CircRNA information
Taxonomy:
Genome Version:
hg38
Location:
chr2:158662897~158676867
Gene:
Gene type:
protein_coding
Strand:
+
exons:
ORFS:
Evidences
Ribosome/polysome profiling
|
0.0 |
Evidence score: 3.138878
MS Q-Value:
|
ORF
|
1.0 |
IRES sequence
|
0.38472 |
Translation initiation site
|
0.0 |
SeqComp
|
0.75416 |
m6A sites
|
1.0 |
MS evidence
|
0.0 |
circRNA sequence
ACGGTGGAGAACTGCGTGTGCACCCTGAGGAACCTGTCCTATCGGCTGGAGCTGGAGGTGCCCCAGGCCCGGTTACTGGGACTGAACGAATTGGATGACTTACTAGGAAAAGAGTCTCCCAGCAAAGACTCTGAGCCAAGTTGCTGGGGGAAGAAGAAGAAAAAGAAAAAGAGGACTCCGCAAGAAGATCAATGGGATGGAGTTGGTCCTATCCCAGGACTGTCGAAGTCCCCCAAAGGGGTTGAGATGCTGTGGCACCCATCGGTGGTAAAACCATATCTGACTCTTCTAGCAGAAAGTTCCAACCCAGCCACCTTGGAAGGCTCTGCAGGGTCTCTCCAGAACCTCTCTGCTGGCAACTGGAAGTTTGCAGCATATATCCGGGCGGCCGTCCGAAAAGAAAAGGGGCTCCCCATCCTTGTGGAGCTTCTGAGAATGGATAACGATAGAGTTGTTTCTTCCGTGGCAACAGCCTTGAGGAATATGGCACTAGATGTTCGCAACAAGGAGCTCATAGGCAAATACGCCATGCGAGACCTGGTCAACCGGCTCCCCGGCGGCAATGGCCCCAGTGTCTTGTCTGATGAGACCATGGCAGCCATCTGCTGTGCTCTGCACGAGGTCACCAGCAAAAACATGGAGAACGCAAAAGCCCTGGCCGACTCAGGAGGCATAGAGAAGCTGGTGAACATAACCAAAGGCAGGGGCGACAGATCATCTCTGAAAGTGGTGAAGGCAGCAGCCCAGGTCTTGAATACATTATGGCAATATCGGGACCTCCGGAGCATTTATAAAAAGGATGGGTGGAATCAGAACCATTTTATTACACCTGTGTCGACATTGGAGCGAGACCGATTCAAATCACATCCTTCCTTGTCTACCACCAACCAACAGATGTCACCCATCATTCAGTCAG
Exons
- exon1:158662897~158663088
- exon2:158663272~158663445
- exon3:158666413~158666563
- exon4:158669720~158669915
- exon5:158673677~158673761
- exon6:158673883~158674000
IRES sequence
- 158663004~158663009
- 158663020~158663025
- 158663046~158663062
- 158663063~158663068
- 158663078~158663084
- 158663355~158663360
- 158666420~158666426
- 158666442~158666447
- 158669722~158669727
- 158669832~158669840
- 158669890~158669896
- 158673715~158673722
- 158673730~158673735
- 158673752~158673760
circRNA specific ORFs
Attribute
ORF struct
circRNA sequence
Amino acid sequence
MS evidence
- Start: 247
- Stop: 98
- Length: 768
- Translation cycles: 1
ATGCTGTGGCACCCATCGGTGGTAAAACCATATCTGACTCTTCTAGCAGAAAGTTCCAACCCAGCCACCTTGGAAGGCTCTGCAGGGTCTCTCCAGAACCTCTCTGCTGGCAACTGGAAGTTTGCAGCATATATCCGGGCGGCCGTCCGAAAAGAAAAGGGGCTCCCCATCCTTGTGGAGCTTCTGAGAATGGATAACGATAGAGTTGTTTCTTCCGTGGCAACAGCCTTGAGGAATATGGCACTAGATGTTCGCAACAAGGAGCTCATAGGCAAATACGCCATGCGAGACCTGGTCAACCGGCTCCCCGGCGGCAATGGCCCCAGTGTCTTGTCTGATGAGACCATGGCAGCCATCTGCTGTGCTCTGCACGAGGTCACCAGCAAAAACATGGAGAACGCAAAAGCCCTGGCCGACTCAGGAGGCATAGAGAAGCTGGTGAACATAACCAAAGGCAGGGGCGACAGATCATCTCTGAAAGTGGTGAAGGCAGCAGCCCAGGTCTTGAATACATTATGGCAATATCGGGACCTCCGGAGCATTTATAAAAAGGATGGGTGGAATCAGAACCATTTTATTACACCTGTGTCGACATTGGAGCGAGACCGATTCAAATCACATCCTTCCTTGTCTACCACCAACCAACAGATGTCACCCATCATTCAGTCAGACGGTGGAGAACTGCGTGTGCACCCTGAGGAACCTGTCCTATCGGCTGGAGCTGGAGGTGCCCCAGGCCCGGTTACTGGGACTGAACGAATTGGATGA
MLWHPSVVKPYLTLLAESSNPATLEGSAGSLQNLSAGNWKFAAYIRAAVRKEKGLPILVELLRMDNDRVVSSVATALRNMALDVRNKELIGKYAMRDLVNRLPGGNGPSVLSDETMAAICCALHEVTSKNMENAKALADSGGIEKLVNITKGRGDRSSLKVVKAAAQVLNTLWQYRDLRSIYKKDGWNQNHFITPVSTLERDRFKSHPSLSTTNQQMSPIIQSDGGELRVHPEEPVLSAGAGGAPGPVTGTERIG*
- Start: 804
- Stop: 28
- Length: 141
- Translation cycles: 1
GTGGAATCAGAACCATTTTATTACACCTGTGTCGACATTGGAGCGAGACCGATTCAAATCACATCCTTCCTTGTCTACCACCAACCAACAGATGTCACCCATCATTCAGTCAGACGGTGGAGAACTGCGTGTGCACCCTGA
VESEPFYYTCVDIGARPIQITSFLVYHQPTDVTHHSVRRWRTACAP*