{"text_format":"3","workbook":"xlsx","n_sheets":2,"sheets":["TEMPLATE ","EXAMPLE"],"read":"whole","date_system":"1900"}

{"sheet":"TEMPLATE ","index":0,"n_rows":56,"n_cols":14,"rows_kept":56}
["This is a template for the project-sample-metadata file that need to be submitted by email when requesting a Project_ID. Once a Project_ID is assigned  to you, you can submit new data files, or update existing data files under the project you own.  \n"]
["Templates containing example data are found in the EXAMPLE spreadsheet tab below."]
["Only non-targeted LC-MS data file should be uploaded. "]
[]
["CAUTION: "]
["Be aware that Excel may automatically apply formatting to your data. In particular, take care with dates, incrementing autofills and special characters like / or -. Doublecheck that your text file is accurate before uploading"]
[]
["TO REQUEST A Project_ID: "]
["1. Complete this template table."]
["2. A filled project-sample-metadata file is needed when you contact us to request a Project_ID by email. "]
[]
["PROJECT INFO"]
["*Project_ID","Project_ID is assigned to you by email, which is required to submit new data files, or update existing data files under the project you own.  "]
[]
["*Project data release date","Set a date to post data under the project for open access by public."]
[]
["*Project title","A short description of the study"]
[]
["*Project description","A detailed description of the designed study; and how the samples were harvested and experiments  performed. "]
[]
["Related publications","Related publications can be update by submitting the form via email"]
[]
[]
[]
["SUBMITTER INFO"]
["# This section provide the information and contact of submitters."]
["#  * fields are optional. "]
["*First name","Middle name","*Last name","*Organization","Department","*Email(primary)"," Email (secondary)","Phone","Fax","Street","*Country/Region","City","State/Province","Postal code"]
[]
[]
[]
["SAMPLE INFO"]
["# This section lists and describes each of the biological Samples under investgation."]
["# All fields in this section must be completed."]
["# Please keep the uploaded original data file name consistent with the file name in the first column of the table."]
["Sample Name","Organism/Plant species","Organ / Tissue","Planting location","Latitude","Longitude","Planting time","Harvest time","Experiment desciption"]
[]
[]
[]
["SAMPLE PROCESSING INFO"]
["# This section describes the pre-processing method of each sample."]
["# Provide instructions for each step, as well as reagents and instrument parameters (if applicable)."]
["# Include other steps as needed."]
["Processing step1"]
["Processing step2"]
["Processing step3"]
["Processing step4"]
["Processing step5"]
["Processing step6"]
[]
[]
["Sample experiment data file: one raw data file for each sample-experiment-polarity- repeat# combination"]
["# This section contains detailed information on mass spect experiments, including Instrument type, Polarity, and Data acquisition mode fields."]
["# Please keep the uploaded original data file name consistent with the file name in the first column of the table."]
["# Please select from the drop-down box in the form to fill in the Instrument type, Polarity, and Data acquisition mode fields."]
["File name","SAMPLE INFO","Exp-repeat #","Instrument","Instrument type","Polarity","Data acquisition mode","Collision energy","Ionization","Column","Solvent A","Solvent B","Flow rate","Flow gradient"]

{"sheet":"EXAMPLE","index":1,"n_rows":62,"n_cols":14,"rows_kept":62}
["This is a template for the project-sample-metadata file that need to be submitted by email when requesting a Project_ID. Once a Project_ID is assigned  to you, you can submit new data files, or update existing data files under the project you own.  \n"]
["Templates containing example data are found in the EXAMPLE spreadsheet tab below."]
["Only non-targeted LC-MS data file should be uploaded. "]
[]
["CAUTION: "]
["Be aware that Excel may automatically apply formatting to your data. In particular, take care with dates, incrementing autofills and special characters like / or -. Doublecheck that your text file is accurate before uploading"]
[]
["TO REQUEST A Project_ID: "]
["1. Complete this template table."]
["2. A filled project-sample-metadata file is needed when you contact us to request a Project_ID by email. "]
[]
["PROJECT INFO"]
["*Project_ID","Project_ID is assigned to you by email, which is required to submit new data files, or update existing data files under the project you own.  "]
[]
["*Project data release date","Set a date to post data under the project for open access by public."]
[]
["*Project title","A short description of the study"]
[]
["*Project description","A detailed description of the designed study; and how the samples were harvested and experiments  performed. "]
[]
["Related publications","Related publications can be update by submitting the form via email"]
[]
[]
[]
["SUBMITTER INFO"]
["# This section describes the overall of submitter."]
["#  * fields are optional. "]
["*First name","Middle name","*Last name","*Organization","Department","*Email(primary)"," Email (secondary)","Phone","Fax","Street","*Country/Region","City","State/Province","Postal code"]
[]
[]
[]
["SAMPLE INFO"]
["# This section lists and describes each of the biological Samples under investgation."]
