CircID: TC-hsa-UBE4B_0121
CircRNA information
Taxonomy:
Genome Version:
hg38
Location:
chr1:10158356~10161286
Xref:
Evidences
| Ribosome/polysome profiling | 0.0 |
Evidence score: 1.960088
MS Q-Value:
|
| ORF | 1.0 | |
| IRES sequence | 0.30159 | |
| Translation initiation site | 0.0 | |
| SeqComp | 0.65849 | |
| m6A sites | 0.0 | |
| MS evidence | 0.0 |
Other evidences Upload
| File | Author | Date |
|---|
Structure
IRES
m6A
TIS
circRNA sequence
ATGTTGAGCATACCGGAGCCACCAGTGAGTTTTATGACAAGTTCACAATTCGCTATCATATTAGCACCATTTTTAAAAGCCTTTGGCAAAACATAGCTCACCATGGCACCTTTATGGAGGAGTTCAACTCCGGGAAGCAGTTTGTTCGCTATATAAACATGTTGATAAACGACACGACGTTTTTGCTCGATGAAAGTCTGGAGTCTCTGAAGCGAATCCATGAAGTGCAGGAAGAGATGAAGAACAAAGAACAGTGGGACCAGTTGCCCCGG
Exons
- exon1:10158356~10158482
- exon2:10161142~10161286
IRES sequence
- 10158413~10158418
- 10158427~10158432
- 10158444~10158450
- 10161164~10161174
- 10161179~10161184
- 10161253~10161258
circRNA specific ORFs
Attribute
ORF struct
circRNA sequence
Amino acid sequence
MS evidence
- Start: 254
- Stop: 96
- Length: 387
- Translation cycles: 2
GTGGGACCAGTTGCCCCGGATGTTGAGCATACCGGAGCCACCAGTGAGTTTTATGACAAGTTCACAATTCGCTATCATATTAGCACCATTTTTAAAAGCCTTTGGCAAAACATAGCTCACCATGGCACCTTTATGGAGGAGTTCAACTCCGGGAAGCAGTTTGTTCGCTATATAAACATGTTGATAAACGACACGACGTTTTTGCTCGATGAAAGTCTGGAGTCTCTGAAGCGAATCCATGAAGTGCAGGAAGAGATGAAGAACAAAGAACAGTGGGACCAGTTGCCCCGGATGTTGAGCATACCGGAGCCACCAGTGAGTTTTATGACAAGTTCACAATTCGCTATCATATTAGCACCATTTTTAAAAGCCTTTGGCAAAACATAG
- Start: 114
- Stop: 96
- Length: 255
- Translation cycles: 1