907 29991 NM_000185.3(SERPIND1):c.623G>A (p.Arg208His) SERPIND1 Mar 25, 1989 MedGen:C0398626,OMIM:612356,SNOMED CT:234468009 Heparin cofactor II deficiency germline 22 20779935 TTCATAATCTCTTCCGTAAGCTGACTCATCGCCTCTTCAGGAGGAATTTTGGGTACACACT 1057518701 361265 NM_000451.3(SHOX):c.544+1G>A SHOX Mar 13, 2015 MedGen:C1845118,OMIM:300582,Orphanet:ORPHA314795 Short stature, idiopathic, X-linked paternal X 640879 GCCGCAAACAAGAGAATCAGATGCATAAAGGTGGGTGTCGGGACTGGGGGGACCTGAAGCT 72651661 413998 NM_000088.3(COL1A1):c.2335G>A (p.Gly779Ser) COL1A1 - MedGen:C0268363,OMIM:166220,Orphanet:ORPHA216820,SNOMED CT:205497004 Osteogenesis imperfecta with normal sclerae, dominant form unknown 17 50190825 ATTGGTCCTCCTGGCCCTGCTGGTGCCCCTGGTGACAAGGTGAGGTGGCCGCCTCCCCACC 281865424 32635 NM_000550.2(TYRP1):c.1067G>A (p.Arg356Gln) TYRP1 Jun 01, 2006 MedGen:C1859932,OMIM:203290 Oculocutaneous albinism type 3 germline 9 12702424 CTTTTTATTCCAACTCTACAAACAGTTTCCGAAACACAGTGGAAGGCAAGTAAATGAAATC 387907221 44196 NM_018475.4(TMEM165):c.377G>A (p.Arg126His) TMEM165 Jul 18, 2012 MedGen:C3553571,OMIM:614727,Orphanet:ORPHA314667 Congenital disorder of glycosylation type 2k germline 4 55411783 TAGCAGCCATCATGGCAATGCGCTATAACCGCCTGACCGTGCTGGCTGGTGCAATGCTTGC 879254824 246037 NM_000527.4(LDLR):c.1187-1G>A LDLR Mar 30, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11113277 GACCCCCTGACCTCGCTCCCCGGACCCCCAGGCTCCATCGCCTACCTCTTCTTCACCAACC 45506396 58550 NM_000548.4(TSC2):c.849-1G>A TSC2 Apr 14, 2015 MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000;MedGen:CN517202 Tuberous sclerosis syndrome;not provided germline 16 2058746 CACATTCCGTCTCTCTGGGGAACACTTTTAGAGCCTACATGGAGGACGCGCCCCTGCTGAG 104894800 26524 NM_006579.2(EBP):c.238G>A (p.Glu80Lys) EBP Feb 08, 2013 MedGen:C0282102,OMIM:302960,Orphanet:ORPHA35173 Chondrodysplasia punctata 2 X-linked dominant germline X 48524009 GCAGTGTGTGGGTTCATTCACCTGGTGATCGAGGGCTGGTTCGTTCTCTACTACGAAGACC 387907083 39994 NM_001083961.1(WDR62):c.1531G>A (p.Asp511Asn) WDR62 Nov 01, 2010 MedGen:C1858535,OMIM:604317 Primary autosomal recessive microcephaly 2 germline 19 36083222 AGTCCTGACGGCCAGCATTTGGCTTCAGGCGACCGAAGTGGAAATCTGAGGCAAGTGGGCC 774455945 247170 NM_002250.2(KCNN4):c.1055G>A (p.Arg352His) KCNN4 Dec 11, 2015 MedGen:C4225242,OMIM:616689;MedGen:CN517202 Dehydrated hereditary stomatocytosis 2;not provided germline;unknown 19 43769027 ACTGACTCCCCACTTCTTCCCACAGGTTCCGCCAGGTGCGGCTGAAACACCGGAAGCTCCG 113994208 34292 NM_004937.2(CTNS):c.613G>A (p.Asp205Asn) CTNS Jul 05, 2017 MedGen:CN035091,Orphanet:ORPHA213,SNOMED CT:190681003;MedGen:C0010690,OMIM:219800 Cystinosis;Nephropathic cystinosis germline 17 3656727 CCCAACGGAGTGAACCCCGTGAACAGCAACGACGTCTTCTTCAGCCTGCACGCGGTTGTCC 796051959 200074 NM_004453.3(ETFDH):c.1073G>A (p.Arg358Lys) ETFDH Feb 04, 2013 MedGen:CN517202 not provided germline 4 158699087 GCATTCGGCCAACCTTGGAAGGTGGAAAAAGGATTGCATACGGAGCCAGAGCTCTCAATGA 104894381 23033 NM_000192.3(TBX5):c.238G>A (p.Gly80Arg) TBX5 Mar 16, 1999 MedGen:C0265264,OMIM:142900,SNOMED CT:19092004 Holt-Oram syndrome germline 12 114401830 GTGGGCACGGAAATGATCATAACCAAGGCTGGAAGGTGAGATGGTTTGTTGTGTAGAGAGA 875989828 204406 NM_014722.4(RIPOR2):c.102-1G>A RIPOR2 Jul 08, 2014 MedGen:C4225298,OMIM:616515 Deafness, autosomal recessive 104 germline 6 24873800 ATCCTCACAATTTCTTCTGTTCTTTCCATAGGTGTAACTCCTTCATTGAAAATTCCTCCGC -1 442139 NM_000435.2(NOTCH3):c.1646G>A (p.Cys549Tyr) NOTCH3 Dec 29, 2016 MedGen:CN517202 not provided germline 19 15187299 GCACGCTGTGTGATCGCAACGTGGACGACTGCTCCCCTGACCCATGCCACCATGGTCGCTG -1 455181 NM_133433.3(NIPBL):c.6589+5G>A NIPBL Feb 06, 2017 MedGen:CN029798,OMIM:122470 Cornelia de Lange syndrome 1 germline 5 37046204 ACAAACAAAAGCTATCATTGGTCTAGGTAAGTCTAAATTTCTTTATAATTTGTAGCTATTT 974377052 444887 NM_030813.5(CLPB):c.963+1G>A CLPB Nov 11, 2015 MedGen:CN517202 not provided germline 11 72329706 ATGAAGCTTCTGAGGACTTCTGAAGCCAAGGTAAGTCTCAGGGAAGGGAGGAGGCCTGTGG 267606670 27954 NM_152296.4(ATP1A3):c.2767G>A (p.Asp923Asn) ATP1A3 Jul 23, 2015 MedGen:C3553788,OMIM:614820;MedGen:C1868681,OMIM:128235,Orphanet:ORPHA71517 Alternating hemiplegia of childhood 2;Dystonia 12 germline 19 41968837 TTTGTGAGCATCGTTGTCGTCCAGTGGGCCGATCTGATCATCTGCAAGACCCGGAGGAACT 1114167731 419447 NM_000179.2(MSH6):c.1115G>A (p.Trp372Ter) MSH6 Jul 31, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 2 47799098 CTACTGTTTGGTATCATGAAACTTTAGAATGGCTTAAGGAGGAAAAGAGAAGAGATGAGCA 121908435 20616 NM_014112.4(TRPS1):c.2762G>A (p.Arg921Gln) TRPS1 Jan 24, 2017 MedGen:C0432233,OMIM:190350,SNOMED CT:254091006;MedGen:C1860823,OMIM:190351 Trichorhinophalangeal dysplasia type I;Trichorhinophalangeal syndrome type 3 germline 8 115418391 ATTGCCTGACCACAAAGACCTCTCTCTGGCGAAAGAATGCAAATGGCGGATATGTATGCAA 515726188 136336 NM_015713.4(RRM2B):c.391G>A (p.Glu131Lys) RRM2B Apr 17, 2014 MedGen:CN187502 RRM2B-related mitochondrial disease germline 8 102224949 CGCTGTTTCTATGGCTTTCAAATTCTCATCGAGAATGTTCACTCAGAGATGTACAGTTTGC 146645381 45824 NM_178497.3(C4orf26):c.318G>A ODAPH Sep 07, 2012 MedGen:C3553830,OMIM:614832 Amelogenesis imperfecta, hypomaturation type IIA4 germline 4 75564364 CCACCGTTTTCCATTCCAGCCATTTTATTGGCCACACCGTTACCTTACTTATAGGTATTTC 1064793933 406684 NM_000806.5(GABRA1):c.752G>A (p.Gly251Asp) GABRA1 Aug 10, 2015 MedGen:CN517202 not provided germline 5 161890946 CCACTCATTTCCACTTGAAGAGAAAGATTGGCTACTTTGTTATTCAAACATACCTGCCATG 879255049 246367 NM_000527.4(LDLR):c.1845+1G>A LDLR Mar 30, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline;inherited;not applicable 19 11116999 GCCCACCCCTTCTCCTTGGCCGTCTTTGAGGTGTGGCTTACGTACGAGATGCAAGCACTTA 121913157 29748 NM_000208.3(INSR):c.3540G>A (p.Met1180Ile) INSR Jun 07, 1994 Human Phenotype Ontology:HP:0000855,MedGen:C0021655 Insulin resistance germline 19 7120739 TGAACCTTTTGTGTTGTCAGACTTTGGAATGACCAGAGACATCTATGAAACGGATTACTAC 369552114 266731 NM_000070.2(CAPN3):c.1993-1G>A CAPN3 Nov 02, 2016 MedGen:C1869123,OMIM:253600,Orphanet:ORPHA267;MedGen:CN517202 Limb-girdle muscular dystrophy, type 2A;not provided germline;unknown 15 42409786 AACCATGACCCTCCTCTCCCTTCCTCCTCAGGACATGGAGATCTGTGCAGATGAGCTCAAG 1057519351 362108 NM_182476.2(COQ6):c.1341G>A (p.Trp447Ter) COQ6 Jun 07, 2016 MedGen:C3553349,OMIM:614650,Orphanet:ORPHA280406 Coenzyme Q10 deficiency, primary, 6 germline 14 73961867 TGCCTCCCCGCTTGTGTTGCTCAGGACGTGGGGCTTGCAGGCCACAAATGCAGTGTCTCCA 137852548 24966 NM_002637.3(PHKA1):c.667G>A (p.Gly223Arg) PHKA1 May 13, 2008 MedGen:C1845151,OMIM:300559,Orphanet:ORPHA715 Glycogen storage disease IXd germline X 72667425 GATGAACTGGATCTGTTTGGTGTGAAAGGTGGGCCTCAATCAGTTATCCATGTCCTGGCTG 121907933 18475 NM_024105.3(ALG12):c.301G>A (p.Gly101Arg) ALG12 Jun 15, 2007 MedGen:C2931001,OMIM:607143,Orphanet:ORPHA79324,SNOMED CT:711155008 ALG12-congenital disorder of glycosylation germline 22 49910602 AGGTGCTGTCACTGTCTTTGTTTAGTTAGAGGAGTGCTTGGACTCGGCGTGATTTTTGGAC 386834230 97386 NM_000693.3(ALDH1A3):c.211G>A (p.Val71Met) ALDH1A3 - MedGen:CN517202 not provided inherited 15 100887578 CTCTCTGTTGTTCTGGTCGCTCAGCCCGACGTGGACAAGGCTGTGGAGGCTGCACAGGTTG 281875186 38969 NM_003070.4(SMARCA2):c.3485G>A (p.Arg1162His) SMARCA2 Jun 09, 2016 MedGen:C1303073,OMIM:601358,Orphanet:ORPHA3051,SNOMED CT:401046009;MedGen:CN517202 Nicolaides-Baraitser syndrome;not provided de novo;germline 9 2115850 AGGATCTGCAGGCCCAAGACCGAGCTCACCGCATCGGGCAGCAGAACGAGGTCCGGGTACT 121917836 28252 NM_003018.3(SFTPC):c.196G>A (p.Glu66Lys) SFTPC Jan 01, 2005 MedGen:C1970470,OMIM:610913 Surfactant metabolism dysfunction, pulmonary, 2 germline 8 22162727 ATGGGTCTCCACATGAGCCAGAAACACACGGAGATGGTGAGAGGTGTGGGATGCACAGCAG -1 432424 NM_001127899.3(CLCN5):c.1676G>A (p.Trp559Ter) CLCN5 Oct 28, 2013 MedGen:C1848336,OMIM:300009 Dent disease 1 maternal X 50088816 ACCACCAGGAATGGACCGTCTTCAATAGCTGGTGTAGTCAGGGAGCTGATTGCATCACCCC 281865089 33950 NM_000195.4(HPS1):c.1749G>A (p.Trp583Ter) HPS1 Oct 11, 2012 MedGen:C2931875,OMIM:203300 Hermansky-Pudlak syndrome 1 not provided 10 98420153 GTGATGCTTGCTGTCTTTTCCCCAGGTCTGGTCTCTGATCCAGCTGGCGCGCAGATACCTG -1 432286 NM_000092.4(COL4A4):c.594+1G>A COL4A4 Apr 20, 2017 MedGen:C1567744,OMIM:203780,Orphanet:ORPHA88919 Alport syndrome, autosomal recessive germline 2 227111677 AGAGGGGACCCAGGACTGCCTGGCTTACCAGTAAGTCTCCTGAGCAGGCTCTATGCTTCTA 104894754 25884 NM_000054.4(AVPR2):c.253G>A (p.Asp85Asn) AVPR2 Nov 01, 1997 MedGen:C1563705,OMIM:304800 Nephrogenic diabetes insipidus, X-linked germline X 153905759 CACGTCTTCATTGGCCACTTGTGCCTGGCCGACCTGGCCGTGGCTCTGTTCCAAGTGCTGC 28934605 16698 NM_000785.3(CYP27B1):c.374G>A (p.Gly125Glu) CYP27B1 Mar 05, 1998 MedGen:C0268689,OMIM:264700,Orphanet:ORPHA289157,SNOMED CT:67049004 Vitamin D-dependent rickets, type 1 germline 12 57766019 AGCACCGCCGCTGCCGCCAGCGGGCTTGCGGACTGCTCACTGCGTGAGTCTTCTCTGCCCC 587776558 18315 NM_024529.4(CDC73):c.131+1G>A CDC73 Nov 15, 2016 MedGen:C1840402,OMIM:145000;MedGen:C2675664;MedGen:CN517202 Hyperparathyroidism 1;Parathyroid adenoma, somatic;not provided germline;somatic;unknown 1 193122332 GAATGTGAAGACCAACTATGTTGTTTGGGGGTAAGTCCGGCATGGCTGTGGCCCAGGGGTG 104894016 31184 NM_000162.3(GCK):c.1132G>A (p.Ala378Thr) GCK Oct 01, 2006 MedGen:C1841962,OMIM:125851 Maturity-onset diabetes of the young, type 2 germline 7 44145618 CGCCGCGCCTGCGAGAGCGTGTCTACGCGCGCTGCGCACATGTGCTCGGCGGGGCTGGCGG 377384434 481560 NM_019032.5(ADAMTSL4):c.2375G>A (p.Trp792Ter) ADAMTSL4 Jun 29, 2017 MedGen:CN517202 not provided germline 1 150558142 TCTGTGGCCATTGGGAAGTTGGCTCTCCTTGGAGCCAGGTGAGTTTGCCCAGGCAAGGAGG 121913072 31572 NM_000129.3(F13A1):c.980G>A (p.Arg327Gln) F13A1 Feb 01, 2001 Human Phenotype Ontology:HP:0040233,MedGen:C2750514,OMIM:613225 Factor xiii, a subunit, deficiency of germline 6 6222165 GCTGTGGTCTGTCCTTTCCTGTAGTTTTACGATGCCTTGGAATACCAGCAAGAATTGTTAC 118203976 16041 NM_152778.2(MFSD8):c.1286G>A (p.Gly429Asp) MFSD8 Jul 01, 2007 MedGen:C1838571,OMIM:610951,Orphanet:ORPHA228366 Ceroid lipofuscinosis neuronal 7 germline 4 127921588 TCCTTACATCAGCTGTGCTAATAGGATTAGGCTATCCAGTCTGCAATCTTATGTCCTATAC -1 442164 NM_000435.2(NOTCH3):c.521G>A (p.Cys174Tyr) NOTCH3 Mar 24, 2015 MedGen:CN517202 not provided germline 19 15192118 TGGGTGAGCCCTGCCGCCATGGTGGCACCTGCCTCAACACACCTGGCTCCTTCCGCTGCCA 1064793668 405451 NM_001256850.1(TTN):c.73481G>A (p.Trp24494Ter) TTN Jun 18, 2015 MedGen:CN517202 not provided germline 2 178567728 TAGAGAAACGTGATTTGCCTGATGGTCGTTGGATGAAAGCTAGCTTTACAAATGTCATTGA 138326449 143193 NM_000040.2(APOC3):c.55+1G>A APOC3 Jul 03, 2014 MedGen:C0010068;MedGen:C3151467,OMIM:614028 Coronary heart disease;Hyperalphalipoproteinemia 2 germline 11 116830638 TTGCCCTCCTGGCGCTCCTGGCCTCTGCCCGTAAGCACTTGGTGGGACTGGGCTGGGGGCA 786201059 185345 NM_000546.5(TP53):c.856G>A (p.Glu286Lys) TP53 Aug 08, 2017 Human Phenotype Ontology:HP:0004808,MeSH:D015470,MedGen:C0023467,OMIM:601626,Orphanet:ORPHA519,SNOMED CT:17788007;Human Phenotype Ontology:HP:0030078,MeSH:C538231,MedGen:C0152013;MedGen:C0278701;Human Phenotype Ontology:HP:0011459,MedGen:C0152018,Orphanet:ORPHA70482;MeSH:D015179,MedGen:CN236642;MedGen:C2239176,OMIM:114550,Orphanet:ORPHA88673,SNOMED CT:187769009,SNOMED CT:25370001;MedGen:C0027672,SNOMED CT:699346009;MedGen:C0085390,Orphanet:ORPHA524,SNOMED CT:428850001;MeSH:C562393,MedGen:C0151779,SNOMED CT:93655004;Human Phenotype Ontology:HP:0030692,MeSH:D001932,MedGen:C0006118,SNOMED CT:126952004;Human Phenotype Ontology:HP:0100013,MeSH:D001943,MedGen:C1458155,Orphanet:ORPHA180250,SNOMED CT:126926005;MedGen:C0279663;Human Phenotype Ontology:HP:0006725,MedGen:C0281361;Gene:7864,Human Phenotype Ontology:HP:0030357,MeSH:D055752,MedGen:C0149925,OMIM:182280,Orphanet:ORPHA70573;MeSH:C535575,MedGen:C1168401,OMIM:275355,Orphanet:ORPHA67037;Human Phenotype Ontology:HP:0006739,MedGen:C0553723;Human Phenotype Ontology:HP:0006740,MedGen:C0279680;MedGen:C4288013;MedGen:CN517202 Acute myeloid leukemia;Adenocarcinoma of lung;Adenocarcinoma of stomach;Carcinoma of esophagus;Colorectal Neoplasms;Hepatocellular carcinoma;Hereditary cancer-predisposing syndrome;Li-Fraumeni syndrome;Malignant melanoma of skin;Neoplasm of brain;Neoplasm of the breast;Ovarian Serous Cystadenocarcinoma;Pancreatic adenocarcinoma;Small cell lung cancer;Squamous cell carcinoma of the head and neck;Squamous cell carcinoma of the skin;Transitional cell carcinoma of the bladder;Vulvar adenocarcinoma of mammary gland type;not provided germline;somatic 17 7673764 GCCTGTCCTGGGAGAGACCGGCGCACAGAGGAAGAGAATCTCCGCAAGAAAGGGGAGCCTC 28929480 32814 NM_000342.3(SLC4A1):c.268G>A (p.Glu90Lys) SLC4A1 Jun 01, 2001 MedGen:C2675212,OMIM:612653 Spherocytosis type 4 germline 17 44260716 CGCTGGGTGCAACTGGAGGAGAACCTGGGGGAGAATGGGGCCTGGGGCCGCCCGCACCTCT 372929441 130984 NM_001080442.2(SLC38A8):c.697G>A (p.Glu233Lys) SLC38A8 Dec 05, 2013 Gene:550626,MedGen:C1836603,OMIM:609218 Foveal hypoplasia 2 germline 16 84022883 GCTGAGCCGCCCTCTGTCTTACAGTGTCACGAAGCTGCCGTCTCCATCTACTGCAGCATGC 377147994 360185 NM_002225.3(IVD):c.559+1G>A IVD Nov 23, 2016 MedGen:CN517202 not provided germline 15 40411354 TCTCTATGAAGCTCAAAGCGGAAAAGAAAGGTGAGGCCACTCTCAACTTGGGAGCCAAAAT 180177152 24978 NM_002764.3(PRPS1):c.259G>A (p.Ala87Thr) PRPS1 Jan 01, 2010 MedGen:C1844677,OMIM:304500,OMIM:304590 Deafness, X-linked 1 germline X 107639431 TGCAAGATTGCTTCAGCCAGCCGGGTTACTGCAGTCATCCCATGCTTCCCTTATGCCCGGC 104894886 25989 NM_000475.4(NR0B1):c.1107G>A (p.Trp369Ter) NR0B1 Dec 15, 1994 MedGen:C0342482,OMIM:300200,SNOMED CT:237764004 Congenital adrenal hypoplasia, X-linked germline X 30308257 AGCCATCAAGTGCTTTCTTTCCAAATGCTGGAGTCTGAACATCAGTACCAAGGAGTACGCC 587777595 152772 NM_003995.3(NPR2):c.2647G>A (p.Val883Met) NPR2 Oct 01, 2013 MedGen:C4014690,OMIM:615923,Orphanet:ORPHA329191 Epiphyseal chondrodysplasia, miura type germline 9 35807333 GGGCCTCTGCTTTTCTATCCCTTTTAGGTAGTGACACTTCTTAATGACCTGTATACCTGCT 104894103 19470 NM_175073.2(APTX):c.837G>A (p.Trp279Ter) APTX Feb 06, 2017 MedGen:C1859598,OMIM:208920,Orphanet:ORPHA1168;MedGen:CN517202 Adult onset ataxia with oculomotor apraxia;not provided germline 9 32974495 TTCTCCTTGCCTTAAAAACAAAAAACATTGGAATTCTTTCAATACAGAATACTTCCTAGAA 769975073 209388 NM_016008.3(DYNC2LI1):c.372G>A (p.Trp124Ter) DYNC2LI1 Jun 16, 2015 MedGen:C4310724,OMIM:617088 Short-rib thoracic dysplasia 15 with polydactyly germline;maternal 2 43794508 TCTGGATCTTTCAAAACCTAATGATCTCTGGCCCACCATGGAAAATCTCTTGCAAGCCACA 61750138 237670 NM_000350.2(ABCA4):c.4253+5G>A ABCA4 May 09, 2017 Human Phenotype Ontology:HP:0000556,MedGen:C0854723,Orphanet:ORPHA71862,SNOMED CT:314407005;MedGen:C0271093,Orphanet:ORPHA827,SNOMED CT:70099003;MeSH:C535804,MedGen:C1855465,OMIM:248200 Retinal dystrophy;Stargardt disease;Stargardt disease 1 germline;unknown 1 94030991 TATGGGCAGCAGTACACCTTCTTCAGGTGCGCGGACTCGGGGTCACCATTCTCCTCTGTGG 74315351 22104 NM_007262.4(PARK7):c.78G>A (p.Met26Ile) PARK7 Jul 01, 2012 MedGen:C1853445,OMIM:606324 Parkinson disease 7 germline 1 7962863 AATGGAGACGGTCATCCCTGTAGATGTCATGAGGCGAGCTGGGGTAAGTCCCACATCGATT 28931568 33005 NM_001127701.1(SERPINA1):c.272G>A (p.Gly91Glu) SERPINA1 Jul 15, 2016 MedGen:C0221757,OMIM:613490,Orphanet:ORPHA60,SNOMED CT:30188007;na Alpha-1-antitrypsin deficiency;PI M(MINERAL SPRINGS) germline 14 94382966 TCGCTACAGCCTTTGCAATGCTCTCCCTGGGGACCAAGGCTGACACTCACGATGAAATCCT -1 29309 NM_000248.3(MITF):c.33+1G>A MITF Nov 01, 1994 MedGen:C1860339,OMIM:193510 Waardenburg syndrome type 2A germline 3 69936756 CTGGAAATGCTAGAATATAATCACTATCAGGTGAGATTTATTCTGACTCATATTCAGTCTT 886041355 264290 NM_001453.2(FOXC1):c.456G>A (p.Trp152Ter) FOXC1 Sep 16, 2016 MedGen:CN517202 not provided germline 6 1610901 CGACAAGAAGCCGGGCAAGGGCAGCTACTGGACGCTGGACCCGGACTCCTACAACATGTTC 281865550 49675 NM_018081.2(WRAP53):c.1303G>A (p.Gly435Arg) WRAP53 May 10, 2012 MedGen:C3151442,OMIM:613988 Dyskeratosis congenita, autosomal recessive, 3 germline 17 7703027 GGGCAGTTCCTAGTGAGTGGCAGCACGAGCGGGGCTGTCTCTGTGTGGGACACGGACGGGC -1 442594 NM_000302.3(PLOD1):c.1097+1G>A PLOD1 Jul 06, 2017 MedGen:CN517202 not provided germline 1 11960768 GGCGAATGCAGATGCCAGGAACATGGGCGCGTGAGTTGTGGGCCACAGTACTCTCCACTGA 886043990 272967 NM_000642.2(AGL):c.2158-1G>A AGL Jun 10, 2016 MedGen:C0017922,OMIM:232400,Orphanet:ORPHA308684,SNOMED CT:66937008 Glycogen storage disease type III germline 1 99881540 AGCTAATCTAGTTGTTCTTTCTGCTTCTCAGGTGTATGTGGATCAAGTTGATGAAGACATA 1057516115 353987 NM_172107.3(KCNQ2):c.1247+1G>A KCNQ2 Mar 31, 2016 MedGen:C1852587,OMIM:121200 Benign familial neonatal seizures 1 germline 20 63424176 GAAGGACCCCCCGCCGGAGCCGTCTCCAAGGTCAGTGCCCCCTGCTGCTACCCTGGTGTCT 121908020 18805 NM_000375.2(UROS):c.673G>A (p.Gly225Ser) UROS Sep 12, 2013 MedGen:C0162530,OMIM:263700,Orphanet:ORPHA79277 Congenital erythropoietic porphyria germline 10 125788993 TCTCTTCTGTCTTTATAGTTTGCAGCCATCGGCCCCACTACGGCTCGCGCGCTGGCCGCCC 387906605 38589 NM_000094.3(COL7A1):c.4565G>A (p.Gly1522Glu) COL7A1 Nov 01, 2005 MedGen:C1851573,OMIM:131705,Orphanet:ORPHA79411 Transient bullous dermolysis of the newborn germline 3 48582512 TCCTGGGCTCACACTTTCTCTACATTCAGGGGCCACCAGGACCCACTGGCCGCCAAGGAGA 387907066 39905 NM_018344.5(SLC29A3):c.1088G>A (p.Arg363Gln) SLC29A3 Apr 01, 2013 MedGen:C1864445,OMIM:602782,Orphanet:ORPHA168569 Histiocytosis-lymphadenopathy plus syndrome germline 10 71362268 TCCTGTACAACTTTGCTGACCTATGTGGCCGGCAGCTCACCGCCTGGATCCAGGTGCCAGG 188286943 39152 NM_018206.5(VPS35):c.1858G>A (p.Asp620Asn) VPS35 Apr 19, 2017 MedGen:C3280133,OMIM:614203 Parkinson disease 17 germline 16 46662452 GCATTTTCTCTGTATGAAGATGAAATCAGCGATTCCAAAGCACAGCTAGCTGCCATCACCT 137852360 25165 NM_000132.3(F8):c.6977G>A (p.Arg2326Gln) F8 Jun 13, 1986 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154837676 TAGACCCACCGTTACTGACTCGCTACCTTCGAATTCACCCCCAGAGTTGGGTGCACCAGAT 121913563 29369 NM_005912.2(MC4R):c.523G>A (p.Ala175Thr) MC4R Mar 16, 2011 MedGen:C0028754,OMIM:601665,Orphanet:ORPHA71529,SNOMED CT:414916001 Obesity germline 18 60371827 CGGGTTGGGATCATCATAAGTTGTATCTGGGCAGCTTGCACGGTTTCAGGCATTTTGTTCA 866061439 264153 NM_000094.3(COL7A1):c.6190G>A (p.Gly2064Arg) COL7A1 Jun 16, 2016 MedGen:CN517202 not provided germline 3 48575233 CACCCGCTATTTGCATTTCAGGGAGAACGGGGAGAGAAAGGAGAACGTGGAGAACAGGTGG 121908123 19504 NM_025216.2(WNT10A):c.27G>A (p.Trp9Ter) WNT10A Jul 01, 2009 MedGen:C0796093,OMIM:257980,Orphanet:ORPHA2721 Odontoonychodermal dysplasia germline 2 218881022 CGCCATGGGCAGCGCCCACCCTCGCCCCTGGCTGCGGCTCCGACCCCAGCCCCAGCCGCGG 1131690787 420429 NM_017780.3(CHD7):c.5405-13G>A CHD7 May 11, 2017 MedGen:C0265354,OMIM:214800,Orphanet:ORPHA138,SNOMED CT:47535005 CHARGE association not applicable 8 60850480 TTTGTTTCTGTGTGTTTTCTGTGCACGGATGGGCACGGCACAGGCTATGAGAAGTACAACT 587779255 419530 NM_000179.2(MSH6):c.3172+1G>A MSH6 Sep 25, 2017 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 2 47801156 AGTCTGCTGTAGAGTGTATCGCAGTGTTGGGTAAGACTTTGAACAAGCTTGTTCTCAGGCT 587784169 168242 NM_022455.4(NSD1):c.5951G>A (p.Arg1984Gln) NSD1 Feb 27, 2017 MedGen:C0004903,OMIM:130650,Orphanet:ORPHA116,SNOMED CT:81780002;MedGen:CN035106,OMIM:117550;MedGen:CN517202 Beckwith-Wiedemann syndrome;Sotos syndrome 1;not provided germline 5 177282523 AGCTTATAGATGAAGAAGAATGCAGAGCTCGAATTCGCTATGCTCAAGAACATGATATCAC 398123295 98665 NM_000280.4(PAX6):c.357+1G>A PAX6 Apr 19, 2016 MedGen:C0344542,OMIM:106210;MedGen:CN517202 Aniridia 1;not provided germline 11 31801560 GGGGTCTGTACCAACGATAACATACCAAGCGTAAGTTCATTGAGAACATCTGCCCTCCCTG 267607142 18809 NM_017636.3(TRPM4):c.19G>A (p.Glu7Lys) TRPM4 Sep 01, 2009 Gene:8184,MedGen:C1970298,OMIM:604559 Progressive familial heart block type 1B germline 19 49157885 GGCCGCGGCAGCATGGTGGTGCCGGAGAAGGAGCAGGTGAGCGCCGGACCAGGGTCTGCGG 72554349 103055 NM_000531.5(OTC):c.299G>A (p.Gly100Asp) OTC - MedGen:CN517202 not provided unknown X 38381342 AATGATTTTTTTCTTTTTTTTTTATTGTAGGCTTTGCACTTCTGGGAGGACATCCTTGTTT -1 437718 NM_000475.4(NR0B1):c.1169-1G>A NR0B1 Sep 20, 2017 MedGen:C0342482,OMIM:300200,SNOMED CT:237764004 Congenital adrenal hypoplasia, X-linked germline X 30304824 TTTTATAACAAAGAGATTTTTCTCCCTCCAGACGTGCCGGGCCTGCAGTGCGTGAAGTACA 80359841 201176 NM_006516.2(SLC2A1):c.18+1G>A SLC2A1 Sep 18, 2014 MedGen:CN517202 not provided germline 1 42958633 CGCAGCGCTGCCATGGAGCCCAGCAGCAAGGTGAGTCGCGCGCCCGCGGGCCCTCCCGCCA 199473153 78618 NM_198056.2(SCN5A):c.2254G>A (p.Gly752Arg) SCN5A Sep 25, 2017 MedGen:C1142166,Orphanet:ORPHA130,SNOMED CT:418818005;MedGen:CN230736;MedGen:CN517202 Brugada syndrome;Cardiovascular phenotype;not provided germline 3 38597737 ACAAGTGAATTCGAGGAGATGCTGCAGGTCGGAAACCTGGTAAGGGCTGCCTGCAGCTGGC 796065346 200767 NM_019074.3(DLL4):c.1169G>A (p.Cys390Tyr) DLL4 Aug 19, 2015 MedGen:C0265268,Orphanet:ORPHA974,SNOMED CT:34748004;MedGen:C4225271,OMIM:616589 Adams-Oliver syndrome;Adams-Oliver syndrome 6 germline;unknown 15 40935046 GCAACCAGGGGGCCAACTATGCTTGTGAATGTCCCCCCAACTTCACCGGCTCCAACTGCGA 80338801 33888 NM_000070.2(CAPN3):c.946-1G>A CAPN3 Jul 05, 2012 MedGen:C1869123,OMIM:253600,Orphanet:ORPHA267 Limb-girdle muscular dystrophy, type 2A not provided 15 42392638 CCTAATGGGTTCTCTGGTTACTGCTCTACAGACAATCATTCCGGTTCAGTATGAGACAAGA 606231221 31051 NM_002087.3(GRN):c.835+1G>A GRN Aug 24, 2006 MedGen:C1843792,OMIM:607485 Frontotemporal dementia, ubiquitin-positive germline 17 44351164 ACCTCCTCACTAAGCTGCCTGCGCACACAGGTACCAGAGGCAGGGTGCAGATACAGGGGTG 104886136 35776 NM_000495.4(COL4A5):c.1681G>A (p.Gly561Arg) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108597470 CTCACTTTTCCAGGAATGAAGGGTGACAAAGGAGAGTTGGGTTCCCCTGGAGCTCCAGGGC 397514658 48718 NM_024531.4(SLC52A2):c.1255G>A (p.Gly419Ser) SLC52A2 Mar 17, 2015 MedGen:C3553538,OMIM:614707 Brown-Vialetto-Van Laere syndrome 2 germline 8 144360932 GGCGTGGCCATCCAGGTGGGCTCTCTGCTCGGCGCTGTTGCTATGTTCCCCCCGACCAGCA 137852702 23947 NM_000310.3(PPT1):c.134G>A (p.Cys45Tyr) PPT1 Jan 30, 2007 MedGen:C1850451,OMIM:256730,Orphanet:ORPHA228329 Ceroid lipofuscinosis neuronal 1 germline 1 40092498 TCATTGTGTTTTGTTGGCTAGGAGACAGCTGTTGCAATCCCTTAAGCATGGGTGCTATTAA 113994064 20989 NM_003907.2(EIF2B5):c.944G>A (p.Arg315His) EIF2B5 Jul 24, 2007 MedGen:C1858991,OMIM:603896,Orphanet:ORPHA99854 Leukoencephalopathy with vanishing white matter germline 3 184140518 TGTACTCAGCTGTCTGTGCTGACGTCATCCGCCGATGGGTCTACCCTCTCACCCCAGAGGC 863223567 209768 NM_001999.3(FBN2):c.3593G>A (p.Cys1198Tyr) FBN2 May 24, 2014 MedGen:CN517202 not provided germline 5 128338002 GACACGAGCTGTCACCATCCCGTGAGGACTGTGTGGGTGAGTTTATCTCCTCAGCACATAA 794727715 194893 NM_001849.3(COL6A2):c.801+1G>A COL6A2 Jan 13, 2015 MedGen:CN029274,OMIM:158810;MedGen:CN033863,OMIM:254090 Bethlem myopathy 1;Ullrich congenital muscular dystrophy 1 germline 21 46114074 TCTGGCCCCAAGGGCTACCGTGGACAGAAGGTAAGATGCCCAGATTACCTGCAGGGTCTGC 281860281 46939 NM_005211.3(CSF1R):c.2345G>A (p.Arg782His) CSF1R Mar 12, 2013 Gene:8156,MedGen:C1857300,OMIM:221820 Hereditary diffuse leukoencephalopathy with spheroids germline 5 150056316 CTCAGTGCATCCACCGGGACGTGGCAGCGCGTAACGTGCTGTTGACCAATGGTCATGTGGC 886041259 264041 NM_021007.2(SCN2A):c.4777G>A (p.Gly1593Arg) SCN2A Aug 29, 2016 MedGen:CN517202 not provided germline 2 165386971 ATCTCTCTTCGTTACTACTATTTCACTATTGGATGGAATATTTTTGATTTTGTGGTGGTCA 587779197 96726 NM_000251.2(MSH2):c.942G>A (p.Gln314=) MSH2 Sep 05, 2013 MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Lynch syndrome germline 2 47414418 TGCAGCAGTCAGAGCCCTTAACCTTTTTCAGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAG 878855078 242970 NM_023036.4(DNAI2):c.1420G>A (p.Gly474Arg) DNAI2 Nov 11, 2016 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244 Ciliary dyskinesia germline 17 74310089 GGGTGTCTCATCGCCTGCGGCTCCCAGCTGGGGACAACCACCCTGCTGGAGGTCTCGCCTG 587784115 168180 NM_022455.4(NSD1):c.4378+1G>A NSD1 Feb 08, 2013 MedGen:CN035106,OMIM:117550 Sotos syndrome 1 germline 5 177244271 CCACATCTTATTCAAAAGATTTTGGTGGAGGTGAGTATTTTTGAGATTTAAAAAACGTAAT 104893715 23333 NM_033337.2(CAV3):c.253G>A (p.Ala85Thr) CAV3 Apr 15, 2012 MedGen:C2678485,OMIM:611818;MedGen:CN517202 Long QT syndrome 9;not provided de novo;germline 3 8745664 CTGTTGTCCACGCTGCTGGGCGTCCCACTGGCCCTGCTCTGGGGCTTCCTGTTCGCCTGCA 199476088 23274 NM_004329.2(BMPR1A):c.1127G>A (p.Cys376Tyr) BMPR1A Oct 01, 2001 MedGen:C0345893,OMIM:174900,Orphanet:ORPHA329971,SNOMED CT:9273005 Juvenile polyposis syndrome germline 10 86919430 AAAACATCCTCATCAAGAAAAATGGGAGTTGCTGCATTGCTGACCTGGGCCTTGCTGTTAA 121908722 17023 NM_000022.3(ADA):c.467G>A (p.Arg156His) ADA Jul 01, 1996 MedGen:C1863237;MedGen:C1863236,OMIM:102700,Orphanet:ORPHA277 SCID due to ADA deficiency, delayed onset;Severe combined immunodeficiency due to ADA deficiency unknown 20 44625580 TCAAGGCCCGGTCCATCCTGTGCTGCATGCGCCACCAGCCCAGTGAGTAGGATCACCGCCC 879253882 245163 NM_001972.3(ELANE):c.597+5G>A ELANE Mar 24, 2017 MedGen:C0221023,OMIM:162800,Orphanet:ORPHA2686,SNOMED CT:191347008;MedGen:C1859966,OMIM:202700;MedGen:CN517202 Cyclical neutropenia;Severe congenital neutropenia autosomal dominant;not provided germline 19 855799 GGGGCCGGCAGGCCGGCGTCTGTTTCGTACGTGCCCTGGGTGTCCCTCTGCTCCCCACCCG 267606785 27812 NM_002354.2(EPCAM):c.197G>A (p.Cys66Tyr) EPCAM Jul 01, 2013 MedGen:C2750737,OMIM:613217,Orphanet:ORPHA92050 Diarrhea 5, with tufting enteropathy, congenital germline 2 47373820 TTAAGGTTTCTTTTTCAGTGGCTGCCAAATGTTTGGTGATGAAGGCAGAAATGAATGGCTC 11558261 33025 NM_001127701.1(SERPINA1):c.415G>A (p.Gly139Ser) SERPINA1 Jul 15, 2016 MedGen:C0221757,OMIM:613490,Orphanet:ORPHA60,SNOMED CT:30188007;na;na;na;na Alpha-1-antitrypsin deficiency;PI NULL(DEVON);PI NULL(NEWPORT);PI Q0(DEVON);PI Q0(NEWPORT) germline 14 94382823 CAGCCAGACAGCCAGCTCCAGCTGACCACCGGCAATGGCCTGTTCCTCAGCGAGGGCCTGA -1 443215 NM_004321.7(KIF1A):c.595G>A (p.Gly199Arg) KIF1A Oct 04, 2017 MedGen:CN517202 not provided germline 2 240786348 TACAATGACATCCAGGACCTCATGGACTCAGGGAACAAGGCCAGGTGGGTGGAGGGACTCA 128620185 26387 NM_000061.2(BTK):c.83G>A (p.Arg28His) BTK Jan 25, 2017 MedGen:C1832241,OMIM:601495,Orphanet:ORPHA33110;MedGen:C0221026,OMIM:300755,Orphanet:ORPHA47,SNOMED CT:65880007;MedGen:CN517202 Agammaglobulinemia, non-Bruton type;X-linked agammaglobulinemia;not provided germline X 101375202 AGAAAACATCACCTCTAAACTTCAAGAAGCGCCTGTTTCTCTTGACCGTGCACAAACTCTC 755348996 397086 NM_000118.3(ENG):c.219G>A (p.Thr73=) ENG May 05, 2017 MedGen:C0039445,OMIM:187300,Orphanet:ORPHA774,SNOMED CT:21877004;MedGen:CN169374 Osler hemorrhagic telangiectasia syndrome;not specified germline 9 127843094 AGTCCATGTCCTCTTCCTGGAGTTCCCAACGGTGAGTGTCCCATGGCAGGGTCGGGTGGGG 121918280 17513 NM_000401.3(EXT2):c.778G>A (p.Asp260Asn) EXT2 May 01, 2009 MedGen:C1851413,OMIM:133701 Multiple exostoses type 2 germline 11 44114237 TTTTCTACGTGGACTTACCGGCAAGGCTACGATGTCAGCATTCCTGTCTATAGTCCACTGT 112240298 198767 NM_001256850.1(TTN):c.94066+1G>A TTN Jan 26, 2015 EFO:EFO_0000407,Human Phenotype Ontology:HP:0001644,MedGen:C0007193,Orphanet:ORPHA217604,SNOMED CT:195021004;MedGen:CN517202 Primary dilated cardiomyopathy;not provided germline 2 178538945 CTGAACCAGTTGTTTGCAAAGATCCATTTGGTAAGGAATTCAGAAGAAGGGGTTAAATTAA 1131690992 420471 NM_000264.4(PTCH1):c.2190G>A (p.Trp730Ter) PTCH1 Apr 18, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 9 95468811 CCACTGCCTCGAGCCCCCCTGTACGAAGTGGACACTCTCATCTTTTGCTGAGAAGCACTAT 397515548 76583 NM_004456.4(EZH2):c.2233G>A (p.Glu745Lys) EZH2 Jul 18, 2013 MedGen:C0265210,OMIM:277590,SNOMED CT:63119004 Weaver syndrome not provided 7 148807669 CAGGCTGATGCCCTGAAGTATGTCGGCATCGAAAGAGAAATGGAAATCCCTTGACATCTGC 199474703 40437 NM_000258.2(MYL3):c.281G>A (p.Arg94His) MYL3 Aug 01, 2015 MedGen:C1837471,OMIM:608751;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Familial hypertrophic cardiomyopathy 8;Primary familial hypertrophic cardiomyopathy;not provided germline 3 46860702 GCCAGAACCCCACACAGGCAGAAGTGCTCCGTGTCCTGGGGAAGCCAAGACAGGAAGGTAG 886037716 248830 NM_177438.2(DICER1):c.4517G>A (p.W1506*) DICER1 Nov 10, 2014 MedGen:CN072455,OMIM:601200;MedGen:C0027672,SNOMED CT:699346009 DICER1-related pleuropulmonary blastoma cancer predisposition syndrome;Hereditary cancer-predisposing syndrome germline 14 95096403 CAGATTTTGAGGATTTTGACTACAGCTCTTGGGATGCAATGTGCTATCTGGATCCTAGCAA 377294947 186794 NM_000136.2(FANCC):c.65G>A (p.Trp22Ter) FANCC Aug 14, 2017 MedGen:C3468041,OMIM:227645 Fanconi anemia, complementation group C germline;unknown 9 95249227 ATCAGTTTTGGATGCAGAAGCTTTCTGTATGGGATCAGGCTTCCACTTTGGAAACCCAGCA 786205909 190115 NM_017649.4(CNNM2):c.364G>A (p.Glu122Lys) CNNM2 Oct 12, 2017 MedGen:C4225333,OMIM:616418 Hypomagnesemia, seizures, and mental retardation germline;inherited 10 102918844 AACGAGACGTGGTCCCGCATCGCCTTCACCGAGCACGAGCGGCGGCGCCACAGCCCGGGGG 121917786 27077 NM_001018115.2(FANCD2):c.3707G>A (p.Arg1236His) FANCD2 Feb 01, 2001 MedGen:C3160738,OMIM:227646 Fanconi anemia, complementation group D2 germline 3 10090315 CTTCTAGGCATACTTTTGTTGTTTTCTTCCGTGTGATGATGGCTGAACTAGAGAAGACGGT 1060501102 392453 NM_014585.5(SLC40A1):c.1469G>A (p.Gly490Asp) SLC40A1 Mar 04, 2017 MedGen:C1853733,OMIM:606069,Orphanet:ORPHA139491 Hemochromatosis type 4 germline 2 189562125 TGCAAGAAAATGTAATTGAATCTGAAAGAGGCATTATAAATGGTGTACAGAACTCCATGAA 128624213 26331 NM_000033.3(ABCD1):c.871G>A (p.Glu291Lys) ABCD1 Nov 01, 1993 MedGen:C0162309,OMIM:300100,Orphanet:ORPHA43,SNOMED CT:65389002 Adrenoleukodystrophy germline X 153726137 TACATGCACTCGCGTGTGGTGGCCAACTCGGAGGAGATCGCCTTCTATGGGGGCCATGAGG 121908230 23552 NM_001127221.1(CACNA1A):c.4037G>A (p.Arg1346Gln) CACNA1A Dec 30, 2016 MedGen:C1832894,OMIM:141500;MedGen:CN517202 Familial hemiplegic migraine type 1;not provided germline 19 13262789 GAAAAGACATCAACACGATTAAATCCCTCCGAGTCCTCCGGGTGCTACGACCTCTTAAAAC 199474717 51282 NM_152263.3(TPM3):c.721G>A (p.Glu241Lys) TPM3 Apr 11, 2013 MedGen:C0546264,OMIM:255310,Orphanet:ORPHA2020,SNOMED CT:240084007;MedGen:CN517202 Congenital myopathy with fiber type disproportion;not provided not provided 1 154170454 TCATATTTCCCCCAGGCAGAGACCCGTGCTGAGTTTGCTGAGAGATCGGTAGCCAAGCTGG 752298579 205385 NM_152906.6(TANGO2):c.460G>A (p.Gly154Arg) TANGO2 Apr 13, 2017 MedGen:CN232560;MedGen:C0003811,OMIM:115000;MedGen:CN232559;MedGen:C0025362,SNOMED CT:228156007,SNOMED CT:91138005;MedGen:CN232558;MedGen:C4225171,OMIM:616878 Acute rhabdomyolysis;Cardiac arrhythmia;Episodic flaccid weakness;Intellectual functioning disability;Seizures;TANGO2-Related Metabolic Encephalopathy and Arrhythmias germline;maternal;paternal 22 20061538 GCCCGCTGATTGCTCCTCACAGGCACCTACGGGCTGAGCAACGCGCTGCTGGAGACTCCCT 863225012 213849 NM_004006.2(DMD):c.8357G>A (p.Trp2786Ter) DMD Apr 29, 2013 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Duchenne muscular dystrophy germline X 31507314 AAAGACGTTTGGATAACATGAACTTCAAGTGGAGTGAACTTCGGAAAAAGTCTCTCAACAT 587779555 107005 NM_000090.3(COL3A1):c.683G>A (p.Gly228Glu) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188989442 CTGGTGCTATAGGTCCATCTGGTCCTGCTGGAAAAGATGTAAGTTTTTAAAACTTAAATAA 104886110 35733 NM_000495.4(COL4A5):c.1268G>A (p.Gly423Glu) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108591160 CACCTGGAATTTCCATTCCTGGACCTCCTGGACTTGACGGACAGCCTGGGGCTCCTGGGCT 147656110 260409 NM_021815.4(SLC5A7):c.1082G>A (p.Arg361Gln) SLC5A7 Oct 07, 2016 MedGen:C4310694,OMIM:617143 Myasthenic syndrome, congenital, 20, presynaptic germline 2 108008651 CCATCTTGTCAGCAAGTTCCATGTTTGCACGGAACATCTACCAGCTTTCCTTCAGACAAAA 137853890 16298 NM_022356.3(P3H1):c.2055+18G>A P3H1 Aug 07, 2017 MedGen:C1970458,OMIM:610915 Osteogenesis imperfecta type 8 germline 1 42747254 ACACAGCGAGCGGGTGAGAGCAGCTCGAGCGGGTGAGAGCAGCTGGTGCTGTGGTGACCCG -1 482162 NM_022068.3(PIEZO2):c.5083-1G>A PIEZO2 Dec 07, 2017 MedGen:CN517202 not provided germline 18 10714931 AAGAACTGTGGCAATGTCTCATTCTCCTCAGGGCAATGTTCCAACTCGGGAGAGCATCCAC 786200914 26599 NM_001449.4(FHL1):c.688+1G>A FHL1 Aug 18, 2009 MedGen:C2678055,OMIM:300696,Orphanet:ORPHA178461 Myopathy with postural muscle atrophy, X-linked germline X 136208642 AGTGTGCTGGATGCAAGAACCCCATCACTGGTAGGCTAAAGAGTCCTTGCTAAGTCTGCCA 143353451 179937 NM_001128425.1(MUTYH):c.545G>A (p.Arg182His) MUTYH Jan 12, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C3272841;MedGen:C1837991,OMIM:608456,Orphanet:ORPHA247798;MedGen:CN517202;MedGen:CN169374 Hereditary cancer-predisposing syndrome;MUTYH-associated polyposis;MYH-associated polyposis;not provided;not specified germline 1 45332794 AACTCTGGGCTGGCCTGGGCTACTATTCTCGTGGCCGGCGGCTGCAGGAGGGAGCTCGGAA 104893930 24214 NM_000344.3(SMN1):c.88G>A (p.Asp30Asn) SMN1 Jan 01, 2005 MedGen:C0393538,OMIM:253550,Orphanet:ORPHA83418,SNOMED CT:128212001 Spinal muscular atrophy, type II germline 5 70938845 GTTTTTATTTCTTACCCTTTCCAGAGCGATGATTCTGACATTTGGGATGATACAGCACTGA 730880296 178842 NM_000732.4(CD3D):c.274+5G>A CD3D Nov 27, 2014 MedGen:C3810147,OMIM:615617 Immunodeficiency 19 germline;inherited 11 118340370 ATCTACCGTGCAAGTTCATTATCGAAGTACGTGCTTCCTGAACCCTTTGGGTTGGAATGGA 119475041 19408 NM_014762.3(DHCR24):c.571G>A (p.Glu191Lys) DHCR24 Mar 04, 2016 MedGen:C1865596,OMIM:602398,Orphanet:ORPHA35107 Desmosterolosis germline 1 54875134 GGCCTGTTCCAACACATCTGCACTGCTTACGAGCTGGTCCTGGCTGATGGCAGCTTTGTGC 28940308 17192 NM_017929.5(PEX26):c.265G>A (p.Gly89Arg) PEX26 Aug 01, 2003 MedGen:C3539168,OMIM:614872 Peroxisome biogenesis disorder 7A germline 22 18079908 TTGGAGGTGAAGTGCTCCCTGTGTGTTGTGGGGATCCAGGCCCTGGCAGAAATGGATCGGT -1 442408 NM_000444.5(PHEX):c.1899+1G>A PHEX Jan 17, 2017 MedGen:CN517202 not provided germline X 22221744 AACTATTATTGGAAGAAAGCTGGCTTAAATGTGAGTACAACTGTGGCTAAGGGGGGCACCT 121964846 27508 NM_001159287.1(TPI1):c.478G>A (p.Gly160Arg) TPI1 Mar 01, 1992 MedGen:C4016412 Triosephosphate isomerase manchester germline 12 6869300 AAAGTGGCCCATGCTCTGGCAGAGGGACTCGGAGTAATCGCCTGCATTGGGGAGAAGCTAG 121918526 25716 NM_031407.6(HUWE1):c.8942G>A (p.Arg2981His) HUWE1 Jan 30, 2017 MedGen:C2678046,OMIM:300706,Orphanet:ORPHA85328;MedGen:CN517202 Mental retardation, X-linked, syndromic, turner type;not provided germline X 53551420 CTTTTCTGGCTGCCCTGCCTGATGACATCCGTCGGGAAGTTCTACAGAACCAGCTAGGCAT 863225143 214253 NM_001134831.1(AHI1):c.1260G>A (p.Trp420Ter) AHI1 Feb 23, 2015 MedGen:C1837713,OMIM:608629 Joubert syndrome 3 unknown 6 135455818 TAAACAGTTAAAATCAAGACTTCCAGAGTGGGAAGAACAAATTGTATTTAATGAAAATTTT -1 425430 NM_001165963.2(SCN1A):c.1151G>A (p.Trp384Ter) SCN1A May 23, 2017 MedGen:CN517202 not provided germline 2 166047646 CCTTGTTTCGACTAATGACTCAGGACTTCTGGGAAAATCTTTATCAACTGGTGAGAACTAA 72653131 32370 NM_000088.3(COL1A1):c.2515G>A (p.Gly839Ser) COL1A1 Mar 01, 1996 MedGen:C0268362,OMIM:259420,Orphanet:ORPHA216812,SNOMED CT:385483009;MedGen:C0268363,OMIM:166220,Orphanet:ORPHA216820,SNOMED CT:205497004 Osteogenesis imperfecta type III;Osteogenesis imperfecta with normal sclerae, dominant form germline;unknown 17 50190045 CCTGGTGATGCTGGTGCTAAAGGCGATGCTGGTCCCCCTGGCCCTGCCGGACCCGCTGGAC 137852564 24845 NM_000044.4(AR):c.2599G>A (p.Val867Met) AR Feb 27, 2017 MedGen:C0039585,OMIM:300068,SNOMED CT:12313004 Androgen resistance syndrome germline X 67722976 TTCTACCAGCTCACCAAGCTCCTGGACTCCGTGCAGCCTGTAAGCAAACGATGGAGGGTGC 267606772 22326 NM_001190716.1(DNM2):c.1072G>A (p.Gly358Arg) DNM2 Apr 12, 2017 MedGen:C2751364;MedGen:C1847902,OMIM:606482;MedGen:CN517202 Charcot-Marie-Tooth disease, type 2M;DNM2-related intermediate Charcot-Marie-Tooth neuropathy;not provided germline;paternal 19 10793799 GGAGATCAGGTGGACACTCTGGAGCTCTCCGGGGGCGCCCGAATCAATCGCATCTTCCACG 121917827 32020 NM_021954.3(GJA3):c.227G>A (p.Arg76His) GJA3 Aug 01, 2004 MedGen:C1866078,OMIM:601885 Zonular pulverulent cataract 3 germline 13 20143062 ACGACAGGGCCTTCCCCATCTCCCACATCCGCTTCTGGGCGCTGCAGATCATCTTCGTGTC 587779596 107056 NM_000090.3(COL3A1):c.647G>A (p.Gly216Glu) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188989406 TTTTATTTCCTTATTTTCAGGGCCCTCCAGGACCTCCTGGTGCTATAGGTCCATCTGGTCC 140402727 236885 NM_018946.3(NANS):c.452G>A (p.Arg151His) NANS Jun 20, 2017 MedGen:C1864872,OMIM:610442,Orphanet:ORPHA168454 Spondyloepimetaphyseal dysplasia Genevieve type germline 9 98078196 TGATGGTGTTGGTGCTGGATTACTCAGGTCGCCCAATGGTGATCTCCAGTGGGATGCAGTC 121434308 16867 NM_005767.5(LPAR6):c.436G>A (p.Gly146Arg) LPAR6 Jun 02, 2015 MedGen:C1848435,OMIM:278150 Hypotrichosis 8 germline 13 48411988 GTTTGCACTGGCGTGTGGTTAACTGTGATCGGAGGAAGTGCACCCGCCGTTTTTGTTCAGT 61751263 104995 NM_000350.2(ABCA4):c.1938-1G>A ABCA4 Jan 01, 2015 Human Phenotype Ontology:HP:0007754,MedGen:C0730292;MedGen:C1866422,OMIM:601718;MeSH:C535804,MedGen:C1855465,OMIM:248200;MedGen:CN517202 Macular dystrophy;Retinitis pigmentosa 19;Stargardt disease 1;not provided germline;unknown 1 94060760 CTACTATTCTGCTTCTCTCCTTTTGCTTTAGTTTCATGATCATCCTGAACCGCTGTTTCCC 751454741 424254 NM_000243.2(MEFV):c.332G>A (p.Gly111Glu) MEFV Jun 25, 2017 MedGen:C0004943,OMIM:109650,Orphanet:ORPHA117,SNOMED CT:310701003 Behcet's syndrome germline 16 3254736 CAGATGATTCCGCAGCGTCCAGCTCCCTGGGGGAGAACAAGCCCAGGAGCCTGAAGACTCC 755799430 223645 NM_182894.2(VSX2):c.667G>A (p.Gly223Arg) VSX2 Jan 01, 2013 MedGen:CN235161 Anophthalmia - microphthalmia inherited 14 74259689 AGCAGTGTCATGGCGGAGTATGGGCTCTACGGGGCCATGGTGCGGCACTCCATCCCCCTGC 104894076 19231 NM_018972.2(GDAP1):c.482G>A (p.Arg161His) GDAP1 Jan 01, 2002 MedGen:C1859198,OMIM:214400,Orphanet:ORPHA99948 Charcot-Marie-Tooth disease, type 4A germline 8 74360308 TGATCCCGGCTTATGCAACTACAAGGATTCGTAGTATGTAAACATTTTAAAGACCTGGAAT 606231465 171277 NM_001845.5(COL4A1):c.2194-1G>A COL4A1 Jan 15, 2013 MedGen:C1843512,OMIM:607595 Brain small vessel disease with hemorrhage germline 13 110179422 ATTTGCTTCTCTGTGCTTTGGGGATTTTCAGGGAGAGCCTGGAGTTGGTCTACCGGGACTC 1057518972 360897 NM_014112.4(TRPS1):c.2794G>A (p.Ala932Thr) TRPS1 Jan 24, 2017 Human Phenotype Ontology:HP:0002229,MedGen:C0002171;Human Phenotype Ontology:HP:0001156,MedGen:CN001088;Human Phenotype Ontology:HP:0000447,MedGen:C1853482;Human Phenotype Ontology:HP:0003508,MedGen:C0878660;MedGen:C0432233,OMIM:190350,SNOMED CT:254091006 Alopecia areata;Brachydactyly syndrome;Pear-shaped nose;Proportionate short stature;Trichorhinophalangeal dysplasia type I germline;unknown 8 115418359 AAGAATGCAAATGGCGGATATGTATGCAACGCGTGTGGCCTCTACCAGAAGCTTCACTCGG 398123577 99527 NM_001143979.1(NDE1):c.704-1G>A NDE1 Aug 13, 2013 MedGen:CN517202 not provided germline 16 15694164 GAGTTACATGCTCTTCCCTTTGCACACCCAGGCCTGGACGACTCCACCGGGGGGACCCCCC 121964981 27013 NM_000481.3(AMT):c.806G>A (p.Gly269Asp) AMT Jun 01, 1994 Human Phenotype Ontology:HP:0008288,MedGen:C0751748,OMIM:605899,Orphanet:ORPHA407,SNOMED CT:237939006 Non-ketotic hyperglycinemia germline 3 49419042 CAGCCAGGGACAGCCTGCGCCTGGAGGCAGGCCTCTGCCTGTATGGGAATGACATTGATGA 121912926 32267 NM_000090.3(COL3A1):c.547G>A (p.Gly183Ser) COL3A1 May 26, 2017 MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000;MedGen:CN517202 Ehlers-Danlos syndrome, type 4;not provided germline 2 188988099 TTCACATTCCAGGGCCCCCCAGGCCCTCCCGGTCCCCCTGGTACATCTGGTCATCCTGGTT 786204837 172291 NM_003392.4(WNT5A):c.206G>A (p.Cys69Tyr) WNT5A Apr 24, 2015 MedGen:C0265205,OMIM:180700,SNOMED CT:76520005 Robinow syndrome germline 3 55479499 AAGTATATATTATAGGAGCACAGCCTCTCTGCAGCCAACTGGCAGGACTTTCTCAAGGACA 104894176 28748 NM_001083116.2(PRF1):c.1122G>A (p.Trp374Ter) PRF1 Jan 17, 2012 MedGen:C1863727,OMIM:603553;Human Phenotype Ontology:HP:0012539,MedGen:C0024305,OMIM:605027,Orphanet:ORPHA547,SNOMED CT:1929004 Hemophagocytic lymphohistiocytosis, familial, 2;Malignant lymphoma, non-Hodgkin germline 10 70598599 GAGTCAGTACCTGACGGACAGGGCTCGCTGGAGGGACTGCAGCCGGCCGTGCCCACCAGGG 121918428 29058 NM_006179.4(NTF4):c.617G>A (p.Arg206Gln) NTF4 Oct 01, 2009 MedGen:C2751294,OMIM:613100 Glaucoma 1, open angle, O germline 19 49061381 ACACTGCCTGCGTCTGCACACTCCTCAGCCGGACTGGCCGGGCCTGAGACCCATGCCCAGG 104894676 21874 NM_016941.3(DLL3):c.1511G>A (p.Gly504Asp) DLL3 Jul 01, 2004 MedGen:CN032975,OMIM:277300 Spondylocostal dysostosis 1, autosomal recessive germline 19 39507456 CTCCGGCTCTGGGACTGCTCGTGGCCGCGGGCGTGGCCGGCGCTGCGCTCTTGCTGGTCCA 869025331 223759 NM_033380.2(COL4A5):c.2395+1G>A COL4A5 Feb 02, 2016 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive inherited X 108606893 CTGGCTTAGATGGGCTCCCTGGACCAAAAGGTATGGAGGCTGTCACTGCATCTCAACTTGC 121965053 15209 NM_000274.3(OAT):c.1058G>A (p.Gly353Asp) OAT Jun 01, 1992 Human Phenotype Ontology:HP:0012026,MedGen:C0599035,OMIM:258870,SNOMED CT:276426004 Ornithine aminotransferase deficiency germline 10 124400941 AAAACCTTGCTGAAAATGCAGACAAATTGGGCATTATCTTGAGAAATGAACTCATGAAGCT 864321688 216931 NM_020401.3(NUP107):c.969+1G>A NUP107 Oct 01, 2015 MedGen:C4225228,OMIM:616730 Nephrotic syndrome, type 11 germline 12 68713809 GGAAGTGTTCGTCCGCTTGTCACTGAATTGGTAAATGTTCTTTGAAATGAAAGTTGCCTTC 45517371 58485 NM_000548.4(TSC2):c.4829G>A (p.Trp1610Ter) TSC2 Oct 13, 2016 MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000;MedGen:CN517202 Tuberous sclerosis syndrome;not provided germline 16 2086359 GTGGTGAGGACGGCCAGTTCACCTACTGCTGGCACGATGACATCATGCAAGGTACGGCCTG 201278558 259742 NM_003038.4(SLC1A4):c.766G>A (p.Glu256Lys) SLC1A4 Jun 28, 2017 MedGen:C4225254,OMIM:616657,Orphanet:ORPHA447997;MedGen:CN517202 Spastic tetraplegia, thin corpus callosum, and progressive microcephaly;not provided germline;paternal 2 65010729 GACCTCATCCGTTTCTTCAATTCCCTCAACGAGGCGACGATGGTGCTGGTGTCCTGGATTA 121434461 22682 NM_000935.2(PLOD2):c.1793G>A (p.Arg598His) PLOD2 Dec 01, 2004 MedGen:C1836602,OMIM:609220 Bruck syndrome 2 germline 3 146071416 TATGTCATTAATGTTGTTTCTAGGATAGCCGTATATCTGGTGGTTATGAAAATGTCCCAAC 587776700 264553 NM_000256.3(MYBPC3):c.906-1G>A MYBPC3 Jan 26, 2017 MedGen:CN517202 not provided germline 11 47347030 CTCCATTATGGCTGCTGCTGCTGTGGCCCAGAGAGTAAGAATCGGGGTCTGGGTGTTTGGG 869320660 227109 NM_000206.2(IL2RG):c.677G>A (p.Arg226His) IL2RG Jun 19, 2017 MedGen:C1279481,OMIM:300400,SNOMED CT:203592006;MedGen:CN517202 X-linked severe combined immunodeficiency;not provided germline X 71109308 AGAAACGCTACACGTTTCGTGTTCGGAGCCGCTTTAACCCACTCTGTGGAAGTGCTCAGCA 1060502306 404054 NM_002294.2(LAMP2):c.962G>A (p.Trp321Ter) LAMP2 Apr 16, 2016 MedGen:C0878677,OMIM:300257,Orphanet:ORPHA34587,SNOMED CT:419097006 Danon disease germline X 120441861 TCAGCATTGCAAATAACAATCTCAGCTACTGGGATGCCCCCCTGGGAAGTTCTTATATGTG 120074141 17872 NM_000019.3(ACAT1):c.547G>A (p.Gly183Arg) ACAT1 Feb 01, 1992 MedGen:C1536500,OMIM:203750,Orphanet:ORPHA134,SNOMED CT:124258007 Deficiency of acetyl-CoA acetyltransferase germline 11 108139009 GTAAAGCTTGAAGATTTGATTGTAAAAGACGGGCTAACTGATGTCTACAATAAAATTCATA 199473001 78297 NM_000238.3(KCNH2):c.2458G>A (p.Gly820Arg) KCNH2 Mar 19, 2015 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MedGen:CN517202 Congenital long QT syndrome;not provided germline 7 150948990 AACCTGTATGCAAGGCCTGGCAAGTCGAACGGGGATGTGCGGGCCCTCACCTACTGTGACC 267607093 33444 NM_024592.4(SRD5A3):c.320G>A (p.Trp107Ter) SRD5A3 Apr 11, 2016 MedGen:C3150191,OMIM:612379,Orphanet:ORPHA324737 Congenital disorder of glycosylation type 1Q germline;inherited 4 55359444 CTCTGTTCCTGGGAGCACCTTTTCCAAGCTGGCTTCATGGTTTGCTCAGAATTCTCGGGGC 121913038 31699 NM_001113755.2(TYMP):c.457G>A (p.Gly153Ser) TYMP Jan 14, 2016 MedGen:C0872218,OMIM:603041,Orphanet:ORPHA298 Mitochondrial DNA depletion syndrome 1 (MNGIE type) germline 22 50528571 ATCAGCGGACGTGGTCTGGGGCACACAGGAGGCACCTTGGATAAGCTGGAGTCTATTCCTG 397508762 480433 NM_000492.3(CFTR):c.57G>A (p.Trp19Ter) CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline 7 117504256 TATCTGTTCCTCCTCTCTTTATTTTAGCTGGACCAGACCAATTTTGAGGAAAGGATACAGA 724159830 17154 NM_003477.2(PDHX):c.1024-1G>A PDHX Feb 01, 2002 MedGen:C1855553,OMIM:245349,Orphanet:ORPHA255182 Pyruvate dehydrogenase E3-binding protein deficiency germline 11 34984569 TTTAGTAACATTTTTCTTTTTCTATTTCTAGCAAATGCCAGATGTTAATGTAAGCTGGGAT 121912482 29582 NM_000228.2(LAMB3):c.628G>A (p.Glu210Lys) LAMB3 May 01, 2007 MedGen:C0268374,OMIM:226650,Orphanet:ORPHA89840,SNOMED CT:33662006 Adult junctional epidermolysis bullosa unknown 1 209633070 ATTCCAGCAACTCAAAGTCAAAAAATTCAAGGTCAGTGTGGTTACTTCTCTTGTCCATGGA 387907340 51106 NM_021629.3(GNB4):c.158G>A (p.Gly53Asp) GNB4 Apr 22, 2013 MedGen:C3554654,OMIM:615185,Orphanet:ORPHA352670 Charcot-Marie-Tooth disease, dominant intermediate F germline 3 179419444 TACAAATGCGAACAAGACGTACACTGAGGGGCCACCTAGCTAAAATCTATGCTATGCATTG 267608463 165848 NM_004992.3(MECP2):c.377+1G>A MECP2 Dec 03, 2010 MedGen:C0035372,OMIM:312750,Orphanet:ORPHA778,SNOMED CT:68618008;MedGen:CN517202 Rett syndrome;not provided unknown X 154032206 TGCTGGGAAGTATGATGTGTATTTGATCAAGTAAGTAAGAGCAACTCCTATCTCTACAGGG 587777094 102945 NM_052844.3(WDR34):c.1340G>A (p.Arg447Gln) WDR34 Feb 10, 2014 MedGen:C3810200,OMIM:615633 Short-rib thoracic dysplasia 11 with or without polydactyly germline 9 128634258 ATCTGTTTGCTGTGCGCTGGTCCCCAGTGCGGCCCTTGGTTTTTGCAGCTGCCTCTGGGAA -1 439220 NM_015330.4(SPECC1L):c.3293G>A (p.Arg1098Gln) SPECC1L;SPECC1L-ADORA2A Aug 28, 2017 MedGen:CN517202 not provided de novo 22 24414562 AGGACATTAATGAAATGGTACGGACTGAACGACCCGACTGGCAGAACGTGATGCTGTATGT 794726784 187747 NM_001165963.1(SCN1A):c.4223G>A (p.Trp1408Ter) SCN1A Dec 20, 2014 MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002 Severe myoclonic epilepsy in infancy maternal 2 166002533 AACTAATAGAAAGAAATGAGACTGCTCGATGGAAAAATGTGAAAGTAAACTTTGATAATGT 796052642 203765 NM_172107.3(KCNQ2):c.1009G>A (p.Ala337Thr) KCNQ2 Aug 30, 2012 MedGen:CN517202 not provided germline 20 63438639 AAGCACTTTGAGAAGAGGCGGAACCCGGCAGCAGGCCTGATCCAGGTGAGTCCAGGTGTCC 147412276 178868 NM_173689.6(CRB2):c.3746G>A (p.Arg1249Gln) CRB2 Jan 08, 2015 MedGen:C4015555,OMIM:616220 Focal segmental glomerulosclerosis 9 germline 9 123376950 TGGGCCTCCTTTCAGGGATCCTGGCAGCCCGAAAGCGCCGCCAGTCTGAGGGCACCTACAG 104894519 21096 NM_004862.3(LITAF):c.334G>A (p.Gly112Ser) LITAF Jun 26, 2017 MedGen:C0270913,OMIM:601098,Orphanet:ORPHA101083,SNOMED CT:4183003;MedGen:CN517202 Charcot-Marie-Tooth disease, type 1C;not provided germline 16 11553576 ATGATCGTGAGTCAGCTGTCCTATAACGCCGGTGCTCTGACCTGGCTGTCCTGCGGGAGCC 398124530 102372 NM_144997.6(FLCN):c.1533G>A (p.Trp511Ter) FLCN Aug 08, 2017 MedGen:C0346010,OMIM:135150,Orphanet:ORPHA122,SNOMED CT:110985001;MedGen:CN517202 Multiple fibrofolliculomas;not provided germline 17 17214990 CCAGTGCCTCGTCTGCCTCAAGGAGGAGTGGATGAAGTAAGCAACAGTGTGGGTGAGGCCC 587780347 134592 NM_000162.3(GCK):c.706G>A (p.Glu236Lys) GCK Jul 23, 2013 Human Phenotype Ontology:HP:0009800,MedGen:C0085207 Diabetes mellitus, gestational germline 7 44147807 CCAGGCACGGGCTGCAATGCCTGCTACATGGAGGAGATGCAGAATGTGGAGCTGGTGGAGG 587783238 167659 NM_018136.4(ASPM):c.3830G>A (p.Trp1277Ter) ASPM Jan 24, 2014 MedGen:C1837501,OMIM:608716 Primary autosomal recessive microcephaly 5 germline 1 197121955 TAAGAGCTGCTCGACTCATACAAACAACATGGAGAAAATATAAACTAAAAACAGATCTCAA 121908121 19502 NM_025216.2(WNT10A):c.383G>A (p.Arg128Gln) WNT10A May 01, 2012 MedGen:C0796093,OMIM:257980,Orphanet:ORPHA2721;MedGen:C1835492,OMIM:150400;MedGen:CN517202 Odontoonychodermal dysplasia;Tooth agenesis, selective, 4;not provided germline 2 218889990 TGTGTTCTGGGTCTTTAACCACAGGTTTCCGAGAGAGCGCTTTTGCCTACGCCATCGCAGC 201201443 265466 NM_000642.2(AGL):c.2681+1G>A AGL Feb 03, 2017 MedGen:C0017922,OMIM:232400,Orphanet:ORPHA308684,SNOMED CT:66937008 Glycogen storage disease type III germline 1 99884704 AGATCCTATATTAAAAATTCCTTTTGCTTCGTAAGTATGCCTTGTTTGGTAGAGATTTGCC 72554644 209243 NM_000052.6(ATP7A):c.2179G>A (p.Gly727Arg) ATP7A Feb 08, 2013 MedGen:C0022716,OMIM:309400,Orphanet:ORPHA565,SNOMED CT:59178007 Menkes kinky-hair syndrome germline X 78012885 ATGATTATCATTCCTATATTGCAGTTTTTCGGAGGCTGGTACTTCTACATTCAGGCTTATA 121913007 31850 NM_001943.4(DSG2):c.918G>A (p.Trp306Ter) DSG2 Oct 05, 2011 MedGen:C1857777,OMIM:610193;MedGen:CN517202 Arrhythmogenic right ventricular cardiomyopathy, type 10;not provided germline 18 31524792 CGATGCAGATGAAATAGGTTCTGATAATTGGCTGGCAAATTTTACATTTGCATCAGGAAAT 121913150 29739 NM_000208.3(INSR):c.3572G>A (p.Arg1191Gln) INSR Jan 01, 1995 Human Phenotype Ontology:HP:0005978,MedGen:C0011860,OMIM:125853,Orphanet:ORPHA181376,SNOMED CT:44054006 Diabetes mellitus type 2 germline 19 7120707 CCAGAGACATCTATGAAACGGATTACTACCGGAAAGGGGGCAAGGGTCTGCTCCCTGTACG 397514635 48579 NM_001080463.1(DYNC2H1):c.7985G>A (p.Arg2662Gln) DYNC2H1 Jun 01, 2017 MedGen:CN674505;MedGen:C2751311,OMIM:613091,SNOMED CT:254051008 Short-rib polydactyly syndrome type III;Short-rib thoracic dysplasia 3 with or without polydactyly germline;unknown 11 103199373 TATTAGCAGGACGCAGTGGTGTAGGTCGTCGGACCATCACTTCTTTAGTCAGTCACATGCA 80356664 33974 NM_000207.2(INS):c.94G>A (p.Gly32Ser) INS;INS-IGF2 Apr 03, 2015 MedGen:C1852092,OMIM:125852;MedGen:C0158981,Orphanet:ORPHA224,SNOMED CT:49817004;MedGen:C1833104,OMIM:606176,Orphanet:ORPHA99885 Diabetes mellitus, insulin-dependent, 2;Neonatal diabetes mellitus;Permanent neonatal diabetes mellitus germline 11 2160878 GCCGCAGCCTTTGTGAACCAACACCTGTGCGGCTCACACCTGGTGGAAGCTCTCTACCTAG 727503316 176477 NM_016239.3(MYO15A):c.7893+1G>A MYO15A May 21, 2013 MedGen:CN043648,Orphanet:ORPHA87884 Nonsyndromic hearing loss and deafness germline 17 18151952 ACCCACCTGGCAGCTGCACCTGGCACCCAGGTGAGGGGGGAAGGTGGGGCTGAGCCCAGGT 121918726 27532 NM_000359.2(TGM1):c.1175G>A (p.Gly392Asp) TGM1 Apr 01, 2001 MedGen:C3536797,OMIM:242300 Autosomal recessive congenital ichthyosis 1 germline 14 24258658 TTCGCTCCTCCACAGTGCTGCGCTGCCTGGGTCTGGCCACCCGTACTGTCACCAACTTCAA 786202631 184919 NM_007294.3(BRCA1):c.4523G>A (p.Trp1508Ter) BRCA1 Aug 02, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 1;Hereditary cancer-predisposing syndrome;not provided germline 17 43074483 CTTCTAAATGCCCATCATTAGATGATAGGTGGTACATGCACAGTTGCTCTGGGAGTCTTCA 387907248 45605 NM_198253.2(TERT):c.508G>A (p.Val170Met) TERT May 26, 2011 MedGen:C3553617,OMIM:614742 Pulmonary fibrosis and/or bone marrow failure, telomere-related, 1 germline 5 1294378 GTGCTGGTGGCTCCCAGCTGCGCCTACCAGGTGTGCGGGCCGCCGCTGTACCAGCTCGGCG 121908875 21488 NM_000369.2(TSHR):c.2015G>A (p.Cys672Tyr) TSHR Jul 01, 1994 MedGen:C1836706,OMIM:609152,Orphanet:ORPHA424 Hyperthyroidism, nonautoimmune germline 14 81144073 TGCTGGTACTCTTCTATCCACTTAACTCCTGTGCCAATCCATTCCTCTATGCTATTTTCAC 104894792 26528 NM_006579.2(EBP):c.386G>A (p.Trp129Ter) EBP Oct 02, 2000 MedGen:C0282102,OMIM:302960,Orphanet:ORPHA35173 Chondrodysplasia punctata 2 X-linked dominant germline X 48527202 TGTGCATGGAAACCATCACAGCTTGCCTGTGGGGACCACTCAGCCTGTGGGTGGTGATCGC -1 444953 NM_000834.4(GRIN2B):c.1328+1G>A GRIN2B Sep 06, 2016 MedGen:CN517202 not provided germline 12 13616454 AGTCCCCTGCCAAAAACGCATAGTCACTGAGTATGGCATCCTCTCAATGACTTTGGGTGGC 121909296 23212 NM_000337.5(SGCD):c.89G>A (p.Trp30Ter) SGCD May 01, 1997 MedGen:C1832525,OMIM:601287,Orphanet:ORPHA219 Limb-girdle muscular dystrophy, type 2F germline 5 156344574 CACAGGTATACAAGGTGGGGATTTATGGCTGGCGGAAACGATGCCTGTATTTCTTTGTCCT 796053361 202301 NM_003165.3(STXBP1):c.875G>A (p.Arg292His) STXBP1 Nov 09, 2017 MedGen:C2677326,OMIM:612164;MedGen:CN517202 Early infantile epileptic encephalopathy 4;not provided de novo;germline 9 127668160 ACGAGGACGACGACCTGTGGATAGCACTGCGCCACAAGCACATCGCAGAGGTGTCCCAGTA 267607029 24295 NM_199037.4(SCN1B):c.537G>A (p.Trp179Ter) SCN1B Jun 01, 2008 EFO:EFO_0005137,MedGen:C2748542 Cardiac conduction defect, nonspecific germline 19 35033828 CAGATGGCAGGCAGTGGACAGGACAGGCTGGCTCTGTGCCTGGCCAGCCAACCGCCCACAG 104893719 23396 NM_000388.3(CASR):c.1657G>A (p.Gly553Arg) CASR Nov 01, 2007 MedGen:C1809471,OMIM:145980,Orphanet:ORPHA93372,SNOMED CT:190868007 Hypocalciuric hypercalcemia, familial, type 1 germline 3 122282161 AGCCGAGACTGCCTGGCAGGGACCAGGAAAGGGATCATTGAGGGGGAGCCCACCTGCTGCT 387907101 40047 NM_017813.4(IMPAD1):c.529G>A (p.Asp177Asn) IMPAD1 May 13, 2011 MedGen:C3279757,OMIM:614078,Orphanet:ORPHA280586 Chondrodysplasia with joint dislocations, GPAPP type germline 8 56980056 GAAAGTGTTACTGTCTGGATTGACCCACTTGATGCTACACAGGAATATACAGGTAATTTTT 1047420796 485882 NM_017646.5(TRIT1):c.968G>A (p.Arg323Gln) TRIT1 Feb 19, 2018 MedGen:CN807948,OMIM:617873 COMBINED OXIDATIVE PHOSPHORYLATION DEFICIENCY 35 germline 1 39847258 CTCTGAAACAAGTAACTAAGAGATATGCCCGGAAACAAAACCGATGGGTTAAAAACCGTTT 33930165 30165 NM_000518.4(HBB):c.19G>A (p.Glu7Lys) HBB Jun 27, 2017 na;na;MedGen:C0002895,OMIM:603903,Orphanet:ORPHA232,SNOMED CT:127040003;MedGen:C2720293;MedGen:C0005283,OMIM:613985,Orphanet:ORPHA848,SNOMED CT:65959000;MedGen:CN517202;MedGen:CN169374 HEMOGLOBIN ARLINGTON PARK;HEMOGLOBIN C;Hb SS disease;Malaria, resistance to;beta Thalassemia;not provided;not specified germline;unknown 11 5227003 CAAACAGACACCATGGTGCATCTGACTCCTGAGGAGAAGTCTGCCGTTACTGCCCTGTGGG 377767357 36185 NM_005359.5(SMAD4):c.1193G>A (p.Trp398Ter) SMAD4 Dec 04, 2012 MedGen:C0345893,OMIM:174900,Orphanet:ORPHA329971,SNOMED CT:9273005 Juvenile polyposis syndrome not provided 18 51067072 AGTTGGAATGTAAAGGTGAAGGTGATGTTTGGGTCAGGTGCCTTAGTGACCACGCGGTCTT -1 481080 NM_001110556.1(FLNA):c.1065G>A (p.Lys355=) FLNA - MedGen:C1848213,OMIM:300049,OMIM:300537,SNOMED CT:448227009 Periventricular nodular heterotopia 1 de novo X 154366562 GTACGTCCCCGAGGTGACGGGGACTCATAAGGTGAGCCCTTGGCCAGGGGGGAGGCTTGTG 121918485 28352 NM_000506.4(F2):c.1274G>A (p.Arg425His) F2 Aug 15, 2002 MedGen:C0272317,SNOMED CT:33297000 Hereditary factor II deficiency disease germline 11 46728139 AGAACTTCACCGAGAATGACCTTCTGGTGCGCATTGGCAAGCACTCCCGCACCAGGTACAG 786205137 185681 NM_030813.5(CLPB):c.1233G>A (p.Met411Ile) CLPB Sep 14, 2016 MedGen:C4225393,OMIM:616271,Orphanet:ORPHA445038 3-methylglutaconic aciduria with cataracts, neurologic involvement, and neutropenia germline 11 72302328 TTCCACACAGGGCTTCATCAGGCTGGACATGTCCGAGTTCCAGGAGCGACACGAGGTGAGT 118192216 34662 NM_172107.3(KCNQ2):c.998G>A (p.Arg333Gln) KCNQ2 Mar 31, 2016 MedGen:C1852587,OMIM:121200;MedGen:CN517202 Benign familial neonatal seizures 1;not provided germline 20 63438650 AGCACAGGCAGAAGCACTTTGAGAAGAGGCGGAACCCGGCAGCAGGCCTGATCCAGGTGAG 28940588 17166 NM_005787.5(ALG3):c.353G>A (p.Gly118Asp) ALG3 Dec 01, 1999 MedGen:C1832736,OMIM:601110,Orphanet:ORPHA79321 Congenital disorder of glycosylation type 1D germline 3 184245559 TTATGGGGTTGTACTATGCCACCAGCCGAGGCACTGACATCCGCATGGCCCAGAACATCTT 869025273 222975 NM_177987.2(TUBB8):c.5G>A (p.Arg2Lys) TUBB8 Mar 02, 2017 MedGen:C4225210,OMIM:616780 Oocyte maturation defect 2 germline 10 49234 CCTGCCGTCCTAATCCCGCCTTGGCCATGAGGGAGATCGTGCTCACGCAGATCGGGCAGTG 63749823 21619 NM_001171.5(ABCC6):c.3961G>A (p.Gly1321Ser) ABCC6 May 10, 2002 MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16154953 GGGCTGCTGCGGCTCCAGGAGGCAGCTGAGGGTGGGATCTGGATCGACGGGGTCCCCATTG 1131691794 422077 NM_000548.4(TSC2):c.500G>A (p.Trp167Ter) TSC2 May 17, 2017 MedGen:CN517202 not provided germline 16 2055420 CTTCTCCCCCAGCTGACTTTGTCCTGCAGTGGATGGATGTTGGCTTGTCCTCGGAATTCCT 79389353 20821 NM_014270.4(SLC7A9):c.544G>A (p.Ala182Thr) SLC7A9 Nov 08, 2017 Human Phenotype Ontology:HP:0003131,MedGen:C0010691,OMIM:220100,Orphanet:ORPHA214,SNOMED CT:85020001;MedGen:CN517202 Cystinuria;not provided germline 19 32862521 CTGGGAAGCTACGTCCAGAACATCTTCACCGCGGCCAAGCTGGTGATCGTGGCCATCATCA 112738974 51780 NM_000256.3(MYBPC3):c.2308+1G>A MYBPC3 Jan 26, 2017 MedGen:C1861862,OMIM:115197;Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Familial hypertrophic cardiomyopathy 4;Hypertrophic cardiomyopathy;Primary familial hypertrophic cardiomyopathy;not provided germline 11 47338519 ACCAGGTCAACCTCACAGTCAAGGTCATCGGTGAGGCCGGCCGGGGTCCAAGCTGGAGAAC 80359861 34085 NM_001017420.2(ESCO2):c.1131+1G>A ESCO2 Oct 02, 2008 MedGen:C0392475,OMIM:268300,OMIM:269000,SNOMED CT:48718006 Roberts-SC phocomelia syndrome not provided 8 27788003 AGTAAAAAAACAAAAGACCAGCTCATCATCGTGAGTAAATTCCAAACAAAGCTTCTCCTAT 773516672 244641 NM_000051.3(ATM):c.7449G>A (p.Trp2483Ter) ATM Mar 31, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline 11 108330355 CTTATTAAGTGGAGAAGAACATGATATGTGGGTATTCCGACTTTGTTCCCTCTGGCTTGAA 104894359 27636 NM_004985.4(KRAS):c.178G>A (p.Gly60Ser) KRAS Oct 24, 2017 MedGen:C1860991,OMIM:609942;MedGen:CN517202 Noonan syndrome 3;not provided germline 12 25227346 ACCTGTCTCTTGGATATTCTCGACACAGCAGGTCAAGAGGAGTACAGTGCAATGAGGGACC 749225304 263792 NM_005993.4(TBCD):c.1876G>A (p.Ala626Thr) TBCD Nov 16, 2016 MedGen:C4310671,OMIM:617193 Encephalopathy, progressive, early-onset, with brain atrophy and thin corpus callosum germline 17 82906007 CACATGAGGCATGGGTCGATTCTCGCCTGCGCAGAAGTTGCTTACGCCTTGTACAAACTTG 121909682 31244 NM_000821.6(GGCX):c.1427G>A (p.Arg476His) GGCX Mar 01, 2007 MedGen:C1835813,OMIM:610842,Orphanet:ORPHA91135 Pseudoxanthoma elasticum-like disorder with multiple coagulation factor deficiency germline 2 85552428 ACTTTGATATTTGGGTCTCCATCAATGACCGCTTCCAGCAGAGGTGGGCAAGGGGAGCAGA 587779424 106855 NM_000090.3(COL3A1):c.2823+1G>A (p.Gly942Valfs*28) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189004144 AAGGGATCGCCTGGTGCCCAGGGCCCACCAGTAAGTAACTTCATTTTTTTAAATTGATTCT 863225085 214070 NM_000466.2(PEX1):c.3750G>A (p.Trp1250Ter) PEX1 Oct 01, 2015 MedGen:C1856186,OMIM:234580,Orphanet:ORPHA3220 Deafness enamel hypoplasia nail defects germline 7 92489310 CACAAGACCATCCATTAGTGAAGATGACTGGAAGAATTTTGCTGAGCTGTAAGTAACAGAT 1057518864 361037 NM_001243226.2(TCF4):c.806-1G>A TCF4 Jun 02, 2015 Human Phenotype Ontology:HP:0000463,MedGen:C1840077;Human Phenotype Ontology:HP:0002307,MedGen:C0013132;Human Phenotype Ontology:HP:0000286,MedGen:C1303004;Human Phenotype Ontology:HP:0008872,MedGen:C2674608;Human Phenotype Ontology:HP:0001263,MedGen:C4020875;Human Phenotype Ontology:HP:0003196,MedGen:C1854114;Human Phenotype Ontology:HP:0000733,MedGen:C0038273 Anteverted nares;Drooling;Epicanthus;Feeding difficulties in infancy;Global developmental delay;Short nose;Stereotypy unknown 18 55350409 GGGAGCTGAAAGCATCTTCATTTTCTTTCAGAGGTACAGACAAAGAAAGTTCGAAAAGTTC -1 441958 NM_002087.3(GRN):c.599-1G>A GRN Mar 10, 2017 MedGen:CN517202 not provided germline 17 44350690 TGGCTGCCCCTCACGTTTGCTCCTCTTCCAGTGGCCTTGTCCAGCTCGGTCATGTGTCCGG 988031901 359563 NM_000094.3(COL7A1):c.7485+5G>A COL7A1 May 02, 2016 MedGen:CN517202 not provided germline 3 48570129 GCCAGGAGGGACCCCGAGGACTCACGGTGGGTCCCGCTGGGGAAAGTGACAGTGCTGTGAC 132630307 26101 NM_000252.2(MTM1):c.469G>A (p.Glu157Lys) MTM1 Aug 01, 2003 MedGen:C0410203,OMIM:310400,Orphanet:ORPHA596,SNOMED CT:46804001 Severe X-linked myotubular myopathy germline X 150638967 TTCTAGCCATTATTTGCATTTTTAAATGAAGAAAAGTTTAACGTGGATGGATGGACAGTTT 5030821 17255 NM_000551.3(VHL):c.500G>A (p.Arg167Gln) VHL Jul 31, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0019562,OMIM:193300,Orphanet:ORPHA892,SNOMED CT:46659004;MedGen:CN517202;MedGen:CN169374 Hereditary cancer-predisposing syndrome;Von Hippel-Lindau syndrome;not provided;not specified germline;unknown 3 10149823 CTCTGAAAGAGCGATGCCTCCAGGTTGTCCGGAGCCTAGTCAAGCCTGAGAATTACAGGAG 397508045 67476 NM_000059.3(BRCA2):c.92G>A (p.Trp31Ter) BRCA2 Sep 08, 2016 MedGen:C2675520,OMIM:612555;MedGen:C0677776,Orphanet:ORPHA145 Breast-ovarian cancer, familial 2;Hereditary breast and ovarian cancer syndrome germline 13 32319101 AAATAGATTTAGGACCAATAAGTCTTAATTGGTTTGAAGAACTTTCTTCAGAAGCTCCACC 121434590 29175 NM_002472.2(MYH8):c.2021G>A (p.Arg674Gln) MYH8 May 31, 2016 MedGen:C1837245,OMIM:608837,Orphanet:ORPHA319340;MedGen:C0265226,OMIM:158300,Orphanet:ORPHA3377,SNOMED CT:8757006;MedGen:CN517202 Carney complex variant;Hecht syndrome;not provided germline 17 10406924 ATCTGAGGAGCACACACCCTCACTTCGTACGGTGTATCATTCCCAATGAAACCAAAACTCC 80358254 33989 NM_000271.4(NPC1):c.2974G>A (p.Gly992Arg) NPC1 Oct 21, 2016 MedGen:C3179455,OMIM:257220;MedGen:CN517202 Niemann-Pick disease type C1;not provided germline;unknown 18 23538609 CTGACTCCGGAAGGCAAACAGAGGCCTCAGGGGGGAGACTTCATGAGATTCCTGCCCATGT 111033694 36512 NM_000155.3(GALT):c.443G>A (p.Arg148Gln) GALT Jun 14, 2017 MedGen:C0268151,OMIM:230400,Orphanet:ORPHA79239,SNOMED CT:124354006 Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase germline 9 34647897 CGCTGCCACTCATGTCGGTCCCTGAGATCCGGGCTGTTGTTGATGCATGGGCCTCAGTCAC 119450941 17501 NM_000026.3(ADSL):c.1277G>A (p.Arg426His) ADSL Sep 12, 2017 MedGen:C0268126,OMIM:103050,Orphanet:ORPHA46,SNOMED CT:15285008;MedGen:C0268126,OMIM:103050,Orphanet:ORPHA46,SNOMED CT:15285008;MedGen:CN517202 Adenylosuccinate lyase deficiency;Adenylosuccinate lyase deficiency;not provided germline 22 40364965 AGGAAGGGGGTGACAATGACCTCATAGAGCGTATCCAGGTTGATGCCTACTTCAGTCCCAT 875989869 227882 NM_000016.5(ACADM):c.469-1G>A ACADM Feb 20, 2015 MedGen:C0220710,OMIM:201450,Orphanet:ORPHA42,SNOMED CT:128596003 Medium-chain acyl-coenzyme A dehydrogenase deficiency germline 1 75739979 ATTTCATTTCTCTTGTTTTTATATATTCAAGGCTTATTGTGTAACAGAACCTGGAGCAGGC 121917912 79425 NM_006920.4(SCN1A):c.3701G>A (p.Arg1234Gln) SCN1A Apr 30, 2014 MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002;MedGen:CN517202 Severe myoclonic epilepsy in infancy;not provided germline;unknown 2 166012254 AGGCATTTGAAGATATATATATTGATCAGCGAAAGACGATTAAGACGATGTTGGAATATGC 1057519347 362110 NM_024876.3(COQ8B):c.1430G>A (p.Arg477Gln) COQ8B Jun 07, 2016 MedGen:C3809965,OMIM:615573 Nephrotic syndrome, type 9 germline 19 40692240 AGGACCTCATCCCGGTGCTGCTGCGGCACCGGCTGTGTCCCCCACCCGAGGAGACCTATGC 80358178 46121 NM_007294.3(BRCA1):c.4096+1G>A BRCA1 Nov 01, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 1;Familial cancer of breast;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided germline 17 43091434 AAGAAGAGCAAAGCATGGATTCAAACTTAGGTATTGGAACCAGGTTTTTGTGTTTGCCCCA 121917724 15252 NM_000285.3(PEPD):c.1342G>A (p.Gly448Arg) PEPD Oct 01, 2002 MedGen:C0268532,OMIM:170100 Prolidase deficiency germline 19 33387892 GAGGTCCTGCAGCGCTTTCGCGGTTTTGGCGGGGTGAGTGCCCACGGGCCCCATTCTTGCT 74315375 21002 NM_006996.2(SLC19A2):c.1074G>A (p.Trp358Ter) SLC19A2 Sep 01, 2000 MedGen:C0342287,OMIM:249270,Orphanet:ORPHA49827,SNOMED CT:237617006 Megaloblastic anemia, thiamine-responsive, with diabetes mellitus and sensorineural deafness germline 1 169468793 GTTTGCAGTTGGTTATATAAAAATATCCTGGTCAACTTGGGGAGAAATGACATTATCTCTC 1085307308 414256 NM_001204.6(BMPR2):c.1171G>A (p.Ala391Thr) BMPR2 - MedGen:C0152171,OMIM:178600,SNOMED CT:26174007 Primary pulmonary hypertension germline 2 202532627 AGATATATGGCACCAGAAGTGCTAGAAGGAGCTGTGAACTTGAGGGACTGTGAATCAGCTT 556977618 170962 NM_015506.2(MMACHC):c.276G>A (p.Glu92=) MMACHC Aug 01, 2013 MedGen:C1848561,OMIM:277400,Orphanet:ORPHA26 Methylmalonic acidemia with homocystinuria germline 1 45507550 TGTGGCCTACCATCTGGGCCGTGTTAGAGAGGTGAGGAAGGCTCAGTTTTCCCCCAGCTCC 758432471 226500 NM_002074.4(GNB1):c.229G>A (p.Gly77Ser) GNB1 Feb 10, 2016 Human Phenotype Ontology:HP:0001263,MedGen:C4020875;Human Phenotype Ontology:HP:0001252,MedGen:C0026827 Global developmental delay;Muscular hypotonia de novo 1 1806513 TCCAGGCTTCTCGTCAGTGCCTCGCAGGATGGTAAACTTATCATCTGGGACAGCTACACCA -1 470931 NM_000206.2(IL2RG):c.720G>A (p.Trp240Ter) IL2RG Aug 01, 2016 MedGen:C1279481,OMIM:300400,SNOMED CT:203592006 X-linked severe combined immunodeficiency germline X 71109265 CTGTGGAAGTGCTCAGCATTGGAGTGAATGGAGCCACCCAATCCACTGGGGGAGCAATACT 483352891 136647 NM_000271.4(NPC1):c.2366G>A (p.Arg789His) NPC1 - MedGen:C3179455,OMIM:257220 Niemann-Pick disease type C1 germline 18 23541313 TCGTGAGTCTCTTGGGGTTAGACATTAAACGTCAAGAGGTAAGTTGGTGCCAGGATTATAG 137853583 28679 NM_000175.4(GPI):c.1040G>A (p.Arg347His) GPI Mar 01, 1993 MedGen:C3150730,OMIM:613470,Orphanet:ORPHA712 Hemolytic anemia, nonspherocytic, due to glucose phosphate isomerase deficiency germline 19 34394044 CCATGCTGCCCTATGACCAGTACCTGCACCGCTTTGCTGCGTACTTCCAGCAGGTACCAGC 118204104 16493 NM_000190.3(HMBS):c.91G>A (p.Ala31Thr) HMBS Jan 01, 1994 MedGen:C0162565,OMIM:176000,Orphanet:ORPHA79276,SNOMED CT:234422006 Acute intermittent porphyria germline 11 119088638 AGGACTAATCCAAGTCTCTACCCGCAGCTTGCTCGCATACAGACGGACAGTGTGGTGGCAA 28940583 17488 NM_000434.3(NEU1):c.649G>A (p.Val217Met) NEU1 Jan 28, 2017 MedGen:C0268228;MedGen:C0268226,OMIM:256550;MedGen:CN517202 Sialidosis type I;Sialidosis, type II;not provided germline 6 31860588 CAGCGGGAGCCACGGAAGGGCCGCCTCATCGTGTGTGGCCATGGGACGCTGGAGCGGGACG 80358010 70377 NM_007294.3(BRCA1):c.80+1G>A BRCA1 Oct 02, 2015 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome germline 17 43124016 TATGCAGAAAATCTTAGAGTGTCCCATCTGGTAAGTCAGCACAAGAGTGTATTAATTTGGG 863225025 213793 NM_000530.7(MPZ):c.410G>A (p.Gly137Asp) MPZ Sep 03, 2015 MedGen:C0270912,OMIM:118200,Orphanet:ORPHA101082,SNOMED CT:42986003 Charcot-Marie-Tooth disease, demyelinating, type 1b germline 1 161306746 GTGACGTCAAAAACCCTCCAGACATAGTGGGCAAGACCTCTCAGGTCACGCTGTATGTCTT 869025293 223294 NM_015160.2(PMPCA):c.1543G>A (p.Gly515Arg) PMPCA Oct 12, 2016 MedGen:C1859298,OMIM:213200,Orphanet:ORPHA1170 Spinocerebellar ataxia, autosomal recessive 2 germline 9 136423229 CACATCCAGACCGCCCTGTCGAGTAAGGACGGGCGCCTGCCCAGGACGTACCGGCTCTTCC 879254774 245957 NM_000527.4(LDLR):c.1061-1G>A LDLR Mar 30, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11111513 TCCCCACCAAGCCTCTTTCTCTCTCTTCCAGATATCGATGAGTGTCAGGATCCCGACACCT 863225046 213911 NM_000334.4(SCN4A):c.4370G>A (p.Arg1457His) SCN4A May 01, 2015 MedGen:C3502630,OMIM:614198 Congenital myasthenic syndrome, acetazolamide-responsive germline 17 63941912 TCCGTGTGATCCGCCTGGCGCGGATTGGGCGTGTCCTGCGGCTGATCCGCGGGGCCAAGGG 587777464 143135 NM_001128849.1(SMARCA4):c.3239G>A (p.Gly1080Asp) SMARCA4 May 01, 2014 MedGen:C2750074,OMIM:613325 Rhabdoid tumor predisposition syndrome 2 unknown 19 11027807 ACTCCAGGCTGGACCTGTACCGAGCCTCGGGTAAATTTGAGCTTCTTGATAGAATTCTTCC 72554664 25428 NM_000402.4(G6PD):c.1478G>A (p.Arg493His) G6PD May 24, 2017 MedGen:C2720289,OMIM:300908,Orphanet:ORPHA466026;na;na;na;na;na;MedGen:CN169374 Anemia, nonspherocytic hemolytic, due to G6PD deficiency;G6PD ANANT;G6PD DHON;G6PD KAIPING;G6PD PETRICH-LIKE;G6PD SAPPORO-LIKE;not specified