系统分类
多序列联配
变异
论文
流行病学
病毒筛选
毒株信息
编号:
OEAV000012
发布时间:
2020-03-02
基因组完整性:
complete
病毒类型
RNA virus
毒株名称:
hCoV-19/Beijing/231/2020
毒株别名:
-
病毒说明:
hCoV-19/Beijing/231/2020
物种名称:
Severe acute respiratory syndrome coronavirus 2
物种ID:
2697049
属名:
Betacoronavirus
分类谱系:
[Viruses, Riboviria, Orthornavirae, Pisuviricota, Pisoniviricetes, Nidovirales, Cornidovirineae, Coronaviridae, Orthocoronavirinae, Betacoronavirus, Sarbecovirus, Severe acute respiratory syndrome-related coronavirus]
序列长度:
29903
有效碱基数量:
29903
有效碱基百分比:
100.00%
宿主:
Homo sapiens
宿主补充信息:
-
分离来源:
-
测序技术:
MGISEQ2000
组装方法:
IDBA v. 1.1.3
覆盖度:
-
相关链接:
EPI_ISL_413519
提交者:
Li,J., Li,L., Li,Z., Qiu,S., Song,H., Li,P. and Li,P.
提交者单位:
Infectious Disease Control Center, Center for Disease Control and Prevention of PLA
提交者地址:
Center for Disease Control and Prevention of PLA, 20 Dongda Street, Fengtai District, Beijing, Beijing 100071, China
样本信息
编号:
OESV000012
采样时间:
2020-01-28
采样地点:
Asia / China / Beijing
地点补充信息:
-
采样单位:
Infectious Disease Control Center, Center for Disease Control and Prevention of PLA
NC_045512.2:28144:
GTAACATTAGGGAGGACTTGAAAGAGCCACCACATTTTCACCGAGGCCACGCGGAGTACGATCGAGTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
->
GTAACATTAGGGAGGACTTGAAAGAGCCACCACATTTTCACCGAGGCCACGCGGAGTACGATCGAGTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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毒株也检测到该变异
virus id
virus name
host
country
Collection Date
OEAV000001
BetaCoV/Anhui/SZ005/2020