CircID: TC-hsa-VPS13D_0085

CircRNA information
Taxonomy:
Genome Version:
hg38 
Location:
chr1:12311507~12311925 
Gene:
Gene type:
protein_coding
Strand:
+
exons:
ORFS:
Evidences
Ribosome/polysome profiling 0.0
Evidence score: 2.041896
MS Q-Value:
ORF 1.0
IRES sequence 0.27503
Translation initiation site 0.0
SeqComp 0.76687
m6A sites 0.0
MS evidence 0.0
Other evidences Upload
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Structure
IRES
m6A
TIS
circRNA sequence
TCCACTGCTCTCTGGATCTGTATAAATACAAGCTGATCCGCGGCTTATTAGAGAACAACCTGGGAGAACCCATAGAGGAATTTATGCGGCCTTATGATTTACAAGATCCAAGAATTCATACTGTCCTGAGTGGAGAAGTGTACACCTGTATGTGCTTCCTCATTGATATGGTGAATGTAAGTCTGGAGCTTAAAGATCCAAAAAGAAAAGAAGGTGCTGGGTCCCTAGCCAG
Exons
  • exon1:12311507~12311625
  • exon2:12311813~12311925
IRES sequence
  • 12311527~12311537
  • 12311585~12311590
  • 12311616~12311816
  • 12311892~12311906
circRNA specific ORFs
Attribute
ORF struct
circRNA sequence
Amino acid sequence
MS evidence
  • Start: 84
  • Stop: 25
  • Length: 174
  • Translation cycles: 1
ATGCGGCCTTATGATTTACAAGATCCAAGAATTCATACTGTCCTGAGTGGAGAAGTGTACACCTGTATGTGCTTCCTCATTGATATGGTGAATGTAAGTCTGGAGCTTAAAGATCCAAAAAGAAAAGAAGGTGCTGGGTCCCTAGCCAGTCCACTGCTCTCTGGATCTGTATAA
MRPYDLQDPRIHTVLSGEVYTCMCFLIDMVNVSLELKDPKRKEGAGSLASPLLSGSV*