The SRAS-CoV-2 genome sequences and metadata used in this service are publicly available from GISAID (http://gisaid.org) and Genbank (https://www.ncbi.nlm.nih.gov/genbank). NC_045512.2 (SARS-CoV-2) was used as the reference sequence, and data were analyzed from 1,155,016 SARS-Cov-2 sequences after quality control as of Aug 06th. The variant annotation method was Annovar (version number: 2019Oct24).
变异 |
物种编号 |
染色体 |
位置 |
ref |
alt |
类型 |
区域 |
基因 |
氨基酸变化 |
氨基酸变化位置 |
同义/非同义 |
宿主 |
国家 |
突变频率 |
变异毒株 |
NC_045512.2:29738:CCACGCGGAGTACGATCGAGTGT->C |
2697049 |
NC_045512.2 |
29738 |
CCACGCGGAGTACGATCGAGTGT |
C |
indel |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0.0005‰ |
12
|
NC_045512.2:29738:CCACGCGGAGT->C |
2697049 |
NC_045512.2 |
29738 |
CCACGCGGAGT |
C |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0.0004‰ |
11
|
NC_045512.2:29738:CCA->C |
2697049 |
NC_045512.2 |
29738 |
CCA |
C |
indel |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0.0001‰ |
3
|
NC_045512.2:29738:CCACGCGGAGTACGATCGAGTGTA->C |
2697049 |
NC_045512.2 |
29738 |
CCACGCGGAGTACGATCGAGTGTA |
C |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0.0011‰ |
26
|
NC_045512.2:29738:C->G |
2697049 |
NC_045512.2 |
29738 |
C |
G |
snv |
downstream |
|
|
|
|
Human |
South Africa |
0.0002‰ |
6
|
NC_045512.2:29738:CCACGCGGAGTACGATCGAGTGTACAGTG->C |
2697049 |
NC_045512.2 |
29738 |
CCACGCGGAGTACGATCGAGTGTACAGTG |
C |
indel |
downstream |
|
|
|
|
Homo sapiens |
Australia |
0.0002‰ |
5
|
NC_045512.2:29738:C->A |
2697049 |
NC_045512.2 |
29738 |
C |
A |
snv |
downstream |
|
|
|
|
Homo sapiens |
Greece,Singapore |
0.0156‰ |
360
|
NC_045512.2:29738:C->T |
2697049 |
NC_045512.2 |
29738 |
C |
T |
snv |
downstream |
|
|
|
|
Homo sapiens |
United States,
United Kingdom,
Israel,
Australia,
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|
0.0698‰ |
1606
|
NC_045512.2:29737:GCCACGCGGAGTAC->G |
2697049 |
NC_045512.2 |
29737 |
GCCACGCGGAGTAC |
G |
indel |
downstream |
|
|
|
|
Human |
Brazil |
0‰ |
1
|
NC_045512.2:29737:GC->G |
2697049 |
NC_045512.2 |
29737 |
GC |
G |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0‰ |
2
|
NC_045512.2:29737:GCCACGCGGAGTACGATCGA->G |
2697049 |
NC_045512.2 |
29737 |
GCCACGCGGAGTACGATCGA |
G |
indel |
downstream |
|
|
|
|
Homo sapiens |
Israel |
0.0001‰ |
4
|
NC_045512.2:29737:GCCACGCGGAGTA->G |
2697049 |
NC_045512.2 |
29737 |
GCCACGCGGAGTA |
G |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0.0005‰ |
12
|
NC_045512.2:29737:GCCACGCGGAGTACGA->G |
2697049 |
NC_045512.2 |
29737 |
GCCACGCGGAGTACGA |
G |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0‰ |
2
|
NC_045512.2:29737:GCCA->G |
2697049 |
NC_045512.2 |
29737 |
GCCA |
G |
indel |
downstream |
|
|
|
|
Homo sapiens |
South Korea |
0‰ |
2
|
NC_045512.2:29737:GCCACGC->G |
2697049 |
NC_045512.2 |
29737 |
GCCACGC |
G |
indel |
downstream |
|
|
|
|
Homo sapiens |
South Korea |
0.0016‰ |
38
|
NC_045512.2:29737:GCCACGCGGAGTACGATCGAGTGTAC->G |
2697049 |
NC_045512.2 |
29737 |
GCCACGCGGAGTACGATCGAGTGTAC |
G |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0‰ |
1
|
NC_045512.2:29737:GCC->G |
2697049 |
NC_045512.2 |
29737 |
GCC |
G |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0.0002‰ |
5
|
NC_045512.2:29737:GCCACGCGGAGTACGATCGAGTGTACAGT->G |
2697049 |
NC_045512.2 |
29737 |
GCCACGCGGAGTACGATCGAGTGTACAGT |
G |
indel |
downstream |
|
|
|
|
Homo sapiens |
United Kingdom |
0.0001‰ |
3
|
NC_045512.2:29737:GCCAC->G |
2697049 |
NC_045512.2 |
29737 |
GCCAC |
G |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0‰ |
2
|
NC_045512.2:29737:GCCACGCGGAGTACGATCGAGTGTA->G |
2697049 |
NC_045512.2 |
29737 |
GCCACGCGGAGTACGATCGAGTGTA |
G |
indel |
downstream |
|
|
|
|
Homo sapiens |
United States |
0.0013‰ |
30
|