TransCirc

CircID: TC-hsa-KIF1C_0002

CircRNA information

Taxonomy:

Homo sapiens

Genome Version:

hg38

Location:

chr17:4999890~5000253

Gene:

KIF1C

Gene type:

protein_coding

Strand:

exons:

ORFS:

Xref:

circAtlas: hsa-KIF1C_0033

Evidences

Ribosome/polysome profiling	0.0	Evidence score: 2.897237 MS Q-Value:
ORF	1.0
IRES sequence	0.01763
Translation initiation site	1.0
SeqComp	0.87961
m6A sites	0.0
MS evidence	0.0

Other evidences Upload

File	Author	Date

Structure

IRES

m6A

TIS

circRNA sequence

GAGTAGGATGGGGCTCCCCCTACGAGGGCCGGTGGCAGCCAGAACTGATACAGCCCCCCTGGTCTGGGGCCAGGACGCCAGCTGAGGAGGGCAGGAGTGTCTGGAGCTATGGCTG

Exons

exon1:4999890~4999970
exon2:5000220~5000253

IRES sequence

4999932~4999937

Translation initiation site

5000247~5000249

circRNA specific ORFs

Attribute

ORF struct

circRNA sequence

Amino acid sequence

MS evidence

Start: 109
Stop: 85
Length: 207
Translation cycles: 2

ATGGCTGGAGTAGGATGGGGCTCCCCCTACGAGGGCCGGTGGCAGCCAGAACTGATACAGCCCCCCTGGTCTGGGGCCAGGACGCCAGCTGAGGAGGGCAGGAGTGTCTGGAGCTATGGCTGGAGTAGGATGGGGCTCCCCCTACGAGGGCCGGTGGCAGCCAGAACTGATACAGCCCCCCTGGTCTGGGGCCAGGACGCCAGCTGA

MAGVGWGSPYEGRWQPELIQPPWSGARTPAEEGRSVWSYGWSRMGLPLRGPVAARTDTAPLVWGQDAS*

Start: 45
Stop: 85
Length: 156
Translation cycles: 1

CTGATACAGCCCCCCTGGTCTGGGGCCAGGACGCCAGCTGAGGAGGGCAGGAGTGTCTGGAGCTATGGCTGGAGTAGGATGGGGCTCCCCCTACGAGGGCCGGTGGCAGCCAGAACTGATACAGCCCCCCTGGTCTGGGGCCAGGACGCCAGCTGA

LIQPPWSGARTPAEEGRSVWSYGWSRMGLPLRGPVAARTDTAPLVWGQDAS*