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病毒基因组
基因组编号 毒株名称 引用编号 病毒类型 物种名称 采样国家 采样时间 宿主 序列长度 发布时间 分离来源 物种ID 种名 属名 科名 数据源 采样单位 采样地址 提交者 提交者单位 覆盖度 有效碱基数量 有效碱基百分比
OEAV179578 hCoV-19/env/Italy/3233/2020 EPI_ISL_458009 RNA virus Severe acute respiratory syndrome coronavirus 2 Italy 2020-02-28 environmental samples 287 2020-06-02 Raw sewage 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID La Rosa,G., Iaconelli,M., Mancini,P., Bonanno Ferraro,G., Veneri,C., Bonadonna,L., Lucentini,L., Suffredini,E. Department of Food Safety 287 100.00
OEAV179579 hCoV-19/env/Italy/3243-2/2020 EPI_ISL_458014 RNA virus Severe acute respiratory syndrome coronavirus 2 Italy 2020-02-28 environmental samples 469 2020-06-02 Raw sewage 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID La Rosa,G., Iaconelli,M., Mancini,P., Bonanno Ferraro,G., Veneri,C., Bonadonna,L., Lucentini,L., Suffredini,E. Department of Food Safety 469 100.00
OEAV179580 hCoV-19/env/Italy/3243/2020 EPI_ISL_458010 RNA virus Severe acute respiratory syndrome coronavirus 2 Italy 2020-02-28 environmental samples 287 2020-06-02 Raw sewage 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID La Rosa,G., Iaconelli,M., Mancini,P., Bonanno Ferraro,G., Veneri,C., Bonadonna,L., Lucentini,L., Suffredini,E. Department of Food Safety 287 100.00
OEAV179581 hCoV-19/env/Italy/3267/2020 EPI_ISL_458008 RNA virus Severe acute respiratory syndrome coronavirus 2 Italy 2020-03-30 environmental samples 287 2020-06-02 Raw sewage 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID La Rosa,G., Iaconelli,M., Mancini,P., Bonanno Ferraro,G., Veneri,C., Bonadonna,L., Lucentini,L., Suffredini,E. Department of Food Safety 287 100.00
OEAV179582 hCoV-19/env/Italy/3268/2020 EPI_ISL_458011 RNA virus Severe acute respiratory syndrome coronavirus 2 Italy 2020-03-30 environmental samples 287 2020-06-02 Raw sewage 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID La Rosa,G., Iaconelli,M., Mancini,P., Bonanno Ferraro,G., Veneri,C., Bonadonna,L., Lucentini,L., Suffredini,E. Department of Food Safety 287 100.00
OEAV179583 hCoV-19/env/Italy/3269/2020 EPI_ISL_458012 RNA virus Severe acute respiratory syndrome coronavirus 2 Italy 2020-04-30 environmental samples 287 2020-06-02 Raw sewage 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID La Rosa,G., Iaconelli,M., Mancini,P., Bonanno Ferraro,G., Veneri,C., Bonadonna,L., Lucentini,L., Suffredini,E. Department of Food Safety 287 100.00
OEAV179584 hCoV-19/env/Italy/3270-2/2020 EPI_ISL_458015 RNA virus Severe acute respiratory syndrome coronavirus 2 Italy 2020-04-30 environmental samples 469 2020-06-02 Raw sewage 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID La Rosa,G., Iaconelli,M., Mancini,P., Bonanno Ferraro,G., Veneri,C., Bonadonna,L., Lucentini,L., Suffredini,E. Department of Food Safety 469 100.00
OEAV179585 hCoV-19/env/Italy/3270/2020 EPI_ISL_458013 RNA virus Severe acute respiratory syndrome coronavirus 2 Italy 2020-04-30 environmental samples 287 2020-06-02 Raw sewage 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID La Rosa,G., Iaconelli,M., Mancini,P., Bonanno Ferraro,G., Veneri,C., Bonadonna,L., Lucentini,L., Suffredini,E. Department of Food Safety 287 100.00
OEAV172006 hCoV-19/env/USA/FL-UF11/2020 EPI_ISL_447900 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2020-02-21 environmental samples 29894 2020-05-15 Door handle 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Lednicky Laboratory at Emerging Pathogens Institute 2055 Mowry Rd. Gainesville, Florida Zip Code 32608 Lednicky,J.A., Gibson,J.C., Alam,M.M., Stephenson,C.J., Elbadry,M.A. and Morris,J.G. Environmental and Global Health 29894 100.00
OEAV159593 hCoV-19/env/USA/MT-BWRF-0327/2020 EPI_ISL_437434 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2020-03-27 environmental samples 29903 2020-05-08 Wastewater 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Bozeman Water Reclamation Facility 2245 Springhill Rd, Bozeman, MT, 59715 Artem Nemudryi, Anna Nemudraia, Kevin Surya, Tanner Wiegand, Murat Buyukyoruk, Royce Wilkinson, Blake Wiedenheft Wiedenheft lab, Montana State University 6,875x (average) 29458 98.51
OEAV158860 hCoV-19/env/USA/FL-UF3/2020 EPI_ISL_434677 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2020-03-25 environmental samples 29889 2020-04-30 Breathing air using VIVAs Air sampler 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Lednicky Laboratory at Emerging Pathogens Institute 2055 Mowry Rd. Gainesville, Florida Zip Code 32608 Shankar,S.N., Wu,C.-Y., Clugston,J.R., Elbadry,M.A., Morris,J.G. Jr. and Lednicky,J.A. Lednicky Laboratory at Emerging Pathogens Institute 29889 100.00
