The SRAS-CoV-2 genome sequences and metadata used in this service are publicly available from GISAID (http://gisaid.org) and Genbank (https://www.ncbi.nlm.nih.gov/genbank). NC_045512.2 (SARS-CoV-2) was used as the reference sequence, and data were analyzed from 1,155,016 SARS-Cov-2 sequences after quality control as of Aug 06th. The variant annotation method was Annovar (version number: 2019Oct24).
| 变异 |
物种编号 |
染色体 |
位置 |
ref |
alt |
类型 |
区域 |
基因 |
氨基酸变化 |
氨基酸变化位置 |
同义/非同义 |
宿主 |
国家 |
突变频率 |
变异毒株 |
| NC_045512.2:29741:C->G |
2697049 |
NC_045512.2 |
29741 |
C |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
Denmark |
0.0021‰ |
49
|
| NC_045512.2:29741:C->A |
2697049 |
NC_045512.2 |
29741 |
C |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
United States |
0.0006‰ |
16
|
| NC_045512.2:29741:CGCGGAGT->C |
2697049 |
NC_045512.2 |
29741 |
CGCGGAGT |
C |
indel |
downstream |
|
|
|
|
Homo sapiens |
Sweden |
0‰ |
1
|
| NC_045512.2:29741:C->T |
2697049 |
NC_045512.2 |
29741 |
C |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
Turkey,
Singapore,
United States,
United Kingdom,
Thailand,
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|
0.039‰ |
899
|
| NC_045512.2:29740:ACGCGGAGTACGATC->G |
2697049 |
NC_045512.2 |
29740 |
ACGCGGAGTACGATC |
G |
indel |
downstream |
|
|
|
|
Homo sapiens |
Slovenia |
0‰ |
1
|
| NC_045512.2:29740:ACGCGGAGTACGAT->A |
2697049 |
NC_045512.2 |
29740 |
ACGCGGAGTACGAT |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0.0001‰ |
3
|
| NC_045512.2:29740:ACGCGGAGTACGATCGAGTGTACAGTG->A |
2697049 |
NC_045512.2 |
29740 |
ACGCGGAGTACGATCGAGTGTACAGTG |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0.0001‰ |
3
|
| NC_045512.2:29740:AC->A |
2697049 |
NC_045512.2 |
29740 |
AC |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0‰ |
2
|
| NC_045512.2:29740:ACGCGGAGTACGATCGAGTG->A |
2697049 |
NC_045512.2 |
29740 |
ACGCGGAGTACGATCGAGTG |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
Belgium |
0.0014‰ |
33
|
| NC_045512.2:29740:A->C |
2697049 |
NC_045512.2 |
29740 |
A |
C |
snv |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0.0007‰ |
18
|
| NC_045512.2:29740:ACGCGGAGTACGATCGAGTGT->A |
2697049 |
NC_045512.2 |
29740 |
ACGCGGAGTACGATCGAGTGT |
A |
indel |
downstream |
|
|
|
|
Homo sapiens |
Greece |
0‰ |
1
|
| NC_045512.2:29740:A->G |
2697049 |
NC_045512.2 |
29740 |
A |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
Singapore |
0.0041‰ |
96
|
| NC_045512.2:29740:A->T |
2697049 |
NC_045512.2 |
29740 |
A |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
United States |
0.0046‰ |
106
|
| NC_045512.2:29739:CACGCGGAGTACG->C |
2697049 |
NC_045512.2 |
29739 |
CACGCGGAGTACG |
C |
indel |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0‰ |
1
|
| NC_045512.2:29739:CACGCGGAGTACGAT->C |
2697049 |
NC_045512.2 |
29739 |
CACGCGGAGTACGAT |
C |
indel |
downstream |
|
|
|
|
Homo sapiens |
Spain |
0.0001‰ |
3
|
| NC_045512.2:29739:CACGCGGAGTACGATCGAGTGT->C |
2697049 |
NC_045512.2 |
29739 |
CACGCGGAGTACGATCGAGTGT |
C |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0.0001‰ |
3
|
| NC_045512.2:29739:CACGCGGAGT->C |
2697049 |
NC_045512.2 |
29739 |
CACGCGGAGT |
C |
indel |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0.0005‰ |
12
|
| NC_045512.2:29739:C->G |
2697049 |
NC_045512.2 |
29739 |
C |
G |
snv |
downstream |
|
|
|
|
Homo sapiens |
Singapore |
0.0007‰ |
17
|
| NC_045512.2:29739:C->A |
2697049 |
NC_045512.2 |
29739 |
C |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0.0005‰ |
13
|
| NC_045512.2:29739:C->T |
2697049 |
NC_045512.2 |
29739 |
C |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
United States,
United Kingdom,
France,
Australia,
India,
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|
0.0322‰ |
741
|