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病毒基因组
基因组编号 毒株名称 引用编号 病毒类型 物种名称 采样国家 采样时间 宿主 序列长度 发布时间 分离来源 物种ID 种名 属名 科名 数据源 采样单位 采样地址 提交者 提交者单位 覆盖度 有效碱基数量 有效碱基百分比
OEAV624808 SARS-CoV-2/Neovison vison/USA/WI-CDC-CWOF-2204/2020 MW626378 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2020-10-15 Neovison vison 29742 2021-02-18 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Zhang,J., Li,Y., Lynch,B., Tao,Y., Queen,K., Montmayeur,A., Uehara,A., Cook,P., Ng,H.J., Marine,R., Paden,C.R., Wang,H. and Tong,S. Respiratory Viruses Branch, Centers for Disease Control and Prevention 29738 99.99
OEAV624809 SARS-CoV-2/Neovison vison/USA/WI-CDC-CWOZ-2205/2020 MW626379 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2020-10-15 Neovison vison 29797 2021-02-18 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Zhang,J., Li,Y., Lynch,B., Tao,Y., Queen,K., Montmayeur,A., Uehara,A., Cook,P., Ng,H.J., Marine,R., Paden,C.R., Wang,H. and Tong,S. Respiratory Viruses Branch, Centers for Disease Control and Prevention 29793 99.99
OEAV624810 SARS-CoV-2/Neovison vison/USA/WI-CDC-CWPJ-2206/2020 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes MW626380 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2020-10-15 Neovison vison 29797 2021-02-18 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Zhang,J., Li,Y., Lynch,B., Tao,Y., Queen,K., Montmayeur,A., Uehara,A., Cook,P., Ng,H.J., Marine,R., Paden,C.R., Wang,H. and Tong,S. Respiratory Viruses Branch, Centers for Disease Control and Prevention 29141 97.80
OEAV624811 SARS-CoV-2/Neovison vison/USA/WI-CDC-CWQ5-2422/2020 MW626400 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2020-10-15 Neovison vison 29803 2021-02-18 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Zhang,J., Li,Y., Lynch,B., Tao,Y., Queen,K., Montmayeur,A., Uehara,A., Cook,P., Ng,H.J., Marine,R., Paden,C.R., Wang,H. and Tong,S. Respiratory Viruses Branch, Centers for Disease Control and Prevention 29776 99.91
OEAV624812 SARS-CoV-2/Neovison vison/USA/WI-CDC-CWR7-2209/2020 MW626381 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2020-10-15 Neovison vison 29797 2021-02-18 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Zhang,J., Li,Y., Lynch,B., Tao,Y., Queen,K., Montmayeur,A., Uehara,A., Cook,P., Ng,H.J., Marine,R., Paden,C.R., Wang,H. and Tong,S. Respiratory Viruses Branch, Centers for Disease Control and Prevention 29795 99.99
OEAV624813 SARS-CoV-2/Neovison vison/USA/WI-CDC-CWSV-2212/2020 MW626382 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2020-10-15 Neovison vison 29829 2021-02-18 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Zhang,J., Li,Y., Lynch,B., Tao,Y., Queen,K., Montmayeur,A., Uehara,A., Cook,P., Ng,H.J., Marine,R., Paden,C.R., Wang,H. and Tong,S. Respiratory Viruses Branch, Centers for Disease Control and Prevention 29753 99.75
OEAV624814 SARS-CoV-2/Neovison vison/USA/WI-CDC-CWTH-2425/2020 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes MW626401 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2020-10-15 Neovison vison 29815 2021-02-18 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Zhang,J., Li,Y., Lynch,B., Tao,Y., Queen,K., Montmayeur,A., Uehara,A., Cook,P., Ng,H.J., Marine,R., Paden,C.R., Wang,H. and Tong,S. Respiratory Viruses Branch, Centers for Disease Control and Prevention 29412 98.65
OEAV624815 SARS-CoV-2/Neovison vison/USA/WI-CDC-CWV3-2216/2020 MW626383 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2020-10-15 Neovison vison 29797 2021-02-18 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Zhang,J., Li,Y., Lynch,B., Tao,Y., Queen,K., Montmayeur,A., Uehara,A., Cook,P., Ng,H.J., Marine,R., Paden,C.R., Wang,H. and Tong,S. Respiratory Viruses Branch, Centers for Disease Control and Prevention 29797 100.00
OEAV624816 SARS-CoV-2/Neovison vison/USA/WI-CDC-CWWU-2430/2020 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes MW626402 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2020-10-15 Neovison vison 29780 2021-02-18 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Zhang,J., Li,Y., Lynch,B., Tao,Y., Queen,K., Montmayeur,A., Uehara,A., Cook,P., Ng,H.J., Marine,R., Paden,C.R., Wang,H. and Tong,S. Respiratory Viruses Branch, Centers for Disease Control and Prevention 29336 98.51
OEAV624817 SARS-CoV-2/Neovison vison/USA/WI-CDC-CWXY-2431/2020 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes MW626403 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2020-10-15 Neovison vison 29780 2021-02-18 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Zhang,J., Li,Y., Lynch,B., Tao,Y., Queen,K., Montmayeur,A., Uehara,A., Cook,P., Ng,H.J., Marine,R., Paden,C.R., Wang,H. and Tong,S. Respiratory Viruses Branch, Centers for Disease Control and Prevention 29485 99.01
