系统分类
多序列联配
变异
论文
流行病学
病毒筛选
毒株信息
编号:
OEAV013388
发布时间:
2019-03-27
基因组完整性:
complete
病毒类型
RNA viruses
毒株名称:
Bat coronavirus BtCoV/Rh/YN2012 isolate BtCoV/Rh/YN2012_Rs3376
毒株别名:
-
病毒说明:
Bat coronavirus BtCoV/Rh/YN2012 isolate BtCoV/Rh/YN2012_Rs3376, complete genome
物种名称:
Bat coronavirus
物种ID:
1508220
属名:
-
分类谱系:
[root, Viruses, Riboviria, Nidovirales, Cornidovirineae, Coronaviridae, Coronavirinae, unclassified Coronavirinae, Bat coronavirus]
序列长度:
29102
有效碱基数量:
29102
有效碱基百分比:
100.00%
宿主:
-
宿主补充信息:
-
分离来源:
-
测序技术:
Illumina; Sanger dideoxy sequencing
组装方法:
Lasergene Seqman v. 7.0
覆盖度:
-
相关链接:
MG916901
提交者:
Wang,N., Luo,C.-M., Liu,H.-Z., Yang,X.-L., Hu,B., Zhang,W., Li,B., Zhu,Y., Zhu,G.-J., Shen,X.-R., Peng,C. and Shi,Z.-L.
提交者单位:
Wuhan Institute of Virology
提交者地址:
Chinese Academy of Sciences, Xiao Hong Shan 44, Room 211, Wuchang District, wuhan, hubei 430071, China
样本信息
编号:
OESV013388
采样时间:
2012-05-19
病毒注释
NC_045512.2:28144:
GTAACATTAGGGAGGACTTGAAAGAGCCACCACATTTTCACCGAGGCCACGCGGAGTACGATCGAGTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
->
GTAACATTAGGGAGGACTTGAAAGAGCCACCACATTTTCACCGAGGCCACGCGGAGTACGATCGAGTGTACAGTGAACAATGCTAGGGAGAGCTGCCTATATGGAAGAGCCCTAATGTGTAAAATTAATTTTAGTAGTGCTATCCCCATGTGATTTTAATAGCTTCTTAGGAGAATGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
×
以下
30
毒株也检测到该变异
virus id
virus name
host
country
Collection Date
OEAV000001
BetaCoV/Anhui/SZ005/2020