General Information
- Sample ID
- OES014746
- Sample Name
- FUSCCTNBC023
- Subject type
- Human
Sample information
- Organism
- Homo sapiens
- Tissue
- breast
- Collect date
- 2013-08-27
- ATTRIBUTES
-
age_at_surgery 54y gender female dis_mol_type mRNA_subtype:IM,iCluster_subtype:iC1,SNF_Subtype:SC3 dis_phenotype Intrinsic_Subtype:Basal karyo_type CNA_Subtype:Chr9p23_amp - Projects
-
1
Project ID Project name Submitter Date OEP000155 Genomic and Transcriptomic Landscape of Triple-Negative Breast Cancers: Subtypes and Treatment Strategies. Ma, Ding 2018-08-10 - Experiments
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7
Experiment ID Experiment name Experiment type Experiment protocol Date OEX001582 RNAseq Transcriptomic RNA library preparation was performed as described in the Illumina TruSeq Stranded Total RNA LT sample preparation kit with Ribo-Zero Gold (Illumina Inc., San Diego, CA, USA). 2019-01-29 OEX001583 WES Genomic N/A 2019-01-29 OEX001584 OncoScan Array Microarray Genome-wide copy number analysis was performed using an OncoScan CNV Assay Kit (Affymetrix, Santa Clara, CA, USA) according to the manufacturer’s recommendations. 2019-01-29 OEX015784 Lipidomics_positive Metabolomic N/A 2022-01-28 OEX015785 Lipidomics_negative Metabolomic N/A 2022-01-28 OEX015786 Untargeted polar metabolomics_positive Metabolomic N/A 2022-01-28 OEX015787 Untargeted polar metabolomics_negative Metabolomic N/A 2022-01-28 - Runs
-
17
Run ID Run Name Project Experiment Sample Data Date OER026175 Lib_FUSCCTNBC023_normal OEP000155 OEX001582 OES014746 2 2019-01-29 OER026176 Lib_FUSCCTNBC023_tumor OEP000155 OEX001582 OES014746 2 2019-01-29 OER026266 Lib_FUSCCTNBC023_tumor_WES OEP000155 OEX001583 OES014746 2 2019-01-29 OER026541 Lib_FUSCCTNBC023.peripheral-blood_WES OEP000155 OEX001583 OES014746 2 2019-01-29 OER027065 FUSCCTNBC023_tumor OEP000155 OEX001584 OES014746 2 2019-01-29 OER242630 FUSCCTNBC023_LIP_tumor_POS.wiff OEP000155 OEX015784 OES014746 1 2022-01-28 OER242913 FUSCCTNBC023_LIP_normal_POS.wiff OEP000155 OEX015784 OES014746 1 2022-01-28 OER243109 FUSCCTNBC023_LIP_tumor_NEG.wiff OEP000155 OEX015785 OES014746 1 2022-01-28 OER243392 FUSCCTNBC023_LIP_normal_NEG.wiff OEP000155 OEX015785 OES014746 1 2022-01-28 OER243588 FUSCCTNBC023_LIP_tumor_POS.wiff.scan OEP000155 OEX015784 OES014746 1 2022-01-28 OER243871 FUSCCTNBC023_LIP_normal_POS.wiff.scan OEP000155 OEX015784 OES014746 1 2022-01-28 OER244067 FUSCCTNBC023_LIP_tumor_NEG.wiff.scan OEP000155 OEX015785 OES014746 1 2022-01-28 OER244350 FUSCCTNBC023_LIP_normal_NEG.wiff.scan OEP000155 OEX015785 OES014746 1 2022-01-28 OER244548 FUSCCTNBC023_POL_tumor_POS.d.tar.gz OEP000155 OEX015786 OES014746 1 2022-01-29 OER244831 FUSCCTNBC023_POL_normal_POS.d.tar.gz OEP000155 OEX015786 OES014746 1 2022-01-29 OER245027 FUSCCTNBC023_POL_tumor_NEG.d.tar.gz OEP000155 OEX015787 OES014746 1 2022-01-29 OER245310 FUSCCTNBC023_POL_normal_NEG.d.tar.gz OEP000155 OEX015787 OES014746 1 2022-01-29
Author Information
- Create Date
- 2019-01-29
- Submission
- Ding Ma,Fudan University Shanghai Cancer Center