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  • Genetic variants in Telomerase Reverse Transcriptase contribute to solar lentigines

    Sijia Wang, , 2021.12.08

    Description

    Aged individuals often show pigmentation changes in skin epithelium and its appendages. Among these phenotypes, Solar lentigines (SL), characterized by a localized accumulation of melanocytes in skin epidermis, are result from chronic sunlight exposure. Susceptibility to SL varies significantly among individuals, but the underlying genetic mechanisms were not well understood. Here we carried out GWAS of facial and non-facial SL in two East Asian and one Caucasian populations.

    Analysis type

    Other

    OEZ008165

  • CK1_MEGAHIT.assembly

    Xiaolan Lin, Xiamen University, 2023.05.17

    Analysis type

    De novo Assembly

    OEZ014093

  • N60_MEGAHIT.assembly

    Xiaolan Lin, Xiamen University, 2023.05.17

    Analysis type

    De novo Assembly

    OEZ014092

  • BN60_MEGAHIT.assembly

    Xiaolan Lin, Xiamen University, 2023.05.17

    Analysis type

    De novo Assembly

    OEZ014091

  • CK60_MEGAHIT.assembly

    Xiaolan Lin, Xiamen University, 2023.05.17

    Analysis type

    De novo Assembly

    OEZ014090

  • B60_MEGAHIT.assembly

    Xiaolan Lin, Xiamen University, 2023.05.17

    Analysis type

    De novo Assembly

    OEZ014094

  • T-ALL expression

    Yuting Dai, Shanghai Institute of Hematology, 2023.05.17

    Analysis type

    Other

    OEZ014089

  • Deep-rRNA

    Yu Zhang, , 2023.02.23

    Description

    Multiple sources including Greengenes (v4.8.1, 2019.5.1), RDP (v11.5, 2016.9.10), Rfam (v14.3, 2021.9), SILVA (v138, 2021.9), and NCBI 16S rRNA sequence (PRJNA33317, PRJNA33175) were downloaded and merged into a uniform format by scripts from riboPicker. The redundant rRNA sequences were further discarded using the prinseq-lite.pl from PRINSEQ after the sequence files were merged.

    Analysis type

    Other

    OEZ013256

  • Standard Genome Reference (Mock-Ref)

    Yu Zhang, , 2023.02.23

    Description

    This is the pooled reference genomes composed of 10 selected strains (Mock-Ref) used in MT-DeepSea.

    Analysis type

    Reference Alignment

    OEZ013255

  • MAG_93

    Yu Zhang, Shanghai Jiaotong University, 2022.03.30

    Analysis type

    Other

    OEZ008737