General Information
- Sample ID
- OES014777
- Sample Name
- FUSCCTNBC328
- Subject type
- Human
Sample information
- Organism
- Homo sapiens
- Tissue
- breast
- ATTRIBUTES
-
age_at_surgery 47 gender female dis_mol_type mRNA_subtype:MES,iCluster_subtype:iC10,SNF_Subtype:NA dis_phenotype Intrinsic_Subtype:Other karyo_type CNA_Subtype:Low_CIN - Projects
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1
Project ID Project name Submitter Date OEP000155 Genomic and Transcriptomic Landscape of Triple-Negative Breast Cancers: Subtypes and Treatment Strategies. Ma, Ding 2018-08-10 - Experiments
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7
Experiment ID Experiment name Experiment type Experiment protocol Date OEX001582 RNAseq Transcriptomic RNA library preparation was performed as described in the Illumina TruSeq Stranded Total RNA LT sample preparation kit with Ribo-Zero Gold (Illumina Inc., San Diego, CA, USA). 2019-01-29 OEX001583 WES Genomic N/A 2019-01-29 OEX001584 OncoScan Array Microarray Genome-wide copy number analysis was performed using an OncoScan CNV Assay Kit (Affymetrix, Santa Clara, CA, USA) according to the manufacturer’s recommendations. 2019-01-29 OEX015784 Lipidomics_positive Metabolomic N/A 2022-01-28 OEX015785 Lipidomics_negative Metabolomic N/A 2022-01-28 OEX015786 Untargeted polar metabolomics_positive Metabolomic N/A 2022-01-28 OEX015787 Untargeted polar metabolomics_negative Metabolomic N/A 2022-01-28 - Runs
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11
Run ID Run Name Project Experiment Sample Data Date OER026238 FUSCCTNBC328_normal_RNAseq OEP000155 OEX001582 OES014777 2 2019-01-29 OER026442 Lib_FUSCCTNBC328_tumor_WES OEP000155 OEX001583 OES014777 2 2019-01-29 OER026719 Lib_FUSCCTNBC328.peripheral-blood_WES OEP000155 OEX001583 OES014777 2 2019-01-29 OER026826 FUSCCTNBC328_tumor OEP000155 OEX001584 OES014777 2 2019-01-29 OER027227 Lib_FUSCCTNBC328_tumor OEP000155 OEX001582 OES014777 2 2019-01-30 OER242553 FUSCCTNBC328_LIP_tumor_POS.wiff OEP000155 OEX015784 OES014777 1 2022-01-28 OER243032 FUSCCTNBC328_LIP_tumor_NEG.wiff OEP000155 OEX015785 OES014777 1 2022-01-28 OER243511 FUSCCTNBC328_LIP_tumor_POS.wiff.scan OEP000155 OEX015784 OES014777 1 2022-01-28 OER243990 FUSCCTNBC328_LIP_tumor_NEG.wiff.scan OEP000155 OEX015785 OES014777 1 2022-01-28 OER244471 FUSCCTNBC328_POL_tumor_POS.d.tar.gz OEP000155 OEX015786 OES014777 1 2022-01-29 OER244950 FUSCCTNBC328_POL_tumor_NEG.d.tar.gz OEP000155 OEX015787 OES014777 1 2022-01-29
Author Information
- Create Date
- 2019-01-29
- Submission
- Ding Ma,Fudan University Shanghai Cancer Center