General Information
Project ID
OEP004324
Project Name
PUF60 regulated alternative splicing study in lung cancer
Description
Alternative splicing has been suggested to play important roles in cell cycle regulation and cancer, however the underlying echanisms are still lacking. This project examined the effects of PUF60 on the alternative splicing regulatory network in two human lung cancer cell lines: PC9 and A549. Both gene expression and alternative splicing pofiles were generated based on RNA-sequencing datasets from PUF60 knockdown lung cancer cell lines and the corresponding control samples. Our study found that PUF60 regulated the alternative splicing of the genes in lung cancer.
Project information
Experiments
8
Experiment ID
Experiment name
Experiment type
Create Date
OEX024518
OEX_Gangcai_2307300941
Transcriptomic
2023-07-30
OEX024519
OEX_Gangcai_2307300944
Genomic
2023-07-30
OEX024520
OEX_Gangcai_2307300946
Transcriptomic
2023-07-30
OEX024521
OEX_Gangcai_2307300947
Transcriptomic
2023-07-30
OEX024522
OEX_Gangcai_2307300948
Transcriptomic
2023-07-30
OEX024523
OEX_Gangcai_2307300950
Transcriptomic
2023-07-30
OEX024524
OEX_Gangcai_2307300951
Transcriptomic
2023-07-30
OEX024525
OEX_Gangcai_2307300952
Transcriptomic
2023-07-30
Samples
8
Sample ID
Sample Name
Sample Subject Type
Organism
Tissue
Create Date
OES318805
A549_siPUF60_siSeq2_R1
Cell line
Homo sapiens
cell line
2023-07-30
OES318806
A549_siPUF60_siSeq2_R2
Cell line
Homo sapiens
cell line
2023-07-30
OES318807
A549_siNC_siSeq2_R1
Cell line
Homo sapiens
cell line
2023-07-30
OES318808
A549_siNC_siSeq2_R2
Cell line
Homo sapiens
cell line
2023-07-30
OES318809
PC9_siPUF60_siSeq2_R1
Cell line
Homo sapiens
cell line
2023-07-30
OES318810
PC9_siPUF60_siSeq2_R2
Cell line
Homo sapiens
cell line
2023-07-30
OES318811
PC9_siNC_R1
Cell line
Homo sapiens
cell line
2023-07-30
OES318812
PC9_siNC_R2
Cell line
Homo sapiens
cell line
2023-07-30
Runs
8
Run ID
Run Name
Experiment
Sample
Data Num
Create Date
OER425436
OER_Gangcai_2307300944
OEX024518
OES318805
2
2023-07-30
OER425437
OER_Gangcai_2307300945
OEX024519
OES318806
2
2023-07-30
OER425438
OER_Gangcai_2307300947
OEX024520
OES318807
2
2023-07-30
OER425439
OER_Gangcai_2307300948
OEX024521
OES318808
2
2023-07-30
OER425440
OER_Gangcai_2307300950
OEX024522
OES318809
2
2023-07-30
OER425441
OER_Gangcai_2307300951
OEX024523
OES318810
2
2023-07-30
OER425442
OER_Gangcai_2307300952
OEX024524
OES318811
2
2023-07-30
OER425443
OER_Gangcai_2307300953
OEX024525
OES318812
2
2023-07-30
Author Information
Create Date
2023-07-30
Last Modified
2023-07-30
Submission
Gangcai Xie
Nantong University
