General Information
- Sample ID
- OES014528
- Sample Name
- FUSCCTNBC158
- Subject type
- Human
Sample information
- Organism
- Homo sapiens
- Tissue
- breast
- ATTRIBUTES
-
age_at_surgery 58 gender female dis_mol_type mRNA_subtype:IM,iCluster_subtype:iC6,SNF_Subtype:SC5 dis_phenotype Intrinsic_Subtype:Basal karyo_type CNA_Subtype:Chr12p13_amp - Projects
-
1
Project ID Project name Submitter Date OEP000155 Genomic and Transcriptomic Landscape of Triple-Negative Breast Cancers: Subtypes and Treatment Strategies. Ma, Ding 2018-08-10 - Experiments
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7
Experiment ID Experiment name Experiment type Experiment protocol Date OEX001582 RNAseq Transcriptomic RNA library preparation was performed as described in the Illumina TruSeq Stranded Total RNA LT sample preparation kit with Ribo-Zero Gold (Illumina Inc., San Diego, CA, USA). 2019-01-29 OEX001583 WES Genomic N/A 2019-01-29 OEX001584 OncoScan Array Microarray Genome-wide copy number analysis was performed using an OncoScan CNV Assay Kit (Affymetrix, Santa Clara, CA, USA) according to the manufacturer’s recommendations. 2019-01-29 OEX015784 Lipidomics_positive Metabolomic N/A 2022-01-28 OEX015785 Lipidomics_negative Metabolomic N/A 2022-01-28 OEX015786 Untargeted polar metabolomics_positive Metabolomic N/A 2022-01-28 OEX015787 Untargeted polar metabolomics_negative Metabolomic N/A 2022-01-28 - Runs
-
16
Run ID Run Name Project Experiment Sample Data Date OER025945 Lib_FUSCCTNBC158_tumor OEP000155 OEX001582 OES014528 2 2019-01-29 OER026340 Lib_FUSCCTNBC158_tumor_WES OEP000155 OEX001583 OES014528 2 2019-01-29 OER026617 Lib_FUSCCTNBC158.peripheral-blood_WES OEP000155 OEX001583 OES014528 2 2019-01-29 OER027079 FUSCCTNBC158_tumor OEP000155 OEX001584 OES014528 2 2019-01-29 OER242649 FUSCCTNBC158_LIP_tumor_POS.wiff OEP000155 OEX015784 OES014528 1 2022-01-28 OER242921 FUSCCTNBC158_LIP_normal_POS.wiff OEP000155 OEX015784 OES014528 1 2022-01-28 OER243128 FUSCCTNBC158_LIP_tumor_NEG.wiff OEP000155 OEX015785 OES014528 1 2022-01-28 OER243400 FUSCCTNBC158_LIP_normal_NEG.wiff OEP000155 OEX015785 OES014528 1 2022-01-28 OER243607 FUSCCTNBC158_LIP_tumor_POS.wiff.scan OEP000155 OEX015784 OES014528 1 2022-01-28 OER243879 FUSCCTNBC158_LIP_normal_POS.wiff.scan OEP000155 OEX015784 OES014528 1 2022-01-28 OER244086 FUSCCTNBC158_LIP_tumor_NEG.wiff.scan OEP000155 OEX015785 OES014528 1 2022-01-28 OER244358 FUSCCTNBC158_LIP_normal_NEG.wiff.scan OEP000155 OEX015785 OES014528 1 2022-01-28 OER244567 FUSCCTNBC158_POL_tumor_POS.d.tar.gz OEP000155 OEX015786 OES014528 1 2022-01-29 OER244839 FUSCCTNBC158_POL_normal_POS.d.tar.gz OEP000155 OEX015786 OES014528 1 2022-01-29 OER245046 FUSCCTNBC158_POL_tumor_NEG.d.tar.gz OEP000155 OEX015787 OES014528 1 2022-01-29 OER245318 FUSCCTNBC158_POL_normal_NEG.d.tar.gz OEP000155 OEX015787 OES014528 1 2022-01-29
Author Information
- Create Date
- 2019-01-29
- Submission
- Ding Ma,Fudan University Shanghai Cancer Center