General Information
- Sample ID
- OES014697
- Sample Name
- FUSCCTNBC438
- Subject type
- Human
Sample information
- Organism
- Homo sapiens
- Tissue
- breast
- ATTRIBUTES
-
age_at_surgery 54 gender female dis_mol_type mRNA_subtype:BLIS,iCluster_subtype:iC1,SNF_Subtype:SC1 dis_phenotype Intrinsic_Subtype:Basal karyo_type CNA_Subtype:Chr9p23_amp - Projects
-
1
Project ID Project name Submitter Date OEP000155 Genomic and Transcriptomic Landscape of Triple-Negative Breast Cancers: Subtypes and Treatment Strategies. Ma, Ding 2018-08-10 - Experiments
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7
Experiment ID Experiment name Experiment type Experiment protocol Date OEX001582 RNAseq Transcriptomic RNA library preparation was performed as described in the Illumina TruSeq Stranded Total RNA LT sample preparation kit with Ribo-Zero Gold (Illumina Inc., San Diego, CA, USA). 2019-01-29 OEX001583 WES Genomic N/A 2019-01-29 OEX001584 OncoScan Array Microarray Genome-wide copy number analysis was performed using an OncoScan CNV Assay Kit (Affymetrix, Santa Clara, CA, USA) according to the manufacturer’s recommendations. 2019-01-29 OEX015784 Lipidomics_positive Metabolomic N/A 2022-01-28 OEX015785 Lipidomics_negative Metabolomic N/A 2022-01-28 OEX015786 Untargeted polar metabolomics_positive Metabolomic N/A 2022-01-28 OEX015787 Untargeted polar metabolomics_negative Metabolomic N/A 2022-01-28 - Runs
-
16
Run ID Run Name Project Experiment Sample Data Date OER026123 Lib_FUSCCTNBC438_tumor OEP000155 OEX001582 OES014697 2 2019-01-29 OER026502 Lib_FUSCCTNBC438_tumor_WES OEP000155 OEX001583 OES014697 2 2019-01-29 OER026779 Lib_FUSCCTNBC438.peripheral-blood_WES OEP000155 OEX001583 OES014697 2 2019-01-29 OER026959 FUSCCTNBC438_tumor OEP000155 OEX001584 OES014697 2 2019-01-29 OER242784 FUSCCTNBC438_LIP_tumor_POS.wiff OEP000155 OEX015784 OES014697 1 2022-01-28 OER242894 FUSCCTNBC438_LIP_normal_POS.wiff OEP000155 OEX015784 OES014697 1 2022-01-28 OER243263 FUSCCTNBC438_LIP_tumor_NEG.wiff OEP000155 OEX015785 OES014697 1 2022-01-28 OER243373 FUSCCTNBC438_LIP_normal_NEG.wiff OEP000155 OEX015785 OES014697 1 2022-01-28 OER243742 FUSCCTNBC438_LIP_tumor_POS.wiff.scan OEP000155 OEX015784 OES014697 1 2022-01-28 OER243852 FUSCCTNBC438_LIP_normal_POS.wiff.scan OEP000155 OEX015784 OES014697 1 2022-01-28 OER244221 FUSCCTNBC438_LIP_tumor_NEG.wiff.scan OEP000155 OEX015785 OES014697 1 2022-01-28 OER244331 FUSCCTNBC438_LIP_normal_NEG.wiff.scan OEP000155 OEX015785 OES014697 1 2022-01-28 OER244702 FUSCCTNBC438_POL_tumor_POS.d.tar.gz OEP000155 OEX015786 OES014697 1 2022-01-29 OER244812 FUSCCTNBC438_POL_normal_POS.d.tar.gz OEP000155 OEX015786 OES014697 1 2022-01-29 OER245181 FUSCCTNBC438_POL_tumor_NEG.d.tar.gz OEP000155 OEX015787 OES014697 1 2022-01-29 OER245291 FUSCCTNBC438_POL_normal_NEG.d.tar.gz OEP000155 OEX015787 OES014697 1 2022-01-29
Author Information
- Create Date
- 2019-01-29
- Submission
- Ding Ma,Fudan University Shanghai Cancer Center