National Omics Data Encyclopedia

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General Information

Sample information

Organism

Homo sapiens

Tissue

breast

ATTRIBUTES

age_at_surgery	52	gender	female
dis_mol_type	mRNA_subtype:NA,iCluster_subtype:NA,SNF_Subtype:NA	dis_phenotype	Intrinsic_Subtype:NA
karyo_type	CNA_Subtype:Chr12p13_amp

Projects

1

Project ID	Project name	Submitter	Date
OEP000155	Genomic and Transcriptomic Landscape of Triple-Negative Breast Cancers: Subtypes and Treatment Strategies.	Ma, Ding	2018-08-10

Experiments

6

Experiment ID	Experiment name	Experiment type	Experiment protocol	Date
OEX001583	WES	Genomic	N/A	2019-01-29
OEX001584	OncoScan Array	Microarray	Genome-wide copy number analysis was performed using an OncoScan CNV Assay Kit (Affymetrix, Santa Clara, CA, USA) according to the manufacturer’s recommendations.	2019-01-29
OEX015784	Lipidomics_positive	Metabolomic	N/A	2022-01-28
OEX015785	Lipidomics_negative	Metabolomic	N/A	2022-01-28
OEX015786	Untargeted polar metabolomics_positive	Metabolomic	N/A	2022-01-28
OEX015787	Untargeted polar metabolomics_negative	Metabolomic	N/A	2022-01-28

Runs

15

Run ID	Run Name	Project	Experiment	Sample	Data	Date
OER026360	Lib_FUSCCTNBC190_tumor_WES	OEP000155	OEX001583	OES014791	2	2019-01-29
OER026637	Lib_FUSCCTNBC190.peripheral-blood_WES	OEP000155	OEX001583	OES014791	2	2019-01-29
OER026966	FUSCCTNBC190_tumor	OEP000155	OEX001584	OES014791	2	2019-01-29
OER242488	FUSCCTNBC190_LIP_tumor_POS.wiff	OEP000155	OEX015784	OES014791	1	2022-01-28
OER242852	FUSCCTNBC190_LIP_normal_POS.wiff	OEP000155	OEX015784	OES014791	1	2022-01-28
OER242967	FUSCCTNBC190_LIP_tumor_NEG.wiff	OEP000155	OEX015785	OES014791	1	2022-01-28
OER243331	FUSCCTNBC190_LIP_normal_NEG.wiff	OEP000155	OEX015785	OES014791	1	2022-01-28
OER243446	FUSCCTNBC190_LIP_tumor_POS.wiff.scan	OEP000155	OEX015784	OES014791	1	2022-01-28
OER243810	FUSCCTNBC190_LIP_normal_POS.wiff.scan	OEP000155	OEX015784	OES014791	1	2022-01-28
OER243925	FUSCCTNBC190_LIP_tumor_NEG.wiff.scan	OEP000155	OEX015785	OES014791	1	2022-01-28
OER244289	FUSCCTNBC190_LIP_normal_NEG.wiff.scan	OEP000155	OEX015785	OES014791	1	2022-01-28
OER244406	FUSCCTNBC190_POL_tumor_POS.d.tar.gz	OEP000155	OEX015786	OES014791	1	2022-01-29
OER244770	FUSCCTNBC190_POL_normal_POS.d.tar.gz	OEP000155	OEX015786	OES014791	1	2022-01-29
OER244885	FUSCCTNBC190_POL_tumor_NEG.d.tar.gz	OEP000155	OEX015787	OES014791	1	2022-01-29
OER245249	FUSCCTNBC190_POL_normal_NEG.d.tar.gz	OEP000155	OEX015787	OES014791	1	2022-01-29

Author Information