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  • Acid mine drainage virome

    Zhenghua Liu, , 2021.12.08

    Description

    Viral sequences identified from metagenomes and genomes data across global acid mine drainage.

    Analysis type

    Sequence Annotation

    OEZ008166

  • SMAG_MAGs

    Caiyu Lu, , 2023.06.14

    Description

    SMAG catalog

    Analysis type

    Other

    OEZ014109

  • gene_express

    fan wang, Ren Ji Hospital, School of Medicine, Shanghai Jiao Tong University, 2023.06.18

    Analysis type

    Other

    OEZ014114

  • OEZ_2303021024

    Junyu Luo, Shanghai Institute of Nutrition and Health, 2023.03.02

    Description

    Summary statistic of hair whorl direction

    Analysis type

    Other

    OEZ013261

  • OEZ_YUCHEN_2306051803

    Ran LIU, , 2023.06.05

    Analysis type

    Sequence Annotation

    OEZ014102

  • OEZ_YUCHEN_2306051752

    Ran LIU, , 2023.06.05

    Analysis type

    Abundance Measurement

    OEZ014100

  • ATAC_CPM_PRMTi1061

    Fei Li, , 2022.05.25

    Description

    Raw sequencing data were first trimmed to remove adaptors and low-quality reads using TrimGalore-0.5.0 with the following parameter settings: -q 25 --phred33 --length 35 -e 0.1 --stringency. Trimmed files were then mapped to hg19 genome utilizing Bowtie2. Sambamba_v0.6.6 was conducted for the removal of duplicates. DeepTools-3.2.1 was then performed using the function of bamCoverage to generate normalized CPM.bw files.

    Analysis type

    De Novo Assembly

    OEZ009048

  • ATAC_CPM_SPM

    Fei Li, , 2022.05.25

    Description

    Raw sequencing data were first trimmed to remove adaptors and low-quality reads using TrimGalore-0.5.0 with the following parameter settings: -q 25 --phred33 --length 35 -e 0.1 --stringency. Trimmed files were then mapped to hg19 genome utilizing Bowtie2. Sambamba_v0.6.6 was conducted for the removal of duplicates. DeepTools-3.2.1 was then performed using the function of bamCoverage to generate normalized CPM.bw files.

    Analysis type

    De Novo Assembly

    OEZ009047

  • ATAC_CPM_Vehicle

    Fei Li, , 2022.05.25

    Description

    Raw sequencing data were first trimmed to remove adaptors and low-quality reads using TrimGalore-0.5.0 with the following parameter settings: -q 25 --phred33 --length 35 -e 0.1 --stringency. Trimmed files were then mapped to hg19 genome utilizing Bowtie2. Sambamba_v0.6.6 was conducted for the removal of duplicates. DeepTools-3.2.1 was then performed using the function of bamCoverage to generate normalized CPM.bw files.

    Analysis type

    De Novo Assembly

    OEZ009045

  • ATAC_narrowpeaks

    Fei Li, , 2022.05.25

    Description

    MACS2-2.1.1 was then utilized with -q 0.05 parameter setting for peak calling.

    Analysis type

    De Novo Assembly

    OEZ009044