OEAV152888 hCoV-19/Beijing/BJ2452/2020 EPI_ISL_430743 RNA virus Severe acute respiratory syndrome coronavirus 2 China 2020-03-14 environmental samples 29782 2020-04-27 Enviromental swab 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Center for Disease prevetion and Control of PLA Dongda street 20#, Fengtai district, Beijing, China Peng Li,Jinhui Li, Lizhong Li Center for Disease prevetion and Control of PLA 4,389x 29782 100.00
OEAV152889 hCoV-19/Beijing/BJ2454/2020 EPI_ISL_430744 RNA virus Severe acute respiratory syndrome coronavirus 2 China 2020-03-14 environmental samples 29778 2020-04-27 Enviromental swab 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Center for Disease prevetion and Control of PLA Dongda street 20#, Fengtai district, Beijing, China Peng Li,Jinhui Li, Lizhong Li Center for Disease prevetion and Control of PLA 4,635x 29526 99.15
OEAV152890 hCoV-19/Beijing/BJ2456/2020 EPI_ISL_430745 RNA virus Severe acute respiratory syndrome coronavirus 2 China 2020-03-14 environmental samples 29732 2020-04-27 Enviromental swab 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Center for Disease prevetion and Control of PLA Dongda street 20#, Fengtai district, Beijing, China Peng Li,Jinhui Li, Lizhong Li Center for Disease prevetion and Control of PLA 3,828x 29620 99.62
OEAV152891 hCoV-19/Beijing/BJ2460/2020 EPI_ISL_430746 RNA virus Severe acute respiratory syndrome coronavirus 2 China 2020-03-14 environmental samples 29782 2020-04-27 Enviromental swab 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Center for Disease prevetion and Control of PLA Dongda street 20#, Fengtai district, Beijing, China Peng Li,Jinhui Li, Lizhong Li Center for Disease prevetion and Control of PLA 4,956x 29744 99.87
OEAV154703 hCoV-19/Italy/HSacco-1/2020 EPI_ISL_429874 RNA virus Severe acute respiratory syndrome coronavirus 2 Italy 2020-04-14 environmental samples 29903 2020-04-24 Untreated wastewater 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Microbiology, Virology and Biemergency Laboratory-ASST FBF Sacco Giovanni Battista Grassi Street, 74, 20157 Milan Rimoldi SG, Stefani F Microbiology, Virology and Biemergency Laboratory-ASST FBF Sacco 9.64x 25268 84.50
OEAV000155 hCoV-19/Shandong/LY-H13/2020 EPI_ISL_412425 RNA virus Severe acute respiratory syndrome coronavirus 2 China 2020-01-26 environmental samples 321 2020-02-25 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Shandong Provincial Center for Disease Control and Prevention Shandong Provincial Center for Disease Control and Prevention Xiao-Lin Jiang, Wen-Kui Sun, Xiang-Na Zhao, Yang Hang, Zeng-Qiang Kou, Lin-Yao, Li-Jun Duan, Xiao Wei, Dian-Ming Kang, Mai-Juan Ma Beijing Institute of Microbiology and Epidemiology 321 100.00
OEAV000156 hCoV-19/Shandong/LY-H15/2020 EPI_ISL_412426 RNA virus Severe acute respiratory syndrome coronavirus 2 China 2020-01-26 environmental samples 321 2020-02-25 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Shandong Provincial Center for Disease Control and Prevention Shandong Provincial Center for Disease Control and Prevention Xiao-Lin Jiang, Wen-Kui Sun, Xiang-Na Zhao, Yang Hang, Zeng-Qiang Kou, Lin-Yao, Li-Jun Duan, Xiao Wei, Dian-Ming Kang, Mai-Juan Ma Beijing Institute of Microbiology and Epidemiology 321 100.00
OEAV000253 hCoV-19/Wuhan/IVDC-HB-envB5/2020 EPI_ISL_408513 RNA virus Severe acute respiratory syndrome coronavirus 2 China 2020-01-01 environmental samples 1065 2020-02-09 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Institute of Viral Disease Control and Prevention, China CDC 155 Changbai Road, Changping District, 102206 Beijing William J. Liu, Peipei Liu, Xiang Zhao, Peihua Niu, Yingze Zhao, Wenwen Lei, Ziqian Xu, Beiwei Ye, Weifeng Shi, Roujian Lu, Wenjie Tan, Zhixiao Chen, Yuchao Wu, Juan Song, Dayan Wang, Jun Han, Wenbo Xu, George F. Gao, Guizhen Wu Institute of Viral Disease Control and Prevention, China CDC 2.4 1064 99.91
OEAV000254 hCoV-19/Wuhan/IVDC-HB-envF13-20/2020 EPI_ISL_408514 RNA virus Severe acute respiratory syndrome coronavirus 2 China 2020-01-01 environmental samples 29891 2020-02-09 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Institute of Viral Disease Control and Prevention, China CDC 155 Changbai Road, Changping District, 102206 Beijing William J. Liu, Peipei Liu, Xiang Zhao, Peihua Niu, Yingze Zhao, Wenwen Lei, Ziqian Xu, Shumei Zou, Wei Zhen, Beiwei Ye, Mengjie Yang, Weifeng Shi, Roujian Lu, Wenjie Tan, Zhixiao Chen, Yuchao Wu, Juan Song, Weimin Zhou, Dayan Wang, Jun Han, Wenbo Xu, George F. Gao, Guizhen Wu Institute of Viral Disease Control and Prevention, China CDC 29891 100.00
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