General Information
- Sample ID
- OES338107
- Sample Name
- DY37-II-Dive119-preserved in 70 MPa HP vessel incubated under 70 MPa
- Subject type
- Environment non-host
Sample information
- Organism
- marine sediment metagenome
- ATTRIBUTES
-
env_biome marine biome (ENVO:00000447) biome root:Environmental:Aquatic:Marine:Sediment env_package sediment - Projects
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3
Project ID Project name Submitter Date OEP004015 16S rRNA gene diversity during DOES incubation under different HHP Zhang, Yu 2023-03-13 OEP004042 Metagenomics during DOES incubation under different HHP Zhang, Yu 2023-03-15 OEP004045 Metatranscriptomics during DOES incubation under different HHP Zhang, Yu 2023-03-15 - Experiments
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4
Experiment ID Experiment name Experiment type Experiment protocol Date OEX022552 16S rRNA genes were amplified using universal archaeal primers Metagenomic N/A 2023-03-13 OEX022859 Metagenomic sequencing of DOES incubation samples Metagenomic The extracted microbial DNA was processed to construct metagenome shotgun sequencing libraries following the standard Illumina TruSeq DNA Sample Preparation Guide. Each library was sequenced by Illumina NovaSeq 6000 platform (Illumina, USA) with PE150 strategy at Shanghai Personal Biotechnology (Shanghai, China). 2023-03-15 OEX022922 Metatranscriptomics sequencing of DOES incubation samples Metatranscriptomic To ensure DNA removal, the RNA extracts are treated with TURBO DNase (Invitrogen, Waltham, MA, USA) as directed by the manufacturer. 2023-03-15 OEX025544 16S rRNA genes were amplified using universal bacterial primers Metagenomic N/A 2023-12-05 - Runs
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4
Run ID Run Name Project Experiment Sample Data Date OER444801 DOES_arc_70 OEP004015 OEX022552 OES338107 2 2023-12-05 OER444807 DOES_bac_70 OEP004015 OEX025544 OES338107 2 2023-12-05 OER444813 DOES_MG_70 OEP004042 OEX022859 OES338107 2 2023-12-05 OER444818 DOES_MT_70 OEP004045 OEX022922 OES338107 2 2023-12-05
Author Information
- Create Date
- 2023-12-05
- Last Modified
- 2023-12-05
- Submission
- Yu Zhang,Shanghai Jiaotong University