毒株信息
编号: OEAV1470681 发布时间: 2021-04-27 基因组完整性: -
病毒类型
RNA virus
毒株名称:
hCoV-19/dog/Germany/BY-MVP-000002395/2020
毒株别名:
-
病毒说明:
hCoV-19/dog/Germany/BY-MVP-000002395/2020
物种名称:
Severe acute respiratory syndrome coronavirus 2
物种ID:
属名:
Betacoronavirus
分类谱系:
[Viruses, Riboviria, Orthornavirae, Pisuviricota, Pisoniviricetes, Nidovirales, Cornidovirineae, Coronaviridae, Orthocoronavirinae, Betacoronavirus, Sarbecovirus, Severe acute respiratory syndrome-related coronavirus]
序列长度:
29611
有效碱基数量:
26464
有效碱基百分比:
89.37%
宿主:
Canis lupus familiaris
宿主补充信息:
-
分离来源:
Nasopharyngeal swab
测序技术:
Illumina Hiseq1500
组装方法:
ARTIC V3 amplicons, Nextera XT library, bwa v0.7.17, iVar v1.2.2
覆盖度:
819X
相关链接:
提交者:
Max Muenchhoff; Stefan Krebs; Alexander Graf; Oliver Keppler; Helmut Blum
提交者单位:
Laboratory for Functional Genome Analysis; Dept. Genomics; Gene Center of the LMU Munich
提交者地址:
Feodor-Lynen-Str. 25; 81377 Munich; Germany
样本信息
编号: OESV1470681 采样时间: 2020-11-24
采样地点:
Europe / Germany / Bavaria / Munich
地点补充信息:
-
采样单位:
Max von Pettenkofer Institute, Virology, National Reference Center for Retroviruses, LMU Munich
采样地址:
Pettenkoferstr.9a;80336 Munich; Germany