germline X 154532257 CCCTCAGCGACGAGCTCCGTGAGGCCTGGCGTATTTTCACCCCACTGCTGCACCAGATTGA 886041768 265000 NM_000444.5(PHEX):c.2147+1G>A PHEX May 24, 2016 MedGen:CN517202 not provided germline X 22245410 AATTGGTGCTCACAGTCCCCCTCAGTTTAGGTAAATGGGCAAATGGGTGACGGCAGTTTTT 886037778 225795 NM_001002841.1(MYL4):c.31G>A (p.Glu11Lys) MYL4 Feb 26, 2016 MedGen:CN204347,Orphanet:ORPHA334 Familial atrial fibrillation inherited 17 47209453 ATGGCTCCCAAGAAGCCTGAGCCTAAGAAGGAGGCAGCCAAGCCAGCTCCAGCTCCAGCTC 121912836 32477 NM_000094.3(COL7A1):c.6127G>A (p.Gly2043Arg) COL7A1 Nov 10, 2015 MedGen:C0432322,OMIM:131750,Orphanet:ORPHA231568;MedGen:CN517202 Generalized dominant dystrophic epidermolysis bullosa;not provided germline 3 48575392 GCCGGGGAGCCTGGAAAGCCTGGTATTCCCGGGCTCCCAGGCAGGGCTGGGGGTGTGGGAG 200780796 75261 NM_015375.2(DSTYK):c.86G>A (p.Arg29Gln) DSTYK Jan 25, 2018 Gene:100034704,MedGen:C1835826,OMIM:610805 Congenital anomalies of kidney and urinary tract 1, susceptibility to germline 1 205211450 GCGGCGGCGGAATGATCCGCGAGCTGTGCCGGGGCTTCGGCCGCTACCGCCGCTACCTGGG 121918233 16479 NM_015697.7(COQ2):c.437G>A (p.Ser146Asn) COQ2 Jun 07, 2016 MedGen:CN229570,Orphanet:ORPHA35656;MedGen:C1843920,OMIM:607426 Coenzyme Q10 deficiency, primary;Coenzyme Q10 deficiency, primary 1 germline 4 83279081 CCTGGCTTCTGTATTTACCATGTACCTGGAGCATTGGTTTGGCAGCTGAACCAGGTTGTTT 1057520631 369748 NM_003165.3(STXBP1):c.794+5G>A STXBP1 Sep 14, 2017 MedGen:CN517202 not provided germline 9 127666301 CTGCCTATCGAAAATGATGTATACAAGTAAGTATAGTGTTACAGACCCCAGAGTGTATACG 118204021 16649 NM_024884.2(L2HGDH):c.164G>A (p.Gly55Asp) L2HGDH Nov 15, 2004 Human Phenotype Ontology:HP:0040144,MedGen:C1855995,OMIM:236792,Orphanet:ORPHA79314 L-2-hydroxyglutaric aciduria germline 14 50302994 TTTGAAGCTCATTTGATATAGTCATCGTTGGTGGCGGAATTGTGGGGCTTGCCTCTGCCAG 180177281 200567 NM_000030.2(AGXT):c.846+1G>A AGXT Nov 27, 2014 MedGen:C0268164,OMIM:259900,Orphanet:ORPHA93598,SNOMED CT:65520001 Primary hyperoxaluria, type I germline 2 240876005 AGAGAGAGCCTGGCCCTCATTGCGGAACAGGTGCATGGGCTGCACTCCACAGGAGGAGACA 63750607 426866 NM_001171.5(ABCC6):c.3608G>A (p.Gly1203Asp) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16161463 GCAAAGCCCACCTCAGTGCTGGCCTCGTGGGCTTCTCTGTCTCTGCTGCCCTCCAGGTACT 199564797 264017 NM_020451.2(SELENON):c.872G>A (p.Arg291Gln) SELENON Mar 03, 2016 MedGen:CN517202 not provided germline 1 25809150 TCAGCGACTTCTACTACACTGTGATGTTCCGGTGAGTGGGCCACACTGGCTGGCCTGGAGC 727504059 177897 NM_015560.2(OPA1):c.870+1G>A OPA1 Jul 24, 2017 MedGen:C0338508,OMIM:165500,Orphanet:ORPHA98672,SNOMED CT:2065009;na Dominant hereditary optic atrophy;Ocular impairment germline;unknown 3 193637282 AGTTATAATACGCAAGATCATCTGCCACGGGTATGTGAAAAATTGATAGTGAACTTGCCAA 786201003 185938 NM_052867.3(NALCN):c.3542G>A (p.Arg1181Gln) NALCN Jan 13, 2016 MedGen:C4225398,OMIM:616266;MedGen:CN228792 Congenital contractures of the limbs and face, hypotonia, and developmental delay;Intellectual disability with episodic ataxia and congenital arthrogryposis de novo 13 101083752 ATCAGAGAAGATGGGAAGACCTGAAGAGCCGACTGAAGATCGCACAGCCTCTTCATCTTCC 369698072 45728 NM_015909.3(NBAS):c.5741G>A (p.Arg1914His) NBAS Sep 13, 2017 MedGen:C3541319,OMIM:614800,Orphanet:ORPHA391677;MedGen:CN517202 Short stature, optic nerve atrophy, and Pelger-Huet anomaly;not provided germline 2 15238670 TTCTTTTTTTTAAGCTGTCTGTGGAAGCCCGTAAAGAGATGACTAGAAAGGCTATTAAGAC 587777020 75238 NM_002067.4(GNA11):c.542G>A (p.Arg181Gln) GNA11 Jun 27, 2013 MedGen:C3809243,OMIM:615361 Hypocalcemia, autosomal dominant 2 germline 19 3115009 GCTACCTGCCCACCCAGCAGGACGTGCTGCGGGTCCGCGTGCCCACCACCGGCATCATCGA 869312227 223819 NM_000169.2(GLA):c.1118G>A (p.Gly373Asp) GLA Dec 14, 2016 Human Phenotype Ontology:HP:0001071,MedGen:C0002986,OMIM:301500,Orphanet:ORPHA324,SNOMED CT:16652001;MedGen:CN517202 Fabry disease;not provided germline X 101397981 GCTCTTATACCATCGCAGTTGCTTCCCTGGGTAAAGGAGTGGCCTGTAATCCTGCCTGCTT 281860268 46934 NM_005211.3(CSF1R):c.1766G>A (p.Gly589Glu) CSF1R Aug 30, 2012 Gene:8156,MedGen:C1857300,OMIM:221820 Hereditary diffuse leukoencephalopathy with spheroids not provided 5 150061583 GACCTGTGTGCGTGGCAGGTAAGACCCTCGGAGCTGGAGCCTTTGGGAAGGTGGTGGAGGC 104886348 35842 NM_000495.4(COL4A5):c.2245-1G>A COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108606741 TTTGTTGTGTTTTGTCATGTGTATGCTCAAGGGTGAACCAGGATTTGCATTACCTGGGCCA 886042046 264105 NM_003042.3(SLC6A1):c.1648G>A (p.Gly550Arg) SLC6A1 Oct 10, 2016 MedGen:CN517202 not provided germline 3 11034651 ATGGCTCTGTCTTCCATGGTCCTCATCCCCGGGTACATGGCCTACATGTTCCTCACCTTAA 397515584 76687 NM_194248.2(OTOF):c.1607G>A (p.Trp536Ter) OTOF Apr 26, 2011 MedGen:C1832828,OMIM:601071 Deafness, autosomal recessive 9 not provided 2 26480982 CAGGCTTCCTGCCCACACTGGGCCCAGCCTGGGTGAACATGTACGGCTCCACACGTAACTA 387906740 38986 NM_001376.4(DYNC1H1):c.4552G>A (p.Glu1518Lys) DYNC1H1 Mar 01, 2012 MedGen:C3281202,OMIM:614563 Mental retardation, autosomal dominant 13 germline 14 102002546 TCCCTCCTGTCTGCCCACCAGGTTTTTGAAGAGGATGCTCTCAGCTGGGAAGATAAGCTGA 770380730 440126 NM_001080463.1(DYNC2H1):c.1289G>A (p.Arg430His) DYNC2H1 Jun 01, 2017 MedGen:C0265275,Orphanet:ORPHA474,SNOMED CT:75049004 Jeune thoracic dystrophy paternal 11 103120965 CATTCCTGAAATATAAAGAGTTGGTAAAGCGTCCAACTATAAGCAAAGAATTGATGTTAGA 104893646 28931 NM_005378.5(MYCN):c.1178G>A (p.Arg393His) MYCN May 01, 2005 MedGen:C0796068,OMIM:164280 Feingold syndrome 1 germline 2 15945880 GCAGAAACCACAACATCCTGGAGCGCCAGCGCCGCAACGACCTTCGGTCCAGCTTTCTCAC 398123238 98500 NM_000181.3(GUSB):c.866G>A (p.Trp289Ter) GUSB Oct 14, 2013 MedGen:C0085132,OMIM:253220,Orphanet:ORPHA584 Mucopolysaccharidosis type VII germline 7 65976061 AACTTAAGGTGCCAGGTGTCAGCCTCTGGTGGCCGTACCTGATGCACGAACGCCCTGCCTA 28931608 31946 NM_000941.2(POR):c.1370G>A (p.Arg457His) POR Mar 18, 2016 MedGen:C1860042,OMIM:201750;MedGen:C2673964,OMIM:613571 Antley-Bixler syndrome with genital anomalies and disordered steroidogenesis;Disordered steroidogenesis due to cytochrome p450 oxidoreductase deficiency germline 7 75985179 TGTGTGAGCTGCTGCCGCGCCTGCAGGCCCGCTACTACTCCATCGCCTCATCCTCCAAGGT 121907988 18907 NM_006623.3(PHGDH):c.1273G>A (p.Val425Met) PHGDH Dec 01, 2000 MedGen:C1866174,OMIM:601815 Phosphoglycerate dehydrogenase deficiency germline 1 119742870 GAGCAAGGCTTCGGGGAATGCCTCCTGGCCGTGGCCCTGGCAGGCGCCCCTTACCAGGCTG 387907051 39874 NM_152722.4(HEPACAM):c.631G>A (p.Asp211Asn) HEPACAM Apr 08, 2011 MedGen:C3151355,OMIM:613925 Megalencephalic leukoencephalopathy with subcortical cysts 2a germline 11 124923807 GTGCTCACCATCACCCGCGTGCTCATGGAGGATGACGACCTGTACAGCTGCATGGTGGAGA 780882740 214305 NM_019892.5(INPP5E):c.1021G>A (p.Gly341Ser) INPP5E Feb 23, 2015 Human Phenotype Ontology:HP:0002335,MedGen:C0431399,Orphanet:ORPHA475,SNOMED CT:253175003,SNOMED CT:716997004 Joubert syndrome unknown 9 136434050 CAGGACCTGTATGTCATCGGGGTCCAGGAGGGCTGTTCTGACAGGTAGGGCGGCTGCAGGC 138004478 106537 NM_020800.2(IFT80):c.721G>A (p.Gly241Arg) IFT80 Feb 01, 2011 MedGen:C1970005,OMIM:611263 Asphyxiating thoracic dystrophy 2 germline 3 160356069 CCCATTACTTCAGTTGCCTGGGCTCCAGATGGAGAATTATTTGCTGTTGGATCGTTTCATA 398123460 99133 NM_000532.4(PCCB):c.183+1G>A PCCB Sep 14, 2012 Human Phenotype Ontology:HP:0003353,MedGen:C0268579,OMIM:606054,Orphanet:ORPHA35 Propionic acidemia germline 3 136250559 CAACGCCGTATTGACGCGCAGCACAAGCGAGTGAGTCCTGAGGGGCCTAAGTGAGTCCCGC 74315286 19423 NM_057176.2(BSND):c.3G>A (p.Met1Ile) BSND Nov 01, 2001 MedGen:C1865270,OMIM:602522 Bartter syndrome type 4 germline 1 54999189 GTGCAGGCCAGGGACTGGCCAGGCAGCCATGGCTGACGAGAAGACCTTCCGGATCGGCTTC 145138923 98271 NM_000048.3(ASL):c.35G>A (p.Arg12Gln) ASL Sep 22, 2017 MedGen:C0268547,OMIM:207900,Orphanet:ORPHA23,SNOMED CT:41013004;MedGen:CN517202 Argininosuccinate lyase deficiency;not provided germline;unknown 7 66081825 CTGGCCAGAGTGGGAAGCTTTGGGGTGGCCGGTTTGTGGGTGCAGTGGACCCCATCATGGA 794729673 199872 NM_032415.5(CARD11):c.146G>A (p.Cys49Tyr) CARD11 Apr 27, 2015 MedGen:CN231446,OMIM:616452 B-cell expansion with NFKB and T-cell anergy germline 7 2947649 CTGCCAAGCTCACGCCCTACCTGCGTCAGTGTAAGGTCATTGATGAGCAGGATGAAGATGA 62654395 104996 NM_000350.2(ABCA4):c.194G>A (p.Gly65Glu) ABCA4 Jan 01, 2016 MeSH:C535804,MedGen:C1855465,OMIM:248200;MedGen:CN517202 Stargardt disease 1;not provided germline 1 94111546 ATTTCCCCAACAAGGCGATGCCCTCAGCAGGAATGCTGCCGTGGCTCCAGGGGATCTTCTG -1 444344 NM_004959.4(NR5A1):c.938G>A (p.Arg313His) NR5A1 Sep 08, 2017 MedGen:CN517202 not provided germline 9 124493082 GCGAGCTGCTGGTGTTCGACCACATCTACCGCCAGGTCCAGCACGGCAAGGAGGGCAGCAT 398123375 98868 NM_000426.3(LAMA2):c.4523+1G>A LAMA2 Feb 12, 2013 MedGen:C1263858,OMIM:607855,Orphanet:ORPHA258,SNOMED CT:111503008 Merosin deficient congenital muscular dystrophy germline 6 129349385 ACGGGGATATGAAGGCCAGTACTGTGAAAGGTACCAACAGCCATGAAACGTACAGAGTAAT 1064795352 410127 NM_032043.2(BRIP1):c.2448G>A (p.Trp816Ter) BRIP1 May 19, 2017 MedGen:CN517202 not provided germline 17 61715995 ATTGAGAGGTCTTCTACCTGGCCGTCAGTGGTATGAAATTCAAGCATACAGGGCCTTAAAC 727503211 175199 NM_000256.3(MYBPC3):c.966G>A (p.Trp322Ter) MYBPC3 Mar 20, 2017 Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Hypertrophic cardiomyopathy;Primary familial hypertrophic cardiomyopathy;not provided germline 11 47346331 GCTGGAGGCACCAGCAGAGGAGGACGTGTGGGAGATCCTACGGCAGGCACCCCCATCTGAG 752207334 207048 NM_025180.4(CEP63):c.1068-1G>A CEP63 May 27, 2015 MedGen:C3553582,OMIM:614728 Seckel syndrome 6 germline 3 134549061 TTAAGTATGGGATCTTATTTTTGTCATACAGTTTGGAATCTGTGAGTGCAACGTGTAAACA 104894593 16602 NM_000263.3(NAGLU):c.1928G>A (p.Arg643His) NAGLU Jan 01, 1999 MedGen:C0086648,OMIM:252920,Orphanet:ORPHA79270,SNOMED CT:59990008 Mucopolysaccharidosis, MPS-III-B germline 17 42543934 CCGAGGCCGATTTCTACGAGCAGAACAGCCGCTACCAGCTGACCTTGTGGGGGCCAGAAGG 137853100 23145 NM_006261.4(PROP1):c.296G>A (p.Arg99Gln) PROP1 Jan 01, 2003 MedGen:C0878683,OMIM:262600 Pituitary hormone deficiency, combined 2 germline 5 177994152 GGAGGAACCAGTACCCCGACATCTGGGCCCGAGAGAGTCTTGCCCGGGACACTGGCCTCAG 754289857 373270 NM_000494.3(COL17A1):c.332-1G>A COL17A1 May 28, 2015 MedGen:CN517202 not provided germline 10 104074232 ATTTGTTCTAAGTGTTTCATCCCCTCTCCAGGGAGCTCCAGTGGCAACTCTTCTCCGGAGT 886039403 260024 NM_000424.3(KRT5):c.555+1G>A KRT5 May 12, 2015 MedGen:CN517202 not provided germline 12 52519741 AACAATAAGTTTGCCTCCTTCATCGACAAGGTGAGCTACGATCTTTTGTAAAAAATCACTG 397509418 75098 NM_021942.5(TRAPPC11):c.1287+5G>A TRAPPC11 Dec 07, 2017 MedGen:C3809236,OMIM:615356;MedGen:CN517202 Limb-girdle muscular dystrophy, type 2S;not provided biparental;germline;inherited 4 183684059 TGAAGGAGAGAAATGTTGTTCACTCTGTAAGTTTTGTGTCCAATATAAACTATTTTTTACA 886039801 260906 NM_198428.2(BBS9):c.2115+1G>A BBS9 - MedGen:C0752166,OMIM:209900,Orphanet:ORPHA110,SNOMED CT:5619004 Bardet-Biedl syndrome germline 7 33388145 GACACCTTGTTAGATGGAACCTACAAGCAGGTCAGTATAATATCAGTAACAGTTTTCTATT 587777395 136562 NM_001257360.1(AMPD2):c.2021G>A (p.Arg674His) AMPD2 Aug 01, 2013 MedGen:C4014354,OMIM:615809,Orphanet:ORPHA369920 Pontocerebellar hypoplasia, type 9 germline 1 109629487 TTGCCAACATGGCCATGTTGAACCACCTGCGCAGGTGCCTGCACCACCCTGTGTCTGCTTG 121909149 22590 NM_001122681.1(SH3BP2):c.1244G>A (p.Arg415Gln) SH3BP2 Jun 01, 2001 MedGen:C0008029,OMIM:118400,Orphanet:ORPHA184,SNOMED CT:76098004 Fibrous dysplasia of jaw germline 4 2831573 TCCTGCCTTCCTCTCCCTGCCCCTCCAGGCGATCACCCCCCGATGGGCAGAGTTTCAGGAG 104886232 35955 NM_000495.4(COL4A5):c.3257G>A (p.Gly1086Asp) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108655341 CTTTTTATTCGTGTTTTCAGGGTGAGCCTGGTCTGCCTGGATACCCAGGGAACCCTGGTAT 104893984 17490 NM_000434.3(NEU1):c.87G>A (p.Trp29Ter) NEU1 Oct 01, 2001 MedGen:C0268226,OMIM:256550 Sialidosis, type II germline 6 31862690 TCTGGGCTTCTGGGGAGGCTGTAGGGTTTGGGTGTTTGCCGCGATCTTCCTGCTGCTGTCT 727503329 175223 NM_000260.3(MYO7A):c.3892G>A (p.Gly1298Arg) MYO7A Apr 20, 2017 MedGen:C1568247,OMIM:276900,Orphanet:ORPHA231169 Usher syndrome, type 1 germline 11 77190838 GCCGACAAGATCTCTCTCAAGGACCGGTTCGGGTTCTCCCTCTACATTGCCCTGTTTGACA 397514261 75337 NM_005546.3(ITK):c.86G>A (p.Arg29His) ITK May 01, 2012 MedGen:C3552634,OMIM:613011 Lymphoproliferative syndrome 1 germline 5 157181063 GAAGAACTTCTCCCTCGAACTTTAAAGTCCGCTTCTTTGTGTTAACCAAAGCCAGCCTGGC 75096551 33858 NM_000492.3(CFTR):c.2988+1G>A CFTR Apr 15, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008;MedGen:C0238339,OMIM:167800,Orphanet:ORPHA676,SNOMED CT:68072000;MedGen:CN169374 Cystic fibrosis;Hereditary pancreatitis;not specified germline;unknown 7 117606754 CTGCCTCTTACCATATTTGACTTCATCCAGGTATGTAAAAATAAGTACCGTTAAGTATGTC 80359816 31150 NM_006516.2(SLC2A1):c.377G>A (p.Arg126His) SLC2A1 Dec 05, 2016 MedGen:C3553859,OMIM:614847;MedGen:CN030711,OMIM:606777;MedGen:CN517202 Epilepsy, idiopathic generalized, susceptibility to, 12;GLUT1 deficiency syndrome 1;not provided germline 1 42930765 GCAAGTCCTTTGAGATGCTGATCCTGGGCCGCTTCATCATCGGTGTGTACTGCGGCCTGAC -1 424265 NM_018136.4(ASPM):c.2085G>A (p.Trp695Ter) ASPM Mar 29, 2017 MedGen:C1837501,OMIM:608716 Primary autosomal recessive microcephaly 5 biparental 1 197135184 TGCAAAAAACATGTTTTATGATGAACGCTGGAAGGAAAAGCAGGAACAGGGCTTCACTTGG 730880639 179331 NM_000256.3(MYBPC3):c.1223+1G>A MYBPC3 Jul 12, 2017 Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569;MedGen:CN517202 Hypertrophic cardiomyopathy;not provided germline 11 47343491 GAATGGCCAGGAGATCCAGATGAGCGGCAGGTGCAGCCTGGGGTGGGGAGGGGGGCTCGGG 397517974 57538 NM_206933.2(USH2A):c.1143+1G>A USH2A Feb 16, 2011 MedGen:C1848634,OMIM:276901 Usher syndrome, type 2A germline 1 216325304 TCAGTTGATTTGGAAAATGGACAGTATCAGGTAATGAGAAACGATAAGGTGTACATTAATT 377767354 36180 NM_005359.5(SMAD4):c.1139+1G>A SMAD4 Dec 04, 2012 MedGen:C0345893,OMIM:174900,Orphanet:ORPHA329971,SNOMED CT:9273005 Juvenile polyposis syndrome not provided 18 51065607 CCACAGGACAGAAGCCATTGAGAGAGCAAGGTATTGATTGTATAGTCAGATAGTTACTTTA 1057519337 362080 NM_015365.2(AMMECR1):c.530G>A (p.Gly177Asp) AMMECR1 May 17, 2017 MedGen:C4310810,OMIM:300990 Midface hypoplasia, hearing impairment, elliptocytosis, and nephrocalcinosis germline X 110264543 GTCGAGACAAAAGATTACGTGGATGCATAGGTACTTTTTCTGCCATGAATTTGCATTCAGG -1 432139 NM_000444.5(PHEX):c.732+5G>A PHEX Oct 31, 2013 MedGen:C0733682,OMIM:307800,Orphanet:ORPHA89936,SNOMED CT:82236004 Familial X-linked hypophosphatemic vitamin D refractory rickets germline X 22090502 TTGATAACAGTACAGAAGCCAAGTCTGTAAGTTTTACTCATATTCAACTATGTGCCTTACC 587784017 168488 NM_133433.3(NIPBL):c.6590G>A (p.Gly2197Glu) NIPBL Feb 08, 2013 MedGen:CN029798,OMIM:122470 Cornelia de Lange syndrome 1 germline 5 37048502 ATATGATGAGATTTTTCCCCTCTCCCATAGGATTTGCCTTTATTCAGCATCCAAGTCTAAT 28928878 30888 NM_000558.3(HBA1):c.179G>A (p.Gly60Asp) HBA1 Jul 20, 2016 na;MedGen:CN077787 HEMOGLOBIN ADANA;Hemoglobin H disease, nondeletional germline 16 177012 GCCACGGCTCTGCCCAGGTTAAGGGCCACGGCAAGAAGGTGGCCGACGCGCTGACCAACGC 879254683 245800 NM_000527.4(LDLR):c.809G>A (p.Cys270Tyr) LDLR Mar 25, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11106679 ACTGCAAGGACATGAGCGATGAAGTTGGCTGCGTTAATGGTGAGCGCTGGCCATCTGGTTT -1 444136 NM_000162.4(GCK):c.580-1G>A GCK Sep 05, 2017 MedGen:CN517202 not provided germline 7 44149860 CCAGCACTGCAGCTTCTGTGCTTCTTGGCAGGACTTTGAAATGGATGTGGTGGCAATGGTG 104894318 18841 NM_000372.4(TYR):c.1342G>A (p.Asp448Asn) TYR Jul 15, 1992 MedGen:C0268494,OMIM:203100,Orphanet:ORPHA79431,SNOMED CT:6483008;MedGen:CN517202 Tyrosinase-negative oculocutaneous albinism;not provided germline 11 89284930 TTCTTTATTTCATCCAAAGATCTGGGCTATGACTATAGCTATCTACAAGATTCAGGTAAAG 104893740 30965 NM_144499.2(GNAT1):c.113G>A (p.Gly38Asp) GNAT1 Jul 01, 1996 MedGen:C1864870,OMIM:610444 Congenital stationary night blindness, autosomal dominant 3 germline 3 50193139 TCTGAGGCGCCGCGTCTCTTTCAGGTGCCGGTGAGTCCGGGAAGAGCACCATCGTCAAGCA 397518484 94345 NM_001142617.1(STRA6):c.1521-1G>A STRA6 Mar 01, 2013 MedGen:C1832661,OMIM:601186,Orphanet:ORPHA2470 Microphthalmia syndromic 9 germline 15 74181459 GGCCTGCCTCAGCTTTCTTCTCCCATCCTAGGCGAGTGCTCTATGCAGCCACCTTTCTTCT 74503330 22256 NM_000492.3(CFTR):c.3752G>A (p.Ser1251Asn) CFTR Apr 04, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008;MedGen:CN236562;MedGen:CN517202 Cystic fibrosis;ivacaftor response - Efficacy;not provided germline 7 117642472 GCCTCTTGGGAAGAACTGGATCAGGGAAGAGTACTTTGTTATCAGCTTTTTTGAGACTACT 775011495 481389 NM_181789.3(GLDN):c.1305G>A (p.Trp435Ter) GLDN Dec 09, 2017 MedGen:C4310670,OMIM:617194 Lethal congenital contracture syndrome 11 germline 15 51404403 CAATCTAGCTGTAGATGAAAAGGGCCTTTGGATTATCTATGCGTCAAGTGTGGACGGCTCG 113993965 47572 NM_003722.4(TP63):c.518G>A (p.Gly173Asp) TP63 Aug 06, 2015 MedGen:C1863204,OMIM:103285,Orphanet:ORPHA978 ADULT syndrome germline 3 189808465 CCGCCATCCCCTCCAACACCGACTACCCAGGCCCGCACAGTTTCGACGTGTCCTTCCAGCA 81002873 67120 NM_000059.3(BRCA2):c.7976+1G>A BRCA2 Dec 28, 2016 MedGen:C2675520,OMIM:612555;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Breast-ovarian cancer, familial 2;Hereditary cancer-predisposing syndrome;not provided germline;somatic 13 32362694 AGAAAGGGTGCTTCTTCAACTAAAATACAGGCAAGTTTAAAGCATTACATTACGTAATCAT 398123116 98251 NM_000038.5(APC):c.1659G>A (p.Trp553Ter) APC Feb 21, 2013 MedGen:C2713442,OMIM:175100 Familial adenomatous polyposis 1 germline 5 112828888 TATTGCGAGTGTTTTGAGGAATTTGTCTTGGCGAGCAGATGTAAATAGTAAAAAGACGTTG 267607200 17481 NM_001173464.1(KIF21A):c.2841G>A (p.Met947Ile) KIF21A Jul 01, 2004 MedGen:C2751105 Fibrosis of extraocular muscles, congenital, 3b germline 12 39332606 GATGACCATTTCCAACATGGAGGCAGATATGAATAGACTCCTCAAGGTGTGGAAAATAGAG 72658161 194095 NM_000089.3(COL1A2):c.2099G>A (p.Gly700Asp) COL1A2 Oct 02, 2014 MedGen:C0268362,OMIM:259420,Orphanet:ORPHA216812,SNOMED CT:385483009;MedGen:C0268363,OMIM:166220,Orphanet:ORPHA216820,SNOMED CT:205497004 Osteogenesis imperfecta type III;Osteogenesis imperfecta with normal sclerae, dominant form germline 7 94420252 TCCCATTATAGGGCGAAGCTGGGGCTGCTGGTCCTGCTGGTCCTGCTGGTCCTCGGGGAAG 104886210 35932 NM_000495.4(COL4A5):c.3088G>A (p.Gly1030Ser) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108625776 ATAGGACCTCCTGGACTTAAAGGAACCATCGGTGATATGGGTTTTCCAGGTGAGTGATGAA 28935479 26238 NM_139058.2(ARX):c.856G>A (p.Gly286Ser) ARX Mar 31, 2017 MedGen:C0796244,OMIM:300419;MedGen:CN517202 Mental retardation, with or without seizures, ARX-related, X-linked;not provided germline X 25013139 GCAGCAGCTGCCGCTGCAGTGGCCACAGAGGGCGGGGAGCTGTCACCCAAGGAGGAGCTGC 906553840 413953 NM_000089.3(COL1A2):c.874G>A (p.Gly292Ser) COL1A2 Jul 31, 2017 MedGen:C0268335,OMIM:130000,Orphanet:ORPHA287,SNOMED CT:20766005,SNOMED CT:83470009;MedGen:C0023931,OMIM:166200,SNOMED CT:385482004;MedGen:C0268363,OMIM:166220,Orphanet:ORPHA216820,SNOMED CT:205497004 Ehlers-Danlos syndrome, classic type;Osteogenesis imperfecta type I;Osteogenesis imperfecta with normal sclerae, dominant form germline;maternal 7 94409403 CGTGGTGAAGTGGGTCTTCCAGGCCTCTCCGGCCCCGTTGGACCTCCTGTAAGTAGCCACT 267606749 32207 NM_001849.3(COL6A2):c.1493G>A (p.Arg498His) COL6A2 Jul 07, 2009 MedGen:CN033863,OMIM:254090 Ullrich congenital muscular dystrophy 1 germline 21 46121590 CTCGGGGAGACCCCGGTGATGCAGGACCCCGTGGAGACTCAGGACAGCCAGGCCCCAAGGT 797044569 188189 NM_002055.4(GFAP):c.197G>A (p.Arg66Gln) GFAP Jan 08, 2015 MedGen:C0270726,OMIM:203450,Orphanet:ORPHA58,SNOMED CT:81854007 Alexander's disease germline 17 44915290 GGGCACTCAATGCTGGCTTCAAGGAGACCCGGGCCAGTGAGCGGGCAGAGATGATGGAGCT 587776434 165630 NC_012920.1:m.3890G>A MT-ND1 Apr 17, 2014 MedGen:C0023264,OMIM:256000,Orphanet:ORPHA506,SNOMED CT:29570005 Leigh syndrome germline MT 3890 GATTTATCTCCACACTAGCAGAGACCAACCGAACCCCCTTCGACCTTGCCGAAGGGGAGTC 137852409 25240 NM_000132.3(F8):c.986G>A (p.Cys329Tyr) F8 Jan 01, 1995 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154969354 TGATGGACCTTGGACAGTTTCTACTGTTTTGTCATATCTCTTCCCACCAACATGGTAATAT 1057520577 372850 NM_170665.3(ATP2A2):c.1185-1G>A ATP2A2 Apr 08, 2015 MedGen:CN517202 not provided germline 12 110333180 CCTGCTCTAAGAGTGTTTTCTCTTTGGGCAGGCATAAAGATGATAAACCAGTGAATTGTCA 137853132 20783 NM_005094.3(SLC27A4):c.274G>A (p.Ala92Thr) SLC27A4 Aug 01, 2009 MedGen:C1837610,OMIM:608649,Orphanet:ORPHA88621 Ichthyosis prematurity syndrome germline 9 128345267 TCTACCGTTCGGCGCCACCCCGACAAGACGGCCCTGATCTTCGAGGGCACAGATACCCACT 369858688 362087 NM_015692.3(CPAMD8):c.4549-1G>A CPAMD8 Jan 27, 2017 MedGen:C4310622,OMIM:617319 Anterior segment dysgenesis 8 germline 19 16903624 AGCAGGGCCTCACGGTGACTTCTGTCTCCAGATCCCCAGCCTCCCCACGGGGCTGTTTGTG 879255563 33401 NM_000080.3(CHRNE):c.501-16G>A CHRNE Aug 09, 2005 MedGen:C1837091,OMIM:608931 Myasthenic syndrome, congenital, associated with acetylcholine receptor deficiency germline 17 4901641 CCCAGGTCAGAGCTTCTGGGGTGGGCTCCCGGCCCTGGCTCCGCAGCTCTCAGACGTACAA 62644503 108560 NM_000277.2(PAH):c.755G>A (p.Arg252Gln) PAH Dec 21, 2016 MedGen:C0031485,OMIM:261600,Orphanet:ORPHA716,SNOMED CT:154735006;MedGen:CN517202 Phenylketonuria;not provided germline 12 102852902 TCCGACCTGTGGCTGGCCTGCTTTCCTCTCGGGATTTCTTGGGTGGCCTGGCCTTCCGAGT 121912912 415116 NM_000089.3(COL1A2):c.1136G>A (p.Gly379Glu) COL1A2 Mar 28, 2017 MedGen:CN517202 not provided germline 7 94410466 AAGGTCCTCCTGGTCCCAGTGGTGAAGAAGGAAAGAGAGGCCCTAATGGGGAAGCTGGATC 797044877 205340 NM_000292.2(PHKA2):c.884G>A (p.Arg295His) PHKA2 - MeSH:D030342,MedGen:C0950123 Inborn genetic diseases germline X 18940029 TCTCTTATTAGGGGCGTTATGGATGCTGTCGCTTCCTTCGAGATGGTTATAAAACTCCAAG 28931589 32623 NM_001904.3(CTNNB1):c.101G>A (p.Gly34Glu) CTNNB1 May 31, 2016 Human Phenotype Ontology:HP:0030078,MeSH:C538231,MedGen:C0152013;MedGen:C0278701;Human Phenotype Ontology:HP:0006744,MeSH:D018268,MedGen:C0206686,Orphanet:ORPHA1501;MedGen:C2239176,OMIM:114550,Orphanet:ORPHA88673,SNOMED CT:187769009,SNOMED CT:25370001;MeSH:C562393,MedGen:C0151779,SNOMED CT:93655004;MedGen:C0153574,Orphanet:ORPHA213569;Human Phenotype Ontology:HP:0002885,MeSH:D008527,MedGen:C0025149,OMIM:155255,Orphanet:ORPHA616;MeSH:D010051,MedGen:CN236629;Human Phenotype Ontology:HP:0030434,MeSH:D018296,MedGen:C0206711,OMIM:132600,Orphanet:ORPHA91414;MeSH:C535575,MedGen:C1168401,OMIM:275355,Orphanet:ORPHA67037 Adenocarcinoma of lung;Adenocarcinoma of stomach;Adrenocortical carcinoma;Hepatocellular carcinoma;Malignant melanoma of skin;Malignant neoplasm of body of uterus;Medulloblastoma;Ovarian Neoplasms;Pilomatrixoma;Squamous cell carcinoma of the head and neck somatic 3 41224613 ACTGGCAGCAACAGTCTTACCTGGACTCTGGAATCCATTCTGGTGCCACTACCACAGCTCC -1 486714 NM_015506.2(MMACHC):c.81G>A (p.Gln27=) MMACHC Mar 06, 2018 MedGen:CN847584 METHYLMALONIC ACIDURIA AND HOMOCYSTINURIA, cblC TYPE, DIGENIC germline 1 45500413 TCCTTTTGGCTTCGAGGTTTACCCCTTCCAGGTTAGTTTATCCCTCCTGCTGTTCTAGGGC 121909307 23564 NM_000178.3(GSS):c.491G>A (p.Arg164Gln) GSS Nov 23, 2016 Human Phenotype Ontology:HP:0003343,MedGen:C0398746,OMIM:266130,Orphanet:ORPHA289846,SNOMED CT:234589002 Gluthathione synthetase deficiency germline 20 34942488 GCCTGGCCTCCCGGACCCCAGCTGTGCACCGGTGGGTCCCCTGGGCAGCCCCCGGCATACC 74315403 28438 NM_000311.4(PRNP):c.532G>A (p.Asp178Asn) PRNP Jan 05, 2010 MedGen:C0206042,OMIM:600072,Orphanet:ORPHA466,SNOMED CT:83157008;MedGen:C0206042,OMIM:600072,Orphanet:ORPHA466,SNOMED CT:83157008;MedGen:C0162534,Orphanet:ORPHA56970;MedGen:C0022336,OMIM:123400,Orphanet:ORPHA204,SNOMED CT:792004 Fatal familial insomnia;Fatal familial insomnia;Genetic prion diseases;Jakob-Creutzfeldt disease germline 20 4699752 GAGTACAGCAACCAGAACAACTTTGTGCACGACTGCGTCAATATCACAATCAAGCAGCACA 397507543 49025 NM_002834.4(PTPN11):c.1502G>A (p.Arg501Lys) PTPN11 Dec 25, 2016 MeSH:D009634,MedGen:C0028326,Orphanet:ORPHA648,SNOMED CT:205824006;MedGen:CN166718,Orphanet:ORPHA98733;MedGen:CN517202 Noonan syndrome;Rasopathy;not provided germline 12 112489078 CCAAAACCATCCAGATGGTGCGGTCTCAGAGGTCAGGGATGGTCCAGACAGAAGCACAGTA 756928158 192187 NM_000166.5(GJB1):c.271G>A (p.Val91Met) GJB1 Jun 26, 2017 MedGen:CN118851;MedGen:C0393808,OMIM:302800,Orphanet:ORPHA101075,SNOMED CT:230552007 Charcot-Marie-Tooth Neuropathy X;X-linked hereditary motor and sensory neuropathy germline X 71223978 CTCATCCTAGTTTCCACCCCAGCTCTCCTCGTGGCCATGCACGTGGCTCACCAGCAACACA 760363252 21116 NM_004260.3(RECQL4):c.1704+1G>A RECQL4 Jun 01, 2010 MedGen:C0032339,OMIM:268400,Orphanet:ORPHA2909,SNOMED CT:69093006 Rothmund-Thomson syndrome germline 8 144514441 AGGAAGCAACGGGAATCTGTCCTGCAGAAGGTGGGGGCCTCATGGGCCTAGGGGTGAGGGA 997026784 434872 NM_024417.4(FDXR):c.1429G>A (p.Glu477Lys) FDXR Oct 12, 2017 MedGen:CN533577,OMIM:617717 AUDITORY NEUROPATHY AND OPTIC ATROPHY germline 17 74862864 GCCCGGGGCCAGGGCACGGGGAAGCCCAGGGAGAAGCTGGTGGATCCTCAGGAGATGCTGC 1057519079 359110 NM_014339.6(IL17RA):c.1159G>A (p.Asp387Asn) IL17RA Dec 19, 2016 MedGen:C3151402,OMIM:613953 Immunodeficiency 51 germline 22 17108378 CCCAGGAAGGTCTGGATCATCTACTCAGCCGACCACCCCCTCTACGTGGACGTGGTCCTGA 58073789 426964 NM_001171.5(ABCC6):c.2171G>A (p.Arg724Lys) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16182488 GGCAGGAGCTGGACCCACCCTGGCTGGAGAGAGTACTAGAAGCCTGTGCCCTGCAGCCAGA 768835732 389251 NM_144612.6(LOXHD1):c.4843G>A (p.Gly1615Arg) LOXHD1 Jun 04, 2016 MedGen:C2746083,OMIM:613079 Deafness, autosomal recessive 77 germline 18 46524499 ATGGCCGATGTCGACATCAGCACAGTGACCGGGCCCATGGCTGACTACGTTCAAGAGGGCC 121434553 32188 NM_004369.3(COL6A3):c.5036G>A (p.Gly1679Glu) COL6A3 Sep 23, 2016 MedGen:CN029274,OMIM:158810 Bethlem myopathy 1 germline 2 237367151 TTTATGAAGATGGCGACTCCATCCAAGTGGGGCTTGTCCAGTACAACTCTGACCCCACTGA 587779565 107022 NM_000090.3(COL3A1):c.4254G>A (p.Thr1418=) COL3A1 Aug 02, 2017 MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000;MedGen:CN517202 Ehlers-Danlos syndrome, type 4;not provided germline 2 189010890 CACCTACACAGTTCTGGAGGATGGTTGCACGGTAGGAAACATTTTTCTCAATATAGGTCAT 79681911 33146 NM_000331.5(SAA1):c.269G>A (p.Gly90Asp) SAA1 Mar 01, 1992 na Serum amyloid a variant germline 11 18269755 GAGAGAATATCCAGAGATTCTTTGGCCATGGTGCGGAGGACTCGCTGGCTGATCAGGCTGC 587779662 107153 NM_000090.3(COL3A1):c.2753G>A (p.Gly918Glu) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189004073 CGGGTAACACTGGTGCTCCTGGCAGCCCTGGAGTGTCTGGACCAAAAGGTGATGCTGGCCA 267606848 31113 NM_001146040.1(GLRA1):c.884G>A (p.Ser295Asn) GLRA1 Feb 01, 2008 MedGen:C1835614,OMIM:149400,Orphanet:ORPHA3197 Hyperekplexia hereditary germline 5 151851418 TCACCACTGTGCTCACCATGACCACCCAGAGCTCCGGCTCTCGAGCATCTCTGCCCAAGGT 398123281 98602 NM_000263.3(NAGLU):c.503G>A (p.Trp168Ter) NAGLU Aug 09, 2012 MedGen:CN517202 not provided germline 17 42537517 CGCTGAATGGCATCAACCTGGCACTGGCCTGGAGCGGCCAGGAGGCCATCTGGCAGCGGGT 760225886 228312 NM_206933.2(USH2A):c.9570+1G>A USH2A Apr 17, 2015 MedGen:C1848634,OMIM:276901 Usher syndrome, type 2A germline 1 215816996 GGACACATTTGCTATTCTTCTGAAGCTAAGGTAAGTCTTTTCTAACTAATCAGTGAACCAT -1 424465 NM_172079.2(CAMK2B):c.820-1G>A CAMK2B Jul 03, 2017 Human Phenotype Ontology:HP:0001249,MedGen:C1843367 Intellectual disability de novo 7 44241784 GGCTGCCATATGACCACCCATTTCCCCACAGCAACGCTCCACGGTAGCATCCATGATGCAC 587783589 169852 NM_178151.2(DCX):c.809-1G>A DCX Feb 08, 2013 Human Phenotype Ontology:HP:0002282,MedGen:C0008519 Heterotopia germline X 111331042 CTACTAAGCTGTCTGTGTCCTTTTGCCCCAGAATGCCGAGTCATGAAGGGAAACCCATCAG 118203984 16398 NM_001080.3(ALDH5A1):c.1226G>A (p.Gly409Asp) ALDH5A1 Aug 27, 2014 MedGen:C0268631,OMIM:271980,Orphanet:ORPHA22,SNOMED CT:49748000 Succinate-semialdehyde dehydrogenase deficiency germline 6 24528049 CCGTTTCTAAAGGTGCCACCGTTGTGACAGGTGGAAAACGACACCAACTTGGAAAAAATTT 267606750 32198 NM_001849.3(COL6A2):c.1861G>A (p.Asp621Asn) COL6A2 Jan 07, 2016 MedGen:CN029274,OMIM:158810 Bethlem myopathy 1 germline 21 46125509 TGTGGCGCCCTGGACGTGGTCTTCGTCATCGACAGCTCCGAGAGCATTGGGTACACCAACT 104893936 22064 NM_001001502.2(SNCB):c.208G>A (p.Val70Met) SNCB Sep 14, 2004 MedGen:C0752347,OMIM:127750 Lewy body dementia germline 5 176626472 AAGGAACAGGCCTCACATCTGGGAGGAGCTGTGTTCTCTGGGGCAGGGAACATCGCAGCAG 121909669 31262 NM_004960.3(FUS):c.1553G>A (p.Arg518Lys) FUS Feb 27, 2009 MedGen:C1842675,OMIM:608030 Amyotrophic lateral sclerosis type 6 germline 16 31191410 TTTTTTTTTTTTTTTGCAGGGGTGAGCACAGACAGGATCGCAGGGAGAGGCCGTATTAATT 794727121 191529 NM_001848.2(COL6A1):c.1013G>A (p.Gly338Glu) COL6A1 Mar 23, 2016 MedGen:CN029274,OMIM:158810;MedGen:CN033863,OMIM:254090 Bethlem myopathy 1;Ullrich congenital muscular dystrophy 1 germline 21 45990783 AGTTTTCTTCCTCTTTCCAGGGGGAGATGGGGTACCCAGGCCTGCCAGGCTGCAAGGGCTC 121909129 22648 NM_001320198.1(KRT86):c.1237G>A (p.Glu413Lys) KRT86 Jan 01, 2004 MedGen:C0546966,OMIM:158000,Orphanet:ORPHA573,SNOMED CT:69488000;MedGen:CN517202 Beaded hair;not provided germline 12 52306270 ATCGCCACCTACAGGCGCCTGCTGGAGGGCGAGGAGCAGAGGTGGGTCCCATAGACCTTTC 869312881 226594 NM_000364.3(TNNT2):c.316G>A (p.Glu106Lys) TNNT2 Jun 01, 2010 MedGen:C1832243,OMIM:601494 Left ventricular noncompaction 6 germline 1 201365286 CACCCACAGGACATCCACCGGAAGCGCATGGAGAAGGACCTGAATGAGTTGCAGGCGCTGA 75527207 22159 NM_000492.3(CFTR):c.1652G>A (p.Gly551Asp) CFTR Jun 07, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008;MedGen:C0238339,OMIM:167800,Orphanet:ORPHA676,SNOMED CT:68072000;MedGen:CN236562;MedGen:CN517202;MedGen:CN169374 Cystic fibrosis;Hereditary pancreatitis;ivacaftor response - Efficacy;not provided;not specified germline;maternal;unknown 7 117587806 TTGGAGAAGGTGGAATCACACTGAGTGGAGGTCAACGAGCAAGAATTTCTTTAGCAAGGTG 1131691564 422461 NM_000475.4(NR0B1):c.708G>A (p.Trp236Ter) NR0B1 Sep 16, 2015 MedGen:C0342482,OMIM:300200,SNOMED CT:237764004;MedGen:CN517202 Congenital adrenal hypoplasia, X-linked;not provided germline X 30308656 TCCGGAGGAGCGGCCGAGGGCCCCCTGGTGGGACACCTCCTCTGGTGCGCTGCGGCCGGTG 28940278 17777 NM_004183.3(BEST1):c.140G>A (p.Arg47His) BEST1 Apr 01, 2000 MedGen:C0339510,OMIM:153700,Orphanet:ORPHA1243,SNOMED CT:90036004;MedGen:CN517202 Vitelliform macular dystrophy type 2;not provided germline 11 61951946 TAATCTTCCTGCTCTGCTACTACATCATCCGCTTTATTTATAGGTAAAGCTGGCAGGGCTG 879255051 246375 NM_000527.4(LDLR):c.1846-1G>A LDLR Mar 30, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline;unknown 19 11120091 GGATTTGTCATCTTCCTTGCTGCCTGTTTAGGACAAAGTATTTTGGACAGATATCATCAAC 121907892 18551 NM_144585.3(SLC22A12):c.774G>A (p.Trp258Ter) SLC22A12 Jun 14, 2016 MedGen:C0473219,OMIM:220150,SNOMED CT:236478009 Familial renal hypouricemia germline 11 64593747 AGCTGCAGTGGCCTACGGTGTGCGGGACTGGACACTGCTGCAGCTGGTGGTCTCGGTCCCC 797045586 207083 NM_032682.5(FOXP1):c.1541G>A (p.Arg514His) FOXP1 Apr 21, 2017 MedGen:C3150923,OMIM:613670;MedGen:CN517202 Mental retardation with language impairment and with or without autistic features;not provided de novo;germline;not applicable 3 70972666 CTCTTTTATACTTGCTGCAGAATGCAGTGCGTCATAATCTTAGTCTTCACAAGTGTTTTGT -1 446193 NM_175614.4(NDUFA11):c.97+5G>A NDUFA11 Mar 21, 2016 MedGen:CN517202 not provided germline 19 5903607 CACCACCAGTATTGCCAGCGTCGCTGGTGAGCGCCGGCCGGGCCCCGAGGGTGGAGGGCCG 587783766 170037 NM_000252.2(MTM1):c.1244G>A (p.Gly415Glu) MTM1 Feb 08, 2013 MedGen:C0410203,OMIM:310400,Orphanet:ORPHA596,SNOMED CT:46804001 Severe X-linked myotubular myopathy germline X 150658011 TACTGGTACAAAAAGAATGGATAAGTTTTGGACATAAATTTGCATCTGTGAGTAAACAAAG 863224472 213497 NM_000166.5(GJB1):c.9G>A (p.Trp3Ter) GJB1 May 05, 2015 MedGen:CN118851 Charcot-Marie-Tooth Neuropathy X germline X 71223716 TTGCAGGTGTGAATGAGGCAGGATGAACTGGACAGGTTTGTACACCTTGCTCAGTGGCGTG 879255626 247495 NM_007118.3(TRIO):c.4283G>A (p.Arg1428Gln) TRIO Mar 27, 2017 MedGen:C4310740,OMIM:617061,Orphanet:ORPHA476126 Mental retardation, autosomal dominant 44 germline 5 14394102 TTTCTTCCTACCTTATTAAACCAGTTCAGCGAATAACGAAGTATCAGCTCCTTTTAAAAGT 1085307362 414317 NM_001204.6(BMPR2):c.1487G>A (p.Cys496Tyr) BMPR2 Aug 12, 2016 MedGen:C0152171,OMIM:178600,SNOMED CT:26174007;MedGen:CN169374 Primary pulmonary hypertension;not specified germline 2 202552789 AGGATGCAGAGGCTCGGCTTACTGCACAGTGTGCTGAGGAAAGGATGGCTGAACTTATGAT 869320661 227128 NM_152296.4(ATP1A3):c.946G>A (p.Gly316Ser) ATP1A3 Apr 07, 2017 MedGen:C1868681,OMIM:128235,Orphanet:ORPHA71517 Dystonia 12 germline 19 41984965 ACCTGGCTTGAGGCTGTCATCTTCCTCATCGGCATCATCGTGGCCAATGTCCCAGAGGGTC -1 448826 NM_001165963.2(SCN1A):c.4339-1G>A SCN1A Apr 17, 2017 MedGen:C0393706,Orphanet:ORPHA1934 Early infantile epileptic encephalopathy germline 2 165998176 TAATATTTTACAAAATATTCCCCTTTGGTAGGTGGAACTCCAGCCTAAGTATGAAGAAAGT 750247691 419005 NM_025139.5(ARMC9):c.205G>A (p.Gly69Arg) ARMC9 Aug 16, 2017 MedGen:CN262509;MedGen:CN399089,OMIM:617622 ARMC9-related Joubert syndrome;JOUBERT SYNDROME 30 germline;paternal 2 231214858 CAGAAGGATCTTGTCGCTGCATTTGACAACGGAGACCAGAAGGTGTTCTTCGATCTGTGGG 397514718 75081 NM_080605.3(B3GALT6):c.466G>A (p.Asp156Asn) B3GALT6 Jun 06, 2013 MedGen:C0432243,OMIM:271640,Orphanet:ORPHA93359,SNOMED CT:254100000 Spondyloepimetaphyseal dysplasia with joint