General Information
- Experiment ID
- OEX021341
- Experiment Name
- Metatranscriptomics of MT-Enviro
- Experiment Type
- Metatranscriptomic
- Description
- RNA-seq of environmental mock communities
- Protocol
- Ribo-Zero™ rRNA Removal Kit; NEBNext® Ultra IITM Directional RNA Library Prep Kit for Illumina® with Illumina adapters
Experiment information
- Attributes
-
library_layout Paired mate_pair n/a insertion_size 150 number_of_reads_sequenced 4,170,347,376 library_name n/a library_selection RANDOM library_strategy RNA-Seq platform Illumina HiSeq 2500 - Project
-
1
Project ID Project name Create Date OEP003879 MT-Enviro 2023-02-23 - Samples
-
24
Sample ID Sample Name Organism Tissue Create Date OES295367 LR201224-0100_S20210112-0168_Ia1 marine metagenome N/A 2023-02-23 OES295368 LR201116-0056_S20201210-0159_Ia2 marine metagenome N/A 2023-02-23 OES295369 LR201116-0057_S20201210-0160_Ia3 marine metagenome N/A 2023-02-23 OES295370 LR201116-0058_S20201210-0161_Ib1 marine metagenome N/A 2023-02-23 OES295371 LR201128-0001_S20201210-0162_Ib2 marine metagenome N/A 2023-02-23 OES295372 LR201128-0002_S20201210-0163_Ib3 marine metagenome N/A 2023-02-23 OES295373 LR201128-0003_S20201210-0164_IIa1 marine metagenome N/A 2023-02-23 OES295374 LR201128-0004_S20201210-0165_IIa2 marine metagenome N/A 2023-02-23 OES295375 LR201128-0005_S20201210-0166_IIa3 marine metagenome N/A 2023-02-23 OES295376 LR201128-0009_S20201210-0170_III1 marine metagenome N/A 2023-02-23 OES295377 LR201128-0010_S20201210-0171_III2 marine metagenome N/A 2023-02-23 OES295378 LR201128-0011_S20201210-0172_III3 marine metagenome N/A 2023-02-23 OES295379 LR201128-0012_S20201210-0173_hIa1 marine metagenome N/A 2023-02-23 OES295380 LR201128-0013_S20201210-0174_hIa2 marine metagenome N/A 2023-02-23 OES295381 LR201128-0014_S20201210-0175_hIa3 marine metagenome N/A 2023-02-23 OES295382 LR201128-0015_S20201210-0176_hIb1 marine metagenome N/A 2023-02-23 OES295383 LR201128-0016_S20201210-0177_hIb2 marine metagenome N/A 2023-02-23 OES295384 LR201128-0017_S20201210-0178_hIb3 marine metagenome N/A 2023-02-23 OES295385 LR201128-0018_S20201210-0179_hIIa1 marine metagenome N/A 2023-02-23 OES295386 LR201128-0019_S20201210-0180_hIIa2 marine metagenome N/A 2023-02-23 OES295387 LR201128-0020_S20201210-0181_hIIa3 marine metagenome N/A 2023-02-23 OES295388 LR201128-0024_S20201210-0185_hIII1 marine metagenome N/A 2023-02-23 OES295389 LR201128-0025_S20201210-0186_hIII2 marine metagenome N/A 2023-02-23 OES295390 LR201128-0026_S20201210-0187_hIII3 marine metagenome N/A 2023-02-23 - Runs
-
24
Run ID Run Name Sample Data Num Create Date OER379031 LR201224-0100_S20210112-0168_Ia1 LR201224-0100_S20210112-0168_Ia1 2 2023-02-23 OER379032 LR201116-0056_S20201210-0159_Ia2 LR201116-0056_S20201210-0159_Ia2 2 2023-02-23 OER379033 LR201116-0057_S20201210-0160_Ia3 LR201116-0057_S20201210-0160_Ia3 2 2023-02-23 OER379034 LR201116-0058_S20201210-0161_Ib1 LR201116-0058_S20201210-0161_Ib1 2 2023-02-23 OER379035 LR201128-0001_S20201210-0162_Ib2 LR201128-0001_S20201210-0162_Ib2 2 2023-02-23 OER379036 LR201128-0002_S20201210-0163_Ib3 LR201128-0002_S20201210-0163_Ib3 2 2023-02-23 OER379037 LR201128-0003_S20201210-0164_IIa1 LR201128-0003_S20201210-0164_IIa1 2 2023-02-23 OER379038 LR201128-0004_S20201210-0165_IIa2 LR201128-0004_S20201210-0165_IIa2 2 2023-02-23 OER379039 LR201128-0005_S20201210-0166_IIa3 LR201128-0005_S20201210-0166_IIa3 2 2023-02-23 OER379040 LR201128-0009_S20201210-0170_III1 LR201128-0009_S20201210-0170_III1 2 2023-02-23 OER379041 LR201128-0010_S20201210-0171_III2 LR201128-0010_S20201210-0171_III2 2 2023-02-23 OER379042 LR201128-0011_S20201210-0172_III3 LR201128-0011_S20201210-0172_III3 2 2023-02-23 OER379043 LR201128-0012_S20201210-0173_hIa1 LR201128-0012_S20201210-0173_hIa1 2 2023-02-23 OER379044 LR201128-0013_S20201210-0174_hIa2 LR201128-0013_S20201210-0174_hIa2 2 2023-02-23 OER379045 LR201128-0014_S20201210-0175_hIa3 LR201128-0014_S20201210-0175_hIa3 2 2023-02-23 OER379046 LR201128-0015_S20201210-0176_hIb1 LR201128-0015_S20201210-0176_hIb1 2 2023-02-23 OER379047 LR201128-0016_S20201210-0177_hIb2 LR201128-0016_S20201210-0177_hIb2 2 2023-02-23 OER379048 LR201128-0017_S20201210-0178_hIb3 LR201128-0017_S20201210-0178_hIb3 2 2023-02-23 OER379049 LR201128-0018_S20201210-0179_hIIa1 LR201128-0018_S20201210-0179_hIIa1 2 2023-02-23 OER379050 LR201128-0019_S20201210-0180_hIIa2 LR201128-0019_S20201210-0180_hIIa2 2 2023-02-23 OER379051 LR201128-0020_S20201210-0181_hIIa3 LR201128-0020_S20201210-0181_hIIa3 2 2023-02-23 OER379052 LR201128-0024_S20201210-0185_hIII1 LR201128-0024_S20201210-0185_hIII1 2 2023-02-23 OER379053 LR201128-0025_S20201210-0186_hIII2 LR201128-0025_S20201210-0186_hIII2 2 2023-02-23 OER379054 LR201128-0026_S20201210-0187_hIII3 LR201128-0026_S20201210-0187_hIII3 2 2023-02-23
Author Information
- Create Date
- 2023-02-23
- Last Modified
- 2023-11-24
- Submission
- Yu Zhang
- Shanghai Jiaotong University