系统分类
多序列联配
变异
论文
流行病学
病毒筛选
毒株信息
编号:
OEAV000207
发布时间:
2020-02-09
基因组完整性:
complete
病毒类型
RNA virus
毒株名称:
hCoV-19/Taiwan/NTU01/2020
毒株别名:
-
病毒说明:
hCoV-19/Taiwan/NTU01/2020
物种名称:
Severe acute respiratory syndrome coronavirus 2
物种ID:
2697049
属名:
Betacoronavirus
分类谱系:
[Viruses, Riboviria, Orthornavirae, Pisuviricota, Pisoniviricetes, Nidovirales, Cornidovirineae, Coronaviridae, Orthocoronavirinae, Betacoronavirus, Sarbecovirus, Severe acute respiratory syndrome-related coronavirus]
序列长度:
29473
有效碱基数量:
29472
有效碱基百分比:
100.00%
宿主:
Homo sapiens
宿主补充信息:
Tourist from Wuhan, China
分离来源:
Sputum
测序技术:
Sanger
组装方法:
-
覆盖度:
-
相关链接:
EPI_ISL_408489
提交者:
Shiou-Hwei Yeh, You-Yu Lin, Ya-Yun Lai, Chiao-Ling Li, Shan-Chwen Chang, Pei-Jer Chen, Sui-Yuan Chang
提交者单位:
Microbial Genomics Core Lab, National Taiwan University Centers of Genomic and Precision Medicine
提交者地址:
No. 2, Xuzhou Road, Zhongzheng District, Taipei 10055, Taiwan
样本信息
编号:
OESV000207
采样时间:
2020-01-31
采样地点:
Asia / Taiwan / Taipei
地点补充信息:
-
宿主编号:
-
宿主性别:
Female
宿主年龄:
50
采样单位:
Department of Laboratory Medicine, National Taiwan University Hospital
采样地址:
No.7, Chung Shan S. Rd., Taipei 10002, Taiwan
NC_045512.2:28144:
GTAACATTAGGGAGGACTTGAAAGAGCCACCACATTTTCACCGAGGCCACGCGGAGTACGATCGAGTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
->
GTAACATTAGGGAGGACTTGAAAGAGCCACCACATTTTCACCGAGGCCACGCGGAGTACGATCGAGTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
×
以下
30
毒株也检测到该变异
virus id
virus name
host
country
Collection Date
OEAV000001
BetaCoV/Anhui/SZ005/2020