TransCirc

CircID: TC-hsa-INTS8_0075

CircRNA information

Taxonomy:

Homo sapiens

Genome Version:

hg38

Location:

chr8:94838463~94841591

Gene:

INTS8

Gene type:

protein_coding

Strand:

exons:

ORFS:

Xref:

circAtlas: hsa-INTS8_0105
circBase: hsa_circ_0084948
circRNADb: hsa_circ_18777
deepbase2: hsa-circRNA7506-16
circpedia2: HSA_CIRCpedia_61866

Evidences

Ribosome/polysome profiling	0.0	Evidence score: 1.786225 MS Q-Value:
ORF	1.0
IRES sequence	0.22985
Translation initiation site	0.0
SeqComp	0.55638
m6A sites	0.0
MS evidence	0.0

Other evidences Upload

File	Author	Date

Structure

IRES

m6A

TIS

circRNA sequence

ATAGGTTCATTATCTCTTCATTGTACCATAGATGAGAAGCGGTTAGCTGGCTATTGTCAAGCATGTGATGTTCTTGTACCTTCTTCTGATAGTACATCTCAACAGTTGACTCCATATAGTCAAGTCCATATTTGTTTGAGATCTGGCAACTATCAGGAGGTAATACAGATTTTCATTGAAGACAACTTAACCTTGAGTTTACCTGTCCAGTTCCGACAGTCAGTCCTAAGAGAACTCTTTAAGAAAGCTCAACAGGG

Exons

exon1:94838463~94838618
exon2:94841491~94841591

IRES sequence

94838519~94838524
94838575~94838581
94841496~94841501
94841574~94841579

circRNA specific ORFs

Attribute

ORF struct

circRNA sequence

Amino acid sequence

MS evidence

Start: 106
Stop: 4
Length: 156
Translation cycles: 1

TTGACTCCATATAGTCAAGTCCATATTTGTTTGAGATCTGGCAACTATCAGGAGGTAATACAGATTTTCATTGAAGACAACTTAACCTTGAGTTTACCTGTCCAGTTCCGACAGTCAGTCCTAAGAGAACTCTTTAAGAAAGCTCAACAGGGATAG

LTPYSQVHICLRSGNYQEVIQIFIEDNLTLSLPVQFRQSVLRELFKKAQQG*