毒株信息
编号： OEAV2129869 发布时间： 2021-05-27 基因组完整性： partial
病毒类型
RNA viruses
毒株名称：
SARS-CoV-2/human/HKG/HKPU-00181/2021 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), and surface glycoprotein (S) genes, complete cds; ORF3a protein (ORF3a) gene, partial cds; and envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes
毒株别名：
-
病毒说明：
Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/HKG/HKPU-00181/2021 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), and surface glycoprotein (S) genes, complete cds; ORF3a protein (ORF3a) gene, partial cds; and envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes, complete cds
物种名称：
Severe acute respiratory syndrome coronavirus 2
物种ID：
2697049
属名：
Betacoronavirus
分类谱系：
[root, Viruses, Riboviria, Nidovirales, Cornidovirineae, Coronaviridae, Orthocoronavirinae, Betacoronavirus, Sarbecovirus, Severe acute respiratory syndrome-related coronavirus, Severe acute respiratory syndrome coronavirus 2]
序列长度：
29764
有效碱基数量：
29056
有效碱基百分比：
97.62%
宿主：
Homo sapiens
宿主补充信息：
-
分离来源：
-
测序技术：
Nanopore
组装方法：
ARTIC-nCoV-bioinformaticsSOP v. v1.1.0
覆盖度：
-
相关链接：
MZ298842
提交者：
Cheng,V.C.-C., Siu,G.K.-H., Wong,S.-C., Chen,H., Lee,L.-K., Leung,J.S.-L., Lu,K.K., Chan,C.T.-M., Lo,H.W.-H., Leung,K.S.-S., Wong,E.Y.-K., Luk,S., Ng,T.T.-L., Jim,H.-C., Lao,H.-Y., Wong,D.S.-H., Tam,K.K.-G., Mok,K.K.-S., Wong,K.N., Yeh,E.Y.-W., Lam,B.P.-H., Lam,J.Y.-W., Wu,A.K.-L., Yau,M.C.-Y., Lai,Y.W.-M., Ho,A.Y.-M., Leung,W.-S., Chan,M.-C., Lam,B.H.-S., To,W.-K., Lee,R.A., Lung,D.C., Tse,H., To,K.K.-W. and Yuen,K.-Y.
提交者单位：
Department of Health Technology and Informatics, The Hong Kong Polytechnic University
提交者地址：
11 Yuk Choi Rd, Hung Hom, Hong Kong 852, Hong Kong
样本信息
编号： OESV2129869 采样时间： 2021-04-30
病毒注释