Chryseobacterium Vandamme et al. 1994
General information
Description and emendation
cells are gram-negative, nonmotile, non-spore-forming rods with parallel sides and rounded ends; typically the cells are 0.5 µm wide and 1 to 3 µm long. Intracellular granules of poly-β-hydroxybutyrate are absent. Aerobic. Chemoorganotrophic. All strains grow at 30°C; most strains grow at 37°C. Growth on solid media is typically pigmented (yellow to orange), but nonpigmented strains occur. Colonies are translucent (occasionally opaque), circular, convex or low convex, smooth, and shiny, with entire edges. Positive for catalase, oxidase, and phosphatase activities. Several carbohydrates, including glycerol and trehalose, are oxidized. Strong proteolytic activity occurs. Esculin is hydrolyzed. Agar is not digested. Resistant to a wide range of antimicrobial agents. Branched-chain fatty acids (i.e., C15:0 iso, iso C17:1 ω9c, C17:0 iso 3OH, and summed feature 4 [C15:0 iso 2OH or C16:1 ω7t or both]) are predominant. Sphingophospholipids are absent. Menaquinone 6 is the only respiratory quinone. Homospermidine and 2-hydroxyputrescine are the major polyamines in Chryseobacterium indologenes, whereas putrescine and agmatine are minor components. The DNA base composition ranges from 33 to 38 mol% G+C. Chryseobacterium species are widely distributed in soil, water, and clinical sources.
1: The major polyamine is sym-homospermidine.
2: Phosphatidylethanolamine is the major polar lipid.
3: In addition to phosphatidylethanolamine, the polarlipid profile contains three common unknown lipids and two common unknown aminolipids. Vandamme et al. report that the major fatty acids are iso-C15:0, iso-C17:1 ω9c, iso-C17:0 3-OH, and summed feature 4 (iso-C15:0 2-OH or C16:1 ω7t or both), with the annotation coming from an unspecified version of the MIDI system. While the designation of summed feature 4 (iso-C15:0 2-OH or C16:1 ω7t or both) is clearly different from the annotation of summed feature 3 (iso-C15:0 2-OH or C16:1 ω7c or both as well as C16:1 ω6c or C16:1 ω7c or both) earlier work and subsequentmass spectrometric studies indicate that iso-C15:0 2-OH is presentand C16:1 ω7t/C16:1 ω6c/C16:1 ω7c are absent. Similarly, the fatty acid identified as iso-C17:1 ω9c (which more recent version of the MIDI system may report as summed feature 9: iso-C17:1 ω9c/C16:0 10-methyl) appears to be iso-C17:1 ω7c. Consequently the major branched-chain fatty acids are iso-C15:0, iso-C17:1 ω7c (that may being correctly annotated in the previous work), iso-C17:0 3-OH and iso-C15:0 2-OH (annotated as part of summed feature 3; but may also be annotated as summed feature 4, depending on the version of the MIDI system and the peak naming tables used).
4: Phosphatidylethanolamine is not always present as a major component in the polar lipid profile; the lipid profiles of some species may consist of aminolipids and unidentified lipids.
5: Almost all strains grow at 30°C. Most, but not all, strains oxidize glycerol and trehalose.
