General Information
- Sample ID
- OES014481
- Sample Name
- FUSCCTNBC441
- Subject type
- Human
Sample information
- Organism
- Homo sapiens
- Tissue
- breast
- ATTRIBUTES
-
age_at_surgery 38 gender female dis_mol_type mRNA_subtype:BLIS,iCluster_subtype:iC3,SNF_Subtype:SC2 dis_phenotype Intrinsic_Subtype:Basal karyo_type CNA_Subtype:Chr12p13_amp - Projects
-
1
Project ID Project name Submitter Date OEP000155 Genomic and Transcriptomic Landscape of Triple-Negative Breast Cancers: Subtypes and Treatment Strategies. Ma, Ding 2018-08-10 - Experiments
-
7
Experiment ID Experiment name Experiment type Experiment protocol Date OEX001582 RNAseq Transcriptomic RNA library preparation was performed as described in the Illumina TruSeq Stranded Total RNA LT sample preparation kit with Ribo-Zero Gold (Illumina Inc., San Diego, CA, USA). 2019-01-29 OEX001583 WES Genomic N/A 2019-01-29 OEX001584 OncoScan Array Microarray Genome-wide copy number analysis was performed using an OncoScan CNV Assay Kit (Affymetrix, Santa Clara, CA, USA) according to the manufacturer’s recommendations. 2019-01-29 OEX015784 Lipidomics_positive Metabolomic N/A 2022-01-28 OEX015785 Lipidomics_negative Metabolomic N/A 2022-01-28 OEX015786 Untargeted polar metabolomics_positive Metabolomic N/A 2022-01-28 OEX015787 Untargeted polar metabolomics_negative Metabolomic N/A 2022-01-28 - Runs
-
17
Run ID Run Name Project Experiment Sample Data Date OER025887 Lib_FUSCCTNBC441_tumor OEP000155 OEX001582 OES014481 2 2019-01-29 OER025890 Lib_FUSCCTNBC441_normal OEP000155 OEX001582 OES014481 2 2019-01-29 OER026504 Lib_FUSCCTNBC441_tumor_WES OEP000155 OEX001583 OES014481 2 2019-01-29 OER026781 Lib_FUSCCTNBC441.peripheral-blood_WES OEP000155 OEX001583 OES014481 2 2019-01-29 OER027138 FUSCCTNBC441_tumor OEP000155 OEX001584 OES014481 2 2019-01-29 OER242785 FUSCCTNBC441_LIP_tumor_POS.wiff OEP000155 OEX015784 OES014481 1 2022-01-28 OER242912 FUSCCTNBC441_LIP_normal_POS.wiff OEP000155 OEX015784 OES014481 1 2022-01-28 OER243264 FUSCCTNBC441_LIP_tumor_NEG.wiff OEP000155 OEX015785 OES014481 1 2022-01-28 OER243391 FUSCCTNBC441_LIP_normal_NEG.wiff OEP000155 OEX015785 OES014481 1 2022-01-28 OER243743 FUSCCTNBC441_LIP_tumor_POS.wiff.scan OEP000155 OEX015784 OES014481 1 2022-01-28 OER243870 FUSCCTNBC441_LIP_normal_POS.wiff.scan OEP000155 OEX015784 OES014481 1 2022-01-28 OER244222 FUSCCTNBC441_LIP_tumor_NEG.wiff.scan OEP000155 OEX015785 OES014481 1 2022-01-28 OER244349 FUSCCTNBC441_LIP_normal_NEG.wiff.scan OEP000155 OEX015785 OES014481 1 2022-01-28 OER244703 FUSCCTNBC441_POL_tumor_POS.d.tar.gz OEP000155 OEX015786 OES014481 1 2022-01-29 OER244830 FUSCCTNBC441_POL_normal_POS.d.tar.gz OEP000155 OEX015786 OES014481 1 2022-01-29 OER245182 FUSCCTNBC441_POL_tumor_NEG.d.tar.gz OEP000155 OEX015787 OES014481 1 2022-01-29 OER245309 FUSCCTNBC441_POL_normal_NEG.d.tar.gz OEP000155 OEX015787 OES014481 1 2022-01-29
Author Information
- Create Date
- 2019-01-29
- Submission
- Ding Ma,Fudan University Shanghai Cancer Center