laxity germline 1 1232744 CACGTGGCCTTCGAGTTCGTGCTCAAGGCGGACGACGACTCCTTCGCGCGGCTGGACGCGC 760376992 426846 NM_001171.5(ABCC6):c.3787G>A (p.Gly1263Arg) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16157758 TGTGCAGCTCAGCCCCCCTGGCCTCAGGGCGGGCAGATCGAGTTCCGGGACTTTGGGCTAA 142439525 59859 NM_030964.3(SPRY4):c.910G>A (p.Val304Ile) SPRY4 May 02, 2013 MedGen:C3808971,OMIM:615266 Hypogonadotropic hypogonadism 17 with or without anosmia germline 5 142314268 CCTGGTTGCCGCTGCAAGCACACGAACAGCGTCATCTGCAAAGCAGCCAGCGGGGATGCCA 80338727 34364 NM_014251.2(SLC25A13):c.1801G>A (p.Glu601Lys) SLC25A13 Jan 05, 2012 MedGen:C1853942,OMIM:605814,Orphanet:ORPHA247598 Neonatal intrahepatic cholestasis caused by citrin deficiency not provided 7 96121695 CCCCAGTTTGGTGTAACTTTGCTGACTTACGAATTGCTACAGCGATGGTTCTACATTGATT 398124096 100745 NM_004006.2(DMD):c.9564-1G>A DMD Jun 19, 2013 MedGen:C0917713,OMIM:300376,Orphanet:ORPHA98895,SNOMED CT:387732009;MedGen:C3668940,OMIM:302045;MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Becker muscular dystrophy;Dilated cardiomyopathy 3B;Duchenne muscular dystrophy germline X 31206668 AATTGTTTTCTGCTTTGATTCTTCATAATAGGGGACGAACAGGGAGGATCCGTGTCCTGTC 397514737 75270 NM_000816.3(GABRG2):c.968G>A (p.Arg323Gln) GABRG2 Dec 01, 2016 MedGen:C1858674;MedGen:CN517202 Generalized epilepsy with febrile seizures plus 3;not provided germline 5 162149153 TGACAATGACCACCCTCAGCACCATTGCCCGGAAATCGCTCCCCAAGGTCTCCTATGTCAC 774323189 186967 NM_000049.2(ASPA):c.859G>A (p.Ala287Thr) ASPA Aug 04, 2016 MedGen:C0751663;MedGen:C0206307,OMIM:271900,Orphanet:ORPHA141,SNOMED CT:80544005 Canavan Disease, Familial Form;Spongy degeneration of central nervous system germline;unknown 17 3499005 ACCGTGTACCCCGTGTTTGTGAATGAGGCCGCATATTACGAAAAGAAAGAAGCTTTTGCAA 193302868 47612 NM_016938.4(EFEMP2):c.1189G>A (p.Ala397Thr) EFEMP2 May 12, 2011 MedGen:C3280798,OMIM:614437;MedGen:CN033664,OMIM:219100 Autosomal recessive cutis laxa type 1B;Autosomal recessive cutis laxa type IA germline 11 65867061 ACTGCCCTGCAGCAAATCAACAACGTCAGCGCCATGCTGGTCCTCGCCCGGCCGGTGACGG 118204096 16486 NM_000190.3(HMBS):c.518G>A (p.Arg173Gln) HMBS Jan 01, 1992 MedGen:C0162565,OMIM:176000,Orphanet:ORPHA79276,SNOMED CT:234422006 Acute intermittent porphyria germline 11 119091432 ACTCTCCACAGCGGGGAAACCTCAACACCCGGCTTCGGAAGCTGGACGAGCAGCAGGAGTT 587783463 169261 NM_004380.2(CREBBP):c.1257G>A (p.Trp419Ter) CREBBP Feb 08, 2013 MedGen:C0035934,OMIM:180849,Orphanet:ORPHA353277,SNOMED CT:45582004 Rubinstein-Taybi syndrome germline 16 3792054 TGCATCTTCACGACAAATCATCTCTCATTGGAAGAACTGCACACGACATGACTGTCCTGTT 148660051 195093 NM_206933.2(USH2A):c.10073G>A (p.Cys3358Tyr) USH2A May 18, 2017 Human Phenotype Ontology:HP:0000547,MeSH:D012174,MedGen:C0035334,OMIM:268000,Orphanet:ORPHA791,SNOMED CT:28835009;MedGen:C3151138,OMIM:613809;MedGen:C3151138,OMIM:613809;MedGen:C1848634,OMIM:276901;MedGen:C1848634,OMIM:276901;MedGen:CN517202 Retinitis pigmentosa;Retinitis pigmentosa 39;Retinitis pigmentosa 39;Usher syndrome, type 2A;Usher syndrome, type 2A;not provided germline;paternal;unknown 1 215790168 TTAAAAAGAATGACCCGGTGCCAGTAAAATGCTGTGAGACTGAACTTATTCCAAAGAGCCA 121909209 22906 NM_000358.2(TGFBI):c.1664G>A (p.Arg555Gln) TGFBI Jan 01, 2012 Gene:982,MedGen:C1562894,OMIM:602082,Orphanet:ORPHA98960,SNOMED CT:417065002 Thiel-Behnke corneal dystrophy germline 5 136056781 AAGCCTTCCGAGCCCTGCCACCAAGAGAACGGAGCAGACTCTTGGGTAAAGACCAACTTAA 9940825 427028 NM_001171.5(ABCC6):c.1245G>A (p.Val415=) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16198114 GGTGGGTGATGTGGTCAATCTGGTGTCCGTGGACGTGCAGCGGCTGACCGAGAGCGTCCTC 28941778 18529 NM_024426.4(WT1):c.1390G>A (p.Asp464Asn) WT1 Jan 28, 2013 MedGen:C0268747,OMIM:256370,SNOMED CT:111406002,SNOMED CT:236383002;MedGen:C0950121,OMIM:194080,Orphanet:ORPHA220,SNOMED CT:236385009 Diffuse mesangial sclerosis;Drash syndrome germline 11 32392014 AAAACTTGTCAGCGAAAGTTCTCCCGGTCCGACCACCTGAAGACCCACACCAGGACTCATA 672601317 171722 NM_000492.3(CFTR):c.830G>A (p.Trp277Ter) CFTR Oct 01, 2013 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis unknown 7 117536634 AAAATATCCAATCTGTTAAGGCATACTGCTGGGAAGAAGCAATGGAAAAAATGATTGAAAA 3218713 29127 NM_000257.3(MYH7):c.746G>A (p.Arg249Gln) MYH7 Aug 01, 2017 MedGen:C3495498,OMIM:192600;Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Familial hypertrophic cardiomyopathy 1;Hypertrophic cardiomyopathy;Primary familial hypertrophic cardiomyopathy;not provided germline 14 23431468 CTCTTCCATCTCTCCAGGGGAAATTCATTCGAATTCATTTTGGGGCAACAGGAAAGTTGGC 879254433 245413 NM_000527.4(LDLR):c.191-1G>A LDLR Mar 30, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000;MedGen:CN118841 Familial hypercholesterolemia;Familial hypercholesterolemias germline 19 11102663 GAGTGACAGTTCAATCCTGTCTCTTCTGTAGTGTCTGTCACCTGCAAATCCGGGGACTTCA 587784425 168826 NM_005445.3(SMC3):c.1964G>A (p.Gly655Asp) SMC3 Apr 01, 2015 MedGen:C1853099,OMIM:610759 Cornelia de Lange syndrome 3 germline 10 110596398 ACAGACCTATTACATATGTTTTGTTTATAGGTGACCAAGTCAGCCATCGGGGTGCTCTAAC 104886182 35861 NM_000495.4(COL4A5):c.2431G>A (p.Gly811Arg) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108614946 GTTGGACCAAATGGACAACCTGGACCAATGGGACCTCCTGGGCTGCCAGGAATAGGTGTTC 179489 67720 NM_000218.2(KCNQ1):c.502G>A (p.Gly168Arg) KCNQ1 Jul 19, 2017 MedGen:CN230736;MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MeSH:D008133,MedGen:C0023976,SNOMED CT:9651007;MedGen:C0035828,OMIM:192500,Orphanet:ORPHA101016,SNOMED CT:20852007;MedGen:CN517202 Cardiovascular phenotype;Congenital long QT syndrome;Long QT syndrome;Long QT syndrome 1;not provided germline 11 2570652 CTGCAGGAGATCGTGCTGGTGGTGTTCTTCGGGACGGAGTACGTGGTCCGCCTCTGGTCCG 587776927 48153 NM_019032.5(ADAMTSL4):c.79-1G>A ADAMTSL4 Mar 01, 2010 MedGen:C2673634,OMIM:225100 Ectopia lentis, isolated autosomal recessive germline 1 150552897 CCAATTCTGTCTGACCTTTTTCTCTATATAGGTGTTGTCCGGACACTCTCTTCAGACACCT -1 481720 NM_002317.6(LOX):c.1035+1G>A LOX Dec 26, 2017 MedGen:CN517202 not provided germline 5 122074012 AGGCGATTTGCATGTACTGCACACACACAGGTATGTTGGCACCCTGAAATCCAGAACCTCA 387906419 24608 m.7497G>A MT-TS1 Jan 01, 2003 MedGen:C4016627 Exercise intolerance, muscle pain, and lactic acidemia germline MT 7497 CCCCCAAAGCTGGTTTCAAGCCAACCCCATGGCCTCCATGACTTTTTCAAAAAGGTATTAG 121913008 31851 NM_001943.4(DSG2):c.137G>A (p.Arg46Gln) DSG2 Oct 03, 2017 MedGen:C0349788,Orphanet:ORPHA247,SNOMED CT:253528005,SNOMED CT:281170005;MedGen:C1857777,OMIM:610193;MedGen:CN517202 Arrhythmogenic right ventricular cardiomyopathy;Arrhythmogenic right ventricular cardiomyopathy, type 10;not provided germline 18 31519858 AGCTGCTTCCTAAACATCCTCATTTAGTGCGGCAAAAGCGCGCCTGGATCACCGCCCCCGT 797045047 480559 NM_007327.3(GRIN1):c.1858G>A (p.Gly620Arg) GRIN1 Jan 09, 2018 MedGen:C3280282,OMIM:614254 Neurodevelopmental disorder with or without hyperkinetic movements and seizures, autosomal dominant germline 9 137162510 TCCTGGGGCGTCCTGCTCAACTCCGGCATCGGGGAAGGTAAGGCCCCGCCCGGCCCGCCTG 199472726 67777 NM_000218.2(KCNQ1):c.815G>A (p.Gly272Asp) KCNQ1 Jul 20, 2017 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MeSH:D008133,MedGen:C0023976,SNOMED CT:9651007;MedGen:CN517202 Congenital long QT syndrome;Long QT syndrome;not provided germline 11 2572880 TGATAACCACCCTGTACATCGGCTTCCTGGGCCTCATCTTCTCCTCGTACTTTGTGTACCT 1057517835 360353 NM_003244.3(TGIF1):c.269G>A (p.Arg90His) TGIF1 Jun 22, 2015 MedGen:CN517202 not provided germline 18 3457390 TTCAGGTCTGTAACTGGTTCATCAACGCCCGCCGCAGGCTCCTCCCTGACATGCTGAGAAA 770551610 226598 NM_006060.5(IKZF1):c.485G>A (p.Arg162Gln) IKZF1 Aug 25, 2016 MedGen:C4225173,OMIM:616873,Orphanet:ORPHA317473 Immunodeficiency, common variable, 13 germline 7 50382603 CCTCATTCACCCAGAAGGGCAACCTGCTCCGGCACATCAAGCTGCATTCCGGGGAGAAGCC 80356482 211810 NM_000151.3(G6PC):c.562G>A (p.Gly188Ser) G6PC Oct 17, 2016 MedGen:C2919796,OMIM:232200;MedGen:CN517202 Glycogen storage disease type 1A;not provided germline 17 42909418 CCTCATCAAGTTGTTGCTGGAGTCCTGTCAGGTATGGGCTGATCTGACTCCCTTCCTTCTC 886041353 264611 NM_000062.2(SERPING1):c.52-1G>A SERPING1 Sep 21, 2016 MedGen:CN517202 not provided germline 11 57599878 AAAAAATGAAACTCAGTTTCTTGAACCACAGGATAGAGCCTCCTCAAATCCAAATGCTACC 886043392 270673 NM_000023.3(SGCA):c.747+1G>A SGCA Mar 03, 2016 MedGen:C2936332,OMIM:608099,Orphanet:ORPHA62 Limb-girdle muscular dystrophy, type 2D germline 17 50169255 TTCCGCGTTGACTGGTGCAATGTGACCCTGGTGAGGAGGGACCCTGGGTCCGGGGGTGGGG 121909389 16345 NM_001174089.1(SLC4A11):c.1343G>A (p.Gly448Asp) SLC4A11 Mar 01, 2008 MedGen:C0544008 Corneal endothelial dystrophy germline 20 3230587 TGGACTTCAACTCCTTCTACGCATGGACGGGCCTGTGGAATAGTTTCTTCCTTGCGCTTTA 886041195 264889 NM_000397.3(CYBB):c.1272G>A (p.Trp424Ter) CYBB Oct 14, 2016 MedGen:CN517202 not provided germline X 37805126 ACCCTTCGCATCCATTCTCAAGTCAGTCTGGTACAAATATTGCAATAACGCCACCAATCTG 1057524307 369315 NM_022726.3(ELOVL4):c.506G>A (p.Trp169Ter) ELOVL4 Aug 28, 2017 MedGen:CN517202 not provided germline 6 79921660 TGTATCATCACTGTACGATGTTTACCTTGTGGTGGATTGGAATTAAGTGGGTTGCAGGAGG 863224192 211322 NM_015713.4(RRM2B):c.599G>A (p.Gly200Glu) RRM2B Mar 23, 2012 MedGen:CN517202 not provided germline 8 102218899 TTGCTGCTGTAGAAGGAGTTTTCTTCTCAGGATCTTTTGCTGCTATATTCTGGCTAAAGAA 375879489 22832 NM_004482.3(GALNT3):c.1524+5G>A GALNT3 Jun 01, 2004 MedGen:C1876187,OMIM:211900,OMIM:610233,Orphanet:ORPHA306661 Tumoral calcinosis, familial, hyperphosphatemic germline 2 165754927 ACCTTAATCCTGTTATATCTGGATACGTGAGTATTTTCCTGTTCCTTTTTTAATTAATATA 587782590 152331 NM_000059.3(BRCA2):c.425+1G>A BRCA2 Oct 02, 2015 MedGen:C2675520,OMIM:612555;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 2;Hereditary cancer-predisposing syndrome germline 13 32325185 TCCACTTCTAAATTCTTGTCTTAGTGAAAGGTATGATGAAGCTATTATATTAAAATATTTA 878853281 214800 NM_014334.3(FRRS1L):c.845G>A (p.Trp282Ter) FRRS1L Aug 25, 2016 Human Phenotype Ontology:HP:0002072,MedGen:C0008489,Orphanet:ORPHA306715;MedGen:C4310770,OMIM:616981;Human Phenotype Ontology:HP:0002448,MedGen:C1838578;Human Phenotype Ontology:HP:0001250,MedGen:C0036572 Chorea;Epileptic encephalopathy, early infantile, 37;Progressive encephalopathy;Seizures germline;inherited 9 109141360 TGCATTTGAGTTGGTATTATCTGTTTGCTTGGGGTCCAGCCATTCAGGGTAAGCTTACATT 121908849 21589 NM_003722.4(TP63):c.797G>A (p.Arg266Gln) TP63 Oct 05, 2016 MedGen:C1863204,OMIM:103285,Orphanet:ORPHA978;MedGen:C1858562,OMIM:604292;MedGen:CN517202 ADULT syndrome;Ectrodactyly, ectodermal dysplasia, and cleft lip/palate syndrome 3;not provided germline 3 189866712 GACAGATTGCCCCTCCTAGTCATTTGATTCGAGTAGAGGGGAACAGCCATGCCCAGTATGT 370828455 205775 NM_015346.3(ZFYVE26):c.4181G>A (p.Trp1394Ter) ZFYVE26 Apr 23, 2014 MedGen:C1849128,OMIM:270700,Orphanet:ORPHA100996 Spastic paraplegia 15 germline 14 67782971 GGCAGAGTCTGGCAGTGAATCTCTGTGGTTGGGCCAGTCTTTCTACCGTTCTCCTGGGCCT 121912939 99796 NM_001848.2(COL6A1):c.868G>A (p.Gly290Arg) COL6A1 Jun 16, 2017 MedGen:CN029274,OMIM:158810;MedGen:CN033863,OMIM:254090;MedGen:CN517202 Bethlem myopathy 1;Ullrich congenital muscular dystrophy 1;not provided germline 21 45989617 CCATCTCCTCCTGTGTTCCAGGGAAGACCCGGGGACCTCGGACCTGTTGGGTACCAGGGAA 776217028 434329 NM_000527.4(LDLR):c.2089G>A (p.Ala697Thr) LDLR - MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11120471 ATCAACCCCCACTCGCCCAAGTTTACCTGCGCCTGCCCGGACGGCATGCTGCTGGCCAGGG 724159946 171929 NM_001987.4(ETV6):c.1106G>A (p.Arg369Gln) ETV6 Mar 03, 2015 Human Phenotype Ontology:HP:0004377,MeSH:D019337,MedGen:C0376545,SNOMED CT:129154003;MedGen:CN130080;MedGen:C4015537,OMIM:616216 Hematologic neoplasm;Thrombocytopenia;Thrombocytopenia 5 germline 12 11884541 GATGGGAGGACAAAGAATCCAAAATATTCCGGATAGTGGATCCCAACGGACTGGCTCGACT 3814290 47011 NM_181882.2(PRX):c.1951G>A (p.Asp651Asn) PRX Nov 01, 2012 MedGen:C3540453,OMIM:614895,Orphanet:ORPHA99952;MedGen:CN517202 Charcot-Marie-Tooth disease, demyelinating, type 4f;not provided germline 19 40396401 CTCCCGAAGGTGCCCGAGATGGCTGTGCCCGATGTGCACCTCCCGGAAGTGCAGCTCCCGA 104894401 32056 NM_004004.5(GJB2):c.428G>A (p.Arg143Gln) GJB2 Feb 16, 2017 MedGen:C2675750,OMIM:601544;MedGen:C2673759,OMIM:220290;MedGen:CN517202 Deafness, autosomal dominant 3a;Deafness, autosomal recessive 1A;not provided germline;unknown 13 20189154 GGTGGACCTACACAAGCAGCATCTTCTTCCGGGTCATCTTCGAAGCCGCCTTCATGTACGT 727503204 174779 NM_000256.3(MYBPC3):c.1351+1G>A MYBPC3 Dec 19, 2016 Human Phenotype Ontology:HP:0001638,MedGen:C0878544,Orphanet:ORPHA167848,SNOMED CT:85898001;Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005 Cardiomyopathy;Hypertrophic cardiomyopathy;Primary familial hypertrophic cardiomyopathy germline 11 47343020 AGAAGTGTAGCACGGAGCTCTTTGTGAAAGGTGGGCCTGGGACCTGAGGATGTGGGAACCT 121917721 15247 NM_000285.3(PEPD):c.826G>A (p.Asp276Asn) PEPD Sep 11, 2017 MedGen:C0268532,OMIM:170100;MedGen:CN517202 Prolidase deficiency;not provided germline 19 33401862 GCCCTGCCTTCCTCTCTCCGCAGCCTGTTCGACATGGGCGGTGAGTATTACTGCTTCGCTT 267607175 15062 NM_001006657.1(WDR35):c.2623G>A (p.Ala875Thr) WDR35 May 24, 2017 MedGen:C3150874,OMIM:613610;MedGen:CN169374 Cranioectodermal dysplasia 2;not specified germline 2 19933469 ATGTTTGTCAGAGTTGGAATGTGTGAACAAGCAGTGACTGCATTTTTGAAATGTAGTCAAC 397508216 67933 NM_000492.3(CFTR):c.1487G>A (p.Trp496Ter) CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline 7 117559558 GAAGAATTTCATTCTGTTCTCAGTTTTCCTGGATTATGCCTGGCACCATTAAAGAAAATAT 587777286 132031 NM_000387.5(SLC25A20):c.576G>A (p.Trp192Ter) SLC25A20 Dec 01, 2013 MedGen:C0342791,OMIM:212138,Orphanet:ORPHA159,SNOMED CT:238003000 Carnitine acylcarnitine translocase deficiency germline 3 48859587 TAGTGGAATGTATTTCATGACATATGAATGGCTGAAAAATATCTTCACTCCGGAGGGAAAG 875989911 228151 NM_000527.4(LDLR):c.938G>A (p.Cys313Tyr) LDLR Mar 25, 2016 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11107512 GGGACTGGTCAGATGAACCCATCAAAGAGTGCGGTGAGTCTCGGTGCAGGCGGCTTGCAGA 267606611 24690 m.9438G>A MT-CO3 Oct 01, 1995 Human Phenotype Ontology:HP:0001112,MedGen:C0917796,OMIM:535000,Orphanet:ORPHA104,SNOMED CT:58610003 Leber's optic atrophy germline MT 9438 CAAGGCCACCACACACCACCTGTCCAAAAAGGCCTTCGATACGGGATAATCCTATTTATTA 773954226 214269 NM_024790.6(CSPP1):c.3205+1G>A CSPP1 Feb 23, 2015 MedGen:C3810212,OMIM:615636 Joubert syndrome 21 unknown 8 67179927 CATTATTGGAATCTGATAGTGCTTTTATTGGTGAGTATATTTATTTTATTAAGGCTATATT 121907932 18474 NM_024105.3(ALG12):c.437G>A (p.Arg146Gln) ALG12 Jun 15, 2007 MedGen:C2931001,OMIM:607143,Orphanet:ORPHA79324,SNOMED CT:711155008 ALG12-congenital disorder of glycosylation germline 22 49910466 TGCAGTTCCACCTGATGTTCTACTGCACGCGGACACTGCCCAATGTGCTGGCCCTGCCTGT 137853093 22700 NM_032387.4(WNK4):c.1684G>A (p.Glu562Lys) WNK4 Feb 16, 2017 MedGen:C1840390,OMIM:614491,Orphanet:ORPHA88939 Pseudohypoaldosteronism type 2B germline 17 42787485 AGTGTCTTCCCCCCTGAGCCTGAGGAGCCAGAGGCAGACCAGCACCAGCCCTTCCTTTTCC 1057518215 359831 NM_016628.4(WAC):c.1556+1G>A WAC Nov 08, 2016 MedGen:CN517202 not provided germline 10 28614686 TGTCTCTCCTCGAAGTCTTCAGCGCTCAAGGTAGGTTGATATTGTATATTGAGACCACATT 1052471595 431000 NM_000263.3(NAGLU):c.934G>A (p.Asp312Asn) NAGLU Jun 07, 2017 MedGen:C0086648,OMIM:252920,Orphanet:ORPHA79270,SNOMED CT:59990008 Mucopolysaccharidosis, MPS-III-B inherited 17 42541119 GAGTTTGGCACAGACCACATCTATGGGGCCGACACTTTCAATGAGATGCAGCCACCTTCCT -1 481662 NM_003494.3(DYSF):c.5904G>A (p.Trp1968Ter) DYSF Nov 16, 2017 MedGen:CN517202 not provided germline 2 71679193 CCTTTTTGAGCAGAAAACAGTGAAGGGCTGGTGGCCCTGTGTAGCAGAAGAGGGTGAGAAG 794726720 187773 NM_001165963.1(SCN1A):c.3615G>A (p.Trp1205Ter) SCN1A Dec 20, 2014 MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002 Severe myoclonic epilepsy in infancy de novo 2 166013834 TGTGGAAGAAGGCAGAGGAAAACAATGGTGGAACCTGAGAAGGACGTGTTTCCGAATAGTT 267607523 77360 NM_002055.4(GFAP):c.214G>A (p.Glu72Lys) GFAP Jan 08, 2015 MedGen:C0270726,OMIM:203450,Orphanet:ORPHA58,SNOMED CT:81854007;MedGen:CN517202 Alexander's disease;not provided germline 17 44915273 TTCAAGGAGACCCGGGCCAGTGAGCGGGCAGAGATGATGGAGCTCAATGACCGCTTTGCCA 45517105 75968 NM_000548.4(TSC2):c.337-1G>A TSC2 Aug 10, 2017 MedGen:C1860707,OMIM:613254;MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000;MedGen:CN517202 Tuberous sclerosis 2;Tuberous sclerosis syndrome;not provided germline 16 2054295 GCTCTGCTGATCCTGTGGCTTTTGTCTTTAGGGCGAGCGTTTGGGGGTCCTCAGAGCCCTC 28937873 20571 NM_014249.3(NR2E3):c.932G>A (p.Arg311Gln) NR2E3 Aug 24, 2017 MedGen:C1849394,OMIM:268100,Orphanet:ORPHA53540;MedGen:C0339541;MedGen:CN239387;MedGen:CN517202 Enhanced s-cone syndrome;Goldmann-Favre syndrome;NR2E3-Related Disorders;not provided germline 15 71813573 GTGTCCTGCAGGAAACTATCTCTCGGTTCCGGGCATTGGCGGTGGACCCCACGGAGTTTGC 80338884 34216 NM_003227.3(TFR2):c.1330G>A (p.Ala444Thr) TFR2 Jun 09, 2011 MedGen:C1858664,OMIM:604250,Orphanet:ORPHA225123 Hemochromatosis type 3 not provided 7 100629313 GATGCATGGGGCCCAGGAGCAGCTAAATCCGCTGTGGGGACGGCTATACTCCTGGAGCTGG 397517341 55153 NM_022124.5(CDH23):c.5712+1G>A CDH23 Feb 20, 2012 MedGen:C1832845,OMIM:601067 Usher syndrome, type 1D germline 10 71785101 CGCGAGCGGGCCTTCTTCATCAATGCCACGGTAGGGCCTAGACTGACCCCAGGGAGCTTCC 104894175 21977 NM_005029.3(PITX3):c.38G>A (p.Ser13Asn) PITX3 Jun 01, 1998 MedGen:C0009691 Cataract, congenital germline 10 102232043 TCGGCCTGCTCAGCGAGGCAGAGGCCCGGAGCCCTGCCCTGTCGCTGTCAGACGCTGGCAC 879253716 25038 NM_000425.4(L1CAM):c.1939+5G>A L1CAM Jan 01, 2004 MedGen:C4017784 Hydrocephalus, X-linked, with hirschsprung disease germline X 153867795 AGAAGACCACAATGCCCCCATTGAGAGTAAGAGGCTTGAGCTCAGTGCCACCCCACCGTCA 80356516 34144 NM_001457.3(FLNB):c.5500G>A (p.Gly1834Arg) FLNB Oct 09, 2008 MedGen:C1835564,OMIM:150250 Larsen syndrome, dominant type not provided 3 58145995 GTTTCTGCATACGGTCCAGGCCTCGTGTATGGAGTGGCCAACAAAACTGCCACCTTCACCA 863224149 212005 NM_000284.3(PDHA1):c.292-1G>A PDHA1 Aug 08, 2014 MedGen:CN517202 not provided germline X 19351280 TGCCTCATAGTTTCTCCTTCCTCTAACACAGGAAGCTTGCTGTGTGGGCCTGGAGGCCGGC 61754382 105415 NM_000372.4(TYR):c.1037-1G>A TYR Aug 12, 2015 MedGen:C0268494,OMIM:203100,Orphanet:ORPHA79431,SNOMED CT:6483008;MedGen:CN517202 Tyrosinase-negative oculocutaneous albinism;not provided germline 11 89227822 CATATTTTTTTCATTTTTTTTTAATGAACAGGATTTGCTAGTCCACTTACTGGGATAGCGG 121434457 24663 m.5650G>A MT-TA Oct 01, 2003 MedGen:C4016604 Myotonic dystrophy-like myopathy germline MT 5650 AACGCAAATCAGCCACTTTAATTAAGCTAAGCCCTTACTAGACCAATGGGACTTAAACCCA 1060502202 402515 NM_023036.4(DNAI2):c.876G>A (p.Trp292Ter) DNAI2 Jul 26, 2016 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244 Ciliary dyskinesia germline 17 74301057 TCGCCCCTCCTCCCACCAGGTCATGTGGTGGGACATCCGAAAGATGAGCGAGCCCACTGAA 121918317 21765 NM_003165.3(STXBP1):c.1631G>A (p.Gly544Asp) STXBP1 Jun 01, 2008 MedGen:C2677326,OMIM:612164 Early infantile epileptic encephalopathy 4 germline 9 127682489 GCCCCCGCCTCATCATTTTCATCCTTGGGGGTGTGAGCCTGAATGAGATGCGCTGCGCCTA -1 459279 NM_000118.3(ENG):c.1235G>A (p.Cys412Tyr) ENG May 22, 2017 MedGen:C0039445,OMIM:187300,Orphanet:ORPHA774,SNOMED CT:21877004 Osler hemorrhagic telangiectasia syndrome germline 9 127819937 AGTTTGTCTTGCGCAGTGCTTACTCCAGCTGTGGCATGCAGGTGTCAGCAAGTATGATCAG 761780097 16706 NM_000785.3(CYP27B1):c.589+1G>A CYP27B1 Nov 01, 1999 MedGen:C0268689,OMIM:264700,Orphanet:ORPHA289157,SNOMED CT:67049004 Vitamin D-dependent rickets, type 1 germline 12 57765296 CGGGGGAATTTTACAAGTTCGGACTGGAAGGTGAGTCCCAGGACAGAGCTGGGCAGGCGTC 104894729 27463 NM_000363.4(TNNI3):c.575G>A (p.Arg192His) TNNI3 Aug 21, 2017 Human Phenotype Ontology:HP:0001638,MedGen:C0878544,Orphanet:ORPHA167848,SNOMED CT:85898001;MedGen:C1861861,OMIM:115210;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Cardiomyopathy;Familial restrictive cardiomyopathy 1;Primary familial hypertrophic cardiomyopathy;not provided germline 19 55151892 TCCAGGAAAACCGGGAGGTGGGAGACTGGCGCAAGAACATCGATGCACTGAGTGGAATGGA 1085307205 414139 NM_001204.6(BMPR2):c.296G>A (p.Cys99Tyr) BMPR2 - MedGen:C0152171,OMIM:178600,SNOMED CT:26174007 Primary pulmonary hypertension germline 2 202467567 GAGATCCCCAAGAGTGTCACTATGAAGAATGTGTAGTAACTACCACTCCTCCCTCAATTCA 431905514 102921 NM_001044.4(SLC6A3):c.1031+1G>A SLC6A3 Jul 12, 2017 MedGen:C2751067,OMIM:613135,Orphanet:ORPHA238455 Infantile Parkinsonism-dystonia germline 5 1416097 CTACAACAAGTTCACCAACAACTGCTACAGGTGAGCCCCTAGCAGGGCCAGGCAGGGGCCT 121434363 17172 NM_001128225.2(SLC39A13):c.221G>A (p.Gly74Asp) SLC39A13 Jan 01, 2008 MedGen:C2676510,OMIM:612350,Orphanet:ORPHA157965 Spondylocheirodysplasia, Ehlers-Danlos syndrome-like germline 11 47410315 GGCTGGACACCTGGATCTGCTCCCTCCTGGGTTCCCTCATGGTGGGGCTCAGTGGGGTCTT 397518023 57707 NM_206933.2(USH2A):c.5858-1G>A USH2A Jan 18, 2012 MedGen:C1848634,OMIM:276901 Usher syndrome, type 2A germline 1 216070293 TTTCCCTATTTTCTCTTTTATTCCTTCACAGCTCCACAAAGTGTGCCAACTCCCTCAAGAG 104894277 15520 NM_000317.2(PTS):c.166G>A (p.Val56Met) PTS Jan 01, 1998 MedGen:C0878676,OMIM:261640,Orphanet:ORPHA13 6-pyruvoyl-tetrahydropterin synthase deficiency germline 11 112230210 TTTTTTGTATTTTGTTTTCTTTCCATAGTTGTGGTGACAGTACATGGAGAGGTATGTGCAG 1064794000 407383 NM_006766.4(KAT6A):c.4645G>A (p.Gly1549Ser) KAT6A May 12, 2017 MedGen:CN517202 not provided germline 8 41933575 TCAGACCACTCTCAGCAGGTGGTGGACAGCGGCTTCAGTGACCTGGGCAGCATTGAGAGCA 28930068 32662 NM_000069.2(CACNA1S):c.3716G>A (p.Arg1239His) CACNA1S Mar 01, 2017 MedGen:C3714580,OMIM:170400;MedGen:CN517202 Hypokalemic periodic paralysis 1;not provided germline 1 201053538 GCATCTCCAGCGCCTTCTTCCGCCTGTTCCGTGTCATGAGGCTGATCAAGCTGCTGAGCCG 104886157 35815 NM_000495.4(COL4A5):c.2023G>A (p.Gly675Ser) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108601467 CCTGGCTTGCCTGGTAACCCAGGCAGAGATGGTGATGTAGGTCTTCCAGGTATGTGAGGAA 121918404 31657 NM_001976.4(ENO3):c.1121G>A (p.Gly374Glu) ENO3 Aug 01, 2001 MedGen:C2752027,OMIM:612932,Orphanet:ORPHA99849 Glycogen storage disease type 13 germline 17 4956626 GCTGGGGGGTGATGGTGAGCCACCGCTCTGGGGAGACTGAGGACACATTCATTGCTGACCT 121434538 32865 NM_031226.2(CYP19A1):c.628G>A (p.Glu210Lys) CYP19A1 Jan 01, 2004 MedGen:C0878680,OMIM:613546,Orphanet:ORPHA91 Aromatase deficiency germline 15 51222349 AACACGCTCTTCTTGAGGATCCCTTTGGACGGTACTGAAATTTTCACTCTCACATCTTGAC 1135401790 424640 NM_014795.3(ZEB2):c.3170G>A (p.Cys1057Tyr) ZEB2 Jan 06, 2017 MedGen:C1856113,OMIM:235730,Orphanet:ORPHA2152 Mowat-Wilson syndrome de novo 2 144389926 GGCTTCACTCGGGCGAGAAGCCCTATCAGTGTGATAAATGTGGCAAGCGCTTCTCACACTC -1 478383 NM_001042492.2(NF1):c.7869+1G>A NF1 Feb 05, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 17 31357091 AAGATCCAGGCGCTGCTTCTTACTGTTCTAGTAAGGATTTCCCCTTTTTGAGTCCCCCACC 267606681 23339 NM_139343.2(BIN1):c.461G>A (p.Arg154Gln) BIN1 Feb 09, 2010 MedGen:C0410204,OMIM:255200,Orphanet:ORPHA169186,SNOMED CT:240081004 Autosomal recessive centronuclear myopathy germline 2 127068982 GGCGCAAGCTGGTGGACTACGACAGTGCCCGGCACCACTACGAGTCCCTTCAAACTGCCAA 587779450 106884 NM_000090.3(COL3A1):c.2771G>A (p.Gly924Asp) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189004091 CTGGCAGCCCTGGAGTGTCTGGACCAAAAGGTGATGCTGGCCAACCAGGAGAGAAGGGATC 200656442 106526 NM_144672.3(OTOA):c.1352G>A (p.Gly451Asp) OTOA Sep 01, 2013 MedGen:C1846896,OMIM:607039 Deafness, autosomal recessive 22 germline 16 21715016 TGCTGTCTTTCTACAATGTCAGCCAGATGGGCGCACTGCTGGCTGGGGTCAGCACCCAGGC 587776403 36066 NM_000495.4(COL4A5):c.4297+1G>A COL4A5 Nov 21, 2016 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive germline X 108686130 AAGGAGACCCAGGTCTGCCAGGACAGCCAGGTAAGACAAGTAAAACATGCTGTTGGTGGAG 371669862 270910 NM_001006657.1(WDR35):c.1288+1G>A WDR35 Mar 22, 2016 MedGen:C3150874,OMIM:613610 Cranioectodermal dysplasia 2 germline 2 19960553 CACCCTTGGATCCCAAATACATTGATATTGGTAAGGAAATGTTGATATTTATTTCTTTTCC 387906425 24736 m.13730G>A MT-ND5 Sep 19, 2013 Human Phenotype Ontology:HP:0001112,MedGen:C0917796,OMIM:535000,Orphanet:ORPHA104,SNOMED CT:58610003 Leber's optic atrophy germline MT 13730 AACGCCTGGCAGCCGGAAGCCTATTCGCAGGATTTCTCATTACTAACAACATTTCCCCCGC -1 440851 NM_000297.3(PKD2):c.603G>A (p.Trp201Ter) PKD2 May 03, 2017 MedGen:CN517202 not provided germline 4 88019465 TTTTCTTCATTATTATTTTAAAGGTCTCTGGGGAACAAGACTCATGGAGGAAAGCAGCACT 770185023 264652 NM_014714.3(IFT140):c.1010-1G>A IFT140 Jun 01, 2017 MedGen:C0265275,Orphanet:ORPHA474,SNOMED CT:75049004;MedGen:CN517202 Jeune thoracic dystrophy;not provided germline;paternal 16 1586276 CTGTTCACATGCAGTTTGTTTCTACCTGTAGGTCTTCTGGCCGCTGGTACCGACAGAGGGC 80358211 20046 NM_153212.2(GJB4):c.35G>A (p.Gly12Asp) GJB4 Apr 01, 2003 MedGen:CN258420,OMIM:617524 Erythrokeratodermia variabilis et progressiva 2 germline 1 34761289 ACTGGGCATTTCTGCAGGGCCTGCTGAGTGGCGTGAACAAGTACTCCACAGTGCTGAGCCG 878855318 243869 NM_001972.3(ELANE):c.597+1G>A ELANE Sep 18, 2015 MedGen:CN517202 not provided germline 19 855795 GTGAGGGGCCGGCAGGCCGGCGTCTGTTTCGTACGTGCCCTGGGTGTCCCTCTGCTCCCCA 120074132 18007 NM_000271.4(NPC1):c.2873G>A (p.Arg958Gln) NPC1 Jun 01, 2001 MedGen:C3179455,OMIM:257220 Niemann-Pick disease type C1 germline 18 23539393 ACTGGGTGAAGCCACAGTCGTCTTGCTGTCGAGTGGACAATATCACTGACCAGTTCTGCAA 786201014 181523 NM_017831.3(RNF125):c.336G>A (p.Met112Ile) RNF125 Mar 11, 2015 MedGen:C4015710,OMIM:616260 Tenorio syndrome germline 18 32042196 TGTTTTTATGTAGGTTTGCCTCAGTGAAATGAGGGCACATATTCGGACTTGTCAGAAGTAC 796052127 200982 NM_203290.3(POLR1C):c.326G>A (p.Arg109His) POLR1C Jul 07, 2015 MedGen:C4225305,OMIM:616494 Leukodystrophy, hypomyelinating, 11 germline 6 43519782 CCATTGTTCAGGATGAGATTCTTGCTCACCGTCTGGGGCTCATTCCCATTCATGCTGATCC 137853124 20022 NM_020366.3(RPGRIP1):c.194G>A (p.Trp65Ter) RPGRIP1 May 01, 2001 MedGen:C1854260,OMIM:613826 Leber congenital amaurosis 6 germline 14 21294785 AAGATCACATGTTGGTGAAGGAGCTTTCTTGGAAGCAACAGGATGAGATCAAAAGGTACTT 730880566 179257 NM_000256.3(MYBPC3):c.2414G>A (p.Gly805Asp) MYBPC3 Apr 05, 2013 MedGen:CN517202 not provided germline 11 47337579 AGACCAGAGCTGCCACCTCCCCTGAGCCAGGCTACATCCTGGAGCGCAAGAAGAAGAAGAG 202022024 431406 NM_012478.3(WBP2):c.478G>A (p.Ala160Thr) WBP2 Aug 24, 2017 MedGen:CN417138,OMIM:617639 DEAFNESS, AUTOSOMAL RECESSIVE 107 germline 17 75847850 AGCGGGGCCTATGTCTATCCCCCGCCAGTCGCCAATGGAATGTACCCCTGCCCTCCTGGCT 797045082 205141 NM_001164712.1(AMT):c.870G>A (p.Trp290Ter) AMT Oct 16, 2014 Human Phenotype Ontology:HP:0008288,MedGen:C0751748,OMIM:605899,Orphanet:ORPHA407,SNOMED CT:237939006 Non-ketotic hyperglycinemia germline 3 49418978 CACTACACCTGTGGAGGGCAGCCTCAGTTGGACACTGGGTGAGCTGGGCCAGCACTAAAGG 786204859 187355 NM_000314.6(PTEN):c.407G>A (p.Cys136Tyr) PTEN May 23, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1959582,OMIM:601728,Orphanet:ORPHA306498;MedGen:CN517202 Hereditary cancer-predisposing syndrome;PTEN hamartoma tumor syndrome;not provided germline 10 87933166 CTGGAAAGGGACGAACTGGTGTAATGATATGTGCATATTTATTACATCGGGGCAAATTTTT 794726862 190164 NM_006744.3(RBP4):c.217G>A (p.Ala73Thr) RBP4 Apr 23, 2015 MedGen:C4225330,OMIM:616428 Microphthalmia, isolated, with coloboma 10 germline 10 93600698 TTCTCCGTGGACGAGACCGGCCAGATGAGCGCCACAGCCAAGGGCCGAGTCCGTCTTTTGA 398124602 102513 NM_000056.4(BCKDHB):c.952-1G>A BCKDHB Aug 23, 2013 MedGen:C0024776,OMIM:248600,SNOMED CT:27718001 Maple syrup urine disease germline 6 80273134 TTTAACATCAGGTTTTTCTTTTCTCTTTCAGTCTGTGATCAAAACAGGGCGACTGCTAATC 587779512 106957 NM_000090.3(COL3A1):c.2105G>A (p.Gly702Asp) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188999367 CAGGACTTAGAGGTGGAGCTGGTCCCCCTGGTCCCGAAGGAGGAAAGGTAACTCCACAGCA 587776774 27712 NM_002734.4(PRKAR1A):c.892-1G>A PRKAR1A Sep 14, 2012 MedGen:C4016392 Adrenocortical tumor, somatic somatic 17 68529919 TTTGTTTAGCTTTTTGGTGATTTTATTATAGGGGTCAGCTGCTGTGCTACAACGTCGGTCA 1064794533 409653 NM_020988.2(GNAO1):c.709G>A (p.Glu237Lys) GNAO1 Aug 30, 2017 MedGen:CN517202 not provided germline 16 56336846 GCGCTCAGCGGCTATGACCAGGTGCTCCACGAAGACGAAACCACGGTGAGTGGCCTGGGCC 137852346 25451 NM_000402.4(G6PD):c.896G>A (p.Cys299Tyr) G6PD Dec 09, 2013 MedGen:C2720289,OMIM:300908,Orphanet:ORPHA466026;na Anemia, nonspherocytic hemolytic, due to G6PD deficiency;G6PD AVEIRO germline X 154533634 TGATGCAGAACCACCTACTGCAGATGCTGTGTCTGGTGGCCATGGAGAAGCCCGCCTCCAC 879255056 246383 NM_000527.4(LDLR):c.1859G>A (p.Trp620Ter) LDLR Mar 30, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11120105 CCTTGCTGCCTGTTTAGGACAAAGTATTTTGGACAGATATCATCAACGAAGCCATTTTCAG 1060505034 404664 NM_001025.4(RPS23):c.200G>A (p.Arg67Lys) RPS23 Aug 11, 2017 MedGen:CN241840,OMIM:617412;MedGen:CN517202 MacInnes syndrome;not provided de novo;germline 5 82276483 TTGAAGCCAAACAGCCAAATTCTGCCATTAGGAAGTGTGTAAGGGTCCAGCTGATCAAGAA -1 481109 NM_014585.5(SLC40A1):c.541G>A (p.Asp181Asn) SLC40A1 Jul 15, 2013 MedGen:C1853733,OMIM:606069,Orphanet:ORPHA139491 Hemochromatosis type 4 germline 2 189565573 CTAGATATGAATGCCACAATACGAAGGATTGACCAGTTAACCAACATCTTAGCCCCCATGG 749968109 204233 NM_052859.3(RFT1):c.1325G>A (p.Arg442Gln) RFT1 Dec 01, 2012 MedGen:C2677590,OMIM:612015,Orphanet:ORPHA244310 Congenital disorder of glycosylation type 1N germline 3 53092502 TCTTGGCCAACTGCTTTAACATGGGCATTCGGATCACGCAGAGCCTTTGCTTCATCCACCG 794727982 196363 NM_000540.2(RYR1):c.12612G>A (p.Trp4204Ter) RYR1 Aug 15, 2014 MedGen:C0751951,OMIM:117000,Orphanet:ORPHA597,SNOMED CT:43152001;MedGen:CN031421,OMIM:145600 Central core disease;Malignant hyperthermia, susceptibility to, 1 germline 19 38561442 CGAGATCTCAGAGACCAACCGCGCCCAGTGGGAGATGCCCCAGGTCAGGGAACCCGCGCGC 786201041 183060 NM_000314.6(PTEN):c.1026+1G>A PTEN May 26, 2017 MedGen:CN072330,OMIM:158350;MedGen:C0027672,SNOMED CT:699346009 Cowden syndrome 1;Hereditary cancer-predisposing syndrome germline 10 87961119 GCCAACCGATACTTTTCTCCAAATTTTAAGGTCAGTTAAATTAAACATTTTGTGGGGGTTG 398123794 100240 NM_003494.3(DYSF):c.5509G>A (p.Asp1837Asn) DYSF Sep 04, 2012 MedGen:C1850889,OMIM:253601,Orphanet:ORPHA268;MedGen:C1850808,OMIM:254130,Orphanet:ORPHA45448 Limb-girdle muscular dystrophy, type 2B;Miyoshi muscular dystrophy 1 germline 2 71669191 GACCTGAGCCTCACGGGGGAGAAGATGAGCGACATTTATGTGAAAGGGTAGGGAGCCAGCG 1131691099 420782 NM_001042492.2(NF1):c.2088G>A (p.Trp696Ter) NF1 Dec 22, 2015 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 17 31226521 ACTAGAAGTGGCCCTGTACATGTTTCTGTGGAACCCTGACACTGAAGCTGTTCTGGTTGCC 63751177 104054 NM_002087.3(GRN):c.911G>A (p.Trp304Ter) GRN May 25, 2017 MedGen:CN517202 not provided germline 17 44351438 ATACCTGCTGCCGTCTACAGTCGGGGGCCTGGGGCTGCTGCCCTTTTACCCAGGTACCCAG 879254797 245996 NM_000527.4(LDLR):c.1118G>A (p.Gly373Asp) LDLR Mar 30, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11111571 CCTGCAGCCAGCTCTGCGTGAACCTGGAGGGTGGCTACAAGTGCCAGTGTGAGGAAGGCTT 587777638 153751 NM_178172.5(GPIHBP1):c.194G>A (p.Cys65Tyr) GPIHBP1 Aug 01, 2012 MedGen:C4014767,OMIM:615947 Hyperlipoproteinemia, type ID germline 8 143215025 AGCCCGCCTTGTCCCCAGTGCTGCTGCGGTGCTACACCTGCAAGTCCCTGCCCAGGGACGA 104886180 35860 NM_000495.4(COL4A5):c.2423G>A (p.Gly808Glu) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108614938 AAGGTGATGTTGGACCAAATGGACAACCTGGACCAATGGGACCTCCTGGGCTGCCAGGAAT 121908891 21463 NM_003060.3(SLC22A5):c.1196G>A (p.Arg399Gln) SLC22A5 Dec 04, 2012 MedGen:C0342788,OMIM:212140,Orphanet:ORPHA158,SNOMED CT:21764004 Renal carnitine transport defect germline 5 132390833 TGGCCTGGCTGCTGCTGCAATATTTGCCCCGGCGCTATTCCATGGCCACTGCCCTCTTCCT 869312985 226851 NM_000048.3(ASL):c.175G>A (p.Glu59Lys) ASL Sep 09, 2016 MedGen:C0268547,OMIM:207900,Orphanet:ORPHA23,SNOMED CT:41013004;MedGen:CN517202 Argininosuccinate lyase deficiency;not provided germline 7 66081965 CTGGAGAAGGCAGGGCTCCTCACCAAGGCCGAGATGGACCAGATACTCCATGGCCTAGACA 118203942 15923 NM_000046.3(ARSB):c.284G>A (p.Arg95Gln) ARSB Jul 25, 2013 MedGen:C0026709,OMIM:253200,Orphanet:ORPHA583;MedGen:CN517202 Mucopolysaccharidosis type VI;not provided germline 5 78984965 ACTACACGCAGCCGCTGTGCACGCCGTCGCGGAGCCAGCTGCTCACTGGCCGCTACCAGGT 397514495 152034 NM_000546.5(TP53):c.542G>A (p.Arg181His) TP53 Oct 06, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0085390,Orphanet:ORPHA524,SNOMED CT:428850001;Gene:553989,MedGen:C1835398,OMIM:151623;MedGen:CN517202 Hereditary cancer-predisposing syndrome;Li-Fraumeni syndrome;Li-Fraumeni syndrome 1;not provided germline;unknown 17 7675070 AGGTTGTGAGGCGCTGCCCCCACCATGAGCGCTGCTCAGATAGCGATGGTGAGCAGCTGGG 63750579 33138 NM_000484.3(APP):c.2077G>A (p.Glu693Lys) APP Aug 01, 2010 MedGen:C2751536,OMIM:605714;MedGen:CN517202 Cerebral amyloid angiopathy, APP-related;not provided germline 21 25891856 TCTTAATTTGTTTTCAAGGTGTTCTTTGCAGAAGATGTGGGTTCAAACAAAGGTGCAATCA 81002897 24387 NM_000059.3(BRCA2):c.631+1G>A BRCA2 Aug 10, 2017 MedGen:C2675520,OMIM:612555;MedGen:C1838457,OMIM:605724,Orphanet:ORPHA319462;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 2;Fanconi anemia, complementation group D1;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome germline;unknown 13 32326614 