系统分类
多序列联配
变异
论文
流行病学
病毒筛选
毒株信息
编号:
OEAV000252
发布时间:
2020-01-10
基因组完整性:
complete
病毒类型
RNA virus
毒株名称:
hCoV-19/Wuhan/IVDC-HB-05/2019
毒株别名:
-
病毒说明:
hCoV-19/Wuhan/IVDC-HB-05/2019
物种名称:
Severe acute respiratory syndrome coronavirus 2
物种ID:
2697049
属名:
Betacoronavirus
分类谱系:
[Viruses, Riboviria, Orthornavirae, Pisuviricota, Pisoniviricetes, Nidovirales, Cornidovirineae, Coronaviridae, Orthocoronavirinae, Betacoronavirus, Sarbecovirus, Severe acute respiratory syndrome-related coronavirus]
序列长度:
29891
有效碱基数量:
29891
有效碱基百分比:
100.00%
宿主:
Homo sapiens
宿主补充信息:
-
分离来源:
Alveolar lavage fluid
测序技术:
-
组装方法:
-
覆盖度:
-
相关链接:
EPI_ISL_402121
提交者:
Wenjie Tan,Xuejun Ma,Xiang Zhao,Wenling Wang,Yongzhong Jiang,Roujian Lu,Ji Wang,Peihua Niu, Weimin Zhou, Faxian Zhan,Weifeng Shi,Baoying Huang,Jun Liu,Li Zhao,Yao Meng,Fei Ye,Na Zhu, Xiaozhou He,Peipei Liu, Yang Li,Jing Chen,Wenbo Xu,George F. Gao,Guizhen Wu
提交者单位:
National Institute for Viral Disease Control and Prevention, China CDC
提交者地址:
155 Changbai Road, Changping District, Beijing 102206 China
样本信息
编号:
OESV000252
采样时间:
2019-12-30
采样地点:
Asia / China / Hubei / Wuhan
地点补充信息:
-
宿主编号:
-
宿主性别:
Male
宿主年龄:
32
采样单位:
National Institute for Viral Disease Control and Prevention, China CDC
采样地址:
155 Changbai Road, Changping District, Beijing 102206 China
NC_045512.2:28144:
GTAACATTAGGGAGGACTTGAAAGAGCCACCACATTTTCACCGAGGCCACGCGGAGTACGATCGAGTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
->
GTAACATTAGGGAGGACTTGAAAGAGCCACCACATTTTCACCGAGGCCACGCGGAGTACGATCGAGTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
×
以下
30
毒株也检测到该变异
virus id
virus name
host
country
Collection Date
OEAV000001
BetaCoV/Anhui/SZ005/2020