The SRAS-CoV-2 genome sequences and metadata used in this service are publicly available from GISAID (http://gisaid.org) and Genbank (https://www.ncbi.nlm.nih.gov/genbank). NC_045512.2 (SARS-CoV-2) was used as the reference sequence, and data were analyzed from 1,155,016 SARS-Cov-2 sequences after quality control as of Aug 06th. The variant annotation method was Annovar (version number: 2019Oct24).
| 变异 |
物种编号 |
染色体 |
位置 |
ref |
alt |
类型 |
区域 |
基因 |
氨基酸变化 |
氨基酸变化位置 |
同义/非同义 |
宿主 |
国家 |
突变频率 |
变异毒株 |
| NC_045512.2:29747:GTACGA->G |
2697049 |
NC_045512.2 |
29747 |
GTACGA |
G |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0.0011‰ |
27
|
| NC_045512.2:29747:GTACGATCGAGTGTACAGTGAACAA->G |
2697049 |
NC_045512.2 |
29747 |
GTACGATCGAGTGTACAGTGAACAA |
G |
indel |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0.0003‰ |
8
|
| NC_045512.2:29747:G->A |
2697049 |
NC_045512.2 |
29747 |
G |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
United States |
0.0083‰ |
191
|
| NC_045512.2:29747:G->C |
2697049 |
NC_045512.2 |
29747 |
G |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
Luxembourg,Russia |
0.0023‰ |
54
|
| NC_045512.2:29747:G->T |
2697049 |
NC_045512.2 |
29747 |
G |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
United States,United Kingdom,Scotland |
0.1288‰ |
2963
|
| NC_045512.2:29747:GTACGATCGAGTGTACAGTGAACAATGC->G |
2697049 |
NC_045512.2 |
29747 |
GTACGATCGAGTGTACAGTGAACAATGC |
G |
indel |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0.0012‰ |
28
|
| NC_045512.2:29746:AGTACGATCGAGTG->A |
2697049 |
NC_045512.2 |
29746 |
AGTACGATCGAGTG |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0‰ |
2
|
| NC_045512.2:29746:AGTACGAT->A |
2697049 |
NC_045512.2 |
29746 |
AGTACGAT |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
Canada |
0‰ |
1
|
| NC_045512.2:29746:AG->A |
2697049 |
NC_045512.2 |
29746 |
AG |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
Brazil |
0‰ |
1
|
| NC_045512.2:29746:AGTACGATCGAG->A |
2697049 |
NC_045512.2 |
29746 |
AGTACGATCGAG |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0‰ |
1
|
| NC_045512.2:29746:AGTACGATCG->A |
2697049 |
NC_045512.2 |
29746 |
AGTACGATCG |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0.0002‰ |
6
|
| NC_045512.2:29746:AGTACGATCGAGTGTACAGT->A |
2697049 |
NC_045512.2 |
29746 |
AGTACGATCGAGTGTACAGT |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0.0006‰ |
16
|
| NC_045512.2:29746:A->T |
2697049 |
NC_045512.2 |
29746 |
A |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
Peru |
0.001‰ |
24
|
| NC_045512.2:29746:AGTACGATC->A |
2697049 |
NC_045512.2 |
29746 |
AGTACGATC |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
Australia |
0.004‰ |
93
|
| NC_045512.2:29746:A->C |
2697049 |
NC_045512.2 |
29746 |
A |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
India |
0.0005‰ |
12
|
| NC_045512.2:29746:A->G |
2697049 |
NC_045512.2 |
29746 |
A |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
Singapore |
0.0009‰ |
22
|
| NC_045512.2:29746:AGTACGATCGAGT->A |
2697049 |
NC_045512.2 |
29746 |
AGTACGATCGAGT |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
Netherlands,United Kingdom,Australia |
0.0339‰ |
781
|
| NC_045512.2:29745:GAGTACGATCGAGT->G |
2697049 |
NC_045512.2 |
29745 |
GAGTACGATCGAGT |
G |
indel |
downstream |
|
|
|
|
Homo sapiens |
Germany |
0‰ |
1
|
| NC_045512.2:29745:GAGTACGATCGAGTGTACAGTGA->G |
2697049 |
NC_045512.2 |
29745 |
GAGTACGATCGAGTGTACAGTGA |
G |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0.0006‰ |
16
|
| NC_045512.2:29745:GAGTACGATCGAGTGTAC->G |
2697049 |
NC_045512.2 |
29745 |
GAGTACGATCGAGTGTAC |
G |
indel |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0.0009‰ |
23
|