CACCCACCCTTAGTTCTACTGTGCTCATAGGTAATAATAGCAAATGTGTATTTACAAGAAA -1 485720 NM_001252634.1(THRB):c.1031G>A (p.Gly344Glu) THRB Feb 24, 2012 MedGen:C2937288,OMIM:188570 Thyroid hormone resistance, generalized, autosomal dominant germline 3 24127612 TGGCAGTGACACGGGGCCAGCTGAAAAATGGGGGTCTTGGGGTGGTGTCAGACGCCATCTT 778906552 195186 NM_000016.5(ACADM):c.443G>A (p.Arg148Lys) ACADM Oct 26, 2017 MedGen:C0220710,OMIM:201450,Orphanet:ORPHA42,SNOMED CT:128596003;MedGen:CN517202 Medium-chain acyl-coenzyme A dehydrogenase deficiency;not provided germline;unknown 1 75734846 ATGATCAACAAAAGAAGAAGTATTTGGGGAGAATGACTGAGGAGCCATTGATGTGTGTGAG 146150511 59491 NM_002900.2(RBP3):c.3238G>A (p.Asp1080Asn) RBP3 Jun 27, 2013 MedGen:C3715216,OMIM:615233 Retinitis pigmentosa 66 germline 10 47353508 AAGATCATGCACACGGATGCCATGATCATCGACATGAGGTCAGTGGCCAGGGGTCAGTGCT 137852885 17838 NM_032520.4(GNPTG):c.316G>A (p.Gly106Ser) GNPTG Jul 05, 2012 MedGen:C1854896,OMIM:252605,Orphanet:ORPHA423470 Mucolipidosis III Gamma germline 16 1361954 TTCCGCTGGAACGCCTACAGTGGGATCCTCGGGTGAGTGGGGCCGGGGCAGGGATCCCAAA 119463995 18252 NM_001079802.1(FKTN):c.340G>A (p.Ala114Thr) FKTN May 01, 2009 MedGen:C1969040,OMIM:611588,Orphanet:ORPHA206554 Limb-girdle muscular dystrophy-dystroglycanopathy, type C4 germline 9 105601319 TTCTGTGTTCCAAGAGACTTTACTGCATTTGCACTGCAGTATCACCTATGGAAGAATGAGG 864309643 200391 NM_015340.3(LARS2):c.1912G>A (p.Glu638Lys) LARS2 Dec 10, 2015 MedGen:C3809105,OMIM:615300;MedGen:C3809105,OMIM:615300 Perrault syndrome 4;Perrault syndrome 4 germline 3 45516144 AAAACGAAAGAGAAGTTAGAGGTGACGTGGGAGAAGATGAGTAAGTCCAAACACAACGGGG 63750391 33176 NM_000021.3(PSEN1):c.438G>A (p.Met146Ile) PSEN1 Mar 01, 1998 MedGen:C1843013,OMIM:607822 Alzheimer disease, type 3 germline 14 73173665 TGCCATCATGATCAGTGTCATTGTTGTCATGACTATCCTCCTGGTGGTTCTGTATAAATAC 201553266 237087 NM_001271208.1(NEB):c.19944G>A (p.Ser6648=) NEB Aug 07, 2017 MedGen:C1850569,OMIM:256030;MedGen:CN517202 Nemaline myopathy 2;not provided germline 2 151551738 GGCCCTTCATGCATACAAGCTCCAGAGTTCGGTGAGCAGTGAGAACTTGAGAGTGCCCAGC 119458971 17634 NM_000126.3(ETFA):c.346G>A (p.Gly116Arg) ETFA Nov 01, 1992 MedGen:C3278154 Glutaric acidemia IIA germline 15 76292436 ACACACATCTGTGCTGGAGCATCTGCCTTCGGAAAGGTGAGAAGGTTGAGAATGTGGAATC 771721648 444076 NM_000083.2(CLCN1):c.2596-1G>A CLCN1 Jan 05, 2016 MedGen:CN517202 not provided germline 7 143351593 TACCCTCTTTTCCTTTCCCACTGCTCTTCAGCTACAGAAGGCCATTGAGGGGCACACCAAG 1057518149 359965 NM_003482.3(KMT2D):c.8366+1G>A KMT2D Oct 10, 2016 MedGen:CN517202 not provided germline 12 49039221 CACGCCTTCCTCTATGGATGTGAACAGCCGGTGAGGCTCCAGGAGGTTCCCTGGGGGTAAA 1060499531 206635 NM_033409.3(SLC52A3):c.1293G>A (p.Trp431Ter) SLC52A3 Mar 17, 2015 MedGen:CN029849,OMIM:211530 Brown-Vialetto-Van Laere syndrome 1 germline 20 761143 GCGCGACCTCAGCCGCAGCGCCCTCTTGTGGTGCGGGGCGGCGGTGCAGCTGGGCTCGCTG 80359814 31149 NM_006516.2(SLC2A1):c.272G>A (p.Gly91Asp) SLC2A1 Jun 01, 2001 MedGen:CN030711,OMIM:606777 GLUT1 deficiency syndrome 1 germline 1 42931049 TCTCTGTGGGCCTTTTCGTTAACCGCTTTGGCCGGTAAGTAGGAGAGGTCCTGGCACTGCC 104894317 18840 NM_000372.4(TYR):c.1336G>A (p.Gly446Ser) TYR Dec 09, 2015 MedGen:C0268494,OMIM:203100,Orphanet:ORPHA79431,SNOMED CT:6483008;MedGen:CN517202 Tyrosinase-negative oculocutaneous albinism;not provided germline 11 89284924 GGTGATTTCTTTATTTCATCCAAAGATCTGGGCTATGACTATAGCTATCTACAAGATTCAG 267607024 20433 NM_015713.4(RRM2B):c.362G>A (p.Arg121His) RRM2B Apr 17, 2014 MedGen:C3150172;MedGen:CN187502 Mitochondrial DNA depletion syndrome 8B (MNGIE type);RRM2B-related mitochondrial disease germline 8 102224978 TTAGTCAGGAGGTGCAGGTTCCAGAGGCTCGCTGTTTCTATGGCTTTCAAATTCTCATCGA 876657729 229706 NM_138691.2(TMC1):c.1677G>A (p.Trp559Ter) TMC1 Feb 12, 2015 MedGen:CN043648,Orphanet:ORPHA87884 Nonsyndromic hearing loss and deafness germline 9 72805492 TGTGAGGTTTTGCAATTATTGCTGGTGCTGGGACTTGGAGTATGGATATGTAAGTATGATG 121434473 24648 m.12183G>A MT-TH Apr 08, 2003 MedGen:CN069313 Pigmentary retinopathy and sensorineural deafness germline MT 12183 CCAAAACATCAGATTGTGAATCTGACAACAGAGGCTTACGACCCCTTATTTACCGAGAAAG 374664941 132024 NM_003638.2(ITGA8):c.1219G>A (p.Gly407Arg) ITGA8 Feb 06, 2014 MedGen:C1619700,OMIM:191830 Renal adysplasia germline 10 15644210 GTTTTATGTCTGTTTTTAGACATTGCCATCGGAGTGCCTTTTGCAGGCAAGGATCAAAGAG 140210148 65571 NM_052961.3(SLC26A8):c.260G>A (p.Arg87Gln) SLC26A8 May 02, 2013 Gene:338331,MedGen:C1847540,OMIM:606766 Spermatogenic failure 3 germline 6 36012301 TTCCCTTCCTAGAATGGATGTGTATGTATCGATTAAAGGATTGGCTTCTGGGAGACTTACT -1 480450 NM_000492.3(CFTR):c.3468+5G>A CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline 7 117614718 ACTCCAGCATAGATGTGGATAGCTTGGTAAGTCTTATCATCTTTTTAACTTTTATGAAAAA 121909190 23024 NM_000474.3(TWIST1):c.556G>A (p.Ala186Thr) TWIST1 Apr 01, 2007 MedGen:CN029978,OMIM:123100 Craniosynostosis 1 germline 7 19116766 AGCTATGTGGCTCACGAGCGGCTCAGCTACGCCTTCTCGGTCTGGAGGATGGAGGGGGCCT -1 482083 NM_001271.3(CHD2):c.1052G>A (p.Trp351Ter) CHD2 Nov 09, 2017 MedGen:CN517202 not provided germline 15 92943068 TCAAGAAAAAAGAGGACGAAATCAAACAATGGTATATTTTCCATCATGGATTAAAGAAATG 45517102 59226 NM_000548.4(TSC2):c.336+1G>A TSC2 Aug 23, 2016 MedGen:C1860707,OMIM:613254;MedGen:C0041341,Orphanet:ORPHA805,SNOMED CT:7199000 Tuberous sclerosis 2;Tuberous sclerosis syndrome germline 16 2053453 GCTCTGCTGAAGGCCATCGTGCAGGGGCAGGTAAGGCCCAGGGCGACGCTGGGATGGGTGA 104894576 20667 NM_000154.1(GALK1):c.94G>A (p.Val32Met) GALK1 Jul 01, 1995 MedGen:C0268155,OMIM:230200,Orphanet:ORPHA79237,SNOMED CT:124302001 Deficiency of galactokinase germline 17 75765043 GAGGAGTTCGGGGCCGAGCCCGAGCTGGCCGTGTCAGCGCCGGGCCGCGTCAACCTCATCG 794726744 187770 NM_001165963.1(SCN1A):c.3705+1G>A SCN1A Dec 20, 2014 MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002 Severe myoclonic epilepsy in infancy de novo 2 166013743 TTCATGATTCTCCTTAGTAGTGGTGCTCTGGTGAGTGAGATTAAGAAAAGGTGATACAGCA 587777592 152758 NM_020745.3(AARS2):c.1213G>A (p.Glu405Lys) AARS2 Jun 10, 2014 MedGen:C4014588,OMIM:615889 Leukoencephalopathy, progressive, with ovarian failure germline 6 44306367 GTTCAGATCGCCAACCTGGTGTCAGAGGACGAGGCAGCCTTCCTGGCCTCCCTGGAGCGGG 121909119 22418 NM_005506.3(SCARB2):c.533G>A (p.Trp178Ter) SCARB2 Mar 05, 2015 MedGen:C0751779,OMIM:254900,Orphanet:ORPHA163696 Epilepsy, progressive myoclonic 4, with or without renal failure germline 4 76179596 TTGTGACTCACACAGTTGACGAATTGCTCTGGGGCTACAAAGATGAAATCTTGTCCCTTAT 886041187 264137 NM_000094.3(COL7A1):c.3140-1G>A COL7A1 Jan 10, 2017 MedGen:CN517202 not provided germline 3 48587109 CCGCTTCAGTAACTTGTTCCCCTTCCTACAGTGTGCCCCCGTGGCCTGGCGGATGTGGTGT 207460003 24723 m.15498G>A MT-CYB Sep 01, 2000 MedGen:C1708371,OMIM:500000,Orphanet:ORPHA137675 Infantile histiocytoid cardiomyopathy germline MT 15498 CATTAACACTATTCTCACCAGACCTCCTAGGCGACCCAGACAATTATACCCTAGCCAACCC 121912444 29804 NM_000454.4(SOD1):c.13G>A (p.Ala5Thr) SOD1 Mar 09, 2017 MedGen:C1862939,OMIM:105400;MedGen:CN517202 Amyotrophic lateral sclerosis type 1;not provided germline 21 31659782 GGCGTGGCCTAGCGAGTTATGGCGACGAAGGCCGTGTGCGTGCTGAAGGGCGACGGCCCAG 786204707 186713 NM_138694.3(PKHD1):c.2810G>A (p.Trp937Ter) PKHD1 Dec 29, 2014 MedGen:C0085548,OMIM:263200,Orphanet:ORPHA731,SNOMED CT:28770003;Human Phenotype Ontology:HP:0000113,MedGen:C0022680;Human Phenotype Ontology:HP:0000107,MedGen:C0022679;Human Phenotype Ontology:HP:0001714,MedGen:C0340279 Autosomal recessive polycystic kidney disease;Polycystic kidney dysplasia;Renal cyst;Ventricular hypertrophy unknown 6 52043636 AAGGGTCAACTCCCTGTGTCCATTCTGTGTGGTACTCCATTGGTATGATTTGTCACTTGGC 371963034 429637 NM_000275.2(OCA2):c.1182+1G>A OCA2 Apr 14, 2017 MedGen:C0268495,OMIM:203200,Orphanet:ORPHA79432,SNOMED CT:26336006 Tyrosinase-positive oculocutaneous albinism germline 15 27989600 TTTGAGACGCTGGCCCTGCTGTTTGGCATGGTAATTACAGCTCTCCCCGTGGGACTGGGCT 104894214 22336 NM_001814.5(CTSC):c.901G>A (p.Gly301Ser) CTSC Feb 01, 2001 MedGen:C0030360,OMIM:245000,Orphanet:ORPHA678,SNOMED CT:40158001 Papillon-Lefèvre syndrome germline 11 88294497 GTGTGTTATTCATCTTCAGGCTGTGAAGGCGGCTTCCCATACCTTATTGCAGGAAAGTACG 104893614 24514 NM_001298.2(CNGA3):c.848G>A (p.Arg283Gln) CNGA3 Jul 01, 1998 MedGen:C1857618,OMIM:216900 Achromatopsia 2 germline 2 98396018 TGAGGTTCAACCGCCTACTGAAGTTTTCCCGGCTCTTTGAATTCTTTGACCGCACAGAGAC -1 445010 NM_001844.4(COL2A1):c.1268G>A (p.Gly423Asp) COL2A1 Oct 30, 2017 MedGen:CN517202 not provided germline 12 47987175 ACACCCCTCCCTTCTTCTCATGCCCACAGGGTGCTCCTGGCATTGCTGGTGCTCCTGGCTT 397517003 54205 NM_004572.3(PKP2):c.1688+1G>A PKP2 May 30, 2017 MedGen:C0349788,Orphanet:ORPHA247,SNOMED CT:253528005,SNOMED CT:281170005;MedGen:CN517202 Arrhythmogenic right ventricular cardiomyopathy;not provided germline 12 32841027 CATATTCTACAACGTCACTGGATGCCTAAGGTAATGCTACCTGTACCCTGCCCTGATAGAA 121912924 32265 NM_000090.3(COL3A1):c.3302G>A (p.Gly1101Glu) COL3A1 Dec 01, 1996 MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189007546 GTGGTGACAAAGGTGAAACAGGTGAACGTGGAGCTGCTGGCATCAAAGGACATCGAGGATT 377767342 36164 NM_005359.5(SMAD4):c.988G>A (p.Glu330Lys) SMAD4 Dec 04, 2012 na JP and JP/HHT not provided 18 51065455 CCTGAGTATTGGTGTTCCATTGCTTACTTTGAAATGGATGTTCAGGTAGGAGAGACATTTA 121907947 18984 NM_000062.2(SERPING1):c.1372G>A (p.Ala458Thr) SERPING1 Aug 01, 1992 MedGen:C1862892,Orphanet:ORPHA100051,SNOMED CT:234620006 Hereditary C1 esterase inhibitor deficiency - dysfunctional factor germline 11 57614450 GAACTGACAGAGACTGGGGTGGAGGCGGCTGCAGCCTCCGCCATCTCTGTGGCCCGCACCC 368124046 208172 NM_000275.2(OCA2):c.1503+5G>A OCA2 Oct 05, 2016 MedGen:C0268495,OMIM:203200,Orphanet:ORPHA79432,SNOMED CT:26336006;MedGen:CN517202 Tyrosinase-positive oculocutaneous albinism;not provided germline 15 27983340 TTTCCAACCAAGAGCTGAGGAAGATGGTACGTACCAGCATGCTAGGGTTGCTTCCAGTAAA 121909123 99447 NM_001083962.1(TCF4):c.1733G>A (p.Arg578His) TCF4 Apr 28, 2017 MedGen:C1970431,OMIM:610954,Orphanet:ORPHA2896;MedGen:CN517202 Pitt-Hopkins syndrome;not provided de novo;germline 18 55228993 AGCGGAGGATGGCCAACAATGCCCGAGAGCGTCTGCGGGTCCGTGACATCAACGAGGCTTT 199476203 47860 NM_207352.3(CYP4V2):c.1199G>A (p.Arg400His) CYP4V2 Apr 12, 2012 MedGen:C1859486,OMIM:210370,Orphanet:ORPHA41751 Bietti crystalline corneoretinal dystrophy not provided 4 186208973 GCCTTTTTCCTTCTGTTCCTTTATTTGCCCGTAGTGTTAGTGAAGATTGTGAAGTGGGTAA 121912606 17030 NM_182896.2(ARL13B):c.236G>A (p.Arg79Gln) ARL13B Aug 01, 2008 MedGen:C2676771,OMIM:612291 Joubert syndrome 8 germline 3 94003764 TCTTTGACTTGGGAGGTGGAATAAGAATTCGGGGAATCTGGAAGAATTACTATGCTGAATC 28940271 17897 NM_173076.2(ABCA12):c.4615G>A (p.Glu1539Lys) ABCA12 Sep 15, 2003 MedGen:C1832550,OMIM:601277 Autosomal recessive congenital ichthyosis 4A germline 2 214980608 ACAATCATTCTGTCAACGCACCACTTGGACGAGGCTGAAGTGCTGAGTGACCGCATCGCCT 28937875 20350 NM_170784.2(MKKS):c.155G>A (p.Gly52Asp) MKKS Feb 12, 2018 MedGen:C1858054,OMIM:605231 Bardet-Biedl syndrome 6 germline 20 10413360 GGCTGAAGCAGCTGCACAATGGCTTTGGAGGTTACGTGTGTACAACCTCACAGTCCTCAGC 886037724 248822 NM_177438.2(DICER1):c.5123G>A (p.Gly1708Glu) DICER1 Nov 10, 2014 MedGen:CN072455,OMIM:601200 DICER1-related pleuropulmonary blastoma cancer predisposition syndrome germline 14 95094129 CAGATTGTTACCAGCGCTTAGAATTCCTGGGAGATGCGATTTTGGACTACCTCATAACCAA 606231253 167357 NM_005228.4(EGFR):c.1283G>A (p.Gly428Asp) EGFR Oct 01, 2014 MedGen:C4015130,OMIM:616069 Inflammatory skin and bowel disease, neonatal, 2 germline 7 55157738 ATGCCTTTGAGAACCTAGAAATCATACGCGGCAGGACCAAGCAACAGTAAGTTGACCACAG 137852449 25335 NM_000132.3(F8):c.5882G>A (p.Trp1961Ter) F8 Dec 01, 1993 MedGen:C0019069,OMIM:306700,SNOMED CT:28293008 Hereditary factor VIII deficiency disease germline X 154904022 TAGTAATGGCTCAGGATCAAAGGATTCGATGGTATCTGCTCAGCATGGGCAGCAATGAAAA 1131691686 421939 NM_000020.2(ACVRL1):c.1135G>A (p.Glu379Lys) ACVRL1 Feb 03, 2017 MedGen:C1838163,OMIM:600376;MedGen:CN517202 Hereditary hemorrhagic telangiectasia type 2;not provided germline 12 51916122 AGAGTGGGCACCAAGCGGTACATGGCACCCGAGGTGCTGGACGAGCAGATCCGCACGGACT 113994093 34171 NM_002693.2(POLG):c.695G>A (p.Arg232His) POLG Nov 17, 2016 MedGen:C0751651,Orphanet:ORPHA68380;MedGen:CN517202 Mitochondrial diseases;not provided germline 15 89330241 CCTGGTGCAGCCAGCGGCTGGTGGAAGAGCGTTACTCTTGGACCAGCCAGCTGTCGCCGGC 587776612 19806 NM_014795.3(ZEB2):c.-69-1G>A ZEB2 Apr 15, 2008 MedGen:C1856113,OMIM:235730,Orphanet:ORPHA2152 Mowat-Wilson syndrome germline 2 144517420 TGCCCACATTGTCGCTGTGTTTGGTTGCTAGATCGAGCCTGCGTGCTGCCGAAGCAGGGCG 72658182 441158 NM_000089.3(COL1A2):c.2296G>A (p.Gly766Ser) COL1A2 Feb 07, 2017 MedGen:CN517202 not provided germline 7 94421009 ATTTGACTCCATCTTTTTGTTTGCATTTAGGGTCCAAATGGTCCCCCCGGTCCTGCTGGAA 397514419 36418 NM_000060.4(BTD):c.1352G>A (p.Gly451Asp) BTD Dec 04, 2012 MedGen:C0220754,OMIM:253260,Orphanet:ORPHA79241,SNOMED CT:8808004 Biotinidase deficiency not provided 3 15645208 GGGTCTTTGATGGGCTTCACACAGTACATGGCACTTACTACATCCAAGTGTGTGCCCTGGT 397515810 51533 NM_000138.4(FBN1):c.4505G>A (p.Cys1502Tyr) FBN1 Jun 19, 2017 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:CN118826,Orphanet:ORPHA91387 Marfan syndrome;Marfan syndrome;Thoracic aortic aneurysm and aortic dissection germline 15 48468489 TGGATCCAACCACGTGCATCAGTGGGAACTGTGTCAACACTCCAGGCAGCTATATCTGTGA 794727534 193786 NM_003494.3(DYSF):c.3230G>A (p.Trp1077Ter) DYSF Nov 20, 2014 MedGen:C1850889,OMIM:253601,Orphanet:ORPHA268;MedGen:C1850808,OMIM:254130,Orphanet:ORPHA45448 Limb-girdle muscular dystrophy, type 2B;Miyoshi muscular dystrophy 1 germline 2 71574253 AGGGCTGGGAGTACGCCTCTCTTTTTGGCTGGAAGTTCCACCTCGAGTACCGCAAGACAGA 67729041 413954 NM_000089.3(COL1A2):c.992G>A (p.Gly331Asp) COL1A2 - MedGen:C0268362,OMIM:259420,Orphanet:ORPHA216812,SNOMED CT:385483009 Osteogenesis imperfecta type III unknown 7 94409778 CCGGCCTCCCTGGACCCCGCGGTATTCCTGGCCCTGTTGGTGCTGCCGGTGCTACTGGTGC 886044475 274756 NM_000070.2(CAPN3):c.2263+1G>A CAPN3 Sep 23, 2016 MedGen:C1869123,OMIM:253600,Orphanet:ORPHA267 Limb-girdle muscular dystrophy, type 2A germline 15 42410667 ACGAGATGCGAAATGCAGTCAACGACGCAGGTGCTGAGAAGGAAGGGGTGGCAGGGATGTG 386834078 71294 NM_017890.4(VPS13B):c.2889G>A (p.Trp963Ter) VPS13B May 05, 2016 MedGen:C0265223,OMIM:216550,Orphanet:ORPHA193,SNOMED CT:56604005;MedGen:CN517202 Cohen syndrome;not provided germline;unknown 8 99384272 AGTTAATATTGACCCAATCTTATATACGTGGCTCATCTATCAGCCTCAGAAACGAACAAGT 121909752 31079 NM_000407.4(GP1BB):c.137G>A (p.Trp46Ter) GP1BB Jul 15, 2000 MedGen:C1856447 Bernard-Soulier syndrome, type B germline 22 19723980 TCGTGGACTGCGGGCGCCGCGGGCTGACTTGGGCCTCGCTGCCGACCGCCTTCCCTGTCGA 387906725 38940 NM_000194.2(HPRT1):c.143G>A (p.Arg48His) HPRT1 Jan 01, 2011 MedGen:C1845893;MedGen:C0268117,OMIM:300323,Orphanet:ORPHA79233,SNOMED CT:238007004 Lesch-nyhan syndrome, neurologic variant;Partial hypoxanthine-guanine phosphoribosyltransferase deficiency germline X 134475189 ATTCCTGATTTTATTTCTGTAGGACTGAACGTCTTGCTCGAGATGTGATGAAGGAGATGGG 63750624 96580 NM_000251.2(MSH2):c.484G>A (p.Gly162Arg) MSH2 Jul 05, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0009405,Orphanet:ORPHA443090;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Hereditary cancer-predisposing syndrome;Hereditary nonpolyposis colon cancer;Lynch syndrome germline 2 47410211 ATGTCCGCAGTTGATGGCCAGAGACAGGTTGGAGTTGGGTATGTGGATTCCATACAGAGGA 886044338 274305 NM_016239.3(MYO15A):c.6178-1G>A MYO15A Sep 08, 2016 MedGen:C1838263,OMIM:600316 Deafness, autosomal recessive 3 germline 17 18144496 TGTCTGCTCATGTGCCTGCCCTGTGTCTTAGGAACCTGCCTTTGGGATGCTGACAGTGCCC 690016566 171841 NM_005211.3(CSF1R):c.2294G>A (p.Gly765Asp) CSF1R Dec 18, 2014 Gene:8156,MedGen:C1857300,OMIM:221820 Hereditary diffuse leukoencephalopathy with spheroids germline 5 150057312 TGCTTCACTTCTCCAGCCAAGTAGCCCAGGGCATGGCCTTCCTCGCTTCCAAGAATGTGAG -1 482106 NM_016373.3(WWOX):c.132G>A (p.Trp44Ter) WWOX Dec 05, 2017 MedGen:CN517202 not provided germline 16 78108447 TAACAGTCACACCGAGGAGAAGACTCAGTGGGAACATCCAAAAACTGGAAAAAGAAAACGA 879255271 227683 NM_001136139.2(TCF3):c.1663G>A (p.Glu555Lys) TCF3 Aug 21, 2017 MedGen:C4310786,OMIM:616941 Agammaglobulinemia 8, autosomal dominant germline 19 1612357 CGGGAGAGGCGCATGGCCAATAACGCGCGGGAGCGGGTGCGCGTGCGGGATATTAACGAGG 80359080 67232 NM_000059.3(BRCA2):c.8363G>A (p.Trp2788Ter) BRCA2 Sep 08, 2016 MedGen:C2675520,OMIM:612555 Breast-ovarian cancer, familial 2 germline 13 32370433 TTTCTGCTAACAGTACTCGGCCTGCTCGCTGGTATACCAAACTTGGATTCTTTCCTGACCC 104894507 33337 NM_000485.2(APRT):c.294G>A (p.Trp98Ter) APRT Jun 18, 2015 MedGen:C0268120,OMIM:614723 Adenine phosphoribosyltransferase deficiency germline 16 88810450 GCGGGGGAAGCTGCCAGGCCCCACTCTGTGGGCCTCCTATTCCCTGGAGTACGGGAAGGTA 397514396 36390 NM_000060.4(BTD):c.934G>A (p.Gly312Ser) BTD Dec 04, 2012 MedGen:C0220754,OMIM:253260,Orphanet:ORPHA79241,SNOMED CT:8808004 Biotinidase deficiency not provided 3 15644790 CACCACCCAGTTCTGGGGATGACAGGAAGTGGCATACACACCCCTCTGGAGTCCTTTTGGT 74315455 18092 NM_000487.5(ARSA):c.302G>A (p.Gly101Asp) ARSA Feb 03, 2015 MedGen:C0023522,OMIM:250100,Orphanet:ORPHA512,SNOMED CT:396338004;MedGen:C0751279,Orphanet:ORPHA309271,SNOMED CT:24326000 Metachromatic leukodystrophy;Metachromatic leukodystrophy, adult type germline;unknown 22 50627329 CTGGCGTCCTGGTGCCCAGCTCCCGGGGGGGCCTGCCCCTGGAGGAGGTGACCGTGGCCGA 587777546 150146 NM_001177701.2(IFT27):c.299G>A (p.Cys100Tyr) IFT27 Jun 15, 2014 MedGen:C3889475,OMIM:615996 Bardet-Biedl syndrome 19 germline 22 36763972 ATGTGACCAATGAAGAATCCTTCAACAACTGCAGCAAGTGGCTGGAGAAGGCTCGGTCACA 730880026 178366 NM_006000.2(TUBA4A):c.959G>A (p.Arg320His) TUBA4A Oct 22, 2014 MedGen:C4015512,OMIM:616208 Amyotrophic lateral sclerosis 22 with or without frontotemporal dementia germline 2 219250740 GCAAGTACATGGCCTGCTGCCTGCTGTACCGTGGAGATGTGGTGCCCAAGGATGTCAACGC 375072557 178869 NM_173689.6(CRB2):c.2277G>A (p.Trp759Ter) CRB2 Jan 08, 2015 MedGen:C1857423,OMIM:219730,Orphanet:ORPHA443988 Ventriculomegaly with cystic kidney disease germline 9 123371419 GAGGCTCCTTGCTGCCGACAGCCAGCCCTGGGGTGGGCCCTTCCGAGGCTGCCTCCAGGAC 587782272 151875 NM_000546.5(TP53):c.994-1G>A TP53 Mar 02, 2013 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 17 7670716 ACTTACTTCTCCCCCTCCTCTGTTGCTGCAGATCCGTGGGCGTGAGCGCTTCGAGATGTTC 377767428 36299 NM_020630.4(RET):c.2647G>A (p.Ala883Thr) RET Dec 04, 2012 MedGen:CN076152 MEN2 phenotype: Unclassified not provided 10 43120120 CGGGACTTGGCAGCCAGAAACATCCTGGTAGCTGAGGGGCGGAAGATGAAGATTTCGGATT 281865358 104891 NM_000330.3(RS1):c.599G>A (p.Arg200His) RS1 Jan 14, 2016 MedGen:CN517202 not provided germline X 18642080 TGCGGCCCCCCATCATCTCCCGCTTCATCCGCCTCATCCCGCTGGGCTGGCACGTCCGCAT 118203886 24613 m.611G>A MT-TF Jan 29, 2015 MedGen:C0162672,OMIM:545000,Orphanet:ORPHA551 Myoclonus with epilepsy with ragged red fibers germline MT 611 ATGTAGCTTACCTCCTCAAAGCAATACACTGAAAATGTTTAGACGGGCTCACATCACCCCA 747291494 245008 NM_022041.3(GAN):c.851+1G>A GAN Aug 08, 2017 MedGen:C1850386,OMIM:256850,Orphanet:ORPHA643,SNOMED CT:128207002;MedGen:CN517202;MedGen:CN169374 Giant axonal neuropathy;not provided;not specified germline 16 81357003 CATCGTGACTGTTGGTGGAGAAGAGAGAGTGTAAGTATGAGGTGGGACTTGTTTGAAAAGT 121913614 29202 NM_005373.2(MPL):c.1514G>A (p.Ser505Asn) MPL Oct 02, 2014 MeSH:D013920,MedGen:C0040028,OMIM:187950,Orphanet:ORPHA3318;Human Phenotype Ontology:HP:0011974,MeSH:D055728,MedGen:C0001815,OMIM:254450;MedGen:C1292778;MedGen:C1865987,OMIM:601977 Essential thrombocythemia;Myelofibrosis;Myeloproliferative Neoplasm;Thrombocytosis, benign familial microcytic germline;somatic 1 43349308 TGACCGCTCTGCATCTAGTGCTGGGCCTCAGCGCCGTCCTGGGCCTGCTGCTGCTGAGGTG 3218716 52071 NM_000257.3(MYH7):c.2389G>A (p.Ala797Thr) MYH7 Jul 18, 2017 MedGen:C0546264,OMIM:255310,Orphanet:ORPHA2020,SNOMED CT:240084007;MedGen:C1834481,OMIM:613426;MedGen:C3495498,OMIM:192600;MedGen:C3495498,OMIM:192600;Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569;MedGen:CN074249,OMIM:160500,Orphanet:ORPHA59135;Gene:619511,MedGen:C1850709,OMIM:255160;MedGen:C1842160,OMIM:608358,SNOMED CT:699267007;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;Gene:8090,MedGen:CN074265,OMIM:181430,Orphanet:ORPHA437572;MedGen:CN517202 Congenital myopathy with fiber type disproportion;Dilated cardiomyopathy 1S;Familial hypertrophic cardiomyopathy 1;Familial hypertrophic cardiomyopathy 1;Hypertrophic cardiomyopathy;Myopathy, distal, 1;Myopathy, myosin storage, autosomal recessive;Myosin storage myopathy;Primary familial hypertrophic cardiomyopathy;Scapuloperoneal myopathy, MYH7-related;not provided germline;inherited;unknown 14 23425316 CGTATCCAGGCCCAGTCCCGAGGTGTGCTCGCCAGAATGGAGTACAAAAAGCTGCTGGAAC 121918444 28592 NM_000212.2(ITGB3):c.719G>A (p.Arg240Gln) ITGB3 Feb 25, 1992 MedGen:C0040015,OMIM:273800,Orphanet:ORPHA849,SNOMED CT:32942005 Glanzmann thrombasthenia germline 17 47286364 ATGAGGAAGTGAAGAAGCAGAGTGTGTCACGGAACCGAGATGCCCCAGAGGGTGGCTTTGA 121964997 26996 NM_000191.2(HMGCL):c.122G>A (p.Arg41Gln) HMGCL Jan 18, 2013 MedGen:C0268601,OMIM:246450,SNOMED CT:124611007;MedGen:CN517202 Deficiency of hydroxymethylglutaryl-CoA lyase;not provided germline 1 23820532 AGCGGGTGAAAATTGTGGAAGTTGGTCCCCGAGATGGACTACAAAATGAAAAGGTAAAGTT 121913113 31394 NM_000142.4(FGFR3):c.1862G>A (p.Arg621His) FGFR3 Nov 01, 2006 MedGen:C1864852,OMIM:610474,Orphanet:ORPHA85164 Camptodactyly, tall stature, and hearing loss syndrome germline 4 1806076 CCCAGTGCATCCACAGGGACCTGGCTGCCCGCAATGTGCTGGTGACCGAGGACAACGTGAT 879254093 244585 NM_000051.3(ATM):c.1463G>A (p.Trp488Ter) ATM Apr 18, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:CN517202 Ataxia-telangiectasia syndrome;not provided germline 11 108250928 CAGATTTATTAAAACTCTGGAATAAAATTTGGTGTATTACCTTTCGTGGTATAAGTTCTGA 587784281 169366 NM_000430.3(PAFAH1B1):c.671G>A (p.Gly224Asp) PAFAH1B1 Feb 08, 2013 MedGen:C1843916,OMIM:607432 Lissencephaly 1 germline 17 2672757 AAACTATAAAAATGTGGGAAGTGCAAACTGGGTAAGTAAGTTTAGTTGAAAAGGCATCAGC 61750173 24396 NM_000180.3(GUCY2D):c.2513G>A (p.Arg838His) GUCY2D Dec 07, 2017 MedGen:C1866293,OMIM:601777;Human Phenotype Ontology:HP:0000556,MedGen:C0854723,Orphanet:ORPHA71862,SNOMED CT:314407005;MedGen:CN517202 Cone-rod dystrophy 6;Retinal dystrophy;not provided germline;unknown 17 8014701 CTAGTAACCTGGAGGATCTGATCCGGGAGCGCACGGAGGAGCTGGAGCTGGAAAAGCAGAA -1 438554 NM_018890.3(RAC1):c.527G>A (p.Cys176Tyr) RAC1 Oct 31, 2017 MedGen:CN580791,OMIM:617751;MedGen:CN517202 MENTAL RETARDATION, AUTOSOMAL DOMINANT 48;not provided germline 7 6402337 TTCCTGTAGGTGCTGTAAAATACCTGGAGTGCTCGGCGCTCACACAGCGAGGCCTCAAGAC 147879266 27697 NM_003319.4(TTN):c.13250G>A (p.Ser4417Asn) TTN Feb 22, 2002 MedGen:C1858763,OMIM:604145 Dilated cardiomyopathy 1G germline 2 178738114 ATACATGCAAAGCTTCCAATGAGTATGGCAGTGTCAGCTGTACAGCCACACTAACTGTGAC 397508070 67605 NM_000218.2(KCNQ1):c.1032+1G>A KCNQ1 Jul 12, 2013 MeSH:D008133,MedGen:C0023976,SNOMED CT:9651007;MedGen:CN517202 Long QT syndrome;not provided germline 11 2583546 TTTGCCATCTCCTTCTTTGCGCTCCCAGCGGTAGGTGCCCCGTGGGTGCGTTTTCCCTGGC 137854469 31483 NM_000138.4(FBN1):c.3668G>A (p.Cys1223Tyr) FBN1 Nov 09, 2012 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:CN118826,Orphanet:ORPHA91387 Marfan syndrome;Thoracic aortic aneurysm and aortic dissection germline 15 48485418 CAAACTCTGAAGGCAGCTATGAATGTAGCTGTCAGCCGGGATTTGCACTAATGCCTGACCA 879254280 244339 NM_000465.3(BARD1):c.102G>A (p.Trp34Ter) BARD1 Apr 11, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Hereditary cancer-predisposing syndrome;not provided germline 2 214809468 CGCCATGGAACCGGATGGTCGCGGTGCCTGGGCCCACAGTCGCGCCGCGCTCGACCGCCTG 28931593 32066 NM_004004.5(GJB2):c.224G>A (p.Arg75Gln) GJB2 Dec 22, 2016 MedGen:C2675750,OMIM:601544;MedGen:C2673759,OMIM:220290;MedGen:C1835672,OMIM:148350,Orphanet:ORPHA2202;MedGen:CN043648,Orphanet:ORPHA87884;MedGen:CN517202 Deafness, autosomal dominant 3a;Deafness, autosomal recessive 1A;Keratoderma palmoplantar deafness;Nonsyndromic hearing loss and deafness;not provided germline;inherited 13 20189358 ACGATCACTACTTCCCCATCTCCCACATCCGGCTATGGGCCCTGCAGCTGATCTTCGTGTC 137852902 17639 NM_058172.5(ANTXR2):c.314G>A (p.Gly105Asp) ANTXR2 Oct 01, 2003 MedGen:C2745948,OMIM:228600,SNOMED CT:238861002,SNOMED CT:238867003 Hyaline fibromatosis syndrome germline 4 80055996 ATATTATTTTCAGAGGCAAAATCAGTAAAGGCTTGGAGGATTTAAAACGTGTTAGTCCAGT 58619430 77145 NM_000424.3(KRT5):c.502G>A (p.Glu168Lys) KRT5 Aug 10, 2016 MedGen:CN517202 not provided germline 12 52519795 GACCCCAGCATCCAGAGGGTGAGGACCGAGGAGCGCGAGCAGATCAAGACCCTCAACAATA 1057519696 362765 NM_004304.4(ALK):c.3673G>A (p.Asp1225Asn) ALK Oct 02, 2014 Human Phenotype Ontology:HP:0002859,MeSH:D012208,MedGen:C0035412,Orphanet:ORPHA780 Rhabdomyosarcoma somatic 2 29214054 CAGAGCCAGCCCTCCTCCCTGGCCATGCTGGACCTTCTGCACGTGGCTCGGGACATTGCCT 121909505 33407 NM_000751.2(CHRND):c.234G>A (p.Trp78Ter) CHRND Feb 01, 2008 MedGen:C1854678,OMIM:253290,Orphanet:ORPHA33108,SNOMED CT:60192008 Lethal multiple pterygium syndrome germline 2 232527436 AGTTGAGGAGACCCTCACTACCAATGTGTGGATAGAGCACGTAAGAATGCCCCTCCCAGCC -1 432336 NM_000088.3(COL1A1):c.1929+1G>A COL1A1 Apr 20, 2017 MedGen:C0023931,OMIM:166200,SNOMED CT:385482004 Osteogenesis imperfecta type I germline 17 50192639 CAAGGCCCTGCTGGCTCCCCCGGATTCCAGGTGAGGCCTCATGGCTGTCAGGATGCTGGGA 121908943 21779 NM_006892.3(DNMT3B):c.1807G>A (p.Ala603Thr) DNMT3B Oct 29, 1999 MedGen:C0398788,OMIM:242860,SNOMED CT:234633000 Centromeric instability of chromosomes 1,9 and 16 and immunodeficiency germline 20 32800200 GAGTTGGGCATAAAGGTAGGAAAGTACGTCGCTTCTGAAGTGTGTGAGGAGTCCATTGCTG 398123455 99119 NM_000528.3(MAN2B1):c.1929G>A (p.Trp643Ter) MAN2B1 Mar 13, 2013 MedGen:CN517202 not provided germline 19 12652270 TTACCTGACTCTCACCTGCCCCAACTCCAGGTACAACGCCAGTATAGGTGACAACGAAAGT 201728138 481567 NM_002016.1(FLG):c.977G>A (p.Trp326Ter) FLG Nov 02, 2017 MedGen:CN517202 not provided germline 1 152313909 CGGCTTCCAGAAACCATCATGGATCTGCGTGGGAGCAGTCAAGAGATGGCTCCAGACACCC -1 433004 NM_001127510.2(APC):c.532-1G>A APC Jan 13, 2017 MedGen:CN169374 not specified germline 5 112780789 ATTGATACTTTTTTATTATTTGTGGTTTTAGTTTTCCTTACAAACAGATATGACCAGAAGG 587776773 27709 NM_002734.4(PRKAR1A):c.-7+1G>A PRKAR1A Sep 01, 2002 MedGen:C1864846,OMIM:610489 Pigmented nodular adrenocortical disease, primary, 1 unknown 17 68512549 AGCCTCGCGCCCGCCGCCGCCCGTCCCCAGGTGAGTGGGGTCGGCCGGGGGCTCAGGCGAG 886039584 260301 NM_000444.5(PHEX):c.1209G>A (p.Trp403Ter) PHEX Jul 14, 2016 MedGen:CN517202 not provided germline X 22114493 CCAGGGGACCACAACTTTGCTGCCTCAATGGGACAAATGTGTAAACTTTATTGAAAGTGCC 1131691732 421192 NM_024529.4(CDC73):c.423+1G>A CDC73 Sep 25, 2015 MedGen:CN517202 not provided germline 1 193135590 TTAGCAGAAGCAAAGAAACCACGAATTGAGGTAAAGAAACTGTATTTTAAACAATTTTATT 118204006 16250 NM_000429.2(MAT1A):c.1006G>A (p.Gly336Arg) MAT1A Feb 01, 2000 MedGen:C0268621,OMIM:250850,Orphanet:ORPHA168598,SNOMED CT:57835009 Hepatic methionine adenosyltransferase deficiency germline 10 80274599 GAGCCGCTGTCCATTTCCATCTTCACCTACGGAACCTCTCAGAAGACAGAGCGAGAGCTGC 121909329 23507 NM_007126.4(VCP):c.464G>A (p.Arg155His) VCP May 04, 2017 MedGen:C3152097;MedGen:C3151403,OMIM:613954;MedGen:C1833662,OMIM:167320,Orphanet:ORPHA52430;MedGen:C1833662,OMIM:167320,Orphanet:ORPHA52430;MedGen:CN517202 Amyotrophic lateral sclerosis 14 without frontotemporal dementia;Amyotrophic lateral sclerosis 14, with or without frontotemporal dementia;Inclusion body myopathy with early-onset paget disease and frontotemporal dementia;Inclusion body myopathy with early-onset paget disease and frontotemporal dementia;not provided germline 9 35065363 TTGCTCTCGCAGGAGACATTTTTCTTGTCCGTGGTGGGATGCGTGCTGTGGAGTTCAAAGT 376595844 19676 NM_052985.3(IFT122):c.502+5G>A IFT122 Sep 12, 2013 MedGen:C0432235,OMIM:218330 Cranioectodermal dysplasia 1 germline 3 129461309 GGCATCTTGTTCCTCCAGTGACTTTGGTACGTTCTGATTCCTGATGTCCTGTCCTGGAATA 1060503759 390910 NM_003000.2(SDHB):c.602G>A (p.Trp201Ter) SDHB Nov 02, 2016 Human Phenotype Ontology:HP:0100723,MeSH:D046152,MedGen:C0238198,OMIM:606764,Orphanet:ORPHA44890;MedGen:C1861848,OMIM:115310;Human Phenotype Ontology:HP:0002666,MedGen:C0031511,OMIM:171300 Gastrointestinal stroma tumor;Paragangliomas 4;Pheochromocytoma germline 1 17024013 GCTGTAGCACCAGCTGCCCCAGCTACTGGTGGAACGGAGACAAATATCTGGGGCCTGCAGT 1064793964 411320 NM_004006.2(DMD):c.2555G>A (p.Trp852Ter) DMD Jul 23, 2015 MedGen:CN517202 not provided germline X 32491344 TGGAGCAGATGACAACTACTGCTGAAAACTGGTTGAAAATCCAACCCACCACCCCATCAGA 118192122 76888 NM_000540.2(RYR1):c.7361G>A (p.Arg2454His) RYR1 May 11, 2010 MedGen:C0751951,OMIM:117000,Orphanet:ORPHA597,SNOMED CT:43152001;MedGen:CN517202 Central core disease;not provided unknown 19 38500643 AAGCCGGCAAGGGTGAGGCCCTGCGGATCCGCGCCATCCTCCGCTCCCTTGTGCCCTTGGA 1131690920 420726 NM_000455.4(STK11):c.920+1G>A STK11 Jul 27, 2012 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 19 1222007 GTTCTCCATCCGGCAGATCCGGCAGCACAGGTGAGCGGCCCCTGGGGGCAGTGGGGCCGAG 149003934 49765 NM_025137.3(SPG11):c.6157G>A (p.Val2053Met) SPG11 Jan 31, 2013 MedGen:C1858479,OMIM:604360,Orphanet:ORPHA2822 Spastic paraplegia 11, autosomal recessive not provided 15 44573595 GGCCTTAAGCCAGATACTGTGGCTGAACTCGTGGCAGAAGAGGTGACACGGGAGCTGCTTA 118203918 15679 NM_016513.4(ICK):c.815G>A (p.Arg272Gln) ICK Feb 01, 2009 MedGen:C2675227,OMIM:612651,Orphanet:ORPHA199332 Endocrine-cerebroosteodysplasia germline 6 53016099 GAGACATGCTTCAGTGGGATCCCAAGAAACGACCAACAGCTAGTCAGGTTTTCTTCCATTT 886039451 360692 NM_000377.2(WAS):c.559+5G>A WAS Dec 24, 2015 MedGen:CN517202 not provided germline X 48686139 CCTGCATCCAGGTGGAGACCAAGGAGGTGCGTGCTGATTCTTCCCTGTGTCTCTGGATGGA 1057521924 377988 NM_006086.3(TUBB3):c.862G>A (p.Glu288Lys) TUBB3 Jan 18, 2017 MedGen:CN517202 not provided germline 16 89935313 AGCCAGCAGTACCGGGCCCTGACCGTGCCCGAGCTCACCCAGCAGATGTTCGATGCCAAGA 104893676 20390 NM_016006.4(ABHD5):c.19G>A (p.Glu7Lys) ABHD5 Nov 01, 2001 MedGen:C0268238,OMIM:275630,Orphanet:ORPHA98907,SNOMED CT:19604005 Triglyceride storage disease with ichthyosis germline 3 43691011 GCGGCGGCGGCTATGGCGGCGGAGGAGGAGGAGGTGGACTCTGCCGACACCGGAGAGAGGT 1131691936 424618 NM_172107.3(KCNQ2):c.902G>A (p.Gly301Asp) KCNQ2 Aug 01, 2017 MedGen:C3150986,OMIM:613720,Orphanet:ORPHA439218 Early infantile epileptic encephalopathy 7 de novo 20 63439623 GGCTCCTTGCGGCAACCTTCACCCTCATCGGTGTCTCCTTCTTCGCGCTGCCTGCAGTAAG 1064794618 410283 NM_000546.5(TP53):c.159G>A (p.Trp53Ter) TP53 Jun 02, 2017 MedGen:CN517202 not provided germline 17 7676210 GATGCTGTCCCCGGACGATATTGAACAATGGTTCACTGAAGACCCAGGTCCAGATGAAGCT 140342925 150591 NM_001128425.1(MUTYH):c.734G>A (p.Arg245His) MUTYH Sep 27, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1837991,OMIM:608456,Orphanet:ORPHA247798;MedGen:C1837991,OMIM:608456,Orphanet:ORPHA247798;Human Phenotype Ontology:HP:0006753,MeSH:D013274,MedGen:C0038356,OMIM:613659,SNOMED CT:126824007;Human Phenotype Ontology:HP:0030434,MeSH:D018296,MedGen:C0206711,OMIM:132600,Orphanet:ORPHA91414;MedGen:CN517202 Hereditary cancer-predisposing syndrome;MYH-associated polyposis;MYH-associated polyposis;Neoplasm of stomach;Pilomatrixoma;not provided germline;unknown 1 45332445 TGGATGGCAACGTAGCACGGGTGCTGTGCCGTGTCCGAGCCATTGGTGCTGATCCCAGCAG 3729851 426527 NM_002052.4(GATA4):c.997+200G>A GATA4 Jan 07, 2017 MedGen:C0152021,SNOMED CT:13213009 Congenital heart disease unknown 8 11755333 CAATTGCCATGGAACGTGTTGGGAGCTTTCGAAGCAGGCTCAACTCAAGCTGGGGCCTGAT 121909211 22908 NM_000358.2(TGFBI):c.371G>A (p.Arg124His) TGFBI Apr 01, 2004 MedGen:C1275685,OMIM:607541,Orphanet:ORPHA98963,SNOMED CT:397568004 Avellino corneal dystrophy germline 5 136046407 GATCCACCACCACTCAGCTGTACACGGACCGCACGGAGAAGCTGAGGCCTGAGATGGAGGG 199474724 49658 NM_005572.3(LMNA):c.674G>A (p.Arg225Gln) LMNA Jan 17, 2013 MedGen:C0410190,OMIM:181350,Orphanet:ORPHA98853,SNOMED CT:240072005;MedGen:C2750035,OMIM:616516,Orphanet:ORPHA98855 Benign scapuloperoneal muscular dystrophy with cardiomyopathy;Emery-Dreifuss muscular dystrophy 3, autosomal recessive germline 1 156134839 TGCGTGAGACCAAGCGCCGTCATGAGACCCGACTGGTGGAGATTGACAATGGGAAGCAGCG 587779631 107107 NM_000090.3(COL3A1):c.1267G>A (p.Gly423Ser) COL3A1 Aug 21, 2017 MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000;MedGen:CN517202 Ehlers-Danlos syndrome, type 4;not provided germline 2 188994306 CGGGGTCCTCCAGGACCAGCCGGTGCTAATGGTGCTCCTGGACTGCGAGGTGGTGCAGTAA 267607035 33440 NM_016955.3(SEPSECS):c.715G>A (p.Ala239Thr) SEPSECS Oct 08, 2010 MedGen:C3151140,OMIM:613811 Pontocerebellar hypoplasia type 2D germline 4 25152049 AATATTTATGTTTATAGATTAGAAGAACTGGCTGTGATTTGTGCTAATTATGACATTCCAC 773785934 224796 NM_001953.4(TYMP):c.1301-1G>A TYMP Jan 14, 2016 MedGen:C0872218,OMIM:603041,Orphanet:ORPHA298 Mitochondrial DNA depletion syndrome 1 (MNGIE type) germline 22 50525919 GCGCGGCCTCTAACAGCCCCTCGCTCTGCAGGGACCCCCTGGCTCCGCGTGCACCGGGACG 121964861 