General Information
- Experiment ID
- OEX020246
- Experiment Name
- OEX_weifen_2208091005
- Experiment Type
- Transcriptomic
- Description
- Transcriptome Analysis
- Protocol
- Total RNA was isolated using TRIzol (Invitrogen, USA) according to the manufacturer's instructions. The RNA quality was assessed with Agilent 2100 Bioanalyzer. Samples with RNA Integrity Number (RIN) values greater than 7.5 were selected. 1 μg total RNA from PFC sample was used to construct the sequencing library following the TruSeq Stranded mRNA Sample Prep (Illumina, USA) protocol. The libraries were pooled and sequenced on Illumina HiSeq 4000 platform with the 150-bp singled-ended mode.
Experiment information
- Attributes
-
library_layout Single mate_pair n/a insertion_size n/a number_of_reads_sequenced n/a library_name n/a library_selection PCR library_strategy ssRNA-seq platform Illumina HiSeq 4000 - Project
-
1
Project ID Project name Create Date OEP003561 Epigenetic regulation of human-specific gene expression in prefrontal cortex 2022-08-07 - Samples
-
9
Sample ID Sample Name Organism Tissue Create Date OES233241 H602 Homo sapiens Prefrontal Cortex 2022-08-09 OES233242 H879 Homo sapiens Prefrontal Cortex 2022-08-09 OES233243 H933 Homo sapiens Prefrontal Cortex 2022-08-09 OES233244 CHerman Pan troglodytes Prefrontal Cortex 2022-08-09 OES233245 CJapie Pan troglodytes Prefrontal Cortex 2022-08-09 OES233246 CSnoy Pan troglodytes Prefrontal Cortex 2022-08-09 OES233247 M135 Macaca mulatta Prefrontal Cortex 2022-08-09 OES233248 M98145 Macaca mulatta Prefrontal Cortex 2022-08-09 OES233249 M99057 Macaca mulatta Prefrontal Cortex 2022-08-09 - Runs
-
9
Run ID Run Name Sample Data Num Create Date OER272068 OER_weifen_2208091126 H602 1 2022-08-09 OER272069 OER_weifen_2208091131 H879 1 2022-08-09 OER272070 OER_weifen_2208091133 H933 1 2022-08-09 OER272071 OER_weifen_2208091134 CHerman 1 2022-08-09 OER272072 OER_weifen_2208091136 CJapie 1 2022-08-09 OER272073 OER_weifen_2208091137 CSnoy 1 2022-08-09 OER272074 OER_weifen_2208091137 M135 1 2022-08-09 OER272075 OER_weifen_2208091137 M98145 1 2022-08-09 OER272076 OER_weifen_2208091137 M99057 1 2022-08-09
Author Information
- Create Date
- 2022-08-09
- Last Modified
- 2023-04-28
- Submission
- weifen sun
- CAS Key Laboratory of Computational Biology, Shanghai Institute of Nutrition and Health, University of Chinese Academy of Sciences, Chinese Academy of Sciences