Subdivision(s)
MID | Name | Rank | Taxon ID |
---|---|---|---|
MSG095355 | 'Chryseobacterium bacterium' | Species | |
MSG084151 | 'Chryseobacterium sp. ' | Species | |
M020504010429002 | Chryseobacterium aahli | Species | 1278643 |
M020504010429003 | Chryseobacterium angstadtii | Species | 558151 |
M020504010429004 | Chryseobacterium antarcticum | Species | 266748 |
M020504010429005 | Chryseobacterium anthropi | Species | 520603 |
M020504010429006 | Chryseobacterium aquaticum | Species | 452084 |
M020504010429007 | Chryseobacterium aquifrigidense | Species | 558021 |
M020504010429008 | Chryseobacterium arachidiradicis | Species | 1617282 |
M020504010429009 | Chryseobacterium arachidis | Species | 1416778 |
M020504010429010 | Chryseobacterium arthrosphaerae | Species | 651561 |
M020504010429011 | Chryseobacterium artocarpi | Species | 1414727 |
M020504010429012 | Chryseobacterium aurantiacum | Species | 2116499 |
M020504010429113 | Chryseobacterium aureum | Species | |
M020504010429013 | Chryseobacterium balustinum | Species | 246 |
M020504010429014 | Chryseobacterium bernardetii | Species | 1241978 |
M020504010429015 | Chryseobacterium bovis | Species | 421530 |
M020504010429016 | Chryseobacterium caeni | Species | 365343 |
M020504010429017 | Chryseobacterium camelliae | Species | 1265445 |
M020504010429018 | Chryseobacterium carnipullorum | Species | 1124835 |
M020504010429019 | Chryseobacterium carnis | Species | 1241979 |
M020504010429020 | Chryseobacterium chaponense | Species | 713588 |
M020504010429021 | Chryseobacterium contaminans | Species | 1423959 |
M020504010429022 | Chryseobacterium cucumeris | Species | 1813611 |
M020504010429023 | Chryseobacterium culicis | Species | 680127 |
M020504010429024 | Chryseobacterium daecheongense | Species | 192389 |
M020504010429025 | Chryseobacterium daeguense | Species | 412438 |
M020504010429026 | Chryseobacterium defluvii | Species | 160396 |
M020504010429027 | Chryseobacterium echinoideorum | Species | 1549648 |
M020504010429028 | Chryseobacterium elymi | Species | 395936 |
M020504010429029 | Chryseobacterium endophyticum | Species | 1854762 |
M020504010429030 | Chryseobacterium flavum | Species | 415851 |
M020504010429031 | Chryseobacterium formosense | Species | 236814 |
M020504010429032 | Chryseobacterium frigidisoli | Species | 1125876 |
M020504010429033 | Chryseobacterium frigidum | Species | 1593234 |
M020504010429034 | Chryseobacterium gallinarum | Species | 1324352 |
M020504010429035 | Chryseobacterium gambrini | Species | 373672 |
M020504010429036 | Chryseobacterium geocarposphaerae | Species | 1416776 |
M020504010429037 | Chryseobacterium ginsengisoli | Species | 363853 |
M020504010429038 | Chryseobacterium ginsengiterrae | Species | 1245592 |
M020504010429039 | Chryseobacterium ginsenosidimutans | Species | 687846 |
M020504010429040 | Chryseobacterium glaciei | Species | 1685010 |
M020504010428001 | Chryseobacterium gleum | Species | 250 |
M020504010429041 | Chryseobacterium greenlandense | Species | 345663 |
M020504010429042 | Chryseobacterium gregarium | Species | 456299 |
M020504010429043 | Chryseobacterium gwangjuense | Species | 1069980 |
M020504010429044 | Chryseobacterium hagamense | Species | 395935 |
M020504010429045 | Chryseobacterium haifense | Species | 421525 |
M020504010429046 | Chryseobacterium halperniae | Species | 421072 |
M020504010429047 | Chryseobacterium hispalense | Species | 1453492 |
M020504010429048 | Chryseobacterium hispanicum | Species | 358687 |
M020504010429049 | Chryseobacterium hominis | Species | 420404 |
M020504010429050 | Chryseobacterium humi | Species | 493375 |
M020504010429051 | Chryseobacterium hungaricum | Species | 454006 |
M020504010429052 | Chryseobacterium indologenes | Species | 253 |
M020504010429053 | Chryseobacterium indoltheticum | Species | 254 |
M020504010429054 | Chryseobacterium jejuense | Species | 445960 |