OEAV624818 SARS-CoV-2/Neovison vison/USA/WI-CDC-CWYZ-2306/2020 MW626399 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2020-10-15 Neovison vison 29796 2021-02-18 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Zhang,J., Li,Y., Lynch,B., Tao,Y., Queen,K., Montmayeur,A., Uehara,A., Cook,P., Ng,H.J., Marine,R., Paden,C.R., Wang,H. and Tong,S. Respiratory Viruses Branch, Centers for Disease Control and Prevention 29795 100.00
OEAV624819 SARS-CoV-2/Neovison vison/USA/WI-CDC-CX0O-2226/2020 MW626384 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2020-10-15 Neovison vison 29797 2021-02-18 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Zhang,J., Li,Y., Lynch,B., Tao,Y., Queen,K., Montmayeur,A., Uehara,A., Cook,P., Ng,H.J., Marine,R., Paden,C.R., Wang,H. and Tong,S. Respiratory Viruses Branch, Centers for Disease Control and Prevention 29797 100.00
OEAV624820 SARS-CoV-2/Neovison vison/USA/WI-CDC-CX2X-2436/2020 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), and surface glycoprotein (S) genes, complete cds; ORF3a protein (ORF3a) gene, partial cds; envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), and ORF8 protein (ORF8) genes, complete cds; and nucleocapsid phosphoprotein (N) and ORF10 protein (ORF10) genes MW626404 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2020-10-15 Neovison vison 29823 2021-02-18 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Zhang,J., Li,Y., Lynch,B., Tao,Y., Queen,K., Montmayeur,A., Uehara,A., Cook,P., Ng,H.J., Marine,R., Paden,C.R., Wang,H. and Tong,S. Respiratory Viruses Branch, Centers for Disease Control and Prevention 27043 90.68
OEAV624821 SARS-CoV-2/Neovison vison/USA/WI-CDC-CX4L-2439/2020 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes MW626405 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2020-10-15 Neovison vison 29818 2021-02-18 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Zhang,J., Li,Y., Lynch,B., Tao,Y., Queen,K., Montmayeur,A., Uehara,A., Cook,P., Ng,H.J., Marine,R., Paden,C.R., Wang,H. and Tong,S. Respiratory Viruses Branch, Centers for Disease Control and Prevention 29127 97.68
OEAV624822 SARS-CoV-2/Neovison vison/USA/WI-CDC-CX5N-2235/2020 MW626385 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2020-10-15 Neovison vison 29779 2021-02-18 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Zhang,J., Li,Y., Lynch,B., Tao,Y., Queen,K., Montmayeur,A., Uehara,A., Cook,P., Ng,H.J., Marine,R., Paden,C.R., Wang,H. and Tong,S. Respiratory Viruses Branch, Centers for Disease Control and Prevention 29778 100.00
OEAV624823 SARS-CoV-2/Neovison vison/USA/WI-CDC-CX6R-2237/2020 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes MW626386 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2020-10-15 Neovison vison 29797 2021-02-18 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Zhang,J., Li,Y., Lynch,B., Tao,Y., Queen,K., Montmayeur,A., Uehara,A., Cook,P., Ng,H.J., Marine,R., Paden,C.R., Wang,H. and Tong,S. Respiratory Viruses Branch, Centers for Disease Control and Prevention 29419 98.73
OEAV624824 SARS-CoV-2/Neovison vison/USA/WI-CDC-CX7Y-2442/2020 MW626406 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2020-10-15 Neovison vison 29817 2021-02-18 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Zhang,J., Li,Y., Lynch,B., Tao,Y., Queen,K., Montmayeur,A., Uehara,A., Cook,P., Ng,H.J., Marine,R., Paden,C.R., Wang,H. and Tong,S. Respiratory Viruses Branch, Centers for Disease Control and Prevention 29728 99.70
OEAV624825 SARS-CoV-2/Neovison vison/USA/WI-CDC-CX8H-2443/2020 MW626407 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2020-10-15 Neovison vison 29797 2021-02-18 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Zhang,J., Li,Y., Lynch,B., Tao,Y., Queen,K., Montmayeur,A., Uehara,A., Cook,P., Ng,H.J., Marine,R., Paden,C.R., Wang,H. and Tong,S. Respiratory Viruses Branch, Centers for Disease Control and Prevention 29796 100.00
OEAV624826 SARS-CoV-2/Neovison vison/USA/WI-CDC-CX9K-2242/2020 MW626387 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2020-10-15 Neovison vison 29797 2021-02-18 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Zhang,J., Li,Y., Lynch,B., Tao,Y., Queen,K., Montmayeur,A., Uehara,A., Cook,P., Ng,H.J., Marine,R., Paden,C.R., Wang,H. and Tong,S. Respiratory Viruses Branch, Centers for Disease Control and Prevention 29797 100.00
OEAV624827 SARS-CoV-2/Neovison vison/USA/WI-CDC-CXA4-2243/2020 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes MW626388 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2020-10-15 Neovison vison 29797 2021-02-18 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Zhang,J., Li,Y., Lynch,B., Tao,Y., Queen,K., Montmayeur,A., Uehara,A., Cook,P., Ng,H.J., Marine,R., Paden,C.R., Wang,H. and Tong,S. Respiratory Viruses Branch, Centers for Disease Control and Prevention 29241 98.13
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