National Omics Data Encyclopedia

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General Information

Sample information

Organism

Homo sapiens

Tissue

breast

ATTRIBUTES

age_at_surgery	57	gender	female
dis_mol_type	mRNA_subtype:BLIS,iCluster_subtype:NA,SNF_Subtype:NA	dis_phenotype	Intrinsic_Subtype:Basal
karyo_type	CNA_Subtype:NA

Projects

1

Project ID	Project name	Submitter	Date
OEP000155	Genomic and Transcriptomic Landscape of Triple-Negative Breast Cancers: Subtypes and Treatment Strategies.	Ma, Ding	2018-08-10

Experiments

5

Experiment ID	Experiment name	Experiment type	Experiment protocol	Date
OEX001582	RNAseq	Transcriptomic	RNA library preparation was performed as described in the Illumina TruSeq Stranded Total RNA LT sample preparation kit with Ribo-Zero Gold (Illumina Inc., San Diego, CA, USA).	2019-01-29
OEX015784	Lipidomics_positive	Metabolomic	N/A	2022-01-28
OEX015785	Lipidomics_negative	Metabolomic	N/A	2022-01-28
OEX015786	Untargeted polar metabolomics_positive	Metabolomic	N/A	2022-01-28
OEX015787	Untargeted polar metabolomics_negative	Metabolomic	N/A	2022-01-28

Runs

13

Run ID	Run Name	Project	Experiment	Sample	Data	Date
OER026163	Lib_FUSCCTNBC490_tumor	OEP000155	OEX001582	OES014737	2	2019-01-29
OER242791	FUSCCTNBC490_LIP_tumor_POS.wiff	OEP000155	OEX015784	OES014737	1	2022-01-28
OER242904	FUSCCTNBC490_LIP_normal_POS.wiff	OEP000155	OEX015784	OES014737	1	2022-01-28
OER243270	FUSCCTNBC490_LIP_tumor_NEG.wiff	OEP000155	OEX015785	OES014737	1	2022-01-28
OER243383	FUSCCTNBC490_LIP_normal_NEG.wiff	OEP000155	OEX015785	OES014737	1	2022-01-28
OER243749	FUSCCTNBC490_LIP_tumor_POS.wiff.scan	OEP000155	OEX015784	OES014737	1	2022-01-28
OER243862	FUSCCTNBC490_LIP_normal_POS.wiff.scan	OEP000155	OEX015784	OES014737	1	2022-01-28
OER244228	FUSCCTNBC490_LIP_tumor_NEG.wiff.scan	OEP000155	OEX015785	OES014737	1	2022-01-28
OER244341	FUSCCTNBC490_LIP_normal_NEG.wiff.scan	OEP000155	OEX015785	OES014737	1	2022-01-28
OER244709	FUSCCTNBC490_POL_tumor_POS.d.tar.gz	OEP000155	OEX015786	OES014737	1	2022-01-29
OER244822	FUSCCTNBC490_POL_normal_POS.d.tar.gz	OEP000155	OEX015786	OES014737	1	2022-01-29
OER245188	FUSCCTNBC490_POL_tumor_NEG.d.tar.gz	OEP000155	OEX015787	OES014737	1	2022-01-29
OER245301	FUSCCTNBC490_POL_normal_NEG.d.tar.gz	OEP000155	OEX015787	OES014737	1	2022-01-29

Author Information