TransCirc

CircID: TC-hsa-EIF5_0001

CircRNA information

Taxonomy:

Homo sapiens

Genome Version:

hg38

Location:

chr14:103334389~103335544

Gene:

EIF5

Gene type:

protein_coding

Strand:

exons:

ORFS:

Xref:

circAtlas: hsa-EIF5_0023

Evidences

Ribosome/polysome profiling	0.0	Evidence score: 2.017332 MS Q-Value:
ORF	1.0
IRES sequence	0.01733
Translation initiation site	1.0
SeqComp	0.0
m6A sites	0.0
MS evidence	0.0

Other evidences Upload

File	Author	Date

Structure

IRES

m6A

TIS

circRNA sequence

GTCGCCCAGCTCCGGCGCTGACGGGTGTGGACCGCGGACGTCGCTGGGACAGCCCCTCCCCGCTGCTCGGCGGCGGCACCTGGCCCGGCCGCTCCTCGCTGCGCTTCGCCTCCGCCTCCTCGGACTCGGACTCGGGTTTATATCGCGCCTCACTTCATCCCAGTCCCGGGCGAGCAGCGTTGGGTTTATGTCTTTATTTGACGAAAACG

Exons

exon1:103334389~103334597

IRES sequence

103334526~103334531

Translation initiation site

103334576~103334578

circRNA specific ORFs

Attribute

ORF struct

circRNA sequence

Amino acid sequence

MS evidence

Start: 188
Stop: 21
Length: 252
Translation cycles: 2

ATGTCTTTATTTGACGAAAACGGTCGCCCAGCTCCGGCGCTGACGGGTGTGGACCGCGGACGTCGCTGGGACAGCCCCTCCCCGCTGCTCGGCGGCGGCACCTGGCCCGGCCGCTCCTCGCTGCGCTTCGCCTCCGCCTCCTCGGACTCGGACTCGGGTTTATATCGCGCCTCACTTCATCCCAGTCCCGGGCGAGCAGCGTTGGGTTTATGTCTTTATTTGACGAAAACGGTCGCCCAGCTCCGGCGCTGA

MSLFDENGRPAPALTGVDRGRRWDSPSPLLGGGTWPGRSSLRFASASSDSDSGLYRASLHPSPGRAALGLCLYLTKTVAQLRR*

Start: 18
Stop: 21
Length: 213
Translation cycles: 1

CTGACGGGTGTGGACCGCGGACGTCGCTGGGACAGCCCCTCCCCGCTGCTCGGCGGCGGCACCTGGCCCGGCCGCTCCTCGCTGCGCTTCGCCTCCGCCTCCTCGGACTCGGACTCGGGTTTATATCGCGCCTCACTTCATCCCAGTCCCGGGCGAGCAGCGTTGGGTTTATGTCTTTATTTGACGAAAACGGTCGCCCAGCTCCGGCGCTGA

LTGVDRGRRWDSPSPLLGGGTWPGRSSLRFASASSDSDSGLYRASLHPSPGRAALGLCLYLTKTVAQLRR*