["# All fields in this section must be completed."]
["# Please keep the uploaded original data file name consistent with the file name in the first column of the table."]
["Sample Name","Organism/Plant species","Organ / Tissue","Planting location","Latitude","Longitude","Planting time","Harvest time","Experiment desciption"]
["Zhenshan97","rice(Oryza sativa L.)","seed","Yangzhou","119°53'","32°42'",43641,43750,"Seeds were planted in early summer where the water source is control at 3 different levels: dry, low water, or high water.  The plants were subjected to XXXXXXXXXXX/"]
["Zhenshan97","rice(Oryza sativa L.)","seed","Yangzhou","119°53'","32°42'",43641,43750,"Seeds were planted in early summer where the water source is control at 3 different levels: dry, low water, or high water.  The plants were subjected to XXXXXXXXXXX/"]
["Zhenshan97","rice(Oryza sativa L.)","seed","Yangzhou","119°53'","32°42'",43641,43750,"Seeds were planted in early summer where the water source is control at 3 different levels: dry, low water, or high water.  The plants were subjected to XXXXXXXXXXX/"]
[]
[]
["SAMPLE PROCESSING INFO"]
["# This section describes the pre-processing method of each sample."]
["# Provide instructions for each step, as well as reagents and instrument parameters (if applicable)."]
["# Include other steps as needed."]
["Processing step1","The sample is freeze-dried."]
["Processing step2","150 mg of powder of sample was mixed with 1.5 mL 70% aqueous methanol."]
["Processing step3","The mixture was vortexed every 10 min for 3 times and placed in 4°C refrigerator overnight."]
["Processing step4","The mixture was then centrifuged at 12,000g for 10 min in 4°C. "]
["Processing step5","The supernatant of mixture was dried with concentrator under vacuum and re-dissolved with 150 uL 70% aqueous. methanol "]
["Processing step6","The extract was filtered with 0.22μm filter and transferred into sample bottle."]
[]
[]
["Sample experiment data file: one raw data file for each sample-experiment-polarity- repeat# combination"]
["# This section contains detailed information on mass spect experiments, including Instrument type, Polarity, and Data acquisition mode fields."]
["# Please keep the uploaded original data file name consistent with the file name in the first column of the table."]
["# Please select from the drop-down box in the form to fill in the Instrument type, Polarity, and Data acquisition mode fields."]
["File name","SAMPLE INFO","Exp-repeat #","Instrument","Instrument type","Polarity","Data acquisition mode","Collision energy","Ionization","Column","Solvent A","Solvent B","Flow rate","Flow gradient"]
["SampleName-Exp-Pol-Repeat#.raw","Zhenshan97",1,"Q-Exactive Orbitrap Thermo Scientific","UPLC/Q-Exactive","Positive","Full scan","27.50(15eV,40eV)","ESI","ACQUITY UPLC BEH C18 100 x 2.1 mm, 1.7uM","H2O 0.1% FA","ACN 0.1% FA","3.00ul/min","95:5 at 0 min, 5:95 at 20 min, 5:95 at 24 min, 95:5 at 24.1 min, 95:5 at 30 min"]
["SampleName-Exp-Pol-Repeat#.raw","Zhenshan97","2","Q-Exactive Orbitrap Thermo Scientific","UPLC/Q-Exactive","Positive","Full scan","27.50(15eV,40eV)","ESI","ACQUITY UPLC BEH C18 100 x 2.1 mm, 1.7uM","H2O 0.1% FA","ACN 0.1% FA","3.00ul/min","95:5 at 0 min, 5:95 at 20 min, 5:95 at 24 min, 95:5 at 24.1 min, 95:5 at 30 min"]
["SampleName-Exp-Pol-Repeat#.raw","Zhenshan97","1","Q-Exactive Orbitrap Thermo Scientific","UPLC/Q-Exactive","Negative","Full scan","27.50(15eV,40eV)","ESI","ACQUITY UPLC BEH C18 100 x 2.1 mm, 1.7uM","H2O 0.1% FA","ACN 0.1% FA","3.00ul/min","95:5 at 0 min, 5:95 at 20 min, 5:95 at 24 min, 95:5 at 24.1 min, 95:5 at 30 min"]
["SampleName-Exp-Pol-Repeat#.raw","Zhenshan97","2","Q-Exactive Orbitrap Thermo Scientific","UPLC/Q-Exactive","Negative","Full scan","27.50(15eV,40eV)","ESI","ACQUITY UPLC BEH C18 100 x 2.1 mm, 1.7uM","H2O 0.1% FA","ACN 0.1% FA","3.00ul/min","95:5 at 0 min, 5:95 at 20 min, 5:95 at 24 min, 95:5 at 24.1 min, 95:5 at 30 min"]