27456 NM_000364.3(TNNT2):c.829G>A (p.Asp277Asn) TNNT2 Nov 16, 2004 MedGen:C1832243,OMIM:601494 Left ventricular noncompaction 6 germline 1 201359636 CAGATCAATGTTCTCCGAAACAGGATCAACGATAACCAGAAAGTGTAAGTGTCTGAGGTCA 121908654 21346 NM_001015879.1(AURKC):c.629G>A (p.Cys210Tyr) AURKC Apr 01, 2009 MedGen:C0403812,OMIM:243060,Orphanet:ORPHA137893,SNOMED CT:236806004 Infertility associated with multi-tailed spermatozoa and excessive DNA germline 19 57234985 AGGTGGATTTGTGGTGCATTGGAGTGCTCTGCTATGAGCTGCTGGTGGGATATCCACCCTT 149344567 190051 NM_004980.4(KCND3):c.1798G>A (p.Gly600Arg) KCND3 Jun 01, 2012 MedGen:C4225340,OMIM:616399 Brugada syndrome 9 germline 1 111776247 CGCTCCAGCCTTAATTTGAAAGCAGACGACGGACTGAGACCAAACTGCAAAACATCCCAGA 104886375 35601 NM_000495.4(COL4A5):c.322-1G>A COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108568758 TATTATACATGTGTTATGTCGCTTTTCAAAGGGAATGCCAGGCCACGATGGGGCCCCAGGA 372006750 186764 NM_019098.4(CNGB3):c.1578+1G>A CNGB3 Mar 27, 2017 MedGen:C1849792,OMIM:262300 Achromatopsia 3 germline;unknown 8 86625982 AGCATCATCAGCAAAGTCGACTTGTTCAAGGCAAGTGCTTTTACAATTAATAGACTCTGTA 879255651 247611 NM_000902.3(MME):c.428G>A (p.Cys143Tyr) MME Oct 06, 2016 MedGen:C4310763,OMIM:617018 Spinocerebellar ataxia 43 germline 3 155116548 TGCAGAAAGCAAAAGCATTGTACAGGTCTTGTATAAATGAATGTAAGTGCTCTTCATTTGA 727502886 172928 NM_001103.3(ACTN2):c.355G>A (p.Ala119Thr) ACTN2 Apr 25, 2017 Human Phenotype Ontology:HP:0001638,MedGen:C0878544,Orphanet:ORPHA167848,SNOMED CT:85898001;MedGen:C2677338,OMIM:612158;MedGen:CN229563 Cardiomyopathy;Dilated cardiomyopathy 1AA;Familial hypertrophic cardiomyopathy 23 germline 1 236719007 AGCAAAGGGGTGAAACTGGTGTCCATTGGCGCTGAAGGTGAGAGGTGTGGTGGGTGGTCCT 62637337 259989 NM_004183.3(BEST1):c.636+1G>A BEST1 May 26, 2016 MedGen:CN517202 not provided germline 11 61956999 GACCCTATCCTGCTCCAGAGCCTGCTGAACGTGAGCCCACTGTACAGACAGGGCTGCCGCA 118192104 24624 m.8361G>A MT-TK Jan 29, 2015 MedGen:C0162672,OMIM:545000,Orphanet:ORPHA551 Myoclonus with epilepsy with ragged red fibers germline MT 8361 AAAGATTAAGAGAACCAACACCTCTTTACAGTGAAATGCCCCAACTAAATACTACCGTATG 796052959 201617 NM_001165963.1(SCN1A):c.603-1G>A SCN1A Dec 16, 2013 MedGen:CN517202 not provided germline 2 166052944 TTTGTGTTTGTGTGTGAACTCCCTATTACAGGTACGTCACAGAGTTTGTGGACCTGGGCAA 398123515 99292 NM_000709.3(BCKDHA):c.979G>A (p.Glu327Lys) BCKDHA Sep 05, 2013 MedGen:C0024776,OMIM:248600,SNOMED CT:27718001 Maple syrup urine disease germline 19 41422754 GCTGTGGCAGAGAACCAGCCCTTCCTCATCGAGGCCATGACCTACAGGTGCCTGCCGCTCC 1064794149 411240 NM_000284.3(PDHA1):c.905G>A (p.Arg302His) PDHA1 Sep 09, 2015 MedGen:CN517202 not provided germline X 19358921 GATTACTACTTTTCCCTCCCCATAGTTACCGTACACGAGAAGAAATTCAGGAAGTAAGAAG 121913621 29182 NM_002470.3(MYH3):c.1123G>A (p.Glu375Lys) MYH3 May 01, 2006 MedGen:C1834523,OMIM:601680,Orphanet:ORPHA1147 Distal arthrogryposis type 2B germline 17 10645725 TTCAAGCAGAAGCAGCGAGAGGAGCAGGCCGAGCCGGATGGCACAGAAGGTACAAAATCAG 28941473 17441 NM_000048.3(ASL):c.532G>A (p.Val178Met) ASL Aug 04, 2017 MedGen:C0268547,OMIM:207900,Orphanet:ORPHA23,SNOMED CT:41013004 Argininosuccinate lyase deficiency germline 7 66086751 CTCCTGCCCCTGGCTTCCCACAGCCACGCCGTGGCACTGACCCGAGACTCTGAGCGGCTGC -1 477762 NM_004360.4(CDH1):c.308G>A (p.Trp103Ter) CDH1 Apr 15, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 16 68801814 ACCCACAGATCCATTTCTTGGTCTACGCCTGGGACTCCACCTACAGAAAGTTTTCCACCAA 886039252 259339 NM_001242896.1(DEPDC5):c.624+1G>A DEPDC5 Apr 13, 2016 Gene:50987,MedGen:C1858477,OMIM:604364 Epilepsy, familial focal, with variable foci 1 germline 22 31784876 TTCCTTGCTGATCTATTTACCAAGTGGAAGGTACATTTCTTCTTACACACTAAGTCTCATT 794728843 197003 NM_198056.2(SCN5A):c.611+1G>A SCN5A May 24, 2017 MedGen:C1142166,Orphanet:ORPHA130,SNOMED CT:418818005;MedGen:CN029323,OMIM:601144;MedGen:CN517202 Brugada syndrome;Brugada syndrome 1;not provided germline;unknown 3 38620842 CTGGCTGGACTTTAGTGTGATTATCATGGCGTAAGTATCTCATTTGCTATGCTGTGCTATG 869312132 225800 NM_001918.3(DBT):c.1033G>A (p.Gly345Arg) DBT Jan 01, 2013 MedGen:C0024776,OMIM:248600,SNOMED CT:27718001 Maple syrup urine disease germline 1 100206621 TTTTTTATTTTTTAGGCTTCTCATAACATTGGGATAGCAATGGATACTGAGCAGGGTTTGA 80357292 46268 NM_007294.3(BRCA1):c.962G>A (p.Trp321Ter) BRCA1 Nov 09, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202;MedGen:CN169374 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided;not specified germline 17 43094569 CTGGCTTAGCAAGGAGCCAACATAACAGATGGGCTGGAAGTAAGGAAACATGTAATGATAG -1 434134 NM_174936.3(PCSK9):c.76G>A (p.Ala26Thr) PCSK9 - MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 1 55039913 CTGCTGCTGCTGCTGCTGCTCCTGGGTCCCGCGGGCGCCCGTGCGCAGGAGGACGAGGACG 121434522 20739 NM_005977.3(RNF6):c.305G>A (p.Arg102Lys) RNF6 Aug 01, 2002 MedGen:C4016881 Esophageal squamous cell carcinoma, somatic somatic 13 26215577 TGCTTTGCTTTCTAGACTCAGAAGTCCCTAGAGAAAGTTCACATGAAGATTCTCTTCTAGA 564317065 170946 NM_030777.3(SLC2A10):c.737G>A (p.Gly246Glu) SLC2A10 Sep 10, 2014 MedGen:C1859726,OMIM:208050,Orphanet:ORPHA3342 Arterial tortuosity syndrome germline 20 46725773 TGGGGCTGGTGCTCTTCCAGCAACTAACAGGGCAGCCCAACGTGCTGTGCTATGCCTCCAC 104893689 23353 NM_000388.3(CASR):c.554G>A (p.Arg185Gln) CASR Sep 20, 2016 MedGen:C1809471,OMIM:145980,Orphanet:ORPHA93372,SNOMED CT:190868007;MedGen:C1832615,OMIM:239200,Orphanet:ORPHA417;MedGen:CN517202 Hypocalciuric hypercalcemia, familial, type 1;Neonatal severe hyperparathyroidism;not provided germline;maternal 3 122261589 GCAACAAGAATCAATTCAAGTCTTTCCTCCGAACCATCCCCAATGATGAGCACCAGGCCAC 780990272 260054 NM_000359.2(TGM1):c.872G>A (p.Gly291Asp) TGM1 Mar 06, 2017 MedGen:CN517202 not provided germline 14 24259944 CACAGATTGGTGAGCGGACCTGGAACTACGGCCAGGTATGGTGCGGCTGGCCAGGGTCACA 1085307149 414075 NM_001204.6(BMPR2):c.27G>A (p.W9*) BMPR2 - MedGen:C0152171,OMIM:178600,SNOMED CT:26174007 Primary pulmonary hypertension germline 2 202377501 AGGGATGACTTCCTCGCTGCAGCGGCCCTGGCGGGTGCCCTGGCTACCATGGACCATCCTG 80358150 46210 NM_007294.3(BRCA1):c.5277+1G>A BRCA1 Aug 08, 2017 MedGen:C2676676,OMIM:604370;MedGen:C0677776,Orphanet:ORPHA145;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202;MedGen:CN169374 Breast-ovarian cancer, familial 1;Hereditary breast and ovarian cancer syndrome;Hereditary cancer-predisposing syndrome;not provided;not specified germline;unknown 17 43057051 AAGCGAGCAAGAGAATCCCAGGACAGAAAGGTAAAGCTCCCTCCCTCAAGTTGACAAAAAT 104894089 24035 NM_000349.2(STAR):c.559G>A (p.Val187Met) STAR Dec 01, 2006 MedGen:C0342474,OMIM:201710,Orphanet:ORPHA90790,SNOMED CT:44231009 Cholesterol monooxygenase (side-chain cleaving) deficiency germline 8 38146054 AACCTGGTGGGGCCCCGTGACTTTGTGAGCGTGCGCTGTGCCAAGCGCCGAGGCTCCACCT 749383757 404684 NM_016532.3(INPP5K):c.418G>A (p.Gly140Ser) INPP5K Jul 21, 2017 MedGen:CN241833,OMIM:617404 Muscular dystrophy, congenital, with cataracts and intellectual disability germline 17 1509314 GGTGGAGTCAACATCTGCCTGAAGCTTTATGGCTACTATGTCAGCATCATCAACTGCCACC 267606948 18910 NM_006623.3(PHGDH):c.1129G>A (p.Gly377Ser) PHGDH May 01, 2009 MedGen:C1866174,OMIM:601815 Phosphoglycerate dehydrogenase deficiency germline 1 119741817 GGGAACTGCCTAAGCCCCGCAGTCATTGTCGGCCTCCTGAAAGAGGCTTCCAAGCAGGCGG 1114167410 414023 NM_000088.3(COL1A1):c.752G>A (p.Gly251Asp) COL1A1 - MedGen:C0023931,OMIM:166200,SNOMED CT:385482004 Osteogenesis imperfecta type I unknown 17 50197062 CCTTCCTTGTCTTCTTCATCTCTCTCCAGGGTGCTCGAGGATTGCCCGGAACAGCTGGCCT 869320713 227161 NM_001202468.1(ZMYND11):c.1262G>A (p.Ser421Asn) ZMYND11 Apr 13, 2016 Human Phenotype Ontology:HP:0001249,MedGen:C1843367;MedGen:C4015167,OMIM:616083;MedGen:CN517202 Intellectual disability;Mental retardation, autosomal dominant 30;not provided de novo;germline 10 248370 CAGAGCCTGAAACAGAAGCAGTAAGTTCTAGCCAGGAAATACCCACGATGCCTCAGCCCAT 398123643 99797 NM_001848.2(COL6A1):c.877G>A (p.Gly293Arg) COL6A1 Mar 02, 2017 MedGen:CN029274,OMIM:158810;MedGen:CN033863,OMIM:254090 Bethlem myopathy 1;Ullrich congenital muscular dystrophy 1 germline 21 45989626 CCTGTGTTCCAGGGAAGACCCGGGGACCTCGGACCTGTTGGGTACCAGGGAATGAAGGTAC 150877497 226470 NM_003494.3(DYSF):c.3113G>A (p.Arg1038Gln) DYSF Apr 27, 2017 MedGen:C2931687,Orphanet:ORPHA207073;MedGen:C1850889,OMIM:253601,Orphanet:ORPHA268;MedGen:CN517202 Dysferlinopathy;Limb-girdle muscular dystrophy, type 2B;not provided germline;unknown 2 71570680 TCCCTGCTGAGAAGATGTACTACACACACCGACGGCGGCGCTGGGTGCGCCTGCGCAGGAG 398123127 98276 NM_000048.3(ASL):c.602+1G>A ASL Nov 14, 2013 MedGen:CN517202 not provided germline 7 66086822 GAAGCGGATCAATGTCCTGCCCCTGGGGAGGTGGGTGAGGCTCCAGTGCCCCGAGGGCCTG 121908899 21418 NM_003880.3(WISP3):c.434G>A (p.Cys145Tyr) WISP3 Sep 01, 1999 MedGen:C0432215,OMIM:208230,Orphanet:ORPHA1159,SNOMED CT:254065005 Progressive pseudorheumatoid dysplasia germline 6 112064842 TTCAGCCCAACCCCTTGTTCAGCTGCCTCTGTGTGAGTGGGGCCATTGGATGCACACCTCT 121907899 18549 NM_000272.3(NPHP1):c.1027G>A (p.Gly343Arg) NPHP1 Jul 11, 2017 MedGen:C0687120,Orphanet:ORPHA655,SNOMED CT:204958008;MedGen:C1855681,OMIM:256100,Orphanet:ORPHA93592;MedGen:CN517202 Nephronophthisis;Nephronophthisis 1;not provided germline 2 110163048 CCTTCCACGCTCTCACAGCTTCTGGAGGAAGGTAATGCGTGCCTATCAGCCACTGCACTCT 121918289 17783 NM_004183.3(BEST1):c.256G>A (p.Val86Met) BEST1 Oct 01, 2004 MedGen:C1860406,OMIM:193220,Orphanet:ORPHA3086 Vitreoretinochoroidopathy germline 11 61955726 GCCCCCCGCCCCTCCTGCCCAGGCTTCTACGTGACGCTGGTCGTGACCCGCTGGTGGAACC 121909136 22638 NM_000085.4(CLCNKB):c.1830G>A (p.Trp610Ter) CLCNKB Nov 25, 2015 MedGen:C1846344;MedGen:CN517202 Bartter syndrome, type 3, with hypocalciuria;not provided germline 1 16055508 GCAGGCCCTGAAGGCTGAGCCTCCTTCCTGGGCTCCTGGACACCAGGTGGGTACTCCTGAG -1 440685 NM_000091.4(COL4A3):c.3620G>A (p.Gly1207Glu) COL4A3 Nov 08, 2016 MedGen:CN517202 not provided germline 2 227297728 CAGGTTTTCCTGGCCTCCCGGGCAGAAAAGGGGCCATGGGAGATGCTGGACCTCGAGGACC -1 434169 NM_000384.2(APOB):c.10724G>A (p.Gly3575Asp) APOB - MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 2 21006144 ACAGTACGAAAAACCACTTACAGCTAGAGGGCCTCTTTTTCACCAACGGAGAACATACAAG 113605875 27564 NM_004612.3(TGFBR1):c.1460G>A (p.Arg487Gln) TGFBR1 Jul 13, 2017 MedGen:C2697932,Orphanet:ORPHA60030,SNOMED CT:446263001;MedGen:C2697933,OMIM:609192;MedGen:CN118826,Orphanet:ORPHA91387;MedGen:CN517202 Loeys-Dietz syndrome;Loeys-Dietz syndrome 1;Thoracic aortic aneurysm and aortic dissection;not provided germline 9 99149253 CCAATGGAGCAGCTAGGCTTACAGCATTGCGGATTAAGAAAACATTATCGCAACTCAGTCA 886041904 264682 NM_000088.3(COL1A1):c.3415G>A (p.Gly1139Ser) COL1A1 Jul 20, 2016 MedGen:CN517202 not provided germline 17 50187492 CAAGGTCCCTCTGGAGCCTCTGGTCCTGCTGGTCCCCGAGTAAGTCATGCCTTCTCTCTCC 397517154 49153 NM_005633.3(SOS1):c.1655G>A (p.Arg552Lys) SOS1 May 15, 2017 MeSH:D009634,MedGen:C0028326,Orphanet:ORPHA648,SNOMED CT:205824006;MedGen:C1860991,OMIM:609942;MedGen:C1853120,OMIM:610733;MedGen:CN517202 Noonan syndrome;Noonan syndrome 3;Noonan syndrome 4;not provided germline 2 39022773 TATCTTTACAGTACCGGAGTACACTGGAAAGGATGCTTGATGTAACAATGCTACAGGAAGA 774318611 260378 NM_024818.4(UBA5):c.164G>A (p.Arg55His) UBA5 Oct 06, 2016 MedGen:C4310700,OMIM:617132 Epileptic encephalopathy, early infantile, 44 germline 3 132665825 TTTAAAACATATTTTTCTTTGTTTTAAGCCGCTTGATGGCATTGAAACGAATGGGAATTGT 387906816 39166 NM_005257.5(GATA6):c.551G>A (p.Ser184Asn) GATA6 Oct 01, 2010 MedGen:C3280943,OMIM:614475;Human Phenotype Ontology:HP:0001636,MedGen:C0039685,OMIM:187500,Orphanet:ORPHA3303,SNOMED CT:86299006 Atrial septal defect 9;Tetralogy of Fallot germline 18 22171695 CCGCGGCGGCAGCAGCCGCGGCGGCGGCCAGCTCCCCGGTCTACGTGCCCACCACCCGCGT 72554347 103050 NM_000531.5(OTC):c.292G>A (p.Glu98Lys) OTC - MedGen:CN517202 not provided unknown X 38369871 AAAAGAAGTACTCGAACAAGATTGTCTACAGAAACAGGTAAGTCCACTGCCAAATTCACAC 80356794 76551 NM_001876.3(CPT1A):c.1425G>A (p.Trp475Ter) CPT1A Mar 07, 2013 MedGen:C0342789,OMIM:255120,SNOMED CT:238001003 Carnitine palmitoyltransferase I deficiency not provided 11 68780673 GAAGATGGGCCTCAACGCTGAACACTCCTGGGCAGATGCGCCGATCGTGGCCCACCTTTGG 1064792859 224744 NM_001257989.1(TYMP):c.228G>A (p.Met76Ile) TYMP Jan 14, 2016 MedGen:C0872218,OMIM:603041,Orphanet:ORPHA298 Mitochondrial DNA depletion syndrome 1 (MNGIE type) germline 22 50529325 GTACCCCCACATACCAGGGGCCATGCTGATGGCCATCCGACTTCGGGGCATGGATCTGGAG 387906653 38751 NM_006749.4(SLC20A2):c.1723G>A (p.Glu575Lys) SLC20A2 Feb 12, 2012 Gene:23706,MedGen:C0393590,OMIM:213600,Orphanet:ORPHA1980,SNOMED CT:110997000 Idiopathic basal ganglia calcification 1 germline 8 42428829 TCATGCTCCCCCCACAGCGGCTTCACGATCGAGCTGGCCTCAGCCTTCACAGTGGTGATCG 180675584 364147 NM_138694.3(PKHD1):c.5912G>A (p.Gly1971Asp) PKHD1 Jan 06, 2017 MedGen:CN517202 not provided germline 6 51934319 ACTGACAATTTTCCCTTTGTCCATTAGGGGGCAAGCTGATTTTCATGGCCCCAGGACCCAT 745973997 259925 NM_003383.4(VLDLR):c.1586G>A (p.Trp529Ter) VLDLR Aug 13, 2015 MedGen:CN517202 not provided germline 9 2646435 CTGTTGATTGGGTGTACAAGACCATCTACTGGACTGATGCGGCTTCTAAGACTATTTCAGT 922847767 439573 NM_005458.7(GABBR2):c.1699G>A (p.Ala567Thr) GABBR2 Mar 15, 2018 MedGen:CN870852,OMIM:617903;MedGen:C0035372,OMIM:312750,Orphanet:ORPHA778,SNOMED CT:68618008 NEURODEVELOPMENTAL DISORDER WITH POOR LANGUAGE AND LOSS OF HAND SKILLS;Rett syndrome de novo;germline;not applicable 9 98371535 ACCTGGATTCTCACCGTGGGCTACACGACCGCTTTTGGGGCCATGTTTGCAAAGACCTGGA 267607126 27483 NM_003280.2(TNNC1):c.251G>A (p.Cys84Tyr) TNNC1 Aug 01, 2008 MedGen:C2750472,OMIM:613243 Familial hypertrophic cardiomyopathy 13 germline 3 52451810 TTGATGAGTTCCTGGTCATGATGGTTCGGTGCATGAAGGACGACAGCAAAGGGAAATCTGA 397515381 26662 NM_004595.4(SMS):c.329+5G>A SMS Jun 27, 2013 MedGen:C0796160,OMIM:309583,Orphanet:ORPHA3063 Snyder Robinson syndrome germline X 21972576 CAGGACAGTACTGGGCGGGTGAAACGGTAAGTCCACTCTTGAATGTCCTTTTATATTTAAT 72555391 15971 NM_000404.3(GLB1):c.1445G>A (p.Arg482His) GLB1 Aug 09, 2016 MedGen:C0085131,Orphanet:ORPHA354;MedGen:C0268272,OMIM:230600,Orphanet:ORPHA79256,SNOMED CT:18756002;MedGen:C0268273,OMIM:230650,Orphanet:ORPHA79257;MedGen:C0268271,OMIM:230500,Orphanet:ORPHA79255,SNOMED CT:238026007;MedGen:C0086652,OMIM:253010,Orphanet:ORPHA309310,SNOMED CT:238044004 GM1 gangliosidosis;GM1 gangliosidosis type 2;Gangliosidosis GM1 type 3;Infantile GM1 gangliosidosis;Mucopolysaccharidosis, MPS-IV-B germline 3 33016743 CTCTGGACCTTCTGGTAGAGAACATGGGACGTGTGAACTATGGTGCATATATCAACGATTT 28937575 22026 NM_004473.3(FOXE1):c.170G>A (p.Ser57Asn) FOXE1 Mar 01, 2011 MedGen:C1855794,OMIM:241850,Orphanet:ORPHA1226 Bamforth syndrome germline 9 97854084 GCCCCCTGCAGCGCGGGAAGCCGCCCTACAGCTACATCGCGCTCATCGCCATGGCCATCGC 1057520715 378336 NM_000516.5(GNAS):c.125G>A (p.Arg42His) GNAS May 21, 2015 MedGen:CN517202 not provided germline 20 58891851 AGGACAAGCAGGTCTACCGGGCCACGCACCGCCTGCTGCTGCTGGGTAAGGGCGGGCGGGG 61754360 18823 NM_000372.4(TYR):c.533G>A (p.Trp178Ter) TYR Jul 01, 1991 MedGen:C0268494,OMIM:203100,Orphanet:ORPHA79431,SNOMED CT:6483008;MedGen:CN517202 Tyrosinase-negative oculocutaneous albinism;not provided germline 11 89178486 ACGACATCAATATTTATGACCTCTTTGTCTGGATGCATTATTATGTGTCAATGGATGCACT 80356463 23639 NM_175875.4(SIX5):c.1093G>A (p.Gly365Arg) SIX5 Aug 27, 2009 MedGen:C1970479,OMIM:610896 Branchiootorenal syndrome 2 germline 19 45766866 AGCCTGGGCCCGCTGCTGCTCACTGGGGGCGGGGGTGCCCCTCCACCGCAGCCCAGCCCTC 587779706 107218 NM_000090.3(COL3A1):c.2096G>A (p.Gly699Asp) COL3A1 Mar 25, 2015 MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000;MedGen:CN118826,Orphanet:ORPHA91387 Ehlers-Danlos syndrome, type 4;Thoracic aortic aneurysm and aortic dissection germline 2 188999358 CAGGGGCCCCAGGACTTAGAGGTGGAGCTGGTCCCCCTGGTCCCGAAGGAGGAAAGGTAAC 863224451 213392 NM_000546.5(TP53):c.824G>A (p.Cys275Tyr) TP53 Jul 26, 2017 Human Phenotype Ontology:HP:0030078,MeSH:C538231,MedGen:C0152013;Human Phenotype Ontology:HP:0006744,MeSH:D018268,MedGen:C0206686,Orphanet:ORPHA1501;Human Phenotype Ontology:HP:0011459,MedGen:C0152018,Orphanet:ORPHA70482;Human Phenotype Ontology:HP:0005550,MeSH:D015451,MedGen:C0023434,OMIM:151400,SNOMED CT:277473004,SNOMED CT:51092000;MeSH:D015179,MedGen:CN236642;Human Phenotype Ontology:HP:0100843,MeSH:D005909,MedGen:C0017636,SNOMED CT:63634009;MedGen:C2239176,OMIM:114550,Orphanet:ORPHA88673,SNOMED CT:187769009,SNOMED CT:25370001;MedGen:C0027672,SNOMED CT:699346009;MedGen:C0085390,Orphanet:ORPHA524,SNOMED CT:428850001;MeSH:C562393,MedGen:C0151779,SNOMED CT:93655004;Human Phenotype Ontology:HP:0006775,MeSH:D009101,MedGen:C0026764,OMIM:254500,Orphanet:ORPHA29073,SNOMED CT:109989006,SNOMED CT:55921005;Human Phenotype Ontology:HP:0030692,MeSH:D001932,MedGen:C0006118,SNOMED CT:126952004;Human Phenotype Ontology:HP:0100013,MeSH:D001943,MedGen:C1458155,Orphanet:ORPHA180250,SNOMED CT:126926005;MedGen:C0279663;Human Phenotype Ontology:HP:0006725,MedGen:C0281361;Human Phenotype Ontology:HP:0005584,MeSH:D002292,MedGen:C0007134,OMIM:605074,Orphanet:ORPHA217071,SNOMED CT:41607009;MeSH:C535575,MedGen:C1168401,OMIM:275355,Orphanet:ORPHA67037;Human Phenotype Ontology:HP:0006740,MedGen:C0279680;MedGen:CN517202 Adenocarcinoma of lung;Adrenocortical carcinoma;Carcinoma of esophagus;Chronic lymphocytic leukemia;Colorectal Neoplasms;Glioblastoma;Hepatocellular carcinoma;Hereditary cancer-predisposing syndrome;Li-Fraumeni syndrome;Malignant melanoma of skin;Multiple myeloma;Neoplasm of brain;Neoplasm of the breast;Ovarian Serous Cystadenocarcinoma;Pancreatic adenocarcinoma;Renal cell carcinoma, papillary, 1;Squamous cell carcinoma of the head and neck;Transitional cell carcinoma of the bladder;not provided germline;somatic 17 7673796 TGGGACGGAACAGCTTTGAGGTGCGTGTTTGTGCCTGTCCTGGGAGAGACCGGCGCACAGA 120074119 18021 NM_000543.4(SMPD1):c.1735G>A (p.Gly579Ser) SMPD1 Sep 30, 1991 MedGen:C0268242,OMIM:257200,Orphanet:ORPHA77292,SNOMED CT:52165006 Niemann-Pick disease, type A germline 11 6394446 TTCCAGACCTTCTGGTTTCTCTACCATAAGGGCCACCCACCCTCGGAGCCCTGTGGCACGC 886042041 264765 NM_001958.3(EEF1A2):c.370G>A (p.Glu124Lys) EEF1A2 Sep 22, 2017 MedGen:CN517202 not provided germline 20 63495056 CTGATCGTGGCGGCGGGCGTGGGCGAGTTCGAGGCGGGCATCTCCAAGAATGGGCAGACGC 28936700 22769 NM_000104.3(CYP1B1):c.182G>A (p.Gly61Glu) CYP1B1 Sep 26, 2017 Human Phenotype Ontology:HP:0000557,MedGen:C0020302,OMIM:231300,Orphanet:ORPHA98976;MedGen:CN517202 Buphthalmos;not provided germline 2 38075207 CCCCGGGCCCGTTTGCGTGGCCACTGATCGGAAACGCGGCGGCGGTGGGCCAGGCGGCTCA 116840778 23322 NM_033337.2(CAV3):c.80G>A (p.Arg27Gln) CAV3 Jul 24, 2017 Human Phenotype Ontology:HP:0003236,MedGen:C0241005,OMIM:123320;MedGen:C3280443,OMIM:614321;MedGen:C1832567,OMIM:607801,Orphanet:ORPHA265;MeSH:D008133,MedGen:C0023976,SNOMED CT:9651007;MedGen:C1853698,OMIM:606072,Orphanet:ORPHA97238;MedGen:C1832560;MedGen:CN517202 Creatine phosphokinase, elevated serum;Distal myopathy, Tateyama type;Limb-girdle muscular dystrophy, type 1C;Long QT syndrome;Rippling muscle disease;Rippling muscle disease 2;not provided de novo;germline 3 8733956 TCCACTGCAAGGAGATTGACCTGGTGAACCGAGACCCCAAGAACATTAACGAGGACATAGT 794728000 196432 NM_207111.3(RNF216):c.1367G>A (p.Gly456Glu) RNF216 Apr 28, 2015 MedGen:C1859305,OMIM:212840,Orphanet:ORPHA1173 Gordon Holmes syndrome germline 7 5729454 ACATCAAGTGGGCCCTGCACGAGCTCAAAGGACACTATGCAATCACCCGAAAGGTACTCTA 587779716 107233 NM_000090.3(COL3A1):c.2735G>A (p.Gly912Asp) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189004055 ATGGGCCCCCAGGTCCTGCGGGTAACACTGGTGCTCCTGGCAGCCCTGGAGTGTCTGGACC 119103273 17294 NM_000265.5(NCF1):c.574G>A (p.Gly192Ser) NCF1 Dec 01, 2006 MedGen:C1856251,OMIM:233700 Chronic granulomatous disease, autosomal recessive cytochrome b-positive, type 1 germline 7 74783061 GTGGTGGAGGTCGTAGAGAAGAGCGAGAGCGGTCAGACCTCCCACCTTACGGGGCTCCTTC 1060502643 404229 NM_004006.2(DMD):c.4071+1G>A DMD Dec 20, 2016 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001 Duchenne muscular dystrophy germline X 32438240 AATTCTCGTTGGAGGGAACTACATGAAGAGGTATGAAGATAAGTGAAAAATCTCTTTAATC 863223319 375629 NM_013275.5(ANKRD11):c.7570-1G>A ANKRD11 Jun 16, 2015 MedGen:CN517202 not provided germline 16 89274958 CCCAGCTCACTCTACTCCTCTCCTCCTTCAGGAGAAGCTGATCGTATCCTGTGAGCAGGAG 770932296 205779 NM_000520.5(HEXA):c.806-7G>A HEXA Jul 02, 2014 MedGen:CN068774;MedGen:C0039373,OMIM:272800,Orphanet:ORPHA845,SNOMED CT:111385000 Gm2-gangliosidosis, chronic;Tay-Sachs disease germline 15 72349266 ATTTGTGACACTCATATGGGGTTTTCTCTTGGCTTAGGTATCCCTGGATTACTGACTCCTT 104894409 32075 NM_004004.5(GJB2):c.250G>A (p.Val84Met) GJB2 Jun 08, 2016 MedGen:C2675750,OMIM:601544;MedGen:C2673759,OMIM:220290;MedGen:CN043648,Orphanet:ORPHA87884;MedGen:CN517202 Deafness, autosomal dominant 3a;Deafness, autosomal recessive 1A;Nonsyndromic hearing loss and deafness;not provided germline;unknown 13 20189332 ATCCGGCTATGGGCCCTGCAGCTGATCTTCGTGTCCACGCCAGCGCTCCTAGTGGCCATGC 104894310 21955 NM_003002.3(SDHD):c.14G>A (p.Trp5Ter) SDHD May 09, 2002 Human Phenotype Ontology:HP:0002666,MedGen:C0031511,OMIM:171300 Pheochromocytoma germline 11 112086921 GAGCCCTCAGGAACGAGATGGCGGTTCTCTGGAGGCTGAGTGCCGTTTGCGGTGCCCTAGG 104894253 24198 NM_153767.3(KCNJ1):c.535G>A (p.Ala179Thr) KCNJ1 Jan 01, 1997 MedGen:C1855849,OMIM:241200 Bartter syndrome, type 2, antenatal germline 11 128839709 CGTGCCAAGACCATTACGTTCAGCAAGAACGCAGTGATCAGCAAACGGGGAGGGAAGCTTT 137853264 25865 NM_004463.2(FGD1):c.1565G>A (p.Arg522His) FGD1 Nov 01, 2000 MedGen:C0175701,OMIM:305400,SNOMED CT:14921002 Aarskog syndrome germline X 54465522 ACATGCTGGAGCCTGTGCAGCGCATCCCCCGCTATGAGCTTCTTCTCAAGGACTATCTGTT 104886266 36037 NM_000495.4(COL4A5):c.3997G>A (p.Gly1333Ser) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108680751 CCTGGTCTCCCTGGTGTTCCAGGATTCCCAGGTATTTGAAGGGATTTTTGTGGTTTCCCTT 150726175 45795 NM_022787.3(NMNAT1):c.769G>A (p.Glu257Lys) NMNAT1 Aug 09, 2017 MeSH:D057130,MedGen:C0339527,Orphanet:ORPHA65,SNOMED CT:193413001;MedGen:C1837873,OMIM:608553;MedGen:CN517202 Leber congenital amaurosis;Leber congenital amaurosis 9;not provided germline;unknown 1 9982630 TACATTGAAAAGCATAATTTGTACAGCTCTGAGAGTGAAGACAGGAATGCTGGGGTCATCC 1060501467 394977 NM_001369.2(DNAH5):c.13331G>A (p.Trp4444Ter) DNAH5 Nov 30, 2016 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244 Ciliary dyskinesia germline 5 13708130 GCATGTTTGATGCTAGAATCCCTGCTTGGTGGAAAAAAGTACGTATAAGCCTGCTGTTATT 143570767 22199 NM_000492.3(CFTR):c.3873+1G>A CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008 Cystic fibrosis germline 7 117642594 TGGAGGAAAGCCTTTGGAGTGATACCACAGGTGAGCAAAAGGACTTAGCCAGAAAAAAGGC 137852899 17806 NM_024312.4(GNPTAB):c.2681G>A (p.Trp894Ter) GNPTAB May 10, 2012 MedGen:C2673377,OMIM:252500,Orphanet:ORPHA576 I cell disease germline 12 101764236 ACACAGATAGTTACTTGGGCTTTTTGCCATGGGAGAAAAAAAAGTATTTCCAAGATCTTCT 121917982 366161 NM_001165963.1(SCN1A):c.235G>A (p.Asp79Asn) SCN1A Jun 22, 2017 MedGen:CN517202 not provided germline 2 166073387 CCTCCAGAGATGGTGTCAGAGCCCCTGGAGGACCTGGACCCCTACTATATCAATAAGAAAG 137853285 166061 NM_000053.3(ATP7B):c.2128G>A (p.Gly710Ser) ATP7B Jun 01, 2017 MedGen:C0019202,OMIM:277900,Orphanet:ORPHA905,SNOMED CT:88518009;MedGen:CN517202 Wilson disease;not provided germline 13 51958538 GCCTTCACTGTCCTTGTCTTTCAGCTCCTCGGTGGGTGGTACTTCTACGTTCAGGCCTACA -1 424395 NM_003136.3(SRP54):c.677G>A (p.Gly226Glu) SRP54 Jul 14, 2017 MedGen:C0272170,OMIM:260400,Orphanet:ORPHA811,SNOMED CT:89454001 Shwachman syndrome de novo 14 35013386 ACATTGTTTATGTGATGGATGCCTCCATTGGGCAGGCTTGTGAAGCCCAGGCTAAGGCTTT 193929358 34045 NM_000525.3(KCNJ11):c.1001G>A (p.Gly334Asp) KCNJ11 Jul 05, 2011 MedGen:C1833104,OMIM:606176,Orphanet:ORPHA99885 Permanent neonatal diabetes mellitus not provided 11 17387091 GACGTTACTCTGTGGACTACTCCAAGTTTGGCAACACCGTCAAAGTGCCCACACCACTCTG 868256749 107255 NM_173812.4(DPY19L2):c.1218+1G>A DPY19L2 Mar 10, 2014 MedGen:C3151407,OMIM:613958 Spermatogenic failure 9 germline 12 63617303 TATTATTCTTCATCTTTGTTAATGACGTGGGTAAGTGTTTAGTTCATAAAGTTGGTTTTTT 587779654 107143 NM_000090.3(COL3A1):c.2870G>A (p.Gly957Asp) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 189004303 TTGGGATTGCTGGGATCACTGGAGCACGGGGTCTTGCAGGACCACCAGGCATGCCAGGTCC 372128852 260673 NM_000050.4(ASS1):c.970+5G>A ASS1 Jul 14, 2017 MedGen:C0175683,OMIM:215700,Orphanet:ORPHA187;MedGen:C0175683,OMIM:215700,Orphanet:ORPHA187 Citrullinemia type I;Citrullinemia type I germline 9 130489469 GAAATTTGCTGAGCTGGTGTATACCGGTGCGTAAGACTCTATGGCTGCCCCCTCTAACCGC 397507510 48965 NM_002834.4(PTPN11):c.181G>A (p.Asp61Asn) PTPN11 Aug 01, 2017 MedGen:CN074218,OMIM:151100;MedGen:C0041409,OMIM:163950;MedGen:C1860991,OMIM:609942;MedGen:CN166718,Orphanet:ORPHA98733;MedGen:CN517202 LEOPARD syndrome 1;Noonan syndrome 1;Noonan syndrome 3;Rasopathy;not provided germline 12 112450361 GTCACCCACATCAAGATTCAGAACACTGGTGATTACTATGACCTGTATGGAGGGGAGAAAT 758609113 211421 NM_000507.3(FBP1):c.355G>A (p.Asp119Asn) FBP1 Mar 27, 2017 MedGen:C0016756,OMIM:229700,Orphanet:ORPHA348,SNOMED CT:28183005;MedGen:CN517202 Fructose-biphosphatase deficiency;not provided germline;not applicable 9 94617839 TGTGCTCAGGGTAAATATGTGGTCTGTTTTGATCCCCTTGATGGATCTTCCAACATCGATT 121908723 17007 NM_000022.3(ADA):c.646G>A (p.Gly216Arg) ADA Aug 27, 2017 MedGen:C1863236,OMIM:102700,Orphanet:ORPHA277;MedGen:CN517202 Severe combined immunodeficiency due to ADA deficiency;not provided germline;unknown 20 44623039 AAGAGCGGCATTCACCGTACTGTCCACGCCGGGGAGGTGGGCTCGGCCGAAGTAGTAAAAG -1 482137 NM_000088.3(COL1A1):c.3207+1G>A COL1A1 Jan 10, 2018 MedGen:CN517202 not provided germline 17 50188529 GCTGGCAAGAGTGGTGATCGTGGTGAGACTGTAAGTAGCTGGGCTCCAGTTCCCTGTACCT 137853579 29853 NM_001558.3(IL10RA):c.421G>A (p.Gly141Arg) IL10RA Nov 19, 2009 MedGen:C4016214 Inflammatory bowel disease 28 germline 11 117993294 AACCTAGAGATCCACAATGGCTTCATCCTCGGGAAGATTCAGCTACCCAGGCCCAAGATGG 1114167310 247346 NM_005267.4(GJA8):c.484G>A (p.Glu162Lys) GJA8 Jul 29, 2016 Human Phenotype Ontology:HP:0000519,MedGen:C1842324 Congenital cataract inherited 1 147908439 ATCTGCCACATCATCTTCAAGACCCTCTTTGAAGTGGGCTTCATCGTGGGCCACTACTTCC 199469631 106427 NM_017415.2(KLHL3):c.1295G>A (p.Ser432Asn) KLHL3 - Gene:7830,MedGen:C1449844,OMIM:145260,Orphanet:ORPHA757,SNOMED CT:15689008 Pseudohypoaldosteronism, type 2 germline 5 137637320 TCTTTGTGGCCCCGATGAACACGCGGCGGAGCAGTGTGGGTGTGGGCGTTGTGGAGGGTAA 398123169 98374 NM_000152.4(GAA):c.1465G>A (p.Asp489Asn) GAA Jun 30, 2017 MedGen:C0017921,OMIM:232300,Orphanet:ORPHA365,SNOMED CT:124462004,SNOMED CT:237967002 Glycogen storage disease, type II germline 17 80110754 CAGGTATGGCCCGGGTCCACTGCCTTCCCCGACTTCACCAACCCCACAGCCCTGGCCTGGT 886037955 249190 NM_206876.1(PPP1CB):c.820G>A (p.Glu274Lys) PPP1CB May 31, 2017 MedGen:CN244048,OMIM:617506;MedGen:CN517202 Noonan syndrome-like disorder with loose anagen hair 2;not provided germline 2 28793938 ACCTTATTTTCAGCCCCAAATTACTGTGGCGAGTTTGATAATGCTGGTGGAATGATGAGTG 36211723 45266 NM_000256.3(MYBPC3):c.2308G>A (p.Asp770Asn) MYBPC3 Oct 12, 2017 MedGen:CN230736;MedGen:C1861862,OMIM:115197;MedGen:C1861862,OMIM:115197;Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569;MedGen:C3715165,OMIM:615396;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005 Cardiovascular phenotype;Familial hypertrophic cardiomyopathy 4;Familial hypertrophic cardiomyopathy 4;Hypertrophic cardiomyopathy;Left ventricular noncompaction 10;Primary familial hypertrophic cardiomyopathy germline;unknown 11 47338520 GACCAGGTCAACCTCACAGTCAAGGTCATCGGTGAGGCCGGCCGGGGTCCAAGCTGGAGAA 281875318 38818 NM_006907.3(PYCR1):c.769G>A (p.Ala257Thr) PYCR1 Sep 01, 2009 MedGen:C3280799,OMIM:614438,Orphanet:ORPHA293633;MedGen:CN517202 Autosomal recessive cutis laxa type 3B;not provided germline 17 81934354 AGTGGGGGCTTCCGCTCCCTGCTCATCAACGCTGTGGAGGCCTCCTGCATCCGCACACGGT 34716011 47251 NM_000518.4(HBB):c.48G>A (p.Trp16Ter) HBB Aug 12, 2017 MedGen:C0005283,OMIM:613985,Orphanet:ORPHA848,SNOMED CT:65959000;MedGen:CN517202 beta Thalassemia;not provided germline 11 5226974 TGAGGAGAAGTCTGCCGTTACTGCCCTGTGGGGCAAGGTGAACGTGGATGAAGTTGGTGGT 587776989 70463 NM_001142864.3(PIEZO1):c.6058G>A (p.Ala2020Thr) PIEZO1 Feb 19, 2016 Gene:10774,MedGen:C0272051,OMIM:194380,Orphanet:ORPHA3202,SNOMED CT:87994004;MedGen:CN517202 Xerocytosis;not provided germline 16 88720175 ATCCAGTTCAGTACCATGGTGGTTGACCGCGCCCTCTACCTGCGCAAGACCGTGCTGGGCA 67879854 441976 NM_000088.3(COL1A1):c.2362G>A (p.Gly788Ser) COL1A1 Jan 17, 2017 MedGen:CN517202 not provided germline 17 50190578 CCTTGCTCTCAGGGTGAAAGTGGTCCCAGCGGCCCTGCTGGTCCCACTGGAGCTCGTGGTG 121918449 28601 NM_000212.2(ITGB3):c.1199G>A (p.Cys400Tyr) ITGB3 Aug 04, 2016 MedGen:C0040015,OMIM:273800,Orphanet:ORPHA849,SNOMED CT:32942005 Glanzmann thrombasthenia germline 17 47291027 AAGAGTTGTCTCTATCCTTCAATGCCACCTGCCTCAACAATGAGGTCATCCCTGGCCTCAA 113994095 28535 NM_002693.2(POLG):c.1399G>A (p.Ala467Thr) POLG Oct 19, 2017 MedGen:C1834846,OMIM:157640;MedGen:C1834846,OMIM:157640;MedGen:C1850303,OMIM:258450,Orphanet:ORPHA254886;MedGen:C1850303,OMIM:258450,Orphanet:ORPHA254886;MedGen:C0872218,OMIM:603041,Orphanet:ORPHA298;MedGen:C3150914,OMIM:613662;MedGen:C0751651,Orphanet:ORPHA68380;MedGen:C1843852;MedGen:CN239393;MedGen:C0205710,OMIM:203700,Orphanet:ORPHA726,SNOMED CT:20415001;MedGen:C0205710,OMIM:203700,Orphanet:ORPHA726,SNOMED CT:20415001;MedGen:C1843851,OMIM:607459,Orphanet:ORPHA70595;MedGen:C1843851,OMIM:607459,Orphanet:ORPHA70595;MedGen:CN517202 Autosomal dominant progressive external ophthalmoplegia with mitochondrial DNA deletions 1;Autosomal dominant progressive external ophthalmoplegia with mitochondrial DNA deletions 1;Cerebellar ataxia infantile with progressive external ophthalmoplegia;Cerebellar ataxia infantile with progressive external ophthalmoplegia;Mitochondrial DNA depletion syndrome 1 (MNGIE type);Mitochondrial DNA depletion syndrome 4B, MNGIE type;Mitochondrial diseases;Myoclonic epilepsy myopathy sensory ataxia;POLG-Related Spectrum Disorders;Progressive sclerosing poliodystrophy;Progressive sclerosing poliodystrophy;Sensory ataxic neuropathy, dysarthria, and ophthalmoparesis;Sensory ataxic neuropathy, dysarthria, and ophthalmoparesis;not provided germline;maternal;unknown 15 89327201 CGGGAGATGAAGAAGTCGTTGATGGATCTGGCCAATGATGCCTGCCAGCTGCTCTCAGGAG 397516285 52316 NM_000260.3(MYO7A):c.141G>A (p.Trp47Ter) MYO7A May 14, 2012 MedGen:C1568247,OMIM:276900,Orphanet:ORPHA231169 Usher syndrome, type 1 germline 11 77147806 CTGACGTTCTGGCTCCCCGCAGGAACACTGGATCTCTCCGCAGAACGCAACGCACATCAAG 207459997 24717 m.15615G>A MT-CYB Sep 30, 1999 MedGen:C0241885 Exercise intolerance germline MT 15615 TTCTCCGATCCGTCCCTAACAAACTAGGAGGCGTCCTTGCCCTATTACTATCCATCCTCAT 387907062 39899 NM_001127464.2(ZNF469):c.10016G>A (p.Cys3339Tyr) ZNF469 Jan 01, 2010 MedGen:C0268344,OMIM:229200,Orphanet:ORPHA90354,SNOMED CT:31798004 Corneal fragility keratoglobus, blue sclerae AND joint hypermobility germline 16 88437570 CGGTGCACAGCCCGCAGCGCGTCTACCTGTGCCCCCGGTGCCCCCGGGTCTACCCCGAGCA 377767353 46838 NM_005359.5(SMAD4):c.1139G>A (p.Arg380Lys) SMAD4 Dec 04, 2012 MedGen:C0345893,OMIM:174900,Orphanet:ORPHA329971,SNOMED CT:9273005 Juvenile polyposis syndrome not provided 18 51065606 TCCACAGGACAGAAGCCATTGAGAGAGCAAGGTATTGATTGTATAGTCAGATAGTTACTTT 367543264 36621 NM_000155.3(GALT):c.904+5G>A GALT Dec 04, 2012 MedGen:C0268151,OMIM:230400,Orphanet:ORPHA79239,SNOMED CT:124354006 Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase not provided 9 34649086 CTTTCCCTACTCCATGGGCTGGCATGGTGAGGCTTTTCAAGTACCTATATTTAGCCCCAAC 397514350 36333 NM_000060.4(BTD):c.298G>A (p.Ala100Thr) BTD Dec 04, 2012 MedGen:C0220754,OMIM:253260,Orphanet:ORPHA79241,SNOMED CT:8808004 Biotinidase deficiency not provided 3 15635677 CTTGACATCTATGAACAGCAAGTGATGACTGCAGCCCAAAAGGCAAGAATGCTCCTCGGAA 61751281 104720 NM_000329.2(RPE65):c.118G>A (p.Gly40Ser) RPE65 Aug 12, 2016 Human Phenotype Ontology:HP:0000547,MeSH:D012174,MedGen:C0035334,OMIM:268000,Orphanet:ORPHA791,SNOMED CT:28835009;MedGen:CN517202 Retinitis pigmentosa;not provided germline 1 68446837 ATCACAGGCAGGATCCCCCTCTGGCTCACCGGCAGTCTCCTTCGATGTGGGCCAGGACTCT 121434419 21597 NM_001203.2(BMPR1B):c.1457G>A (p.Arg486Gln) BMPR1B Dec 01, 2006 Human Phenotype Ontology:HP:0009372,MedGen:C1832702,OMIM:112600,Orphanet:ORPHA93396 Type A2 brachydactyly germline 4 95154621 ACAATCCTGCATCAAGGCTGACAGCCCTGCGGGTTAAGAAAACACTTGCCAAAATGTCAGA -1 452054 NM_032638.4(GATA2):c.1187G>A (p.Arg396Gln) GATA2 Jun 30, 2017 MedGen:C3280030,OMIM:614172,Orphanet:ORPHA228423;MedGen:C3279664,OMIM:614038,Orphanet:ORPHA3226 Dendritic cell, monocyte, B lymphocyte, and natural killer lymphocyte deficiency;Lymphedema, primary, with myelodysplasia germline 3 128481275 TGACCATGAAGAAGGAAGGGATCCAGACTCGGAACCGGAAGATGTCCAACAAGTCCAAGAA 587781208 165763 NM_130838.1(UBE3A):c.1730G>A (p.Trp577Ter) UBE3A Feb 14, 2014 MedGen:C0162635,OMIM:105830,Orphanet:ORPHA72,SNOMED