M020504010429055 | Chryseobacterium jeonii | Species | 266749 |
M020504010429056 | Chryseobacterium joostei | Species | 112234 |
M020504010429057 | Chryseobacterium koreense | Species | 232216 |
M020504010429058 | Chryseobacterium kwangjuense | Species | 267125 |
M020504010429059 | Chryseobacterium lactis | Species | 1241981 |
M020504010429060 | Chryseobacterium lathyri | Species | 395933 |
M020504010429061 | Chryseobacterium limigenitum | Species | 1612149 |
M020504010429062 | Chryseobacterium lineare | Species | 1859201 |
M020504010429063 | Chryseobacterium luteum | Species | 421531 |
M020504010429064 | Chryseobacterium marinum | Species | 442733 |
M020504010429065 | Chryseobacterium molle | Species | 216903 |
M020504010429066 | Chryseobacterium montanum | Species | 1849733 |
M020504010429067 | Chryseobacterium nakagawai | Species | 1241982 |
M020504010429068 | Chryseobacterium nepalense | Species | 1854498 |
M020504010429069 | Chryseobacterium oleae | Species | 491207 |
M020504010429070 | Chryseobacterium oncorhynchi | Species | 741074 |
M020504010429071 | Chryseobacterium oranimense | Species | 421058 |
M020504010429072 | Chryseobacterium pallidum | Species | 373671 |
M020504010429073 | Chryseobacterium palustre | Species | 493376 |
M020504010429112 | Chryseobacterium phosphatilyticum | Species | |
M020504010429074 | Chryseobacterium piperi | Species | 558152 |
M020504010429075 | Chryseobacterium piscicola | Species | 551459 |
M020504010429076 | Chryseobacterium piscium | Species | 333702 |
M020504010429077 | Chryseobacterium polytrichastri | Species | 1302687 |
M020504010429111 | Chryseobacterium populi | Species | |
M020504010429078 | Chryseobacterium profundimaris | Species | 1387275 |
M020504010429079 | Chryseobacterium psychrotolerans | Species | 343642 |
M020504010429080 | Chryseobacterium reticulitermitis | Species | 1907530 |
M020504010429081 | Chryseobacterium rhizoplanae | Species | 1609531 |
M020504010429082 | Chryseobacterium rhizosphaerae | Species | 395937 |
M020504010429083 | Chryseobacterium rigui | Species | 1132696 |
M020504010429084 | Chryseobacterium salipaludis | Species | 1961642 |
M020504010429085 | Chryseobacterium scophthalmum | Species | 59733 |
M020504010429086 | Chryseobacterium sediminis | Species | 1679494 |
M020504010429087 | Chryseobacterium shandongense | Species | 1493872 |
M020504010429088 | Chryseobacterium shigense | Species | 297244 |
M020504010429090 | Chryseobacterium solani | Species | 1393046 |
M020504010429089 | Chryseobacterium soldanellicola | Species | 311333 |
M020504010429091 | Chryseobacterium soli | Species | 445961 |
M020504010429092 | Chryseobacterium solincola | Species | 510955 |
M020504010429093 | Chryseobacterium taeanense | Species | 311334 |
M020504010429094 | Chryseobacterium taichungense | Species | 295069 |
M020504010429095 | Chryseobacterium taihuense | Species | 1141221 |
M020504010429096 | Chryseobacterium taiwanense | Species | 363331 |
M020504010429097 | Chryseobacterium takakiae | Species | 1302685 |
M020504010429098 | Chryseobacterium taklimakanense | Species | 536441 |
M020504010429099 | Chryseobacterium tenax | Species | 191577 |
M020504010429100 | Chryseobacterium treverense | Species | 631455 |
M020504010429101 | Chryseobacterium tructae | Species | 1037380 |
M020504010429102 | Chryseobacterium ureilyticum | Species | 373668 |
M020504010429103 | Chryseobacterium vietnamense | Species | 866785 |
M020504010429104 | Chryseobacterium viscerum | Species | 1037377 |
M020504010429105 | Chryseobacterium vrystaatense | Species | 307480 |
M020504010429106 | Chryseobacterium wanjuense | Species | 356305 |
M020504010429107 | Chryseobacterium xinjiangense | Species | 343412 |
M020504010429108 | Chryseobacterium xixisoli | Species | 1476462 |
M020504010429109 | Chryseobacterium yonginense | Species | 658267 |
M020504010429110 | Chryseobacterium zeae | Species | 1416779 |