Variant "LTBP4:c.3311C>T(p.Thr1104Met)"
Search results: 2 records
Variant information
Gene:
Variant:
LTBP4:c.3311C>T(p.Thr1104Met) 
Genomic location:
chr19:41128309(hg19) 
HGVS:
SO Term RefSeq
protein_coding NM_001042544.1:c.3419C>T(p.Thr1140Met)
protein_coding NM_003573.2:c.3308C>T(p.Thr1103Met)
protein_coding NM_001042545.1:c.3218C>T(p.Thr1073Met)
Alias:
LTBP4:c.3419C>T(p.Thr1140Met) 
dbSNP ID:
rs10880  
GWAS trait:
no data 
Modifier statisitcs
Record:
Disorder:
Reference:
Effect type:
Expressivity(1) ,Penetrance(1)  
Modifier effect:
Altered incidence(1) ,Altered membrane damage and fibrosis(1)  
Details:
  • Target disease:
    Effect type:
    Penetrance 
    Modifier effect:
    Altered incidence 
    Evidence:
    Log-rank P=0.027 
    Effect:
    putative protective effect of DMD
    Alias in reference:
    LTBP4:c.3311C>T(p.Thr1104Met)
    Reference:
    Title:
    Genetic Modifiers of Duchenne Muscular Dystrophy and Dilated Cardiomyopathy
    Species studied:
    Human
    Abstract:
    OBJECTIVE: Dilated cardiomyopathy (DCM) is a major complication and leading cause of death in Duchenne muscular dystrophy (DMD). DCM onset is variable, suggesting modifier effects of genetic or environmental factors. We aimed to determine if polymorphisms previously associated with age at loss of independent ambulation (LoA) in DMD (rs28357094 in the SPP1 promoter, rs10880 and the VTTT/IAAM haplotype in LTBP4) also modify DCM onset.METHODS:A multicentric cohort of 178 DMD patients was genotyped by TaqMan assays. We performed a time-to-event analysis of DCM onset, with age as time variable, and finding of left ventricular ejection fraction < 50% and/or end diastolic volume > 70 mL/m2 as event (confirmed by a previous normal exam < 12 months prior); DCM-free patients were censored at the age of last echocardiographic follow-up.RESULTS:Patients were followed up to an average age of 15.9 ± 6.7 years. Seventy-one/178 patients developed DCM, and median age at onset was 20.0 years. Glucocorticoid corticosteroid treatment (n = 88 untreated; n = 75 treated; n = 15 unknown) did not have a significant independent effect on DCM onset. Cardiological medications were not administered before DCM onset in this population. We observed trends towards a protective effect of the dominant G allele at SPP1 rs28357094 and recessive T allele at LTBP4 rs10880, which was statistically significant in steroid-treated patients for LTBP4 rs10880 (< 50% T/T patients developing DCM during follow-up [n = 13]; median DCM onset 17.6 years for C/C-C/T, log-rank p = 0.027).CONCLUSIONS:We report a putative protective effect of DMD genetic modifiers on the development of cardiac complications, that might aid in risk stratification if confirmed in independent cohorts.
  • Target disease:
    Effect type:
    Expressivity 
    Modifier effect:
    Altered membrane damage and fibrosis 
    Evidence:
    From review article 
    Effect:
    Modifiers can alter strength and ambulation in muscular dystrophy
    Alias in reference:
    LTBP4:c.3419C>T(p.Thr1140Met)
    Reference:
    Title:
    Modifier genes and their effect on Duchenne muscular dystrophy.
    Species studied:
    Human
    Abstract:
    Recently, genetic pathways that modify the clinical severity of Duchenne muscular dystrophy (DMD) have been identified. The pathways uncovered as modifiers are useful to predict prognosis and also elucidate molecular signatures that can be manipulated therapeutically.