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病毒基因组
基因组编号 毒株名称 引用编号 病毒类型 物种名称 采样国家 采样时间 宿主 序列长度 发布时间 分离来源 物种ID 种名 属名 科名 数据源 采样单位 采样地址 提交者 提交者单位 覆盖度 有效碱基数量 有效碱基百分比
OEAV468701 hCoV-19/dog/Netherlands/un-EMC-2/2020 EPI_ISL_722380 RNA virus Severe acute respiratory syndrome coronavirus 2 Netherlands 2020-10-29 Canis lupus familiaris 29775 2020-12-21 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Dutch COVID-19 response team Dutch COVID-19 response team Bas Oude Munnink, Reina Sikkema, David Nieuwenhuijse, Irina Chestakova, Anne van der Linden, Marjan Boter, Emmanuelle Munger, Corine GeurtsvanKessel, Annemiek van der Eijk, Richard Molenkamp, Marion Koopmans, on behalf of the Dutch national COVID-19 response team. Erasmus Medical Center 30x 27476 92.28
OEAV413890 SARS-CoV-2/Canis familiaris/USA/TAMU-077/2020 MW263336 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2020-07-28 Canis lupus familiaris 29834 2020-12-11 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Killian,M.L., Franzen,K.M. and Love,E.R. Diagnostic Virology Laboratory, USDA National Veterinary Services Laboratories 29834 100.00
OEAV406430 hCoV-19/canine/USA/TX-TAMU-077/2020 EPI_ISL_699508 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2020-07-28 Canis lupus familiaris 29834 2020-11-17 Respiratory swab 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Diagnostic Virology Laboratory, USDA National Veterinary Services Laboratories 1920 Dayton Avenue, Ames, IA 50010, USA Hamer,S.A., Pauvolid-Correa,A., Zecca,I.B., Davila,E., Auckland,L.D., Roundy,C.M., Tang,W., Torchetti,M., Killian,M.L., Jenkins-Moore,M., Akpalu,Y., Ghai,R.R., Spengler,J., Barton Behravesh,C., Fischer,R.S., Hamer,G.L., Franzen,K.M., Love,E.R. Diagnostic Virology Laboratory, USDA National Veterinary Services Laboratories 29834 100.00
OEAV210202 SARS-CoV-2/canine/HKG/20-02756/2020 ORF1ab polyprotein (ORF1ab) and ORF1a polyprotein (ORF1ab) genes, partial cds; and surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes MT215193 RNA viruses Severe acute respiratory syndrome coronavirus 2 China 2020-02-26 Canis lupus familiaris 27871 2020-05-01 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Sit,T.H.S., Brackman,C.J., Sims,L.D., Tsang,D.N.C., Chu,D.K.W., Perera,R.A.P.M., Poon,L.L.M. and Peiris,M. School of Public Health, The University of Hong Kong 27871 100.00
OEAV213146 Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/canine/HKG/20-03695/2020 MT270814 RNA viruses Severe acute respiratory syndrome coronavirus 2 China 2020-03-18 Canis lupus familiaris 29764 2020-05-01 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Sit,T.H.S., Brackman,C.J., Sims,L.D., Tsang,D.N.C., Chu,D.K.W., Perera,R.A.P.M., Poon,L.L.M. and Peiris,M. School of Public Health, The University of Hong Kong 29764 100.00
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