毒株信息
编号: OEAV392459 发布时间: 2020-12-02 基因组完整性: partial
病毒类型
RNA viruses
毒株名称:
SARS-CoV-2/Panthera tigris/USA/tiger-2-040420/2020 ORF1ab polyprotein, 2'-O-ribose methyltransferase region, (ORF1ab) gene, partial cds; surface glycoprotein (S) gene, complete cds; and ORF3a protein (ORF3a) gene
毒株别名:
-
病毒说明:
Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/Panthera tigris/USA/tiger-2-040420/2020 ORF1ab polyprotein, 2'-O-ribose methyltransferase region, (ORF1ab) gene, partial cds; surface glycoprotein (S) gene, complete cds; and ORF3a protein (ORF3a) gene, partial cds
物种名称:
Severe acute respiratory syndrome coronavirus 2
物种ID:
属名:
Betacoronavirus
分类谱系:
[root, Viruses, Riboviria, Nidovirales, Cornidovirineae, Coronaviridae, Orthocoronavirinae, Betacoronavirus, Sarbecovirus, Severe acute respiratory syndrome-related coronavirus, Severe acute respiratory syndrome coronavirus 2]
序列长度:
4016
有效碱基数量:
4016
有效碱基百分比:
100.00%
宿主:
Panthera tigris
宿主补充信息:
-
分离来源:
feces
测序技术:
MinION
组装方法:
minimap2 v. 2.17
覆盖度:
-
相关链接:
提交者:
Cardia Caserta,L. and Diel,D.G.
提交者单位:
Population Medicine and Diagnostic Sciences, Cornell University
提交者地址:
240 Farrier Rd, Ithaca, NY 14853, USA
样本信息
编号: OESV392459 采样时间: 2020-04-04
病毒注释