TransCirc

CircID: TC-hsa-C16orf62_0028

CircRNA information

Taxonomy:

Homo sapiens

Genome Version:

hg38

Location:

chr16:19591816~19601723

Gene:

C16orf62

Gene type:

protein_coding

Strand:

exons:

ORFS:

Xref:

circAtlas: hsa-C16orf62_0117

Evidences

Ribosome/polysome profiling	0.0	Evidence score: 1.575253 MS Q-Value:
ORF	1.0
IRES sequence	0.01886
Translation initiation site	0.0
SeqComp	0.55639
m6A sites	0.0
MS evidence	0.0

Other evidences Upload

File	Author	Date

Structure

IRES

m6A

TIS

circRNA sequence

TGTTATTCAGTTCTACCCAAGCAAATTTGTCCTTATCACCGACATACTTGATACATTTGGAAAGCTCGTGTACGAGCGCATCTTTTCCATGTGTGTGGATAGCCGCAGCGTCTTACCAG

Exons

exon1:19591816~19591874
exon2:19601664~19601723

IRES sequence

19591856~19591861

circRNA specific ORFs

Attribute

ORF struct

circRNA sequence

Amino acid sequence

MS evidence

Start: 89
Stop: 51
Length: 201
Translation cycles: 2

ATGTGTGTGGATAGCCGCAGCGTCTTACCAGTGTTATTCAGTTCTACCCAAGCAAATTTGTCCTTATCACCGACATACTTGATACATTTGGAAAGCTCGTGTACGAGCGCATCTTTTCCATGTGTGTGGATAGCCGCAGCGTCTTACCAGTGTTATTCAGTTCTACCCAAGCAAATTTGTCCTTATCACCGACATACTTGA

MCVDSRSVLPVLFSSTQANLSLSPTYLIHLESSCTSASFPCVWIAAASYQCYSVLPKQICPYHRHT*

Start: 93
Stop: 51
Length: 78
Translation cycles: 1

GTGTGGATAGCCGCAGCGTCTTACCAGTGTTATTCAGTTCTACCCAAGCAAATTTGTCCTTATCACCGACATACTTGA