毒株信息
编号: OEAV1928490 发布时间: 2021-05-18 基因组完整性: -
病毒类型
RNA virus
毒株名称:
hCoV-19/GuineaBissau/30LNSPGB/2021
毒株别名:
-
病毒说明:
hCoV-19/GuineaBissau/30LNSPGB/2021
物种名称:
Severe acute respiratory syndrome coronavirus 2
物种ID:
属名:
Betacoronavirus
分类谱系:
[Viruses, Riboviria, Orthornavirae, Pisuviricota, Pisoniviricetes, Nidovirales, Cornidovirineae, Coronaviridae, Orthocoronavirinae, Betacoronavirus, Sarbecovirus, Severe acute respiratory syndrome-related coronavirus]
序列长度:
29763
有效碱基数量:
28381
有效碱基百分比:
95.36%
宿主:
Homo sapiens
宿主补充信息:
-
分离来源:
Oropharyngeal swab
测序技术:
Nanopore GridION
组装方法:
artic pipeline
覆盖度:
100x
相关链接:
提交者:
Aladje Balde, Abdul Karim Sesay, Abdoulie Kanteh, Bakary Sanyang, Simão Tchuda Bióté, Rui Inndi, Adul Candé, Faatu Cassama, Milanca Agostinho Cá, Rei José Pereira, Erica Luis Maria Magalhães, Aicha Balde, Bubacar Delgado Pinto Embaló, Edmira Maria da Costa, Paulina Joãozinho da Costa Jarra Manneh, Mariama Kujabi, Dabiri Damilari, Sainabou Laye Ndure
提交者单位:
MRCG at LSHTM, Genomics lab
提交者地址:
MRCG at LSHTM, Genomics lab , P.O BOX 275
样本信息
编号: OESV1928490 采样时间: 2021-01-06
采样地点:
Africa / Guinea-Bissau
地点补充信息:
-
宿主编号:
-
宿主性别:
Male
宿主年龄:
12
采样单位:
Laboratório de Biologia Molecular Jean Piaget
采样地址:
Laboratório Nacional da Saúde Publica