系统分类
多序列联配
变异
论文
流行病学
病毒筛选
毒株信息
编号:
OEAV000064
发布时间:
2020-02-19
基因组完整性:
complete
病毒类型
RNA virus
毒株名称:
hCoV-19/Fujian/8/2020
毒株别名:
-
病毒说明:
hCoV-19/Fujian/8/2020
物种名称:
Severe acute respiratory syndrome coronavirus 2
物种ID:
2697049
属名:
Betacoronavirus
分类谱系:
[Viruses, Riboviria, Orthornavirae, Pisuviricota, Pisoniviricetes, Nidovirales, Cornidovirineae, Coronaviridae, Orthocoronavirinae, Betacoronavirus, Sarbecovirus, Severe acute respiratory syndrome-related coronavirus]
序列长度:
29871
有效碱基数量:
29871
有效碱基百分比:
100.00%
宿主:
Homo sapiens
宿主补充信息:
-
分离来源:
-
测序技术:
Ion Torrent
组装方法:
CLCGenomicsWorkbench 11_0_64
覆盖度:
-
相关链接:
EPI_ISL_411060
提交者:
Chen Wei, Zhang Yanhua, He Wenxiang, Weng Yuwei
提交者单位:
Fujian Center for Disease Control and Prevention
提交者地址:
No.76 Jintai Road, Gulou District, 350001 Fuzhou, China
样本信息
编号:
OESV000064
采样时间:
2020-01-21
采样地点:
Asia / China / Fujian
地点补充信息:
-
宿主编号:
-
宿主性别:
Female
宿主年龄:
73
采样单位:
Fujian Center for Disease Control and Prevention
采样地址:
No.76 Jintai Road, Gulou District, 350001 Fuzhou, China
NC_045512.2:28144:
GTAACATTAGGGAGGACTTGAAAGAGCCACCACATTTTCACCGAGGCCACGCGGAGTACGATCGAGTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
->
GTAACATTAGGGAGGACTTGAAAGAGCCACCACATTTTCACCGAGGCCACGCGGAGTACGATCGAGTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
×
以下
30
毒株也检测到该变异
virus id
virus name
host
country
Collection Date
OEAV000001
BetaCoV/Anhui/SZ005/2020