Variant "NOS1AP:n.162033890C>T"
Search results: 4 records
Variant information
Gene:
Variant:
NOS1AP:n.162033890C>T 
Genomic location:
chr1:162033890(hg19) 
HGVS:
SO Term RefSeq
OLFML2B-NOS1AP:n.162033890C>T
Alias:
NOS1AP:rs12143842 
dbSNP ID:
GWAS trait:
Modifier statisitcs
Record:
Disorder:
Reference:
Effect type:
Expressivity(4)  
Modifier effect:
Altered severity(2) ,Risk factor(2)  
Details:
  • Target disease:
    Long QT Syndrome (DOID_2843)
    Effect type:
    Expressivity 
    Modifier effect:
    Altered severity 
    Evidence:
    From review article 
    Effect:
    Increase QT symptoms
    Alias in reference:
    NOS1AP:n.162033890C>T
    Reference:
    Title:
    Modifier genes for sudden cardiac death.
    Species studied:
    Human
    Abstract:
    Genetic conditions, even those associated with identical gene mutations, can present with variable clinical manifestations. One widely accepted explanation for this phenomenon is the existence of genetic factors capable of modifying the consequences of disease-causing mutations (modifier genes). Here, we address the concepts and principles by which genetic factors may be involved in modifying risk for cardiac arrhythmia, then discuss the current knowledge and interpretation of their contribution to clinical heterogeneity. We illustrate these concepts in the context of two important clinical conditions associated with risk for sudden cardiac death including a monogenic disorder (congenital long QT syndrome) in which the impact of modifier genes has been established, and a complex trait (life-threatening arrhythmias in acute myocardial infarction) for which the search for genetic modifiers of arrhythmic risk is more challenging. Advances in understanding the contribution of modifier genes to a higher or lower propensity towards sudden death should improve patient-specific risk stratification and be a major step towards precision medicine.
  • Target disease:
    Long QT Syndrome (DOID_2843)
    Effect type:
    Expressivity 
    Modifier effect:
    Risk factor 
    Evidence:
    HR=10.15, 95% CI: (2.38, 43.34), q = 0.045 
    Effect:
    SNPs in NOS1AP and KCNQ1 are associated with an increased risk of cardiac events in LQTS patients
    Alias in reference:
    NOS1AP:n.162033890C>T
    Reference:
    Title:
    Single nucleotide polymorphisms in arrhythmia genes modify the risk of cardiac events and sudden death in long QT syndrome.
    Species studied:
    Human
    Abstract:
    Disease-modifying single nucleotide polymorphisms (SNPs) can help explain incomplete penetrance and variable expressivity in congenital long QT syndrome (LQTS) by altering susceptibility to arrhythmias.
  • Target disease:
    Long QT Syndrome (DOID_2843)
    Effect type:
    Expressivity 
    Modifier effect:
    Altered severity 
    Evidence:
    P=9.5×10(-8) 
    Effect:
    SNPs at NOS1AP (rs10494366, P=9.5×10(-8); rs12143842, P=4.8×10(-7); and rs2880058, P=8.6×10(-7)) were strongly associated with the QTc-interval with marked effects
    Alias in reference:
    NOS1AP:n.162033890C>T
    Reference:
    Title:
    Analysis for Genetic Modifiers of Disease Severity in Patients With Long-QT Syndrome Type 2.
    Species studied:
    Human
    Abstract:
    Considerable interest exists in the identification of genetic modifiers of disease severity in the long-QT syndrome (LQTS) as their identification may contribute to refinement of risk stratification.
  • Target disease:
    Long QT Syndrome (DOID_2843)
    Effect type:
    Expressivity 
    Modifier effect:
    Risk factor 
    Evidence:
    From review article 
    Effect:
    Risk factor
    Alias in reference:
    NOS1AP:rs12143842
    Reference:
    Title:
    Identification of a KCNQ1 polymorphism acting as a protective modifier against arrhythmic risk in long-QT syndrome.
    Species studied:
    Human
    Abstract:
    Long-QT syndrome (LQTS) is characterized by such striking clinical heterogeneity that, even among family members carrying the same mutation, clinical outcome can range between sudden death and no symptoms. We investigated the role of genetic variants as modifiers of risk for cardiac events in patients with LQTS.