CT:76880004 Angelman syndrome germline 15 25356860 TCACATACGATGAATCTACAAAATTGTTTTGGTTTAATCCATCTTCTTTTGAAACTGAGGG 121909656 31306 NM_182925.4(FLT4):c.3316G>A (p.Glu1106Lys) FLT4 Jan 01, 2006 MedGen:C1704423,OMIM:153100,Orphanet:ORPHA79452,SNOMED CT:399889006 Hereditary lymphedema type I germline 5 180614083 GACGTGTGGTCCTTTGGGGTGCTTCTCTGGGAGATCTTCTCTCTGGGTGAGTGCAGGATGG -1 442651 NM_000702.3(ATP1A2):c.1882G>A (p.Val628Met) ATP1A2 Mar 13, 2017 MedGen:CN517202 not provided germline 1 160134538 CCTATCACAGCCAAGGCCATTGCCAAAGGCGTGGGCATCATATCAGAGGGTAACGAGACTG 137853588 28665 NM_000294.2(PHKG2):c.566G>A (p.Gly189Glu) PHKG2 Nov 01, 1996 MedGen:C2751643,OMIM:613027,Orphanet:ORPHA264580 Glycogen storage disease IXc germline 16 30756191 ATCTTGGTCCTCTCTCCCCAGAGTTGTGTGGGACCCCAGGGTATCTAGCGCCAGAGATCCT 587780031 133196 NM_000465.3(BARD1):c.3G>A (p.Met1Ile) BARD1 Nov 05, 2013 MedGen:CN517202 not provided germline 2 214809567 GAGGAGCCTTTCATCCGAAGGCGGGACGATGCCGGATAATCGGCAGCCGAGGAACCGGCAG 727504247 172354 NM_001001430.2(TNNT2):c.860G>A (p.Trp287Ter) TNNT2 May 16, 2017 MedGen:C1861864,OMIM:115195;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Familial hypertrophic cardiomyopathy 2;Primary familial hypertrophic cardiomyopathy;not provided germline 1 201359217 CCCGCGGGAAGGCTAAAGTCACCGGGCGCTGGAAATAGAGCCTGGCCTCCTTCACCAAAGA 766294940 359102 NM_002936.4(RNASEH1):c.424G>A (p.Val142Ile) RNASEH1 Jul 29, 2015 MedGen:C4225312,OMIM:616479,Orphanet:ORPHA329336 Progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal recessive 2 germline 2 3550458 CTTCCTTTTCCCACAGGAGACTTCGTCGTCGTCTACACTGATGGCTGCTGCTCCAGTAATG -1 440053 NM_002296.3(LBR):c.1174G>A (p.Gly392Arg) LBR Jun 01, 2017 MedGen:C0265275,Orphanet:ORPHA474,SNOMED CT:75049004 Jeune thoracic dystrophy maternal 1 225411351 GATCTCAAATACTTTTGTGAATTGCGCCCCGGATTGATTGGATGGGTATGTCTGGTTTTTT 104894365 27628 NM_004985.4(KRAS):c.40G>A (p.Val14Ile) KRAS Aug 29, 2017 Human Phenotype Ontology:HP:0012114,MedGen:C0476089,OMIM:608089,SNOMED CT:254878006;MeSH:D009634,MedGen:C0028326,Orphanet:ORPHA648,SNOMED CT:205824006;MedGen:C1860991,OMIM:609942;MedGen:CN166718,Orphanet:ORPHA98733;MedGen:CN517202 Endometrial carcinoma;Noonan syndrome;Noonan syndrome 3;Rasopathy;not provided germline;somatic 12 25245345 TATAAACTTGTGGTAGTTGGAGCTGGTGGCGTAGGCAAGAGTGCCTTGACGATACAGCTAA -1 481864 NM_000494.3(COL17A1):c.662G>A (p.Trp221Ter) COL17A1 Dec 05, 2017 MedGen:CN517202 not provided germline 10 104064542 TCCTGGATGCCAACCTTCCCTCCCATGTGTGGTCCTCCACCCTGCCCGCGGGGTCCTCCAT 140599 465123 NM_000138.4(FBN1):c.3458G>A (p.Cys1153Tyr) FBN1 Jan 27, 2017 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006;MedGen:CN118826,Orphanet:ORPHA91387 Marfan syndrome;Thoracic aortic aneurysm and aortic dissection germline 15 48487317 GCCATCAGCTGTCCCCCAACATCTCCGCGTGTATCGGTAAGGAGAAAGACTTTCACACCAT 72653794 377106 NM_001171.5(ABCC6):c.2420G>A (p.Arg807Gln) ABCC6 Sep 06, 2016 MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005;MedGen:CN517202 Pseudoxanthoma elasticum;not provided germline 16 16177622 GTAACTTCTACCCCTTCCCTGCCCAGACACGGATTCTCGTGACGCACGCACTCCACATCCT 121912798 32595 NM_001822.5(CHN1):c.937G>A (p.Glu313Lys) CHN1 Aug 08, 2008 MedGen:C0751083,OMIM:604356 Duane syndrome type 2 germline 2 174811538 TACCGAGTATCAGGATTTAGTGACCTAATTGAAGATGTCAAGATGGCTTTCGACAGAGGTA 121913535 362847 NM_033360.3(KRAS):c.37G>A (p.Gly13Ser) KRAS Jul 14, 2015 MeSH:D015179,MedGen:CN236642;Human Phenotype Ontology:HP:0100031,MeSH:D013964,MedGen:C0040136,Orphanet:ORPHA100087;Human Phenotype Ontology:HP:0030358,MeSH:D002289,MedGen:C0007131,SNOMED CT:254637007 Colorectal Neoplasms;Neoplasm of the thyroid gland;Non-small cell lung cancer somatic 12 25245348 GAATATAAACTTGTGGTAGTTGGAGCTGGTGGCGTAGGCAAGAGTGCCTTGACGATACAGC 1057517769 359954 NM_000256.3(MYBPC3):c.3617G>A (p.Gly1206Asp) MYBPC3 Aug 12, 2015 MedGen:CN517202 not provided germline 11 47332576 ACACTGCTATGCTCTGCTGTGCTGTCCGGGGTAGCCCCAAGGTAGGGAACTTTAGGCGCTG 137854484 31504 NM_000138.4(FBN1):c.3257G>A (p.Cys1086Tyr) FBN1 Apr 15, 2007 MedGen:C4016054 Marfan syndrome, neonatal unknown 15 48488193 TATCTCCTGACCTCTGTGGCAGAGGCCAGTGTGTGAACACCCCTGGGGACTTTGAATGCAA 28939081 20198 NM_020632.2(ATP6V0A4):c.2420G>A (p.Arg807Gln) ATP6V0A4 Nov 01, 2002 MedGen:C1864499 Renal tubular acidosis, distal, autosomal recessive, with late-onset sensorineural hearing loss germline 7 138709633 AGGGCCTCTCTGCTTTCCTGCACGCCCTGCGACTGCACTGGTAAGGATGGTTGTCCCCTGG 111033761 45901 NM_000155.3(GALT):c.777G>A (p.Arg259=) GALT Dec 04, 2012 MedGen:C0268151,OMIM:230400,Orphanet:ORPHA79239,SNOMED CT:124354006 Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase not provided 9 34648851 GCCCTACCAGACACTGCTGCTGCCCCGTCGGCATGTGCGGCGGCTACCTGAGCTGACCCCT 766951273 237784 NM_012102.3(RERE):c.3466G>A (p.Gly1156Arg) RERE Jan 08, 2018 MedGen:C4310772,OMIM:616975 Neurodevelopmental disorder with or without anomalies of the brain, eye, or heart germline 1 8359916 CGGACAGACCTGTACTTCATGCCTCTGGCCGGGTCCAAGCTGGCCAAGAAGAGGGAGGAGG 747009288 481828 NM_016023.3(OTUD6B):c.887+1G>A OTUD6B Jan 22, 2018 MedGen:CN517202 not provided germline 8 91084115 AGAATATTCAAAAAAACCACTAATACTTGTGTAAGTACCTAGACATTTTTACTGTTTTATT 121918695 27594 NM_001128177.1(THRB):c.947G>A (p.Arg316His) THRB May 01, 1994 MedGen:C1840364,OMIM:145650,Orphanet:ORPHA165994 Thyroid hormone resistance, selective pituitary germline 3 24127696 AAGGCTGCTGCATGGAGATCATGTCCCTTCGCGCTGCTGTGCGCTATGACCCAGAAAGTGA 794729216 198610 NM_002977.3(SCN9A):c.2690G>A (p.Trp897Ter) SCN9A Nov 26, 2013 MedGen:C1855739,OMIM:243000,Orphanet:ORPHA88642 Indifference to pain, congenital, autosomal recessive germline 2 166277134 AGATCAATGATGACTGTACGCTCCCACGGTGGCACATGAACGACTTCTTCCACTCCTTCCT 727504317 49251 NM_002755.3(MAP2K1):c.199G>A (p.Asp67Asn) MAP2K1 Sep 25, 2017 MedGen:C1275081,Orphanet:ORPHA1340,SNOMED CT:403770008;MedGen:C3809006,OMIM:615279;Human Phenotype Ontology:HP:0002861,MeSH:D008545,MedGen:C0025202,SNOMED CT:2092003;Human Phenotype Ontology:HP:0030358,MeSH:D002289,MedGen:C0007131,SNOMED CT:254637007;MedGen:CN166718,Orphanet:ORPHA98733;MedGen:CN517202 Cardio-facio-cutaneous syndrome;Cardiofaciocutaneous syndrome 3;Malignant melanoma;Non-small cell lung cancer;Rasopathy;not provided germline;somatic 15 66435145 AAGCAGAAGGTGGGAGAACTGAAGGATGACGACTTTGAGAAGATCAGTGAGCTGGGGGCTG 786202724 182676 NM_001127500.2(MET):c.3328G>A (p.Val1110Ile) MET May 13, 2016 Human Phenotype Ontology:HP:0030731,MeSH:D002277,MedGen:C0007097;MedGen:C0027672,SNOMED CT:699346009;MeSH:D009369,MedGen:C0027651,SNOMED CT:108369006 Carcinoma;Hereditary cancer-predisposing syndrome;Neoplasm germline;somatic 7 116777403 TCTTTCTTTTGCACAGGGCATTTTGGTTGTGTATATCATGGGACTTTGTTGGACAATGATG 72559715 429199 NM_000352.4(ABCC8):c.4432G>A (p.Gly1478Arg) ABCC8 Jul 21, 2016 MedGen:C1257959,OMIM:256450,SNOMED CT:360339005 Persistent hyperinsulinemic hypoglycemia of infancy germline 11 17394379 CTGTTTTCAGATGCCATCATCACAGAAGGCGGGGAGAATTTCAGCCAGGGACAGAGGCAGC 387906521 28125 NM_000321.2(RB1):c.-198G>A RB1 Jun 05, 2017 MedGen:C0027672,SNOMED CT:699346009;Human Phenotype Ontology:HP:0009919,MeSH:D012175,MedGen:C0035335,OMIM:180200,Orphanet:ORPHA790 Hereditary cancer-predisposing syndrome;Retinoblastoma germline 13 48303715 CGGGAGCCTCGCGGACGTGACGCCGCGGGCGGAAGTGACGTTTTCCCGCGGTTGGACGCGG 199473554 78675 NM_198056.2(SCN5A):c.311G>A (p.Arg104Gln) SCN5A May 22, 2016 MedGen:C1142166,Orphanet:ORPHA130,SNOMED CT:418818005;MedGen:CN517202 Brugada syndrome;not provided germline 3 38630392 TCGTACTGAATAAAGGCAAGACCATCTTCCGGTTCAGTGCCACCAACGCCTTGTATGTCCT 748840480 183113 NM_000051.3(ATM):c.901+1G>A ATM May 18, 2017 MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0004135,OMIM:208900,Orphanet:ORPHA100,SNOMED CT:68504005;MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C0027672,SNOMED CT:699346009 Ataxia-telangiectasia syndrome;Ataxia-telangiectasia syndrome;Familial cancer of breast;Hereditary cancer-predisposing syndrome germline;unknown 11 108245027 ATCCGAAAGGAGCCAAAACCCAAGAAAAAGGTATAAAGGAAATGTTTACTGTTTTGAATTT 104894661 18301 NM_000529.2(MC2R):c.319G>A (p.Asp107Asn) MC2R Apr 01, 1996 MedGen:C4049650,OMIM:202200 ACTH resistance germline 18 13885200 AGTTTTGAAACCACAGCCGATGACATCATCGACTCCCTGTTTGTCCTCTCCCTGCTTGGCT 864621964 24260 NM_000435.2(NOTCH3):c.187G>A (p.Ala63Thr) NOTCH3 Nov 22, 1997 MedGen:C1272305,OMIM:125310,SNOMED CT:390936003 Cerebral autosomal dominant arteriopathy with subcortical infarcts and leukoencephalopathy germline 19 15197510 GGTCGTTGCACCCAGCTGCCCTCCCGGGAGGCTGCCTGCCTGTGAGTGCCTGGCTCAGAGC 371100799 187220 NM_012130.3(CLDN14):c.167G>A (p.Trp56Ter) CLDN14 Feb 01, 2012 MedGen:C3279660,OMIM:614035 Deafness, autosomal recessive 29 germline 21 36461529 ACCTGAAAGGGCTCTGGATGGAGTGTGTGTGGCACAGCACAGGCATCTACCAGTGCCAGAT 587784289 169376 NM_000430.3(PAFAH1B1):c.851G>A (p.Trp284Ter) PAFAH1B1 Feb 08, 2013 MedGen:C1843916,OMIM:607432 Lissencephaly 1 germline 17 2674239 AGCATGAGCATGTGGTAGAATGCATTTCCTGGGCTCCAGAAAGCTCATATTCCTCCATCTC 864309501 215001 NM_007126.3(VCP):c.553G>A (p.Glu185Lys) VCP Nov 01, 2014 MedGen:C4225244,OMIM:616687,Orphanet:ORPHA435387 Charcot-Marie-Tooth disease, axonal, type 2y germline 9 35065274 ATTGTTGCTCCAGACACAGTGATCCACTGCGAAGGGGAGCCTATCAAACGAGAGGTGAGTT 786205056 16258 NM_022089.3(ATP13A2):c.1306+5G>A ATP13A2 Aug 26, 2011 MedGen:C1847640,OMIM:606693,Orphanet:ORPHA306674 Parkinson disease 9 germline 1 16996381 GTTTGTGGCTGCCCTCTCTGTCCTGGGTGAGTGGCCCCCTGCACCCTCCTCTGCCCATAGC 121913624 29126 NM_000257.3(MYH7):c.1208G>A (p.Arg403Gln) MYH7 Aug 01, 2017 MedGen:C3495498,OMIM:192600;Human Phenotype Ontology:HP:0001639,MedGen:C0007194,Orphanet:ORPHA217569;MedGen:C0949658,Orphanet:ORPHA155,SNOMED CT:83978005;MedGen:CN517202 Familial hypertrophic cardiomyopathy 1;Hypertrophic cardiomyopathy;Primary familial hypertrophic cardiomyopathy;not provided germline 14 23429278 CCGACCTGCTCAAGGGGCTGTGCCACCCTCGGGTGAAAGTGGGCAATGAGTACGTCACCAA 387906754 39031 NM_139125.3(MASP1):c.1997G>A (p.Gly666Glu) MASP1 Mar 01, 2011 MedGen:C0796059,OMIM:257920 Michels syndrome germline 3 187235874 GCAAAGACACGTGCCTTGGAGATAGCGGTGGGGCCTTTGTCATCTTTGATGACTTGAGCCA 587777418 137061 NM_139242.3(MTFMT):c.878G>A (p.Ser293Asn) MTFMT Mar 01, 2014 MedGen:C3554182,OMIM:614947,Orphanet:ORPHA319524 Combined oxidative phosphorylation deficiency 15 germline 15 65006127 TTAAACTTCTGGATTTGGTAGAAGTTAACAGTTCAGTCCTTGCTGGTACTAACTTTTGAAT 797044858 205338 NM_003159.2(CDKL5):c.514G>A (p.Val172Ile) CDKL5 Sep 30, 2013 MeSH:D030342,MedGen:C0950123 Inborn genetic diseases germline X 18584313 GAAGGCAATAATGCTAATTACACAGAGTACGTTGCCACCAGATGGTATCGGTCCCCAGAAC 1057518416 360548 NM_000116.4(TAZ):c.699+1G>A TAZ Nov 16, 2016 MedGen:CN517202 not provided germline X 154420265 AGTCCGCCCTACTTCCCCCGCTTTGGACAGGTGGGTGGGGACTGCTGACCTTCGGCTGTCT 397515435 48674 NM_194248.2(OTOF):c.1621G>A (p.Gly541Ser) OTOF Jul 01, 2017 MedGen:C1832828,OMIM:601071 Deafness, autosomal recessive 9 germline 2 26480968 ACACTGGGCCCAGCCTGGGTGAACATGTACGGCTCCACACGTAACTACACGCTGCTGGATG 199472720 67769 NM_000218.2(KCNQ1):c.776G>A (p.Arg259His) KCNQ1 Aug 18, 2017 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MeSH:D008133,MedGen:C0023976,SNOMED CT:9651007;MedGen:CN517202 Congenital long QT syndrome;Long QT syndrome;not provided germline 11 2572105 GGCTCCTGGGCTCCGTGGTCTTCATCCACCGCCAGGTGGGTGGCCCGGGTTAGGGGTGCGG 121434263 18310 NM_024529.4(CDC73):c.128G>A (p.Trp43Ter) CDC73 Dec 01, 2002 Human Phenotype Ontology:HP:0006780,MedGen:C0687150,OMIM:608266,Orphanet:ORPHA143,SNOMED CT:255037004 Parathyroid carcinoma somatic 1 193122328 CCAAGAATGTGAAGACCAACTATGTTGTTTGGGGGTAAGTCCGGCATGGCTGTGGCCCAGG 768996179 362490 NM_004181.4(UCHL1):c.533G>A (p.Arg178Gln) UCHL1 Jan 24, 2018 MedGen:C3809665,OMIM:615491,Orphanet:ORPHA352654 Spastic paraplegia 79, autosomal recessive germline 4 41264109 ACATGCCTGGCTTCTTTGTTACAGATGGACGAATGCCTTTTCCGGTGAACCATGGCGCCAG 370474706 223746 NM_000092.4(COL4A4):c.2986G>A (p.Gly996Arg) COL4A4 Feb 02, 2016 MedGen:C0241908,OMIM:141200,SNOMED CT:236421001 Benign familial hematuria de novo 2 227051141 CCAACTTCATCAGGTGATAAAGGAACTCCCGGGATGCAAGGGAGAAGAGGAGAGCCGGGAA -1 430381 NM_032957.4(RTEL1):c.1207+1G>A RTEL1 May 11, 2017 MedGen:C0265965,Orphanet:ORPHA1775,SNOMED CT:74911008 Dyskeratosis congenita germline 20 63679947 TGGACCAGATCATCCAGCACCTGGCAGGACGTGAGTGCTGGCACGGGGTCTTTGGTGCGGG 137853002 19974 NM_033056.3(PCDH15):c.785G>A (p.Gly262Asp) PCDH15 Dec 15, 2003 MedGen:C1836027,OMIM:609533 Deafness, autosomal recessive 23 germline 10 54317362 CAGTGGATGTTCTGGATGGAGATGACTTGGGTCCAATGTTTCTTCCTTGTGTCCTTGTGCC 137853112 16047 NM_001031710.2(KLHL7):c.449G>A (p.Ser150Asn) KLHL7 Jun 01, 2009 MedGen:C2751986,OMIM:612943 Retinitis pigmentosa 42 germline 7 23140775 CTTTTATTTTCTTTCTGTGTTTAGGTATAAGTGTGCTAGCGGAGTGTCTAGATTGTCCTGA 104894129 27501 NM_003289.3(TPM2):c.349G>A (p.Glu117Lys) TPM2 Feb 28, 2017 MedGen:C0220662,OMIM:108120;MedGen:C1836447,OMIM:609285;MedGen:CN517202 Arthrogryposis multiplex congenita distal type 1;Nemaline myopathy 4;not provided de novo;germline 9 35685672 GCTACAGCCCTGCAGAAGCTGGAGGAGGCCGAGAAGGCGGCTGATGAGAGCGAGAGGTGGT 1131692037 423091 NM_023936.1(MRPS34):c.37G>A (p.Glu13Lys) MRPS34 Sep 16, 2017 MedGen:CN469327,OMIM:617664;MedGen:C0023264,OMIM:256000,Orphanet:ORPHA506,SNOMED CT:29570005 COMBINED OXIDATIVE PHOSPHORYLATION DEFICIENCY 32;Leigh syndrome germline;not applicable 16 1773083 CGGAAGAAGGTGCGTCCGCGGCTGATCGCGGAGCTGGCCCGCCGCGTGCGCGCCCTGCGGG 777162250 212124 NM_024753.4(TTC21B):c.684G>A (p.Trp228Ter) TTC21B Aug 31, 2015 MedGen:C0265275,Orphanet:ORPHA474,SNOMED CT:75049004 Jeune thoracic dystrophy germline 2 165941053 AATGAAATTACAACTAGCCTTGCAGGATTGGGACCAGACAGTTGAGACAGCACAAAGGTTA 121434246 18379 NM_000348.3(SRD5A2):c.344G>A (p.Gly115Asp) SRD5A2 Jun 12, 2017 MedGen:C0268297,OMIM:264600,Orphanet:ORPHA753,SNOMED CT:57514000 3-Oxo-5 alpha-steroid delta 4-dehydrogenase deficiency germline 2 31533704 GGCCTTATCCAGCTATACTCATTCTCAGAGGCACTGCCTTCTGCACTGGAAATGGAGTCCT 104894889 25992 NM_000475.4(NR0B1):c.704G>A (p.Trp235Ter) NR0B1 Dec 15, 1994 MedGen:C0342482,OMIM:300200,SNOMED CT:237764004 Congenital adrenal hypoplasia, X-linked germline X 30308660 CGGCTCCGGAGGAGCGGCCGAGGGCCCCCTGGTGGGACACCTCCTCTGGTGCGCTGCGGCC 387907018 39759 NM_153609.3(TMPRSS6):c.1564G>A (p.Glu522Lys) TMPRSS6 May 28, 2009 Human Phenotype Ontology:HP:0001935,MedGen:C0085576,OMIM:206200,Orphanet:ORPHA209981,SNOMED CT:234349007 Microcytic anemia germline 22 37073550 GGGCAGCCTGATTGTCTCAACGGCAGCGACGAAGAGCAGTGCCAGGAAGGTAGGGCAGGCC -1 445275 NM_130838.2(UBE3A):c.1548+1G>A UBE3A Mar 08, 2016 MedGen:CN517202 not provided germline 15 25370565 GACCATATCATAGATGATGCACTTGTCCGGGTAAGTTGGGCTGCTAGATTAAAAACCTAAT 121917842 23142 NM_006261.4(PROP1):c.218G>A (p.Arg73His) PROP1 Sep 01, 2001 MedGen:C0878683,OMIM:262600 Pituitary hormone deficiency, combined 2 germline 5 177994230 GGGGCCGCCCGCACTCCCGGCGCCGCCACCGCACCACCTTCAGCCCAGTGCAGTTGGAACA 386134200 36715 NM_003060.3(SLC22A5):c.652+1G>A SLC22A5 Apr 24, 2017 MedGen:C0342788,OMIM:212140,Orphanet:ORPHA158,SNOMED CT:21764004 Renal carnitine transport defect germline 5 132384302 TCTCCAACTATGTGGCAGCATTTGTCCTGGGTATGGCCATCAGGTTGGAGTTGAGTACTTG 768795323 434147 NM_174936.3(PCSK9):c.658G>A (p.Ala220Thr) PCSK9 - MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 1 55052650 TCTCATGTGGTCCTTGTGTTCGTCGAGCAGGCCAGCAAGTGTGACAGTCATGGCACCCACC 121918011 28714 NM_000478.5(ALPL):c.407G>A (p.Arg136His) ALPL Jun 14, 2016 MedGen:C0220743,OMIM:241510,SNOMED CT:30174008;MedGen:C0020630,Orphanet:ORPHA436;Human Phenotype Ontology:HP:0003239,MedGen:C0268412,OMIM:241500,Orphanet:ORPHA247651,SNOMED CT:55236002 Childhood hypophosphatasia;Hypophosphatasia;Infantile hypophosphatasia germline;unknown 1 21563219 GCACCGTGGGGGTAAGCGCAGCCACTGAGCGTTCCCGGTGCAACACCACCCAGGGGAACGA 121912829 32463 NM_000094.3(COL7A1):c.6118G>A (p.Gly2040Ser) COL7A1 Apr 26, 1994 MedGen:C0432322,OMIM:131750,Orphanet:ORPHA231568 Generalized dominant dystrophic epidermolysis bullosa germline 3 48575401 TCCGGCCTTGCCGGGGAGCCTGGAAAGCCTGGTATTCCCGGGCTCCCAGGCAGGGCTGGGG 74315407 28442 NM_000311.4(PRNP):c.628G>A (p.Val210Ile) PRNP Jun 13, 2017 MedGen:C0162534,Orphanet:ORPHA56970;MedGen:C1864112,OMIM:603218,Orphanet:ORPHA157941;MedGen:C0022336,OMIM:123400,Orphanet:ORPHA204,SNOMED CT:792004 Genetic prion diseases;Huntington disease-like 1;Jakob-Creutzfeldt disease germline 20 4699848 GAGACCGACGTTAAGATGATGGAGCGCGTGGTTGAGCAGATGTGTATCACCCAGTACGAGA 1060501325 391443 NM_001128425.1(MUTYH):c.1281G>A (p.Trp427Ter) MUTYH Oct 17, 2016 MedGen:C1837991,OMIM:608456,Orphanet:ORPHA247798 MYH-associated polyposis germline 1 45331462 CAAGGCCCTGCTGCAGGAACTACAGCGTTGGGCTGGGCCCCTCCCAGCCACGCACCTCCGG 199474674 24596 m.5532G>A MT-TW Jun 01, 2004 MedGen:C4016629 Neurogastrointestinal syndrome, mitochondrial germline MT 5532 ATAATCTTATAGAAATTTAGGTTAAATACAGACCAAGAGCCTTCAAAGCCCTCAGTAAGTT -1 481211 NM_078480.2(PUF60):c.389G>A (p.Arg130His) PUF60 Oct 27, 2017 MedGen:C3810023,OMIM:615583 Verheij syndrome de novo 8 143818494 AGCGGCAGCGGGCGCTGGCCATCATGTGCCGCGTCTACGTGGGCTCTATCTACTATGAGCT 387906949 39563 NM_000520.5(HEXA):c.173G>A (p.Cys58Tyr) HEXA Sep 21, 2011 MedGen:C0039373,OMIM:272800,Orphanet:ORPHA845,SNOMED CT:111385000 Tay-Sachs disease germline 15 72375800 ACGATGTCAGCTCGGCCGCGCAGCCCGGCTGCTCAGTCCTCGACGAGGCCTTCCAGCGCTA 387907023 39778 NM_017837.3(PIGV):c.467G>A (p.Cys156Tyr) PIGV Jul 07, 2016 MedGen:C1855923,OMIM:239300,Orphanet:ORPHA247262;MedGen:CN517202 Hyperphosphatasia with mental retardation syndrome 1;not provided germline 1 26794501 ACCAGTCCTTTTATGCAGCTCTGCTTTTCTGTCTCAGCCCTGCCAATGTCTTCCTGGCAGC 397507997 67306 NM_000059.3(BRCA2):c.8632+1G>A BRCA2 Jul 18, 2017 MedGen:C2675520,OMIM:612555;MedGen:C0027672,SNOMED CT:699346009 Breast-ovarian cancer, familial 2;Hereditary cancer-predisposing syndrome germline 13 32371101 AAATTCAGGAGGAATTTGAAGAACATGAAGGTAAAATTAGTTATATGGTACACATTGTTAT 104894126 27841 NM_004959.4(NR5A1):c.271G>A (p.Gly91Ser) NR5A1 Mar 01, 2007 MedGen:C2751824,OMIM:612965,Orphanet:ORPHA98085 46,XY sex reversal, type 3 germline 9 124500689 ACAGCCGTGCGCGCTGACCGTATGAGGGGTGGCCGGAACAAGTTTGGGCCGATGTACAAGC 483352811 106555 NM_170707.3(LMNA):c.1620G>A (p.Met540Ile) LMNA Apr 30, 2016 MedGen:CN236772 Mandibuloacral dysplasia with type A lipodystrophy germline 1 156137665 GGTTCCATGTCCCCACCAGGAAGTGGCCATGCGCAAGCTGGTGCGCTCAGTGACTGTGGTT 121908510 20697 NM_014946.3(SPAST):c.1343G>A (p.Cys448Tyr) SPAST Nov 01, 1999 MedGen:C1866855,OMIM:182601,Orphanet:ORPHA100985 Spastic paraplegia 4, autosomal dominant germline 2 32136898 TTCCTCTAGATGAAGTTGATAGCCTTTTGTGTGAAAGAAGAGAAGGGGAGCACGATGCTAG 397514666 48778 NM_004625.3(WNT7A):c.214G>A (p.Glu72Lys) WNT7A Feb 01, 2011 MedGen:C1848651,OMIM:276820 Ulna and fibula absence of with severe limb deficiency germline 3 13875031 ATAGGAGAAGGCTCACAAATGGGCCTGGACGAGTGTCAGTTTCAGTTCCGCAATGGCCGCT 879255134 246505 NM_000527.4(LDLR):c.2087G>A (p.Cys696Tyr) LDLR Mar 30, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11120469 AGATCAACCCCCACTCGCCCAAGTTTACCTGCGCCTGCCCGGACGGCATGCTGCTGGCCAG 386134210 36735 NM_003060.3(SLC22A5):c.845G>A (p.Arg282Gln) SLC22A5 May 05, 2016 MedGen:C0342788,OMIM:212140,Orphanet:ORPHA158,SNOMED CT:21764004;MedGen:CN517202 Renal carnitine transport defect;not provided germline 5 132387045 GTACTGCCAGGTTCATCCCTGAGTCCCCCCGATGGCTCATCTCTCAGGGACGATTTGAAGA 72657333 456971 NM_001277115.1(DNAH11):c.5778+1G>A DNAH11 May 22, 2017 Human Phenotype Ontology:HP:0012265,MedGen:C0008780,Orphanet:ORPHA244 Ciliary dyskinesia germline 7 21687256 TTCAACTGTTCAGAGCAAATGGACTACAAAGTAAGTTAGTAAGAGAATAATGTGTAAAACT 1060501054 400627 NM_000138.4(FBN1):c.6695G>A (p.Cys2232Tyr) FBN1 Jul 05, 2016 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006 Marfan syndrome germline 15 48432910 TGAACACTTATGGGTCATATGAATGCAAATGTCCCGTGGGATATGTGCTCAGAGAAGACCG 193922525 44545 NM_000492.3(CFTR):c.4046G>A (p.Gly1349Asp) CFTR Mar 17, 2017 MedGen:C0010674,OMIM:219700,Orphanet:ORPHA586,SNOMED CT:190905008;MedGen:CN236562 Cystic fibrosis;ivacaftor response - Efficacy germline;unknown 7 117664770 TTGTGGATGGGGGCTGTGTCCTAAGCCATGGCCACAAGCAGTTGATGTGCTTGGCTAGATC 28936688 23293 NM_000020.2(ACVRL1):c.1031G>A (p.Cys344Tyr) ACVRL1 Jun 20, 2017 MedGen:C1838163,OMIM:600376;MedGen:C1832529;MedGen:CN169374 Hereditary hemorrhagic telangiectasia type 2;Pulmonary arterial hypertension related to hereditary hemorrhagic telangiectasia;not specified germline 12 51915483 GCAATGTGCTGGTCAAGAGCAACCTGCAGTGTTGCATCGCCGACCTGGGTGAGCCGGGCGG -1 441316 NM_000368.4(TSC1):c.1264-1G>A TSC1 Feb 28, 2017 MedGen:CN517202 not provided germline 9 132907371 CTTGTGATATAAATGATACTTATCTTTTCAGGAAGAGAGAATGGATTCTGCAAGACCATGT 11146842 26351 NM_000033.3(ABCD1):c.1850G>A (p.Arg617His) ABCD1 Apr 23, 2015 MedGen:C0162309,OMIM:300100,Orphanet:ORPHA43,SNOMED CT:65389002 Adrenoleukodystrophy germline X 153743056 GTGGCGAGAAGCAGAGAATCGGCATGGCCCGCATGTTCTACCACAGGTGAGCACTCCGGGC 121908260 28430 NM_000207.2(INS):c.137G>A (p.Arg46Gln) INS Apr 01, 2008 MedGen:C3150617,OMIM:613370 Maturity-onset diabetes of the young, type 10 germline 11 2160835 TGGAAGCTCTCTACCTAGTGTGCGGGGAACGAGGCTTCTTCTACACACCCAAGACCCGCCG 28935470 26795 NM_001110556.1(FLNA):c.760G>A (p.Glu254Lys) FLNA Feb 11, 2015 MedGen:C0265251,OMIM:311300,Orphanet:ORPHA90650,SNOMED CT:54036001;MedGen:C1844696,OMIM:304120,Orphanet:ORPHA90652,SNOMED CT:42432003;MedGen:C1848213,OMIM:300049,OMIM:300537,SNOMED CT:448227009 Oto-palato-digital syndrome, type I;Oto-palato-digital syndrome, type II;Periventricular nodular heterotopia 1 germline X 154367505 CCCGAGGAGATTGTGGACCCCAACGTGGACGAGCACTCTGTCATGACCTACCTGTCCCAGT 121909053 22128 NM_001122752.1(SERPINI1):c.1175G>A (p.Gly392Glu) SERPINI1 May 25, 2016 MedGen:C1858680,OMIM:604218,Orphanet:ORPHA85110 Encephalopathy, familial, with neuroserpin inclusion bodies de novo;germline 3 167825265 GAACCAATACAGGTACAATTCTATTCATGGGACGAGTCATGCATCCTGAAACAATGAACAC 886037942 432363 NM_004171.3(SLC1A2):c.244G>A (p.Gly82Arg) SLC1A2 Sep 18, 2017 MedGen:C4310717,OMIM:617105 Epileptic encephalopathy, early infantile, 41 germline 11 35315089 CCTGATGTGGTTATGTTAATAGCCTTCCCAGGGGATATACTCATGAGGATGCTAAAAATGC 58760581 426805 NM_001171.5(ABCC6):c.4208+9G>A ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16154619 CTGACCGAGGCGAGGACCTGAGGTATGGTCGTCCCACCATGGCTGGGACCTGCAGGTGGGA 104894664 28476 NM_000371.3(TTR):c.133G>A (p.Ala45Thr) TTR May 01, 1992 MedGen:C2751492,OMIM:105210,SNOMED CT:43532007,SNOMED CT:442012008 Amyloidogenic transthyretin amyloidosis germline 18 31592959 AAAGTTCTAGATGCTGTCCGAGGCAGTCCTGCCATCAATGTGGCCGTGCATGTGTTCAGAA 796052019 200253 NM_000282.3(PCCA):c.425G>A (p.Gly142Asp) PCCA Jul 29, 2016 Human Phenotype Ontology:HP:0003353,MedGen:C0268579,OMIM:606054,Orphanet:ORPHA35;MedGen:CN517202 Propionic acidemia;not provided germline 13 100157297 TTTTTGCTTTCATTTCTAAGGTACATCCAGGTTATGGATTCCTTTCAGAAAACAAAGAATT 144292455 76986 NM_001059.2(TACR3):c.824G>A (p.Trp275Ter) TACR3 Jun 14, 2016 MedGen:C3553844,OMIM:614840;MedGen:CN239347 Hypogonadotropic hypogonadism 11 with or without anosmia;Isolated GnRH Deficiency germline 4 103656258 TTACATACACCATTGTTGGAATTACTCTCTGGGGAGGAGAAATCCCAGGAGATACCTGTGA 1035139364 20085 NM_015665.5(AAAS):c.1087+1G>A AAAS Nov 01, 2001 MedGen:C0271742,OMIM:231550,Orphanet:ORPHA869,SNOMED CT:45414006 Glucocorticoid deficiency with achalasia germline 12 53308724 TTTACTCCCTGTCTTTTCCAGAACGTTGTGGTGAGTTAGGGCAACACTTCAGTATTTGGGG 886043399 270695 NM_000152.4(GAA):c.1754+1G>A GAA Mar 03, 2016 MedGen:C0017921,OMIM:232300,Orphanet:ORPHA365,SNOMED CT:124462004,SNOMED CT:237967002 Glycogen storage disease, type II germline 17 80112101 CGGCCTGACCGAAGCCATCGCCTCCCACAGGTGAGGGCCACGTCCCGCCCCACTGGGCTCT 104886147 35802 NM_000495.4(COL4A5):c.1912G>A (p.Gly638Ser) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108598834 CCAGGCCCAGTAGGTGAAAAAGGCATACAAGGTGTGGCAGGAAATCCAGGCCAGCCAGGAA 397514535 48170 NM_001168272.1(ITPR1):c.4639G>A (p.Val1547Met) ITPR1 Sep 17, 2012 MedGen:C1861732,OMIM:117360,Orphanet:ORPHA208513 Spinocerebellar ataxia 29 germline 3 4706193 GCAGCCAAGAGCCGGGCCATTGCCATTCCCGTGGACCTGGACAGCCAAGTCAACAACCTCT 111033547 32512 NM_000493.3(COL10A1):c.1953G>A (p.Trp651Ter) COL10A1 Jan 01, 1995 MedGen:C0265289,OMIM:156500,Orphanet:ORPHA174,SNOMED CT:29248006 Metaphyseal chondrodysplasia, Schmid type germline 6 116120163 CATCGATCTCACAGAAAATGACCAGGTGTGGCTCCAGCTTCCCAATGCCGAGTCAAATGGC 28941770 18935 NM_000520.5(HEXA):c.533G>A (p.Arg178His) HEXA Nov 08, 2017 na;MedGen:C0039373,OMIM:272800,Orphanet:ORPHA845,SNOMED CT:111385000;MedGen:C1848916;MedGen:CN517202 Hexa, dn allele;Tay-Sachs disease;Tay-Sachs disease, B1 variant;not provided germline;paternal;unknown 15 72353105 CTCACCGGGGCTTGCTGTTGGATACATCTCGCCATTACCTGCCACTCTCTAGCATCCTGGA 386833596 15210 NM_000274.3(OAT):c.1172G>A (p.Trp391Ter) OAT Jun 01, 1992 Human Phenotype Ontology:HP:0012026,MedGen:C0599035,OMIM:258870,SNOMED CT:276426004 Ornithine aminotransferase deficiency germline 10 124398090 TTTACTATTTTTCTTTAGATTGGGATGCTTGGAAGGTGTGTCTACGACTTCGAGATAATGG 587783796 169966 NM_000252.2(MTM1):c.145G>A (p.Val49Ile) MTM1 Feb 08, 2013 MedGen:C0410203,OMIM:310400,Orphanet:ORPHA596,SNOMED CT:46804001 Severe X-linked myotubular myopathy germline X 150598600 GGTACTTTTTTTATCTTAATAGACAAAGAAGTTATTTACATATGTCCTTTCAATGGCCCCA 387906613 38619 NM_005266.6(GJA5):c.253G>A (p.Val85Ile) GJA5 Oct 01, 2010 MedGen:C3279693,OMIM:614049 Atrial fibrillation, familial, 11 germline 1 147758986 ATTCGCTACTGGGTGCTGCAGATCATCTTCGTCTCCACGCCCTCTCTGGTGTACATGGGCC 118204113 16511 NM_000190.3(HMBS):c.754G>A (p.Ala252Thr) HMBS Dec 01, 1993 MedGen:C0162565,OMIM:176000,Orphanet:ORPHA79276,SNOMED CT:234422006 Acute intermittent porphyria germline 11 119092506 GAGACTCTGCTTCGCTGCATCGCTGAAAGGGCCTTCCTGAGGCACCTGGTAGGGCCTGTGC 267607950 96065 NM_000251.2(MSH2):c.1276+1G>A MSH2 Aug 10, 2017 MedGen:C0027672,SNOMED CT:699346009;MedGen:C0009405,Orphanet:ORPHA443090;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Hereditary cancer-predisposing syndrome;Hereditary nonpolyposis colon cancer;Lynch syndrome germline 2 47429942 ATGTTATACAGGCTCTGGAAAAACATGAAGGTAACAAGTGATTTTGTTTTTTTGTTTTCCT 137852589 485849 NM_000044.4(AR):c.2343G>A (p.Met781Ile) AR Mar 23, 2009 MedGen:C0039585,OMIM:300068,SNOMED CT:12313004 Androgen resistance syndrome germline X 67721857 TCCCAGGTACCGCATGCACAAGTCCCGGATGTACAGCCAGTGTGTCCGAATGAGGCACCTC 111033718 36537 NM_001258332.1(GALT):c.197G>A (p.Gly66Asp) GALT Feb 06, 2017 MedGen:C0268151,OMIM:230400,Orphanet:ORPHA79239,SNOMED CT:124354006;MedGen:CN169374 Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase;not specified germline 9 34648131 TCCCTATCTGATAGATCTTTGAAAACAAAGGTGCCATGATGGGCTGTTCTAACCCCCACCC -1 429148 NM_004523.3(KIF11):c.2548-1G>A KIF11 Mar 02, 2017 MedGen:C1835265,OMIM:152950,Orphanet:ORPHA2526 Microcephaly with or without chorioretinopathy, lymphedema, or mental retardation germline 10 92648211 AGTAATAAATATTTATTTGCATCATTTACAGGTTGTAAGCCAATGTTGTGAGGCTTCAAGT 72658176 32306 NM_000089.3(COL1A2):c.2251G>A (p.Gly751Ser) COL1A2 Dec 21, 2017 MedGen:C0268362,OMIM:259420,Orphanet:ORPHA216812,SNOMED CT:385483009 Osteogenesis imperfecta type III germline 7 94420604 AGAGGAGCCAAAGGGCCTAAGGGTGAAAACGGTGTTGTTGGTCCCACAGGCCCCGTTGGAG 79228041 33246 NM_000477.6(ALB):c.1780G>A (p.Glu594Lys) ALB Jun 06, 2012 na ALBUMIN B germline 4 73419634 AAGGCTGACGATAAGGAGACCTGCTTTGCCGAGGAGGTACTACAGTTCTCTTCATTTTAAT 121907896 18555 NM_144585.3(SLC22A12):c.269G>A (p.Arg90His) SLC22A12 Jun 14, 2016 MedGen:C0473219,OMIM:220150,SNOMED CT:236478009 Familial renal hypouricemia germline 11 64591825 GCCCCAACCAGAGGCCCCACCAGTGCCGCCGCTTCCGCCAGCCACAGTGGCAGCTCTTGGA 730880290 178428 NM_016373.3(WWOX):c.1005G>A (p.Trp335Ter) WWOX Jan 01, 2015 MedGen:C4015519,OMIM:616211 Epileptic encephalopathy, early infantile, 28 germline 16 78432701 TATGATGTACTCCAACATTCATCGCAGCTGGTGGGTGTACACACTGCTGTTTACCTTGGCG 727503725 172768 NM_206933.2(USH2A):c.6398G>A (p.Trp2133Ter) USH2A Apr 08, 2010 MedGen:C1848634,OMIM:276901 Usher syndrome, type 2A germline 1 216000490 GCACACATGTGGGCTGTACAAACAGTTCCTGGGTCCTACTGTACACAGCACAGCTGCCACC 1064795282 409849 NM_016239.3(MYO15A):c.4032+1G>A MYO15A Mar 06, 2017 MedGen:CN517202 not provided germline 17 18127166 ATGAACCAGAAACGGGAGGTCATGCAGCAGGTGAGTCTACCTGTCTCCCCAGGACCCTAGG 201869739 100267 NM_003494.3(DYSF):c.937+1G>A DYSF Dec 11, 2015 MedGen:C1850889,OMIM:253601,Orphanet:ORPHA268;MedGen:C1850808,OMIM:254130,Orphanet:ORPHA45448 Limb-girdle muscular dystrophy, type 2B;Miyoshi muscular dystrophy 1 germline 2 71520209 TGGACGTGGGCACCATTTACAGAGAGCCCCGTGAGTTCTCACCACTTTGGCCGTATCCTTG 587777262 131951 NM_021978.3(ST14):c.2269+1G>A ST14 Apr 01, 2009 MedGen:C1865595,OMIM:602400 Ichthyosis, congenital, autosomal recessive 11 germline 11 130208685 TCACGGGCTGGGGACACACCCAGTATGGAGGTAAGCTTCGGGCTGACCTAGGGCTCCGCAG 121434638 23952 NM_006757.3(TNNT3):c.188G>A (p.Arg63His) TNNT3 Jul 14, 2017 MedGen:CN233042;MedGen:C1834523,OMIM:601680,Orphanet:ORPHA1147;MedGen:CN517202 Arthyrgryposis, distal, type 2B;Distal arthrogryposis type 2B;not provided de novo;germline 11 1933737 GCCCCTGCCCACAGGACATCCAGAAGAAGCGTCAGAACAAAGACCTAATGGAGCTCCAGGC -1 457084 NM_000089.3(COL1A2):c.2756G>A (p.Gly919Asp) COL1A2 Aug 08, 2017 MedGen:C0268335,OMIM:130000,Orphanet:ORPHA287,SNOMED CT:20766005,SNOMED CT:83470009;MedGen:C0023931,OMIM:166200,SNOMED CT:385482004 Ehlers-Danlos syndrome, classic type;Osteogenesis imperfecta type I germline 7 94425199 CTGGTGCTGTGGGTAGTCCTGGAGTCAACGGTGCTCCTGGTGAAGCTGGTCGTGATGTGAG 886039273 259378 NM_001242896.1(DEPDC5):c.4397G>A (p.Trp1466Ter) DEPDC5 Apr 13, 2016 Gene:50987,MedGen:C1858477,OMIM:604364 Epilepsy, familial focal, with variable foci 1 germline 22 31901763 TCCTTTCAGGCTTTGAACCCGAAACGTACTGGGATCGAATGCACCTCTTCCAGGAAGCCAT 886042481 267027 NM_006950.3(SYN1):c.377G>A (p.Trp126Ter) SYN1 Sep 01, 2015 MedGen:C1845343,OMIM:300491,Orphanet:ORPHA85294 Epilepsy, X-linked, with variable learning disabilities and behavior disorders germline X 47619352 TGCTGGTCATCGACGAGCCGCACACCGACTGGTAAGCCACTGCCGCGGACGTCTCCCGTGG 1057519026 359036 NM_001733.4(C1R):c.890G>A (p.Gly297Asp) C1R Aug 23, 2016 Gene:791254,MedGen:C0268347,OMIM:130080,Orphanet:ORPHA75392,SNOMED CT:50869007 Ehlers-Danlos syndrome, type 8 germline 12 7088865 TCTTCACAGATGAGTCGGGGGACAGCCGGGGCTGGAAGCTGCGCTACACCACCGAGAGTAA 104894803 26753 NM_004429.4(EFNB1):c.110G>A (p.Trp37Ter) EFNB1 Jun 01, 2006 MedGen:C0220767,OMIM:304110 Craniofrontonasal dysplasia germline X 68829886 CGCTGGCCAAGAACCTGGAGCCCGTATCCTGGAGCTCCCTCAACCCCAAGTGAGTAACTTA -1 434927 NM_000944.4(PPP3CA):c.1339G>A (p.Ala447Thr) PPP3CA Jan 22, 2018 MedGen:CN547334,OMIM:617711 EPILEPTIC ENCEPHALOPATHY, INFANTILE OR EARLY CHILDHOOD, 1 germline 4 101032267 CTTTCTGGAGGGAAGCAAACCCTGCAAAGCGGTAAGCAGGCTGATGGGTATGACTGTGTGC 119103230 16949 NM_000411.6(HLCS):c.1741G>A (p.Gly581Ser) HLCS Nov 01, 2001 MedGen:C0268581,OMIM:253270,Orphanet:ORPHA79242 Holocarboxylase synthetase deficiency germline 21 36759781 GATATTTATTACAGTGACCTCATGAAGATCGGCGGAGTTCTGGTTAACTCAACACTCATGG 796051855 16069 NM_020223.3(FAM20C):c.1446-1G>A FAM20C Nov 01, 2007 MedGen:C1850106,OMIM:259775,Orphanet:ORPHA1832 Raine syndrome germline 7 258645 GCCCTTGACAATTCTGCTTTTCTTCTGGAAGGTTTGGGAAGTATTCGCACGACGAGCTCTC 121913586 204407 NM_000530.7(MPZ):c.499G>A (p.Gly167Arg) MPZ Mar 26, 2015 MedGen:C0270912,OMIM:118200,Orphanet:ORPHA101082,SNOMED CT:42986003 Charcot-Marie-Tooth disease, demyelinating, type 1b germline 1 161306414 GTTCTGGGAGCTGTGATCGGGGGTGTCCTCGGGGTGGTGCTGTTGCTGCTGCTGCTTTTCT 119485088 20069 NM_022041.3(GAN):c.1456G>A (p.Glu486Lys) GAN Nov 01, 2000 MedGen:C1850386,OMIM:256850,Orphanet:ORPHA643,SNOMED CT:128207002 Giant axonal neuropathy germline 16 81365432 GTCCGAAGTCGTGAGGACGCCCAGGGTAGCGAGATGGTAACTTGCAAGTCCGAGTTCTACC 104894332 32875 NM_000486.5(AQP2):c.772G>A (p.Glu258Lys) AQP2 Jul 01, 1998 MedGen:C4015885 Diabetes insipidus, nephrogenic, autosomal dominant germline 12 49955564 GAGCGCGAGGTGCGACGGCGGCAGTCGGTGGAGCTGCACTCGCCGCAGAGCCTGCCACGGG 773048903 200772 NM_000709.3(BCKDHA):c.476G>A (p.Arg159Gln) BCKDHA Jan 01, 2012 MedGen:C0024776,OMIM:248600,SNOMED CT:27718001 Maple syrup urine disease paternal 19 41414149 ACAACACGGACCTGGTGTTTGGCCAGTACCGGGAGGCAGGTACGTCTGTCCGTGGTTTGGC 113994171 33871 NM_000018.3(ACADVL):c.1679-6G>A ACADVL Jun 26, 2017 MedGen:C3887523,OMIM:201475,Orphanet:ORPHA26793,SNOMED CT:237996001,SNOMED CT:237997005;MedGen:CN517202 Very long chain acyl-CoA dehydrogenase deficiency;not provided germline;unknown 17 7224636 GCCCCCACCCCCACCCCCACCCCACCTACCGGACAGATGAACAGTTTCTGCTGCAGCGGCT -1 488171 NM_004183.3(BEST1):c.910G>A (p.Asp304Asn) BEST1 Jan 21, 2015 MedGen:C0339510,OMIM:153700,Orphanet:ORPHA1243,SNOMED CT:90036004 Vitelliform macular dystrophy type 2 germline 11 61959540 CTCATCAACCCCTTTGGAGAGGATGATGATGATTTTGAGACCAACTGGATTGTCGACAGGA 886043752 272127 NM_000070.2(CAPN3):c.1801-1G>A CAPN3 May 12, 2016 MedGen:C1869123,OMIM:253600,Orphanet:ORPHA267 Limb-girdle muscular dystrophy, type 2A germline 15 42408210 TTCCTTCCTGCCTCCTCCCTCCTCTCTCCAGCCCATCATCTTCGTTTCGGACAGAGCAAAC -1 444935 NM_000545.6(HNF1A):c.527-1G>A HNF1A Nov 02, 2017 MedGen:CN517202 not provided germline 12 120993519 GTACCCCACTCACGGCTTTCTGTGCCTGCAGAGTTCACCCATGCAGGGCAGGGAGGGCTGA 773204795 359192 NM_001010874.4(TECRL):c.587G>A (p.Arg196Gln) TECRL Dec 08, 2016 Gene:100653371,MedGen:C3151463,OMIM:614021 Ventricular tachycardia, catecholaminergic polymorphic, 3 germline 4 64309896 CTTGCTTCTGTCATTGTATACACTACATCCGATACCTTTTGGAAACCTTATTTGTTCACAA 104894119 27835 NM_004959.4(NR5A1):c.275G>A (p.Arg92Gln) NR5A1 May 24, 2017 MedGen:CN244002,OMIM:617480;MedGen:C2751824,OMIM:612965,Orphanet:ORPHA98085;MedGen:CN244003 46,XX sex reversal 4;46,XY sex reversal, type 3;ADRENAL INSUFFICIENCY, NR5A1-RELATED not provided 9 124500685 CCGTGCGCGCTGACCGTATGAGGGGTGGCCGGAACAAGTTTGGGCCGATGTACAAGCGGGA 137852327 25425 NM_000402.4(G6PD):c.961G>A (p.Val321Met) G6PD Jun 15, 2017 MedGen:C2720289,OMIM:300908,Orphanet:ORPHA466026;na;na;MedGen:C0017758,Orphanet:ORPHA362 Anemia, nonspherocytic hemolytic, due to G6PD deficiency;G6PD JAMMU;G6PD VIANGCHAN;Glucose 6 phosphate dehydrogenase deficiency germline;unknown X 154533122 TTCTCTCCCTTGGCTTTCTCTCAGGTCAAGGTGTTGAAATGCATCTCAGAGGTGCAGGCCA 104894842 25780 NM_000169.2(GLA):c.1020G>A (p.Trp340Ter) GLA Dec 01, 1993 Human Phenotype Ontology:HP:0001071,MedGen:C0002986,OMIM:301500,Orphanet:ORPHA324,SNOMED CT:16652001 Fabry disease germline X 101398079 GGTTTTTCAGGGAGACAACTTTGAAGTGTGGGAACGACCTCTCTCAGGCTTAGCCTGGGCT 875989883 227925 NM_000444.5(PHEX):c.1735G>A (p.Gly579Arg) PHEX Apr 01, 2017 MeSH:D053098;MedGen:C0733682,OMIM:307800,Orphanet:ORPHA89936,SNOMED CT:82236004;MedGen:CN517202 Familial Hypophosphatemic Rickets;Familial X-linked hypophosphatemic vitamin D refractory rickets;not provided de novo;germline X 22219070 CTGAGTTATGGTGCTATAGGAGTAATTGTCGGACATGAATTTACACATGGATTTGATAATA 727502823 172197 NM_006796.2(AFG3L2):c.1875G>A (p.Met625Ile) AFG3L2 Jan 01, 2015 MedGen:C3280977,OMIM:614487,Orphanet:ORPHA313772 Spastic ataxia 5, autosomal recessive germline 18 12340306 CTATACCAAAGAGCAGCTCTTGGATAGGATGTGTATGACTTTAGGTGGTCGAGTCTCTGAA 397514434 47160 NM_000060.4(BTD):c.1158G>A (p.Trp386Ter) BTD Jun 14, 2016 MedGen:C0220754,OMIM:253260,Orphanet:ORPHA79241,SNOMED CT:8808004 Biotinidase deficiency unknown 3 15645014 GGAAGTCCACTGTGATGAGGCCACCAAGTGGAACGTGAATGCTCCTCCCACATTTCACTCT 28936686 23324 NM_033337.2(CAV3):c.277G>A (p.Ala93Thr) CAV3 Jul 10, 2017 MeSH:D008133,MedGen:C0023976,SNOMED CT:9651007;MedGen:C4016724;MedGen:CN517202 Long QT syndrome;Rippling muscle disease 2, autosomal recessive;not provided germline 3 8745688 CCACTGGCCCTGCTCTGGGGCTTCCTGTTCGCCTGCATCTCCTTCTGCCACATCTGGGCGG 886039344 260338 NM_001399.4(EDA):c.706+1G>A EDA Jun 05, 2017 MedGen:C0162359,OMIM:305100,SNOMED CT:239007005;MedGen:CN517202 Hypohidrotic X-linked ectodermal dysplasia;not provided germline X 70028037 AAGGACCCCCTGGCCTCCAGGGACCTTCTGGTGAGTTCCCCTGTCTCTCCACCCCACCAGG 34937870 205166 NM_000392.4(ABCC2):c.3741+1G>A ABCC2 Dec 22, 2014 MedGen:C0022350,OMIM:237500,Orphanet:ORPHA234,SNOMED CT:44553005 Dubin-Johnson syndrome germline 10 99842094 GTTGGCTTTGTTCTGTCCAATGCACTCAATGTGAGTTTGAAGGTTGGGAGTTTGGTTTCGT 119103284 17228 NM_207352.3(CYP4V2):c.1523G>A (p.Arg508His) CYP4V2 Apr 12, 2012 MedGen:C1859486,OMIM:210370,Orphanet:ORPHA41751 Bietti crystalline corneoretinal dystrophy germline 4 186210586 AGCTTGGTCTAGAAGGACAGTTGATTCTTCGTCCAAGTAATGGCATCTGGATCAAGTTGAA 794728486 197242 NM_000238.3(KCNH2):c.1943G>A (p.Gly648Asp) KCNH2 Sep 09, 2011 MedGen:CN517202 not provided germline 7 150951450 AGATCTTCTCCATCTGCGTCATGCTCATTGGCTGTGAGTGTGCCCAGGGGCGGGCGGCGGG 778653296 259654 NM_005529.6(HSPG2):c.7006+1G>A HSPG2 Apr 28, 2017 MedGen:CN517202 not provided germline 1 21851790 CTGGGACCCAGGGGGCCAACTTAGCCTACCGTGAGTGGGGCCACCAGGCTGGGCTGGGATG 756217590 264183 NM_000094.3(COL7A1):c.4448G>A (p.Gly1483Asp) COL7A1 Jun 06, 2016 MedGen:CN517202 not provided germline 3 48583161 CTCTCACCCTCTCTCTTCAGGGTGACCGGGGCTTTCCAGGGCCCCTGGGTGAGGCTGGAGA 886037776 223668 NM_024757.4(EHMT1):c.3413G>A (p.Trp1138Ter) EHMT1 Jan 20, 2016 MedGen:C1510586,Orphanet:ORPHA106;MedGen:C0795833,OMIM:610253,Orphanet:ORPHA261494 Autism spectrum disorders;Chromosome 9q deletion syndrome de novo 9 137817477 TGCAGCTCTACCGGACGCGGGACATGGGCTGGGGCGTGCGGTCCCTGCAGGACATCCCACC 765411990 419517 NM_000179.2(MSH6):c.2910G>A (p.Trp970Ter) MSH6 Mar 28, 2016 MedGen:C0027672,SNOMED CT:699346009;MedGen:C1333990,Orphanet:ORPHA144,SNOMED CT:315058005 Hereditary cancer-predisposing syndrome;Lynch syndrome germline 2 47800893 CAGAATTGGCTGTAGGACCATAGTCTATTGGGGGATTGGTAGGAACCGTTACCAGCTGGAA 1135401732 263010 NM_031844.2(HNRNPU):c.1089G>A (p.Trp363Ter) HNRNPU Oct 26, 2016 Human Phenotype Ontology:HP:0200134,MedGen:C0543888 Epileptic encephalopathy de novo 1 244859303 TATTGACATACATGAAGTTCGTATTGGCTGGTCACTAACTACAAGTGGAATGTTACTTGGT 111033791 36626 NM_000155.3(GALT):c.948G>A (p.Trp316Ter) GALT Dec 04, 2012 MedGen:C0268151,OMIM:230400,Orphanet:ORPHA79239,SNOMED CT:124354006 Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase not provided 9 34649453 ATCAGAGGCTGGGGCCAACTGGAACCATTGGCAGCTGCACGCTCATTACTACCCTCCGCTC 28939709 21330 NM_002335.3(LRP5):c.4099G>A (p.Glu1367Lys) LRP5 Nov 01, 2004 MedGen:C4016839 Exudative vitreoretinopathy 4, autosomal recessive germline 11 68436987 TCCTTCCCCGACTGTATCGACGGCTCCGACGAGCTCATGTGTGGTGAGCCAGCTTCTGGCA 121908615 21100 NM_001136472.1(LITAF):c.430G>A (p.Val144Met) LITAF Oct 01, 2009 MedGen:C0270913,OMIM:601098,Orphanet:ORPHA101083,SNOMED CT:4183003 Charcot-Marie-Tooth disease, type 1C germline 16 11549693 ATCCCCTTCTGCGTGGATGCCCTGCAGGACGTGGACCATTACTGTCCCAACTGCAGAGCTC 745688122 214308 NM_015631.5(TCTN3):c.3G>A (p.Met1Ile) TCTN3 Feb 23, 2015 MedGen:C3553758,OMIM:614815 Joubert syndrome 18 unknown 10 95693897 CGTCGGACCCGGAGGCCCTGAATGCCCCATGCGCACCCCACAGCTCGCGCTCCTGCAAGTG 886041117 263880 NM_030813.5(CLPB):c.805G>A (p.Ala269Thr) CLPB Sep 14, 2016 MedGen:C4225393,OMIM:616271,Orphanet:ORPHA445038 3-methylglutaconic aciduria with cataracts, neurologic involvement, and neutropenia germline 11 72358940 AACAACCGCGCCAGTTTCAAGGGCTGCACGGCCTTGCACTATGCTGTTCTTGCTGATGACT 864621973 204429 NM_001844.4(COL2A1):c.3301G>A (p.Gly1101Arg) COL2A1 Apr 01, 2015 Human Phenotype Ontology:HP:0002655,MedGen:C0038015,OMIM:183900,Orphanet:ORPHA253 Spondyloepiphyseal dysplasia congenita germline 12 47977128 CAGGGTGCACAAGGCCCCATGGGACCCTCAGGACCAGCTGGAGCCCGGGGAATCCAGGTGA 57802288 21876 NM_002282.3(KRT83):c.1219G>A (p.Glu407Lys) KRT83 Mar 18, 2016 MedGen:C0546966,OMIM:158000,Orphanet:ORPHA573,SNOMED CT:69488000;MedGen:CN517202 Beaded hair;not provided germline 12 52315936 GTGATGAACTCCAAGCTAGGCCTGGATATCGAGATCGCCACCTACAGGCGCCTGCTGGAGG 797045707 207647 NM_003829.4(MPDZ):c.755G>A (p.Trp252Ter) MPDZ Aug 22, 2014 MedGen:C3554691,OMIM:615219 Hydrocephalus, nonsyndromic, autosomal recessive 2 germline 9 13221493 TCATATATGAGCTTTGTTTGTAGGTTCACTGGCAACACATGGAAACGATTGAATTGGTGAA 183894680 15551 NM_020475.2(ANK1):c.-153G>A ANK1 Dec 01, 2000 MedGen:CN068423 Spherocytosis, type 1, autosomal recessive germline 8 41797691 CCCTCCGCCCGCCCGTGCCGGGAGCGCCCGGCCCGACAGCAAGCGCCTCTGGGGCCGATAA 80338827 29120 NM_002473.5(MYH9):c.2105G>A (p.Arg702His) MYH9 Apr 05, 2011 MedGen:C0398641,OMIM:153650,SNOMED CT:234485006;MedGen:C0403445,OMIM:153640,SNOMED CT:236422008;MedGen:CN073381,Orphanet:ORPHA182050 Epstein syndrome;Fechtner syndrome;MYH9 related disorders germline 22 36305984 TGCGCTGCAACGGTGTTCTCGAGGGCATCCGTATCTGCCGCCAGGGCTTCCCCAACAGGGT 28935494 245170 NM_000169.2(GLA):c.1081G>A (p.Gly361Arg) GLA Apr 23, 2015 MedGen:CN517202 not provided germline X 101398018 GTAGCTATGATAAACCGGCAGGAGATTGGTGGACCTCGCTCTTATACCATCGCAGTTGCTT 104886264 36023 NM_000495.4(COL4A5):c.3782G>A (p.Gly1261Glu) COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108668496 AAGGCAACCCTGGGCCCCAAGGTCCTCCTGGGAGACCAGGTATGTCCGTGAGTGGTAGGAG 200598755 226425 NM_033419.4(PGAP3):c.558-10G>A PGAP3 May 17, 2017 MedGen:C3810354,OMIM:615716;MedGen:CN517202 Hyperphosphatasia with mental retardation syndrome 4;not provided germline 17 39673660 GGGCCACCTGCCCTCTGAGCAACCCTGGACGGTGGGGCAGGACCGTGGGGCTGCAGCACCC 121909768 21834 NM_001360.2(DHCR7):c.1055G>A (p.Arg352Gln) DHCR7 Sep 19, 2016 MedGen:C0175694,OMIM:270400,Orphanet:ORPHA818,SNOMED CT:43929004;MedGen:CN517202 Smith-Lemli-Opitz syndrome;not provided germline;unknown 11 71435748 TGCTGGGCCTGGTGGGCTACTACATCTTCCGGGTGGCCAACCACCAGAAGGACCTGTTCCG 758069019 271601 NM_003742.2(ABCB11):c.3692G>A (p.Arg1231Gln) ABCB11 May 02, 2016 MedGen:C2608083,OMIM:605479,Orphanet:ORPHA99961;MedGen:C1866138,OMIM:601847 Benign recurrent intrahepatic cholestasis 2;Progressive familial intrahepatic cholestasis 2 germline 2 168924730 GAGGGGAGAAACAACGCATTGCTATTGCTCGGGCCATTGTACGAGATCCTAAAATCTTGCT 1131692300 424530 NM_000280.4(PAX6):c.300G>A (p.Trp100Ter) PAX6 - MedGen:C0344542,OMIM:106210 Aniridia 1 de novo 11 31801618 TAAGCGGGAGTGCCCGTCCATCTTTGCTTGGGAAATCCGAGACAGATTACTGTCCGAGGGG 374299350 39136 NR_023343.1(RNU4ATAC):r.30G>A RNU4ATAC Apr 08, 2011 MedGen:C1859452,OMIM:210710,SNOMED CT:254102008 Osteodysplastic primordial dwarfism, type 1 germline 2 121530909 TAACCATCCTTTTCTTGGGGTTGCGCTACTGTCCAATGAGCGCATAGTGAGGGCAGTACTG 191312027 167786 NM_000053.3(ATP7B):c.2605G>A (p.Gly869Arg) ATP7B Jun 13, 2017 MedGen:C0019202,OMIM:277900,Orphanet:ORPHA905,SNOMED CT:88518009;MedGen:CN517202 Wilson disease;not provided germline;unknown 13 51950132 GGAGAAGCCATGCCAGTCACTAAGAAACCCGGAAGCACTGTAATTGCGGGGTCTATAAATG 104893899 21929 NM_002495.3(NDUFS4):c.44G>A (p.Trp15Ter) NDUFS4 Mar 01, 2001 MedGen:C1838979,OMIM:252010 Mitochondrial complex I deficiency germline 5 53560706 CAATGTCAGTGGTACTGAGGCAGACGTTGTGGCGGAGAAGGGCAGTGGCTGTAGCTGCCCT 886042009 264621 NM_001844.4(COL2A1):c.2618G>A (p.Gly873Glu) COL2A1 Sep 19, 2016 MedGen:CN517202 not provided germline 12 47980561 CTGGTCCTCAGGGCCCCTCTGGAGCACCTGGGCCTCAGGTGGGTAACGCTGCACTCCAAGA 752626288 442602 NM_005518.3(HMGCS2):c.1162G>A (p.Gly388Arg) HMGCS2 Oct 02, 2017 MedGen:CN517202 not provided germline 1 119755452 AATGGGAACATGTACACCTCATCCCTGTACGGGTGCCTGGCCTCGCTTCTGTCCCAGTGAG 863224130 210991 NM_015560.2(OPA1):c.871-1G>A OPA1 May 18, 2012 MedGen:CN517202 not provided germline 3 193637951 TATGAATAAGTGTTCTTTGTTTTGTGGGAAGGTTGTTGTGGTTGGAGATCAGAGTGCTGGA 67077695 103205 NM_000531.5(OTC):c.77+1G>A OTC - MedGen:CN517202 not provided unknown X 38352774 TGGTCACAACTTCATGGTTCGAAATTTTCGGTAAGTGATGGTCAGAGACTTGGGTTTGATT 886042036 264021 NM_006015.4(ARID1A):c.2988+1G>A ARID1A Oct 11, 2016 MedGen:CN517202 not provided germline 1 26766567 GGGACACCCAAGACAGAATCCAAATCCAAGGTAGTGATTTTTGTCTTGACTCCTTTCAACT 128621202 26417 NM_000061.2(BTK):c.1559G>A (p.Arg520Gln) BTK Oct 01, 1994 MedGen:C0221026,OMIM:300755,Orphanet:ORPHA47,SNOMED CT:65880007 X-linked agammaglobulinemia germline X 101356059 AATACCTGGAGTCAAAGCAGTTCCTTCACCGAGACCTGGTGGGACCTTAGAAGGATTGGCC 368497893 264928 NM_003560.3(PLA2G6):c.1077G>A (p.Ser359=) PLA2G6 Oct 13, 2016 MedGen:CN517202 not provided germline 22 38132831 CGGCAACACCCCGCTGCACCTGGCCATGTCGGTGAGCCCAGGACCGCGTGTCCTGCCCTGT 137853078 22487 NM_000455.4(STK11):c.488G>A (p.Gly163Asp) STK11 Apr 12, 2013 MedGen:C0027672,SNOMED CT:699346009;Gene:8093,MedGen:C0153594,OMIM:273300,SNOMED CT:363449006 Hereditary cancer-predisposing syndrome;Malignant tumor of testis germline;somatic 19 1220396 CCCGCAGGTACTTCTGTCAGCTGATTGACGGCCTGGAGTACCTGCATAGCCAGGGCATTGT 111033829 36458 NM_000155.3(GALT):c.98G>A (p.Arg33His) GALT Dec 04, 2012 MedGen:C0268151,OMIM:230400,Orphanet:ORPHA79239,SNOMED CT:124354006 Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase not provided 9 34647104 ACTGTCTGCCCCCAGACCATCAGCATATCCGCTACAACCCGCTGCAGGATGAGTGGGTGCT 111033305 52666 NM_000441.1(SLC26A4):c.1226G>A (p.Arg409His) SLC26A4 Jul 01, 2017 Human Phenotype Ontology:HP:0011387,MedGen:C1863752,OMIM:600791;Human Phenotype Ontology:HP:0011387,MedGen:C1863752,OMIM:600791;MedGen:C0271829,OMIM:274600,Orphanet:ORPHA705,SNOMED CT:70348004;MedGen:C0271829,OMIM:274600,Orphanet:ORPHA705,SNOMED CT:70348004;MedGen:CN517202;MedGen:CN169374 Enlarged vestibular aqueduct;Enlarged vestibular aqueduct;Pendred's syndrome;Pendred's syndrome;not provided;not specified germline;unknown 7 107690200 CTTGTTTTGTGGCCACCACTGCTCTTTCCCGCACGGCCGTCCAGGAGAGCACTGGAGGAAA 1064793480 411442 NM_000044.4(AR):c.2420G>A (p.Cys807Tyr) AR May 07, 2015 MedGen:CN517202 not provided germline X 67721934 GGCTCCAAATCACCCCCCAGGAATTCCTGTGCATGAAAGCACTGCTACTCTTCAGCATTAG 180177122 132185 NM_024675.3(PALB2):c.2718G>A (p.Trp906Ter) PALB2 Oct 18, 2017 MedGen:C0346153,OMIM:114480,Orphanet:ORPHA227535,SNOMED CT:254843006;MedGen:C0027672,SNOMED CT:699346009;MedGen:CN517202 Familial cancer of breast;Hereditary cancer-predisposing syndrome;not provided germline 16 23626266 TCTTTGGAAAGCTCTGGATGCTTGGCAGTGGGAAAAACTTTATACCTGGCACTTCGCAGAG 74315283 33109 NM_000029.3(AGT):c.1124G>A (p.Arg375Gln) AGT Sep 01, 2005 Human Phenotype Ontology:HP:0008660,MedGen:C0266313,OMIM:267430,SNOMED CT:204949001 Renal dysplasia germline 1 230705933 CCCTCAACTGGATGAAGAAACTATCTCCCCGGTAGGAGCCTCCCGGTCTCCCCTGGAATGT -1 426895 NM_001171.5(ABCC6):c.3124G>A (p.Gly1042Ser) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16165805 CCCATCAGCTTCTTTGAGCGGACACCCATTGGTCACCTGCTAAACCGCTTCTCCAAGGAGA 137853119 16442 NM_153609.3(TMPRSS6):c.1324G>A (p.Gly442Arg) TMPRSS6 May 28, 2009 Human Phenotype Ontology:HP:0001935,MedGen:C0085576,OMIM:206200,Orphanet:ORPHA209981,SNOMED CT:234349007 Microcytic anemia germline 22 37075180 ATCAACTTCACCTCCCAGATCTCCCTCACCGGGCCCGGTGTGCGGGTGCACTATGGCTTGT 116840818 33933 NM_000166.5(GJB1):c.187G>A (p.Val63Ile) GJB1 Mar 30, 2016 MedGen:C0393808,OMIM:302800,Orphanet:ORPHA101075,SNOMED CT:230552007;MedGen:CN517202 X-linked hereditary motor and sensory neuropathy;not provided germline X 71223894 TGCAACACACTCCAGCCTGGCTGCAACAGCGTTTGCTATGACCAATTCTTCCCCATCTCCC 28933093 29543 NM_170707.3(LMNA):c.481G>A (p.Glu161Lys) LMNA Sep 01, 2017 MedGen:C1449563,OMIM:115200,Orphanet:ORPHA300751;EFO:EFO_0000407,Human Phenotype Ontology:HP:0001644,MedGen:C0007193,Orphanet:ORPHA217604,SNOMED CT:195021004;MedGen:CN517202 Dilated cardiomyopathy 1A;Primary dilated cardiomyopathy;not provided germline 1 156130741 GCTCTCAGTGAGAAGCGCACGCTGGAGGGCGAGCTGCATGATCTGCGGGGCCAGGTGGCCA 201637900 246481 NM_000527.4(LDLR):c.2042G>A (p.Cys681Tyr) LDLR Mar 30, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11120424 CCCTGAGCAATGGCGGCTGCCAGTATCTGTGCCTCCCTGCCCCGCAGATCAACCCCCACTC 1131691795 422402 NM_033380.2(COL4A5):c.3410G>A (p.Gly1137Asp) COL4A5 May 18, 2017 MedGen:CN517202 not provided germline X 108665543 CAGGCCCTCCTGGACCAAAAGGTATTAGTGGCCCTCCTGGGAACCCCGGCCTTCCAGGAGA 786204004 185756 NM_014362.3(HIBCH):c.950G>A (p.Gly317Glu) HIBCH Dec 04, 2013 MedGen:C0342738,OMIM:250620,Orphanet:ORPHA88639,SNOMED CT:237958002 Beta-hydroxyisobutyryl-CoA deacylase deficiency germline 2 190213017 TAAAGATCACACTAAGGCAACTCATGGAGGGGTCTTCAAAGACCTTGCAAGAAGTACTAAC 137853061 22069 NM_002454.2(MTRR):c.1459G>A (p.Gly487Arg) MTRR Nov 11, 2013 MedGen:C1856057,OMIM:236270,Orphanet:ORPHA2169;MeSH:D030342,MedGen:C0950123 Homocystinuria-Megaloblastic anemia due to defect in cobalamin metabolism, cblE complementation type;Inborn genetic diseases germline 5 7892815 TCTACTGCCACAACAGAGGTTCTGCGGAAGGGAGTATGTACAGGCTGGCTGGCCTTGTTGG 112202622 51488 NM_000138.4(FBN1):c.2855-1G>A FBN1 May 02, 2012 MedGen:C0024796,OMIM:154700,Orphanet:ORPHA558,SNOMED CT:19346006 Marfan syndrome germline 15 48490079 CTATTTAACCTCCCTTGATTCCCTCTGACAGATATCCGCCTGGAAACCTGCTTCCTGAGGT 886039917 260981 NM_001273.3(CHD4):c.3380G>A (p.Arg1127Gln) CHD4 Jan 24, 2017 MedGen:C4310688,OMIM:617159 Sifrim-Hitz-Weiss syndrome germline 12 6588383 CTCAGCAGTTCTGCTTCTTGCTTTCCACTCGAGCTGGGGGCCTTGGAATCAATCTGGCCAC -1 426953 NM_001171.5(ABCC6):c.2248G>A (p.Gly750Ser) ABCC6 - MedGen:C0033847,OMIM:264800,Orphanet:ORPHA758,SNOMED CT:252246005 Pseudoxanthoma elasticum germline 16 16178965 CTCAGGCCACTGTTCCTTTTGTGGCCACAGGGCATGAATCTCTCCGGAGGCCAGAAGCAGC 121913041 224758 NM_001257989.1(TYMP):c.605G>A (p.Arg202Lys) TYMP Jan 14, 2016 MedGen:C0872218,OMIM:603041,Orphanet:ORPHA298 Mitochondrial DNA depletion syndrome 1 (MNGIE type) germline 22 50527629 TTCCTGCGGACGGAATCCTATATGCAGCCAGAGATGTGACAGCCACCGTGGACAGCCTGCC 1131691117 420812 NM_000267.3(NF1):c.5546+1G>A NF1 May 27, 2016 MedGen:C0027672,SNOMED CT:699346009 Hereditary cancer-predisposing syndrome germline 17 31327840 TAATTTAGGCAGTTCTGACCCGAGTTTACGGTAGGTTTTTTAAAATTCTCTTCAGTTTGAT 113871730 107110 NM_000090.3(COL3A1):c.926G>A (p.Gly309Glu) COL3A1 - MedGen:C0268338,OMIM:130050,Orphanet:ORPHA286,SNOMED CT:17025000 Ehlers-Danlos syndrome, type 4 germline 2 188991697 AGGGTCCAAGAGGGGCTCCTGGTGAGCGAGGACGGCCAGGACTTCCTGGGGCTGCAGTGAG 199473623 78829 NM_198056.2(SCN5A):c.4886G>A (p.Arg1629Gln) SCN5A Apr 07, 2017 MedGen:C1142166,Orphanet:ORPHA130,SNOMED CT:418818005;MedGen:CN517202 Brugada syndrome;not provided germline 3 38551486 CGACGCTCTTCCGAGTCATCCGCCTGGCCCGAATAGGCCGCATCCTCAGACTGATCCGAGG 121918487 28302 NM_000141.4(FGFR2):c.1025G>A (p.Cys342Tyr) FGFR2 Jul 25, 2017 Human Phenotype Ontology:HP:0004439,MeSH:D003394,MedGen:C0010273,OMIM:123500,SNOMED CT:28861008;MedGen:CN231480;MedGen:C1863356,OMIM:101600 Crouzon syndrome;FGFR2 related craniosynostosis;Pfeiffer syndrome germline;somatic 10 121517378 TAACTTTTGAGGACGCTGGGGAATATACGTGCTTGGCGGGTAATTCTATTGGGATATCCTT 398122812 38883 NM_001110556.1(FLNA):c.7896G>A (p.Trp2632Ter) FLNA Jan 01, 2010 MedGen:C1848213,OMIM:300049,OMIM:300537,SNOMED CT:448227009 Periventricular nodular heterotopia 1 germline X 154348897 CAAGGGGGAGTACACACTGGTGGTCAAATGGGGGGACGAGCACATCCCAGGCAGCCCCTAC 137852744 23839 NM_001204.6(BMPR2):c.1040G>A (p.Cys347Tyr) BMPR2 Sep 01, 2000 MedGen:C0152171,OMIM:178600,SNOMED CT:26174007 Primary pulmonary hypertension germline 2 202530866 GAAATGTCCTAGTGAAAAATGATGGAACCTGTGTTATTAGTGACTTTGGACTGTCCATGAG 1114167371 417659 NM_000091.4(COL4A3):c.1175G>A (p.Gly392Glu) COL4A3 - MedGen:C1567744,OMIM:203780,Orphanet:ORPHA88919 Alport syndrome, autosomal recessive unknown 2 227263804 TCCAAGGATCATCAAGGCCTGGCCTCAGAGGAGCCCCTGGATGGCCAGGCCTGAAAGGAAG -1 260331 NM_007075.3(WDR45):c.830+1G>A WDR45 Oct 13, 2017 MedGen:C3550973,OMIM:300894,Orphanet:ORPHA329284;MedGen:CN517202 Neurodegeneration with brain iron accumulation 5;not provided de novo;germline X 49075363 CAAGGATACCCGCCTCAACCGCCGCTCCGCGTGAGTACCCCCTCCCCACCCTACCGTGTCC 797045035 205798 NM_000495.4(COL4A5):c.3998-1G>A COL4A5 Nov 30, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive germline X 108680884 TGCCATAAAACTGTATGTACCTTCTGTGCAGGCATGAAAGGACCCAGTGGAGTACCTGGAT 1131692306 424523 NM_000280.4(PAX6):c.467G>A (p.Trp156Ter) PAX6 - MedGen:C0344542,OMIM:106210 Aniridia 1 maternal 11 31800747 TAAGGATGTTGAACGGGCAGACCGGAAGCTGGGGCACCCGCCCTGGTTGGTATCCGGGGAC -1 450839 NM_004369.3(COL6A3):c.6230G>A (p.Gly2077Asp) COL6A3 May 16, 2017 MedGen:CN029274,OMIM:158810 Bethlem myopathy 1 germline 2 237360140 TCTCACAACAGGGTGAGCGTGGTCCGCCTGGTGTGAACGGCACTCAAGGTTTCCAGGGCTG 587776404 36116 NM_000495.4(COL4A5):c.4803+1G>A COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108694922 TCTCTGTGGATTGGTTATTCCTTCATGATGGTATTTTACACTCTTCCTTGCATTTGTCATC 587783527 169924 NM_178151.2(DCX):c.182G>A (p.Gly61Glu) DCX Feb 08, 2013 Human Phenotype Ontology:HP:0002282,MedGen:C0008519 Heterotopia germline X 111410217 AAGCCAAGAAGGTACGTTTCTACCGCAATGGGGACCGCTACTTCAAGGGGATTGTGTACGC 116840793 23329 NM_033337.2(CAV3):c.139G>A (p.Glu47Lys) CAV3 Apr 15, 2012 MedGen:C1832560;MedGen:CN517202 Rippling muscle disease 2;not provided germline 3 8745550 CTGCAGGTGGATTTTGAAGACGTGATCGCAGAGCCTGTGGGCACCTACAGCTTTGACGGCG 886041513 442143 NM_000435.2(NOTCH3):c.1364G>A (p.Cys455Tyr) NOTCH3 Nov 12, 2014 MedGen:CN517202 not provided germline 19 15189003 CGTGCCTCGACCGCATAGGCCAGTTCACCTGTATCTGTATGGCAGGTGGGTGGTGGGCGTG 515726164 132001 NM_021625.4(TRPV4):c.1875G>A (p.Met625Ile) TRPV4 Apr 02, 2014 Human Phenotype Ontology:HP:0002652,MedGen:C0410528,SNOMED CT:105986008 Skeletal dysplasia germline 12 109792379 CCGATTCCTGCTCGTCTACTTGCTCTTCATGATCGGCTACGCTTCAGGTGAGCTCTGGGTG 398122843 28783 NM_000316.2(PTH1R):c.1148G>A (p.Arg383Gln) PTH1R Jul 01, 1998 MedGen:C1859148,OMIM:215045,Orphanet:ORPHA50945 Chondrodysplasia Blomstrand type germline 3 46901797 TCAACTTCATCCTCTTCATCAATATCGTCCGGGTGCTCGCCACCAAGCTGCGGGAGACCAA 398122954 94559 NM_024582.4(FAT4):c.13193G>A (p.Cys4398Tyr) FAT4 Dec 03, 2013 MedGen:C3809875,OMIM:615546 Van Maldergem syndrome 2 germline 4 125490015 CAAAAACAGATCCCTCAGTGAAGATTGGCTGCCGTGGCCCGAACATTTGTGCCAGCAACCC 879254506 362675 NM_000527.4(LDLR):c.383G>A (p.Cys128Tyr) LDLR Mar 30, 2017 MedGen:C0020445,OMIM:143890,SNOMED CT:397915002,SNOMED CT:398036000 Familial hypercholesterolemia germline 19 11105289 ATGGGAAGTGCATCTCTCGGCAGTTCGTCTGTGACTCAGACCGGGACTGCTTGGACGGCTC 145639028 359629 NM_006005.3(WFS1):c.376G>A (p.Ala126Thr) WFS1 Mar 06, 2015 MedGen:CN517202 not provided germline 4 6289047 GACACGGATGAAGAACTCAACAGCTGCACCGCTGTGGACTGGCTGGTCCTCGCCGCGAAGC 121918013 28716 NM_000478.5(ALPL):c.346G>A (p.Ala116Thr) ALPL Sep 26, 2016 MedGen:C0268413,OMIM:146300,Orphanet:ORPHA247676,SNOMED CT:20756002;MedGen:C0220743,OMIM:241510,SNOMED CT:30174008;MedGen:C0020630,Orphanet:ORPHA436;Human Phenotype Ontology:HP:0003239,MedGen:C0268412,OMIM:241500,Orphanet:ORPHA247651,SNOMED CT:55236002;MedGen:C1840322,Orphanet:ORPHA247685;MedGen:CN517202 Adult hypophosphatasia;Childhood hypophosphatasia;Hypophosphatasia;Infantile hypophosphatasia;Odontohypophosphatasia;not provided germline;unknown 1 21563158 CAGGTCCCTGACAGTGCCGGCACCGCCACCGCCTACCTGTGTGGGGTGAAGGCCAATGAGG -1 417089 NM_019098.4(CNGB3):c.1781+1G>A CNGB3 Mar 27, 2017 MedGen:C1849792,OMIM:262300 Achromatopsia 3 germline 8 86604092 GAAAGCTGGGTCGGTGTTTGGAGAAATCAGGTATCTGAAAGATACTTCATAAATATTGAAG 794727337 192737 NM_006920.4(SCN1A):c.4191G>A (p.Trp1397Ter) SCN1A Mar 09, 2015 MedGen:C1858673,OMIM:604403;MedGen:C0751122,OMIM:607208,Orphanet:ORPHA33069,SNOMED CT:230437002 Generalized epilepsy with febrile seizures plus, type 2;Severe myoclonic epilepsy in infancy germline 2 166002532 ACTAATAGAAAGAAATGAGACTGCTCGATGGAAAAATGTGAAAGTAAACTTTGATAATGTA 267607023 21163 NM_001029.4(RPS26):c.97G>A (p.Asp33Asn) RPS26 Feb 12, 2010 MedGen:C2750080,OMIM:613309 Diamond-Blackfan anemia 10 germline 12 56042518 TGCACTAACTGTGCCCGATGCGTGCCCAAGGACAAGGCCATTAAGAAATTCGTCATTCGAA 28928905 29469 NM_000238.3(KCNH2):c.1468G>A (p.Ala490Thr) KCNH2 Jan 23, 2012 MedGen:C1141890,Orphanet:ORPHA768,SNOMED CT:442917000;MedGen:CN070019;MedGen:CN517202 Congenital long QT syndrome;Long QT syndrome, bradycardia-induced;not provided germline 7 150952514 GAGGAGGTGGTCAGCCACCCCGGCCGCATCGCCGTCCACTACTTCAAGGGCTGGTTCCTCA 886041035 106833 NM_006612.5(KIF1C):c.183G>A (p.Ser61=) KIF1C Jan 31, 2014 MedGen:C1969796,OMIM:611302,Orphanet:ORPHA397946 Ataxia, spastic, 2, autosomal recessive germline 17 5000848 CTTTGACTACTCCTACTGGTCACACACTTCGGTGGGTTGTTGGGCTGGGGGAAGAGCAAGG 387906407 24125 NM_001287174.1(ABCC8):c.4310G>A (p.Arg1437Gln) ABCC8 Sep 12, 2016 MedGen:C1257959,OMIM:256450,SNOMED CT:360339005 Persistent hyperinsulinemic hypoglycemia of infancy germline 11 17395610 AGGACCCCGTCCTCTTCAGCGGCACCATCCGGTGAGCCCCACCACCCCTCAGGCCCACCCA 863224195 211876 NM_017827.3(SARS2):c.589+1G>A SARS2 Jan 31, 2014 MedGen:CN517202 not provided germline 19 38921391 GAGTGCTCCACATGGTCGGAGACAAGCCAGGTGGGCCACACCCCAGGCCTGGGAGCTGACA 1057518207 360687 NM_004006.2(DMD):c.2168+1G>A DMD Jul 17, 2017 MedGen:C0013264,OMIM:310200,Orphanet:ORPHA98896,SNOMED CT:76670001;MedGen:CN517202 Duchenne muscular dystrophy;not provided germline X 32545158 GATTACTGTGGATTCTGAAATTAGGAAAAGGTGAGAGCATCTTAAGCTTTTATCTGCAAAT 398123422 99040 NM_000489.4(ATRX):c.189+1G>A ATRX Nov 01, 2012 MedGen:CN517202 not provided germline X 77698573 TCTGATATGATGGAAAACAGCAAGGAAGAGGTAAGGATAATTATTTAGAGATATTTGTTAG 587776934 48407 NM_005027.3(PIK3R2):c.1117G>A (p.Gly373Arg) PIK3R2 May 12, 2017 MeSH:D030342,MedGen:C0950123;MedGen:C1865285,OMIM:602501;MedGen:C1863924,OMIM:603387,Orphanet:ORPHA83473;MedGen:CN517202 Inborn genetic diseases;Megalencephaly cutis marmorata telangiectatica congenita;Megalencephaly-polymicrogyria-polydactyly-hydrocephalus syndrome 1;not provided de novo;germline 19 18162974 CCGACACCCCTCTCCTCCCCCAGGAAAGGCGGGAACAATAAGCTGATCAAGGTCTTCCACC 112811136 49861 NM_006744.3(RBP4):c.111+1G>A RBP4 Jan 01, 2012 MedGen:C3554593,OMIM:615147,Orphanet:ORPHA352718 Retinal dystrophy, iris coloboma, and comedogenic acne syndrome germline 10 93600917 CGAGTCAAGGAGAACTTCGACAAGGCTCGCGTAGGTATCGGCCCAGGGGGCCCAGGCGGCC 121908474 20847 NM_139025.4(ADAMTS13):c.3638G>A (p.Cys1213Tyr) ADAMTS13 Oct 04, 2001 MedGen:C1268935,OMIM:274150,Orphanet:ORPHA93583,SNOMED CT:373420004 Upshaw-Schulman syndrome germline 9 133456138 TTGACATGCGAGGCCCAGGGCAGGCAGACTGTGCAGTGGCCATTGGGCGGCCCCTCGGGGA 28942076 18895 NM_000053.3(ATP7B):c.2827G>A (p.Gly943Ser) ATP7B Feb 16, 2016 MedGen:C0019202,OMIM:277900,Orphanet:ORPHA905,SNOMED CT:88518009 Wilson disease germline 13 51949700 ACTTTGACGTTGGTGGTATGGATTGTAATCGGTTTTATCGATTTTGGTGTTGTTCAGAGAT 199422275 47889 NR_001566.1(TERC):n.178G>A TERC May 10, 2012 Human Phenotype Ontology:HP:0001915,MedGen:C0002874,OMIM:609135,SNOMED CT:306058006 Aplastic anemia not provided 3 169764883 CCACCGTTCATTCTAGAGCAAACAAAAAATGTCAGCTGCTGGCCCGTTCGCCCCTCCCGGG 121913495 30973 NM_000516.5(GNAS):c.602G>A (p.Arg201His) GNAS Sep 26, 2017 Human Phenotype Ontology:HP:0030078,MeSH:C538231,MedGen:C0152013;MedGen:C0278701;Human Phenotype Ontology:HP:0006744,MeSH:D018268,MedGen:C0206686,Orphanet:ORPHA1501;MeSH:D015179,MedGen:CN236642;MedGen:C1857451,OMIM:219080;MedGen:C2239176,OMIM:114550,Orphanet:ORPHA88673,SNOMED CT:187769009,SNOMED CT:25370001;MeSH:C562393,MedGen:C0151779,SNOMED CT:93655004;MedGen:C0242292,OMIM:174800,Orphanet:ORPHA562;MeSH:D009369,MedGen:C0027651,SNOMED CT:108369006;Human Phenotype Ontology:HP:0100013,MeSH:D001943,MedGen:C1458155,Orphanet:ORPHA180250,SNOMED CT:126926005;MedGen:CN495005,OMIM:617686;Human Phenotype Ontology:HP:0006725,MedGen:C0281361;MedGen:C0206724;MeSH:C535575,MedGen:C1168401,OMIM:275355,Orphanet:ORPHA67037;MeSH:D002583,MedGen:CN236667 Adenocarcinoma of lung;Adenocarcinoma of stomach;Adrenocortical carcinoma;Colorectal Neoplasms;Cushing's syndrome;Hepatocellular carcinoma;Malignant melanoma of skin;McCune-Albright syndrome;Neoplasm;Neoplasm of the breast;PITUITARY ADENOMA 3, MULTIPLE TYPES;Pancreatic adenocarcinoma;Sex cord-stromal tumor;Squamous cell carcinoma of the head and neck;Uterine cervical neoplasms germline;somatic 20 58909366 CAATTTTGTTTCAGGACCTGCTTCGCTGCCGTGTCCTGACTTCTGGAATCTTTGAGACCAA 121965009 15276 NM_000398.6(CYB5R3):c.316G>A (p.Val106Met) CYB5R3 May 01, 2008 MedGen:C2749559 Methemoglobinemia, type I germline 22 42630899 CCCATCTCCAGCGATGATGACAAGGGCTTCGTGGACCTGGTCATCAAGGTGAAGCCTCTGG 267606891 24754 m.10197G>A MT-ND3 Feb 24, 2017 MedGen:C1839040,OMIM:500001;MedGen:C0023264,OMIM:256000,Orphanet:ORPHA506,SNOMED CT:29570005;MedGen:C1838951;MedGen:CN169374 Leber hereditary optic neuropathy with dystonia;Leigh syndrome;Leigh syndrome due to mitochondrial complex I deficiency;not specified germline MT 10197 TACGAGTGCGGCTTCGACCCTATATCCCCCGCCCGCGTCCCTTTCTCCATAAAATTCTTCT 1057516080 354028 NM_172107.3(KCNQ2):c.475G>A (p.Gly159Arg) KCNQ2 Mar 31, 2016 MedGen:C1852587,OMIM:121200 Benign familial neonatal seizures 1 germline 20 63445277 GGCTGCTGCTGCCGGTACCGTGGCTGGAGGGGGCGGCTCAAGTTTGCCCGGAAACCGTTCT 786205007 187409 NM_005249.4(FOXG1):c.689G>A (p.Arg230His) FOXG1 Feb 15, 2013 MedGen:C3150705,OMIM:613454 Rett syndrome, congenital variant de novo 14 28767968 AGAACAAGCAGGGCTGGCAGAACTCCATCCGCCACAATCTGTCCCTCAACAAGTGCTTCGT 121909062 22060 NM_005422.2(TECTA):c.6062G>A (p.Arg2021His) TECTA Aug 01, 2002 MedGen:C1832187,OMIM:601543 Deafness, autosomal dominant 12 germline 11 121187894 TCGAGGAGAATGCAGTCTCCCTGACCTGTCGCTTTCACGTCACCGTCTTTAAATTCATAGG 794727999 196426 NM_005045.3(RELN):c.9526G>A (p.Glu3176Lys) RELN Aug 27, 2015 MedGen:C4225327,OMIM:616436 Epilepsy, familial temporal lobe, 7 germline 7 103490747 AGCATTGGCTGCTCCCCTTTCCAGTTCCATGAAGCCACCATCTACAACTCTGTCAACAGCT 61749403 15330 NM_000552.4(VWF):c.4022G>A (p.Arg1341Gln) VWF May 01, 2010 MedGen:CN517202;MedGen:C1282971,Orphanet:ORPHA166087 not provided;von Willebrand disease, type 2b germline 12 6019396 TCAAGGACCGGAAGCGACCGTCAGAGCTGCGGCGCATTGCCAGCCAGGTGAAGTATGCGGG 121918171 16004 NM_000275.2(OCA2):c.1182G>A (p.Met394Ile) OCA2 Jan 01, 2005 MedGen:C0268495,OMIM:203200,Orphanet:ORPHA79432,SNOMED CT:26336006 Tyrosinase-positive oculocutaneous albinism germline 15 27989601 TTTTGAGACGCTGGCCCTGCTGTTTGGCATGGTAATTACAGCTCTCCCCGTGGGACTGGGC 184841813 187087 NM_000718.3(CACNA1B):c.4166G>A (p.Arg1389His) CACNA1B Mar 27, 2015 MedGen:C3538999,OMIM:614860,Orphanet:ORPHA420492 Dystonia 23 germline 9 138058108 ATGAGGAGCAGGGTCCAAGCCCTGGGTACCGCATGGAGCTGTCCATCTTCTACGTGGTCTA 397514352 36336 NM_000060.4(BTD):c.334G>A (p.Glu112Lys) BTD Dec 04, 2012 MedGen:C0220754,OMIM:253260,Orphanet:ORPHA79241,SNOMED CT:8808004 Biotinidase deficiency not provided 3 15641932 TTTCAGGATGTACAGATTATAGTGTTTCCAGAAGATGGCATTCATGGATTCAACTTTACAA 104886446 35668 NM_000495.4(COL4A5):c.834+1G>A COL4A5 Dec 04, 2012 MedGen:C1567742,OMIM:301050,Orphanet:ORPHA88917 Alport syndrome, X-linked recessive not provided X 108580587 CCTGGACCTCCAGGGATACGTGGTCCTCCAGTAAGTACCTAAAGTGCTTTAGCATCATTTA 80338707 22758 NM_000303.2(PMM2):c.691G>A (p.Val231Met) PMM2 Aug 21, 2017 MedGen:C0349653,OMIM:212065,Orphanet:ORPHA79318,SNOMED CT:277893002 Carbohydrate-deficient glycoprotein syndrome type I germline;unknown 16 8847775 TTCACAGACCCCAGAACCATGGGCTACTCCGTGACAGCGCCTGAGGACACGCGCAGGATCT -1 456876 NM_000238.3(KCNH2):c.461G>A (p.Trp154Ter) KCNH2 Feb 03, 2017 MeSH:D008133,MedGen:C0023976,SNOMED CT:9651007 Long QT syndrome germline 7 150959583 ACACCAACCACCGGGGCCCCCCCACCAGCTGGCTGGCCCCAGGTAAGTGTACTTGCTTTAG 761749884 207858 NM_000352.4(ABCC8):c.331G>A (p.Gly111Arg) ABCC8 Jun 07, 2016 MedGen:C1257959,OMIM:256450,SNOMED CT:360339005 Persistent hyperinsulinemic hypoglycemia of infancy germline;unknown 11 17470182 TCCCACCATCTGCACCTGTACATGCCAGCCGGGATGGCGTTCATGGCTGCTGTCACCTCCG 104893816 27554 NM_003242.5(TGFBR2):c.1379G>A (p.Arg460His) TGFBR2 Jan 09, 2017 MedGen:C2674876,OMIM:610168;MedGen:CN517202 Loeys-Dietz syndrome 2;not provided germline 3 30674229 TGGCTCTGGTGCTCTGGGAAATGACATCTCGCTGTAATGCAGTGGGAGGTAGGTGTGGACC 569729547 437694 NM_001145112.1(PATL2):c.839G>A (p.Arg280Gln) PATL2 Oct 24, 2017 MedGen:CN562785,OMIM:617743 OOCYTE MATURATION DEFECT 4 germline 15 44669814 TAGCTGTGTCGACATGCTTCAGCCCTCGCCGAGCTATTGATGCGGTACCCCATGGAACTCA 397517159 49176 NM_005633.3(SOS1):c.2536G>A (p.Glu846Lys) SOS1 Apr 03, 2017 MeSH:D009634,MedGen:C0028326,Orphanet:ORPHA648,SNOMED CT:205824006;MedGen:CN166718,Orphanet:ORPHA98733;MedGen:CN517202 Noonan syndrome;Rasopathy;not provided de novo;germline 2 39007168 CCCAGATGTATTGTAGAAACTGAAAATTTAGAAGAAAGAGTAGCTGTGGTGAGTCGAATTA 864309698 214002 NM_000496.2(CRYBB2):c.355G>A (p.Gly119Arg) CRYBB2 Jul 10, 2017 MedGen:C1832175,OMIM:601547;Human Phenotype Ontology:HP:0000519,MedGen:C1842324 Cataract 3, multiple types;Congenital cataract de novo;germline 22 25229484 ATCATCCTCTATGAAAACCCCAACTTCACCGGGAAGAAGATGGAAATCATAGATGACGATG 104894815 25462 NM_002049.3(GATA1):c.613G>A (p.Val205Met) GATA1 Apr 17, 2014 MedGen:C4016507;MedGen:C1845837,OMIM:300367,Orphanet:ORPHA67044 Dyserythropoietic anemia with thrombocytopenia;GATA-1-related thrombocytopenia with dyserythropoiesis germline X 48792337 CTCTCCACCCCACCAGAGGCCAGGGAGTGTGTGAACTGCGGAGCAACAGCCACTCCACTGT 80358261 23522 NM_006432.3(NPC2):c.115G>A (p.Val39Met) NPC2 Jul 22, 2008 MedGen:C1843366,OMIM:607625 Niemann-Pick disease type C2 germline 14 74486404 TCTGTGGATGGAGTTATAAAGGAAGTGAATGTGAGCCCATGCCCCACCCAACCCTGCCAGC 876660979 232109 NM_000214.2(JAG1):c.694+1G>A JAG1 Oct 26, 2015 MedGen:CN517202 not provided germline 20 10658467 AAGGCTGGATGGGCCCCGAATGTAACAGAGGTATGTGTGTGTGTGTGCATGTGCACGTGTG 779232987 413199 NM_139284.2(LGI4):c.793G>A (p.Ala265Thr) LGI4 May 02, 2017 MedGen:CN243956,OMIM:617468 Arthrogryposis multiplex congenita, neurogenic, with myelin defect germline 19 35126853 CAGCGCTTCCGGCCCGAGGAAGAGCTGCCCGGTGAGCCCCCTCCCCGTCCTTCTGCCTGTC