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病毒基因组
基因组编号 毒株名称 引用编号 病毒类型 物种名称 采样国家 采样时间 宿主 序列长度 发布时间 分离来源 物种ID 种名 属名 科名 数据源 采样单位 采样地址 提交者 提交者单位 覆盖度 有效碱基数量 有效碱基百分比
OEAV9257925 hCoV-19/lion/PuertoRico/PR-21-31013-001/2021 EPI_ISL_5886784 RNA virus Severe acute respiratory syndrome coronavirus 2 Puerto Rico 2021-10-13 Panthera leo 29824 2021-11-03 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA APHIS VS Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 29824 100.00
OEAV9257926 hCoV-19/lion/PuertoRico/PR-21-31013-006/2021 EPI_ISL_5886785 RNA virus Severe acute respiratory syndrome coronavirus 2 Puerto Rico 2021-10-13 Panthera leo 29790 2021-11-03 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA APHIS VS Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 29790 100.00
OEAV9257929 hCoV-19/lion/USA/CO-21-031946-003/2021 EPI_ISL_6088018 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-10-14 Panthera leo 29788 2021-11-09 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Colorado State University Veterinary Diagnostic Laboratory Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 29788 100.00
OEAV9257931 hCoV-19/lion/USA/CO-21-031946-005/2021 EPI_ISL_6088026 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-10-14 Panthera leo 29828 2021-11-09 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Colorado State University Veterinary Diagnostic Laboratory Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 29828 100.00
OEAV9257932 hCoV-19/lion/USA/CO-21-031946-006/2021 EPI_ISL_6088034 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-10-14 Panthera leo 29828 2021-11-09 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Colorado State University Veterinary Diagnostic Laboratory Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 29828 100.00
OEAV9257933 hCoV-19/lion/USA/CO-21-031946-007/2021 EPI_ISL_6088040 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-10-14 Panthera leo 29827 2021-11-09 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Colorado State University Veterinary Diagnostic Laboratory Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 29827 100.00
OEAV9257934 hCoV-19/lion/USA/CO-21-031946-008/2021 EPI_ISL_6088041 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-10-14 Panthera leo 29827 2021-11-09 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Colorado State University Veterinary Diagnostic Laboratory Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 29827 100.00
OEAV9257935 hCoV-19/lion/USA/CO-21-031946-009/2021 EPI_ISL_6088044 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-10-14 Panthera leo 29826 2021-11-09 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Colorado State University Veterinary Diagnostic Laboratory Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 29826 100.00
OEAV9257938 hCoV-19/lion/USA/HI-21-031374-001/2021 EPI_ISL_5937176 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-10-04 Panthera leo 29828 2021-11-05 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Veterinary Diagnostic Laboratory University of Illinois at Urbana-Champaign Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 29828 100.00
OEAV9257939 hCoV-19/lion/USA/HI-21-031374-002/2021 EPI_ISL_5937177 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-10-11 Panthera leo 29804 2021-11-05 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Veterinary Diagnostic Laboratory University of Illinois at Urbana-Champaign Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 29804 100.00
OEAV9257940 hCoV-19/lion/USA/IL-21-029401-005/2021 EPI_ISL_5899818 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-09-28 Panthera leo 29862 2021-11-03 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Veterinary Diagnostic Laboratory University of Illinois at Urbana-Champaign Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 29862 100.00
OEAV9257941 hCoV-19/lion/USA/IN-21-030962-003/2021 EPI_ISL_5937175 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-10-10 Panthera leo 29789 2021-11-05 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Veterinary Diagnostic Laboratory University of Illinois at Urbana-Champaign Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 29695 99.68
OEAV9257942 hCoV-19/lion/USA/OH-21-029137-001/2021 EPI_ISL_5899817 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-09-28 Panthera leo 29791 2021-11-03 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Ohio Animal Disease Diagnostic Laboratory Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 29791 100.00
OEAV9257943 hCoV-19/lion/USA/UT-21-031970-001/2021 EPI_ISL_6088056 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-10-20 Panthera leo 29828 2021-11-09 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 29828 100.00
OEAV9257944 hCoV-19/lion/USA/UT-21-031970-003/2021 EPI_ISL_6088063 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-10-20 Panthera leo 29834 2021-11-09 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 29834 100.00
OEAV9257945 hCoV-19/lion/USA/UT-21-031970-004/2021 EPI_ISL_6088070 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-10-20 Panthera leo 29829 2021-11-09 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 29829 100.00
OEAV9257946 hCoV-19/lion/USA/UT-21-031970-005/2021 EPI_ISL_6088078 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-10-20 Panthera leo 29843 2021-11-09 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 29843 100.00
OEAV9287157 hCoV-19/snowleopard/USA/IL-21-029401-002/2021 EPI_ISL_5899827 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-09-28 Panthera uncia 29789 2021-11-03 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Veterinary Diagnostic Laboratory University of Illinois at Urbana-Champaign Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 29789 100.00
OEAV9287158 hCoV-19/snowleopard/USA/IL-21-029401-007/2021 EPI_ISL_5899828 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-09-28 Panthera uncia 29846 2021-11-03 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Veterinary Diagnostic Laboratory University of Illinois at Urbana-Champaign Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 29846 100.00
OEAV9302543 hCoV-19/tiger/USA/SD-21-029378-001/2021 EPI_ISL_5899822 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-09-30 Panthera tigris tigris 29828 2021-11-03 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 29828 100.00
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