系统分类
多序列联配
变异
论文
流行病学
病毒筛选
毒株信息
编号:
OEAV1470683
发布时间:
2021-04-06
基因组完整性:
-
病毒类型
RNA virus
毒株名称:
hCoV-19/dog/Spain/UCH-CEU-941000012297834/2021
毒株别名:
-
病毒说明:
hCoV-19/dog/Spain/UCH-CEU-941000012297834/2021
物种名称:
Severe acute respiratory syndrome coronavirus 2
物种ID:
2697049
属名:
Betacoronavirus
分类谱系:
[Viruses, Riboviria, Orthornavirae, Pisuviricota, Pisoniviricetes, Nidovirales, Cornidovirineae, Coronaviridae, Orthocoronavirinae, Betacoronavirus, Sarbecovirus, Severe acute respiratory syndrome-related coronavirus]
序列长度:
399
有效碱基数量:
399
有效碱基百分比:
100.00%
宿主:
Canis lupus familiaris
宿主补充信息:
-
分离来源:
Feces
测序技术:
Sanger
组装方法:
-
覆盖度:
-
相关链接:
EPI_ISL_1490671
提交者:
Miguel Padilla-Blanco
提交者单位:
Pharmacy Department, Facultad de CC Salud, UCH-CEU University
提交者地址:
C/Ramon y Cajal s/n, 46113 Alfara del Patriarca, Spain
样本信息
编号:
OESV1470683
采样时间:
2021-01-25
采样地点:
Europe / Spain / Ceuta
地点补充信息:
Veterinarian hospital
宿主编号:
-
宿主性别:
Male
宿主年龄:
11
采样单位:
Pharmacy Department, Facultad de CC Salud, UCH-CEU University
采样地址:
C/Ramon y Cajal s/n, 46113 Alfara del Patriarca, Spain
NC_045512.2:28144:
GTAACATTAGGGAGGACTTGAAAGAGCCACCACATTTTCACCGAGGCCACGCGGAGTACGATCGAGTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
->
GTAACATTAGGGAGGACTTGAAAGAGCCACCACATTTTCACCGAGGCCACGCGGAGTACGATCGAGTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
×
以下
30
毒株也检测到该变异
virus id
virus name
host
country
Collection Date
OEAV000001
BetaCoV/Anhui/SZ005/2020