CircID: TC-hsa-PANK4_0011

CircRNA information
Taxonomy:
Genome Version:
hg38 
Location:
chr1:2520723~2521800 
Gene:
Gene type:
protein_coding
Strand:
-
exons:
ORFS:
Evidences
Ribosome/polysome profiling 0.0
Evidence score: 1.770546
MS Q-Value:
ORF 1.0
IRES sequence 0.20977
Translation initiation site 0.0
SeqComp 0.56078
m6A sites 0.0
MS evidence 0.0
Other evidences Upload
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Structure
IRES
m6A
TIS
circRNA sequence
GCGGGTCGTTAACCAAGCTGGCCTACTATTCAACGGTACAGCACAAAGTCGCCAAGGTGCGGTCTTTCGACCACTCCGGAAAGGACACAGAACGTGAACATGAGCCGCCCTATGAGATTTCAGTTCAAGAAGAGATCACTGCTCGACTGCACTTCATTAAGTTTGAGAATACCTACATCGAAGCCTGCCTGGACTTCATCAAAGACCATCTCGTCAACACAGAGACCAAGGTCATCCAGGCGACCGGGGGCGGGGCCTACAAGTTCAAAGACCTCATCGAAGAGAAGCTGCGGCTGAAAGTCGACAAGGAGGACGTGATGACGTGCCTGATTAAGGGGTGCAACTTCGTGCTCAAGAACATCCCCCATGAGGCCTTCGTGTACCAGAAGGATTCCGACCCTGAGTTCCGGTTCCAGACCAACCACCCCCACATTTTCCCCTATCTTCTTGTCAATATCGGCTCTGGAGTCTCCATCGTGAAG
Exons
  • exon1:2521800~2521718
  • exon2:2521315~2521101
  • exon3:2520906~2520723
IRES sequence
  • 2521272~2521266
  • 2521198~2521193
  • 2521132~2521127
  • 2520752~2520747
circRNA specific ORFs
Attribute
ORF struct
circRNA sequence
Amino acid sequence
MS evidence
  • Start: 318
  • Stop: 12
  • Length: 177
  • Translation cycles: 1
ATGACGTGCCTGATTAAGGGGTGCAACTTCGTGCTCAAGAACATCCCCCATGAGGCCTTCGTGTACCAGAAGGATTCCGACCCTGAGTTCCGGTTCCAGACCAACCACCCCCACATTTTCCCCTATCTTCTTGTCAATATCGGCTCTGGAGTCTCCATCGTGAAGGCGGGTCGTTAA
MTCLIKGCNFVLKNIPHEAFVYQKDSDPEFRFQTNHPHIFPYLLVNIGSGVSIVKAGR*